BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015765
(401 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449454724|ref|XP_004145104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449471723|ref|XP_004153390.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449530564|ref|XP_004172264.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/406 (60%), Positives = 309/406 (76%), Gaps = 7/406 (1%)
Query: 1 MALLYRLRTNF--NLKTVNYR-NLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFR 57
MALLYRLR+ F N +NYR + + S + + D + L+ K+K RA ++ LK+E NP R
Sbjct: 1 MALLYRLRSAFPSNSTYINYRLHYRSLSTILSPDSSNPLSAKQKSRAALSLLKTEENPER 60
Query: 58 ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
I+DIC ASL PE LDR+AFS+A+SKLS+ HF+ I + LEELK+RPDL+ NERF H+
Sbjct: 61 IIDICRAASLTPEFHLDRIAFSVAISKLSKFKHFDGIRRFLEELKSRPDLK-NERFACHA 119
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IVLYGQANM+DHA++TF+++D+ G+R SV LNALL C L+K+Y+E+KR++ EFPK+YG
Sbjct: 120 IVLYGQANMLDHAIRTFKQIDELGVRHSVKTLNALLFACNLAKDYKELKRVYMEFPKIYG 179
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
IEP+ +TYN+VIK+F ESG SSSV SI+AEM RK ++PNAT F LAG Y E K+EDV
Sbjct: 180 IEPDIDTYNRVIKAFSESGSSSSVSSIVAEMDRKDVKPNATTFANWLAGCYMEEKFEDVE 239
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
KVL +MEK G+ GV YN RI+SLCKLKRS EAKAL DGMLSRG+ PN TY LIHGF
Sbjct: 240 KVLNLMEKYGVRRGVATYNARIRSLCKLKRSTEAKALFDGMLSRGMDPNSVTYCELIHGF 299
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KEGNL+ AK +F M N GC+PDS C+F TYFLC+GG+YETA K+C SM KGWVP+F
Sbjct: 300 CKEGNLDEAKSIFKRMINSGCQPDSECYFTLTYFLCRGGDYETAFKICLESMKKGWVPNF 359
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
STMKSLV GL SISKV EA +LIG +K+RF K+ + W+ A LP+
Sbjct: 360 STMKSLVDGLVSISKVEEAKQLIGQIKERFSKNVEKWSEIEAGLPQ 405
>gi|147767812|emb|CAN77919.1| hypothetical protein VITISV_027645 [Vitis vinifera]
Length = 396
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/403 (59%), Positives = 303/403 (75%), Gaps = 10/403 (2%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILD 60
MA L RLR ++R SS+LS D A L+ KEK RA ++ LKSE +P RIL+
Sbjct: 1 MAFLSRLRP-----ISSHRCRFFSSILSP-DSATPLSSKEKSRAALSLLKSEQDPQRILE 54
Query: 61 ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL 120
IC A+L PES LDR+AFS+A+SKL+ + HF++I L+ELK RPDLR ERF H+IVL
Sbjct: 55 ICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLR-TERFVSHAIVL 113
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+GQA M++ A++TFE+M + G+ ++V +LNALL CIL+KNY+E RIF EFPK YGIE
Sbjct: 114 FGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIEL 173
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N ++YN V+K+F ESG SSS YSILAEM RK ++PNAT FG+LLAGFY E KYEDVGKVL
Sbjct: 174 NLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVL 233
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+MME+ + G++ YNIRIQSLCKLK+S EAKALLDG+L+R +KPN +TY HLIHGF KE
Sbjct: 234 KMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKE 293
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GNL+ AKKLF M N GC+PDS C+F YFLCQGG++E+AL+ C+ M KGW P+ STM
Sbjct: 294 GNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTM 353
Query: 361 KSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
SLV GL SISKV EA ELIG +K++F ++ D WN A LP+
Sbjct: 354 TSLVNGLVSISKVEEAQELIGQIKEKFSRNVDKWNEIEAGLPQ 396
>gi|359494840|ref|XP_003634851.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Vitis vinifera]
Length = 396
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/403 (59%), Positives = 303/403 (75%), Gaps = 10/403 (2%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILD 60
MA L RLR ++R SS+LS D A L+ KEK RA ++ LKSE +P RIL+
Sbjct: 1 MAFLSRLRP-----ISSHRCRFFSSILSP-DSATPLSSKEKSRAALSLLKSEQDPQRILE 54
Query: 61 ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL 120
IC A+L PES LDR+AFS+A+SKL+ + HF++I L+ELK RPDLR ERF H+IVL
Sbjct: 55 ICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLR-TERFVSHAIVL 113
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+GQA M++ A++TFE+M + G+ ++V +LNALL CIL+KNY+E RIF EFPK YGIE
Sbjct: 114 FGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIEL 173
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N ++YN V+K+F ESG SSS YSILAEM RK ++PNAT FG+LLAGFY E KYEDVGKVL
Sbjct: 174 NLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVL 233
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+MME+ + G++ YNIRIQSLCKLK+S EAKALLDG+L+R +KPN +TY HLIHGF KE
Sbjct: 234 KMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKE 293
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GNL+ AKKLF M N GC+PDS C+F YFLCQGG++E+AL+ C+ M KGW P+ STM
Sbjct: 294 GNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTM 353
Query: 361 KSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
SLV GL SISKV EA ELIG +K++F ++ D WN A LP+
Sbjct: 354 TSLVNGLVSISKVEEARELIGQIKEKFSRNVDKWNEIEAGLPQ 396
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/409 (54%), Positives = 306/409 (74%), Gaps = 10/409 (2%)
Query: 1 MALLYRLRTNFNL-----KTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNP 55
MALL R+R++ +L + R+L+++S + + D LT KEK +A ++ LKSE +P
Sbjct: 1 MALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDP 60
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEE-LKTRPDLRQNERFH 114
RIL+IC ASL P+ +DR+AFS AV L++ HF+A+S LL+ ++ RPDL+ +ERF
Sbjct: 61 DRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLK-SERFA 119
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
H+IVLY QANM+DH+++ F +++K+ + ++V +LNALL C+++K+Y+E KR++ E PK
Sbjct: 120 AHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPK 179
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+YGIEP+ ETYN++IK FCESG +SS YSI+AEM RK I+PN++ FGL+++GFY E K +
Sbjct: 180 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+VGKVL MM+ G+ GV+ YNIRIQSLCK K+S+EAKALLDGMLS G+KPN TY HLI
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
HGF E + E AKKLF M N GC+PDS C+F Y+LC+GG++ETAL +C+ SM K WV
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
P FS MKSLV GLA SKV EA ELIG +K++F ++ ++WN AALP+
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408
>gi|255554937|ref|XP_002518506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542351|gb|EEF43893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 397
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/409 (57%), Positives = 298/409 (72%), Gaps = 21/409 (5%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILD 60
MAL +RLR + +K R +T+ L S KE+ RA I+ LKSE NP +I++
Sbjct: 1 MALFFRLRIHSLIKV--RREFSTTPLSS----------KERTRAAISLLKSEENPQKIIE 48
Query: 61 ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK-TRPDLRQNERFHVHSIV 119
IC ASL PE+ LDR+AFS+A++KLS++N+F+ I Q L++L+ +RPDLR +ERF H+IV
Sbjct: 49 ICNSASLTPEAHLDRIAFSVAITKLSKSNNFSFIQQFLDDLRVSRPDLRTSERFAAHAIV 108
Query: 120 LYGQANMIDHAMQTFEE--MDKYGL--RQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
L+GQA M+DHA++TF+E D GL SV NALL C L+K+Y EVKR+F EFPK
Sbjct: 109 LFGQAAMVDHAVRTFKEYHTDVIGLGNNGSVKVFNALLFACYLAKDYSEVKRVFLEFPKN 168
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
Y IEPN ++YN VIKSFC+S SSS +S+LAEM RK ++PNAT FG LLAGFYKE KYED
Sbjct: 169 YNIEPNLDSYNTVIKSFCDSESSSSGFSVLAEMDRKRLKPNATTFGHLLAGFYKEEKYED 228
Query: 236 VGKVLQMM-EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
VGKVL+MM +K GI GV+ YNIRIQSLCKLK+S EAKALLDGMLSR +KPN TY HLI
Sbjct: 229 VGKVLEMMKDKYGIRPGVSTYNIRIQSLCKLKKSAEAKALLDGMLSRQMKPNSVTYAHLI 288
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
HGF EG+LEG K+LF M N G +PDS C+F ++LC+G ++ETAL++C+ S+ K WV
Sbjct: 289 HGFCNEGDLEGGKRLFKDMVNRGYQPDSACYFTLLHYLCKGQDFETALRICKESIGKDWV 348
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMW---NAALPR 400
P+ +TMKSLV GLA I KV EA ELI +K++F K+ W A LPR
Sbjct: 349 PNIATMKSLVNGLAGIGKVDEAKELIAKIKEKFTKNVSTWEEIEAGLPR 397
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/409 (53%), Positives = 304/409 (74%), Gaps = 10/409 (2%)
Query: 1 MALLYRLRTNFNL-----KTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNP 55
MALL R+R++ +L + R+L+++S + + D LT KEK +A ++ LKSE +P
Sbjct: 1 MALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDP 60
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEE-LKTRPDLRQNERFH 114
RIL+IC ASL P+ +DR+AFS AV L++ HF+A+S LL+ ++ R DL+ +ERF
Sbjct: 61 DRILEICRAASLTPDCHIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRQDLK-SERFA 119
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
H+IVLY QANM+DH+++ F +++K+ + ++V +LNALL C+++K+Y+E KR++ E PK
Sbjct: 120 AHAIVLYAQANMLDHSLRVFRDLEKFEIPRTVKSLNALLFACLVAKDYKEAKRVYIEMPK 179
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+YGIEP+ ETYN++IK FCESG +SS YSI+AEM RK I+PN++ FGL+++GFY E K +
Sbjct: 180 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYSEDKND 239
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+VGKVL MM+ G+ GV+ YNIRIQSLCK K+S+EAKALLDGMLS G+KPN TY HLI
Sbjct: 240 EVGKVLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
GF E + E AKKLF M N GC+PDS C+F Y+LC+GG++ETAL +C+ SM K WV
Sbjct: 300 RGFCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALVLCKESMEKNWV 359
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
P FS MKSLV GLA SKV EA ELIG +K++F ++ ++WN AALP+
Sbjct: 360 PSFSIMKSLVNGLAKDSKVDEAKELIGQVKEKFTRNVELWNEVEAALPQ 408
>gi|21553755|gb|AAM62848.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 407
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/408 (53%), Positives = 302/408 (74%), Gaps = 9/408 (2%)
Query: 1 MALLYRLRTNFNL-----KTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNP 55
MALL R+R++ +L + R+L+++S + A D LT KEK +A ++ LKSE +P
Sbjct: 1 MALLSRIRSSTSLFRYLNASPQIRSLSSASTILAPDSKTPLTSKEKSKAALSLLKSEKDP 60
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
RIL+IC ASL P+ +DR+AFS AV L++ NHF+A+S LL+ L+ +ERF
Sbjct: 61 DRILEICRAASLTPDCHIDRIAFSAAVENLAEKNHFSAVSNLLDGFIENRHLK-SERFAA 119
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
H+IVLY QANM+DH+++ F +++K+ + ++V +LNALL C+++K+Y+E KR++ E PK+
Sbjct: 120 HAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKM 179
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
YGIEP+ ETYN++IK FCESG +SS YSI+AEM RK I+PN++ FGL+++GFY E K ++
Sbjct: 180 YGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDE 239
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
VGKVL MM+ G+ GV+ YNIRIQSLCK K+S+EAKALLDGMLS G+KPN TY HLIH
Sbjct: 240 VGKVLAMMKARGVNIGVSTYNIRIQSLCKKKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 299
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GF E + E AKKLF M N GC+PDS C+F Y+LC+GG++ETAL +C+ SM K WVP
Sbjct: 300 GFCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 359
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
FS MKSLV GLA SKV EA ELIG +K++F ++ ++WN AALP+
Sbjct: 360 SFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 407
>gi|356555650|ref|XP_003546143.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Glycine max]
Length = 388
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/385 (55%), Positives = 280/385 (72%), Gaps = 7/385 (1%)
Query: 19 RNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAF 78
R+ +T+S+LS + + LT K+K R+ I LKSE+NP RILDIC A+L P+S +DR AF
Sbjct: 8 RHYSTTSILSP-NSSTPLTSKQKTRSAIHLLKSETNPERILDICRAAALTPDSHIDRRAF 66
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
S+AVSKL+ A+HF I L++LKTRPDLR NE+F H+IVLYGQANM+DHA++TF E
Sbjct: 67 SLAVSKLAAAHHFAGIRTFLDDLKTRPDLR-NEKFLSHAIVLYGQANMLDHAIRTFTE-- 123
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+SV LN+LL +L+KNY+E+ RI+ EFPK Y I+PN +TYN VIK+F ESG +
Sbjct: 124 DLPSPRSVKTLNSLLFAALLAKNYKELTRIYLEFPKTYSIQPNLDTYNTVIKAFAESGST 183
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
SSVYS+LAEM + +I PN T L+GFY+E K++DVGKVL++MEK + ++ YN+R
Sbjct: 184 SSVYSVLAEMDKNNIAPNVTTLNNSLSGFYREKKFDDVGKVLKLMEKYSVFPSISTYNVR 243
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
IQSLCKLKRS EAKALL+GM+ G KPN +Y LIHGF KEG+LE AK+LF M G
Sbjct: 244 IQSLCKLKRSSEAKALLEGMVCNGRKPNSVSYACLIHGFCKEGDLEEAKRLFRDMKRRGY 303
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
PD C+F +FLC GGE+E AL+V + M KGWVP+F+TMKSLV GLA KV EA E
Sbjct: 304 LPDGECYFTLVHFLCCGGEFEAALEVAKECMGKGWVPNFTTMKSLVNGLAGALKVDEAKE 363
Query: 379 LIGLMKKRFPKSGDMWN---AALPR 400
+I +K++F +SGD W+ A LP+
Sbjct: 364 VIKQIKEKFAESGDKWDEIEAGLPQ 388
>gi|297849542|ref|XP_002892652.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338494|gb|EFH68911.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 403
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/406 (50%), Positives = 293/406 (72%), Gaps = 9/406 (2%)
Query: 1 MALLYRLRTNFNL-KTVNYRNLATSSLLSAGDEAAALTIKEKK-RATIARLKSESNPFRI 58
MA L+R+RT+ +L + V L +SS S+ +LT K+KK RAT++ LKSE+NP RI
Sbjct: 1 MAFLFRIRTSESLVQNVTQFRLQSSS--SSIFTLNSLTSKQKKSRATLSLLKSENNPNRI 58
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEE-LKTRPDLRQNERFHVHS 117
L+IC ASL P+ +DR+ FS+AV L++ HF A+SQLL+ ++ +PD + +E F V +
Sbjct: 59 LEICRSASLTPDYHVDRIIFSVAVVTLAKEKHFVAVSQLLDGFIQNQPDPK-SESFAVRA 117
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I+LYG+ANM+D ++QTF ++++Y + ++V +LNALL C+++K+Y+E R++ E PK+YG
Sbjct: 118 IILYGRANMLDRSIQTFRDLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG 177
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
IEP+ ETYN++I+ CESG +S YSI+AEM RK ++P A+ FGL++ GFYKE K++DV
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSLSYSIVAEMERKWVKPTASSFGLMIDGFYKEEKFDDVR 237
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
KV++MM++ G+ GV YNI IQ LCK K+S EAKAL+DG++S ++PN TY LIHGF
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
E NL+ A LF M G +PDS C+F LC+GG++ETAL +CR SM K WVP F
Sbjct: 298 CSEENLDEAMNLFEVMVYSGYKPDSECYFTLIRCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
S MK LV GLAS+SKV EA ELI +K++F ++ D+WN AALP+
Sbjct: 358 SIMKWLVNGLASVSKVDEAKELIAQVKEKFTRNVDLWNEVEAALPQ 403
>gi|15221069|ref|NP_172629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200551|sp|Q9SAB4.1|PPR33_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g11630, mitochondrial; Flags: Precursor
gi|4835794|gb|AAD30260.1|AC007296_21 Strong similarity to gi|3367521 F8K4.8 from Arabidopsis thaliana
BAC gb|AC004392 [Arabidopsis thaliana]
gi|14326576|gb|AAK60332.1|AF385742_1 At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|19548051|gb|AAL87389.1| At1g11630/F25C20_22 [Arabidopsis thaliana]
gi|21593339|gb|AAM65288.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|332190642|gb|AEE28763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/405 (50%), Positives = 290/405 (71%), Gaps = 9/405 (2%)
Query: 1 MALLYRLRTN-FNLKTVNYRNLATSSLLSAGDEAAALTIKEKK-RATIARLKSESNPFRI 58
MA L+R+RT+ F L+ L +SS S+ +LT K+KK R T++ LKSE+NP RI
Sbjct: 1 MAFLFRIRTSEFILQKATQFRLKSSS--SSIFTLKSLTSKQKKSRDTLSLLKSENNPDRI 58
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEE-LKTRPDLRQNERFHVHS 117
L+IC SL+P+ +DR+ FS+AV L++ HF A+SQLL+ ++ +PD ++E F V +
Sbjct: 59 LEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPD-PKSESFAVRA 117
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I+LYG+ANM+D ++QTF +++Y + ++V +LNALL C+++K+Y+E R++ E PK+YG
Sbjct: 118 IILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG 177
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
IEP+ ETYN++I+ CESG +SS YSI+AEM RK I+P A FGL++ GFYKE K+++V
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
KV++MM++ G+ GV YNI IQ LCK K+S EAKAL+DG++S ++PN TY LIHGF
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
E NL+ A LF M G +PDS C+F + LC+GG++ETAL +CR SM K WVP F
Sbjct: 298 CSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSF 357
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALP 399
S MK LV GLAS SKV EA ELI ++K++F ++ D+WN AALP
Sbjct: 358 SVMKWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402
>gi|297741760|emb|CBI32989.3| unnamed protein product [Vitis vinifera]
Length = 412
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/403 (52%), Positives = 265/403 (65%), Gaps = 57/403 (14%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILD 60
MA L RLR ++R SS+LS D A L+ KEK RA ++ LKSE +P RIL+
Sbjct: 64 MAFLSRLRP-----ISSHRCRFFSSILSP-DSATPLSSKEKSRAALSLLKSEQDPQRILE 117
Query: 61 ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL 120
IC A+L PES LDR
Sbjct: 118 ICRAAALTPESHLDR--------------------------------------------- 132
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
A M++ A++TFE+M + G+ ++V +LNALL CIL+KNY+E RIF EFPK YGIE
Sbjct: 133 ---AGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIEL 189
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N ++YN V+K+F ESG SSS YSILAEM RK ++PNAT FG+LLAGFY E KYEDVGKVL
Sbjct: 190 NLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGKVL 249
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+MME+ + G++ YNIRIQSLCKLK+S EAKALLDG+L+R +KPN +TY HLIHGF KE
Sbjct: 250 KMMEEYKMQPGISTYNIRIQSLCKLKKSSEAKALLDGILARRMKPNSETYCHLIHGFCKE 309
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GNL+ AKKLF M N GC+PDS C+F YFLCQGG++E+AL+ C+ M KGW P+ STM
Sbjct: 310 GNLDEAKKLFKDMVNRGCKPDSDCYFTLVYFLCQGGDFESALRFCKECMEKGWFPNISTM 369
Query: 361 KSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
SLV GL SISKV EA ELIG +K++F ++ D WN A LP+
Sbjct: 370 TSLVNGLVSISKVEEARELIGQIKEKFSRNVDKWNEIEAGLPQ 412
>gi|224113615|ref|XP_002316521.1| predicted protein [Populus trichocarpa]
gi|222859586|gb|EEE97133.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/412 (52%), Positives = 277/412 (67%), Gaps = 23/412 (5%)
Query: 1 MALLYRLRTNFN-LKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRIL 59
MAL RLR L ++ N +TS L S AAL++ LKSE+NP +IL
Sbjct: 1 MALFARLRLRLQFLHLRHHINFSTSPLSSKSKTCAALSL----------LKSETNPEKIL 50
Query: 60 DICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT-RPDLRQNERFHVHSI 118
+IC A L P + +DR+ FS+A+ KL+++N+F+ I L +L+T RPDLR RF HSI
Sbjct: 51 EICRSACLTPYAHIDRITFSVAIDKLAKSNNFSYIDDFLTDLRTSRPDLR-TVRFAAHSI 109
Query: 119 VLYGQANMIDHAMQTFEEM------DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+LYGQA MID A++ F+E D SV LNALL CIL+K Y+EV R+F +F
Sbjct: 110 ILYGQAGMIDQAIRLFKEYHEKNQNDVVLTSGSVKLLNALLFSCILAKKYDEVNRVFVDF 169
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K Y IEPN ET+N VI+SFCESG SSS YS+L EM K ++PN T FG L AGFY+E K
Sbjct: 170 SKRYKIEPNLETFNTVIQSFCESGSSSSCYSVLNEMDMKGVKPNETTFGHLFAGFYREEK 229
Query: 233 YEDVGKVLQMMEK-CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
YEDVG V +M+E+ GI++G+ VYNIRI SLCKLKR+ EA LL+G LS+GI PN TY
Sbjct: 230 YEDVGTVSKMIEEDYGISAGIGVYNIRIHSLCKLKRAREANVLLEGCLSKGITPNGVTYS 289
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
HLI GF EG+LE AK+LF SM N GC+P C+ YFL +GG++E+A +VC+ SM K
Sbjct: 290 HLILGFCMEGDLEEAKRLFKSMENRGCQPAYSCYATLVYFLGKGGDFESAYRVCKESMGK 349
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
VP+FSTMK LV GLAS +V +A ELIG +K+RF K+ ++WN A LP+
Sbjct: 350 KMVPNFSTMKILVQGLASSGEVDKAKELIGEVKERFSKNIELWNEVEAGLPQ 401
>gi|227463008|gb|ACP39956.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463010|gb|ACP39957.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 337
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 193/332 (58%), Positives = 241/332 (72%), Gaps = 5/332 (1%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILD 60
MAL R+RT+ + + R S+LSA D L+ +K RA + LKSE NP RIL+
Sbjct: 1 MALFSRIRTSATAASFHLRRF---SILSA-DSPTPLSAHQKTRAALCLLKSEQNPDRILN 56
Query: 61 ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL 120
IC ASL P LDR+AFS+A+SKLS+ NHF +I L EL +RPDL Q+ERF HS++L
Sbjct: 57 ICRAASLTPTFHLDRIAFSVAISKLSEGNHFQSIDTFLRELNSRPDL-QHERFVSHSLIL 115
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YGQA M++HA+ TF+E G +S +LNALL+ IL+K+Y+E KRIF EFPK YGIEP
Sbjct: 116 YGQAKMLNHALTTFDEFYNKGYCRSTKSLNALLVAAILAKDYKEAKRIFVEFPKRYGIEP 175
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N ETYN IK+ CESG SSSVYSIL +M+ K I+PNAT FG LLAGFY E KYEDVGKVL
Sbjct: 176 NLETYNTAIKALCESGSSSSVYSILVDMKSKGIKPNATTFGTLLAGFYAEEKYEDVGKVL 235
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+M++ G++ GV+ YNIRI+SLC LK+S EAKALLDGMLS+GI PN TY HLI+G +
Sbjct: 236 NLMKEHGVSVGVSTYNIRIRSLCMLKKSNEAKALLDGMLSKGIMPNSATYNHLIYGXCRG 295
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
GNL AKK+F +M N G EP+S+C+F YFL
Sbjct: 296 GNLGEAKKVFKNMVNKGFEPESHCYFTLWYFL 327
>gi|20146263|dbj|BAB89045.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|20160842|dbj|BAB89782.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|215700983|dbj|BAG92407.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 390
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/405 (42%), Positives = 246/405 (60%), Gaps = 20/405 (4%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKS--ESNPFRI 58
MA R L T S+L+ + LT ++K R I+ LKS P +I
Sbjct: 1 MAAAVRRLLRRGLSTATAPPPTPGSILNPSSPSTPLTSRQKSRLAISLLKSTPPPPPDQI 60
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSI 118
L IC A+L+P+S LDR+A S+A SKLS A +++ L L T H+I
Sbjct: 61 LSICRAAALSPDSHLDRVALSLAASKLSSAP--DSVRDLASSLLT-------PHHAPHAI 111
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
L+GQA ++ A+ TF+ S +LNALL C++S N+ E R+F FP Y +
Sbjct: 112 ALFGQAGLLPDAVSTFKS------SPSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSV 165
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN++T+N +IKSF ESG + S YS+L EM +K ++PNAT F +AGFYKE +++DVGK
Sbjct: 166 KPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVGK 225
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V+++M+K G + V+N+R+Q LCKL RS +AKALL+ M+ +G KP+ TY HLIHGF
Sbjct: 226 VIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFC 285
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KEG+LE AK+L+ M G DS ++M Y+LC+GG+++TA+ V A+ WVP FS
Sbjct: 286 KEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFS 345
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNA---ALPR 400
TMK LV GLA S+V EA +I MK++FP + W ALP+
Sbjct: 346 TMKMLVNGLAGSSRVDEAKGIIEKMKEKFPDKAEGWKEVEDALPQ 390
>gi|125528002|gb|EAY76116.1| hypothetical protein OsI_04043 [Oryza sativa Indica Group]
Length = 390
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/381 (44%), Positives = 242/381 (63%), Gaps = 20/381 (5%)
Query: 25 SLLSAGDEAAALTIKEKKRATIARLKSESNPF--RILDICCGASLAPESPLDRMAFSIAV 82
S+L+ + LT ++K R I+ LKS +P +IL IC A+L+P+S LDR+A S+A
Sbjct: 25 SILNPSSPSTPLTSRQKSRLAISLLKSTPSPPPDQILSICRAAALSPDSHLDRVALSLAA 84
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGL 142
SKLS A +++ L L T H+I L+GQA ++ A+ TF+
Sbjct: 85 SKLSSAP--DSVRDLASSLLT-------PHHAPHAIALFGQAGLLPDAVSTFKS------ 129
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
S +LNALL C++S N+ E R+F FP Y ++PN++T+N +IKSF ESG + S Y
Sbjct: 130 SPSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFY 189
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
S+L EM +K ++PNAT F +AGFYKE +++DVGKV+++M+K G + V+N+R+Q L
Sbjct: 190 SVLDEMCKKGVKPNATTFTTAIAGFYKEERFDDVGKVIELMKKHGCGESLPVFNVRVQGL 249
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CKL RS +AKALL+ M+ +G KP+ TY HLIHGF KEG+LE AK+L+ M G DS
Sbjct: 250 CKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDS 309
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
++M Y+LC+GG+++TA+ V A+ WVP FSTMK LV GLA S+V EA +I
Sbjct: 310 SFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEK 369
Query: 383 MKKRFPKSGDMWNA---ALPR 400
MK++FP + W ALP+
Sbjct: 370 MKEKFPDKAEGWKEVEDALPQ 390
>gi|242054647|ref|XP_002456469.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
gi|241928444|gb|EES01589.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
Length = 392
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 172/380 (45%), Positives = 237/380 (62%), Gaps = 20/380 (5%)
Query: 25 SLLSAGDEAAALTIKEKKRATIARLKSESNPF--RILDICCGASLAPESPLDRMAFSIAV 82
S+L+ + LT +EK R I+ LKS P +IL IC A+L PE+ +DR+A S+A
Sbjct: 27 SILNPSSPSTPLTSREKTRLAISLLKSSPPPPPDQILSICRAAALTPETHIDRIALSLAA 86
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGL 142
SKLS A + L+ R H+IVL+GQAN++ A+ TF+
Sbjct: 87 SKLSSAP---------DTLRDLASTVLTPRHAPHAIVLFGQANLLPDAISTFQS------ 131
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
S +LNAL+ CI+S N+ E R+F FP +G++PN+ET+N +IKSF ESG S Y
Sbjct: 132 SPSTRSLNALIFACIVSGNHTEAARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSFY 191
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
S+ EM +K ++PNAT F LAGFYKE +++DVGKVL++M+K G + VYN+R+QSL
Sbjct: 192 SVFDEMCKKGLKPNATTFTTALAGFYKEERFDDVGKVLELMKKNGCGESLPVYNVRVQSL 251
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CKL RS EA+AL+D M+ +G KP+ TY HLI+GF KEG+LE AK+L+ M G D
Sbjct: 252 CKLGRSGEARALVDEMVKKGTKPSWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDI 311
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+FM ++LC+G +++TAL V AK WVP FSTMK LV GLA S++ EA +I
Sbjct: 312 NFYFMLIHYLCKGDDFDTALGVYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEK 371
Query: 383 MKKRFPKSGDMW---NAALP 399
MK++FP + W ALP
Sbjct: 372 MKEKFPDKTEGWKEVEEALP 391
>gi|224078640|ref|XP_002305587.1| predicted protein [Populus trichocarpa]
gi|222848551|gb|EEE86098.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/413 (44%), Positives = 258/413 (62%), Gaps = 67/413 (16%)
Query: 1 MALLYRLRTN--FNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRI 58
MAL RLR L+ +++ +L S+ + L+ K R ++RLK+E+NP +I
Sbjct: 1 MALFARLRLQSILPLRRLHHHHLNFST--------SPLSSISKTRVALSRLKTETNPEKI 52
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT-RPDLRQNERFHVHS 117
L+IC ASL PE+ +DR+ FS+A+ KL+++N+F+ I +LL EL+T RPDLR E+F HS
Sbjct: 53 LEICRSASLTPEANIDRITFSVAIDKLAKSNNFSYIDELLTELRTSRPDLR-TEQFAAHS 111
Query: 118 IVLYGQANMIDHAMQTFEEM---DKYGL---RQSVDALNALLLGCILSKNYEEVKRIFTE 171
IVL+G+A MIDHA++ F+E ++ G+ SV LN+LL CIL+K Y EVKR+F +
Sbjct: 112 IVLFGKAGMIDHAIRLFKEYHEKNQNGVVLSSGSVKLLNSLLYSCILAKKYNEVKRVFVD 171
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
F K + IEPN +TYN +I++F E G SSS YSIL EM +K ++PN T G L+ GFYKE
Sbjct: 172 FTKSFKIEPNLDTYNTIIQAFSEGGSSSSCYSILNEMDKKGVKPNTTTIGNLITGFYKEE 231
Query: 232 KYEDVGKVLQMMEK-CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
KYEDVGKVL+MME+ G +G+++YNIRI+SLCKLKRS+EA+ALL G ++RG+KP TY
Sbjct: 232 KYEDVGKVLKMMEEDYGTKAGIDIYNIRIRSLCKLKRSKEAEALLGGCIARGVKPKAVTY 291
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+ + E A ++ C+ SM
Sbjct: 292 R----------DFESAYRI-----------------------------------CKESME 306
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN---AALPR 400
K VP+ STMK LV GLAS V +A ELIG +K++F K+ ++WN A LP+
Sbjct: 307 KKLVPNSSTMKMLVEGLASSGNVEKAKELIGEIKEKFSKNVELWNEVEAGLPQ 359
>gi|226490900|ref|NP_001141371.1| uncharacterized protein LOC100273462 [Zea mays]
gi|194704218|gb|ACF86193.1| unknown [Zea mays]
gi|414880165|tpg|DAA57296.1| TPA: hypothetical protein ZEAMMB73_527047 [Zea mays]
Length = 393
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/373 (44%), Positives = 231/373 (61%), Gaps = 17/373 (4%)
Query: 24 SSLLSAGDEAAALTIKEKKRATIARLKSESNPF--RILDICCGASLAPESPLDRMAFSIA 81
+S+L+ + LT + K R I+ LKS P +IL IC A+L PE+ +DR+A S+A
Sbjct: 27 ASILNPSSPSTPLTSRHKTRLAISLLKSSPPPPPDQILSICRAAALTPETHIDRIALSLA 86
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
SKLS A + L+ R H+I L+GQA+++ A+ TF+
Sbjct: 87 ASKLSSAP---------DTLRDLASTVLTPRHAPHAIALFGQAHLLPDAISTFQS----- 132
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
S +LNAL+ CI+S N+ E R+F FP +G++PN+ET+N +IKSF ESG S
Sbjct: 133 -SPSTRSLNALIFACIVSGNHTEAARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSF 191
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
YS+ EM +K ++PN+ F LAGFYKE K++D+ KVL++M+K G + VYN+R+QS
Sbjct: 192 YSVFDEMCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQS 251
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCKL RS EA+AL+D M+ +G KPN TY HLI+GF KEG+LE AK+L+ M G D
Sbjct: 252 LCKLGRSGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGD 311
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
S +FM Y+LC+G + +TAL + AK WVP FSTMK LV GLA S++ EA +I
Sbjct: 312 SDFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIE 371
Query: 382 LMKKRFPKSGDMW 394
MK++FP + W
Sbjct: 372 KMKEKFPDKTEGW 384
>gi|195620494|gb|ACG32077.1| membrane-associated salt-inducible protein [Zea mays]
Length = 393
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/373 (44%), Positives = 231/373 (61%), Gaps = 17/373 (4%)
Query: 24 SSLLSAGDEAAALTIKEKKRATIARLKSESNPF--RILDICCGASLAPESPLDRMAFSIA 81
+S+L+ + LT + K R I+ LKS P +IL IC A+L PE+ +DR+A S+A
Sbjct: 27 ASILNPSSPSTPLTSRHKTRLAISLLKSSPPPPPDQILSICRAAALTPETHIDRIALSLA 86
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
SKLS A + L+ R H+I L+GQA+++ A+ TF+
Sbjct: 87 ASKLSSAP---------DTLRDLASTVLTPRHAPHAIALFGQAHLLPDAISTFQS----- 132
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
S +LNAL+ CI+S N+ E R+F FP +G++PN+ET+N +IKSF ESG S
Sbjct: 133 -SPSTRSLNALIFACIVSGNHTEXARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSF 191
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
YS+ EM +K ++PN+ F LAGFYKE K++D+ KVL++M+K G + VYN+R+QS
Sbjct: 192 YSVFDEMCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQS 251
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCKL RS EA+AL+D M+ +G KPN TY HLI+GF KEG+LE AK+L+ M G D
Sbjct: 252 LCKLGRSGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGD 311
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
S +FM Y+LC+G + +TAL + AK WVP FSTMK LV GLA S++ EA +I
Sbjct: 312 SDFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIE 371
Query: 382 LMKKRFPKSGDMW 394
MK++FP + W
Sbjct: 372 KMKEKFPDKTEGW 384
>gi|359494844|ref|XP_003634853.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Vitis vinifera]
Length = 336
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 172/324 (53%), Positives = 226/324 (69%), Gaps = 19/324 (5%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILD 60
MA L RLR ++ +R SS+LS D A L+ KEK RA ++ LKSE +P RIL+
Sbjct: 1 MAFLSRLRPIYS-----HRCRFFSSILSP-DSATPLSSKEKSRAALSLLKSEQDPQRILE 54
Query: 61 ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL 120
IC A+L PES LDR+AFS+A+SKL+ + HF++I L+ELK RPDLR ERF H+IVL
Sbjct: 55 ICRAAALTPESHLDRVAFSVAISKLADSKHFDSIRHFLDELKARPDLR-TERFVSHAIVL 113
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+GQA M++ A++TFE+M + G+ ++V +LNALL CIL+KNY+E RIF EFPK YGIE
Sbjct: 114 FGQAGMLNDAVRTFEQMHQLGVDRTVRSLNALLFSCILAKNYKEANRIFLEFPKTYGIEL 173
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N ++YN V+K+F ESG SSS YSILAEM RK ++PNAT FG+LLAGFY E KYEDVG VL
Sbjct: 174 NLDSYNTVLKAFSESGSSSSGYSILAEMGRKGVKPNATSFGILLAGFYNEEKYEDVGXVL 233
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-----------GIKPNLDT 289
+MME+ + G++ YNIR QSLCKLK S E +ALLDG+L+R G PN+ T
Sbjct: 234 KMMEEYXMQPGISTYNIRXQSLCKLKXSSE-RALLDGILARRMXXXXXXYEKGWXPNIST 292
Query: 290 YKHLIHGFGKEGNLEGAKKLFASM 313
L++G +E A++L +
Sbjct: 293 MTSLVNGLXSISKVEEARELIGQI 316
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
NA F +LA YKE L+ + GI ++ YN +++ + S ++L
Sbjct: 143 NALLFSCILAKNYKEANR----IFLEFPKTYGIELNLDSYNTVLKAFSESGSSSSGYSIL 198
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ- 334
M +G+KPN ++ L+ GF E E + M +P + + LC+
Sbjct: 199 AEMGRKGVKPNATSFGILLAGFYNEEKYEDVGXVLKMMEEYXMQPGISTYNIRXQSLCKL 258
Query: 335 ---------GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G + KGW P+ STM SLV GL SISKV EA ELIG +K+
Sbjct: 259 KXSSERALLDGILARRMXXXXXXYEKGWXPNISTMTSLVNGLXSISKVEEARELIGQIKE 318
Query: 386 RFPKSGDMWN---AALPR 400
+F ++ D WN A LP+
Sbjct: 319 KFSRNVDKWNEIEAGLPQ 336
>gi|357125390|ref|XP_003564377.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Brachypodium
distachyon]
Length = 390
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/405 (42%), Positives = 241/405 (59%), Gaps = 20/405 (4%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPF--RI 58
MA RL L T +S+L+ +ALT ++K R I+ LKS P +I
Sbjct: 1 MAAAVRLILRRRLSTATATPPTPASILNPSSPTSALTSRQKTRLAISLLKSSPPPPPDQI 60
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSI 118
L IC A+L+P + LDR+A S+A S+LS A +++ L L H+I
Sbjct: 61 LSICRAAALSPNTHLDRVALSLATSRLSSAP--DSLRDLTSSLLI-------PHHAPHAI 111
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
L+GQA ++ A+ TF+ S +LNALL C+++ N+ E RIF FP + +
Sbjct: 112 ALFGQAGLLPDAISTFQS------SPSTRSLNALLFACLVAGNHAEAARIFQTFPDAHNV 165
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN+ET+N +IKSF ESG + S YS+ EM +K ++PNAT F +AGFYKE ++ DV K
Sbjct: 166 KPNTETFNAIIKSFSESGTTRSFYSVFDEMCKKGVKPNATTFTTAIAGFYKEEQFGDVEK 225
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V+++M+K G + VYN R+Q LCKL RS EAKALL+ M+ RG KP+ TY HLI+GF
Sbjct: 226 VIELMKKHGCGESLQVYNARVQGLCKLGRSGEAKALLNEMVKRGTKPSWVTYNHLIYGFC 285
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KEG+LE K+L+ M G DS +F ++LC+ G++++AL V + A+ WVP FS
Sbjct: 286 KEGDLEEVKRLYKEMGKKGLVGDSSFYFTLIFYLCKAGDFDSALGVYNETTARSWVPCFS 345
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMW---NAALPR 400
TMK LV GLA SKV EA +I MK++FP + W ALP+
Sbjct: 346 TMKMLVNGLAGSSKVDEAKGIIEKMKEKFPDKAEGWKEVEEALPQ 390
>gi|125572292|gb|EAZ13807.1| hypothetical protein OsJ_03733 [Oryza sativa Japonica Group]
Length = 351
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 223/405 (55%), Gaps = 59/405 (14%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKS--ESNPFRI 58
MA R L T S+L+ + LT ++K R I+ LKS P +I
Sbjct: 1 MAAAVRRLLRRGLSTATAPPPTPGSILNPSSPSTPLTSRQKSRLAISLLKSTPPPPPDQI 60
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSI 118
L IC A+L+P+S LDR
Sbjct: 61 LSICRAAALSPDSHLDR------------------------------------------- 77
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
A ++ A+ TF+ S +LNALL C++S N+ E R+F FP Y +
Sbjct: 78 -----AGLLPDAVSTFKS------SPSTRSLNALLFACLVSGNHAEAARVFQTFPDAYSV 126
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN++T+N +IKSF ESG + S YS+L EM +K ++PNAT F +AGFYKE +++DVGK
Sbjct: 127 KPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVGK 186
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V+++M+K G + V+N+R+Q LCKL RS +AKALL+ M+ +G KP+ TY HLIHGF
Sbjct: 187 VIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFC 246
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KEG+LE AK+L+ M G DS ++M Y+LC+GG+++TA+ V A+ WVP FS
Sbjct: 247 KEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFS 306
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNA---ALPR 400
TMK LV GLA S+V EA +I MK++FP + W ALP+
Sbjct: 307 TMKMLVNGLAGSSRVDEAKGIIEKMKEKFPDKAEGWKEVEDALPQ 351
>gi|326528779|dbj|BAJ97411.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534194|dbj|BAJ89447.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 390
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 160/381 (41%), Positives = 230/381 (60%), Gaps = 20/381 (5%)
Query: 25 SLLSAGDEAAALTIKEKKRATIARLKSESNPF--RILDICCGASLAPESPLDRMAFSIAV 82
S+L+ LT ++K R I+ LKS P +IL IC A+L+P++ LDR+A S+A
Sbjct: 25 SILNPSSPTTPLTTRQKTRLAISLLKSSPPPPPDQILSICRAAALSPKTHLDRVALSLAT 84
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGL 142
S+LS A +++ L L PD H+IVL+GQA ++ A+ TF+
Sbjct: 85 SRLSTAP--DSLRDLTSSLLI-PDHAH------HAIVLFGQAGLLPDAISTFQS------ 129
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
S +LNALL CI++ N+ E RIF FP + ++PN+ET+N +IKSF ESG + S Y
Sbjct: 130 SPSTRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTRSFY 189
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
S+ EM ++ ++P AT F +AGFYKE +++DV KV+++M+K G + VYN R+Q L
Sbjct: 190 SVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHGCGESLQVYNARVQGL 249
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CKL R+ +AKALL M +G KP+ TY HLI+GF KEG+LE K+L+ M G DS
Sbjct: 250 CKLGRNGDAKALLSEMAKKGTKPSWVTYNHLIYGFCKEGDLEEVKRLYKEMGMKGLVGDS 309
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+F + LC+ G+++TAL V + W+P FSTMK LV GLA S++ EA +I
Sbjct: 310 NFYFTVIFHLCKAGDFDTALSVYNEIAPRNWIPCFSTMKMLVNGLAGSSRIDEAKGIIEK 369
Query: 383 MKKRFPKSGDMWN---AALPR 400
MK++FP W ALP+
Sbjct: 370 MKEKFPDRDAGWKEVEEALPQ 390
>gi|210077731|gb|ACJ07054.1| putative membrane-associated salt-inducible protein [Aegilops
speltoides]
Length = 289
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 190/303 (62%), Gaps = 15/303 (4%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
+IL IC A+L+P++ LDR+A S+A S+LS A L +L + + + H
Sbjct: 2 QILSICRAAALSPKTHLDRVALSLATSRLSTA------PDSLRDLTSSLLIPHHAH---H 52
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
+IVL+GQA ++ A+ TF+ S +LNALL CI++ N+ E RIF FP +
Sbjct: 53 AIVLFGQAGLLPDAISTFQS------SPSTRSLNALLFACIVAGNHAEAARIFQTFPDAH 106
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
++PN+ET+N +IKSF ESG + S YS+ EM ++ ++P AT F +AGFYKE +++DV
Sbjct: 107 RVKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDV 166
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV+++M+K G + VYN R+Q LCKL R+ +AKALL M +G KPN TY HLI+G
Sbjct: 167 EKVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYG 226
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F KEG+LE AK+L+ M G DS +F + LC+ G+++TAL V + + WVP
Sbjct: 227 FCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPC 286
Query: 357 FST 359
FST
Sbjct: 287 FST 289
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 6/172 (3%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSEEAKAL 274
NA F ++AG + E ++ Q + +N I+S + + ++
Sbjct: 80 NALLFACIVAGNHAE-----AARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTRSFYSV 134
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
D M +G+KP T+ I GF KE + +K+ M GC + LC+
Sbjct: 135 FDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHGCGESLQVYNARVQGLCK 194
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G A + KG P++ T L+ G + EA L M K+
Sbjct: 195 LGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGKK 246
>gi|210077729|gb|ACJ07053.1| putative membrane-associated salt-inducible protein [Secale
cereale]
Length = 289
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/303 (43%), Positives = 190/303 (62%), Gaps = 15/303 (4%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
+IL IC A+L+P++ LDR+A S+A S+LS A L +L + + + H
Sbjct: 2 QILSICRAAALSPKTHLDRVALSLATSRLSTA------PASLRDLTSSLLIPHHAH---H 52
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
+IVL+GQA ++ A+ TF+ S +LNALL CI++ N+ E RIF FP +
Sbjct: 53 AIVLFGQAGLLPDAISTFQS------SPSTRSLNALLFACIVAGNHAEAARIFQTFPDAH 106
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
++PN+ET+N +IKSF ESG + S YS+ EM ++ ++P AT F +AGFYKE +++DV
Sbjct: 107 RVKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKEGVKPTATTFTAAIAGFYKEERFDDV 166
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV+++M+K G + VYN R+Q LCKL R+ +AKALL M +G KPN TY HLI+G
Sbjct: 167 EKVIKLMKKHGCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYG 226
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F KEG+LE AK+L+ M G DS +F + LC+ G+++TAL V + + WVP
Sbjct: 227 FCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPC 286
Query: 357 FST 359
FST
Sbjct: 287 FST 289
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 6/172 (3%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSEEAKAL 274
NA F ++AG + E ++ Q + +N I+S + + ++
Sbjct: 80 NALLFACIVAGNHAE-----AARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTRSFYSV 134
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
D M G+KP T+ I GF KE + +K+ M GC + LC+
Sbjct: 135 FDEMCKEGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHGCGESLQVYNARVQGLCK 194
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G A + KG P++ T L+ G + EA L M K+
Sbjct: 195 LGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGKK 246
>gi|115440435|ref|NP_001044497.1| Os01g0793200 [Oryza sativa Japonica Group]
gi|113534028|dbj|BAF06411.1| Os01g0793200, partial [Oryza sativa Japonica Group]
Length = 235
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 162/235 (68%), Gaps = 3/235 (1%)
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
F FP Y ++PN++T+N +IKSF ESG + S YS+L EM +K ++PNAT F +AGFY
Sbjct: 1 FQTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFY 60
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
KE +++DVGKV+++M+K G + V+N+R+Q LCKL RS +AKALL+ M+ +G KP+
Sbjct: 61 KEERFDDVGKVIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWL 120
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY HLIHGF KEG+LE AK+L+ M G DS ++M Y+LC+GG+++TA+ V
Sbjct: 121 TYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEI 180
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNA---ALPR 400
A+ WVP FSTMK LV GLA S+V EA +I MK++FP + W ALP+
Sbjct: 181 AARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEKMKEKFPDKAEGWKEVEDALPQ 235
>gi|210077735|gb|ACJ07056.1| putative membrane-associated salt-inducible protein [Triticum
urartu]
Length = 289
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 189/303 (62%), Gaps = 15/303 (4%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
+IL IC A+L+P++ LDR+A S+A S+LS A L +L + + + H
Sbjct: 2 QILSICRAAALSPKTHLDRVALSLATSRLSTA------PDSLRDLTSSLLIPHHAH---H 52
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
+IVL+GQA ++ A+ TF+ S +LNALL CI++ N+ E RIF FP +
Sbjct: 53 AIVLFGQAGLLPDAISTFQS------SPSTRSLNALLFACIVAGNHTEAARIFQTFPDAH 106
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
++PN+ET+N +IKSF ESG + S YS+ EM ++ ++P AT F +AGFYKE +++DV
Sbjct: 107 RVKPNAETFNSIIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDV 166
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV+++M+K + VYN R+Q LCKL R+ +AKALL M +G KPN TY HLI+G
Sbjct: 167 EKVIKLMKKHSCGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYG 226
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F KEG+LE AK+L+ M G DS +F + LC+ G+++TAL V + + WVP
Sbjct: 227 FCKEGDLEEAKRLYKEMGKKGLVGDSGFYFTVIFHLCKAGDFDTALGVYNEIIPRNWVPC 286
Query: 357 FST 359
FST
Sbjct: 287 FST 289
>gi|210077733|gb|ACJ07055.1| putative membrane-associated salt-inducible protein [Triticum
monococcum]
Length = 277
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 125/292 (42%), Positives = 182/292 (62%), Gaps = 15/292 (5%)
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMI 127
+P++ LDR+A S+A S+LS A L +L + + + H+IVL+GQA ++
Sbjct: 1 SPKTHLDRVALSLATSRLSTA------PDSLRDLTSSLLIPHHAH---HAIVLFGQAGLL 51
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A+ TF+ S +LNALL CI++ N+ E RIF FP + ++PN+ET+N
Sbjct: 52 PDAITTFQS------SPSTRSLNALLFACIVAGNHAEAARIFQTFPDAHRVKPNAETFNS 105
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+IKSF ESG + S YS+ EM ++ ++P AT F +AGFYKE +++DV KV+++M+K G
Sbjct: 106 IIKSFSESGTTRSFYSVFDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHG 165
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ VYN R+Q LCKL R+ +AKALL M +G KPN TY HLI+GF KEG+LE AK
Sbjct: 166 CGESLQVYNARVQGLCKLGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKEGDLEEAK 225
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+L+ M G DS +F + LC+ G+++TAL V + + WVP FST
Sbjct: 226 RLYKEMGKKGLVGDSGFYFTVIFHLCKSGDFDTALGVYNEIIPRNWVPCFST 277
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 66/172 (38%), Gaps = 6/172 (3%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSEEAKAL 274
NA F ++AG + E ++ Q + +N I+S + + ++
Sbjct: 68 NALLFACIVAGNHAE-----AARIFQTFPDAHRVKPNAETFNSIIKSFSESGTTRSFYSV 122
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
D M +G+KP T+ I GF KE + +K+ M GC + LC+
Sbjct: 123 FDEMCKQGVKPTATTFTAAIAGFYKEERFDDVEKVIKLMKKHGCGESLQVYNARVQGLCK 182
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G A + KG P++ T L+ G + EA L M K+
Sbjct: 183 LGRNGDAKALLSEMAKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGKK 234
>gi|147840633|emb|CAN68320.1| hypothetical protein VITISV_032192 [Vitis vinifera]
Length = 416
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 184/341 (53%), Gaps = 4/341 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPL-DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
L+SE +P R L+I S SPL R A + V +L+++ F I L+E K P +
Sbjct: 46 LRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKI 105
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
Q E + I YG A M HA++TF +M++ G +S + NALL C SK +++V +
Sbjct: 106 TQ-EPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPK 164
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F E P+ YGI P+ +Y ++KS+CESG S S+L EM K + A F +L
Sbjct: 165 FFEEIPRRYGIXPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDAL 224
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
YK+ + + KV M K G V YN++I E KAL+D M + G+KP+
Sbjct: 225 YKQGQSDRAEKVWHEMAKKGCLD-VGAYNVKIM-FAHGGDPENVKALIDEMSNAGLKPDT 282
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
+Y +L+ + K G ++ AKK++A + GC P++ F Y+LC+ G++ET KV +
Sbjct: 283 ISYNYLMTSYCKSGMMDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQ 342
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
S + +P F T++ LV GL K EA LI +KK FP
Sbjct: 343 SAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFP 383
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+++ ++ +EM GL+ + N L+ S +E K+++ E + G
Sbjct: 255 IMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEAKKVYAELEET-GC 313
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL---LLAGFYKEHKYED 235
PN+ T+ +I C SGD + Y + ++ + R DFG L+ G ++ K ++
Sbjct: 314 HPNAATFRTLIYYLCRSGDFETGYKVF---KQSAFRRKIPDFGTLRHLVEGLVQKKKTKE 370
Query: 236 VGKVLQMMEKCGIASGVNVY 255
+++ ++K A+ +NV+
Sbjct: 371 AKGLIRTVKKNFPANFLNVW 390
>gi|225430810|ref|XP_002271426.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Vitis vinifera]
Length = 414
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 184/341 (53%), Gaps = 4/341 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPL-DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
L+SE +P R L+I S SPL R A + V +L+++ F I L+E K P +
Sbjct: 44 LRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKI 103
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
Q E + I YG A M HA++TF +M++ G +S + NALL C SK +++V +
Sbjct: 104 TQ-EPYLSTLIRSYGIAGMFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPK 162
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F E P+ YG+ P+ +Y ++KS+CESG S S+L EM K + A F +L
Sbjct: 163 FFEEIPRRYGVLPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDAL 222
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
YK+ + + KV M K G V YN++I E KAL+D M + G+KP+
Sbjct: 223 YKQGQSDRAEKVWHEMAKKGCLD-VGAYNVKIM-FAHGGDPENVKALIDEMSNAGLKPDT 280
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
+Y +L+ + K G ++ AKK++A + GC P++ F Y+LC+ G++ET KV +
Sbjct: 281 ISYNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQ 340
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
S + +P F T++ LV GL K EA LI +KK FP
Sbjct: 341 SAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFP 381
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+++ ++ +EM GL+ + N L+ S +E K+++ E + G
Sbjct: 253 IMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYAELEET-GC 311
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL---LLAGFYKEHKYED 235
PN+ T+ +I C SGD + Y + ++ + R DFG L+ G ++ K ++
Sbjct: 312 HPNAATFRTLIYYLCRSGDFETGYKVF---KQSAFRRKIPDFGTLRHLVEGLVQKKKTKE 368
Query: 236 VGKVLQMMEKCGIASGVNVY 255
+++ ++K A+ +NV+
Sbjct: 369 AKGLIRTVKKNFPANFLNVW 388
>gi|293334061|ref|NP_001169447.1| uncharacterized protein LOC100383318 [Zea mays]
gi|224029437|gb|ACN33794.1| unknown [Zea mays]
gi|414869277|tpg|DAA47834.1| TPA: hypothetical protein ZEAMMB73_389575 [Zea mays]
Length = 459
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 189/354 (53%), Gaps = 1/354 (0%)
Query: 39 KEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLL 98
+E+++ + R+K E +P R+ + + +R AF AV++L+ A + + ++L
Sbjct: 90 EEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRNDLVEEIL 149
Query: 99 EELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL 158
E+ K P R+ E F V I LYG+A M HA++TF+EM YG ++ +LNA + +
Sbjct: 150 EQHKALPQGRR-EGFVVRIIGLYGKAGMPGHALRTFQEMGMYGCPRTAKSLNATMKVLLR 208
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
++ ++E +F E P+ Y +E + + N V+K FC+ GD + Y ++ M R +RP+
Sbjct: 209 ARMFDEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYQVMQGMERAGVRPDVI 268
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ L+A FYK + E + +M G + YN+RIQ L R +A L M
Sbjct: 269 TYTTLMAAFYKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANELARKM 328
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
GIKP+ TY +I GF G E AK +F +M GC+P+S + ++LC+ ++
Sbjct: 329 YVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDF 388
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGD 392
+ A ++C+ SM K W P T+ L+ GL +ISK E++ L+ R P D
Sbjct: 389 DLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSYSD 442
>gi|357148282|ref|XP_003574702.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 448
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 205/381 (53%), Gaps = 5/381 (1%)
Query: 13 LKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESP 72
+++ N R A + +A ++ + + + + R+K E +P R+ ++ +
Sbjct: 56 VRSKNQRRRAPNDAPAAAEDKGS---TDSETPLLVRIKHERDPKRLYELFRANAHNRLLV 112
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+R AF AV++LS A + + ++LE+ K P R+ E F V I LYG+A M +HA++
Sbjct: 113 ENRFAFQDAVARLSGARRNDLVEEILEQHKALPQGRR-EGFVVRIIGLYGKARMPEHALR 171
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
TF+EM+ YG + + NA L + ++ ++E ++F E P YG+E + +YN V+K
Sbjct: 172 TFQEMEMYGCTCTNKSFNATLKVLMQAQLFDEALQLFEEGPGKYGVELDDISYNTVVKMM 231
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G+ + Y ++ EM ++ I+P+ + L+A FYK + E + +M G +
Sbjct: 232 CDMGELRAAYRVMQEMEKEGIQPDVITYTTLMAAFYKNGQREVGDGLWNLMRLRGCMPTL 291
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN+RIQ L +R +A L+ M + GI+P+ TY +I GF E AK +F +
Sbjct: 292 ASYNVRIQFLINRRRGWQANDLVRKMYAAGIRPDEITYNLVIKGFFMMREHEMAKTVFGA 351
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M GC+P+ + ++LC+ E++ A ++C+ SM W P T+ L+ GL SISK
Sbjct: 352 MHGRGCKPNGKIYQTMVHYLCERREFDLAFRLCKDSMENNWFPSVDTIHHLLKGLMSISK 411
Query: 373 VAEANELIGL-MKKRFPKSGD 392
A E++ L M ++ SGD
Sbjct: 412 DRNAGEIMKLVMGRKSSYSGD 432
>gi|125603901|gb|EAZ43226.1| hypothetical protein OsJ_27826 [Oryza sativa Japonica Group]
Length = 515
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 200/370 (54%), Gaps = 9/370 (2%)
Query: 19 RNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAF 78
R +++ SAG E A + + R+K+E +P R+ ++ + +R AF
Sbjct: 134 RRHPSTTKESAGVEPAEPPV-------LVRIKNERDPVRLYELFRANAHNRLLIENRFAF 186
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
AV++L+ A + + ++LE+ K P R+ E F V I LYG+A M DHA+ TF EM
Sbjct: 187 EDAVARLAGARRNDLVEEILEQHKALPQGRR-EGFVVRIIGLYGKARMPDHALSTFREMG 245
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
YG ++ +LNA + + ++ ++EV ++F E + YG+E + +YN V+K C+ G+
Sbjct: 246 LYGCPRTAKSLNATMKVLLRARLFDEVLQLF-ESSETYGVELDDISYNTVVKMMCDLGEL 304
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ + ++ EM + +RP+ + L+ FYK + E + +M G + YN+R
Sbjct: 305 RAAFRVMQEMEKAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVR 364
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
IQ L +R +A L+ M + G++P+ TY +I GF G E AK +F +M GC
Sbjct: 365 IQFLVNRRRGWQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGC 424
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
+P++ + ++LC+ E++ A ++C+ SM K W P T+ L+ GL SISK A E
Sbjct: 425 KPNAKVYQTMVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNARE 484
Query: 379 LIGLMKKRFP 388
++ L+ R P
Sbjct: 485 IMKLVIGRKP 494
>gi|338762831|gb|AEI98618.1| hypothetical protein 111O18.5 [Coffea canephora]
Length = 417
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 188/359 (52%), Gaps = 9/359 (2%)
Query: 37 TIKEKKRATIARLKSES------NPFRILDICCGASLAPESPLD-RMAFSIAVSKLSQAN 89
T K +TI+ +++S +P + L+I S SPL R V +L++++
Sbjct: 32 TATSTKPSTISTSRAKSQLRYVYDPDKALEIYSSVSPNYTSPLSSRYTQEYTVRRLAKSH 91
Query: 90 HFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDAL 149
F+ I LE K P + Q E F I YG A M DHA++TF EMD G +S +
Sbjct: 92 RFSDIESFLESHKNDPKITQ-EPFLSSLIRSYGLAGMFDHALKTFNEMDDLGTPRSTVSF 150
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NALL C SKN+ +F E P+ YG+ P+ +Y +IK++CE G S L EM
Sbjct: 151 NALLSACNSSKNFGRAPELFDEVPQRYGLSPDKFSYGNLIKAYCEMGSPESALERLKEME 210
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K I A F ++ FYK+ K E+ +V M K G V YN+RI + + +
Sbjct: 211 EKGIEITAVTFTTIMHSFYKKGKNEEAERVWSEMVKRGCPIDVGAYNVRIMHIHG-EDPD 269
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
K L++ + S G+KP+ +Y +L+ + K G ++ A K++ + GC+P++ F
Sbjct: 270 SVKGLIEEISSAGLKPDTISYNYLMTSYCKSGMMDEAFKVYEDLEGNGCKPNAATFRTLI 329
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
++LC+ +ET KV + S+A +P F+T+K L+ GL SK EA +I +KK+FP
Sbjct: 330 FYLCKRQRFETGYKVFKESVAVHKIPDFNTLKHLLEGLVKRSKFKEAKGMIRTVKKKFP 388
>gi|115477108|ref|NP_001062150.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|42407346|dbj|BAD08807.1| putative drought-inducible protein 1OS [Oryza sativa Japonica
Group]
gi|113624119|dbj|BAF24064.1| Os08g0499800 [Oryza sativa Japonica Group]
gi|125562056|gb|EAZ07504.1| hypothetical protein OsI_29761 [Oryza sativa Indica Group]
gi|215716978|dbj|BAG95341.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 443
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 200/370 (54%), Gaps = 9/370 (2%)
Query: 19 RNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAF 78
R +++ SAG E A + + R+K+E +P R+ ++ + +R AF
Sbjct: 62 RRHPSTTKESAGVEPAEPPV-------LVRIKNERDPVRLYELFRANAHNRLLIENRFAF 114
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
AV++L+ A + + ++LE+ K P R+ E F V I LYG+A M DHA+ TF EM
Sbjct: 115 EDAVARLAGARRNDLVEEILEQHKALPQGRR-EGFVVRIIGLYGKARMPDHALSTFREMG 173
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
YG ++ +LNA + + ++ ++EV ++F E + YG+E + +YN V+K C+ G+
Sbjct: 174 LYGCPRTAKSLNATMKVLLRARLFDEVLQLF-ESSETYGVELDDISYNTVVKMMCDLGEL 232
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ + ++ EM + +RP+ + L+ FYK + E + +M G + YN+R
Sbjct: 233 RAAFRVMQEMEKAGVRPDVITYTTLMDAFYKCGQREVGDGLWNLMRLRGCMPTLASYNVR 292
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
IQ L +R +A L+ M + G++P+ TY +I GF G E AK +F +M GC
Sbjct: 293 IQFLVNRRRGWQANDLVRKMYASGLRPDEITYNLVIKGFFMMGEHEMAKTVFGAMHGRGC 352
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
+P++ + ++LC+ E++ A ++C+ SM K W P T+ L+ GL SISK A E
Sbjct: 353 KPNAKVYQTMVHYLCERREFDLAFRLCKDSMEKNWFPSVDTINQLLKGLISISKDRNARE 412
Query: 379 LIGLMKKRFP 388
++ L+ R P
Sbjct: 413 IMKLVIGRKP 422
>gi|242082341|ref|XP_002445939.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
gi|241942289|gb|EES15434.1| hypothetical protein SORBIDRAFT_07g028400 [Sorghum bicolor]
Length = 465
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 188/348 (54%), Gaps = 1/348 (0%)
Query: 45 TIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR 104
+ ++K E +P R+ + + +R AF AV++L+ A + + ++LE+ K
Sbjct: 102 VLVKIKHERDPERLYQLFRTNAHNRLLVENRFAFEDAVARLAGARRNDLVEEILEQHKAL 161
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
P R+ E F V I LYG+A M HA++TF+EM YG ++ +LNA + + ++ ++E
Sbjct: 162 PQGRR-EGFVVRIIGLYGKAGMPSHALRTFQEMGMYGCPRTAKSLNATMKVLLRAQMFDE 220
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
+F E P+ YG+E + + N V+K +C+ GD + Y ++ M ++P+ + L+
Sbjct: 221 ALWLFEEGPEKYGVELDDISCNTVVKIYCDMGDLRAAYRVMQGMEGAGVQPDVVTYTTLM 280
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
A FYK + E + +M G + YN+RIQ L +R +A L+ M + GIK
Sbjct: 281 AAFYKCGQREVGDGLWNLMRLRGCEPTLATYNVRIQFLINRERGWQANELVRKMYAVGIK 340
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ TY +I GF G E AK +F +M GC+P+S + ++LC+ +++ A +
Sbjct: 341 PDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYLCERRDFDLAFRF 400
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGD 392
C+ SM K W P +T+ L+ GL +ISK A E++ L+ R P D
Sbjct: 401 CKDSMEKNWFPSVNTINQLLKGLMAISKDRNAREIMKLVTGRKPPYSD 448
>gi|156070795|gb|ABU45207.1| unknown [Solanum bulbocastanum]
Length = 405
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 182/343 (53%), Gaps = 3/343 (0%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLD-RMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
++LK+E +P + L+I S SPL R A V +L++++ F+ I LE K P
Sbjct: 38 SKLKAEHDPDKALEIYSSVSDRYVSPLSSRYAQEFTVKRLAKSHRFSDIENFLESHKNSP 97
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
+ Q E F I YG A M DHA++ + +MD G +S + N LL C+ SK Y+ V
Sbjct: 98 KITQ-EPFLSSIIRSYGVAGMFDHALKIYHQMDDLGTPRSAISFNVLLSACVRSKLYDRV 156
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
++F E P YG P+ +Y +I+S+CE G L EM K + + F +L
Sbjct: 157 PQLFDEIPVKYGFLPDKVSYGILIRSYCEMGSPEMAMERLKEMEEKGVEITSVTFTTILH 216
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
FYK+ K ++ KV M G V YN++I ++ + E KAL++ M G+KP
Sbjct: 217 SFYKKRKSDEAEKVWNEMVNRGCGPDVGAYNVKIMNI-QGGDPEGVKALIEEMNDAGLKP 275
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ +Y +L+ + + ++ A+K++ + GC P++ F ++LC+ G +ET KV
Sbjct: 276 DTISYNYLMTCYCRNELIDEAQKVYDDLEKNGCNPNAATFRTLIFYLCKKGRFETGYKVF 335
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ S+ +P F T+K LV GLA SK+ +A + +KK+FP
Sbjct: 336 KESVKVQKIPDFDTLKYLVEGLAKKSKLKDAKGMCRTVKKKFP 378
>gi|15234493|ref|NP_195386.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181418|sp|Q9M065.1|PP352_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g36680, mitochondrial; Flags: Precursor
gi|2464912|emb|CAB16807.1| salt-inducible like protein [Arabidopsis thaliana]
gi|7270616|emb|CAB80334.1| salt-inducible like protein [Arabidopsis thaliana]
gi|17381286|gb|AAL36061.1| C7A10_680/C7A10_680 [Arabidopsis thaliana]
gi|24111267|gb|AAN46757.1| At4g36680/C7A10_680 [Arabidopsis thaliana]
gi|332661286|gb|AEE86686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 412
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 185/344 (53%), Gaps = 4/344 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLD-RMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
L+ E +P + L I S SP+ R A + V +L++ F+ I L+E K P +
Sbjct: 40 LRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKI 99
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
++ E F+ I YGQA+M +HAM+TFE+MD+YG +S + NALL C+ SKN+++V +
Sbjct: 100 KE-EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQ 158
Query: 168 IFTEFPKVYG-IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+F E P+ Y I P+ +Y +IKS+C+SG I+ +M+ K + F +L+
Sbjct: 159 LFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
YK+ + E + M K G YN+RI S K + E K L++ M S G+KP+
Sbjct: 219 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPD 277
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+Y +L+ + + G L+ AKK++ + C P++ F + LC YE + +
Sbjct: 278 TISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFK 337
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
S+ +P F+T+K LV GL K +A LI +KK+FP S
Sbjct: 338 KSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPS 381
>gi|2632061|emb|CAA05629.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
Length = 428
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 185/344 (53%), Gaps = 4/344 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLD-RMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
L+ E +P + L I S SP+ R A + V +L++ F+ I L+E K P +
Sbjct: 56 LRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKI 115
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
++ E F+ I YGQA+M +HAM+TFE+MD+YG +S + NALL C+ SKN+++V +
Sbjct: 116 KE-EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQ 174
Query: 168 IFTEFPKVYG-IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+F E P+ Y I P+ +Y +IKS+C+SG I+ +M+ K + F +L+
Sbjct: 175 LFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSS 234
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
YK+ + E + M K G YN+RI S K + E K L++ M S G+KP+
Sbjct: 235 LYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPD 293
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+Y +L+ + + G L+ AKK++ + C P++ F + LC YE + +
Sbjct: 294 TISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFK 353
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
S+ +P F+T+K LV GL K +A LI +KK+FP S
Sbjct: 354 KSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKKFPPS 397
>gi|297798228|ref|XP_002866998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312834|gb|EFH43257.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 411
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 185/344 (53%), Gaps = 4/344 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLD-RMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
L+ E +P + L I S SP+ R A + V +L++ F+ I L+E K P +
Sbjct: 40 LRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKI 99
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
++ E F+ I YG+A+M DHAM+TFE+MD+YG +S + NALL C+ SK +++V +
Sbjct: 100 KE-EPFYSTLIRSYGRASMFDHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKKFDKVPQ 158
Query: 168 IFTEFPKVYG-IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+F E P+ Y I P+ +Y +IKS+C+SG I+ +M+ K + F +L+
Sbjct: 159 LFDEIPQRYNKIVPDKISYGILIKSYCDSGSPQKAIEIMRQMQGKGMEVTTIAFTTILSS 218
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
YK+ + E + M K G YN+RI S K + E K L++ M + G+KP+
Sbjct: 219 LYKKGELEVAESLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSTMGLKPD 277
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+Y +L+ + ++G L+ AKK++ + C P+S F + LC YE + +
Sbjct: 278 TISYNYLMTAYCEKGMLDEAKKVYEGLEGNNCAPNSATFRTLIFHLCYSRLYEQGYAIFK 337
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
S+ +P F+T+K L GL K+ +A LI +KK+FP S
Sbjct: 338 KSVYMHKIPDFNTLKHLAVGLVEKKKIDDAKGLIRTVKKKFPPS 381
>gi|255553141|ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543245|gb|EEF44777.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 400
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 201/372 (54%), Gaps = 6/372 (1%)
Query: 22 ATSSLLSAGDEAAA-----LTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRM 76
+ ++ +S+ D AA L K + +A+LK+E +P ++ ++ + +R
Sbjct: 13 SAAAAISSTDSPAAVSNRVLNQKPLEEPALAKLKAERDPEKLFNLFKANARNRLVIENRF 72
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
AF +S+L+ A F+ I LLE KT P R+ E F + I+LYG+A M HA+ TF +
Sbjct: 73 AFEDTISRLAGARRFDYIEHLLEHQKTLPQGRR-EGFIIRIIMLYGKAGMTKHAVDTFND 131
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M YG +++V + NA L + + E +K +E P+ + I + + N +IK+FC+
Sbjct: 132 MHMYGCKRTVKSFNAALKVLTETCDLEAIKAFLSEVPEKFDIILDIFSVNIIIKAFCKMS 191
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
Y ++ +M R IRP+ + L++ FYK ++E + +M G ++ +N
Sbjct: 192 ILDKAYLVMIQMERLGIRPDVVTYTTLISAFYKNDRWEISNGLWNLMVLKGCLPNLSTFN 251
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+RIQ L +++S +A ++ M GI P+ TY +I GFG+ G LE A+++++++
Sbjct: 252 VRIQHLVNIRQSWQANEVMLLMERIGISPDEVTYNLVIKGFGQAGYLEMARRVYSALHGK 311
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G +P+ + + LC+GGE++ A +C+ M K W + T+ +L+ GL ++ +A
Sbjct: 312 GYKPNVKIYQTMIHCLCKGGEFDLAYTMCKDCMKKSWFLNVDTIHTLLDGLKKNGQLDKA 371
Query: 377 NELIGLMKKRFP 388
++ L ++R P
Sbjct: 372 KMIVTLAQRRMP 383
>gi|255555097|ref|XP_002518586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542431|gb|EEF43973.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 194/371 (52%), Gaps = 21/371 (5%)
Query: 19 RNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRM-- 76
R +TS+ L+ G A A ++K L E N R+++ S DR
Sbjct: 10 RTCSTSTQLTTGTAARASSVKV--------LYKERNLKRLVE-----KFKKFSENDRFRT 56
Query: 77 ---AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+ + +L+ A FN I ++LE+ K D+ + E ++ I LYG++NM D++ +
Sbjct: 57 KTGIYEETIRRLAIAKRFNWIEEILEDQKKYKDIHK-EGYNARLIRLYGKSNMFDNSRKV 115
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM +++V + NALL C+ SK ++EV +F + PK I+P++ +YN VIK +C
Sbjct: 116 FDEMPDRNCKRTVVSFNALLAACVTSKKFDEVDGLFRKLPKELEIKPDTVSYNTVIKGYC 175
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
E G S+L EM K P+ F LL GFY + D ++ M + I +
Sbjct: 176 EMGALDKAISLLVEMEMKGNPPDLITFNTLLNGFYSNGLFVDGERIWSQMVQKSIVPDIR 235
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN ++ L +KR+++A LL M S+GIKP++ ++ LI GF KE NLE AK +
Sbjct: 236 SYNAKLLGLALVKRTKDAVLLLQEMKSKGIKPDVISFNALIKGFVKEENLEEAKYWYCET 295
Query: 314 TNGG--CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
N G C PD + F F+C+ G+ A ++ + +++ + + +K +V GL S
Sbjct: 296 RNSGGDCGPDKFTFTTLIPFVCEKGDLRFAFELSKDVISRKCLVDMALLKCVVEGLVKES 355
Query: 372 KVAEANELIGL 382
K+ +ANEL+ L
Sbjct: 356 KIQDANELVKL 366
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/272 (19%), Positives = 109/272 (40%), Gaps = 43/272 (15%)
Query: 119 VLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
VLY + N+ + + F E D++ R + ++K + ++ I + K
Sbjct: 31 VLYKERNLKRLVEKFKKFSENDRF--RTKTGIYEETIRRLAIAKRFNWIEEILEDQKKYK 88
Query: 177 GIEPNSETYN-KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
I + E YN ++I+ + +S + + EM ++ + F LLA K+++
Sbjct: 89 DI--HKEGYNARLIRLYGKSNMFDNSRKVFDEMPDRNCKRTVVSFNALLAACVTSKKFDE 146
Query: 236 VGKVLQMMEK-CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
V + + + K I YN I+ C++ ++A +LL M +G P+L T+ L+
Sbjct: 147 VDGLFRKLPKELEIKPDTVSYNTVIKGYCEMGALDKAISLLVEMEMKGNPPDLITFNTLL 206
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+GF G +++++ M + K V
Sbjct: 207 NGFYSNGLFVDGERIWSQM-----------------------------------VQKSIV 231
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P + + + GLA + + +A L+ MK +
Sbjct: 232 PDIRSYNAKLLGLALVKRTKDAVLLLQEMKSK 263
>gi|224070831|ref|XP_002303255.1| predicted protein [Populus trichocarpa]
gi|222840687|gb|EEE78234.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 199/379 (52%), Gaps = 6/379 (1%)
Query: 15 TVNYRNLATSSLLSAGDEAAALTIKEKKR-----ATIARLKSESNPFRILDICCGASLAP 69
T + N A S LS A + I+ + + + +LK+E +P ++ ++ +
Sbjct: 7 TRRFCNFAASVALSRSPAAVSNRIQNQNQKPLEEPALVKLKAERDPEKLFNLFKANAENR 66
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
+R AF VS+L+ AN F+ I LLE K P R+ E F V I+LYG+A MI H
Sbjct: 67 LVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKPLPQGRR-EGFMVRIIMLYGKAGMIKH 125
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ TF M +G +++V ++NA L +++ ++ E PK + IE + + N ++
Sbjct: 126 AIDTFYNMHLHGCKRTVKSVNAALKVLTGTRDLAAIEAFVNEAPKKFDIELDIFSVNIIV 185
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K+ CE+G+ Y ++ EM + +RP+ + L++ FYK ++ E + +M G
Sbjct: 186 KALCETGNLDKAYLLMVEMEKSGVRPDVITYTTLMSAFYKNNRSEIGNGLWNLMVLKGCL 245
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +N+RIQ L ++R+ A ++ ML GI P+ TY +I GF + G LE AK +
Sbjct: 246 PNLATFNVRIQYLVNIRRAWHANDVMRLMLKIGIVPDEVTYNLVIKGFFQTGKLEMAKMV 305
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ S+ G + + + ++LC+GGE++ A +CR M W + T+ +L+ GL
Sbjct: 306 YFSLRGKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRNNWFLNVDTIHTLLEGLKK 365
Query: 370 ISKVAEANELIGLMKKRFP 388
++ +A ++ L +KR P
Sbjct: 366 NGQLNKAKVIVTLAQKRVP 384
>gi|156070758|gb|ABU45173.1| unknown [Solanum melongena]
Length = 427
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/343 (32%), Positives = 182/343 (53%), Gaps = 3/343 (0%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLD-RMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
++LK+E +P + L+I S SPL R A V +L++++ F+ I LE K P
Sbjct: 36 SKLKAEHDPDKALEIYSSVSDRYISPLSSRYAQEYIVKRLAKSHRFSDIENFLESHKNSP 95
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
+ Q E F I YG A M DHA++ + +MD G +S + N LL C+ SK Y+ V
Sbjct: 96 KITQ-EPFLSSIIRSYGVARMFDHALKIYHQMDDLGTPRSAISFNVLLSACMHSKLYDRV 154
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
++F E P YG P+ +Y +I+S+CE G EM K + A F +L
Sbjct: 155 AQLFDEIPVKYGFLPDKVSYGVLIRSYCEMGLPEMAMERFKEMEEKGVEITAVAFTTILH 214
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
FYK+ K ++ +V M G V YN++I ++ + + E KAL++ M + G+KP
Sbjct: 215 SFYKKGKSDEAERVWNEMVSRGCGPDVGAYNVKIMNI-QGSKPEGVKALIEEMSNAGLKP 273
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ +Y +L+ + K ++ A+K++ + GC P++ F ++LC+ G +ET KV
Sbjct: 274 DTISYNYLMTCYCKNQLMDEAQKVYEDLKTNGCNPNAATFRTLIFYLCKKGRFETGYKVF 333
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
R S++ +P F T+K LV GL S+ +A + +KK+FP
Sbjct: 334 RESVSVHKIPDFITLKYLVEGLVKKSRWRDAKGMSRTVKKKFP 376
>gi|194707518|gb|ACF87843.1| unknown [Zea mays]
gi|219888485|gb|ACL54617.1| unknown [Zea mays]
Length = 196
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 127/187 (67%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M +K ++PN+ F LAGFYKE K++D+ KVL++M+K G + VYN+R+QSLCKL R
Sbjct: 1 MCKKGLKPNSITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSLCKLGR 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
S EA+AL+D M+ +G KPN TY HLI+GF KEG+LE AK+L+ M G DS +FM
Sbjct: 61 SGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDSDFYFM 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
Y+LC+G + +TAL + AK WVP FSTMK LV GLA S++ EA +I MK++F
Sbjct: 121 LIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEKMKEKF 180
Query: 388 PKSGDMW 394
P + W
Sbjct: 181 PDKTEGW 187
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K GL+ + L G + ++++K++ E K G + YN ++S C+ G
Sbjct: 1 MCKKGLKPNSITFTTALAGFYKEEKFDDIKKVL-ELMKKNGCGESLPVYNVRVQSLCKLG 59
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S +++ EM +K +PN + L+ GF KE E+ ++ + M + G+ + Y
Sbjct: 60 RSGEARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDSDFYF 119
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+ I LCK + A L + + ++ P T K L++G ++ AK + M
Sbjct: 120 MLIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGIIEKM 176
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Query: 63 CGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV--HSIVL 120
C L P S + F+ A++ + F+ I ++LE +K ++V S+
Sbjct: 2 CKKGLKPNS----ITFTTALAGFYKEEKFDDIKKVLELMKKNGCGESLPVYNVRVQSLCK 57
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
G++ A +EM K G + + N L+ G + EE KR++ E + G+
Sbjct: 58 LGRSG---EARALVDEMMKKGTKPNWVTYNHLIYGFCKEGDLEEAKRLYKEMGRK-GLVG 113
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+S+ Y +I C+ D + + E+ K+ P + +L+ G + ++ ++
Sbjct: 114 DSDFYFMLIYYLCKGDDLDTALGLYNEIAAKNWVPCFSTMKMLVNGLAGSSRIDEAKGII 173
Query: 241 QMMEK 245
+ M++
Sbjct: 174 EKMKE 178
>gi|156070779|gb|ABU45192.1| unknown [Petunia integrifolia subsp. inflata]
Length = 406
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 184/343 (53%), Gaps = 3/343 (0%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPL-DRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
++LK+E +P ++L+I S SPL R A V +L++++ F+ I LE K
Sbjct: 36 SKLKAEHDPDKVLEIYSSVSDRYISPLSSRYAQEYTVKRLAKSHRFSDIESFLESHKNSS 95
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
+ Q E F I YG A M DHA++ +++MD G +S + N LL C+ +K Y+ V
Sbjct: 96 KITQ-EPFLSSIIRSYGIAGMFDHALKIYDQMDDLGTPRSAISFNVLLSACVNTKQYDRV 154
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+++F E P YG P+ +Y +I+S+CE G L EM K + A F LL
Sbjct: 155 RQLFDEMPVKYGFLPDKVSYGILIRSYCEMGLPEKAMERLKEMEEKGVEITAITFTTLLH 214
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
FYK+ ++ KV M G V YN++I+++ + E KAL++ M + G+KP
Sbjct: 215 AFYKKGMGDEAEKVWNEMVNKGCGPDVGAYNVKIRNI-QGGDPEGVKALIEEMNNAGLKP 273
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ +Y +L+ + + G ++ A+K++ + GC P++ F +LC+ G +ET KV
Sbjct: 274 DTISYNYLMTCYCENGLMDEAQKVYEDLETNGCNPNAATFRSLILYLCKKGRFETGYKVF 333
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ S+ +P F+T+K LV GL K+ +A + +KK+FP
Sbjct: 334 KESVRVNKMPDFNTLKCLVEGLVKREKLKDAKGMSRTVKKKFP 376
>gi|296090624|emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 168/319 (52%), Gaps = 6/319 (1%)
Query: 71 SPLDRM-----AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S LDR + V +L+ A F I ++LEE K D+ + E F V I LYG++
Sbjct: 58 SELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISR-EGFAVRLISLYGKSG 116
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M DHA + F+EM +SV + NALL C+ SK ++++ F E P G+ P+ +Y
Sbjct: 117 MFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKIDGFFQELPGNLGVVPDVVSY 176
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ +FCE G S S+L EM + + P+ F LL FY+ Y D K+ +M+K
Sbjct: 177 NIIVNAFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKK 236
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+A V YN +++ + R EA L+D M + GIKP++ T L+ GF GNLE
Sbjct: 237 NNVAPNVRSYNAKLRGVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEE 296
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
AK+ ++ + P + FL + G+++ A ++C+ ++ W+ + ++ ++
Sbjct: 297 AKRWYSEIARNELPPVRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLE 356
Query: 366 GLASISKVAEANELIGLMK 384
GL SK+ EA EL + +
Sbjct: 357 GLVKESKIEEATELFLIFR 375
>gi|449468996|ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
gi|449484169|ref|XP_004156805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Cucumis sativus]
Length = 399
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 201/370 (54%), Gaps = 6/370 (1%)
Query: 24 SSLLSAGDEAAAL-----TIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAF 78
++++ + D AA+ K + + +LK+E +P ++ + + +R AF
Sbjct: 14 ATVIPSTDTTAAVLNHVQNSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAF 73
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
VS+L+ A F+ I LLE KT P R+ E F + I+LYG+A MI HA+ TF +M
Sbjct: 74 EDTVSRLAGARRFDYIEHLLEHQKTLPQGRR-EGFIIRIIMLYGKAEMIKHALDTFYDMH 132
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
YG ++V + NA+L + S++ ++ +E P+ + IE + + N ++K+FC+ G
Sbjct: 133 LYGCLRTVKSFNAVLKVLMKSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFL 192
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ Y ++ EM + I+P+ + L++ YK+ + E + +M G + +N+R
Sbjct: 193 NRAYLLMLEMEKLGIKPDVVTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVR 252
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
IQ L + +R+ +A L+ M + GI P+ TY +I GF + G L+ AK++++++ G
Sbjct: 253 IQHLIERRRAWDANKLMKMMRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGY 312
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
+P+ + ++LC+ ++ A +C+ +M K W P+ T+ SL+ GL + + +A
Sbjct: 313 KPNVKIYQTMIHYLCKSEDFNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAGKAQL 372
Query: 379 LIGLMKKRFP 388
++ L +KR P
Sbjct: 373 ILALARKRVP 382
>gi|224094727|ref|XP_002310210.1| predicted protein [Populus trichocarpa]
gi|222853113|gb|EEE90660.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 186/344 (54%), Gaps = 4/344 (1%)
Query: 47 ARLKSESNPFRILDICCGASLAPESP--LDRMAFSIAVSKLSQANHFNAISQLLEELKTR 104
+RL++E +P + L I AS SP + R A + V +L++++ F I L+E K+
Sbjct: 25 SRLRTEHDPDKALAIFSSASSNDSSPPVVSRYAQDLTVRRLAKSHRFADIESLMESHKSD 84
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
P ++Q E F I YG A M D A++T++EMD+ G +S + NALL CI SK Y++
Sbjct: 85 PKIKQ-EPFLSSLIRSYGVAGMFDQALKTYQEMDQLGTPRSCISFNALLSACIQSKLYKK 143
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
V +F E + Y + P++ +Y ++K++CE G +L EM +K + A +L
Sbjct: 144 VPVLFNEISEKYRVLPDTVSYGMLVKAYCEDGKPEKAIEVLGEMEKKGVEVTAIVCTPVL 203
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
Y + K ++ + L M + G VYN++I + + E K L++ M S G+K
Sbjct: 204 NCLYSKGKKDEAERFLDGMVERGCELDAVVYNVKISNAVS-QGPERVKELIEEMESYGLK 262
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ +Y +L+ + G +E AKK++ GC+ ++ F + LC+ GEYE ++
Sbjct: 263 PDTISYNYLMTSYCTSGMMEEAKKVYEEFRVHGCKANAATFRTLVFNLCKSGEYEKGYEI 322
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ S+ +P F+T+K LV GL K+ EA LI MKK+FP
Sbjct: 323 FKDSVKVHRIPDFNTLKYLVKGLVEKKKIKEAKGLIRTMKKKFP 366
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+S+ E VK + E + YG++P++ +YN ++ S+C SG + E R + NA
Sbjct: 242 VSQGPERVKELIEEM-ESYGLKPDTISYNYLMTSYCTSGMMEEAKKVYEEFRVHGCKANA 300
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
F L+ K +YE ++ + K N ++ L + K+ +EAK L+
Sbjct: 301 ATFRTLVFNLCKSGEYEKGYEIFKDSVKVHRIPDFNTLKYLVKGLVEKKKIKEAKGLIRT 360
Query: 278 MLSRGIKPNLDTYKHLIHGFG 298
M + L+ +K + G
Sbjct: 361 MKKKFPLNLLNAWKKVEENLG 381
>gi|359482337|ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Vitis vinifera]
Length = 405
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 185/350 (52%), Gaps = 1/350 (0%)
Query: 39 KEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLL 98
K + + +LK+E +P R+ + + +R AF VS+L+ A F+ I LL
Sbjct: 39 KPLEEPALVKLKAERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLL 98
Query: 99 EELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL 158
E KT P R+ E F V I+LYG+A MI A+ TF +M +G +++V + NA L
Sbjct: 99 EHQKTLPQGRR-EGFIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQ 157
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
S + E + + P +GIE + + N VIK+ C+ Y ++ EM + + P+
Sbjct: 158 SYDLEAIDLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVV 217
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ L++ FYK +++E + +M G + +N+RIQ L +R+ +A +L+ M
Sbjct: 218 TYTTLISAFYKSNRWEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMM 277
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
GI P+ TY +I GF + G LE AKK+++++ G +P+ + ++LC+GGE+
Sbjct: 278 EYLGITPDEVTYNLVIKGFCQAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHYLCKGGEF 337
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ A +C+ M + W + T+ L+ GL ++ +A ++ L +KR P
Sbjct: 338 DMAYTMCKDCMNRNWSLNVDTIYKLLEGLKGNGEIDKAKVILRLARKRVP 387
>gi|359496222|ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 167/308 (54%), Gaps = 2/308 (0%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
AV L++A F+ I +LE K ++ E F V + LYG+A M +HA + F+E+ K
Sbjct: 63 AVLTLAKAKKFSFIEDILEHQKQYNEI-STEVFAVRLMTLYGKAGMFEHAHKLFDELPKL 121
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
++V + NALL C+ SK ++++ F E P G+ P+ +YN ++ +FCE G S
Sbjct: 122 NCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDS 181
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S+L EM + + P+ F LL FY+ Y D K+ +M+K +A V YN +++
Sbjct: 182 ALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLR 241
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+ R EA L+D M + GIKP++ T L+ GF GNLE AK+ ++ + P
Sbjct: 242 GVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 301
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ FL + G+++ A ++C+ ++ W+ + ++ ++ GL SK+ EA EL+
Sbjct: 302 VRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELV 361
Query: 381 GLMK-KRF 387
L K K+F
Sbjct: 362 ELAKLKKF 369
>gi|359496212|ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 165/308 (53%), Gaps = 2/308 (0%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
AV L++A + I +LE + ++ E F V + LYG A M DHA + F+E+ K
Sbjct: 63 AVLTLAKAKKLSFIEDILEHQEQYNEI-STEVFAVRLMTLYGTAGMFDHAHKLFDELPKL 121
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
++V + NALL C+ SK ++++ F E P GI P+ +YN ++ +FCE G S
Sbjct: 122 NCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLDS 181
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S+L EM + + P+ F LL FY+ Y D K+ +M+K +A V YN +++
Sbjct: 182 ALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLR 241
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+ R EA L+D M + GIKP++ T L+ GF GNLE AK+ ++ + P
Sbjct: 242 GVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 301
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ FL + G++E A ++C+ ++ W+ + ++ ++ GL SK+ EA EL+
Sbjct: 302 VRATYMTLIPFLVEKGDFEMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELV 361
Query: 381 GLMK-KRF 387
L K K+F
Sbjct: 362 ELEKLKKF 369
>gi|147791423|emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 166/308 (53%), Gaps = 2/308 (0%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
AV L++A F+ I +LE K ++ E F V + LYG+A M +HA + F+E K
Sbjct: 24 AVLTLAKAKKFSFIEDILEHQKQYNEI-STEVFAVRLMTLYGKAGMFEHAHKLFDEXPKL 82
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
++V + NALL C+ SK ++++ F E P G+ P+ +YN ++ +FCE G S
Sbjct: 83 NCERTVVSFNALLSVCVXSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLDS 142
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S+L EM + + P+ F LL FY+ Y D K+ +M+K +A V YN +++
Sbjct: 143 ALSVLDEMEKVGLEPDLITFNTLLNAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAKLR 202
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+ R EA L+D M + GIKP++ T L+ GF GNLE AK+ ++ + P
Sbjct: 203 GVISENRMSEAVELIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPP 262
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ FL + G+++ A ++C+ ++ W+ + ++ ++ GL SK+ EA EL+
Sbjct: 263 VRATYMTLIPFLVEKGDFDMATELCKEVCSRRWLIEPALLQQVLEGLVKESKIEEATELV 322
Query: 381 GLMK-KRF 387
L K K+F
Sbjct: 323 ELAKLKKF 330
>gi|224054128|ref|XP_002298105.1| predicted protein [Populus trichocarpa]
gi|222845363|gb|EEE82910.1| predicted protein [Populus trichocarpa]
Length = 401
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 197/379 (51%), Gaps = 6/379 (1%)
Query: 15 TVNYRNLATSSLLSAGDEAAALTIKEKKR-----ATIARLKSESNPFRILDICCGASLAP 69
T +RN A + LL+ A + I+ + + + +LK+E +P ++ ++ +
Sbjct: 7 TRRFRNFAAAVLLTHSPAAVSNLIQNQNQKPLEEPALLKLKAERDPEKLFNLFKANAENK 66
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
+R AF VS+L+ AN F+ I LLE KT P R+ E + V I+LYG+A MI+H
Sbjct: 67 LVVENRFAFEDTVSRLAGANRFDYIEHLLEHQKTLPQGRR-EGYMVRIIMLYGKAGMIEH 125
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ TF M G +++V + NA L +++ ++ E PK + IE + + N ++
Sbjct: 126 AIDTFHNMHLRGCKRTVKSFNAALKVLTGTRDLATIETFVNEAPKKFDIEFDIFSVNIIV 185
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K+ CE G Y ++ EM + + P+ + L + +YK +K E + +M G
Sbjct: 186 KALCERGVLDKSYLLMVEMEKSGVTPDVITYTTLTSAYYKNNKAEIGNGLWNLMVLKGCL 245
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +N+RIQ L ++R+ A ++ M GI P+ +Y ++ GF + GNLE AK +
Sbjct: 246 PNLATFNVRIQYLVNIRRAWHANDVMRLMQKIGIVPDEVSYNLVLKGFFQVGNLEMAKLV 305
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ S+ G + + + ++LC+GGE++ A +CR M W + T+ +L+ GL
Sbjct: 306 YFSLRCKGHKFNVKVYQTMVHYLCKGGEFDLAYTMCRDCMRTNWFLNVDTIHTLLEGLKK 365
Query: 370 ISKVAEANELIGLMKKRFP 388
++ +A ++ L ++R P
Sbjct: 366 NGQLNKAKVILTLAQRRVP 384
>gi|225425092|ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial [Vitis vinifera]
gi|297738261|emb|CBI27462.3| unnamed protein product [Vitis vinifera]
Length = 386
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 178/330 (53%), Gaps = 10/330 (3%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R + ++ +LS++ + + +L++ KT P R E F + I+LY + M+DHA++TF
Sbjct: 61 RPLYQLSCRRLSRSGRLDLVERLIDHQKTLPHPR-TEGFWIRLIMLYSTSGMVDHALRTF 119
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + ++ + +L A+L + + +++ +F P G+ P +++Y+ V+K+FC+
Sbjct: 120 HQMVQDRVQLTEKSLCAILTVYLDNDLIDQLHTVFNTMPSEIGVSPGTKSYSLVLKAFCQ 179
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
D S +L +M P+ + +LL + + + ++L+ ++ G+
Sbjct: 180 QKDMESARKLLHKMEN----PDIGSYNVLLEAYSENGDGVEFDEILKEIKNKGLEHDCTT 235
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM- 313
YN RI CK K S AK LLD M+++G+KPN +Y +IHGF K G+ E A+K+ M
Sbjct: 236 YNHRILRFCKNKESVRAKKLLDEMVAKGVKPNSASYNMIIHGFCKVGDFESAQKVLGRML 295
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+G P S + + + GE+++AL +C+ + + WVP F M LV GL ISKV
Sbjct: 296 ADGYVAPCSISYITLFQHMVKEGEFDSALNMCKEIIRRKWVPPFEAMDGLVKGLVEISKV 355
Query: 374 AEANELIGLMKKRFP-KSGDMW---NAALP 399
A E++ MKKR + D W AALP
Sbjct: 356 EAAKEVVEKMKKRLKGNAADSWKTHEAALP 385
>gi|255555093|ref|XP_002518584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542429|gb|EEF43971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 377
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 167/316 (52%), Gaps = 1/316 (0%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
+S +PE +S V +LS A F+ + LE K D+ NE+F + I LYG+A
Sbjct: 45 SSESPEFRARHRFYSTIVRRLSFAKQFSMVEDFLEHQKNFADI-TNEQFTIRLISLYGKA 103
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
M+DHA + F+EM ++V + NALL CI S +++V+ +FP GI P+ +
Sbjct: 104 GMLDHAHRLFDEMPDLKCTRTVRSFNALLSACIDSGKFDKVQGFLRDFPVKLGITPDVVS 163
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N VIK +CE G+ S +L EM ++ I P+ F LL GFY ++ D K+ +ME
Sbjct: 164 FNIVIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFYGNGRFVDGEKIWTLME 223
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ V YN R++ L R EA LL M ++GI+P++ +Y +I G + N+E
Sbjct: 224 SKNVVPNVRSYNSRLRGLELENRVMEAVELLGEMENKGIRPDVMSYNAVIKGLCNDENVE 283
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
K + + G PD + +L Q G+ + A+++C M KG + + + + +V
Sbjct: 284 EVKNWYRKLKENGRMPDRVTYMTLIPYLRQKGDLDGAVELCIEIMNKGLLVNATLFQHVV 343
Query: 365 TGLASISKVAEANELI 380
L +S+V EA +L+
Sbjct: 344 DELVKLSRVEEAKDLV 359
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L D + GI P++ ++ +I G+ + GNL+ + M G EPD F
Sbjct: 148 LRDFPVKLGITPDVVSFNIVIKGYCEIGNLDSGVLVLCEMEKRGIEPDLITFNTLLNGFY 207
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
G + K+ +K VP+ + S + GL ++V EA EL+G M+ + + M
Sbjct: 208 GNGRFVDGEKIWTLMESKNVVPNVRSYNSRLRGLELENRVMEAVELLGEMENKGIRPDVM 267
Query: 394 -WNAAL 398
+NA +
Sbjct: 268 SYNAVI 273
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N + A++ EM+ G+R V + NA++ G +N EEVK + + K G P+ T
Sbjct: 245 NRVMEAVELLGEMENKGIRPDVMSYNAVIKGLCNDENVEEVKNWYRKL-KENGRMPDRVT 303
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
Y +I + GD + E+ K + NAT F ++ K + E+ +++
Sbjct: 304 YMTLIPYLRQKGDLDGAVELCIEIMNKGLLVNATLFQHVVDELVKLSRVEEAKDLVE 360
>gi|224134358|ref|XP_002327818.1| predicted protein [Populus trichocarpa]
gi|222836903|gb|EEE75296.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 181/343 (52%), Gaps = 3/343 (0%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPL-DRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
++L++E +P + L I AS SP R A + V +L+ ++ F I L+E KT P
Sbjct: 27 SKLRTEHDPDKALAIYSAASNNDSSPAASRYAQDLTVRRLATSHRFTDIESLIESRKTDP 86
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
++Q E F I YG A M D AM+T+ +MD+ G +S + NALL C+ S+ Y +V
Sbjct: 87 KIKQ-EPFLSSLIRSYGVAGMFDQAMKTYHQMDQLGTPRSSISFNALLSACVQSRLYNKV 145
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+F E + Y + P+ +Y ++KS+CE G +L EM +K + + LL
Sbjct: 146 PGLFDEISEKYRVLPDKVSYGILVKSYCEDGKPDKANEVLREMEKKGVEVTTVVYTTLLN 205
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
Y + K E+ + M K G VYN++I + K + E K L++ M + +KP
Sbjct: 206 CLYSKGKNEEAERFWHAMVKRGCELDAAVYNVKISNAMK-QGPERVKELIEDMENSALKP 264
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ +Y +LI + G +E AKK++ + GC+ ++ F + LC+ GEYE ++
Sbjct: 265 DTISYNYLITSYCMTGMMEDAKKVYEGLEGYGCKANAATFRTLVFHLCKNGEYEKGYRLF 324
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ S+ +P F+T+K L GLA K+ EA LI MKK+FP
Sbjct: 325 KESVRVHRIPDFNTLKYLAEGLAEKKKMKEAKGLIRTMKKKFP 367
>gi|356521277|ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 379
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 164/307 (53%), Gaps = 1/307 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+ V +L+ A F + +LE K D+ NE F I LYG++ M HA + F+EM
Sbjct: 59 YEDTVRRLAGARRFRWVRDILEHQKQYSDI-SNEGFSARLISLYGKSGMTKHARKVFDEM 117
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ ++V +LNALL + S Y+ V+ +F + P I+P+ TYN +IK+FCE G
Sbjct: 118 PQRNCSRTVLSLNALLAAYLHSHKYDVVQELFRDLPTQLSIKPDLVTYNTIIKAFCEKGS 177
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
S S+L E+ K + P++ F LL G Y + ++E+ KV + M +A GV Y
Sbjct: 178 FDSALSVLREIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMSVNNVAPGVRSYCS 237
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
++ L ++K++ EA L M G+KP+L +I GF EGNL+ AKK F +
Sbjct: 238 KLVGLAEVKKAGEAVELFREMEKVGVKPDLFCINAVIKGFVNEGNLDEAKKWFGEIAKSE 297
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
+PD + + FLC+ G+++TA+++C+ + ++ +V LAS + EA
Sbjct: 298 YDPDKNTYSIIVPFLCEKGDFKTAIEMCKEIFNNRCRVDATLLQGVVDKLASEGMITEAK 357
Query: 378 ELIGLMK 384
E++ + K
Sbjct: 358 EIVEIGK 364
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 77/219 (35%), Gaps = 34/219 (15%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R E K Y N ++I + +SG + + EM +++ LLA
Sbjct: 76 RDILEHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAA 135
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ HKY+ V ++ + D IKP+
Sbjct: 136 YLHSHKYDVVQELFR----------------------------------DLPTQLSIKPD 161
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
L TY +I F ++G+ + A + + G PDS F L G +E KV
Sbjct: 162 LVTYNTIIKAFCEKGSFDSALSVLREIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWE 221
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P + S + GLA + K EA EL M+K
Sbjct: 222 QMSVNNVAPGVRSYCSKLVGLAEVKKAGEAVELFREMEK 260
>gi|359496226|ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Vitis vinifera]
Length = 382
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 160/317 (50%), Gaps = 6/317 (1%)
Query: 71 SPLDRM-----AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S LDR + V +L+ A F I ++LEE K D+ + E F V I LYG++
Sbjct: 50 SELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISR-EGFAVRLITLYGKSG 108
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M DHA + F+EM +SV + NALL C+ SK +++V+ F+E P +EP+ +Y
Sbjct: 109 MFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELPSKLSVEPDLVSY 168
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI C+ G S +L EM +KS+ P+ F LL G Y ++ D K+ MEK
Sbjct: 169 NIVINGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEK 228
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
I + YN ++ L KR E L++ M ++GIKP+ ++ LI GF +G ++
Sbjct: 229 KNILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVDE 288
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A + M C PD F C+ G ++ A ++C+ + + +++ V
Sbjct: 289 ATNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAVD 348
Query: 366 GLASISKVAEANELIGL 382
GL KV EA +L+ L
Sbjct: 349 GLVKGGKVVEAKKLVQL 365
>gi|449479641|ref|XP_004155661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 167/306 (54%), Gaps = 1/306 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F V L+ F+ I ++E K D++ E F I LYG+A M HA + F+E
Sbjct: 76 TFDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKV-EGFATRLIKLYGKAGMFSHARKLFDE 134
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+ + ++V + N+LL C+ SK +++V++IF E P+ I+ + +YN VI +FCE
Sbjct: 135 LPELNCERTVKSFNSLLASCVKSKEFDQVEKIFREVPQEVSIKADVISYNIVINAFCEMD 194
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+M + + PN F LL Y++ ++ D +V ME IA + YN
Sbjct: 195 ALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYN 254
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
R++ + KR ++ LL M + IKP++ +Y LI GF ++G+LE AKK + +
Sbjct: 255 ARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKES 314
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+P + + + LC+ G++++ L++C+ ++ KG+V H + ++ +V GLA +SK+ EA
Sbjct: 315 EVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVNGLAEVSKIEEA 374
Query: 377 NELIGL 382
+L+ L
Sbjct: 375 KDLVEL 380
>gi|297842851|ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335148|gb|EFH65566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 397
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 182/370 (49%), Gaps = 7/370 (1%)
Query: 22 ATSSLLSAGDEAAALTIKEKKRATIARLKSESNP---FRILDICCGASLAPESPLDRMAF 78
AT + D +K + + +LKSE +P F++ L E +R AF
Sbjct: 18 ATGIAYVSTDSNQIQGLKPLEEPALVKLKSERDPEKLFKLFQANATNRLVIE---NRFAF 74
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
VS+L+ A + I LLE KT P R+ E F V I+LYG+A M A+ TF MD
Sbjct: 75 EDTVSRLAGAGRLDFIEDLLEHQKTLPQGRR-EGFIVRIIMLYGKAGMTKQALDTFYNMD 133
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
YG ++SV + NA L + ++ + P Y I+ ++ ++N IKSFCE G
Sbjct: 134 LYGCKRSVKSFNAALQVLSFKPDLHTIREFLHDAPAKYRIDIDAVSFNIAIKSFCELGIL 193
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
Y + EM + ++P+ + L++ FYK + + +M G + +N+R
Sbjct: 194 DGAYMAMREMEKSGLKPDVVTYTTLISAFYKHERCVIGNGLWNLMVLKGCRPNLTTFNVR 253
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
IQ L +R+ +A LL M ++P+ TY +I GF A++++ +M G
Sbjct: 254 IQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPHMAERVYTAMHGKGY 313
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
+P+ + ++LC+ G ++ A +C+ M K W P+ T++ L+ GL ++ +A
Sbjct: 314 KPNVKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKDQLDQAKS 373
Query: 379 LIGLMKKRFP 388
++GL+ KR P
Sbjct: 374 IMGLVHKRVP 383
>gi|359496216|ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial [Vitis vinifera]
Length = 383
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 161/318 (50%), Gaps = 7/318 (2%)
Query: 71 SPLDRM-----AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S LDR + V +L+ A F I ++LEE K D+ + E F V I LYG++
Sbjct: 50 SELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISR-EGFAVRLISLYGKSG 108
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M DHA + F+EM +SV + NALL C+ SK +++V+ F+E P +EP+ +Y
Sbjct: 109 MFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELPSKLSVEPDLVSY 168
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VIK C+ G S +L EM +KS+ P+ F LL G Y ++ D K+ MEK
Sbjct: 169 NIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNGCYTSGRFLDGEKIWGRMEK 228
Query: 246 CGIASGVNVYNIRIQSLCKL-KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
I + YN ++ L KR E L++ M ++GIKP+ ++ LI GF +G ++
Sbjct: 229 KNILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVD 288
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M C PD F C+ G ++ A ++C+ + + +++ V
Sbjct: 289 EATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAV 348
Query: 365 TGLASISKVAEANELIGL 382
GL KV EA +L+ L
Sbjct: 349 DGLVKGGKVVEAKKLVQL 366
>gi|224114223|ref|XP_002316701.1| predicted protein [Populus trichocarpa]
gi|222859766|gb|EEE97313.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 164/302 (54%), Gaps = 1/302 (0%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+ +LS + F+ + ++LE+ K D+ + E F+ I LYG M DHA + F+EM +
Sbjct: 70 TIRRLSVSRKFDYVEEILEDQKQYKDMSK-EGFNARLISLYGSVGMFDHARKVFDEMRER 128
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
++V + NALL C+ SKN++EV+ +F K IEP+ +YN VIK+FCE G S
Sbjct: 129 QCARTVMSFNALLGACLSSKNFDEVEGLFRGLSKEIKIEPDLISYNTVIKAFCEMGSLDS 188
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S+L EM+RK + P+ F LL GFY + ++ D ++ + M++ + V YN ++
Sbjct: 189 AVSLLDEMKRKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDVRSYNAKLL 248
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L KR E+ +++ M S GI+ + +Y LI GF EG+L+ AK + + GC+
Sbjct: 249 GLTLEKRMEDVVKVVEEMKSEGIQLDTFSYSALIRGFVNEGDLKNAKHWYLEIGRSGCKR 308
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D F Q G++ A +C+ + + + ++S+V LA S++ A EL+
Sbjct: 309 DKLTLEGLIPFALQKGDFMFAYGICKDVLCSKLLVQNALIQSVVDALAKESRMEAAKELV 368
Query: 381 GL 382
L
Sbjct: 369 NL 370
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 3/154 (1%)
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK--PNLDTY 290
++ KV M + A V +N + + K +E + L G LS+ IK P+L +Y
Sbjct: 115 FDHARKVFDEMRERQCARTVMSFNALLGACLSSKNFDEVEGLFRG-LSKEIKIEPDLISY 173
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+I F + G+L+ A L M G EPD F + G + ++
Sbjct: 174 NTVIKAFCEMGSLDSAVSLLDEMKRKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKE 233
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
K P + + + GL ++ + +++ MK
Sbjct: 234 KNVEPDVRSYNAKLLGLTLEKRMEDVVKVVEEMK 267
>gi|357455193|ref|XP_003597877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162918|gb|ABD28713.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486925|gb|AES68128.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 439
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 183/343 (53%), Gaps = 6/343 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
LKSE +P ++ I + P +R AF VS+L+ A F+ I QLLE+ K P R
Sbjct: 83 LKSEWDPHKLFHIFKSNATNPIVVENRFAFYDTVSRLAGAKRFDYIEQLLEQQKKLPQSR 142
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
+ E F V I LYG A MI HA+ TF +M + ++V + NA L S++++E+ R
Sbjct: 143 R-EGFVVRIITLYGNAGMIQHALNTFYQMGDFRCVRTVKSFNATLNVLAKSRDFDEISRF 201
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGF 227
E P+ + I + + N +K+FCE+ Y + + + K ++P+ + L++ F
Sbjct: 202 LNEVPRRFDIRLDVYSVNIAVKAFCEAEKLKEAYLFMLDCVNNKGVKPDVVTYTTLISAF 261
Query: 228 YKEHKYEDVGKVL--QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
Y +HK ++G L QM+ K G+ ++ +N+RIQ L ++R +A L+ M G+ P
Sbjct: 262 Y-DHKRWEIGNGLWNQMVLK-GVMPNLHTFNVRIQFLVTVRRVWDANKLMALMQRNGVTP 319
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ T +I GF + G E A ++++++ + G + + + + LC+ G++ A +C
Sbjct: 320 DEVTLVLVIKGFFRAGYPEMAMRVYSALHDKGYKISANIYQTMIHNLCKRGDFSQAYTLC 379
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ SM K W P+ T+ L+ GL K+ +A ++ L + R P
Sbjct: 380 KDSMRKNWFPNVDTIFMLLEGLKKSGKINKAKVIVALAEGRKP 422
>gi|224076667|ref|XP_002304978.1| predicted protein [Populus trichocarpa]
gi|222847942|gb|EEE85489.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 10/345 (2%)
Query: 41 KKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEE 100
KKR T+ ++ S C S + S D ++I V +L + N + I+++L+
Sbjct: 31 KKRGTLEKMVSRFKK-------CSESSSFRSRYD--IYAITVKRLIKYNRLSMINEILDH 81
Query: 101 LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
K PD+ NE F H I LYG+A M D A + F+EM ++V + NALLL CI ++
Sbjct: 82 QKNFPDM-TNETFTAHLIYLYGKAGMFDDARKLFDEMPDLKCPRTVFSFNALLLACINAR 140
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
++E+K++ +F GI + +Y+ I FC+ GD S + EM + + PN F
Sbjct: 141 RFDEIKKLLADFRSELGITFDVVSYSIAINGFCKMGDLVSAEMVFDEMIKSDVEPNLITF 200
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
LL GFY K+ D ++ M + + V YN ++ +L R +EA +++ M
Sbjct: 201 NTLLNGFYLNGKFADGERIWSRMVEMNVVPDVRSYNAKLHALALENRMKEAIEVVEEMRD 260
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G++ ++ ++ LI GF +LE AK+ + M GCEP+ F FLC+ G+
Sbjct: 261 KGLELDVFSFNALIRGFLNGEDLEEAKQWYGEMRRHGCEPNRVTFQFLIPFLCEKGDVGF 320
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A+++C K W ++ +V L +K+ +A +L+ KK
Sbjct: 321 AVEICEEIFDKKWHARAEVLQLVVNRLVMEAKIQDAEKLVQDGKK 365
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 1/205 (0%)
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+ Y +K + S + IL + N T L+ + K ++D K+
Sbjct: 57 DIYAITVKRLIKYNRLSMINEILDHQKNFPDMTNETFTAHLIYLYGKAGMFDDARKLFDE 116
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGKEG 301
M V +N + + +R +E K LL S GI ++ +Y I+GF K G
Sbjct: 117 MPDLKCPRTVFSFNALLLACINARRFDEIKKLLADFRSELGITFDVVSYSIAINGFCKMG 176
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+L A+ +F M EP+ F G++ ++ + VP +
Sbjct: 177 DLVSAEMVFDEMIKSDVEPNLITFNTLLNGFYLNGKFADGERIWSRMVEMNVVPDVRSYN 236
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
+ + LA +++ EA E++ M+ +
Sbjct: 237 AKLHALALENRMKEAIEVVEEMRDK 261
>gi|413934837|gb|AFW69388.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 529
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 17/356 (4%)
Query: 33 AAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFN 92
A A +E+++ + R+K E +P R+ + + +R AF AV++L+ A +
Sbjct: 170 ATAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRND 229
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
+ ++LE+ K P + HA++TF+EM YG ++ +LNA
Sbjct: 230 LVEEILEQHKALP-----------------RGGGKGHALRTFQEMGMYGCPRTAKSLNAT 272
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ + ++ ++E +F E P+ Y +E + + N V+K FC+ GD + Y ++ M R
Sbjct: 273 MKVLLRARMFDEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRVMQGMERAG 332
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+R + + L+A FYK ++E + +M G + YN+RIQ L R +A
Sbjct: 333 LRSDVITYMTLMAAFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVNRGRGWQAN 392
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
+ + GIKP+ TY +I GF G E AK +F +M GC+P+S + ++L
Sbjct: 393 EMARKIYVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYL 452
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
C+ +++ A ++C+ SM K W P T+ L+ GL +ISK E++ L+ R P
Sbjct: 453 CERRDFDLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKP 508
>gi|413934838|gb|AFW69389.1| hypothetical protein ZEAMMB73_912579 [Zea mays]
Length = 590
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 17/356 (4%)
Query: 33 AAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFN 92
A A +E+++ + R+K E +P R+ + + +R AF AV++L+ A +
Sbjct: 170 ATAAAKEEQEQPVLVRIKHERDPERLYQLFRANAHNRLLVENRFAFEDAVARLAGARRND 229
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
+ ++LE+ K P + HA++TF+EM YG ++ +LNA
Sbjct: 230 LVEEILEQHKALP-----------------RGGGKGHALRTFQEMGMYGCPRTAKSLNAT 272
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ + ++ ++E +F E P+ Y +E + + N V+K FC+ GD + Y ++ M R
Sbjct: 273 MKVLLRARMFDEALSLFEEGPEKYDVEVDDISCNTVVKMFCDMGDLRAAYRVMQGMERAG 332
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+R + + L+A FYK ++E + +M G + YN+RIQ L R +A
Sbjct: 333 LRSDVITYMTLMAAFYKCGRHEVGDGLWNLMRLRGWVPTLATYNVRIQFLVNRGRGWQAN 392
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
+ + GIKP+ TY +I GF G E AK +F +M GC+P+S + ++L
Sbjct: 393 EMARKIYVAGIKPDEITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNSKVYQTMVHYL 452
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
C+ +++ A ++C+ SM K W P T+ L+ GL +ISK E++ L+ R P
Sbjct: 453 CERRDFDLAFRLCKDSMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKP 508
>gi|18398767|ref|NP_565439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216725|sp|Q9ZU67.1|PP162_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g18520, mitochondrial; Flags: Precursor
gi|4218007|gb|AAD12215.1| expressed protein [Arabidopsis thaliana]
gi|21617890|gb|AAM66940.1| membrane-associated salt-inducible protein like [Arabidopsis
thaliana]
gi|330251683|gb|AEC06777.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 418
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 177/344 (51%), Gaps = 8/344 (2%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLD-RMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
++L+ +P + L I S SPL R A + V +L+++ F+ I L+E K P
Sbjct: 38 SKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNP 97
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
++ E F I YG+A+M DHAM+ FEEMDK G ++V + NALL C+ S +E V
Sbjct: 98 KIK-TETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERV 156
Query: 166 KRIFTEFPKVY-GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
++F EFP+ Y I P+ +Y +IKS+C+SG I+ +M K + F +L
Sbjct: 157 PQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTIL 216
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
YK ++ + M G VYN+R+ + K + E K L++ M S G+K
Sbjct: 217 GSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLK 275
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ +Y +L+ + +G + AKK++ G +P++ F + LC G Y+ L V
Sbjct: 276 PDTVSYNYLMTAYCVKGMMSEAKKVY----EGLEQPNAATFRTLIFHLCINGLYDQGLTV 331
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ S +P F T K L GL +++ +A + ++KK+FP
Sbjct: 332 FKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVARIVKKKFP 375
>gi|356524760|ref|XP_003530996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Glycine max]
Length = 381
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 164/319 (51%), Gaps = 6/319 (1%)
Query: 71 SPLDRM-----AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S +DR + V +L+ A F I +LE K D+ NE F I LYG++
Sbjct: 49 SDIDRFRKKTGIYEDTVRRLAGARRFRWIRDILEHQKQYSDI-SNEGFSARLISLYGKSG 107
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M HA + F+EM + ++V +LNALL + S+ Y+ V +F + P I+P+ TY
Sbjct: 108 MTKHARKVFDEMPQRNCSRTVLSLNALLAAYLHSRKYDIVGELFRDLPTQLSIKPDLVTY 167
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +IK+FCE G S S+ E+ K + P++ F LL G Y + ++E+ KV + M
Sbjct: 168 NTIIKAFCEKGSFDSALSVFQEIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWEQMGV 227
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+A GV Y ++ L ++K+ EA L M G+KP+L +I GF EGNL+
Sbjct: 228 KNVAPGVRSYCSKLVGLAEVKKMGEAVVLFREMEKLGVKPDLFCINAVIKGFVNEGNLDE 287
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
AKK F + +PD + + FLC+ G+++TA+ +C+ + ++ +V
Sbjct: 288 AKKWFGEIAKFEYDPDRNTYSIIVPFLCEKGDFKTAIDMCKEIFNNRCRVDATLLQGVVD 347
Query: 366 GLASISKVAEANELIGLMK 384
LAS EA E++ + K
Sbjct: 348 KLASEGMDTEAKEIVEIGK 366
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 79/219 (36%), Gaps = 34/219 (15%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R E K Y N ++I + +SG + + EM +++ LLA
Sbjct: 78 RDILEHQKQYSDISNEGFSARLISLYGKSGMTKHARKVFDEMPQRNCSRTVLSLNALLAA 137
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ KY+ VG++ + D IKP+
Sbjct: 138 YLHSRKYDIVGELFR----------------------------------DLPTQLSIKPD 163
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
L TY +I F ++G+ + A +F + G PDS F L G +E KV
Sbjct: 164 LVTYNTIIKAFCEKGSFDSALSVFQEIEEKGLSPDSITFNTLLDGLYSKGRFEEGEKVWE 223
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
K P + S + GLA + K+ EA L M+K
Sbjct: 224 QMGVKNVAPGVRSYCSKLVGLAEVKKMGEAVVLFREMEK 262
>gi|224114227|ref|XP_002316702.1| predicted protein [Populus trichocarpa]
gi|222859767|gb|EEE97314.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 188/358 (52%), Gaps = 3/358 (0%)
Query: 25 SLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSK 84
+L ++ AA+ TIK K T + E N +++ AS+ + + ++ +
Sbjct: 11 ALPASTSAAASDTIKAKSYWT--EIIKERNLEHLVEKFKNASVDEDFRTKTFVYKNSIHR 68
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQ 144
L+ A FN + ++LE+ K D+ + E F+ I LYG A M D+A + F+EM + +
Sbjct: 69 LAAARKFNYVEEILEDQKQYEDIYK-EGFNARLISLYGVAGMFDNARKVFDEMFERKCAR 127
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
+V + NALL C+ SK ++E + +F K IEP+ +YN V+K+FCE G S ++
Sbjct: 128 TVVSFNALLGACVNSKKFDEAEGLFKGLSKELEIEPDLVSYNTVLKAFCEMGSMDSAATL 187
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L EM +K + P+ F LL GFY + ++ D ++ + M++ + + YN ++ L
Sbjct: 188 LDEMEKKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEKNVEPDIRSYNAKLLGLTL 247
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
KR E+ +++ M S GI+ + +Y LI GF EG+L+ AK + + GC+ D
Sbjct: 248 EKRMEDVVKVVEEMKSEGIQLDTFSYSTLIRGFVNEGDLKKAKHWYHEIGRSGCKRDKLT 307
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F Q G++ A +C+ + + + ++S+V LA S++ EA +L+GL
Sbjct: 308 LEGLIPFALQKGDFMFAYGICKDVLCSKLLVQNALIQSVVDALAKDSRLEEAKKLVGL 365
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYK 291
+++ KV M + A V +N + + K+ +EA+ L G+ I+P+L +Y
Sbjct: 110 FDNARKVFDEMFERKCARTVVSFNALLGACVNSKKFDEAEGLFKGLSKELEIEPDLVSYN 169
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
++ F + G+++ A L M G EPD F + G + ++ K
Sbjct: 170 TVLKAFCEMGSMDSAATLLDEMEKKGLEPDLITFNTLLHGFYAKGRFVDGERIWEQMKEK 229
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
P + + + GL ++ + +++ MK
Sbjct: 230 NVEPDIRSYNAKLLGLTLEKRMEDVVKVVEEMK 262
>gi|147791424|emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
Length = 383
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 159/318 (50%), Gaps = 7/318 (2%)
Query: 71 SPLDRM-----AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S LDR + V +L+ A F I ++LEE K D+ + E F V I LYG++
Sbjct: 50 SELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISR-EGFAVRLISLYGKSG 108
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M DHA + F+EM +SV + N LL C+ SK +++V+ F+E P +EP+ +Y
Sbjct: 109 MFDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELPSKLSVEPDLVSY 168
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VIK C+ G S +L EM +KS+ P+ F LL Y ++ D K+ MEK
Sbjct: 169 NIVIKGLCDMGSMDSAVGMLDEMEKKSLEPDLITFNTLLNRXYTSGRFLDGEKIWGRMEK 228
Query: 246 CGIASGVNVYNIRIQSLCKL-KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
I + YN ++ L KR E L++ M ++GIKP+ ++ LI GF +G ++
Sbjct: 229 KNILPDIRSYNAKLVGLVSSEKRMLEGIGLVEEMQTKGIKPDGYSFNALIKGFCNDGKVD 288
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M C PD F C+ G ++ A ++C+ + + +++ V
Sbjct: 289 EATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFELCKEIFNRKCLVDEVLLQNAV 348
Query: 365 TGLASISKVAEANELIGL 382
GL KV EA +L+ L
Sbjct: 349 DGLVKGGKVVEAKKLVQL 366
>gi|449479638|ref|XP_004155660.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 398
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 189/372 (50%), Gaps = 22/372 (5%)
Query: 17 NYRNLATSSLLSAGDE----AAALTIKEKKRATIAR--LKSESNPFRILDICCGASLAPE 70
N NL+ SSL + + A LT + + + + R + SES FR
Sbjct: 25 NKPNLSLSSLATKKSKKSPTATPLTDENRLQKLVQRFIINSESKQFR----------RKN 74
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D +AV K F+ I +++E K ++++ E F + I LYG+A M A
Sbjct: 75 DTYDSTVRFLAVRK-----KFSMIEEIIEAQKKYDEIKE-EGFVIRLIRLYGKAGMFSQA 128
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F+E+ + ++V + NALL+ C+ SK +++V++IF E P+ IE + +YN VI
Sbjct: 129 RKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVIN 188
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++CE D M + + P+ F LL Y++ ++ D + ME IA
Sbjct: 189 AYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAP 248
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN R++ + KR ++ LL M + IKP++ Y LI F K+G+LE AKK +
Sbjct: 249 DLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWY 308
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ +P++ + LC+ G++++ L++C+ ++ K +V H + ++ +V GLA +
Sbjct: 309 YKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEV 368
Query: 371 SKVAEANELIGL 382
SK EA +L+ L
Sbjct: 369 SKTEEAKDLVEL 380
>gi|388512253|gb|AFK44188.1| unknown [Medicago truncatula]
Length = 376
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 164/315 (52%), Gaps = 6/315 (1%)
Query: 71 SPLDRM-----AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S +DR + V +L+ A F + ++E K+ D+ NE F I LYG++N
Sbjct: 44 SDIDRFRKKNGIYEDTVRRLAGAKRFRWVRDIIEHQKSYADI-SNEGFSARLITLYGKSN 102
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M HA + F+EM + +SV +LNALL + SK Y+ V+R+F + P ++P+ +Y
Sbjct: 103 MHRHAQKLFDEMPQRNCERSVLSLNALLAAYLHSKQYDVVERLFKKLPVQLSVKPDLVSY 162
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N IK+ E G S S+L EM + + + F LL G Y + ++ED K+ + + +
Sbjct: 163 NTYIKALLEKGSFDSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDGEKLWEKLGE 222
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+ + YN R+ L KR+ EA + M +G+KP+L ++ LI GF EGNL+
Sbjct: 223 KNVVPNIRTYNARLLGLAVAKRAGEAVEFYEEMEKKGVKPDLFSFNALIKGFANEGNLDE 282
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
AKK F + +P + + FLC+ G+ +TA+++ + S ++ +V
Sbjct: 283 AKKWFGEIEKSEHDPSKRTYAIIVPFLCEKGDLKTAIEMVKQIFLTRCRVDVSLLRIVVG 342
Query: 366 GLASISKVAEANELI 380
L S S V+EA E++
Sbjct: 343 KLVSESMVSEAKEIV 357
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+KP+L +Y I ++G+ + A + M G E D F L G +E
Sbjct: 155 VKPDLVSYNTYIKALLEKGSFDSAVSVLEEMEKDGVESDLITFNTLLDGLYSKGRFEDGE 214
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
K+ K VP+ T + + GLA + EA E M+K+
Sbjct: 215 KLWEKLGEKNVVPNIRTYNARLLGLAVAKRAGEAVEFYEEMEKK 258
>gi|317106734|dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
Length = 399
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 178/343 (51%), Gaps = 1/343 (0%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
+ +LK+E +P ++ ++ + +R AF VS+L+ A F+ I LLE KT P
Sbjct: 41 LIKLKAERDPEKLFNLFKANAQNRLVIENRFAFEDTVSRLAGARRFHYIENLLEHQKTLP 100
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
R+ E F V I+LY +A M+ HA+ TF +M YG +++V + NA L ++N +
Sbjct: 101 QGRR-EGFIVRIIMLYAKAGMVKHALNTFYDMHLYGCKRTVKSFNAALKVLTGTRNMVAI 159
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ E P+ + I + + N +IK+ CE G Y ++ + ++ I + + L++
Sbjct: 160 QDFLCEAPEKFDITMDIFSINIIIKALCEMGYLDKAYLVMVQFQKSGIEADVITYTTLIS 219
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
Y+ + + +M G + +N+RIQ L ++S EA ++ M GI P
Sbjct: 220 ASYRNKLWMIGNGLWNLMVLKGCKPNLATFNVRIQYLVNSRQSWEANDVMRLMQRIGIAP 279
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ TY +I GF G LE AK++++++ +P+ + ++LC+GGE++ A +C
Sbjct: 280 DQVTYNLVIKGFCLAGYLEMAKRVYSALQGEVYKPNFKIYQTMIHYLCKGGEFDLAYTMC 339
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ M KGW H T+ +L+ GL + +A ++ L K++ P
Sbjct: 340 KDCMGKGWYLHVDTIHALLNGLMKNGHLGKAKLIVTLAKRKVP 382
>gi|15220068|ref|NP_178132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806404|sp|Q8GW57.2|PP134_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80150, mitochondrial; Flags: Precursor
gi|332198242|gb|AEE36363.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 397
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 177/351 (50%), Gaps = 1/351 (0%)
Query: 38 IKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQL 97
+K + + +LKSE +P ++ ++ + +R AF VS+L+ A + I L
Sbjct: 34 LKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDL 93
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
LE KT P R+ E F V I+LYG+A M A+ TF MD YG ++SV + NA L
Sbjct: 94 LEHQKTLPQGRR-EGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLS 152
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ + + + P YGI+ ++ ++N IKSFCE G Y + EM + + P+
Sbjct: 153 FNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDV 212
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ L++ YK + + +M G + +N+RIQ L +R+ +A LL
Sbjct: 213 VTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLL 272
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M ++P+ TY +I GF + A++++ +M G +P+ + ++LC+ G
Sbjct: 273 MPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGN 332
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
++ A +C+ M K W P+ T++ L+ GL ++ +A ++ L+ +R P
Sbjct: 333 FDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVP 383
>gi|5902386|gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
Length = 419
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 177/351 (50%), Gaps = 1/351 (0%)
Query: 38 IKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQL 97
+K + + +LKSE +P ++ ++ + +R AF VS+L+ A + I L
Sbjct: 34 LKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDL 93
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
LE KT P R+ E F V I+LYG+A M A+ TF MD YG ++SV + NA L
Sbjct: 94 LEHQKTLPQGRR-EGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLS 152
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ + + + P YGI+ ++ ++N IKSFCE G Y + EM + + P+
Sbjct: 153 FNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDV 212
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ L++ YK + + +M G + +N+RIQ L +R+ +A LL
Sbjct: 213 VTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLL 272
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M ++P+ TY +I GF + A++++ +M G +P+ + ++LC+ G
Sbjct: 273 MPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGN 332
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
++ A +C+ M K W P+ T++ L+ GL ++ +A ++ L+ +R P
Sbjct: 333 FDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVP 383
>gi|449438040|ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
gi|449494815|ref|XP_004159654.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
mitochondrial-like [Cucumis sativus]
Length = 405
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 188/368 (51%), Gaps = 15/368 (4%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK 102
RA + + S+S+P ++ AS P R + ++ KL++A F+ I +++
Sbjct: 41 RAAKSAILSQSDPDKLAQSFIQASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVIIQSHH 100
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVD----ALNALLLGCIL 158
P +E F + I+LY M++ A+ +D+ L +S + +L A+L +
Sbjct: 101 KSPSA-TSEGFWIRLIMLYSSVGMVNQALYI---LDQAILHKSCNLSEKSLCAILSVFLD 156
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR--PN 216
+ E+V +F P+ G+ P + ++N V+K+F D S + + E+ + + PN
Sbjct: 157 NSMPEKVHEMFRSIPEKIGVTPTAVSHNLVLKAFVRQNDLPSARNWIDELCKDDAKVIPN 216
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
F +LL ++ ++ + + K G+ + YN RI LCK K AK +LD
Sbjct: 217 IDSFTILLGAYWSNGDMIGFDEIEKEISKRGLEFNLATYNYRISRLCKNKECARAKKILD 276
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS-MTNGGCEPDSYCFFMFTYFLCQG 335
M+S+G+KPN +Y +IHG+ G++E A K+ + +G P S ++ + +
Sbjct: 277 EMISKGVKPNSSSYDSIIHGYCDVGDIESAMKILKGILEDGHVSPTSRIYYRLIRSMVKE 336
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG-DMW 394
GE+E AL+ CR ++ + WVP F M++LV GL ++SKV EA E++ MKKR D W
Sbjct: 337 GEFEMALETCRETIKRRWVPPFEAMEALVRGLVAMSKVEEAKEVVEKMKKRLKGPAVDSW 396
Query: 395 ---NAALP 399
AALP
Sbjct: 397 RKIEAALP 404
>gi|449434360|ref|XP_004134964.1| PREDICTED: uncharacterized protein LOC101207147 [Cucumis sativus]
Length = 2802
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 163/303 (53%), Gaps = 1/303 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ V L+ F+ I ++E K D++ E F I LYG+A M HA + F+E
Sbjct: 1313 TYDSTVRLLAVRKKFSLIEDIIEAQKKYEDIKV-EGFATRLIKLYGKAGMFSHARKLFDE 1371
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+ + ++V + N+LL C+ SK ++V++IF E P+ I+ + +YN VI +FCE
Sbjct: 1372 LPELNCERTVKSFNSLLASCVKSKELDQVEKIFREVPQEVSIKADVISYNIVINAFCEMD 1431
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+M + + PN F LL Y++ ++ D +V ME IA + YN
Sbjct: 1432 ALDKAILFFHDMEKNGMEPNLVTFNTLLTALYRKGQFFDGERVWATMENKNIAPDLVSYN 1491
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
R++ + KR ++ LL M + IKP++ +Y LI GF ++G+LE AKK + +
Sbjct: 1492 ARLRGMVLEKRIQDGIELLAKMEEKEIKPDVYSYNILIKGFCQDGDLEEAKKWYYKLKES 1551
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+P + + + LC+ G++++ L++C+ ++ KG+V H + ++ +V GLA +SK EA
Sbjct: 1552 EVDPIATTYRILLPLLCEQGDFDSGLQLCKEAIDKGFVFHTAEVQRVVDGLAEVSKTEEA 1611
Query: 377 NEL 379
+L
Sbjct: 1612 KDL 1614
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 192/380 (50%), Gaps = 25/380 (6%)
Query: 17 NYRNLATSSLLSAGDE----AAALTIKEKKRATIAR--LKSESNPFRILDICCGASLAPE 70
N NL+ SSL + + A LT + + + + R + SES FR
Sbjct: 882 NKPNLSLSSLATKKSKKSPTATPLTDENRLQKLVQRFIINSESKQFR----------RKN 931
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D +AV K F+ I +++E K ++++ E F + I LYG+A M A
Sbjct: 932 DTYDSTVRFLAVRK-----KFSMIEEIIEAQKKYDEIKE-EGFVIRLIRLYGKAGMFSQA 985
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F+E+ + ++V + NALL+ C+ SK +++V++IF E P+ IE + +YN VI
Sbjct: 986 RKLFDELPELKCERTVRSFNALLVSCVKSKEFDQVEKIFREVPQELSIEADVSSYNIVIN 1045
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++CE D M + + P+ F LL Y++ ++ D + ME IA
Sbjct: 1046 AYCEMDDFDKAILFFNHMEKNGMEPDLVTFNTLLTALYRKGQFLDGESMWARMENKNIAP 1105
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN R++ + KR ++ LL M + IKP++ Y LI F K+G+LE AKK +
Sbjct: 1106 DLVSYNARLRGMVLDKRIQDGIELLAKMEEKEIKPDVHIYNTLITSFCKDGDLEEAKKWY 1165
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ +P++ + LC+ G++++ L++C+ ++ K +V H + ++ +V GLA +
Sbjct: 1166 YKLKESEVDPNATTYRTLLPLLCEKGDFDSGLQLCKEAINKRFVFHTAEVQRVVDGLAEV 1225
Query: 371 SKVAEANELIGLMKKRFPKS 390
SK EA + L+KK F S
Sbjct: 1226 SKTEEAKD---LLKKMFSSS 1242
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 158/320 (49%), Gaps = 19/320 (5%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
V L+ F+ I ++E K ++++ E F + I LYG+A M HA + F+E+ +
Sbjct: 1716 TVRLLAIHKKFSMIEDIIEAQKKYEEIKE-EGFAIRLIKLYGKAGMFSHARKLFDELPEL 1774
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKR------------------IFTEFPKVYGIEPNS 182
++V + NALL C SK +E+++ IF E P+ IE +
Sbjct: 1775 NCERTVKSFNALLTSCANSKEFEQLETMFREVPCANSKEFDQLETIFREVPQEVSIEADV 1834
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+YN VI ++C+ G +M + PN F LL Y + ++ D +
Sbjct: 1835 VSYNIVINAYCKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWAR 1894
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
ME IA + YN R+Q + KR ++ LL M + IKPN+D+Y LI GF ++G+
Sbjct: 1895 MENKNIAPDLISYNARLQRMVLEKRIQDGIQLLAEMEEKAIKPNVDSYYILIEGFCEDGD 1954
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
LE AK+ + + + P++ + C+ G++++ L++C+ S G V ++
Sbjct: 1955 LEQAKQWYYKLKDNEVNPNASIYRTLLPLYCEKGDFDSGLRLCKESFDNGLVFLAEEVQR 2014
Query: 363 LVTGLASISKVAEANELIGL 382
+V GL +SK+ EA +L+ L
Sbjct: 2015 VVDGLIEVSKIEEAKDLVAL 2034
>gi|26453140|dbj|BAC43646.1| unknown protein [Arabidopsis thaliana]
gi|28950987|gb|AAO63417.1| At1g80150 [Arabidopsis thaliana]
Length = 397
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 177/351 (50%), Gaps = 1/351 (0%)
Query: 38 IKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQL 97
+K + + +LKSE +P ++ ++ + +R AF VS+L+ A + I L
Sbjct: 34 LKPLEEPALVKLKSERDPEKLYNLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDL 93
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
LE KT P R+ E F V I+LYG+A M A+ TF MD YG ++SV + NA L
Sbjct: 94 LEHQKTLPQGRR-EGFMVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLS 152
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ + + + P YGI+ ++ ++N IKSFCE G Y + EM + + P+
Sbjct: 153 FNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDV 212
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ L++ YK + + ++ G + +N+RIQ L +R+ +A LL
Sbjct: 213 VTYTTLISALYKHERCVIGNGLWNLIVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLL 272
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M ++P+ TY +I GF + A++++ +M G +P+ + ++LC+ G
Sbjct: 273 MPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGN 332
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
++ A +C+ M K W P+ T++ L+ GL ++ +A ++ L+ +R P
Sbjct: 333 FDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIMELVHRRVP 383
>gi|21617993|gb|AAM67043.1| unknown [Arabidopsis thaliana]
Length = 394
Score = 171 bits (432), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 186/380 (48%), Gaps = 7/380 (1%)
Query: 5 YRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCG 64
+ LR NF+ T R ++ AAA T K + I + E +P I +
Sbjct: 7 FLLRGNFSFSTPTNRRFFSAVT------AAAATPSPPKPSLITLVNDERDPKFITEKFKK 60
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A A + + V +L+ A F + ++LEE P++ + E F I LYG+
Sbjct: 61 ACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSK-EGFVARIINLYGRV 119
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
M ++A + F+EM + +++V + NALL C+ SK ++ V+ IF E P IEP+ +
Sbjct: 120 GMFENAQKVFDEMPERNCKRTVLSFNALLNACVNSKKFDLVEGIFEELPGKLSIEPDVAS 179
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +IK C G + +++ E+ K ++P+ F +LL Y + K+E+ ++ M
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ + + YN R+ L +SEE +L D + +KP++ T+ +I GF EG L+
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + + GC P + F +C+ G+ E+A ++C+ AK + + ++ +V
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 365 TGLASISKVAEANELIGLMK 384
L SK EA E++ L K
Sbjct: 360 DALVKGSKQDEAEEIVELAK 379
>gi|18399887|ref|NP_566445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273726|sp|Q9LK57.1|PP226_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g13160, mitochondrial; Flags: Precursor
gi|10172603|dbj|BAB01407.1| unnamed protein product [Arabidopsis thaliana]
gi|22531265|gb|AAM97136.1| expressed protein [Arabidopsis thaliana]
gi|27311983|gb|AAO00957.1| expressed protein [Arabidopsis thaliana]
gi|332641782|gb|AEE75303.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 394
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 185/380 (48%), Gaps = 7/380 (1%)
Query: 5 YRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCG 64
+ LR NF+ T R ++ AAA T K + I + E +P I +
Sbjct: 7 FLLRGNFSFSTHTNRRFFSAVT------AAAATPSPPKPSLITLVNDERDPKFITEKFKK 60
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A A + + V +L+ A F + ++LEE P++ + E F I LYG+
Sbjct: 61 ACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSK-EGFVARIINLYGRV 119
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
M ++A + F+EM + +++ + NALL C+ SK ++ V+ IF E P IEP+ +
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +IK C G + +++ E+ K ++P+ F +LL Y + K+E+ ++ M
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMV 239
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ + + YN R+ L +SEE +L D + +KP++ T+ +I GF EG L+
Sbjct: 240 EKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD 299
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + + GC P + F +C+ G+ E+A ++C+ AK + + ++ +V
Sbjct: 300 EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVV 359
Query: 365 TGLASISKVAEANELIGLMK 384
L SK EA E++ L K
Sbjct: 360 DALVKGSKQDEAEEIVELAK 379
>gi|297834132|ref|XP_002884948.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
gi|297330788|gb|EFH61207.1| hypothetical protein ARALYDRAFT_478692 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 186/380 (48%), Gaps = 7/380 (1%)
Query: 5 YRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCG 64
+ LR N +L T R ++ AAA T + + I + E +P I++
Sbjct: 7 FLLRGNLSLSTPTNRRFFSAVT------AAAATPSSPRPSLITLVNDERDPKFIMEKFKK 60
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A A + + V +L+ A F + ++LEE P++ + E F I LYG+
Sbjct: 61 ACQAEWFRKNIAVYEKTVRRLAAAKKFEWVEEILEEQNKYPNMSK-EGFVARIINLYGRV 119
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
M ++A + F+EM + +++V + NALL C+ SK ++ V+ IF E P IEP+ +
Sbjct: 120 GMFENAQKVFDEMPERNCKRTVLSFNALLNACVNSKKFDLVESIFKELPGKISIEPDVAS 179
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +IK C G + +++ E+ K ++P+ F +LL Y + K+E+ K+ M
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEKIWARMV 239
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ + + YN R+ L K+SEE +L D + +KP++ T+ +I GF EG L+
Sbjct: 240 EKKVKRDIRSYNARLLGLAMEKKSEEMVSLFDELKVNELKPDVFTFTAMIKGFAGEGRLD 299
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + + GC P + F +C+ + E+A ++C+ K + + ++ +V
Sbjct: 300 EAITWYKEIEKNGCRPMKFVFNSLLPAICKACDLESAYELCKEIFVKRLLVDEAVLQEVV 359
Query: 365 TGLASISKVAEANELIGLMK 384
L SK EA E++ L K
Sbjct: 360 DTLVKGSKQDEAEEIVELAK 379
>gi|15231160|ref|NP_187922.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75311241|sp|Q9LK58.1|PP225_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13150
gi|10172602|dbj|BAB01406.1| unnamed protein product [Arabidopsis thaliana]
gi|66792658|gb|AAY56431.1| At3g13150 [Arabidopsis thaliana]
gi|332641781|gb|AEE75302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 551
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 1/303 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+S + +L +A F+ I ++L+ K D++ +E F + ++LYG + M +HA + F+EM
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIK-SEDFVIRIMLLYGYSGMAEHAHKLFDEM 148
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ ++V + NALL + SK +E + F E P+ GI P+ TYN +IK+ C G
Sbjct: 149 PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ SI E+ + P+ F LL FY+ + + ++ +M+ ++ + YN
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
R++ L + K+ +A L+D M + GI P++ TY LI + + NLE K + M G
Sbjct: 269 RVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKG 328
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
PD+ + M LC+ G+ + A++V ++ + + K +V L K+ EA
Sbjct: 329 LTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT 388
Query: 378 ELI 380
+L+
Sbjct: 389 QLV 391
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 80/193 (41%), Gaps = 1/193 (0%)
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVN 253
SG + + + EM + F LL+ + K ++ K ++ EK GI +
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I++LC+ ++ ++ + + G +P+L ++ L+ F + +++ M
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ P+ + L + ++ AL + +G P T +L+T + +
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 374 AEANELIGLMKKR 386
E + MK++
Sbjct: 315 EEVMKCYNEMKEK 327
>gi|224076660|ref|XP_002304977.1| predicted protein [Populus trichocarpa]
gi|222847941|gb|EEE85488.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 163/305 (53%), Gaps = 1/305 (0%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ +L+ A F + ++LE K D+ + E F+ I LYG + M D+A + F+EM +
Sbjct: 66 IRRLAAAKKFRYVEEILENQKQYQDMSK-EGFNARLISLYGSSGMFDNARKVFDEMLERK 124
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
++V + NALL C+ SK ++EV +F + IEP+ +YN V+K+FCE G S
Sbjct: 125 CARTVLSFNALLGACVNSKKFDEVGGLFRGLSEELEIEPDLVSYNTVMKAFCEMGSLDSA 184
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
S+L E+ +K ++P+ F LL G Y +++ ++ Q M++ + YN ++
Sbjct: 185 VSLLDEIEKKGLKPDLITFNTLLNGLYANGRFDAGERIWQRMKEKNVKPDGRSYNEKLLG 244
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
L KR ++A +++ M S GI+ ++ +Y LI GF EG+LE AK + + +PD
Sbjct: 245 LALEKRMKDATKVVEEMKSEGIEFDIFSYNALIRGFVNEGDLEEAKGWYGEIRKSDIKPD 304
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
F F+ + G+ A +C+ +++ + ++ ++ LA SK+ EA EL+
Sbjct: 305 KLTFKTLIPFVVEKGDVAFAFDLCKDALSSKLAVKEALIQPVLDALAKESKINEAKELVE 364
Query: 382 LMKKR 386
L K R
Sbjct: 365 LSKAR 369
>gi|297834130|ref|XP_002884947.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
gi|297330787|gb|EFH61206.1| hypothetical protein ARALYDRAFT_897532 [Arabidopsis lyrata subsp.
lyrata]
Length = 528
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 158/303 (52%), Gaps = 1/303 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+S + +L +A F+ I ++L+ K D++ +E F + ++LYG + M +HA + F+EM
Sbjct: 93 YSAFIRRLREAKKFSTIHEVLQYQKKFDDIK-SEDFVIRIMLLYGYSGMAEHAHKLFDEM 151
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ ++V + NALL + S+ +E K+ F E P+ GI P+ TYN +IK+ C +G
Sbjct: 152 PELNCERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLVTYNTMIKALCRTGS 211
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ SI E+ + P+ F LL FY+ + + ++ +M+ +A + YN
Sbjct: 212 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLAPNIRSYNS 271
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
R++ L + K+ +A L++ M + GI P++ TY I + + NLE K + M G
Sbjct: 272 RVRGLTRNKKFTDAIDLINVMKTEGISPDVHTYNAFITAYRGDNNLEEVMKWYNEMKEKG 331
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
PD+ + + LC+ G+ + A+++ ++ + + K +V L K+ EA
Sbjct: 332 LTPDTVTYCLLIPLLCKKGDLDRAVEISEEAIKHKLLSRPNMYKPVVERLMGAGKIDEAT 391
Query: 378 ELI 380
+L+
Sbjct: 392 QLV 394
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/193 (17%), Positives = 79/193 (40%), Gaps = 1/193 (0%)
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVN 253
SG + + + EM + F LL+ + K ++ K ++ EK GI +
Sbjct: 138 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSRKLDEAKKAFKELPEKLGITPDLV 197
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I++LC+ ++ ++ + + G +P+L ++ L+ F + +++ M
Sbjct: 198 TYNTMIKALCRTGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 257
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ P+ + L + ++ A+ + +G P T + +T + +
Sbjct: 258 KSKNLAPNIRSYNSRVRGLTRNKKFTDAIDLINVMKTEGISPDVHTYNAFITAYRGDNNL 317
Query: 374 AEANELIGLMKKR 386
E + MK++
Sbjct: 318 EEVMKWYNEMKEK 330
>gi|15222796|ref|NP_175985.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174230|sp|Q9LG23.1|PPR82_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g55890, mitochondrial; Flags: Precursor
gi|8778306|gb|AAF79315.1|AC002304_8 F14J16.14 [Arabidopsis thaliana]
gi|18650654|gb|AAL75896.1| At1g55890/F14J16_4 [Arabidopsis thaliana]
gi|53828645|gb|AAU94432.1| At1g55890 [Arabidopsis thaliana]
gi|332195194|gb|AEE33315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 398
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 190/378 (50%), Gaps = 3/378 (0%)
Query: 7 LRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGAS 66
LR FN T R ++++ + + A I +++ + + E NP RI++ A
Sbjct: 8 LRGTFN--TCPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKFKKAC 65
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM 126
+ + + V +L A + + ++LEE K D+ + E F I LYG+A M
Sbjct: 66 ESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSK-EGFAARIISLYGKAGM 124
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++A + FEEM ++SV + NALL LSK ++ V+ +F E P I+P+ +YN
Sbjct: 125 FENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYN 184
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+IK+ CE ++L E+ K ++P+ F LL Y + ++E ++ M +
Sbjct: 185 TLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK 244
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+A + YN R+ L +S+E L + + G+KP++ ++ +I G EG ++ A
Sbjct: 245 NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEA 304
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + + G PD F + +C+ G++E+A+++ + + +K ++ +T++ LV
Sbjct: 305 EAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDE 364
Query: 367 LASISKVAEANELIGLMK 384
L SK EA E++ + K
Sbjct: 365 LVKGSKREEAEEIVKIAK 382
>gi|297836596|ref|XP_002886180.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332020|gb|EFH62439.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 421
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 7/315 (2%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R A + V +L+++ F+ I L+E K P ++ E F I YG+A+M DHAM+ F
Sbjct: 63 RYAMELTVQRLAKSQRFSDIEALIESHKNNPKIK-TETFLSTLIRSYGRASMFDHAMKMF 121
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-GIEPNSETYNKVIKSFC 193
EEMD+ G ++V + NALL C+ S +E V ++F E P+ Y I P+ +Y +IKS+C
Sbjct: 122 EEMDQIGTPRTVVSFNALLAACLHSDLFERVPQLFDEIPQRYNNITPDKVSYGMLIKSYC 181
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG I+ +M K + F +L YK + + M G
Sbjct: 182 DSGSPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDVAESLWTEMVNKGCELDNT 241
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VYN+R+ + K + E + L++ M S G+KP+ +Y +L+ + +G + AKK++
Sbjct: 242 VYNVRLMNAAK-ESPERVEELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMGEAKKVY--- 297
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G +P++ F + LC G Y+ L V + S +P F T K L GL +++
Sbjct: 298 -EGLEQPNAATFRTLIFRLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRM 356
Query: 374 AEANELIGLMKKRFP 388
+A + +KK+FP
Sbjct: 357 EDARGVARTVKKKFP 371
>gi|147819559|emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 142/272 (52%), Gaps = 1/272 (0%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
AV L++A F+ I +LE K ++ E F V I LYG+A M +HA + F+EM K
Sbjct: 176 AVLTLAKAKKFSFIEDILEHQKQYNEI-STEVFAVRLITLYGKAGMFEHAHKLFDEMPKL 234
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
++V + NALL C+ SK ++++ F E P+ GI P+ +YN ++ +FCE G S
Sbjct: 235 NCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLDS 294
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S+L EM + + P+ F LL FY+ D K+ +M+K +A V YN +++
Sbjct: 295 ALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAKLR 354
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+ R EA L+D M + GIKP++ T L+ GF GNLE AK+ + + P
Sbjct: 355 GVISENRMSEAVNLIDEMKTSGIKPDVFTLNSLMKGFCNAGNLEEAKRWHSEIAINELPP 414
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+ FL + ++E A ++C+ K
Sbjct: 415 VRATYMRLIPFLVEKDDFEMATELCKEVFQKA 446
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 11/206 (5%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY-KEHKYEDVGKVLQMM 243
Y K + + ++ S + IL E +++ + F + L Y K +E K+ M
Sbjct: 173 YEKAVLTLAKAKKFSFIEDIL-EHQKQYNEISTEVFAVRLITLYGKAGMFEHAHKLFDEM 231
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-----GIKPNLDTYKHLIHGFG 298
K V +N + + K+ ++ +DG GI P++ +Y L++ F
Sbjct: 232 PKLNCERTVMSFNALLSACVNSKKFDK----IDGFFQELPRNLGIVPDVVSYNILVNAFC 287
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+ G+L+ A + M G EPD F Q G K+ P+
Sbjct: 288 EMGSLDSALSVLDEMEKVGLEPDLITFNTLLNVFYQSGSNADGEKIWDLMKKNNVAPNVR 347
Query: 359 TMKSLVTGLASISKVAEANELIGLMK 384
+ + + G+ S ++++EA LI MK
Sbjct: 348 SYNAKLRGVISENRMSEAVNLIDEMK 373
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 174/355 (49%), Gaps = 6/355 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+S+P +I ASL P +F I + KL A F+ + LL LK+
Sbjct: 21 IASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMRLKSE-QYS 79
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
N I +YG+AN+ D A++TF M ++ + LN LL + +NY ++
Sbjct: 80 INPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNY--IRPA 137
Query: 169 FTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F F YG+ P++++YN ++ +FC +GD S Y++ +M ++ + P+ + +L+ G
Sbjct: 138 FDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQG 197
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++ + +L+ M G Y + SLC+ K+ +EA LL M +G P+
Sbjct: 198 LCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPD 257
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ Y +I GF +EG A K+ M + GC P+ + LC G Y+ A
Sbjct: 258 IVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVE 317
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAALPR 400
++KG+ PHFS +L+ G ++ K+ EA E++ +++ + W A +PR
Sbjct: 318 EMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPR 372
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 1/146 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G + N ++LG + ++ + P G PN +Y ++ C+ G
Sbjct: 253 GCNPDIVHYNTVILGFCREGRXLDACKVLEDMPS-NGCSPNLMSYGTLVSGLCDQGLYDE 311
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ + EM K P+ + F L+ GF K E+ +VL M + G A + I
Sbjct: 312 AKNYVEEMLSKGFSPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIP 371
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPN 286
+C++ + + + D L I PN
Sbjct: 372 RICEVDKLVRMENIFDEXLKLEITPN 397
>gi|297735184|emb|CBI17546.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 157/341 (46%), Gaps = 47/341 (13%)
Query: 49 LKSESNPFRILDICCGASLAPESPL-DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
L+SE +P R L+I S SPL R A + V +L+++ F I L+E K P +
Sbjct: 44 LRSEFDPDRALEIYSSVSKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKI 103
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
Q L ++Y V +
Sbjct: 104 TQEPYL------------------------------------------STLIRSY--VPK 119
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F E P+ YG+ P+ +Y ++KS+CESG S S+L EM K + A F +L
Sbjct: 120 FFEEIPRRYGVLPDKISYGILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDAL 179
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
YK+ + + KV M K G V YN++I E KAL+D M + G+KP+
Sbjct: 180 YKQGQSDRAEKVWHEMAKKGCLD-VGAYNVKIM-FAHGGDPENVKALIDEMSNAGLKPDT 237
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
+Y +L+ + K G ++ AKK++A + GC P++ F Y+LC+ G++ET KV +
Sbjct: 238 ISYNYLMTSYCKSGMVDEAKKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQ 297
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
S + +P F T++ LV GL K EA LI +KK FP
Sbjct: 298 SAFRRKIPDFGTLRHLVEGLVQKKKTKEAKGLIRTVKKNFP 338
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+++ ++ +EM GL+ + N L+ S +E K+++ E + G
Sbjct: 210 IMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEAKKVYAELEET-GC 268
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL---LLAGFYKEHKYED 235
PN+ T+ +I C SGD + Y + ++ + R DFG L+ G ++ K ++
Sbjct: 269 HPNAATFRTLIYYLCRSGDFETGYKVF---KQSAFRRKIPDFGTLRHLVEGLVQKKKTKE 325
Query: 236 VGKVLQMMEKCGIASGVNVY 255
+++ ++K A+ +NV+
Sbjct: 326 AKGLIRTVKKNFPANFLNVW 345
>gi|242062404|ref|XP_002452491.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
gi|241932322|gb|EES05467.1| hypothetical protein SORBIDRAFT_04g026810 [Sorghum bicolor]
Length = 468
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 18/396 (4%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATS-SLLSAGDEAAALTIKEKKRATIARLKSESNPFR-- 57
MA L L + + R L+++ S + G + A + KR +L+ E +P R
Sbjct: 1 MAALATLLRHGRRTHAHGRRLSSALSTTTGGTDPGATPFSDAKR----QLRRERDPDRVV 56
Query: 58 -ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
ILD AS++ S R A S+A +LS + F LL T N H+
Sbjct: 57 SILDAIDTASISAAS--TRHALSLAARRLSLSRRFAEAEALLSSHLTA----SNTETHLA 110
Query: 117 SIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEFP 173
+++ Y AN+ + A+ F L + L NALL + + Y V +F E
Sbjct: 111 AVLCCYAAANLPEKAIDAFRSAAP-SLPAPISPLPFNALLSTFVRCRRYRRVPVLFAELS 169
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K + I P++ +Y ++K++C + D + +L MR + I P A+ + L+ YK
Sbjct: 170 KEFSITPDATSYAILVKAYCMNRDDAKAKQVLDLMREQGISPTASIYTSLIDSMYKRKMT 229
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ + + M + G V YN++ + EE ++ M + G+KPN TY +L
Sbjct: 230 NEAESLWKEMVESGCEPDVVTYNVKALYYMAHGKPEEVIEVMTEMEAAGLKPNTITYNYL 289
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ + K G LE AK L+ S+ GC D+Y + LC G+++ L + + S+ K
Sbjct: 290 MISYCKSGKLEDAKVLYHSLAEKGCSADAYTYKHMLAELCAHGDFDAGLGIFKDSLKKRK 349
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
VP F TMK LV GLA +VA+A E+I +K FP+
Sbjct: 350 VPDFRTMKRLVEGLAKGGRVADAKEVIAEVKNMFPE 385
>gi|449479644|ref|XP_004155662.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 155/310 (50%), Gaps = 20/310 (6%)
Query: 91 FNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
F+ I ++E K ++++ E F + I LYG+A M HA + F+E+ + ++V + N
Sbjct: 89 FSMIEDIIEAQKKYEEIKE-EGFAIRLIKLYGKAGMFSHARKLFDELPELNCERTVKSFN 147
Query: 151 ALLLGCILSKNYEEVKR------------------IFTEFPKVYGIEPNSETYNKVIKSF 192
ALL C SK +E+++ IF E P+ IE + +YN VI ++
Sbjct: 148 ALLTSCANSKEFEQLETMFREIPCANSKEFDQLETIFREVPQEVSIEADVVSYNIVINAY 207
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G +M + PN F LL Y + ++ D + ME IA +
Sbjct: 208 CKMGALDKAILFFNDMEKNGTEPNLVTFNTLLTALYSKGQFLDGESMWARMENKNIAPDL 267
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN R+Q + KR ++ LL M + IKPN+D+Y LI GF ++G+LE AK+ +
Sbjct: 268 ISYNARLQRMVLEKRIQDGIQLLAEM-EKAIKPNVDSYYILIEGFCEDGDLEQAKQWYYK 326
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
+ + P++ + C+ G++++ L++C+ S G V ++ +V GL +SK
Sbjct: 327 LKDNEVNPNASIYRTLLPLYCEKGDFDSGLQLCKESFDNGLVFLAEEVQRVVDGLIEVSK 386
Query: 373 VAEANELIGL 382
+ EA +L+ L
Sbjct: 387 IEEAKDLVAL 396
>gi|357150324|ref|XP_003575420.1| PREDICTED: pentatricopeptide repeat-containing protein At4g36680,
mitochondrial-like [Brachypodium distachyon]
Length = 468
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 176/353 (49%), Gaps = 15/353 (4%)
Query: 44 ATIARLKSESNPFR---ILDICCGASLAPESPLDRMAFSIAVSKLSQANHF-NAISQLLE 99
A RL+ E + R +LD ASL+ S R A S+A +LS+A F +A + L
Sbjct: 40 AAKTRLRREYDADRAVSLLDAIDTASLSAAS--TRHALSLAARRLSRAGRFADAEALLSS 97
Query: 100 ELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDAL--NALLLGC 156
+ P H+ +I+ Y A + + A++ F L + + NALL
Sbjct: 98 HIPASPT-----EPHLSAILCSYASAALPEKALEAFRSAAP-SLPSPISPMPFNALLSAF 151
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+ + + V +FTE K + I P++ +Y ++K+ C + + +LA+MR + I P
Sbjct: 152 VRCRRHRRVPVLFTELSKEFSITPDATSYGILVKAHCMVRHDAKAHEVLAQMREEGISPT 211
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
T F ++ YK+ K E+ + + M + G YN++ + + E+ ++
Sbjct: 212 TTIFTTMIDSMYKQKKIEEAETLWKQMLESGCKPDQATYNVKAMNFGLHGKPEDVLLVMA 271
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M + G+KP+ TY L+ + K G +E AK L+ S+ GC P++ + +L G
Sbjct: 272 EMEAAGVKPDTITYNFLMTSYCKNGKVEDAKGLYHSLGAKGCSPNAATYKHMMAYLFAHG 331
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+++ A+K+ R S++K VP F TMK V GLA KVAEA ++I +KK FP+
Sbjct: 332 DFDAAMKIFRESLSKHKVPDFKTMKGFVEGLAKGGKVAEAKDVISEVKKMFPE 384
>gi|297847954|ref|XP_002891858.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337700|gb|EFH68117.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 395
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 185/366 (50%), Gaps = 6/366 (1%)
Query: 7 LRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGAS 66
LR FN+ T+ R ++++ ++ AA I + + + + E NP RI++ A
Sbjct: 8 LRGTFNISTI--RRFSSAATVTTAVSAA---ISPPQNSLTSIVNGERNPQRIVEKFKKAC 62
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM 126
+ + + V +L A + + ++LEE K D+ + E F I LYG+A M
Sbjct: 63 ESERFRNNIAVYDRTVRRLVAAKRLHFVEEILEEQKKYRDMSK-EGFAARIISLYGKAGM 121
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++A + F+EM ++SV + NALL LSK ++ V+++F E P I+P+ +YN
Sbjct: 122 FENAQKVFDEMPDRNCKRSVLSFNALLSAYGLSKKFDVVEQLFNELPGKLSIKPDIVSYN 181
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+IK+ CE ++L E K ++P+ F LL Y + ++E ++ + +
Sbjct: 182 TLIKALCEKDSLPEAVALLDEFENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKLVEK 241
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YN R+ L +S+E +L + + + GIKP++ ++ +I G +G ++ A
Sbjct: 242 NVPIDIRTYNARLLGLASEVKSKELVSLFEELKASGIKPDVFSFNAMIRGSINQGKMDEA 301
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + + G PD F + +C+ G++E A+++ + + +K ++ +T++ LV
Sbjct: 302 ESWYKEIVKHGYRPDKATFALLLPAMCKAGDFEFAIELFKETFSKRYLVGQTTLQQLVDE 361
Query: 367 LASISK 372
L SK
Sbjct: 362 LVKGSK 367
>gi|156070774|gb|ABU45188.1| unknown [Capsicum frutescens]
Length = 373
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 166/346 (47%), Gaps = 21/346 (6%)
Query: 44 ATIARLKSESNPFRILDICCGASLAPESPLD-RMAFSIAVSKLSQANHFNAISQLLEELK 102
A + +LK+E +P + L I S SPL R A V +L++++ F+ LE K
Sbjct: 16 AAMPKLKAEHDPDKALQIYSSVSDRYISPLSSRYAQEYTVKRLAKSHRFSDSENFLESHK 75
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
+ Q E F I YG A M DHA++ +MD G +S + N LL C+ SK Y
Sbjct: 76 NSSKITQ-EPFLSSIIRSYGVAGMFDHALKICHQMDHLGTPRSAISFNVLLSACVHSKLY 134
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+ V ++F E P +IK C G L EM K + F
Sbjct: 135 DRVAQLFDEMPVSMDF--------YLIK--CPMG--------LKEMDEKDVEITTVAFTT 176
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+L FYK+ K ++ +V M G V YN++I ++ + E KAL++ M G
Sbjct: 177 ILHSFYKKGKSDEAERVWNEMVNKGCGPDVGAYNVKIMNI-QGGDPEGVKALIEEMSDAG 235
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+KP+ +Y +L+ + + + +K++ + GC P++ F ++L + G+YE
Sbjct: 236 LKPDTISYNYLMTCYFRNELMNEVQKVYEDLEANGCNPNAATFRTLIFYLSKKGKYEAGY 295
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
KV + S+ +P F+T++ LV GL SK+ EA + +KK+FP
Sbjct: 296 KVFKESVRVNKIPDFNTLEYLVEGLVKRSKLNEAKRMSKTVKKKFP 341
>gi|242054629|ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
gi|241928435|gb|EES01580.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
Length = 439
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 158/315 (50%), Gaps = 12/315 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNE-RFHVHSIVLYGQANMIDHAMQTFEE 136
+ +AV++L+ +AI+ +++ K P + + F + L G A+M HA F
Sbjct: 76 YEVAVARLASFGRHDAIAAIIDSQK--PFIEASSVGFAARLVRLCGGASMPSHAAAIF-- 131
Query: 137 MDKYGL---RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-IEPNSETYNKVIKSF 192
+GL +SV NALL + + +++ + F + P + I P +YN +I +
Sbjct: 132 ---HGLPPKHKSVMTFNALLAAYVDASDFDALTTTFQQIPASHPTIIPTVYSYNILISAL 188
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + S+ ++A M ++ + P+ F +LL GFY ++D KV +MM++ I
Sbjct: 189 CQKPELSAALDVIALMEKRGVSPDIISFNILLNGFYNNDSFDDAEKVWEMMKERNIEPDE 248
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN +++ L R E+A AL++ M G KP+ +Y LI G+ KEG L AKK++
Sbjct: 249 KSYNAKLRGLVSQGRVEDAVALIERMQKEGPKPDSVSYNELIRGYCKEGRLNEAKKVYDD 308
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
+ C P+ F L + GE + AL C ++ H S ++ +VT L + S+
Sbjct: 309 LIKNECAPNRGTFHTLVPHLVEAGELDRALSCCHEIFSRKCRVHCSLLQGVVTALIAASR 368
Query: 373 VAEANELIGLMKKRF 387
+ EA ++ L +K +
Sbjct: 369 MGEAKRIVHLGRKNY 383
>gi|449456681|ref|XP_004146077.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 527
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 171/357 (47%), Gaps = 40/357 (11%)
Query: 65 ASLAPESPL--DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG 122
+S P P +++ + +SKL +A F+ + ++L++LK +E + I YG
Sbjct: 103 SSSEPPKPFRYSLLSYDLIISKLGRAKMFDEMEEILQQLKQETRFAPHEVIFCNVIAFYG 162
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A++ D A Q FE + + +++V ++N+LL + ++ E++ ++F + YG P++
Sbjct: 163 RAHLPDRAFQVFERIPSFRCKRTVKSVNSLLAALLKNRQLEKMTQVFVDISN-YG-SPDA 220
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N +I + C GD +V+ + EM+++ ++PN FG L+ G K ++ ++ +
Sbjct: 221 CTFNILIHAACLCGDLDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKED 280
Query: 243 MEK------------------CGIA--------------SGVN----VYNIRIQSLCKLK 266
M K CG+ S V VY+ I +L K
Sbjct: 281 MVKVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHG 340
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R EE +L M G KP+ TY +I+G KE +LE A ++ M GC+PD + F
Sbjct: 341 RKEEVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFN 400
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+LC+ G+ + A+ + +G P + + + GL + ++ EA ++ M
Sbjct: 401 TIIGWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEM 457
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 3/254 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H+ L G +D F+EM K G++ +V L+ G L+ +E R+ + K
Sbjct: 227 IHAACLCGD---LDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVK 283
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
VY I+PN+ Y +IK FC G+ + + + EM +++ + + L++ +K + E
Sbjct: 284 VYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKE 343
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+V +L+ M + G YN I CK E A ++D M+ +G KP++ ++ +I
Sbjct: 344 EVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTII 403
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
KEG L+ A L M GC PD + + LC+ + + A + + KG+V
Sbjct: 404 GWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYV 463
Query: 355 PHFSTMKSLVTGLA 368
P ++ LV L
Sbjct: 464 PRNESINKLVDRLC 477
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 161/330 (48%), Gaps = 5/330 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+S+P +I AS P ++ I + KL +A +F+ I LL +LK++ +
Sbjct: 74 IASQSDPLLAKEIFDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDDLLTDLKSK-NYP 132
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
+ I +YG+AN+ D A++ F + K+ S LN +L + +NY +K
Sbjct: 133 VTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQNY--IKPA 190
Query: 169 FTEF--PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F F Y + PN+++YN +I++FC +G S YS+ +M ++ + P+ + +L+
Sbjct: 191 FDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQA 250
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++ + +L+ M G Y + SLC+ K+ EA LL M +G P+
Sbjct: 251 LCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 310
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ Y +I GF +EG A K+ M + GC P+ + LC G ++ A
Sbjct: 311 IIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLE 370
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
M KG+ PHF+ +L+ G ++ K+ EA
Sbjct: 371 EMMMKGFSPHFAVSNALIKGFCNVGKIEEA 400
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ +Y ++ S C Y +L M+ K P+ + ++ GF +E + D
Sbjct: 271 GYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDA 330
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KVL+ ME G + Y + LC +EAK+ L+ M+ +G P+ LI G
Sbjct: 331 CKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKG 390
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
F G +E A + + G P + + M +C+
Sbjct: 391 FCNVGKIEEACGVVEELLKHGEAPHTETWVMMVSRICE 428
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 19/234 (8%)
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
LL + SKNY +F+ +YG + +K +K F Y+IL +
Sbjct: 122 LLTDLKSKNYPVTPTLFSYIINIYG---EANLPDKALKIF---------YTIL----KFD 165
Query: 213 IRPNATDFGLLLAGFYKEHKY-EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
P+ +L Y + + + + YNI I++ C + A
Sbjct: 166 CNPSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMA 225
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+L + M R + P++++Y+ L+ ++ + GA L M N G PD+ +
Sbjct: 226 YSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNS 285
Query: 332 LCQGGEYETALK-VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
LC+ + A K +CR + KG P +++ G + +A +++ M+
Sbjct: 286 LCRKKKLREAYKLLCRMKV-KGCNPDIIHYNTVILGFCREGRAMDACKVLEDME 338
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 42/100 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN +Y ++ C+ G S L EM K P+ L+ GF K E+
Sbjct: 341 GCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEA 400
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
V++ + K G A + + + +C++ + +LD
Sbjct: 401 CGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILD 440
>gi|297743432|emb|CBI36299.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 140/270 (51%), Gaps = 1/270 (0%)
Query: 39 KEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLL 98
K + + +LK+E +P R+ + + +R AF VS+L+ A F+ I LL
Sbjct: 39 KPLEEPALVKLKAERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLL 98
Query: 99 EELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL 158
E KT P R+ E F V I+LYG+A MI A+ TF +M +G +++V + NA L
Sbjct: 99 EHQKTLPQGRR-EGFIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQ 157
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
S + E + + P +GIE + + N VIK+ C+ Y ++ EM + + P+
Sbjct: 158 SYDLEAIDLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVV 217
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ L++ FYK +++E + +M G + +N+RIQ L +R+ +A +L+ M
Sbjct: 218 TYTTLISAFYKSNRWEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMM 277
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
GI P+ TY +I GF + G LE AKK
Sbjct: 278 EYLGITPDEVTYNLVIKGFCQAGYLEMAKK 307
>gi|414590555|tpg|DAA41126.1| TPA: hypothetical protein ZEAMMB73_459455 [Zea mays]
Length = 246
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 116/225 (51%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F E P+ Y +E N + N V+K FC+ GD + Y ++ M R +RP+ + L+A F
Sbjct: 5 LFEEGPEKYDVEVNDISCNTVVKMFCDMGDLRAAYRVMQGMERAGVRPDVITYTTLMAAF 64
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
YK + E + +M G + YN+RIQ L R +A + M GIKP+
Sbjct: 65 YKCGRREVGDGLWNLMRLRGCVPTLATYNVRIQFLVNRGRGWQANEMARKMYVAGIKPDE 124
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY +I GF G E AK +F +M GC+P++ + +++C+ +++ A ++C+
Sbjct: 125 ITYNLIIKGFFMMGEHEMAKTVFGAMHGRGCKPNNKVYQTMVHYICERRDFDLAFRLCKD 184
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGD 392
M K W P T+ L+ GL +ISK E++ L+ R P D
Sbjct: 185 IMEKNWFPSVDTINQLLKGLMAISKDRNGKEIMKLVTGRKPSYSD 229
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+S+P +I AS P R + I + KL + +FN I +L + ++
Sbjct: 58 IASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPL 117
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
E F + I +Y +A + + + TF +M ++ LN +L + + Y +++
Sbjct: 118 TGEIF-TYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY--LQKA 174
Query: 169 FTEF--PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F F +++G+ PN+ +YN ++++FC + D S Y + +M + + P+ + +L+ G
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
F ++ + ++L M G Y + SLC+ + EA LL M +G P+
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
L Y +I GF +E A+K+ M + GC P+S + LC G ++ K
Sbjct: 295 LVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLE 354
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAALP 399
++KG+ PHFS LV G S KV EA +++ +MK D W +P
Sbjct: 355 EMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ +Y ++ S C Y +L M+ K P+ + ++ GF +E + D
Sbjct: 255 GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KVL M G + Y I LC +E K L+ M+S+G P+ L+ G
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
F G +E A + + G S + M +C E E
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 417
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PNS +Y +I C+ G L EM K P+ + L+ GF K E+
Sbjct: 325 GCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 384
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
V++++ K G + + + I +C SE+ K L+ + I
Sbjct: 385 CDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEI 431
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 170/355 (47%), Gaps = 5/355 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+S+P +I ASL P + + I + K ++ HF+ + LL LK+
Sbjct: 49 IASQSDPLLAKEIFDYASLQPNFRHNYSTYLILILKFGRSKHFSLLDDLLRRLKSESSQP 108
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
+ I +YG+AN+ D A+ TF M ++ ++ LN +L + +NY ++
Sbjct: 109 ITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSHRNY--LRPA 166
Query: 169 FTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F F + G+ P++++YN ++++FC +GD S Y++ +M ++ + P+ + +L+
Sbjct: 167 FDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQA 226
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++ + + + M G Y + SLC+ K+ EA LL M +G P+
Sbjct: 227 LCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPD 286
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ Y +I GF +EG A K+ M GC P+ + LC G + A K
Sbjct: 287 IVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVE 346
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEA-NELIGLMKKRFPKSGDMWNAALPR 400
++KG+ PHF+ + +LV G ++ ++ EA L ++ R D W +P+
Sbjct: 347 EMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPHKDTWMIIVPQ 401
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 161/353 (45%), Gaps = 3/353 (0%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+++ ++I AS P + + KL +A F + L+++++ +
Sbjct: 107 IASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMR-KDGCP 165
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
V I +YG+ M + A++ F +M ++G N LL+ I K E +
Sbjct: 166 YTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSL 225
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
F + + +GI PN+ TYN +I++ C S S Y + +M ++ P+ + +L+ G
Sbjct: 226 FKKLHE-FGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLC 284
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
++ + + VL M G YN + SLC+ EA LL M G P++
Sbjct: 285 RKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVI 344
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
Y +I GF +EG A ++ M GC P++ + LC G+++ A
Sbjct: 345 NYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEM 404
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAALPR 400
++ G++PH S L+TGL + KV EA E++ +M K+ W+ L R
Sbjct: 405 ISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMR 457
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+S+P +I AS P R + I + KL + +FN I +L + ++
Sbjct: 58 IASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPL 117
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
E F + I +Y +A + + + TF +M ++ LN +L + + Y +++
Sbjct: 118 TGEIF-TYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGY--LQKA 174
Query: 169 FTEF--PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F F +++G+ PN+ +YN ++++FC + D S Y + +M + + P+ + +L+ G
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
F ++ + ++L M G Y + SLC+ + EA LL M +G P+
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
L Y +I GF +E A+K+ M + GC P+S + LC G ++ K
Sbjct: 295 LVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLE 354
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAALP 399
++KG+ PHFS LV G S KV EA +++ +MK D W +P
Sbjct: 355 EMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 408
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ +Y ++ S C Y +L M+ K P+ + ++ GF +E + D
Sbjct: 255 GFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KVL M G + Y I LC +E K L+ M+S+G P+ L+ G
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
F G +E A + + G S + M +C E E
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 417
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N ++LG + +++ + G PNS +Y +I C+ G L EM
Sbjct: 299 NTMILGFCREDRAMDARKVLDDMLS-NGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMI 357
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K P+ + L+ GF K E+ V++++ K G + + + I +C SE
Sbjct: 358 SKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESE 417
Query: 270 EAKALLDGMLSRGI 283
+ K L+ + I
Sbjct: 418 KIKLFLEDAVKEEI 431
>gi|413952228|gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays]
Length = 453
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 156/317 (49%), Gaps = 7/317 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNE-RFHVHSIVLYGQANMIDHAMQTFEE 136
+ +AV++L+ + I+ +++ K P + + F I L G+A+M HA F +
Sbjct: 90 YDVAVARLASFGRHDGIAAIIDSQK--PFIAASSVGFAARLIRLCGRASMPSHAAAIFHD 147
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-GIEPNSETYNKVIKSFCES 195
+ +S NALL + + +++ + E P + I P ++N +I + C+
Sbjct: 148 LPPK--HKSSMTFNALLAAYLDASDFDALATALQEIPATHPTIAPTIYSHNILISALCKK 205
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
D S+ ++ M ++ I P+ F +LL GFY +++DV KV +MM++ + Y
Sbjct: 206 PDLSAAVDVITLMEKRGITPDIISFNILLNGFYSNDRFDDVEKVWEMMKERNVEPDARSY 265
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N +++ L R E+A AL++ M G KP+ +Y LI G+ EG L AKK++ +M
Sbjct: 266 NAKLRGLVSQGRVEDAAALIERMQKEGPKPDSVSYNELIRGYCNEGRLNEAKKVYDNMIK 325
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P+ F + GE + AL C + S ++ +VT L + S+V E
Sbjct: 326 NGYAPNRGTFHTLVPHFVEAGELDHALSCCHEIFTRKCRVQCSLLQGVVTALFAASRVEE 385
Query: 376 ANELIGLMKKR-FPKSG 391
A ++ L ++ +P+ G
Sbjct: 386 AKRIVHLGRENYYPRKG 402
>gi|357138274|ref|XP_003570721.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
mitochondrial-like [Brachypodium distachyon]
Length = 423
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 151/322 (46%), Gaps = 14/322 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEE-LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
DR FS+AV++L+ A + + +L L P +E F + I LY A M H++
Sbjct: 79 DRPIFSLAVTRLASAGRRDLVFSILSSSLTALPAPHPSEGFLIRLISLYAAAGMPQHSLS 138
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
TF + R +ALL + ++ F + P +P ++N ++KS
Sbjct: 139 TFRLVKPATDR----VFSALLAAYHDTAQHDLAVTAFRDLPAELSFQPGVVSHNVLLKSM 194
Query: 193 CESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMME--KCGIA 249
+GD + + EM K+ ++P+ +L G+ K Y ++ + + K +
Sbjct: 195 VATGDVAGARQVFDEMADKAGVQPDIVSCNEVLRGYLKTADYAAFDQLFKEIAGGKRRLK 254
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN+R+ +LC RS EA+ LLD M + G+ PN +++ +I G KEG + A L
Sbjct: 255 PNVTTYNLRMAALCAKGRSFEAEELLDVMGANGVPPNRESFNTVIGGLCKEGEVGAAAAL 314
Query: 310 FASM-----TNG-GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
F M NG G P+ + M L + + AL+VC+ +A W P F +K L
Sbjct: 315 FKRMPEVPRPNGKGVSPNFETYIMLLEALVEKRVFSPALEVCKECLANKWAPPFQAVKGL 374
Query: 364 VTGLASISKVAEANELIGLMKK 385
+ GL KV +A EL M+K
Sbjct: 375 IQGLVKSRKVKQAKELGMAMRK 396
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 156/312 (50%), Gaps = 8/312 (2%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
++ +F+ I LL K+R F + I +YG+A++ D A++ F M +G S
Sbjct: 118 RSKYFSLIDDLLLSFKSRRYPVTPTAFS-YIIKIYGEADLPDKALKVFYTMIDFGCTPSS 176
Query: 147 DALNALLLGCILSKNYEEVKRIFTEF--PKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
LN +L + +N+ ++ F F + +G+ PN+++YN +I++FC +G+ S Y++
Sbjct: 177 KQLNRILEILVSHRNF--IRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTL 234
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+M +++ P+ + L+ G ++++ +L+ M G Y + SLC+
Sbjct: 235 FNKMFERNVIPDVETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCR 294
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
K+ EA LL M +G P++ Y +I GF +EG A K+ M + GC P+
Sbjct: 295 KKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVS 354
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ T LC G +E A KG+ PHFS + +LV G SI ++ E+ ++ M
Sbjct: 355 YESLTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDML 414
Query: 385 KR--FPKSGDMW 394
KR P S D W
Sbjct: 415 KRGKAPHS-DTW 425
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 3/169 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ +Y ++ S C Y +L M+ K P+ + ++ GF +E + D
Sbjct: 277 GYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDA 336
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+L+ M+ G + Y LC E AK ++ M +G P+ L+ G
Sbjct: 337 CKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKG 396
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
F G + + + M G P S + + +C E E K C
Sbjct: 397 FHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGIC---EVEDTAKFC 442
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 1/175 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ N ++ A+ E+M G + LL K E ++ KV G P+
Sbjct: 259 RKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRM-KVKGCNPDI 317
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN VI FC G + IL +M+ PN + L G + +E ++
Sbjct: 318 AHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVEE 377
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
M G +V + ++ + R E+ ++L+ ML RG P+ DT++ +I G
Sbjct: 378 MTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPHSDTWEIIISGI 432
>gi|125524099|gb|EAY72213.1| hypothetical protein OsI_00065 [Oryza sativa Indica Group]
Length = 423
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 156/327 (47%), Gaps = 21/327 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
DR F+++V +L+ A + ++ +L T P +E F + I LY A M DH++
Sbjct: 77 DRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSLS 136
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
TF + R AL+ALL ++ Y+ + F P GI+P+ ++N ++KSF
Sbjct: 137 TFRIVTPPSDR----ALSALLSAYHDNRLYDRAIQAFRTLPAELGIKPSVVSHNVLLKSF 192
Query: 193 CESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
SGD +S ++ EM K+ + P+ +L G+ Y + L+ + A G
Sbjct: 193 VASGDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAAFDQFLK--DNTTAAGG 250
Query: 252 -------VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
V+ YN+R+ SLC RS EA LLD M ++G+ PN ++ +I G KEG +
Sbjct: 251 KRRLKPNVSTYNLRMASLCSKGRSFEAAELLDAMEAKGVPPNRGSFNTVIQGLCKEGEVG 310
Query: 305 GAKKLFASM-----TNG-GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
A +F M NG G P+S + M L G + AL+V + + W P F
Sbjct: 311 AAVAIFKRMPEVPRPNGKGVLPNSETYIMLLEGLVNKGVFAPALEVFKECLQNKWAPPFQ 370
Query: 359 TMKSLVTGLASISKVAEANELIGLMKK 385
++ L+ GL K A E+ M+K
Sbjct: 371 AVQGLIKGLLKSRKAKHAKEVAMAMRK 397
>gi|115450015|ref|NP_001048609.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|48716331|dbj|BAD22943.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113538140|dbj|BAF10523.1| Os02g0829800 [Oryza sativa Japonica Group]
gi|125584252|gb|EAZ25183.1| hypothetical protein OsJ_08983 [Oryza sativa Japonica Group]
gi|215769058|dbj|BAH01287.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 423
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 156/327 (47%), Gaps = 21/327 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
DR F+++V +L+ A + ++ +L T P +E F + I LY A M DH++
Sbjct: 77 DRPIFTLSVHRLASAGRRDLVASILSSSLTSLPAPHPSEGFLIRLISLYSAAGMPDHSLS 136
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
TF + R AL+ALL ++ Y+ + F P GI+P+ ++N ++KSF
Sbjct: 137 TFRIVTPPSDR----ALSALLSAYHDNRLYDRAIQAFRTLPAELGIKPSVVSHNVLLKSF 192
Query: 193 CESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
SGD +S ++ EM K+ + P+ +L G+ Y + L+ + A G
Sbjct: 193 VASGDLASARALFDEMPSKADVEPDIVSCNEILKGYLNAADYAAFDQFLK--DNTTAAGG 250
Query: 252 -------VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
V+ YN+R+ SLC RS EA LLD M ++G+ PN ++ +I G KEG +
Sbjct: 251 KRRLKPNVSTYNLRMASLCSKGRSFEAAELLDAMEAKGVPPNRGSFNTVIQGLCKEGEVG 310
Query: 305 GAKKLFASM-----TNG-GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
A +F M NG G P+S + M L G + AL+V + + W P F
Sbjct: 311 AAVAIFKRMPEVPRPNGKGVLPNSETYIMLLEGLVNKGVFAPALEVFKECLQNKWAPPFQ 370
Query: 359 TMKSLVTGLASISKVAEANELIGLMKK 385
++ L+ GL K A E+ M+K
Sbjct: 371 AVQGLIKGLLKSRKAKHAKEVAMAMRK 397
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 149/341 (43%), Gaps = 6/341 (1%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
+ R+ + ILD+ P D ++ + L + ++L ++ R
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDP----DIFTYNSLIFGLCKLGEVEEAVEILNQMILR- 380
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
D N + I + N ++ A + + G+ V N+L+ G L+ N+
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+F E K G P+ TYN +I S C G S+L EM N + L+
Sbjct: 441 MELFEEM-KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLID 499
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
GF K + E+ ++ ME GI+ V YN I LCK +R EEA L+D ML G+KP
Sbjct: 500 GFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKP 559
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ TY L+ F + G+++ A + +MT+ GCEPDS + L + G E A ++
Sbjct: 560 DKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLL 619
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
R KG V T ++ L + +EA L M ++
Sbjct: 620 RTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEK 660
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 159/333 (47%), Gaps = 5/333 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK-TRPDL 107
L+ +S+ ILD+ AS P + + + KL + F ++ ++L+E+K T ++
Sbjct: 79 LRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEI 138
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVK 166
R+ + I Y + + D A+ + M++ +GL+ N LL ++ N ++
Sbjct: 139 RRGTFLIL--IESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYN-FLLNVLVDGNKLKLV 195
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
I GI+P+ T+N +IK+ C + ++ EM + P+ F L+ G
Sbjct: 196 EIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQG 255
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
F +E ++ + M G S N+ + CK R EE + +D M + G +P+
Sbjct: 256 FIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPD 315
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
T+ L++G + G+++ A ++ M G +PD + + + LC+ GE E A+++
Sbjct: 316 RFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILN 375
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + + P+ T +L++ L ++V EA EL
Sbjct: 376 QMILRDFSPNTVTYNTLISTLCKENQVEEATEL 408
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 2/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D F+I + L +A+ ++EE+ + L +E+ + + + ++ A++
Sbjct: 210 DVTTFNILIKALCRAHQIRPAILMMEEMGSY-GLSPDEKTFTTLMQGFIEEGNMNGALRI 268
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M G S +N L+ G EEV E G P+ T+N ++ C
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSN-EGFRPDRFTFNSLVNGLC 327
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G IL M ++ P+ + L+ G K + E+ ++L M +
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTV 387
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I +LCK + EEA L + S+GI P++ T+ LI G N A +LF M
Sbjct: 388 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM 447
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC PD + + M LC G E AL + + + G + T +L+ G ++
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRI 507
Query: 374 AEANELIGLMK 384
EA E+ M+
Sbjct: 508 EEAEEIFDEME 518
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 8/271 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A + F+EM+ G+ ++V N L+ G ++ EE ++ + + G++P+ TYN
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM-LMEGLKPDKFTYN 565
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC +GD I+ M P++ +G L+ G K + E ++L+ ++
Sbjct: 566 SLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLK 625
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG- 305
G+ YN I++L + KR+ EA L M+ +G P+ TYK + G G G
Sbjct: 626 GMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGE 685
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK-SLV 364
A MT+ G PD F M LC +T +K+ M + +FS + S++
Sbjct: 686 AVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQA---NFSDSEVSMI 742
Query: 365 TGLASISKVAEANELIG-LMKKRFPKSGDMW 394
G I K +A +G ++ R PK W
Sbjct: 743 MGFLKIRKFQDALATLGRILSSREPKKA-FW 772
>gi|242054627|ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
gi|241928434|gb|EES01579.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
Length = 429
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 163/343 (47%), Gaps = 25/343 (7%)
Query: 49 LKSESNPFRILDICCGASLA-PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+ E +P +++ AS A P +R + +AVS+L+ +A++ LL+ K P L
Sbjct: 68 ISEERDPDKLVSQFIAASTASPRFRDNRRVYEVAVSRLASFGRRDAVAALLDSQK--PFL 125
Query: 108 R-QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
NE F V + LYG+A+M HA TF + +SV A NALL + + +++ +
Sbjct: 126 EASNEDFTVRILRLYGRASMPSHAAATFVGLPPK--HKSVAAFNALLAAYVDTGDFDSLA 183
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
E P EP S+ +++ M + + P+ F LL G
Sbjct: 184 IALDEIPGSQKAEP------------------SAALDVISLMDKCGLTPDMVSFNSLLNG 225
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
FY +++ K+ +MM++ + YN +++ L R E+A A++ ML G KP+
Sbjct: 226 FYNNGRFDKAEKIWEMMKERNLQPNAKTYNAKLRGLVAEGRMEDAAAVIQRMLKEGPKPD 285
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+Y LI G+ KEG L+ +KK++ + G P+ F L + GE + AL C+
Sbjct: 286 SVSYNELIRGYCKEGRLDESKKVYDELVKNGYAPNKGTFETLIPCLVEVGELDLALNCCQ 345
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL-MKKRFP 388
+ S ++++VT L + S+V EA ++ L K +P
Sbjct: 346 EIFNRKCRVKCSLLQAVVTALVAASRVEEARRIVKLGWKNNYP 388
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 148/329 (44%), Gaps = 14/329 (4%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG- 122
+A +P D + + V +L + + +EE+ TR PD +++ VL G
Sbjct: 1 MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDA------FIYNFVLSGL 54
Query: 123 -QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
Q ++ A FE+M K + +V N L+ G + E +F E G P
Sbjct: 55 CQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAG-KGYVPT 113
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+YN +I FC+ D + + +M R + PN + L+ G K K + +VL
Sbjct: 114 EVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 173
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M K G+ V Y+ I CK++R +EA LL+ M+++GI P + TY L++ +
Sbjct: 174 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 233
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
LE A KLF M C P + LC + + A ++ +AKG P T
Sbjct: 234 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 293
Query: 362 SLVTGLASISKVAEANELIGLMK--KRFP 388
+L GL KV EA EL+ MK KR P
Sbjct: 294 TLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 148/329 (44%), Gaps = 14/329 (4%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG- 122
+A +P D + + V +L + + +EE+ TR PD +++ VL G
Sbjct: 106 MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDA------FIYNFVLSGL 159
Query: 123 -QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
Q ++ A FE+M K + +V N L+ G + E +F E G P
Sbjct: 160 CQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAG-KGYVPT 218
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+YN +I FC+ D + + +M R + PN + L+ G K K + +VL
Sbjct: 219 EVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 278
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M K G+ V Y+ I CK++R +EA LL+ M+++GI P + TY L++ +
Sbjct: 279 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 338
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
LE A KLF M C P + LC + + A ++ +AKG P T
Sbjct: 339 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 398
Query: 362 SLVTGLASISKVAEANELIGLMK--KRFP 388
+L GL KV EA EL+ MK KR P
Sbjct: 399 TLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 9/269 (3%)
Query: 121 YGQANMIDHAMQTFEEMDK--YGLRQSVDALNALLLGCILS-KNYEEVKRIFTEFPKVYG 177
+ +A ++ + ++ M + Y LR S +L+ C+ N++E ++ ++
Sbjct: 20 FAKAGRLEQVKEVYQGMVEAGYTLRASG---YGILISCLCKVGNFDEAYKLLHTM-RLKR 75
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ + Y+ +I C+ ++ +M R + P+A +G ++ K + +D
Sbjct: 76 FKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDAL 134
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ M GI +YN + LC+ ++ EEA+ L + M+ + I PN+ TY LI+G
Sbjct: 135 ATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGL 194
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K +E A +LF M G P + C+ + A V + VP+
Sbjct: 195 CKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNV 254
Query: 358 STMKSLVTGLASISKVAEANELI-GLMKK 385
T +L+ GL+ KV A E++ G++KK
Sbjct: 255 VTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 34/238 (14%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P + T+N V F ++G V + M A+ +G+L++ K +++ K+
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG---------------------- 277
L M Y+ I LCKL R EEA+ L++
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKT 127
Query: 278 ------------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
M +RGIKP+ Y ++ G +E +E A+ LF M P+ +
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC+ ETA ++ + KG+VP + +L+ G + A ++ M
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 73/179 (40%), Gaps = 1/179 (0%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + + P A F + GF K + E V +V Q M + G + Y I I LCK+
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA LL M + K Y +I+ K +E A++L M PD+ +
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGP 119
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + AL +G P +++GL KV EA L M K+
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQ 178
>gi|212275364|ref|NP_001130677.1| uncharacterized protein LOC100191780 [Zea mays]
gi|194707568|gb|ACF87868.1| unknown [Zea mays]
gi|195624402|gb|ACG34031.1| membrane-associated salt-inducible protein like [Zea mays]
gi|195653371|gb|ACG46153.1| membrane-associated salt-inducible protein like [Zea mays]
gi|413937895|gb|AFW72446.1| putative membrane-associated salt-inducible protein [Zea mays]
Length = 471
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 1/270 (0%)
Query: 121 YGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
Y AN+ + A+ F S NALL I + Y V +F E K + I
Sbjct: 119 YASANLPEKAIDAFRSAAPSLPTPNSPLPFNALLSTFIRCRRYRRVPVLFAELSKEFSIT 178
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ +Y ++K++C + D + L MR + I P + L+ YK + +
Sbjct: 179 PNATSYGILVKAYCMARDDAKAKQALDLMREQGISPTNRIYTTLIDSMYKRKMTNEAESL 238
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + V YN++ + EE ++ M + G+KP+ TY L+ + K
Sbjct: 239 WKEMVESECEPDVATYNVKAMYYALHGKPEEVMEVMTEMEAAGVKPDTTTYNFLMTSYCK 298
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G LE AK L+ S+ GC D+ + LC G+++ L + + S+ + VP F T
Sbjct: 299 SGKLEDAKVLYHSLAEKGCSADAATYKHMLAELCAYGDFDAGLGIFKDSLKRRKVPDFRT 358
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPK 389
MK LV GLA +VA+A E++ +KK FP+
Sbjct: 359 MKGLVEGLAKGGRVADAKEVVAEVKKMFPE 388
>gi|226501132|ref|NP_001144243.1| hypothetical protein [Zea mays]
gi|195638968|gb|ACG38952.1| hypothetical protein [Zea mays]
gi|413939592|gb|AFW74143.1| hypothetical protein ZEAMMB73_602318 [Zea mays]
Length = 419
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 151/322 (46%), Gaps = 14/322 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEE-LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
DR F+++V +L+ A + ++ +L L P +E F + I LY A M DH++
Sbjct: 76 DRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPDHSLA 135
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F + R AL+ALL ++ Y+ R F P GI+P ++N ++K+
Sbjct: 136 VFRLVKPASDR----ALSALLSAYHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVLLKAL 191
Query: 193 CESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--EKCGIA 249
SGD ++ +++ EM + ++P+ +L G+ + ++++ + K +
Sbjct: 192 VASGDVAAAHTLFDEMPDTAGVQPDIVSCNEILKGYLNAGDADAFDRLVKEIAGPKRRLK 251
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN+R+ LC RS EA+ LLD M + G+ PN ++ +I G EG + A L
Sbjct: 252 PNVGTYNLRMALLCSKMRSFEAEELLDVMGANGVPPNRTSFNTVIKGLCNEGEVGAAMAL 311
Query: 310 FASMT------NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
F M G P+ + M L + ++ AL++C+ + W P F +K L
Sbjct: 312 FKRMPEVPRQHGKGVSPNFETYIMLLEALVKKNLFDPALEICKECLRNKWAPPFQAVKGL 371
Query: 364 VTGLASISKVAEANELIGLMKK 385
V GL K A E+ M+K
Sbjct: 372 VQGLLKSRKAKHAREVFMAMRK 393
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 131/273 (47%), Gaps = 6/273 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF---PKVYGI--EPN 181
I A F M K G + L+ G + N ++ E +YGI +P
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+Y+ +I + C+ + EM+ + + P + L+ GF K+E+ ++
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ V +N+ I LCK + EAK LL+ M+ RGI PNL TY LI GF G
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 361
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+L A++LF SM + GCEPD C+ + C+ + E A+K+ + G P T
Sbjct: 362 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 421
Query: 362 SLVTGLASISKVAEANELIGLMKKRFPKSGDMW 394
+L+TGL KV +A +L G+M K + GD++
Sbjct: 422 ALLTGLFQGGKVGDAKKLFGVM-KVYGIPGDLY 453
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 111/252 (44%), Gaps = 1/252 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A FEEM G+ +V + +L+ G +EE KR+F E G++PN T+N
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN-QGVQPNVVTFNV 317
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G +L M ++ I PN + L+ GF ++ M G
Sbjct: 318 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 377
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V Y + I CK + EEA L +GML G +P++ TY L+ G + G + AK
Sbjct: 378 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 437
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KLF M G D Y + +F LC+ G A+++ + L+ GL
Sbjct: 438 KLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 497
Query: 368 ASISKVAEANEL 379
K+ A EL
Sbjct: 498 CKAGKLETAWEL 509
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 120/274 (43%), Gaps = 20/274 (7%)
Query: 127 IDHAMQTF---EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE---- 179
I H Q F +M G+ LN +LL C+ + V R+ + GI
Sbjct: 109 IKHYSQVFYLYNQMRLSGISPDCCTLN-ILLNCLCN-----VNRVGEGLAVMAGILRRGY 162
Query: 180 -PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ TY +IK C S + M++ PNA +G L+ G + K
Sbjct: 163 IPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALK 222
Query: 239 VLQMMEKCGIASGVNV------YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ Q M G+N Y+I I +LCK +R +EA+ L + M +G+ P + +Y
Sbjct: 223 LHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTS 282
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LIHGF G E AK+LF M N G +P+ F + LC+ G+ A + + +G
Sbjct: 283 LIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG 342
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
VP+ T SL+ G + + A EL M +
Sbjct: 343 IVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSK 376
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 2/274 (0%)
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
F+V VL + +I+ A E M + G+ ++ N+L+ G L + + +F
Sbjct: 315 FNVLIDVLCKEGKVIE-AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 373
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
P G EP+ Y +I +C++ + M + RP+ +G LL G ++ K
Sbjct: 374 PS-KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
D K+ +M+ GI + +Y I + LCK EA L + + S IK +++ +
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI G K G LE A +LF + +PD + + + C+GG+ A + + G
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T +L+ G K+ + EL+ +M +R
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 2/154 (1%)
Query: 193 CESGD--SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G+ ++ + M + P + F LL+G K Y V + M GI+
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
NI + LC + R E A++ G+L RG P++ TY LI G E + A LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
M GC P++ + LC+ G ALK+
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
++ RPD++ + +L G Q + A + F M YG+ + L G
Sbjct: 410 QVGKRPDVK------TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLC 463
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ E +F + K Y I+ + E +N +I C++G + + + ++ ++ ++P+
Sbjct: 464 KNGCLFEAMELFNKL-KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDV 522
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ +++ F + + + Q MEK G Y I+ + K+ E+ LL
Sbjct: 523 VTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHM 582
Query: 278 MLSRGIKPNLDTYKH 292
M+ R + +++ +H
Sbjct: 583 MVQRDVSLDVNILRH 597
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 44/108 (40%)
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M+ P L ++ HL+ G K + L+ M G PD + LC
Sbjct: 87 MMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNR 146
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L V + +G++P T +L+ GL ++++A L M+K
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQK 194
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 146/320 (45%), Gaps = 9/320 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++I +S A +A +LLEE+K+ + H I A +D AM
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKS-AGFAPDAFTHTPIITAMANAGDLDGAMDH 169
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M G +V AL+ +K EE ++ E + G PN TYN ++ + C
Sbjct: 170 LRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEM-RERGCPPNLVTYNVLVDALC 225
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + ++ +M PN F L+ GF K +D K+L +M G+ V
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I LCK ++ EAK +L+ M +RG+ P+ TY LIHG K +E A+++ M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC PD + + C+ G+ A K + + P T +++ GL + K+
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405
Query: 374 AEANELIGLMKKRFPKSGDM 393
AEA ++ M+ +SGD+
Sbjct: 406 AEAQVILEQMQ----ESGDV 421
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 2/257 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + EEM G+ +AL+ G + EE +++ G P+ Y+ +
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG-SGCTPDVVVYSSI 360
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG- 247
I +FC+SG L EMR++ P+ + ++ G K K + +L+ M++ G
Sbjct: 361 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD 420
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V Y+ I LCK EA+ LLD M G P++ TY +I G K G LE A+
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M GC P+ + LC+ + + A +V G P+ T ++V GL
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540
Query: 368 ASISKVAEANELIGLMK 384
++ EA +L+ MK
Sbjct: 541 CVSGRIKEAQQLVQRMK 557
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 39/284 (13%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIF-TEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G + + N+LL + K + E +F +E + EP+ +YN VI FC +GD
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSEL--LASCEPDVCSYNIVISGFCNAGDLH 129
Query: 200 SVYSILAEM--------------------------------RRKSIRPNATDFGLLLAGF 227
+ +L EM R PN + L+A F
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAF 189
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ K E+ K+L+ M + G + YN+ + +LCKL A+ ++ M+ G PN+
Sbjct: 190 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 249
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ L+ GF K GN++ A+KL M G P+ + LC+ ++ A +V
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+G P T +L+ GL K+ EA +++ +R SG
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQML----RRMAGSG 349
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 158/406 (38%), Gaps = 73/406 (17%)
Query: 20 NLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFS 79
N+ S +AGD AAL + E+ ++ A AP D +
Sbjct: 116 NIVISGFCNAGDLHAALELLEEMKS--------------------AGFAP----DAFTHT 151
Query: 80 IAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK 139
++ ++ A + L + P N + I + +A ++ AM+ EEM +
Sbjct: 152 PIITAMANAGDLDGAMDHLRSMGCDP----NVVTYTALIAAFARAKKLEEAMKLLEEMRE 207
Query: 140 YGLRQSVDALNALLLG-CILS---KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
G ++ N L+ C LS + VK++ G PN T+N ++ FC+
Sbjct: 208 RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG-----GFAPNVMTFNSLVDGFCKR 262
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G+ +L M K +RPN + L+ G K K+ + +VL+ M+ G+ Y
Sbjct: 263 GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTY 322
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I LCK + EEA+ +L M G P++ Y +IH F K G L A+K M
Sbjct: 323 SALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRK 382
Query: 316 GGCEPDSYCFFMFTYFLCQGGE-----------------------YETALK-VCRASM-- 349
PD + LC+ G+ Y T + +C++ M
Sbjct: 383 QRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLV 442
Query: 350 ----------AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P T +++ GL ++ EA L+ MK+
Sbjct: 443 EAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKR 488
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMID 128
D +S + L +A+ Q+L + PD+ V+S +++ ++ +
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV------VYSSIIHAFCKSGKLL 371
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A +T +EM K V N ++ G C L K E + I + + + P+ TY+
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK-IAEAQVILEQMQESGDVLPDVVTYST 430
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VI C+S +L M + P+ + ++ G K + E+ +LQ M++ G
Sbjct: 431 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 490
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
A V Y I LCK ++ +EA+ +++ M + G PNL TY +++G G ++ A+
Sbjct: 491 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 550
Query: 308 KLFASMTNG--GCEPDSYCF 325
+L M +G C PD+ +
Sbjct: 551 QLVQRMKDGRAECSPDAATY 570
>gi|326510149|dbj|BAJ87291.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 150/329 (45%), Gaps = 16/329 (4%)
Query: 69 PESPL--DRMAFSIAVSKLSQANHFNAISQLLE-ELKTRPDLRQNERFHVHSIVLYGQAN 125
P +P DR FS+AVS+L+ A + +S +L L P +E F + I LY A
Sbjct: 71 PHTPFLGDRSIFSLAVSRLTAAARPDLVSSVLSASLTALPAPHPSEGFLIRLIALYADAG 130
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M H++ TF + + S AL+ALL + + F + I P ++
Sbjct: 131 MPTHSLSTF----RLVVPPSDRALSALLAAYHDAGQPARAIQAFRDLSAELSIAPGVVSH 186
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N ++K +GD + + M K+ ++P+ +L G+ K Y +L+ +
Sbjct: 187 NVLLKCMVATGDVAGARQVFDGMPDKAGLQPDIVSCNEMLKGYLKTGDYAAFDLLLKEVT 246
Query: 245 --KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
K + V Y +R+ LC RS EA+ LL+ M + G+ PN + + +I G KEG
Sbjct: 247 GGKRRLKPNVTTYKLRMSGLCAKGRSFEAEELLEAMGANGVPPNRECFNTVIGGLCKEGE 306
Query: 303 LEGAKKLFASM-----TNG-GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ A LF M NG G P+ + M L + + AL+VC+ +A W P
Sbjct: 307 VGAAVALFKRMPEVPRPNGKGVSPNFETYIMLIEALVENNAFVPALEVCKECLANKWAPP 366
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
F +K L+ GL KV A EL MKK
Sbjct: 367 FQAVKGLIQGLVKSRKVKHAKELGMAMKK 395
>gi|449532274|ref|XP_004173107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Cucumis sativus]
Length = 394
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 155/326 (47%), Gaps = 38/326 (11%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+ ++L++LK +E + I YG+A++ D A Q FE + + +++V ++N+LL
Sbjct: 1 MEEILQQLKQETRFAPHEVIFCNVIAFYGRAHLPDRAFQVFERIPSFRCKRTVKSVNSLL 60
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
+ ++ E++ ++F + YG P++ T+N +I + C GD +V+ + EM+++ +
Sbjct: 61 AALLKNRQLEKMTQVFVDISN-YG-SPDACTFNILIHAACLCGDLDAVWGVFDEMQKRGV 118
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK------------------CGIA------ 249
+PN FG L+ G K ++ ++ + M K CG+
Sbjct: 119 KPNVVTFGTLIYGLSLNSKLKEALRLKEDMVKVYMIKPNASIYTTLIKGFCGVGELNFAF 178
Query: 250 --------SGVN----VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
S V VY+ I +L K R EE +L M G KP+ TY +I+G
Sbjct: 179 KLKEEMVTSNVKLVSAVYSTLISALFKHGRKEEVSDILREMGENGCKPDTVTYNAIINGH 238
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KE +LE A ++ M GC+PD + F +LC+ G+ + A+ + +G P
Sbjct: 239 CKENDLESAHRVMDEMVEKGCKPDVFSFNTIIGWLCKEGKLDKAMDLLEDMPRRGCPPDV 298
Query: 358 STMKSLVTGLASISKVAEANELIGLM 383
+ + + GL + ++ EA ++ M
Sbjct: 299 LSYRIIFDGLCEMMQLKEATSILDEM 324
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 13/285 (4%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H+ L G +D F+EM K G++ +V L+ G L+ +E R+ + K
Sbjct: 94 IHAACLCGD---LDAVWGVFDEMQKRGVKPNVVTFGTLIYGLSLNSKLKEALRLKEDMVK 150
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
VY I+PN+ Y +IK FC G+ + + + EM +++ + + L++ +K + E
Sbjct: 151 VYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSNVKLVSAVYSTLISALFKHGRKE 210
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+V +L+ M + G YN I CK E A ++D M+ +G KP++ ++ +I
Sbjct: 211 EVSDILREMGENGCKPDTVTYNAIINGHCKENDLESAHRVMDEMVEKGCKPDVFSFNTII 270
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
KEG L+ A L M GC PD + + LC+ + + A + + KG+V
Sbjct: 271 GWLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIIFDGLCEMMQLKEATSILDEMIFKGYV 330
Query: 355 PHFSTMKSLVTGLASISKVAEAN-ELIGLMKKRFPKSG----DMW 394
P ++ LV L E N EL+ ++ + DMW
Sbjct: 331 PRNESINKLVDRLCQ-----ECNMELLWMILNSLGRGNRMNMDMW 370
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 3/220 (1%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVY---SILAEMRRKSIRPNATDFGLLLAGFYKE 230
KV+G PN TYN +I +C+ G +Y +IL EM + PN+ F +L+ GF K+
Sbjct: 257 KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKD 316
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
KV + M+ G+ V YN + LC + EAK LLD MLS +KPN+ TY
Sbjct: 317 ENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITY 376
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI+G+ K+ LE A++LF ++ G P+ F + C+ G+ E A + + +
Sbjct: 377 NALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE 436
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
KG++P+ ST L+ G K+ E L+ M+ R K+
Sbjct: 437 KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKA 476
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 142/292 (48%), Gaps = 9/292 (3%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMI 127
SP + + F++ + + + +A ++ EE+++ +P + V+ + G+ N
Sbjct: 300 SP-NSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL-VNGLCNEGKLN-- 355
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A +EM L+ +V NAL+ G K EE + +F K G+ PN T+N
Sbjct: 356 -EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGK-QGLTPNVITFNT 413
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ +C+ G + + M K PNA+ + L+ GF +E K E+V +L M+ G
Sbjct: 414 LLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRG 473
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + YNI I + C+ K ++A L+D ML +G+KP+ TY L++G+ EGNL A
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAAL 533
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
L M G + + + C+ G+ E A + + KG +P+ +T
Sbjct: 534 NLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 585
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 127/294 (43%), Gaps = 5/294 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ F+ ++ L + N +++++K P++ + G+ + A
Sbjct: 231 ITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTL-IDGYCKMGRVGKMYKADA 289
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+EM + + + N L+ G +N ++F E + G++P TYN ++
Sbjct: 290 ILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEM-QSQGLKPTVVTYNSLVNGL 348
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C G + +L EM +++PN + L+ G+ K+ E+ ++ + K G+ V
Sbjct: 349 CNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNV 408
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N + CK + EEA L ML +G PN TY LI GF +EG +E K L
Sbjct: 409 ITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNE 468
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G + D+ + + C+ E + A ++ + KG P T L+ G
Sbjct: 469 MQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNG 522
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 3/204 (1%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ + + + V + EM R+ I PN F ++ G K K G V+ M+
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258
Query: 246 CGIASGVNVYNIRIQSLCKLKRS---EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
G V YN I CK+ R +A A+L M+ + PN T+ LI GF K+ N
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L A K+F M + G +P + LC G+ A + ++ P+ T +
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ G + EA EL + K+
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQ 402
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 37/251 (14%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ V+ L N LL+E+ + +L+ N + I Y + +++ A + F+
Sbjct: 339 VTYNSLVNGLCNEGKLNEAKVLLDEMLSS-NLKPNVITYNALINGYCKKKLLEEARELFD 397
Query: 136 EMDKYGLRQSVDALNALLLG---------------CILSKNY------------------ 162
+ K GL +V N LL G +L K +
Sbjct: 398 NIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREG 457
Query: 163 --EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
EEVK + E + G++ ++ TYN +I ++CE + ++ EM K ++P+ +
Sbjct: 458 KMEEVKNLLNEM-QCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTY 516
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+LL G+ E + + MEK G + V YN+ IQ C+ + E+A LL+ ML
Sbjct: 517 NILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLE 576
Query: 281 RGIKPNLDTYK 291
+G+ PN TY+
Sbjct: 577 KGLIPNRTTYE 587
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 19/179 (10%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV + + ++ EM G++ N L+ K ++ R+ E G
Sbjct: 450 IVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLD-KG 508
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ TYN ++ +C G+ + ++ +M ++ N + +L+ G+ ++ K ED
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L M + G+ Y I + + M+ +G P+++ HL H
Sbjct: 569 GLLNEMLEKGLIPNRTTYEI----------------IKEEMMEKGFLPDIEG--HLYHA 609
>gi|242041671|ref|XP_002468230.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
gi|241922084|gb|EER95228.1| hypothetical protein SORBIDRAFT_01g042160 [Sorghum bicolor]
Length = 396
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 167/344 (48%), Gaps = 8/344 (2%)
Query: 52 ESNPFRILDICCGASLAPES-PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN 110
E NP +++ S A ES + + +AV++L+ +AI+ +++ K P ++ +
Sbjct: 10 ERNPDKLVSRFIAKSTASESFRNEHRVYEVAVARLASFGRHDAIAAIIDSQK--PFIKAS 67
Query: 111 ER-FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
F I L G+A+M HA F ++ +S+ NALL + + +++ + F
Sbjct: 68 SVGFAARLIRLCGRASMPSHAAAIFHDLPPK--HKSIMTFNALLATYVDASDFDALAIAF 125
Query: 170 TEFPKVY-GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
+ + I P +Y+ +I + C+ + S+ ++ M ++ + P+ F ++L GFY
Sbjct: 126 QQILASHPTIVPTVYSYSILISALCQKRELSAALDVITLMEKRGVSPDNIFFNIVLNGFY 185
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
+ ++D KV ++M++ I YN +++ L R E+A AL++ M G KP+
Sbjct: 186 RNDSFDDAEKVWEIMKERNIEPDAKCYNAKLRGLISQGRVEDAVALIERMQKEGPKPDSV 245
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
+Y LI G+ KEG L AKK++ + C P+ F + E + AL C
Sbjct: 246 SYNELIRGYCKEGRLNQAKKVYDDLIKNECAPNRGTFHTLVPHFVEARELDCALSCCHEI 305
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSG 391
+ S ++ +VT L + S++ EA ++ L + +P+ G
Sbjct: 306 FRRKCRVQCSLLQGVVTALIAASRMEEARRIVQLGRTSYYPRKG 349
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 164/348 (47%), Gaps = 37/348 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++S + KL+++ +F+A+ Q+L ++ R ++R E + I YG+A +D A+
Sbjct: 80 DYPSYSSLIYKLAKSRNFDAVDQILRLVRYR-NVRCRESLFMALIQHYGKAGWVDKAVDV 138
Query: 134 FEEMDKYGLRQSVDALNAL----------------------------------LLGCILS 159
F ++ + +++ +LN L L+ L
Sbjct: 139 FHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLD 198
Query: 160 K-NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
K ++E ++F E ++ ++P+ TYN +I C + D S+L +M +K IRPNA
Sbjct: 199 KCDWEAACKVFDEMLEM-EVQPSVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAV 257
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
FGLL+ G +Y + K++ ME G G+ Y + + L K + +EAK LL M
Sbjct: 258 TFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKILLGEM 317
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
R IKP+ Y L++ EG + A + M GC+P++ + M C+ G++
Sbjct: 318 KKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDF 377
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
++ L V A +A P +T +V+GL + A ++ +M K+
Sbjct: 378 DSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVLEVMGKK 425
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 36/294 (12%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI---------------FTEF 172
+ A+ F + + G R + ++L+ S+N++ V +I F
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMAL 122
Query: 173 PKVYG----IEPNSETYNK---------------VIKSFCESGDSSSVYSILAEMRRKSI 213
+ YG ++ + ++K +I ++G+ S + +
Sbjct: 123 IQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
RPN+ F +L+ GF + +E KV M + + V YN I LC+ +A +
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATS 242
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL+ M+ + I+PN T+ L+ G G AKKL M GC+P + + L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLG 302
Query: 334 QGGEYETALKVCRASMAKGWV-PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G+ + A K+ M K + P F LV L + +V EA + M+ +
Sbjct: 303 KRGKIDEA-KILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMK 355
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 1/229 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F ++ ++ G + +Y+ +I +S + +V IL +R +++R + F
Sbjct: 63 EEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMA 121
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ + K + V + + N I L E+AK+ DG
Sbjct: 122 LIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
++PN ++ LI GF + + E A K+F M +P + FLC+ + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKAT 241
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+ + K P+ T L+ GL + EA +L+ M+ R K G
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPG 290
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+ ID A EM K ++ N L+ E R TE ++ G +PN
Sbjct: 302 GKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEM-QMKGCKPN 360
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY ++ FC GD S ++L M P F +++G K + VL+
Sbjct: 361 AATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVLE 420
Query: 242 MMEKCGIASGVNVYNIRIQSLC 263
+M K ++ G + + + LC
Sbjct: 421 VMGKKKLSFGYSAWQNLLCDLC 442
>gi|357131120|ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like [Brachypodium distachyon]
Length = 463
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 165/347 (47%), Gaps = 8/347 (2%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDR-MAFSIAVSKLSQANHFNAISQLLEELKTR 104
I L E +P +++ AS A DR + +AVS+L+ ++I +L K R
Sbjct: 80 IKGLLRERDPEKLVSDFVAASSASARFRDRHRVYEMAVSRLASLGRQDSIETILGAQK-R 138
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
E F I LYG+A M A TF E+ + LNA+L +K ++
Sbjct: 139 FLETSKEGFATRLIGLYGRAAMPAQASATFHELP--AQLKCTMTLNAVLTAYYQAKEFDA 196
Query: 165 VKRIFTEFPKVYG-IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+ F E + + P+ +YN +I++ C+ D S+ +++ M + + P+ F L
Sbjct: 197 LATAFQEISVSHPLVVPSVYSYNILIRALCQKHDLSAALNVITLMEKCGVLPDNISFNTL 256
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L GFY+ + +D V +MM+ + YN +++ L R E+A A+++ M G
Sbjct: 257 LNGFYQNGRMDDAEAVWEMMKGWNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGP 316
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
KP+ +Y LI G+ G LE AKKL+ + C P+ + L Q GE + A++
Sbjct: 317 KPDTVSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNRGTYETLLPRLLQAGELDCAVR 376
Query: 344 VCRASMA---KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
C ++ K S ++ +VT L S+V EA +++ L +K++
Sbjct: 377 YCHGLLSPNTKNCRVDRSLLQDVVTTLVEASRVDEAAKIVELGRKKY 423
>gi|297830004|ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 409
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 151/302 (50%), Gaps = 4/302 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+++ ++K QA F+ I +++ +K R +E F + + +YG A I+ A++
Sbjct: 98 YALLINKFGQAKMFDEIEEVMSTIKLEKRCRFSEDFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M +G S + N +L + +K ++E+ +IF PK+ G+E ++ N +IK CESG
Sbjct: 158 MPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKL-GVEIDACCLNILIKGLCESG 216
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ + +L E ++ RPN F L+ GF + K+E+ K+L+ MEK I +N
Sbjct: 217 NLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG-FGKEGNLEGAKKLFASMTN 315
I I L K R EE LL+ M +G +PN TY+ +++G K+ NLE AK++ + M +
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNLE-AKEMMSQMIS 335
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P + LC+ V R + G+VP V + S + ++
Sbjct: 336 WGMRPSFLSYKKMVLGLCETKSVAEMDWVLRKMVNHGFVPKTGMWWKAVCCVVSKNNDSQ 395
Query: 376 AN 377
AN
Sbjct: 396 AN 397
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 80/189 (42%)
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+G + IL M P+A F +L ++++ K+ K G+
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSAKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
NI I+ LC+ E A LLD + +PN+ T+ LI GF +G E A KL M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPKQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
EPD+ F + L + G E + + KG P+ T + ++ GL +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKLKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 375 EANELIGLM 383
EA E++ M
Sbjct: 325 EAKEMMSQM 333
>gi|388521641|gb|AFK48882.1| unknown [Medicago truncatula]
Length = 129
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 81/118 (68%)
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M++ G KPN +Y HL++GF +EGNLE AK LFA M G + D C+F YFLC+G E
Sbjct: 1 MITSGRKPNSVSYYHLMNGFCREGNLEEAKGLFADMKKRGFKVDGQCYFTLVYFLCEGDE 60
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+E AL + + +AKGWVP+F+TMK LV GL +SKV +A ELI +K++F + D W+
Sbjct: 61 FEWALDIAKECIAKGWVPNFTTMKKLVNGLVGVSKVDDAKELIKEIKEKFAEKSDRWD 118
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+PN+ + L+ GF +E E+ + M+K G Y + LC+ E A
Sbjct: 7 KPNSVSYYHLMNGFCREGNLEEAKGLFADMKKRGFKVDGQCYFTLVYFLCEGDEFEWALD 66
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+ +++G PN T K L++G ++ AK+L +
Sbjct: 67 IAKECIAKGWVPNFTTMKKLVNGLVGVSKVDDAKELIKEI 106
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 144/315 (45%), Gaps = 8/315 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D ++ ++ L + +A +L+ + R PD+ + IV Q N +D A
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVIT----YTSLIVGCCQTNALDEA 181
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ E+M + GL A NALL G EEV ++ E + G EP++ +YN V+
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA-GREPDTFSYNTVVA 240
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
CESG IL +M K P+ + L+ GF K K ++ ++L+ M A
Sbjct: 241 CLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I + R +A +++ M GI P+L TY L+ G K G LE A +L
Sbjct: 301 TVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL 360
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M C PD + + LC+ G+ + A + + +G P+ T +++ G
Sbjct: 361 EVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420
Query: 371 SKVAEANELIGLMKK 385
KV E ++++ LMK+
Sbjct: 421 GKVDEGHKVLELMKE 435
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 12/296 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +SI V+ L + + LLE + R F+ I + +A +D +
Sbjct: 371 DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM-IDGFCKAGKVDEGHKV 429
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E M + V + L+ G Y + R+ F + GI P+ +Y+ +++ C
Sbjct: 430 LELMKEVSCTPDVVTYSTLIDG------YCKANRMQDAF-AILGISPDKASYSSMLEGLC 482
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G ++ M ++ P ++ + L++ G + ++ K+LQ+M + G +
Sbjct: 483 STGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLY 542
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I I LCK KR E+A +LD ML +G P++ TY LI GF K ++ A + F +M
Sbjct: 543 TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTM 602
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP----HFSTMKSLVT 365
+ GCEPD + + CQ G E A++V + + KG P +FS M+SL T
Sbjct: 603 RDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTT 658
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 12/315 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
D +A++ ++ L + N +S+LLEE+ R+ + F +++V ++ + A +
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAG--REPDTFSYNTVVACLCESGKYEEAGK 253
Query: 133 TFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
E+M + V N+L+ G C +SK +E +R+ + P TY +I
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSK-MDEAERLLEDMVG-RRCAPTVITYTTLIGG 311
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
F + + Y ++ +M + I P+ + LL G K K E+ ++L++M + A
Sbjct: 312 FSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPD 371
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y+I + LCKL + ++A+ LL+ ML RG +PNL T+ +I GF K G ++ K+
Sbjct: 372 VVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLE 431
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M C PD + C+ + A + G P ++ S++ GL S
Sbjct: 432 LMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LGISPDKASYSSMLEGLCSTG 485
Query: 372 KVAEANELIGLMKKR 386
KV EA E++ LM K+
Sbjct: 486 KVEEAQEVMDLMTKQ 500
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 143/317 (45%), Gaps = 16/317 (5%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
+ I + L Q + QLL+E+ PD V++ ++ G M ID A
Sbjct: 94 TYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDA------AVYNCLIAGLCKMGKIDAAR 147
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ M + V +L++GC + +E +++ + K G+ P++ YN ++
Sbjct: 148 NVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM-KESGLTPDTVAYNALLNG 206
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--EKCGIA 249
C+ V +L EM P+ + ++A + KYE+ GK+L+ M +KCG
Sbjct: 207 LCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCG-- 264
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN + CK+ + +EA+ LL+ M+ R P + TY LI GF + L A ++
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRV 324
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G PD + LC+ G+ E A ++ + K P T LV GL
Sbjct: 325 MEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCK 384
Query: 370 ISKVAEANELIGLMKKR 386
+ KV +A L+ +M +R
Sbjct: 385 LGKVDDARLLLEMMLER 401
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
++ R + F P + TY +I C+ Y +L EM +K P+A + L
Sbjct: 74 DLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCL 133
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+AG K K + VL+MM + V Y I C+ +EA+ L++ M G+
Sbjct: 134 IAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGL 193
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ Y L++G K+ LE KL M G EPD++ + LC+ G+YE A K
Sbjct: 194 TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGK 253
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + K P T SL+ G +SK+ EA L+ M R
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
YS E +P+ + +G L+ GF + + V ++ M + V +N +++
Sbjct: 9 YSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKA 68
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
C++ + A + G + P TY LIHG + ++ A +L M C PD
Sbjct: 69 YCQIGDLDRALSHFRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPD 126
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + LC+ G+ + A V + + + VP T SL+ G + + EA +L+
Sbjct: 127 AAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLME 186
Query: 382 LMKK 385
MK+
Sbjct: 187 KMKE 190
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 5/176 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG--CILSKNYEEVKRIFTEFPKVYGIEPNSET 184
++ A + + M K G + + AL++G C + + E +K + + G EPN T
Sbjct: 487 VEEAQEVMDLMTKQGCPPT-SSHYALIIGGLCDVERGDEALKML--QVMSERGCEPNLYT 543
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ +I C++ ++L M K P+ + L+ GF K +K + + + M
Sbjct: 544 YSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMR 603
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
G YNI I C+ E+A ++ ML +G P+ TY L+ E
Sbjct: 604 DSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
ML+R P++ T+ ++ + + G+L+ A F C P ++ + + + LCQ
Sbjct: 50 MLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKM--WCSPTAFTYCILIHGLCQCQR 107
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A ++ + K P + L+ GL + K+ A ++ +M +R
Sbjct: 108 IDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLER 156
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 37/326 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++S + KL+++ F A+ +L L+ R ++R NE V I YG+A++++ ++ F +
Sbjct: 83 SYSSLIYKLARSRRFEAVETILGHLRNR-NIRCNETLFVALIQHYGKAHLVEKGIELFHQ 141
Query: 137 MDKY-----------------------------------GLRQSVDALNALLLGCILSKN 161
M + G R + + N ++ G I
Sbjct: 142 MPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGG 201
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+E+ +F E + G++P+ TYN + C G+ + + M K PNA +
Sbjct: 202 WEQACNLFDEMLE-KGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYA 260
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
LL+ G+ KY++ K++ ME G Y + + L K +E ++LL+ M R
Sbjct: 261 LLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKR 320
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+KP++ TY L++ KEG + A K+ M GGC+P++ + M C G+++ A
Sbjct: 321 RLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGA 380
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGL 367
+K+ A + G PH T SLV GL
Sbjct: 381 MKILNAMLMSGHYPHLKTFASLVVGL 406
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G + + +Y+ +I S +V +IL +R ++IR N T F L+ + K H E
Sbjct: 76 GFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKG 135
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + +N+ + +L + +A + G +PN +Y +I G
Sbjct: 136 IELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKG 195
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K+G E A LF M G +P + LC+ GE +TAL + + KG P+
Sbjct: 196 WIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPN 255
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T L+ G I K EA +L+
Sbjct: 256 AVTYALLMEGWCFIGKYKEAKKLM 279
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F+ M + G + L+ G Y+E K++ + + +G + Y
Sbjct: 237 MDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDM-EFHGCKLRPVNYG 295
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ ++G+ + S+L EM+++ ++P+ + +L+ KE K D KVL M+
Sbjct: 296 VLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVG 355
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
G Y + I C + A +L+ ML G P+L T+ L+ G K N
Sbjct: 356 GCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGEN 411
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
N +E++ + E K ++P+ TYN ++ C+ G Y +L +M+ PNA +
Sbjct: 306 NIDEMESLLNEMKK-RRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATY 364
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA-LLDGML 279
+++ G+ ++ K+L M G + + + L K + +++ +L+ M
Sbjct: 365 RMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEME 424
Query: 280 SRGIKPNLDTYKHLI 294
R ++ + +T++ LI
Sbjct: 425 KRQLRFDAETWRILI 439
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 37/326 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++S + KL+++ F A+ +L L+ R ++R NE V I YG+A++++ ++ F +
Sbjct: 83 SYSSLIYKLARSRRFEAVETILGHLRNR-NIRCNETLFVALIQHYGKAHLVEKGIELFHQ 141
Query: 137 MDKYGLRQSVDALNALL-----------------------------------LGCILSKN 161
M + +++ + N LL G I
Sbjct: 142 MPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGG 201
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+E+ +F E + G++P+ TYN + C G+ + + M K PNA +
Sbjct: 202 WEQACNLFDEMLE-KGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYA 260
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
LL+ G+ KY++ K++ ME G Y + + L K +E ++LL+ M R
Sbjct: 261 LLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKR 320
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+KP++ TY L++ KEG + A K+ M GGC+P++ + M C G+++ A
Sbjct: 321 RLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDGA 380
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGL 367
+K+ A + G PH T SLV GL
Sbjct: 381 MKILNAMLMSGHYPHLKTFASLVVGL 406
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G + + +Y+ +I S +V +IL +R ++IR N T F L+ + K H E
Sbjct: 76 GFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYGKAHLVEKG 135
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + +N+ + +L + +A + +PN +Y +I G
Sbjct: 136 IELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKG 195
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K+G E A LF M G +P + F LC+ GE +TAL + + KG P+
Sbjct: 196 WIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPN 255
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T L+ G I K EA +L+
Sbjct: 256 AVTYALLMEGWCFIGKYKEAKKLM 279
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 1/176 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F+ M + G + L+ G Y+E K++ + + +G + Y
Sbjct: 237 MDTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDM-EFHGCKLRPVNYG 295
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ ++G+ + S+L EM+++ ++P+ + +L+ KE K D KVL M+
Sbjct: 296 VLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVG 355
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
G Y + I C + A +L+ ML G P+L T+ L+ G K N
Sbjct: 356 GCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGEN 411
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
N +E++ + E K ++P+ TYN ++ C+ G Y +L +M+ PNA +
Sbjct: 306 NIDEMESLLNEMKK-RRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATY 364
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA-LLDGML 279
+++ G+ ++ K+L M G + + + L K + +++ +L+ M
Sbjct: 365 RMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDYVCFVLEEME 424
Query: 280 SRGIKPNLDTYKHLI 294
R ++ + +T++ LI
Sbjct: 425 KRQLRFDAETWRILI 439
>gi|147778708|emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
Length = 393
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 150/310 (48%), Gaps = 7/310 (2%)
Query: 49 LKSESNPFRILD-ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
L++ + +LD +C P L +++ ++KL+QA F+AI +++ LK
Sbjct: 62 LRNPESVMPVLDSVCKRKDFKPNEAL----YTLVINKLAQARMFDAIEDVIKTLKIDKQC 117
Query: 108 RQNERFHVHSIVLYGQ-ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
R ++ F + I +YG A D A++T +M K+ SV N +L + +K ++ V
Sbjct: 118 RLSDVFFYNVIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVH 177
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+++ P++ G+E ++ N ++K C SG+ + +L E ++ RPN F L+ G
Sbjct: 178 KVYAGAPEL-GVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHG 236
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ + E +L+ ME+ G+ V+NI I L K R EE LL M +G PN
Sbjct: 237 LCESGRVEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPN 296
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+Y+ +++G G AK+ M + G P + M Y LC+ + + +
Sbjct: 297 AGSYQEVLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMVIYGLCKENLVADVVWILK 356
Query: 347 ASMAKGWVPH 356
+ +G+VP
Sbjct: 357 QMVEQGFVPE 366
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 2/200 (1%)
Query: 185 YNKVIKSFCE-SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
YN VIK + +G L +M + P+ F L+L +++ V KV
Sbjct: 125 YN-VIKVYGNVAGRPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGA 183
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G+ NI ++ LC+ + A LLD + +PN+ T+ L+HG + G +
Sbjct: 184 PELGVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGRV 243
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
EGA L M G PD+ F + L + G E +++ KG P+ + + +
Sbjct: 244 EGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQEV 303
Query: 364 VTGLASISKVAEANELIGLM 383
+ G+ + +A E + M
Sbjct: 304 LYGVLDTGRFGKAKEFMCQM 323
>gi|225462369|ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 2/304 (0%)
Query: 54 NPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERF 113
NP ++ + S + + +++ ++KL+QA F+AI +++ LK R ++ F
Sbjct: 64 NPESVMPVLDSVSKRKDFKPNEALYTLVINKLAQARMFDAIEDVIKTLKIDKQCRLSDVF 123
Query: 114 HVHSIVLYGQ-ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+ I +YG A D A++T +M K+ SV N +L + +K ++ V +++
Sbjct: 124 FYNVIKVYGNVAGQPDRAVETLFDMPKFHCWPSVKTFNLVLNMLVSAKRFDVVHKVYAGA 183
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
P++ G+E ++ N ++K C SG+ + +L E ++ RPN F L+ G + +
Sbjct: 184 PEL-GVEIDACCLNILVKGLCRSGNVDAACELLDEYPKQRCRPNVRTFSTLMHGLCESGR 242
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E +L+ ME+ G+ V+NI I L K R EE LL M +G PN +Y+
Sbjct: 243 VEGALGLLERMEREGVYPDTVVFNILISGLRKRGRVEEGMELLGRMKLKGCYPNAGSYQE 302
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+++G G AK+ M + G P + M Y LC+ + + + + +G
Sbjct: 303 VLYGVLDTGRFGKAKEFMCQMIDEGVSPSFVSYKMMIYGLCKENLVADVVWILKQMVEQG 362
Query: 353 WVPH 356
+VP
Sbjct: 363 FVPE 366
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 146/326 (44%), Gaps = 10/326 (3%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
I+D+ P D ++ +S L + ++L+++ TR D N +
Sbjct: 315 IEIMDVMLQEGYDP----DVYTYNSVISGLCKLGEVKEAVEVLDQMITR-DCSPNTVTYN 369
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I + N ++ A + + G+ V N+L+ G L++N+ +F E +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RS 428
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G EP+ TYN +I S C G ++L +M + + L+ GF K +K +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ ME G++ YN I LCK +R E+A L+D M+ G KP+ TY L+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG--W 353
F + G+++ A + +MT+ GCEPD + LC+ G E A K+ R+ KG
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
PH ++ GL K EA L
Sbjct: 609 TPH--AYNPVIQGLFRKRKTTEAINL 632
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 139/311 (44%), Gaps = 1/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D F++ + L +A+ +LE++ + L +E+ + Y + +D A++
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSY-GLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M ++G S ++N ++ G E+ E G P+ T+N ++ C
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G I+ M ++ P+ + +++G K + ++ +VL M +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I +LCK + EEA L + S+GI P++ T+ LI G N A +LF M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ GCEPD + + M LC G+ + AL + + G T +L+ G +K
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 374 AEANELIGLMK 384
EA E+ M+
Sbjct: 487 REAEEIFDEME 497
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 18/315 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--ID 128
D+ F+ V+ L +A H ++++ + PD+ + ++ V+ G + +
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV------YTYNSVISGLCKLGEVK 347
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY---GIEPNSETY 185
A++ ++M + N L+ EE TE +V GI P+ T+
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA----TELARVLTSKGILPDVCTF 403
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I+ C + + + EMR K P+ + +L+ + K ++ +L+ ME
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G A V YN I CK ++ EA+ + D M G+ N TY LI G K +E
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +L M G +PD Y + C+GG+ + A + +A + G P T +L++
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 366 GLASISKVAEANELI 380
GL +V A++L+
Sbjct: 584 GLCKAGRVEVASKLL 598
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 126/301 (41%), Gaps = 6/301 (1%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
Q + + +++E +PD F+ + L N + + +M +G++ V
Sbjct: 134 QDEILSVVDWMIDEFGLKPD----THFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDV 189
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
N L+ + + + P YG+ P+ +T+ V++ + E GD I
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPS-YGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ-MMEKCGIASGVNVYNIRIQSLCKL 265
+M + +++ GF KE + ED +Q M + G +N + LCK
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ A ++D ML G P++ TY +I G K G ++ A ++ M C P++ +
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC+ + E A ++ R +KG +P T SL+ GL A EL M+
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 386 R 386
+
Sbjct: 429 K 429
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 12/321 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D F+ + L + +L EE++++ PD + S+ G+ +D A
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD-EFTYNMLIDSLCSKGK---LDEA 454
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++M+ G +SV N L+ G + E + IF E +V+G+ NS TYN +I
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-EVHGVSRNSVTYNTLID 513
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+S ++ +M + +P+ + LL F + + ++Q M G
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ Y I LCK R E A LL + +GI Y +I G ++ A LF
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLF 633
Query: 311 ASM-TNGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M PD+ + + LC GG A+ + KG+VP FS++ L GL
Sbjct: 634 REMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLL 693
Query: 369 SISKVAEANELIGLM--KKRF 387
++S +L+ ++ K RF
Sbjct: 694 TLSMEETLVKLVNMVMQKARF 714
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
S T K++ S D S+ + +K + P + +L + ++D+ K+L
Sbjct: 47 SSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKIL 106
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGK 299
+ M+ G + + I I+S + + +E +++D M+ G+KP+ Y +++
Sbjct: 107 EDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD 166
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+L+ + A M+ G +PD F + LC+ + A+ + + G VP T
Sbjct: 167 GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 360 MKSLVTG 366
+++ G
Sbjct: 227 FTTVMQG 233
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 145/326 (44%), Gaps = 10/326 (3%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
I+D+ P D ++ +S L + + L+++ TR D N +
Sbjct: 315 IEIMDVMLQEGYDP----DVYTYNSVISGLCKLGEVKEAVEFLDQMITR-DCSPNTVTYN 369
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I + N ++ A + + G+ V N+L+ G L++N+ +F E +
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM-RS 428
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G EP+ TYN +I S C G ++L +M + + L+ GF K +K +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIRE 488
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ ME G++ YN I LCK +R E+A L+D M+ G KP+ TY L+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLT 548
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG--W 353
F + G+++ A + +MT+ GCEPD + LC+ G E A K+ R+ KG
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIAL 608
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
PH ++ GL K EA L
Sbjct: 609 TPH--AYNPVIQGLFRKRKTTEAINL 632
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 139/311 (44%), Gaps = 1/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D F++ + L +A+ +LE++ + L +E+ + Y + +D A++
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSY-GLVPDEKTFTTIMQGYIEEGDLDGALRI 246
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M ++G S ++N ++ G E+ E G P+ T+N ++ C
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G I+ M ++ P+ + +++G K + ++ + L M +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTV 366
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I +LCK + EEA L + S+GI P++ T+ LI G N A +LF M
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ GCEPD + + M LC G+ + AL + + G T +L+ G +K+
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKI 486
Query: 374 AEANELIGLMK 384
EA E+ M+
Sbjct: 487 REAEEIFDEME 497
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 18/315 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--ID 128
D+ F+ V+ L +A H ++++ + PD+ + ++ V+ G + +
Sbjct: 294 DQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDV------YTYNSVISGLCKLGEVK 347
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY---GIEPNSETY 185
A++ ++M + N L+ EE TE +V GI P+ T+
Sbjct: 348 EAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA----TELARVLTSKGILPDVCTF 403
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I+ C + + + EMR K P+ + +L+ + K ++ +L+ ME
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G A V YN I CK + EA+ + D M G+ N TY LI G K +E
Sbjct: 464 SGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +L M G +PD + + C+GG+ + A + +A + G P T +L++
Sbjct: 524 ASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 366 GLASISKVAEANELI 380
GL +V A++L+
Sbjct: 584 GLCKAGRVEVASKLL 598
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 123/301 (40%), Gaps = 6/301 (1%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
Q + ++++ +PD F+ + L N + +M +G++ V
Sbjct: 134 QDEILGVVHWMIDDFGLKPD----THFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDV 189
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
N L+ + + + P YG+ P+ +T+ +++ + E GD I
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPS-YGLVPDEKTFTTIMQGYIEEGDLDGALRIRE 248
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ-MMEKCGIASGVNVYNIRIQSLCKL 265
+M + +++ GF KE + ED +Q M + G +N + LCK
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ A ++D ML G P++ TY +I G K G ++ A + M C P++ +
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTY 368
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC+ + E A ++ R +KG +P T SL+ GL A EL M+
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 386 R 386
+
Sbjct: 429 K 429
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 12/321 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D F+ + L + +L EE++++ PD + S+ G+ +D A
Sbjct: 399 DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD-EFTYNMLIDSLCSKGK---LDEA 454
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++M+ G +SV N L+ G + E + IF E +V+G+ NS TYN +I
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM-EVHGVSRNSVTYNTLID 513
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+S ++ +M + +P+ + LL F + + ++Q M G
Sbjct: 514 GLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ Y I LCK R E A LL + +GI Y +I G ++ A LF
Sbjct: 574 DIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLF 633
Query: 311 ASM-TNGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M PD+ + + LC GG A+ + KG+VP FS++ L GL
Sbjct: 634 REMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLL 693
Query: 369 SISKVAEANELIGLM--KKRF 387
++S +L+ ++ K RF
Sbjct: 694 TLSMEETLVKLVNMVMQKARF 714
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 128/302 (42%), Gaps = 2/302 (0%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQS 145
SQA+ A+ +L +P+ + ++ G++ D + E+M G
Sbjct: 59 SQADDSAAL-RLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMG 117
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
L+ + +E+ + +G++P++ YN+++ + + V
Sbjct: 118 TSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAH 177
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
A+M I+P+ + F +L+ + H+ +L+ M G+ + +Q +
Sbjct: 178 AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEE 237
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN-GGCEPDSYC 324
+ A + + M+ G + + ++HGF KEG +E A M+N G PD Y
Sbjct: 238 GDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYT 297
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
F LC+ G + A+++ + +G+ P T S+++GL + +V EA E + M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357
Query: 385 KR 386
R
Sbjct: 358 TR 359
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 163/365 (44%), Gaps = 36/365 (9%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
A LK + +P + L++ + + + KL +F A+ +L E + D
Sbjct: 12 AVLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDID 71
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
E ++ ++ YG+ + A+ FE MD Y SV + NA++ + S +++
Sbjct: 72 NSLLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAH 131
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
++F V GI P+ T+ IKSFC + S +L M + + NA + ++AG
Sbjct: 132 KVFLRMKNV-GIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAG 190
Query: 227 FYKEH----KYE------------DVG-------------------KVLQMMEKCGIASG 251
FY+E+ YE DV ++L + K G+ S
Sbjct: 191 FYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSN 250
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ +NI IQ LC+ A ++LD ++ G+ P++ TY LI G K N+ A+K
Sbjct: 251 LFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLH 310
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ NGG EPD + + C+ G + A K+ + ++ KG+VP T SL+ GL
Sbjct: 311 KLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQND 370
Query: 372 KVAEA 376
++ A
Sbjct: 371 EIDRA 375
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 125/302 (41%), Gaps = 47/302 (15%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALL-----LGCILSKNYEEVKRIFTEFPKVYG 177
Q +I A+Q EM + G + N ++ +GC+ N I G
Sbjct: 403 QEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI------AKG 456
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ T+N +I +C+ + IL +M + P+ + +L G K K ED+
Sbjct: 457 YVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLM 516
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ + M + G YNI +SLCK + EA L+D +L++GI P+ ++ +I GF
Sbjct: 517 ETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGF 576
Query: 298 GKEGNLEGA------------------------------------KKLFASMTNGGCEPD 321
G+L+GA +KLF M GGC PD
Sbjct: 577 ANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPD 636
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+Y + + C G ++ K + KG++P +T ++ L +V EA ++I
Sbjct: 637 TYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIH 696
Query: 382 LM 383
M
Sbjct: 697 FM 698
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 7/255 (2%)
Query: 149 LNALLLGCILSKNYEEVKRI-----FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
LNA+ +++ YEE R+ F + ++ GI P+ T+NK++ + C+ G+
Sbjct: 179 LNAVAYCTVVAGFYEENYRVEAYELFNDMLRI-GIFPDVSTFNKLLHTLCKKGEVQESER 237
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+L ++ +K + N F + + G ++ +L + + G+ V YN I LC
Sbjct: 238 LLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLC 297
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
K EA+ L +++ G++P+ TY LI G+ K G L+ A+K+ G PD +
Sbjct: 298 KNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEF 357
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ LCQ E + AL + A++ KG P L+ GL + +A +++ M
Sbjct: 358 TYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEM 417
Query: 384 KKRFPKSGDMWNAAL 398
+ S D+W L
Sbjct: 418 SEN-GCSSDIWTYNL 431
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 1/251 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F +M + G+ V N LL +E +R+ + K G+ N T+N I
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLK-KGMCSNLFTFNIFI 258
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C G S S+L + R+ + P+ + L+ G K + K L + G+
Sbjct: 259 QGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLE 318
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I CK+ + A+ +L G + +G P+ TY LI+G + ++ A L
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F + G +P + M LCQ G AL++ G T ++ GL
Sbjct: 379 FNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCK 438
Query: 370 ISKVAEANELI 380
+ V++AN L+
Sbjct: 439 MGCVSDANNLM 449
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++P YN +IK C+ G ++ EM + + L++ G K D
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ G V +N I CK + E +L+ M S G+ P++ TY +++G
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNG 505
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K E + F +M GC P+ + + T LC+ G+ AL + + KG P
Sbjct: 506 LSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
+ ++++G A+ + A +L M +++ S
Sbjct: 566 TVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS 599
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN +I C++ + L ++ + P+ + L+ G+ K ++
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA 340
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+LQ G Y I LC+ + A AL + L +G+KP + Y LI G
Sbjct: 341 EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+EG + A ++ M+ GC D + + + LC+ G A + ++AKG+VP
Sbjct: 401 LCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPD 460
Query: 357 FSTMKSLVTG 366
T +L+ G
Sbjct: 461 VFTFNTLIDG 470
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 36/290 (12%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M+ AM + + + GL V N L+ G + N E ++ + G+EP+ TY
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVN-GGLEPDGFTY 324
Query: 186 NKVIKSFCESGDSSSVYSILA-------------------------EMRR---------- 210
N +I +C+ G + IL E+ R
Sbjct: 325 NTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALG 384
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
K ++P + +L+ G +E +++ M + G +S + YN+ I LCK+ +
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSD 444
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L++ +++G P++ T+ LI G+ K+ +E ++ M + G PD +
Sbjct: 445 ANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLN 504
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
L + + E ++ + KG VP+ T L L KV EA +L+
Sbjct: 505 GLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLV 554
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 2/230 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ +Q +M +G+ V N++L G + E++ F + G PN TYN
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVE-KGCVPNKITYN 535
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM-EK 245
+ +S C++G + ++ E+ K I P+ F +++GF + ++ + M E+
Sbjct: 536 ILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQ 595
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
++ YNI I + + + L M + G P+ TY+ +I GF GN +
Sbjct: 596 YKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDS 655
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K M G P F LC A+ + + G VP
Sbjct: 656 GYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A+ +E+ G+ + ++ G + + + ++F + Y + +
Sbjct: 543 KAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTT 602
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-VLQ 241
TYN +I +F E D + EM P+ + +++ GF + K +L+
Sbjct: 603 ATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLE 662
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
M+EK G + + I LC R EA ++ M+ GI P +
Sbjct: 663 MIEK-GFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEV 707
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 5/269 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-- 175
I Y + I+ A + FEEM + + V ++++ S+ +KR F F ++
Sbjct: 294 IQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMIS---WSRRLGNMKRAFALFDEMSQ 350
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
I PN+ TY +I C++G + +L EM+ K + N F + G+ + K ++
Sbjct: 351 RDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDE 410
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ +MEK GI + V YNI LCKL R +EAK +L+ M+ +G+KPN+ T+ I
Sbjct: 411 ALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIE 470
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ KEGNL A++LF M G P+ + C+ + + A K+ + KG +P
Sbjct: 471 IYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLP 530
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMK 384
T SL+ G + +V EA +L M+
Sbjct: 531 DLYTYSSLIHGECIVGRVDEALKLFNEMR 559
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 105/248 (42%), Gaps = 18/248 (7%)
Query: 118 IVLYGQANMIDHAMQTFEE-MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
++L Q+ +D + F MD Y R +D AL L I+ K
Sbjct: 379 LLLEMQSKGVDLNLVIFNTTMDGYCRRGKMD--EALRLQAIMEKK--------------- 421
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI + TYN + C+ IL M K ++PN F + + + KE +
Sbjct: 422 GINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEA 481
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + MEK G + YN I + CK ++ ++A + M+++G+ P+L TY LIHG
Sbjct: 482 ERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHG 541
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G ++ A KLF M G + + L + G + A K+ M G +P
Sbjct: 542 ECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPD 601
Query: 357 FSTMKSLV 364
SLV
Sbjct: 602 DRVFTSLV 609
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 5/263 (1%)
Query: 127 IDHAMQTFEEM---DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+D ++ F M +K+ +R V +L ++ E+ K + E ++PN
Sbjct: 196 VDFCVRFFHRMVESNKFEIR--VQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVF 253
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN ++ ++ D V IL M ++ + + + +L+ + E+ K+ + M
Sbjct: 254 TYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEM 313
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ I V VY+ I +L + A AL D M R I PN TY LI G K G +
Sbjct: 314 REKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQM 373
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A+ L M + G + + F C+ G+ + AL++ KG T L
Sbjct: 374 EAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNIL 433
Query: 364 VTGLASISKVAEANELIGLMKKR 386
GL + + EA ++ M ++
Sbjct: 434 ANGLCKLHRYDEAKCILNSMVEK 456
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 137/338 (40%), Gaps = 21/338 (6%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR--------QNERFHVHS 117
SL P D A I +S+L +A F + +L L T D+ + F H
Sbjct: 88 SLKP----DLKAHLILISRLFEARKFATMKSILNGLVTDSDIECPVSSIVDLVDEFESHF 143
Query: 118 IVLY--------GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+ + + D ++ ++ +++ GL + LLL + R F
Sbjct: 144 VEKFCDMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFF 203
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI-RPNATDFGLLLAGFY 228
+ E ++ VI C G+ ++ EM K I +PN + LL +
Sbjct: 204 HRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYV 263
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
+ V ++L++MEK + V Y+I IQ EEA+ + + M + I+ ++
Sbjct: 264 GRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVY 323
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
Y +I + GN++ A LF M+ P+++ + +C+ G+ E A +
Sbjct: 324 VYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEM 383
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+KG + + + G K+ EA L +M+K+
Sbjct: 384 QSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKK 421
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 8/264 (3%)
Query: 127 IDHAMQTFEEMDKYGL-RQSVDALNALL---LGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
++ A + +EM G+ + +V N LL +G K +E+ ++ + V+ +
Sbjct: 232 VEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVA--- 288
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ +I+ + SGD I EMR K+I + + +++ + + +
Sbjct: 289 -TYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDE 347
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + I + Y I +CK + E A+ LL M S+G+ NL + + G+ + G
Sbjct: 348 MSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGK 407
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A +L A M G D + + + LC+ Y+ A + + + KG P+ T
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTM 467
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
+ +AEA L M+K+
Sbjct: 468 FIEIYCKEGNLAEAERLFRDMEKK 491
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A M + G++ +V + N E +R+F + K G PN TYN
Sbjct: 444 DEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEK-KGEVPNIITYNT 502
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I ++C+ + I +EM K + P+ + L+ G + ++ K+ M G
Sbjct: 503 LIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKG 562
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
I V Y I L K R++EA L D M+ G+ P+ + L+ F K
Sbjct: 563 ITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 4/285 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ +S L + ++L+++ +R D N + I + N +D A +
Sbjct: 342 DIYTYNSLISGLCKLGEIEEAVKILDQMVSR-DCSPNAVTYNAIISSLCKENRVDEATEI 400
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ G+ V N+L+ G LS N++ +F E K G P+ TYN +I S C
Sbjct: 401 ARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM-KGKGCRPDEFTYNMLIDSLC 459
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
S ++L EM N + L+ GF K + E+ ++ ME G++
Sbjct: 460 SSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSV 519
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I LCK KR E+A L+D M+ G++P+ TY L+ F K G+++ A + +M
Sbjct: 520 TYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTM 579
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV--PH 356
T+ GC PD + LC+ G + A ++ R+ KG V PH
Sbjct: 580 TSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPH 624
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 4/217 (1%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E+ R+ T GI P+ T+N +I+ C S + S + EM+ K RP+ + +L
Sbjct: 399 EIARLLTS----KGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNML 454
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ K E+ +L+ ME G A V +YN I CK KR EEA+ + D M +G+
Sbjct: 455 IDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+ TY LI G K +E A +L M G PD + + C+ G+ + A
Sbjct: 515 SRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAAD 574
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + G P T +L++GL +V A+ L+
Sbjct: 575 IVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 2/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D F+I + L +A+ ++EE+ + L +E + Y + +D A++
Sbjct: 202 DVSTFNILIKALCKAHQVRPAILMMEEMPSY-GLSPDETTFTTIMQGYIEGGNLDGALRI 260
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M +YG + +N L+ G ++ F + G P+ TYN ++ C
Sbjct: 261 KEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS-FIQEAVSEGFRPDQFTYNTLVNGLC 319
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + ++ M + P+ + L++G K + E+ K+L M +
Sbjct: 320 KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 379
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I SLCK R +EA + + S+GI P++ T+ LI G N + A LF M
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC PD + + M LC + E AL + + G + +L+ G ++
Sbjct: 440 KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRI 499
Query: 374 AEANELIGLMK 384
EA E+ M+
Sbjct: 500 EEAEEIFDEME 510
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 155/342 (45%), Gaps = 3/342 (0%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
I L+ +++ L + AS P + + KL +A F + ++LEE+K
Sbjct: 68 IETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSG 127
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEE 164
F + + YG+ + D + + M D+Y ++ N LL + + +
Sbjct: 128 CEFDRGIFLIF-VESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKL 186
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
V+ + + I + T+N +IK+ C++ ++ EM + P+ T F ++
Sbjct: 187 VESAHSSMVR-RRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIM 245
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G+ + + ++ + M + G N+ I CK R ++A + + +S G +
Sbjct: 246 QGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFR 305
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ TY L++G K G+ + A ++ +M GG +PD Y + LC+ GE E A+K+
Sbjct: 306 PDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKI 365
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+++ P+ T ++++ L ++V EA E+ L+ +
Sbjct: 366 LDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 3/299 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D F+ + L +++ + L EE+K + R +E + I + ++ A+
Sbjct: 412 DVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK-GCRPDEFTYNMLIDSLCSSRKLEEALNL 470
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM+ G ++V N L+ G +K EE + IF E ++ G+ +S TYN +I C
Sbjct: 471 LKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM-ELQGVSRDSVTYNTLIDGLC 529
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S ++ +M + +RP+ + LL F K + ++Q M G +
Sbjct: 530 KSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIV 589
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I LCK R + A LL + +G+ Y +I K A +LF M
Sbjct: 590 TYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649
Query: 314 TNGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ PD+ + + LC GG A+ + +G +P FS+ L GL ++S
Sbjct: 650 LDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLS 708
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 22/289 (7%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CIL--SKNYEEVKRIFTEFPKVYGIEPNSE 183
ID A+ +E G R N L+ G C + +K+ EV + + G++P+
Sbjct: 289 IDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEV----VDAMLLGGLDPDIY 344
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +I C+ G+ IL +M + PNA + +++ KE++ ++ ++ +++
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
GI V +N IQ LC + A L + M +G +P+ TY LI L
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A L M GC + + C+ E A ++ +G T +L
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524
Query: 364 VTGLASISKVAEANELI------GLMKKRFP---------KSGDMWNAA 397
+ GL +V +A +L+ GL +F K+GD+ AA
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAA 573
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A +EM L+ +V L+ G + N +E ++ E G++PN TY+
Sbjct: 331 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA-GVQPNKITYDN 389
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++ C+ G +L +M R S RP+ + L++ G ++ H +D ++L ME G
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 449
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ V Y+I I LC+ E+A LL+ M ++G+KPN Y LI G+ +EGN+ A
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F MT PD YC+ + L + G E + K +G +P+ T L+ G
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 569
Query: 368 ASISKVAEANELIGLMKKRFPKSGDM 393
+ A +L+ M K D+
Sbjct: 570 LKNGDLESAEQLVQRMLDTGLKPNDV 595
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 147/329 (44%), Gaps = 6/329 (1%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
R S+ + FR+L A ++P + +SI + L Q+ S LLEE+ T+ L
Sbjct: 431 RHHSKKDAFRLLSEMENAGISP----NVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GL 485
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
+ N + I Y + + A + F++M K + + N+L+ G EE +
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F + + G+ PN TY+ +I + ++GD S ++ M ++PN + LL +
Sbjct: 546 YFAQMQE-RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+K E V + M G+ +Y I I +L E A +L G+ G P++
Sbjct: 605 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 664
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
Y LI G K + E A + M+ G +P+ C+ LC+ G+ A V +
Sbjct: 665 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 724
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+AKG VP+ T SL+ G + ++ A
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNA 753
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + D A + EM + G + N L+ G S EE F + + YG+ P
Sbjct: 254 YCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDMEDYGLVP 312
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I C+S S+ ++L EM ++PN + L+ GF +E ++ K++
Sbjct: 313 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 372
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M G+ Y+ ++ LCK+ + + A LL M+ +P+ TY +I G +
Sbjct: 373 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 432
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+ + A +L + M N G P+ Y + + + LCQ GE E A + KG P+
Sbjct: 433 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 492
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
L++G V+ A E+ M K
Sbjct: 493 APLISGYCREGNVSLACEIFDKMTK 517
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 1/246 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ + A + M G+ S+ NALL + + + ++ EF GI P
Sbjct: 184 YKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV-REFMVGAGISP 242
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ +I+++C+ + + +L EMR + N + +L+AG + E+
Sbjct: 243 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 302
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME G+ Y I LCK +RS EAKALLD M +KPN+ Y +LI GF +E
Sbjct: 303 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 362
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN + A K+ M G +P+ + LC+ G+ + A + + + P T
Sbjct: 363 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITY 422
Query: 361 KSLVTG 366
++ G
Sbjct: 423 NLIIEG 428
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 125/301 (41%), Gaps = 39/301 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A ++M + R N ++ G + ++ R+ +E GI PN TY+
Sbjct: 400 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA-GISPNVYTYS 458
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+SG+ +L EM K ++PNA + L++G+ +E ++ M K
Sbjct: 459 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 518
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YN I L K+ R EE+ M RG+ PN TY LIHG+ K G+LE A
Sbjct: 519 NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 578
Query: 307 KKLFASMTNGGCEPDS--YCFFMFTYF--------------------------------- 331
++L M + G +P+ Y + +YF
Sbjct: 579 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHN 638
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
L G E A +V G VP SL++GL K A+ + G++ + K
Sbjct: 639 LSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC---KTADREKAFGILDEMSKKGV 695
Query: 392 D 392
D
Sbjct: 696 D 696
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 149/352 (42%), Gaps = 36/352 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + LS+ ++ +++ R L NE + I Y + ++ A Q
Sbjct: 523 DLYCYNSLIFGLSKVGRVEESTKYFAQMQER-GLLPNEFTYSGLIHGYLKNGDLESAEQL 581
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ M GL+ + LL S + E+V F G+ ++ Y +I +
Sbjct: 582 VQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD-QGVMLDNRIYGILIHNLS 640
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
SG+ + + +L+ + + P+ + L++G K E +L M K G+ +
Sbjct: 641 SSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIV 700
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I LCK A+ + + +L++G+ PN TY LI G K G++ A L+ M
Sbjct: 701 CYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEM 760
Query: 314 TNGGCEPDSYCFFMFT------------YFL----------------------CQGGEYE 339
G PD++ + + T FL C+ G+ +
Sbjct: 761 LATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQ 820
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
LK+ M +G VP+ T++++++GL+ K++E + + ++++ +S
Sbjct: 821 ETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESA 872
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 144/338 (42%), Gaps = 33/338 (9%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLL---EELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
LD + I + LS + + A ++L E+ + PD+ HV+S ++ G D
Sbjct: 627 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV------HVYSSLISGLCKTADR 680
Query: 130 --AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A +EM K G+ ++ NAL+ G S + + +F G+ PN TY
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI-LAKGLVPNCVTYTS 739
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ GD S+ + + EM I P+A + +L G E +++ M G
Sbjct: 740 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL---- 303
AS ++ +N + CK + +E LL ++ RG+ PN T +++I G + G L
Sbjct: 800 HAS-ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 858
Query: 304 -----------EGAKK----LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
E A + LF M N G P M C+ G + AL +
Sbjct: 859 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVI 917
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+AK S+ ++V L K++EA L+ M KR
Sbjct: 918 VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 955
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+S++ L++ +S P D +L+ + K + +D +V+ MM G+A + N
Sbjct: 160 ASIHRALSDSGHRS--PAVLD--VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNAL 215
Query: 259 IQSLCKLKRSEEAKALL----DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
++ L + +A ALL + M+ GI P++ TY LI + K + AKK+ M
Sbjct: 216 LKDLLR----ADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR 271
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC ++ + + LC+ G E A + G VP T +L+ GL +
Sbjct: 272 ERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSN 331
Query: 375 EANELIGLM 383
EA L+ M
Sbjct: 332 EAKALLDEM 340
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 35/233 (15%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ ++ +SG ++ MR + + P+ LL + + KV + M G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ V Y+ I++ CK++ + AK +L M RG N TY LI G + G +E A
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQG-------------------------------- 335
M + G PD + + LC+
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359
Query: 336 ---GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G + A K+ + +A G P+ T +LV GL + ++ A+ L+ M +
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 412
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTE 171
V+S++ G A ++ AM EEM G S+ + N L+ G C K E +K +
Sbjct: 771 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 829
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ G+ PN+ T +I E+G S V++I E+++K+ A F L +
Sbjct: 830 MGR--GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG 887
Query: 232 KYE---------------DVGKVLQMMEKCGIAS---GVNVYNIRIQSLCKLKRSEEAKA 273
K ++ K L + + S G + Y + +LC+ + EA
Sbjct: 888 KIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALN 947
Query: 274 LLDGMLSRGIKPN 286
LL M RGI P+
Sbjct: 948 LLKEMDKRGICPS 960
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%), Gaps = 1/300 (0%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ KLS+A F + LL +L + ++ E ++ I YG A D A++TF + +
Sbjct: 102 IHKLSRARVFGPVELLLSDLH-KSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFN 160
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+++SV +LN LL + +K Y+ V +F YG+ PN T N +IK+ C+ D S
Sbjct: 161 VQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESA 220
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+L EM + PN + +L G+ + KV + G Y I +
Sbjct: 221 VKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNG 280
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
C+ R +A L+D M G++PN TY ++ + KE A+ L M P
Sbjct: 281 YCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPS 340
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
S LC+ G+ E A ++ + + K +P + M +L+ L KV EA +L G
Sbjct: 341 SALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFG 400
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 1/175 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+S KVI CE+G + M +K+ P+ L+ KE K + K+
Sbjct: 339 PSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKL 398
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
E+ I S + YN I +C+ EA L D M+ +G KPN TY LI GF K
Sbjct: 399 FGEFERGAIPSLL-TYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSK 457
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
GN + ++ M + C P+ + + LC+ G KV +MA G V
Sbjct: 458 IGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMASGGV 512
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 127/312 (40%), Gaps = 39/312 (12%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPN 181
+ N ++ A++ +EM G+ +V +L G + ++F E F + G P+
Sbjct: 213 KKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDR--GWLPD 270
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY ++ +CE G + ++ +M + PN +G+++ + KE K + +L
Sbjct: 271 ATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLD 330
Query: 242 -MMEKCGIASGV----------------------------------NVYNIRIQSLCKLK 266
M+E+ + S + + I LCK
Sbjct: 331 DMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEG 390
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ EA+ L G RG P+L TY LI G ++G L A KL+ M G +P+++ +
Sbjct: 391 KVWEARKLF-GEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYN 449
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
M + G + +++ + +P+ ST L+ L + E ++++ +
Sbjct: 450 MLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSMAMAS 509
Query: 387 FPKSGDMWNAAL 398
D W+ L
Sbjct: 510 GGVDSDSWDLFL 521
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 4/263 (1%)
Query: 127 IDHAMQTFEEMDKY--GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+D A+Q FE KY + D ++++ ++ + V+ + ++ K I+
Sbjct: 74 LDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQ-IKCGENI 132
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ-MM 243
+ VI+++ +G ++ +++ + LL F + +Y+ V + +
Sbjct: 133 FINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCR 192
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
K G+ V NI I++LCK E A +LD M + G+ PN+ TY ++ G+ G++
Sbjct: 193 SKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDM 252
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A K+F + + G PD+ + + C+ G A+K+ G P+ T +
Sbjct: 253 VNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVM 312
Query: 364 VTGLASISKVAEANELIGLMKKR 386
V K EA L+ M +R
Sbjct: 313 VEAYCKEKKAGEARNLLDDMLER 335
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A +EM L+ +V L+ G + N +E ++ E G++PN TY+
Sbjct: 309 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA-GVQPNKITYDN 367
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++ C+ G +L +M R S RP+ + L++ G ++ H +D ++L ME G
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 427
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ V Y+I I LC+ E+A LL+ M ++G+KPN Y LI G+ +EGN+ A
Sbjct: 428 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 487
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F MT PD YC+ + L + G E + K +G +P+ T L+ G
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 547
Query: 368 ASISKVAEANELIGLMKKRFPKSGDM 393
+ A +L+ M K D+
Sbjct: 548 LKNGDLESAEQLVQRMLDTGLKPNDV 573
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 147/329 (44%), Gaps = 6/329 (1%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
R S+ + FR+L A ++P + +SI + L Q+ S LLEE+ T+ L
Sbjct: 409 RHHSKKDAFRLLSEMENAGISP----NVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GL 463
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
+ N + I Y + + A + F++M K + + N+L+ G EE +
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 523
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F + + G+ PN TY+ +I + ++GD S ++ M ++PN + LL +
Sbjct: 524 YFAQMQE-RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 582
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+K E V + M G+ +Y I I +L E A +L G+ G P++
Sbjct: 583 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 642
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
Y LI G K + E A + M+ G +P+ C+ LC+ G+ A V +
Sbjct: 643 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 702
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+AKG VP+ T SL+ G + ++ A
Sbjct: 703 ILAKGLVPNCVTYTSLIDGSCKVGDISNA 731
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 1/272 (0%)
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
H ++ Y + D A + EM + G + N L+ G S EE F +
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDM 283
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ YG+ P+ TY +I C+S S+ ++L EM ++PN + L+ GF +E
Sbjct: 284 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 343
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ K+++ M G+ Y+ ++ LCK+ + + A LL M+ +P+ TY +
Sbjct: 344 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 403
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G + + + A +L + M N G P+ Y + + + LCQ GE E A + KG
Sbjct: 404 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 463
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ L++G V+ A E+ M K
Sbjct: 464 KPNAFVYAPLISGYCREGNVSLACEIFDKMTK 495
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 125/301 (41%), Gaps = 39/301 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A ++M + R N ++ G + ++ R+ +E GI PN TY+
Sbjct: 378 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA-GISPNVYTYS 436
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+SG+ +L EM K ++PNA + L++G+ +E ++ M K
Sbjct: 437 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 496
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YN I L K+ R EE+ M RG+ PN TY LIHG+ K G+LE A
Sbjct: 497 NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 556
Query: 307 KKLFASMTNGGCEPDS--YCFFMFTYF--------------------------------- 331
++L M + G +P+ Y + +YF
Sbjct: 557 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHN 616
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
L G E A +V G VP SL++GL K A+ + G++ + K
Sbjct: 617 LSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLC---KTADREKAFGILDEMSKKGV 673
Query: 392 D 392
D
Sbjct: 674 D 674
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 129/298 (43%), Gaps = 35/298 (11%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A Q + M GL+ + LL S + E+V F G+ ++ Y
Sbjct: 553 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD-QGVMLDNRIYG 611
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + SG+ + + +L+ + + P+ + L++G K E +L M K
Sbjct: 612 ILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 671
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + YN I LCK A+ + + +L++G+ PN TY LI G K G++ A
Sbjct: 672 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 731
Query: 307 KKLFASMTNGGCEPDSYCFFMFT------------YFL---------------------- 332
L+ M G PD++ + + T FL
Sbjct: 732 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGF 791
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
C+ G+ + LK+ M +G VP+ T++++++GL+ K++E + + ++++ +S
Sbjct: 792 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSES 849
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 144/338 (42%), Gaps = 33/338 (9%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLL---EELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
LD + I + LS + + A ++L E+ + PD+ HV+S ++ G D
Sbjct: 605 LDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV------HVYSSLISGLCKTADR 658
Query: 130 --AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A +EM K G+ ++ NAL+ G S + + +F G+ PN TY
Sbjct: 659 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI-LAKGLVPNCVTYTS 717
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ GD S+ + + EM I P+A + +L G E +++ M G
Sbjct: 718 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL---- 303
AS ++ +N + CK + +E LL ++ RG+ PN T +++I G + G L
Sbjct: 778 HAS-ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 836
Query: 304 -----------EGAKK----LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
E A + LF M N G P M C+ G + AL +
Sbjct: 837 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVI 895
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+AK S+ ++V L K++EA L+ M KR
Sbjct: 896 VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 933
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 25/195 (12%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTE 171
V+S++ G A ++ AM EEM G S+ + N L+ G C K E +K +
Sbjct: 749 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 807
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ G+ PN+ T +I E+G S V++I E+++K+ A F L +
Sbjct: 808 MGR--GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG 865
Query: 232 KYE---------------DVGKVLQMMEKCGIAS---GVNVYNIRIQSLCKLKRSEEAKA 273
K ++ K L + + S G + Y + +LC+ + EA
Sbjct: 866 KIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALN 925
Query: 274 LLDGMLSRG-IKPNL 287
LL M RG ++P L
Sbjct: 926 LLKEMDKRGNLQPTL 940
>gi|242067098|ref|XP_002454838.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
gi|241934669|gb|EES07814.1| hypothetical protein SORBIDRAFT_04g038280 [Sorghum bicolor]
Length = 419
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 149/325 (45%), Gaps = 20/325 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEE-LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
DR F+++V +L+ A + ++ +L L P +E F + I LY A M DH++
Sbjct: 76 DRPLFALSVHRLASAGRRDLVASVLSSSLTALPSPHPSEGFLLRLISLYSAAGMPDHSLT 135
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F ++ R AL+ALL ++ Y+ R F P GI+P ++N ++K+
Sbjct: 136 VFRLVNPPSDR----ALSALLSTYHDNRLYDRAVRAFNTLPAELGIKPGLVSHNVLLKAL 191
Query: 193 CESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG---- 247
SGD ++ S +M + ++P+ +L G+ D Q++++
Sbjct: 192 VASGDIAAARSAFDKMPDTAGVQPDIVSCNEILKGYLSTG---DDAAFDQLVKEIAGPNR 248
Query: 248 -IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ V YN+R+ LC +RS EA+ LLD M + G+ PN ++ +I G EG + A
Sbjct: 249 RLKPNVGTYNLRMAMLCSKERSFEAEELLDAMGANGVPPNRASFNTVIKGLCNEGEVGAA 308
Query: 307 KKLFASMT------NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
LF M G P+ + M L ++ AL+VC+ + W P F +
Sbjct: 309 MALFKRMPEVPRQKGKGVSPNFETYIMLLEALVNKNLFDPALEVCKECLHNKWAPPFQAV 368
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
K LV L K A E++ M+K
Sbjct: 369 KGLVESLLKSRKAKHAREVLMAMRK 393
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A +EM L+ +V L+ G + N +E ++ E G++PN TY+
Sbjct: 204 NEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA-GVQPNKITYDN 262
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++ C+ G +L +M R S RP+ + L++ G ++ H +D ++L ME G
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAG 322
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ V Y+I I LC+ E+A LL+ M ++G+KPN Y LI G+ +EGN+ A
Sbjct: 323 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 382
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F MT PD YC+ + L + G E + K +G +P+ T L+ G
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGY 442
Query: 368 ASISKVAEANELIGLMKKRFPKSGDM 393
+ A +L+ M K D+
Sbjct: 443 LKNGDLESAEQLVQRMLDTGLKPNDV 468
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 6/329 (1%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
R ++ + FR+L A ++P + +SI + L Q+ S LLEE+ T+ L
Sbjct: 304 RHHNKKDAFRLLSEMENAGISP----NVYTYSIMIHGLCQSGEPEKASDLLEEMTTK-GL 358
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
+ N + I Y + + A + F++M K + + N+L+ G EE +
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F + + G+ PN TY+ +I + ++GD S ++ M ++PN + LL +
Sbjct: 419 YFAQMQE-RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 477
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+K E V + M G+ +Y I I +L E A +L + G P++
Sbjct: 478 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDV 537
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
Y LI G K + E A + M+ G +P+ C+ LC+ G+ A V +
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 597
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+AKG VP+ T SL+ G + ++ A
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNA 626
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + D A + EM + G + N L+ G S EE F + + YG+ P
Sbjct: 127 YCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFG-FKKDMEDYGLVP 185
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I C+S S+ ++L EM ++PN + L+ GF +E ++ K++
Sbjct: 186 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 245
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M G+ Y+ ++ LCK+ + + A LL M+ +P+ TY +I G +
Sbjct: 246 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 305
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
N + A +L + M N G P+ Y + + + LCQ GE E A + KG P+
Sbjct: 306 HNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 365
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
L++G V+ A E+ M K
Sbjct: 366 APLISGYCREGNVSLACEIFDKMTK 390
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ + A + M GL S+ NALL + + + ++ EF GI P
Sbjct: 57 YKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKV-REFMVGAGISP 115
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ +I+++C+ + + +L EMR + N + +L+AG + E+
Sbjct: 116 DVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFK 175
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME G+ Y I LCK +RS EAKALLD M +KPN+ Y +LI GF +E
Sbjct: 176 KDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMRE 235
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GN + A K+ M G +P+ + LC+ G+ + A
Sbjct: 236 GNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRA 276
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 39/301 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A ++M + R N ++ G N ++ R+ +E GI PN TY+
Sbjct: 273 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENA-GISPNVYTYS 331
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+SG+ +L EM K ++PNA + L++G+ +E ++ M K
Sbjct: 332 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 391
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YN I L K+ R EE+ M RG+ PN TY LIHG+ K G+LE A
Sbjct: 392 NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 451
Query: 307 KKLFASMTNGGCEPDS--YCFFMFTYF--------------------------------- 331
++L M + G +P+ Y + +YF
Sbjct: 452 EQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHN 511
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
L G E A +V G VP SL++GL K A+ + G++ + K
Sbjct: 512 LSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLC---KTADREKAFGILDEMSKKGV 568
Query: 392 D 392
D
Sbjct: 569 D 569
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 130/299 (43%), Gaps = 35/299 (11%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A Q + M GL+ + LL S + E+V F G+ ++ Y
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD-QGVMLDNRIYG 506
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + SG+ + + +L+E+ + P+ + L++G K E +L M K
Sbjct: 507 ILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKK 566
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + YN I LCK A+ + + +L++G+ PN TY LI G K G++ A
Sbjct: 567 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626
Query: 307 KKLFASMTNGGCEPDSYCFFMFT------------YFL---------------------- 332
L+ M G PD++ + + T FL
Sbjct: 627 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGF 686
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
C+ G+ + LK+ M +G VP+ T++++++GL+ K++E + + ++++ +S
Sbjct: 687 CKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESA 745
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 145/338 (42%), Gaps = 33/338 (9%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMIDH 129
LD + I + LS + + A ++L E++ + PD+ HV+S ++ G D
Sbjct: 500 LDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDV------HVYSSLISGLCKTADR 553
Query: 130 --AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A +EM K G+ ++ NAL+ G S + + +F G+ PN TY
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSI-LAKGLVPNCVTYTS 612
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ GD S+ + + EM I P+A + +L G E +++ M G
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL---- 303
AS ++ +N + CK + +E LL ++ RG+ PN T +++I G + G L
Sbjct: 673 HAS-ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 731
Query: 304 -----------EGAKK----LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
E A + LF M N G P M C+ G + AL +
Sbjct: 732 TIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVI 790
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+AK S+ ++V L K++EA L+ M KR
Sbjct: 791 VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 828
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+S++ L++ +S P D +L+ + K + +D +V+ MM G+A + N
Sbjct: 33 ASIHRALSDSGHRS--PAVLD--VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNAL 88
Query: 259 IQSLCKLKRSEEAKALL----DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
++ L + +A ALL + M+ GI P++ TY LI + K + AKK+ M
Sbjct: 89 LKDLLR----ADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR 144
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC ++ + + LC+ G E A + G VP T +L+ GL +
Sbjct: 145 ERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSN 204
Query: 375 EANELIGLM 383
EA L+ M
Sbjct: 205 EAKALLDEM 213
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 35/233 (15%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ ++ +SG ++ MR + + P+ LL + + KV + M G
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ V Y+ I++ CK++ + AK +L M RG N TY LI G + G +E A
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQG-------------------------------- 335
M + G PD + + LC+
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232
Query: 336 ---GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G + A K+ + +A G P+ T +LV GL + ++ A+ L+ M +
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 285
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 25/195 (12%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTE 171
V+S++ G A ++ AM EEM G S+ + N L+ G C K E +K +
Sbjct: 644 VYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVI 702
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ G+ PN+ T +I E+G S V++I E+++K+ A F L +
Sbjct: 703 MGR--GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQG 760
Query: 232 KYE---------------DVGKVLQMMEKCGIAS---GVNVYNIRIQSLCKLKRSEEAKA 273
K ++ K L + + S G + Y + +LC+ + EA
Sbjct: 761 KIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALN 820
Query: 274 LLDGMLSRG-IKPNL 287
LL M RG ++P L
Sbjct: 821 LLKEMDKRGNLQPTL 835
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 141/303 (46%), Gaps = 1/303 (0%)
Query: 84 KLSQANHFNAISQLLEELK-TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGL 142
KLS+A F+ + L+ +L+ + P ++ E + + YG A + +M+ F + +G+
Sbjct: 92 KLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGV 151
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
++SV +LN LL I ++ ++ V +F + +GI PN T N ++K+ C+ D S Y
Sbjct: 152 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 211
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+L E+ + PN + +L G+ E +VL+ M G Y + +
Sbjct: 212 KVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGY 271
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CKL R EA ++D M I+PN TY +I KE A+ +F M PDS
Sbjct: 272 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDS 331
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
LC+ + + A + R + +P + + +L+ L +V EA +L
Sbjct: 332 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE 391
Query: 383 MKK 385
+K
Sbjct: 392 FEK 394
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 134/306 (43%), Gaps = 7/306 (2%)
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEE 136
++ V L + N + ++L+E+ P + ++ +L Y ++ A + EE
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEI---PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEE 251
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G L+ G + E + + K IEPN TY +I++ C+
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK-NEIEPNEVTYGVMIRALCKEK 310
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S ++ EM +S P+++ ++ ++HK ++ + + M K + +
Sbjct: 311 KSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLS 370
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I LCK R EA+ L D +G P+L TY LI G ++G L A +L+ M
Sbjct: 371 TLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYER 429
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
C+P+++ + + L + G + ++V + G P+ +T L GL + K +A
Sbjct: 430 KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDA 489
Query: 377 NELIGL 382
+++ +
Sbjct: 490 MKIVSM 495
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 2/234 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + A ++M+K + + ++ K E + +F E + P
Sbjct: 271 YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLE-RSFMP 329
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+S KVI + CE + +M + + P+ L+ KE + + K+
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
EK I S + YN I +C+ EA L D M R KPN TY LI G K
Sbjct: 390 DEFEKGSIPSLL-TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKN 448
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
GN++ ++ M GC P+ F + L + G+ E A+K+ ++ G V
Sbjct: 449 GNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV 502
>gi|15231886|ref|NP_188076.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274210|sp|Q9LUD6.1|PP230_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g14580, mitochondrial; Flags: Precursor
gi|9294380|dbj|BAB02390.1| unnamed protein product [Arabidopsis thaliana]
gi|119935972|gb|ABM06049.1| At3g14580 [Arabidopsis thaliana]
gi|332642020|gb|AEE75541.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 143/280 (51%), Gaps = 4/280 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+++ ++K QA ++ I +++ +K R +E F + + +YG A I+ A++
Sbjct: 98 YALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFG 157
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M +G S + N +L + +K ++E+ +IF PK+ G+E ++ N +IK CESG
Sbjct: 158 MPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKL-GVEIDACCLNILIKGLCESG 216
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ + +L E ++ RPN F L+ GF + K+E+ K+L+ MEK I +N
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG-FGKEGNLEGAKKLFASMTN 315
I I L K R EE LL+ M +G +PN TY+ +++G K+ NLE AK++ + M +
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE-AKEMMSQMIS 335
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G P + LC+ V R + G+VP
Sbjct: 336 WGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P++ F +L ++++ K+ K G+ NI I+ LC+ E A L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
LD + +PN+ T+ LI GF +G E A KL M EPD+ F + L +
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G E + + KG P+ T + ++ GL + EA E++ M
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM 333
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 3/203 (1%)
Query: 186 NKVIKSFCESGDSSSVYSILAEM-RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM-- 242
N+V+K F D S + +RK +P + + L++ F + Y+++ +V++
Sbjct: 63 NEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIK 122
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+EK S YN+ R A +L GM G P+ ++ +++
Sbjct: 123 LEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKL 182
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ K+F S G E D+ C + LC+ G E AL++ + P+ T
Sbjct: 183 FDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSP 242
Query: 363 LVTGLASISKVAEANELIGLMKK 385
L+ G + K EA +L+ M+K
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEK 265
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 141/297 (47%), Gaps = 1/297 (0%)
Query: 84 KLSQANHFNAISQLLEELK-TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGL 142
KLS+A F+ + L+ +L+ + P ++ E + + YG A + +M+ F + +G+
Sbjct: 90 KLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGV 149
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
++SV +LN LL I ++ ++ V +F + +GI PN T N ++K+ C+ D S Y
Sbjct: 150 KRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 209
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+L E+ + PN + +L G+ E +VL+ M G Y + +
Sbjct: 210 KVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGY 269
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CKL R EA ++D M I+PN TY +I KE A+ +F M + PDS
Sbjct: 270 CKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDS 329
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
LC+ + + A + R + +P + + +L+ L +V+EA +L
Sbjct: 330 SLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKL 386
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 37/295 (12%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ N I+ A + +E+ GL ++ +L G + + E KR+ E G P++
Sbjct: 201 KKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLD-RGWYPDA 259
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++ +C+ G S +++ +M + I PN +G+++ KE K + +
Sbjct: 260 ITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 319
Query: 243 M--------------------------EKCGIASGV---------NVYNIRIQSLCKLKR 267
M E CG+ + + + I LCK R
Sbjct: 320 MLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 379
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
EA+ L D +G P+L TY LI G ++G L A +L+ M C+P+++ + +
Sbjct: 380 VSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNV 438
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
L + G + ++V + G P+ +T L GL + K +A +++ +
Sbjct: 439 LIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSM 493
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 2/234 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + A ++M+K + + ++ K E + +F E P
Sbjct: 269 YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLD-RSFMP 327
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+S KVI + CE + +M + + P+ L+ KE + + K+
Sbjct: 328 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLF 387
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+K I S + YN I +C+ EA L D M R KPN TY LI G K
Sbjct: 388 DEFDKGSIPSLL-TYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKN 446
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
GN++ ++ M GC P+ F + L + G+ E A+K+ ++ G V
Sbjct: 447 GNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKV 500
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 162/348 (46%), Gaps = 37/348 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++S + KL+++ +F+A+ Q+L ++ R ++R E + I YG+A +D A+
Sbjct: 80 DYPSYSSLIYKLAKSRNFDAVDQILRLVRYR-NVRCRESLFMGLIQHYGKAGSVDKAIDV 138
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF- 192
F ++ + +++ +LN L+ + + E+ K F + K + PNS ++N +IK F
Sbjct: 139 FHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF-DGAKDMRLRPNSVSFNILIKGFL 197
Query: 193 ----------------------------------CESGDSSSVYSILAEMRRKSIRPNAT 218
C + D S+L +M +K IRPNA
Sbjct: 198 DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAV 257
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
FGLL+ G + +Y + K++ ME G G+ Y I + L K R +EAK LL M
Sbjct: 258 TFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEM 317
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
R IKP++ Y L++ E + A ++ M GC+P++ + M C+ ++
Sbjct: 318 KKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
++ L V A +A P +T +V GL + A ++ +M K+
Sbjct: 378 DSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKK 425
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 121/294 (41%), Gaps = 36/294 (12%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI---------------FTEF 172
+ A+ F + + G R + ++L+ S+N++ V +I F
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 173 PKVYG----IEPNSETYNKV---------------IKSFCESGDSSSVYSILAEMRRKSI 213
+ YG ++ + ++K+ I ++G+ S + +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
RPN+ F +L+ GF + +E KV M + + V YN I LC+ +AK+
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL+ M+ + I+PN T+ L+ G +G AKKL M GC+P + + L
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 334 QGGEYETALKVCRASMAKGWV-PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G + A K+ M K + P LV L + +V EA ++ M+ +
Sbjct: 303 KRGRIDEA-KLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 355
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 1/229 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F ++ ++ G + +Y+ +I +S + +V IL +R +++R + F
Sbjct: 63 EEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ + K + V + + N I L E+AK+ DG
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
++PN ++ LI GF + + E A K+F M +P + FLC+ + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+ + K P+ T L+ GL + EA +L+ M+ R K G
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 1/142 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+ ID A EM K ++ V N L+ E R+ TE ++ G +PN
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM-QMKGCKPN 360
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY +I FC D S ++L M P F ++AG K + VL+
Sbjct: 361 AATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLE 420
Query: 242 MMEKCGIASGVNVYNIRIQSLC 263
+M K ++ G + + LC
Sbjct: 421 VMGKKNLSFGSGAWQNLLSDLC 442
>gi|115447457|ref|NP_001047508.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|49388176|dbj|BAD25302.1| membrane-associated salt-inducible protein like [Oryza sativa
Japonica Group]
gi|113537039|dbj|BAF09422.1| Os02g0633200 [Oryza sativa Japonica Group]
gi|125540409|gb|EAY86804.1| hypothetical protein OsI_08180 [Oryza sativa Indica Group]
gi|125582977|gb|EAZ23908.1| hypothetical protein OsJ_07630 [Oryza sativa Japonica Group]
gi|215693356|dbj|BAG88738.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 455
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 131/271 (48%), Gaps = 3/271 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGI 178
Y A++ + A+ F L + L NA+L + + + V +F E K + I
Sbjct: 114 YAAASLPEKALAAFRSAAP-SLPSPISPLPFNAVLSVFLRCRRHRRVPVLFDELSKEFSI 172
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P++ +Y ++K++C + + +L +MR + P + + ++ YK+ K E +
Sbjct: 173 TPDASSYGILVKAYCMLSKDAKAHEVLDQMRGQGFTPTNSIYTTMIDSMYKQKKMEQAER 232
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ + M + G VYN +I ++E+ ++ M G+KP+ TY L+ +
Sbjct: 233 LWKQMLESGRKPDQAVYNTKIMHHSLHGKTEDVLEVIAEMEEAGVKPDTITYNFLMTSYC 292
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G +E AK+L+ S+ GC ++ + LC G+ + AL + + S VP F
Sbjct: 293 KHGKMETAKELYRSLGEKGCSANAATYKHMMAQLCAHGDLDGALVIFKESYRSNKVPDFR 352
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKRFPK 389
TM LV GL +VAEA ++ MKK+FP+
Sbjct: 353 TMSGLVEGLTKAGRVAEAKNIVAKMKKKFPE 383
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 143/311 (45%), Gaps = 2/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ + L +++ L E++ R N R H I+ Q + ID A Q
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEME-RLGCTPNRRSHNTIILGLCQQSKIDQACQV 172
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM+ + + L+ G + E ++F GI P++ TYN VI C
Sbjct: 173 FHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLD-SGITPSAVTYNVVIHGMC 231
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + MR K RP+ F +L+ K K ++ ++L+ M G V
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVV 291
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I LC + R ++A+ LL+ M+ R KP + T LIHG K G ++ A+++ +M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G PD + + C+ G+ E A ++ +A+G P+ T +LV+GL +++
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 374 AEANELIGLMK 384
EA + MK
Sbjct: 412 PEACGVFAQMK 422
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 142/323 (43%), Gaps = 17/323 (5%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMI 127
SP D ++ I + L++A N L ++L P +H + + AN
Sbjct: 7 SP-DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL-IHGLCM---ANSF 61
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALL-LGC---ILSKNYEEVKRIFTEFPKVYGIEPNSE 183
D A + F +M++ G S N ++ C +L + + +K++ + G P+
Sbjct: 62 DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED-----GHVPDVV 116
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN V+ C+S + EM R PN ++ G ++ K + +V M
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E I Y I I L K + EA L ML GI P+ TY +IHG L
Sbjct: 177 EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTL 236
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A +LF SM + GC P + F + C+ G+ + A ++ + G VP T +L
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 364 VTGLASISKVAEANELIGLMKKR 386
++GL SI++V +A L+ M KR
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKR 319
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 6/315 (1%)
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ--AN 125
A + P D ++ I + L++A N +L + + D +++V++G A
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRML---DSGITPSAVTYNVVIHGMCLAY 234
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D A++ F+ M G R S N L+ +E R+ G P+ TY
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD-DGHVPDVVTY 293
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ +I C +L +M ++ +P L+ G K + ++ +VL M
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + V YN + C+ ++E A+ LL M++RG+ PN+ TY L+ G K L
Sbjct: 354 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 413
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +FA M + GC P+ + + C G+ + LK+ + G P +L
Sbjct: 414 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 473
Query: 366 GLASISKVAEANELI 380
L + A A E++
Sbjct: 474 ELCKSGRSARALEIL 488
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+R + + + L Q + + Q+ E++ + D+ + + I +A ++ A +
Sbjct: 149 NRRSHNTIILGLCQQSKIDQACQVFHEMEAK-DIPPDSWSYGILIDGLAKAGKLNEAYKL 207
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M G+ S N ++ G L+ +E +F + G P+ T+N +I + C
Sbjct: 208 FQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAHC 266
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + +L M P+ + L++G + +D +L+ M K V
Sbjct: 267 KRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
N I LCK R +EA+ +LD M+S G P++ TY L+HG + G E A++L + M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P+ + LC+ A V + G P+ T +L+ G S +V
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446
Query: 374 AEANELIGLM 383
+L G M
Sbjct: 447 DGGLKLFGEM 456
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+S +Y +I ++G + ++ ++ + P+ + L+ G + ++D
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ M + G YN+ I + CK EEA L+ M+ G P++ TY ++ G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K +E A LF M GC P+ LCQ + + A +V AK P
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185
Query: 358 STMKSLVTGLASISKVAEANELIGLM 383
+ L+ GLA K+ EA +L M
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRM 211
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 3/189 (1%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M +++ P++ +G+L+ G K K D + Q + G+ Y I LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
++A+ L M RG P+ TY +I K G LE A L M G PD +
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK-KR 386
LC+ E AL + G P+ + +++ GL SK+ +A ++ M+ K
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 387 FPKSGDMWN 395
P D W+
Sbjct: 181 IPP--DSWS 187
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 7/213 (3%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
+SP D + ++ V +A +LL ++ R L N + + +AN +
Sbjct: 356 QSP-DVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPE 413
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F +M G ++ AL+LG + + ++F E GI P+ Y +
Sbjct: 414 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM-VCAGISPDHVVYGTLA 472
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATD---FGLLLAGFYKEHKYEDVGKVLQMMEKC 246
C+SG S+ IL E R+S+R A + + G + K E ++ M +
Sbjct: 473 AELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRG 531
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
G + LCK + EA+A+L+ ++
Sbjct: 532 GQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
>gi|413919532|gb|AFW59464.1| hypothetical protein ZEAMMB73_836837 [Zea mays]
Length = 365
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 7/293 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH---AMQTF 134
+S+ + +L+ A F+ + +LL + +T LR ++ F I +YG N+ +H AM T
Sbjct: 74 YSLMIDRLACARRFSDVEELLSKARTE-KLRFSDEFFYRLIKMYG--NVAEHPQKAMDTL 130
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
M Y S N +L + + YE V +++ P++ G+ ++ ++N ++K C+
Sbjct: 131 FAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYSSAPRL-GVTLDTCSFNILVKGLCQ 189
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G S+L EM ++ +PNAT + + + + + ++ + M K IA+ V
Sbjct: 190 YGKFDEAISLLHEMPKQGCQPNATTYSTFMHFLCQRSQVDKAFELFERMRKQDIAADTVV 249
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YNI I LC+ +R EA L M S G PN TY+ L+ G G L AK L +M+
Sbjct: 250 YNILISGLCRDERVTEAFDLFKSMTSEGCCPNSGTYQVLLDGLISLGKLFEAKSLVCTMS 309
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G P + + LC A V + + +G+VP T L+T +
Sbjct: 310 TEGVRPSFQSYKLLIDGLCSDDCVGDAHLVLKQMVGQGFVPRMGTWTKLLTSM 362
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 75/193 (38%), Gaps = 2/193 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD +F+I V L Q F+ LL E+ + + N + + Q + +D A +
Sbjct: 175 LDTCSFNILVKGLCQYGKFDEAISLLHEMP-KQGCQPNATTYSTFMHFLCQRSQVDKAFE 233
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
FE M K + N L+ G + E +F G PNS TY ++
Sbjct: 234 LFERMRKQDIAADTVVYNILISGLCRDERVTEAFDLFKSMTS-EGCCPNSGTYQVLLDGL 292
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
G S++ M + +RP+ + LL+ G + D VL+ M G +
Sbjct: 293 ISLGKLFEAKSLVCTMSTEGVRPSFQSYKLLIDGLCSDDCVGDAHLVLKQMVGQGFVPRM 352
Query: 253 NVYNIRIQSLCKL 265
+ + S+ K
Sbjct: 353 GTWTKLLTSMFKF 365
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 90/203 (44%), Gaps = 2/203 (0%)
Query: 186 NKVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N+V+K F D+S + S+ + R+ +P+ + L++ ++ DV ++L
Sbjct: 39 NEVLKVFVNIRDTSLINSVFKKACSRRDYKPSEALYSLMIDRLACARRFSDVEELLSKAR 98
Query: 245 KCGIASGVNVYNIRIQSLCKL-KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ + I+ + + ++A L M P+ T+ +++H +
Sbjct: 99 TEKLRFSDEFFYRLIKMYGNVAEHPQKAMDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQY 158
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E ++++S G D+ F + LCQ G+++ A+ + +G P+ +T +
Sbjct: 159 EVVHEVYSSAPRLGVTLDTCSFNILVKGLCQYGKFDEAISLLHEMPKQGCQPNATTYSTF 218
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ L S+V +A EL M+K+
Sbjct: 219 MHFLCQRSQVDKAFELFERMRKQ 241
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 2/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ + L ++ L E++ R N R H I+ Q + ID A Q
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEME-RLGCTPNRRSHNTIILGLCQQSKIDQACQV 172
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM+ + + L+ G + E ++F GI P++ TYN VI C
Sbjct: 173 FHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLD-SGITPSAVTYNVVIHGMC 231
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + MR K RP+ F +L+ K K ++ ++L+ M G V
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVV 291
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I LC + R ++A+ LL+ M+ R KP + T LIHG K G ++ A+++ +M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G PD + + C+ G+ E A ++ +A+G P+ T +LV+GL +++
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411
Query: 374 AEANELIGLMK 384
EA + MK
Sbjct: 412 PEACGVFAQMK 422
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 143/323 (44%), Gaps = 17/323 (5%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMI 127
SP D ++ I + L++A N L ++L P +H + + AN
Sbjct: 7 SP-DSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSL-IHGLCM---ANSF 61
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALL-LGC---ILSKNYEEVKRIFTEFPKVYGIEPNSE 183
D A + F +M++ G S N ++ C +L + + +K++ + G P+
Sbjct: 62 DDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIED-----GHVPDVV 116
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN V+ C+SG + EM R PN ++ G ++ K + +V M
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E I Y I I L K + EA L ML GI P+ TY +IHG L
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL 236
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A +LF SM + GC P + F + C+ G+ + A ++ + G VP T +L
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296
Query: 364 VTGLASISKVAEANELIGLMKKR 386
++GL SI++V +A L+ M KR
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKR 319
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 2/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+R + + + L Q + + Q+ E++ R D+ + + I +A ++ A +
Sbjct: 149 NRRSHNTIILGLCQQSKIDQACQVFHEMEAR-DIPPDSWSYGILIDGLAKAGKLNEAYKL 207
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M G+ S N ++ G L+ +E +F + G P+ T+N +I + C
Sbjct: 208 FRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM-RSKGCRPSRFTFNILIDAHC 266
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + +L M P+ + L++G + +D +L+ M K V
Sbjct: 267 KRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 326
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
N I LCK R +EA+ +LD M+S G P++ TY L+HG + G E A++L + M
Sbjct: 327 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 386
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P+ + LC+ A V + G P+ T +L+ G S +V
Sbjct: 387 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 446
Query: 374 AEANELIGLM 383
+L G M
Sbjct: 447 DGGLKLFGEM 456
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 6/315 (1%)
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ--AN 125
A + P D ++ I + L++A N +L + D +++V++G A
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRML---DSGITPSAVTYNVVIHGMCLAY 234
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D A++ F+ M G R S N L+ +E R+ G P+ TY
Sbjct: 235 TLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD-DGHVPDVVTY 293
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ +I C +L +M ++ +P L+ G K + ++ +VL M
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + V YN + C+ ++E A+ LL M++RG+ PN+ TY L+ G K L
Sbjct: 354 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 413
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +FA M + GC P+ + + C G+ + LK+ + G P +L
Sbjct: 414 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 473
Query: 366 GLASISKVAEANELI 380
L + A A E++
Sbjct: 474 ELCKSGRSARALEIL 488
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+S +Y +I ++G + + ++ + P+ + L+ G + ++D
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ M + G YN+ I + CK EEA L+ M+ G P++ TY ++ G
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G +E A LF M GC P+ LCQ + + A +V A+ P
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185
Query: 358 STMKSLVTGLASISKVAEANEL 379
+ L+ GLA K+ EA +L
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKL 207
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 3/189 (1%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M +++ P++ +G+L+ G K K D + Q + G+ Y I LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
++A+ L M RG P+ TY +I K G LE A L M G PD +
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
LC+ G E AL + G P+ + +++ GL SK+ +A ++ M+ R
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 387 FPKSGDMWN 395
P D W+
Sbjct: 181 IPP--DSWS 187
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 7/213 (3%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
+SP D + ++ V +A +LL ++ R L N + + +AN +
Sbjct: 356 QSP-DVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPE 413
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F +M G ++ AL+LG + + ++F E GI P+ Y +
Sbjct: 414 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM-VCAGISPDHVVYGTLA 472
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATD---FGLLLAGFYKEHKYEDVGKVLQMMEKC 246
C+SG S+ IL E R+S+R A + + G K E ++ M +
Sbjct: 473 AELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRG 531
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
G + LCK + EA+A+L+ ++
Sbjct: 532 GQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 140/311 (45%), Gaps = 8/311 (2%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
R+ + ++ I+D P D ++ +S + + F ++L+++ R +
Sbjct: 275 RIGNVNDALDIVDFMIEKGFDP----DVYTYNSLISGMCKLGEFEKAIEILQQMILR-EC 329
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
N + I + N I+ A + GL V N L+ G LSKN +
Sbjct: 330 SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAME 389
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F E K G +P+ TY+ +I S C +L EM NA + L+ G
Sbjct: 390 MFEEM-KNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGL 448
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K + ED ++ ME G++ YN I LCK KR EEA L+D M+ G+KP+
Sbjct: 449 CKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDK 508
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY L+ F + G++E A + +M + GCEPD + + LC+ G + A K+ R+
Sbjct: 509 FTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRS 568
Query: 348 SMAKGWV--PH 356
KG V PH
Sbjct: 569 VQMKGIVLTPH 579
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 2/312 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD F++ + L +A+ +LEE+ L+ +E + + + ++ A++
Sbjct: 156 LDVSTFNVLIKALCKAHQLRPAILMLEEMANH-GLKPDEITFTTLMQGFIEEGDLNGALK 214
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++M YG + ++ L+ G EE R E + G P+ T+N ++ F
Sbjct: 215 MKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE-EGFSPDQVTFNSLVNGF 273
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C G+ + I+ M K P+ + L++G K ++E ++LQ M +
Sbjct: 274 CRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNT 333
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I +LCK E A L ++S+G+ P++ T+ LI G N + A ++F
Sbjct: 334 VTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE 393
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M N GC+PD + + + LC + AL + + + G + +L+ GL +
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRR 453
Query: 373 VAEANELIGLMK 384
+ +A E+ M+
Sbjct: 454 IEDAEEIFDQME 465
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 98/204 (48%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ T+N +I+ C S + + EM+ K +P+ + +L+ E + ++
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L+ ME G A VYN I LCK +R E+A+ + D M G+ + TY LI G
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K +E A +L M G +PD + + + C+ G+ E A + + + G P
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T +L+ GL +V A++L+
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLL 566
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 125/297 (42%), Gaps = 1/297 (0%)
Query: 90 HFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDAL 149
+F+ I LL+ L+ + + F+ ++ + N + +M G+ V
Sbjct: 102 NFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTF 161
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ + + E +G++P+ T+ +++ F E GD + + +M
Sbjct: 162 NVLIKALCKAHQLRPAILMLEEMAN-HGLKPDEITFTTLMQGFIEEGDLNGALKMKKQML 220
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+L+ GF KE + E+ + + + + G + +N + C++
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A ++D M+ +G P++ TY LI G K G E A ++ M C P++ +
Sbjct: 281 DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ E E A + R ++KG +P T +L+ GL A E+ MK +
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 10/320 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +SI + L LL+E+++ R V++ ++ G ++ I+ A
Sbjct: 402 DEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNA---VVYNTLIDGLCKSRRIEDAE 458
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F++M+ G+ +S N L+ G +K EE ++ + + G++P+ TYN ++
Sbjct: 459 EIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQM-IMEGLKPDKFTYNSLLTY 517
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC GD I+ M P+ +G L+ G + + + K+L+ ++ GI
Sbjct: 518 FCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLT 577
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN-LEGAKKLF 310
+ YN IQ+L KR++E L M+ + P+ T+K + G G ++ A
Sbjct: 578 PHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFT 637
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G P+ F LC +T +++ M K + T S++ G I
Sbjct: 638 VEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLKI 695
Query: 371 SKVAEA-NELIGLMKKRFPK 389
K +A L G++ ++ PK
Sbjct: 696 RKFNDALANLGGILDRQNPK 715
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 36/240 (15%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P +ET ++ +S S+ ++L +++ PNAT F L+ F H+ E++ K+
Sbjct: 56 PPNET---LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKI 112
Query: 240 LQ---------------------------------MMEKCGIASGVNVYNIRIQSLCKLK 266
L+ M GI V+ +N+ I++LCK
Sbjct: 113 LENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAH 172
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ A +L+ M + G+KP+ T+ L+ GF +EG+L GA K+ M GC +
Sbjct: 173 QLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVK 232
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ C+ G E AL+ +G+ P T SLV G I V +A +++ M ++
Sbjct: 233 VLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEK 292
>gi|115440379|ref|NP_001044469.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|20804913|dbj|BAB92593.1| drought-inducible protein 1OS [Oryza sativa Japonica Group]
gi|37179506|gb|AAN05726.2| drought-inducible protein 1OS [Oryza sativa Indica Group]
gi|113534000|dbj|BAF06383.1| Os01g0785700 [Oryza sativa Japonica Group]
gi|125527974|gb|EAY76088.1| hypothetical protein OsI_04014 [Oryza sativa Indica Group]
gi|125572269|gb|EAZ13784.1| hypothetical protein OsJ_03709 [Oryza sativa Japonica Group]
gi|215704731|dbj|BAG94759.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215717015|dbj|BAG95378.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 434
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 163/359 (45%), Gaps = 17/359 (4%)
Query: 46 IARLKSESNPFRILD-ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR 104
I L E +P +++ +S P + +AVS+L+ + + +++ K
Sbjct: 64 IKGLLRERDPDKLVSGFIAASSTHPRFRARHRVYDVAVSRLATFGRLDGVEAIIDAQK-- 121
Query: 105 PDLRQN-ERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
P L + E F I LYG A+M HA TF ++ +S N+LL + + +E
Sbjct: 122 PFLETSKEGFAARLIRLYGHASMASHAAATFHDLPPQ--LKSTMTFNSLLAAYVEAGEFE 179
Query: 164 EVKRIFTEFP-KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+ F E P + P+ +YN ++++ C+ D S+ + M + I P+ F
Sbjct: 180 ALAAAFKEIPVSNPSVVPSVYSYNILLQALCKVPDLSAALDTMTLMEKSGISPDLVTFNT 239
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL GFY + KV +M+ + + YN +++ L R E+A A+++ M G
Sbjct: 240 LLNGFYNHGDMDGAEKVWEMITERNMVPDAKNYNAKLRGLVAQGRIEDAVAVVEKMEKDG 299
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
KP+ +Y LI G+ K+G LE AKKLF M G + + L + GE + AL
Sbjct: 300 PKPDTISYNELIRGYCKDGRLEEAKKLFEDMAENGYVANRGTYHTLIPCLVKAGELDYAL 359
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAALPRQ 401
K C K ++ +VT L + S+V +A +++ L WN + PR+
Sbjct: 360 KCCHEIYGKNLRVDCFVLQEVVTALVTASRVEDATKIVEL----------GWNNSYPRR 408
>gi|357131125|ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 457
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 163/347 (46%), Gaps = 8/347 (2%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDR-MAFSIAVSKLSQANHFNAISQLLEELKTR 104
I L E +P +++ AS A DR + +AVS+L+ ++I LL K R
Sbjct: 73 IKGLLRERDPEKLVSDFVAASSASARFRDRHRVYEVAVSRLASFGRQDSIETLLGAQK-R 131
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
E F I LYG+A M A TF E+ + NA+L +K ++
Sbjct: 132 FLETSKEGFATRLIGLYGRAAMPAQAAATFHELP--AQLKCTMTFNAVLTAYSRAKEFDA 189
Query: 165 VKRIFTEFPKVYG-IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+ F E P + + P+ +YN +I + C+ S+ +++ M + + P+ F L
Sbjct: 190 LATAFQEIPASHPLVVPSVYSYNILISALCQKPALSAALNVVTLMEKCGVLPDNISFNTL 249
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L GF K + +D V +MM++ + YN +++ L R E+A A+++ M G
Sbjct: 250 LNGFSKNGRVDDAEAVWEMMKERNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGP 309
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
KP+ +Y LI G+ G LE AKKL+ + C P+ + L Q GE + AL+
Sbjct: 310 KPDTVSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNKGTYETLLPRLLQAGELDCALR 369
Query: 344 VCR---ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
C +S K S ++ +VT L S+V EA +++ L +K++
Sbjct: 370 YCHELFSSNIKSCRVDCSLLQDVVTTLVEASRVDEAAKIVELGRKKY 416
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 3/271 (1%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+I+++G +AN + A Q EEM + G+ V N+L+ G S EE +++ K
Sbjct: 177 NILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVK 236
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ PN TYN +I +C++G + + ++ M + P+ F L++GF ++ K +
Sbjct: 237 -RKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKID 295
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+VL +M+K A + YN+ I LC R+ EA LL M RGI P++ TY LI
Sbjct: 296 KACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLI 355
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F + +E A ++ M G PD + L + ++ A + G +
Sbjct: 356 GIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAI 415
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ T SL+ GL ++ EA L+ +M++
Sbjct: 416 PNLFTFNSLMEGLCCSRRLDEARHLLAVMRR 446
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 122/271 (45%), Gaps = 35/271 (12%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N LL + ++ + + +IF + + N TYN +I FC++GD + +LAEM+
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 210 -------------------------------RKSIR--PNATDFGLLLAGFYKEHKYEDV 236
R+S+ P++ F +L+ G K ++ +
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEA 192
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++++ M + GI V YN I LCK R EEA+ LL+ M+ R ++PNL TY LI+G
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW-VP 355
+ K G A +L M G PD F CQ + + A +V M KG P
Sbjct: 253 YCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHL-MKKGLCAP 311
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ T L++GL + EA EL+ M R
Sbjct: 312 NLVTYNVLISGLCDAGRANEACELLSEMDGR 342
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 140/302 (46%), Gaps = 16/302 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMID 128
D + ++ + L ++ QLLE + K RP+L ++ ++YG +
Sbjct: 207 DVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV------TYNTLIYGYCKTGCTG 260
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI-EPNSETYNK 187
A Q E M + G V N+L+ G ++ + K G+ PN TYN
Sbjct: 261 LAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKK--GLCAPNLVTYNV 318
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM-EKC 246
+I C++G ++ +L+EM + I P+ + L+ F + + E ++ +M E+
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I G++ + + +L K +R +EA ALLD M G PNL T+ L+ G L+ A
Sbjct: 379 VIPDGISYCTLAV-ALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEA 437
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ L A M GC+P + + + LC+ G + A +V +++G P S+ ++V
Sbjct: 438 RHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHT 497
Query: 367 LA 368
LA
Sbjct: 498 LA 499
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A ++ A Q EM + G V ++++ + N + F E + P
Sbjct: 115 FCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVEC---AP 171
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+S +N ++ C++ S ++ EM + I P+ + L+ G K ++ E+ ++L
Sbjct: 172 DSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLL 231
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K + + YN I CK + A L++ M+ G P++ T+ LI GF ++
Sbjct: 232 ETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQK 291
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
++ A ++ M G C P+ + + LC G A ++ +G +P T
Sbjct: 292 SKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITY 351
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ ++ +A ++ LM +R
Sbjct: 352 NSLIGIFCRNFQIEQAFQIQNLMVER 377
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 1/222 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q + ID A + M K ++ N L+ G + E + +E GI P
Sbjct: 288 FCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDG-RGILP 346
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I FC + + I M + + P+ + L K ++++ +L
Sbjct: 347 DIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALL 406
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G + +N ++ LC +R +EA+ LL M G P TY+ L+ G K
Sbjct: 407 DNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA 466
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
G ++ AK++ M + G +P + L + G+ + AL
Sbjct: 467 GRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLAL 508
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 118/275 (42%), Gaps = 25/275 (9%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMID 128
D + F+ +S Q + + ++L +K P+L +++++ G A +
Sbjct: 277 DVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLV------TYNVLISGLCDAGRAN 330
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE-----EVKRIFTEFPKVYGIEPNSE 183
A + EMD G+ + N+L+ I +N++ +++ + E G+ P+
Sbjct: 331 EACELLSEMDGRGILPDIITYNSLI--GIFCRNFQIEQAFQIQNLMVE----RGVIPDGI 384
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+Y + + +S +++L M PN F L+ G + ++ +L +M
Sbjct: 385 SYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVM 444
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G + Y + + LCK R ++AK +L M+S GI+P + + ++H +EG
Sbjct: 445 RRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQ 504
Query: 304 EGAKKLFASMT---NGGCEPDSYCFFMFTYFLCQG 335
+ A F + + C+P F L +G
Sbjct: 505 DLALHYFDQVVAAESKACDPSYQKLLEFVKVLREG 539
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 163/364 (44%), Gaps = 42/364 (11%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P+ P +++ + KL++ F A+ ++L ++ + ++ E + YG+A ++
Sbjct: 61 PDYP----SYAALLYKLARCQDFGAVEEVLRYVEDK-NVHCQETIFIALFQHYGKAQLVH 115
Query: 129 HAMQTFEEMDKY-----------------------------------GLRQSVDALNALL 153
A++ F M ++ G R + A N ++
Sbjct: 116 KAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMI 175
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G + +E+ ++F E + +EP+ TYN +I C +G+ +L +M +K
Sbjct: 176 KGWLEKGEWEQASKVFDEMLE-RKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGK 234
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
RPNA F LL+ G ++ + K++ ME G V + + + L K + +EAK+
Sbjct: 235 RPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKS 294
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+L M R +KP++ TY LI+ KEG A ++ M GGCE ++ + M C
Sbjct: 295 VLHEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFC 354
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGD 392
+ G++E LKV A + G P T +SLV GL + A ++ M+KR D
Sbjct: 355 RVGDFEGGLKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEMEKRQMMFCAD 414
Query: 393 MWNA 396
W A
Sbjct: 415 DWEA 418
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ +Y ++ D +V +L + K++ T F L + K
Sbjct: 58 GFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQETIFIALFQHYGKAQLVHKA 117
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + N + L EA L D G + N + +I G
Sbjct: 118 VELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIKG 177
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ ++G E A K+F M EP + +LC+ GE + A + + KG P+
Sbjct: 178 WLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPN 237
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ G I + EA +++ M+ R
Sbjct: 238 AITFALLMEGSCLIGEHNEAKKMMFDMEYR 267
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 137/313 (43%), Gaps = 7/313 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D +++ I + L++ + ++L E+ R Q +S ++ +A +DHA
Sbjct: 79 DNVSYHILIHGLAKIGKLDESLKILSEMVMRG---QTPSMQAYSSLVRALAKARRVDHAS 135
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F+EM + G L+LG + ++ F + PK +G +PN YN ++
Sbjct: 136 SLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK-HGCQPNVPVYNVLLHG 194
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C SG ++ AEM+ S P+ + LL K + E+ K+ + M G
Sbjct: 195 LCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPN 254
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V ++ I LC+ E+A + ML G KPN TY LI G + + A++LF
Sbjct: 255 VITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFE 314
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA-SMAKGWVPHFSTMKSLVTGLASI 370
MT PD+ + C+ G + A K+ R S G P T +L+ G +
Sbjct: 315 KMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKL 374
Query: 371 SKVAEANELIGLM 383
K+ ANEL+ M
Sbjct: 375 GKLGRANELVAEM 387
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 2/279 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ ++N ++ A + ++ M + G + + + L+ G +E +I +E + G P
Sbjct: 55 FARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM-VMRGQTP 113
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ + Y+ ++++ ++ S+ EM R P+ F L+ G + K +D +
Sbjct: 114 SMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERF 173
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G V VYN+ + LC + E+A L M S P++ TY L+ K
Sbjct: 174 KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKA 233
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+E KLF +M G P+ F + LC+ GE E AL+V + + G P+ T
Sbjct: 234 RRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 293
Query: 361 KSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
+L++GL KV +A EL M + P +N+ +
Sbjct: 294 TTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 332
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I N TY+ +IKS + Y +L EM P+ F ++ GF + + E
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V Q M + G Y+I I L K+ + +E+ +L M+ RG P++ Y L+
Sbjct: 66 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K ++ A LF M GG PD F+ LCQ G+ + A + + G P+
Sbjct: 126 AKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 358 STMKSLVTGLASISKVAEANELIGLMK 384
L+ GL S ++ +AN L MK
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMK 212
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 2/265 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ + FE M G +V + L+ G + E+ +F + G +PN
Sbjct: 232 KARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA-GCKPNK 290
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY +I C + + +M + I P+A + L+AG+ K ++ K+ +
Sbjct: 291 YTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE 350
Query: 243 MEK-CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ + +N I CKL + A L+ M ++G+ + TY+ LI G +
Sbjct: 351 MSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRAT 410
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
L+ A +++ M D F LC+ G + A V A+ G VP+ T +
Sbjct: 411 KLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFR 470
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
L L + +V +A +L+ K R
Sbjct: 471 ILSESLIKLGRVEDAQKLMEPAKAR 495
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 35/242 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ +N V++ F S + + M +P+ + +L+ G K K ++
Sbjct: 40 GCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDES 99
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+L M G + Y+ +++L K +R + A +L D M+ G P+ + LI G
Sbjct: 100 LKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILG 159
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA------LK------- 343
+ G ++ A + F M GC+P+ + + + LC G+ E A +K
Sbjct: 160 LCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPD 219
Query: 344 ----------VCRAS------------MAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
VC+A A G+VP+ T +L+ GL ++ +A E+ G
Sbjct: 220 VVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFG 279
Query: 382 LM 383
M
Sbjct: 280 SM 281
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 35/196 (17%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A + A + FE+M + + A N+L+ G + +E ++++ E G++P
Sbjct: 302 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 361
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N +I FC+ G ++AEM K + ++ + +L+AG + K ++ +V +
Sbjct: 362 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQ 421
Query: 243 ME-----------------------------------KCGIASGVNVYNIRIQSLCKLKR 267
M K G + I +SL KL R
Sbjct: 422 MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGR 481
Query: 268 SEEAKALLDGMLSRGI 283
E+A+ L++ +R I
Sbjct: 482 VEDAQKLMEPAKARDI 497
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 3/293 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHAMQT 133
++F+I ++ L + N ++E++K R ++ + G+ + A
Sbjct: 164 ISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAI 223
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM G+ + N L+ G KN ++F E + G++PN TYN +I C
Sbjct: 224 LKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNR-QGVKPNVVTYNSLINGLC 282
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G + ++ +M ++PN LL GF K + G++ M K GI V
Sbjct: 283 NNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVT 342
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI I + CK + E+A AL ML +G+ P++ TY LI G ++G+LE A+ L + M
Sbjct: 343 TYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM 402
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ D + + LC GE + AL++ KG P T +++ G
Sbjct: 403 DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDG 455
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY---SILAEMRRKSIRPNATDFGLLLA 225
E KV G+ N TYN +I +C+ G +Y +IL EMR I PN F +L+
Sbjct: 185 IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
GF K+ KV M + G+ V YN I LC + EA AL D M++ +KP
Sbjct: 245 GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP 304
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N+ T+ L++GF K ++ A +LF M G P+ + + C+ E A +
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALY 364
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
R + KG P ST L+ GL + A L+ M + K+
Sbjct: 365 RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA 409
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 3/258 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM+ F EM++ G++ +V N+L+ G + E + + ++PN T+N
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC-LKPNIITHN 310
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC++ + +M ++ I PN T + +L+ + K+ ED + ++M
Sbjct: 311 ALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGK 370
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V+ YN I LC+ E A+ L+ M ++ +K +L TY LI +G ++ A
Sbjct: 371 GVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKA 430
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVT 365
+L M G +P + C+ G AL + R+ M K G + + +T L+
Sbjct: 431 LRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNL-RSQMEKVGRLANVATYNVLIK 489
Query: 366 GLASISKVAEANELIGLM 383
G K+ +AN L+ M
Sbjct: 490 GFCKKDKLEDANGLLNEM 507
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 5/215 (2%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
YG++ + + N ++ + G+ + + EM R+ I P F +++ G K K
Sbjct: 122 YGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNK 181
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKL---KRSEEAKALLDGMLSRGIKPNLDTYKH 292
G +++ M+ G+++ V YN I CK+ + +A A+L M + GI PN T+
Sbjct: 182 AGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNI 241
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI GF K+ N+ A K+FA M G +P+ + LC G+ A + R M
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL-RDQMVNS 300
Query: 353 WV-PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ P+ T +L+ G V +A EL M K+
Sbjct: 301 CLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQ 335
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 129/300 (43%), Gaps = 41/300 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAM 131
+ + F+I + + + +A ++ E+ R ++ N ++ ++ G N ++ A
Sbjct: 235 NEVTFNILIDGFCKDKNVSAAMKVFAEM-NRQGVKPN--VVTYNSLINGLCNNGKVNEAT 291
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
++M L+ ++ NALL G +K ++ +F + PK GI PN TYN +I +
Sbjct: 292 ALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPK-QGITPNVTTYNILIDA 350
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C+ + +++ M K + P+ + + L+AG ++ E ++ M+ + +
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP-------------------------- 285
+ YNI I SLC ++A LLD M +G+KP
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRS 470
Query: 286 ---------NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
N+ TY LI GF K+ LE A L M G P+ + + T + + G
Sbjct: 471 QMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ++ A + M G+ V N L+ G + E + + +E + ++
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH-LKA 409
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I S C G+ +L EM RK ++P+ + ++ G+ KE +
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
MEK G + V YN+ I+ CK + E+A LL+ ML +G+ PN TY+ + ++
Sbjct: 470 SQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEK 529
Query: 301 G---NLEG 305
G ++EG
Sbjct: 530 GFVPDIEG 537
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 142/326 (43%), Gaps = 22/326 (6%)
Query: 64 GASLAPESP------LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
GA E P L + ++ +S H + +LLE +K + +
Sbjct: 511 GADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHE--------CIPT 562
Query: 118 IVLY-------GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+V Y G+A +D A+ EM+K G SV ++L+ EE +F
Sbjct: 563 VVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFD 622
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E + G + TY+ VI C+S D + M+ + + P ++ LL+ K+
Sbjct: 623 EMVR-KGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKD 681
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K + ++ +++ + VYNI + L K R +EA L+D M ++ I P+L TY
Sbjct: 682 EKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTY 741
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
L+ G GK G LE A +F MT G EPD + L +GG+ AL + RA
Sbjct: 742 TSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK 801
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEA 376
K VP T SL+ L +V EA
Sbjct: 802 KRCVPDVVTYSSLIDSLGKEGRVEEA 827
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A D +Q M K G R S+ L +LL + N IF + K +G P++
Sbjct: 195 AQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM-KSFGCNPSTN 253
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
YN V++ + G S + ++ + I+P+A F + + F + + + + +Q M
Sbjct: 254 MYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEM 313
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
K GI GV+ + + I +L K +EA +GM + PN+ TY L++G K G L
Sbjct: 314 IKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRL 373
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A ++F M C PD+ + L + GE + A + + +G VP+ T +
Sbjct: 374 EEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIM 433
Query: 364 VTGLASISKVAEANELIGLMKKR 386
++ L + EA +L +K++
Sbjct: 434 ISVLGKAGRQPEAWQLFHDLKEQ 456
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 132/330 (40%), Gaps = 39/330 (11%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDL-------------- 107
+SL P D ++I V+ L ++N + +L++ +K + PDL
Sbjct: 697 SSLVP----DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752
Query: 108 ----------RQNERFHVHSIVLY-------GQANMIDHAMQTFEEMDKYGLRQSVDALN 150
+ E H +V Y G+ + HA+ F M K V +
Sbjct: 753 RLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYS 812
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
+L+ EE F E G PN Y+ +I SF + G + EM+R
Sbjct: 813 SLIDSLGKEGRVEEAYYFF-ENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+ PN + LL+G K + K+L+ MEK G + YNI I + K+ +E
Sbjct: 872 RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A++ M +GI P++ T+ LI GK L A +LF SM G P + +
Sbjct: 932 AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L + G+ A + KG +P T+
Sbjct: 992 ILGRAGKVHEAAMIFHEMKVKGCMPDGITI 1021
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 134/320 (41%), Gaps = 13/320 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV----LYGQANMIDHAMQ 132
+++ + +L+ A +A+ Q+L + ++ R +H + +G N + A++
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAM-----WKEGHRISMHLLTSLLRTFGSTNNVSGALE 238
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F +M +G S + N +L + Y +F + + + I+P+++T+ + SF
Sbjct: 239 IFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ-FRIQPDAQTFRIFVHSF 297
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
SG + EM + I P F +L+ K ++ K M+ + V
Sbjct: 298 NRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNV 357
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + L K R EEA + M P+ Y LI G GK G + A LF
Sbjct: 358 VTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE 417
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + G P+ + + L + G A ++ +G VP T +L+ L K
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG---K 474
Query: 373 VAEANELIGLMKKRFPKSGD 392
+ ++++ ++K+ K G+
Sbjct: 475 GGQMDKVLAIIKEMVEKGGE 494
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 3/273 (1%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
V++I++ G ++N +D A + + M + + +LL G S EE +FT+
Sbjct: 705 VYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM 764
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G EP+ Y ++ + G S I M +K P+ + L+ KE +
Sbjct: 765 TE-EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E+ + G V VY+ I S K + A L + M R PN+ TY +
Sbjct: 824 VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
L+ G K G L A+KL M GC PD + + + + G + A + KG
Sbjct: 884 LLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKG 943
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
VP T SL+ L + K+ EA EL M++
Sbjct: 944 IVPDVITFTSLIESLGKVDKLLEACELFDSMEE 976
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+Q F E+ + L N ++ G + S +E ++ K I P+ TY
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSM-KNQNILPDLFTYT 742
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ +SG +++ +M + P+ + L+ K K + + M K
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V Y+ I SL K R EEA + +S+G PN+ Y LI FGK+G ++ A
Sbjct: 803 RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M C P+ + L + G A K+ G VP T L+ G
Sbjct: 863 LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDG 922
Query: 367 LASISKVAEANELIGLMKKR 386
+ + V EA MK++
Sbjct: 923 VGKMGMVDEAESYFKRMKEK 942
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 143/347 (41%), Gaps = 34/347 (9%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D +A++ + L +A + L +E+K R L N R + I + G+A A
Sbjct: 389 SP-DAIAYNTLIDGLGKAGEADMACGLFKEMKDR-GLVPNLRTYNIMISVLGKAGRQPEA 446
Query: 131 MQTFEEMDKYGLRQSVDALNALL--LG---------------------CILSKN------ 161
Q F ++ + G V N L+ LG CI+S++
Sbjct: 447 WQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHE 506
Query: 162 --YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
E R E+P + TYN ++ +F +G +L M++ P
Sbjct: 507 GTIEGADRT-VEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT 565
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G K + ++ +L+ MEK G V Y+ + S K + EE+ +L D M+
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+G ++ TY +I+ K +++ A +F M G EP + L + + +
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
AL++ VP +V GL ++V EA +L+ MK +
Sbjct: 686 FALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ 732
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 91/226 (40%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
K+ K FT + G TY +IK + ++ +V IL M ++ R +
Sbjct: 160 KDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHL 219
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
LL F + ++ M+ G N+YN ++ L K A + +
Sbjct: 220 LTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLG 279
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
I+P+ T++ +H F + G L+ A + M G +P + F + L + G +
Sbjct: 280 QFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNID 339
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A K P+ T +LV GLA ++ EA E+ MK+
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 32/169 (18%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVL--YGQA 124
+ P + + ++ +S L++A N +LLEE++ PDL ++I++ G+
Sbjct: 873 QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV------TYNILIDGVGKM 926
Query: 125 NMIDHAMQTFEEMDKYG----------LRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
M+D A F+ M + G L +S+ ++ LL C L + EE
Sbjct: 927 GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEE---------- 976
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
G P+ TYN +I +G I EM+ K P+ G++
Sbjct: 977 -EGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 158/364 (43%), Gaps = 48/364 (13%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVL--YGQ 123
P PL +F+ +S L++ H++ + L +++ PD +I+L
Sbjct: 92 PTPPLS--SFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDC------CTLNILLNCLCN 143
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
N + + + + G + L+ G + + +FT K+ G PN+
Sbjct: 144 VNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKL-GCTPNAI 202
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKS------IRPNATDFGLLLAGFYKEHK----- 232
TY ++K C +G+ S + EM S +P + +++ K+ +
Sbjct: 203 TYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEAR 262
Query: 233 ----------------------YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+E+ ++ M G+ V +N+ I LCK + E
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 322
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
AK LL+ M+ RGI PNL TY LI GF G+L A++LF SM + GCEPD C+ +
Sbjct: 323 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 382
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
C+ + E A+K+ + G P T +L+TGL KV +A +L G+M K +
Sbjct: 383 GYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM-KVYGIP 441
Query: 391 GDMW 394
GD++
Sbjct: 442 GDLY 445
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 9/252 (3%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A FEEM G+ +V + +L+ +EE KR+F E G++PN T+N
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVN-QGVQPNVVTFNV 309
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G +L M ++ I PN + L+ GF ++ M G
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V Y + I CK + EEA L +GML G +P++ TY L+ G + G + AK
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 429
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KLF M G D Y + +F LC+ G A+++ + L+ GL
Sbjct: 430 KLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGL 489
Query: 368 ASISKVAEANEL 379
K+ A EL
Sbjct: 490 CKAGKLETAWEL 501
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 124/274 (45%), Gaps = 2/274 (0%)
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
F+V VL + +I+ A E M + G+ ++ N+L+ G L + + +F
Sbjct: 307 FNVLIDVLCKEGKVIE-AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
P G EP+ Y +I +C++ + M + RP+ +G LL G ++ K
Sbjct: 366 PS-KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
D K+ +M+ GI + +Y I + LCK EA L + + S IK +++ +
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI G K G LE A +LF + +PD + + + C+GG+ A + + G
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T +L+ G K+ + EL+ +M +R
Sbjct: 545 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 193 CESGDSSSV--YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G+ +++ + M + P + F LL+G K Y V + M GI+
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
NI + LC + R E A++ G+L RG P++ TY LI G E + A LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
M GC P++ + LC+ G ALK+
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
++ RPD++ + +L G Q + A + F M YG+ + L G
Sbjct: 402 QVGKRPDVK------TYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLC 455
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ E +F + K Y I+ + E +N +I C++G + + + ++ ++ ++P+
Sbjct: 456 KNGCLFEAMELFNKL-KSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDV 514
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ +++ F + + + Q MEK G Y I+ + K+ E+ LL
Sbjct: 515 VTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHM 574
Query: 278 MLSRGIKPNLDTYKH 292
M+ R + +++ +H
Sbjct: 575 MVQRDVSLDVNILRH 589
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 177/396 (44%), Gaps = 49/396 (12%)
Query: 24 SSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVS 83
SS+L G T RA AR + E + D+ GA AP + + ++ V+
Sbjct: 141 SSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNA----VTYNTLVA 195
Query: 84 KLSQANHFNA----ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK 139
+A + +S + EE +P+L V+ + +A ++ A + F+EM +
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM-VNGLC---KAGRMEGARKVFDEMVR 251
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
GL V + N LL G E +F+E + G+ P+ T+ +I + C++G+
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ-RGLVPDVVTFTSLIHATCKAGNLE 310
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+++A+MR + +R N F L+ GF K+ +D ++ M KCGI V YN I
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL---------- 309
CKL R + A+ L+ M ++ +KP++ TY +I G+ K GNL+ A +L
Sbjct: 371 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430
Query: 310 -----FASMTNGGCE--------------------PDSYCFFMFTYFLCQGGEYETALKV 344
++S+ G CE PD + + C+ G E AL +
Sbjct: 431 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 490
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ KG +P T L+ GL+ ++ EA+ L+
Sbjct: 491 HDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 151/358 (42%), Gaps = 54/358 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + +A + L+ +++ R LR NE I + + +D A+
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRER-GLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM K G++ SV NAL+ G C L + ++ R + ++P+ TY+ +I +
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGR--MDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G+ S + + +M +K + P+A + L+ G +E + D ++ + M + G+
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK------------- 299
Y I CK E+A +L D M+ +G+ P++ TY LI+G K
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528
Query: 300 -------------------------------------EGNLEGAKKLFASMTNGGCEPDS 322
+G ++ A K++ SM + + D
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + C+GG AL + + G+ P+ ++ SLV GL V EA+ I
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 99/246 (40%), Gaps = 36/246 (14%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G SV A NA+LL LS R F +G+ PN TYN ++++ C G
Sbjct: 113 GYAPSVPAYNAVLLA--LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEE 170
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ +MR PNA + L+A F + + + +V+ +M
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR---------------- 214
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
EE A KPNL T+ +++G K G +EGA+K+F M G P
Sbjct: 215 --------EEGNA----------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D + C+ G +L V +G VP T SL+ + +A L+
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 381 GLMKKR 386
M++R
Sbjct: 317 AQMRER 322
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +M G + N L+ + + +R+ + + +PN T+N
Sbjct: 168 LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFN 227
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G + EM R+ + P+ + LL+G+ K + V M +
Sbjct: 228 SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 287
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V + I + CK E+A AL+ M RG++ N T+ LI GF K+G L+ A
Sbjct: 288 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +P C+ C+ G + A ++ R AK P T ++++G
Sbjct: 348 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 407
Query: 367 LASISKVAEANELIGLMKKR 386
+ + A +L M K+
Sbjct: 408 YCKVGNLDSAFQLNQKMLKK 427
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 177/396 (44%), Gaps = 49/396 (12%)
Query: 24 SSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVS 83
SS+L G T RA AR + E + D+ GA AP + + ++ V+
Sbjct: 141 SSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMR-GAGCAPNA----VTYNTLVA 195
Query: 84 KLSQANHFNA----ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK 139
+A + +S + EE +P+L V+ + +A ++ A + F+EM +
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM-VNGLC---KAGRMEGARKVFDEMVR 251
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
GL V + N LL G E +F+E + G+ P+ T+ +I + C++G+
Sbjct: 252 EGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ-RGLVPDVVTFTSLIHATCKAGNLE 310
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+++A+MR + +R N F L+ GF K+ +D ++ M KCGI V YN I
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL---------- 309
CKL R + A+ L+ M ++ +KP++ TY +I G+ K GNL+ A +L
Sbjct: 371 NGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVL 430
Query: 310 -----FASMTNGGCE--------------------PDSYCFFMFTYFLCQGGEYETALKV 344
++S+ G CE PD + + C+ G E AL +
Sbjct: 431 PDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSL 490
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ KG +P T L+ GL+ ++ EA+ L+
Sbjct: 491 HDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 151/358 (42%), Gaps = 54/358 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + +A + L+ +++ R LR NE I + + +D A+
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRER-GLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM K G++ SV NAL+ G C L + ++ R + ++P+ TY+ +I +
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGR--MDLARELIREMEAKRVKPDVVTYSTIISGY 408
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G+ S + + +M +K + P+A + L+ G +E + D ++ + M + G+
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 468
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK------------- 299
Y I CK E+A +L D M+ +G+ P++ TY LI+G K
Sbjct: 469 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 528
Query: 300 -------------------------------------EGNLEGAKKLFASMTNGGCEPDS 322
+G ++ A K++ SM + + D
Sbjct: 529 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 588
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + C+GG AL + + G+ P+ ++ SLV GL V EA+ I
Sbjct: 589 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 646
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +M G + N L+ + + +R+ + + +PN T+N
Sbjct: 168 LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFN 227
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G + EM R+ + P+ + LL+G+ K + V M +
Sbjct: 228 SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 287
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V + I + CK E+A AL+ M RG++ N T+ LI GF K+G L+ A
Sbjct: 288 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +P C+ C+ G + A ++ R AK P T ++++G
Sbjct: 348 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 407
Query: 367 LASISKVAEANELIGLMKKR 386
+ + A +L M K+
Sbjct: 408 YCKVGNLDSAFQLNQKMLKK 427
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 99/246 (40%), Gaps = 36/246 (14%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G SV A NA+LL LS R F +G+ PN TYN ++++ C G
Sbjct: 113 GYAPSVPAYNAVLLA--LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEE 170
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ +MR PNA + L+A F + + + +V+ +M
Sbjct: 171 AVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR---------------- 214
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
EE A KPNL T+ +++G K G +EGA+K+F M G P
Sbjct: 215 --------EEGNA----------KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D + C+ G +L V +G VP T SL+ + +A L+
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 381 GLMKKR 386
M++R
Sbjct: 317 AQMRER 322
>gi|225435096|ref|XP_002281474.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Vitis vinifera]
Length = 501
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 37/348 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++S V KL+++ +F A+ LL+ L+ ++R E + I YG++ M + A++
Sbjct: 121 DYPSYSALVYKLARSRNFEAVETLLDYLQN-INIRCRETLFIALIQHYGKSQMPEKAVEL 179
Query: 134 FEEM-----------------------------------DKYGLRQSVDALNALLLGCIL 158
F+ M K G R++ + N ++ G +
Sbjct: 180 FQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWLG 239
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
+++ ++F E ++P T+N +I C GD +L +M +K RPNA
Sbjct: 240 KGEWDKAWQVFEEMID-KEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAV 298
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ LL+ G KY++ K++ M+ G + + + + L + R +++K LL M
Sbjct: 299 TYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEM 358
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
R KP++ TY LI+ KEG A K+ M GGCEP++ + M CQ ++
Sbjct: 359 KRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDF 418
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
E LKV A + G P + LV GL K+ A ++ M+KR
Sbjct: 419 EGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKR 466
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ F + + G + + +AL+ S+N+E V+ + ++ + I +
Sbjct: 104 DDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLL-DYLQNINIRCRETLFIA 162
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+ + +S + M + F LL + ++ D + K G
Sbjct: 163 LIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMG 222
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+NI I+ ++A + + M+ + +KP + T+ LI +G+L+GA
Sbjct: 223 FRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAM 282
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M P++ + + LC G+Y+ A K+ +G P L++ L
Sbjct: 283 GLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDL 342
Query: 368 ASISKVAEANELIGLMKKR 386
++ ++ L+ MK+R
Sbjct: 343 GRRGRIDDSKTLLLEMKRR 361
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 1/146 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+ ID + EM + + V N L+ E ++ E +V G EPN
Sbjct: 343 GRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEM-QVGGCEPN 401
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY ++ FC+ D +L+ M P F L+ G K K + VL+
Sbjct: 402 AATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLE 461
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKR 267
MEK + + + ++ C R
Sbjct: 462 EMEKRKMRFHLEAWEALVKDACPGDR 487
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+ ++I+ G +A ++ A TFEEM K GL+ +A +AL+ G + + +EV RI +
Sbjct: 210 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KD 268
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
GI N TYN +I C+ G IL M +PN+ F LL+ G+ +EH
Sbjct: 269 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 328
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++L MEK + Y I LC K A LL+ M G+KPN+ Y
Sbjct: 329 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 388
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G+ EG +E A++L M+ G PD +C+ L + G+ E A +
Sbjct: 389 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 448
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G P T + + G + K+ EA
Sbjct: 449 GLKPDAVTFGAFILGYSKTGKMTEA 473
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 13/326 (3%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERF 113
R+LD + +AP D ++ +S LS+A S L E++ R PD F
Sbjct: 405 RLLDGMSCSGVAP----DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
I+ Y + + A + F+EM +GL + L+ G + N E IF
Sbjct: 461 ----ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 516
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G+ P+ +T + I ++G + +E++ K + P+ + L++GF K+ +
Sbjct: 517 AL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 575
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E ++ M GIA + +YN + LCK + A+ L DGM +G++P+ TY +
Sbjct: 576 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 635
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G+ K N+ A LF M + G +P S+ + + C+ G+ E A+ + R + KG+
Sbjct: 636 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 695
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
S +L+ G K+ EA++L
Sbjct: 696 ATTLS-FNTLIDGYCKSCKIQEASQL 720
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN+ TY + C + + EM++ ++P+ L+ GF +E ++V
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ +M CGI + YN+ I LCK + E+A +L GM++ G KPN T+ LI G
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +E N+ A +L M P + + LC + A K+ G P+
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
+L+ G AS ++ EA L+ M
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGM 410
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + E+M GL+ +V + L++G EE +R+ G+ P+ YN +I
Sbjct: 368 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM-SCSGVAPDIFCYNAII 426
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
++G + L E++ + ++P+A FG + G+ K K + K M G+
Sbjct: 427 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 486
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+Y + I K EA ++ + + G+ P++ T IHG K G ++ A K+
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 546
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F+ + G PD + + C+ GE E A ++ KG P+ +LV GL
Sbjct: 547 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 606
Query: 370 ISKVAEANELIGLMKKR 386
+ A +L M ++
Sbjct: 607 SGDIQRARKLFDGMPEK 623
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 4/272 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H + +G+ ++ A + + M G + + L+ G N + E K
Sbjct: 286 IHGLCKFGK---MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 342
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ P++ +Y +I C D S +L +M ++PN + L+ G+ E + E
Sbjct: 343 -RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 401
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ ++L M G+A + YN I L K + EEA L + RG+KP+ T+ I
Sbjct: 402 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 461
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G+ K G + A K F M + G P++ + + + G AL + R A G +
Sbjct: 462 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 521
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T + + GL +V EA ++ +K++
Sbjct: 522 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 2/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + F+ M + GL + ++ G S+N E +F E P G++P+S YN
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS-KGVQPHSFVYN 668
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+ GD ++ EM +K + F L+ G+ K K ++ ++ Q M
Sbjct: 669 ALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAK 727
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I Y I CK + EEA L M R + + TY L++G+ K G
Sbjct: 728 QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEV 787
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M G +PD + + Y C+ A K+ + KG + + L+T
Sbjct: 788 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 847
Query: 367 LASISKVAEANELIGLM 383
L + EA++L+ M
Sbjct: 848 LCKREDLTEASKLLDEM 864
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%)
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L M K + PN + ++ AG + + + + M+K G+ N + I +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+E + D M+S GI NL TY LIHG K G +E A ++ M GC+P+S
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
F + C+ AL++ + VP + +++ GL ++ AN+L+
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 372
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 121 YGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
Y ++ I A Q F+EM K + V + C K EE +F E + +
Sbjct: 708 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK-MEEANLLFKEMQE-RNLI 765
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
++ TY ++ + + G SS V+++ +M K ++P+ +GL++ KE + K+
Sbjct: 766 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 825
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ G+ + ++++ I +LCK + EA LLD M G+KP+L L+ F +
Sbjct: 826 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 885
Query: 300 EGNLEGAKKLFASMTNGGCEPDS 322
G ++ A ++F + + G PD+
Sbjct: 886 AGKMDEATRVFEGVKSLGLVPDT 908
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%)
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M + G+ Y I LC+ KR EAK + M G+KP+ + LI GF +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG+++ ++ M + G + + + + LC+ G+ E A ++ + + G P+ T
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
L+ G + A EL+ M+KR
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKR 343
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 103/241 (42%), Gaps = 6/241 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++F+ + ++ SQL +E+ + + + + I + +A ++ A F+
Sbjct: 699 LSFNTLIDGYCKSCKIQEASQLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFK 757
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFC 193
EM + L +L+ G + +F F K+ G++P+ TY VI + C
Sbjct: 758 EMQERNLIVDTVTYTSLMYG---YNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 814
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + + + E+ K + T LL+ K + K+L M + G+ +
Sbjct: 815 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 874
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+ ++S + + +EA + +G+ S G+ P+ T L++G + + E A+ L +
Sbjct: 875 ACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934
Query: 314 T 314
Sbjct: 935 V 935
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 5/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ AM FE+M K G +V N L+ G + N R+ + K G EP+ TYN
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL-DLMKENGCEPDEWTYN 482
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++ F + G S EM + PN + L+ G K+ K + +L+ ME+
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN I L K R EA+ + D M+ +G+ PN+ TY LI G + G + A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+F M C P+ Y + Y LCQ G+ + A ++ G P T +LV+G
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEI----GCEPTLDTYSTLVSG 658
Query: 367 LASISKVAEANELIGLMKKR 386
L + EA +L+ MK+R
Sbjct: 659 LCRKGRFYEAEQLVKDMKER 678
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSE 183
M++ A +++M G++ S+ N L+ ILSK E + I ++ + Y + P+
Sbjct: 178 MVEGARNLYKQMLNSGIQPSLLTFNTLI--NILSKKGKVREAELILSQIFQ-YDLSPDVF 234
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I C + + + + M ++ PN+ + L+ G E + ++ +L+ M
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ GI V Y + I +LC ++ EEA L+ M RG +PN+ TY LI G + G L
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A L+ M G P++ + LC GG + TALK+ G + + T +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414
Query: 364 VTGLASISKVAEANELIGLMKKRFP 388
+ GL + +A L M K P
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGP 439
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+Y L V +L+LG ++N + +F K G +PNS TY+ +I C G
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK-EGCDPNSVTYSTLINGLCNEGRV 284
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+L EM K I P + L + E+ +++ M+K G V Y
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 344
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I L +L + E A L ML G+ PN TY LI+ G A K+F M G
Sbjct: 345 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 404
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
++ + LC GG+ E A+ + + G +P T +L+ G + V A
Sbjct: 405 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 464
Query: 379 LIGLMKK 385
L+ LMK+
Sbjct: 465 LLDLMKE 471
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 143/334 (42%), Gaps = 10/334 (2%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N R+LD+ P D ++ VS S+ + S +E+ L N
Sbjct: 460 NNAARLLDLMKENGCEP----DEWTYNELVSGFSKWGKLESASFYFQEM-VECGLNPNPV 514
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+ I + + +D A+ + M++ G +V++ NA++ G + E ++I +
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G+ PN TY +I C +G + + I +M ++ PN + L+ G +E K
Sbjct: 575 VE-QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
++ + M + G ++ Y+ + LC+ R EA+ L+ M RG P+ + Y
Sbjct: 634 ADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 689
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
L+ K ++ A K+F S+ G + + LC+ G+ E A + + K
Sbjct: 690 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 749
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
W LV GL ++ +L+ +M+ +
Sbjct: 750 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 783
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 11/276 (3%)
Query: 116 HSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDA----LNALLLGCILSKNYEEVKRIF 169
+S ++ G N +D A+ EEM + G+ +V + AL + E V R+
Sbjct: 271 YSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM- 329
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
K G PN +TY +I G + +M ++ + PN + L+
Sbjct: 330 ----KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCV 385
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
++ K+ ME G + YN I+ LC E+A L + ML G P + T
Sbjct: 386 GGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVT 445
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y LI+G+ +GN+ A +L M GCEPD + + + G+ E+A + +
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P+ + +L+ G + KV A L+ M++
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 109/285 (38%), Gaps = 36/285 (12%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS-------------- 182
M K G R +V AL+ G E ++ + K G+ PN+
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK-EGLVPNTVTYNALINELCVGG 387
Query: 183 ---------------------ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+TYN++IK C GD + +M + P +
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ G+ + + ++L +M++ G YN + K + E A M+
Sbjct: 448 TLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G+ PN +Y LI G K+G ++ A L M GC P+ + L + + A
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
K+C + +G +P+ T +L+ GL + A ++ M+KR
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F +M+K ++ ++L+ G +E +R+ G EP +TY+ ++
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM-----SEIGCEPTLDTYSTLV 656
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C G ++ +M+ + P+ + LL K + + K+ +E G
Sbjct: 657 SGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQ 716
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+++Y I +LCK + EEA+AL D ML + + + L+ G KEG L+ KL
Sbjct: 717 LHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKL 776
Query: 310 FASMTNGGCEPD 321
M + P+
Sbjct: 777 LHIMESKNFTPN 788
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL K E + + M GI + +N I L K + EA+ +L +
Sbjct: 169 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 228
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P++ TY LI G + NL+ A +F M GC+P+S + LC G + AL
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + KG P T +T L +I EA EL+ MKKR
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 234 EDVGKVLQMM-EKCGIASGVNVY--NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
E++ +V + E G+ G ++Y N + L K + E A+ L ML+ GI+P+L T+
Sbjct: 142 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI+ K+G + A+ + + + PD + + C+ + A V +
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+G P+ T +L+ GL + +V EA +++ M ++
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 297
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 142/312 (45%), Gaps = 19/312 (6%)
Query: 88 ANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGL 142
A +A +LLEE+K+ PD H+ ++ AN +D AM M G
Sbjct: 3 AGDLHAALELLEEMKSAGFAPD------AFTHTPIITAMANAGDLDGAMDHLRSM---GC 53
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+V AL+ +K EE ++ E + G PN TYN ++ + C+ +
Sbjct: 54 DPNVVTYTALIAAFARAKKLEEAMKLLEEM-RERGCPPNLVTYNVLVDALCKLSMVGAAQ 112
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
++ +M PN F L+ GF K +D K+L +M G+ V Y+ I L
Sbjct: 113 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 172
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CK ++ EAK +L+ M + G+ P+ TY LIHG K +E A+++ M GC PD
Sbjct: 173 CKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 232
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+ G+ A K + + P T +++ GL + K+AEA ++
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292
Query: 383 MKKRFPKSGDMW 394
M+ +SGD+
Sbjct: 293 MQ----ESGDVL 300
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 2/257 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + EEM G+ +AL+ G + EE +++ G P+ Y+ +
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG-SGCTPDVVVYSSI 238
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG- 247
I +FC+SG L EMR++ P+ + ++ G K K + +L M++ G
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD 298
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V Y+ I LCK EA+ LLD M G P++ TY +I G K G LE A+
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 358
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M GC P+ + LC+ + + A +V G P+ T ++V GL
Sbjct: 359 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 418
Query: 368 ASISKVAEANELIGLMK 384
++ EA +L+ MK
Sbjct: 419 CVSGRIKEAQQLVQRMK 435
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 143/361 (39%), Gaps = 53/361 (14%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A AP D + ++ ++ A + L + P N + I + +A
Sbjct: 19 AGFAP----DAFTHTPIITAMANAGDLDGAMDHLRSMGCDP----NVVTYTALIAAFARA 70
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILS---KNYEEVKRIFTEFPKVYGIEP 180
++ AM+ EEM + G ++ N L+ C LS + VK++ G P
Sbjct: 71 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG-----GFAP 125
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T+N ++ FC+ G+ +L M K +RPN + L+ G K K+ + +VL
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 185
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ G+ Y+ I LCK + EEA+ +L M G P++ Y +IH F K
Sbjct: 186 EEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS 245
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE----------------------- 337
G L A+K M PD + LC+ G+
Sbjct: 246 GKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVT 305
Query: 338 YETALK-VCRASM------------AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
Y T + +C++ M G P T +++ GL ++ EA L+ MK
Sbjct: 306 YSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMK 365
Query: 385 K 385
+
Sbjct: 366 R 366
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMID 128
D +S + L +A+ Q+L + PD+ V+S +++ ++ +
Sbjct: 196 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV------VYSSIIHAFCKSGKLL 249
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A +T +EM K V N ++ G C L K E + I + + + P+ TY+
Sbjct: 250 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK-IAEAQVILDQMQESGDVLPDVVTYST 308
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VI C+S +L M + P+ + ++ G K + E+ +LQ M++ G
Sbjct: 309 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 368
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
A V Y I LCK ++ +EA+ +++ M + G PNL TY +++G G ++ A+
Sbjct: 369 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 428
Query: 308 KLFASMTNG--GCEPDSYCF 325
+L M +G C PD+ +
Sbjct: 429 QLVQRMKDGRAECSPDAATY 448
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 36/231 (15%)
Query: 193 CESGDSSSVYSILAEMRRKSI--------------------------------RPNATDF 220
C +GD + +L EM+ PN +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+A F + K E+ K+L+ M + G + YN+ + +LCKL A+ ++ M+
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G PN+ T+ L+ GF K GN++ A+KL M G P+ + LC+ ++
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
A +V A G P T +L+ GL K+ EA +++ +R SG
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQML----RRMAGSG 227
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 37/356 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + KL F A+ +L E++ D + E ++ + YG+ + A+ FE
Sbjct: 42 TYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFER 101
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
MD Y SV + NA++ + + + +++ + GI P+ T+ +KSFC +G
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI-GIYPDVYTHTIRMKSFCITG 160
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
++ +L M + NA + +++GFYKE+ + + M K GI + +N
Sbjct: 161 RPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFN 220
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS---- 312
I LCK +E++ L ++ RG+ PNL T+ I G ++G ++ A +L S
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280
Query: 313 -------------------------------MTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
M N G EP+ + + C+ G + A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI-GLMKKRFPKSGDMWNA 396
K+ R +M KG++P T SL+ GL + + A + M+K F S ++N
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E +F E K GI P+ T+NK+I C+ G+ + +++ ++ + PN F +
Sbjct: 199 EAYHLFDEMLK-QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G ++ ++ ++L+ + G+ V YN I CK + EA+ L M++ G+
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+PN TY +I+GF K G ++ A K+ G PD + + LC G+ A+
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
V +M KG+ +LV GL+ V +A +L+ M + S D+W L
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH-GCSPDIWTYNL 431
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 126/311 (40%), Gaps = 44/311 (14%)
Query: 116 HSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
HSI+LY + ++ A+Q ++M ++G + N ++ G + I
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
+ G P+ T+N +I +C+ + IL M I P+ + LL G
Sbjct: 449 LND-AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K K ++V + M + G + YNI I+S CK ++ EA L M +RG+ P++
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567
Query: 289 TYKHLIHGFGKEG------------------------------------NLEGAKKLFAS 312
T LI G G N+ A+KLF
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M C PD+Y + + C+ G + A +++KG VP F+T ++ L +
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687
Query: 373 VAEANELIGLM 383
++EA +I LM
Sbjct: 688 LSEAVVIINLM 698
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 127/297 (42%), Gaps = 40/297 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
ID A + E + GL V + N L+ G C SK E + G+EPN TY
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE--AECYLHKMVNSGVEPNEFTY 324
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRP-------------NATDFGLLLAGFY---- 228
N +I FC++G + IL + K P N D +A FY
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384
Query: 229 KEHKYEDV------------GKVLQ-------MMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K K+ + G VLQ MME G + + YN+ + LCK+
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH-GCSPDIWTYNLVVNGLCKMGCLS 443
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A +L+ +++G P++ T+ LI G+ K+ N++ A ++ +M + G PD +
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + + + +A + KG P+ T L+ KV+EA EL MK R
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 5/220 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSET 184
++ AM F E + G + S+ N L+ G LSK + ++ + + +G P+ T
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKG--LSKQGLVLQALQLMKDMME-HGCSPDIWT 428
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN V+ C+ G S IL + K P+ F L+ G+ K+ + ++L M
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI V YN + LCK ++ + ML +G PN+ TY LI F K+ +
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
A +LF M G PD LC GE + A ++
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN ++K + G ++ +M P+ + L++ G K D +L
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G + +N I CK + ++A +LD MLS GI P++ TY L++G K L+
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
F +M GC P+ + + C+ + A+++ + +G P T+ +L+
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 365 TGLASISKVAEANELIGLMKK--RFPKSGDMWNAAL 398
GL S ++ +A EL ++K +F S ++N +
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 7/280 (2%)
Query: 105 PD-LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
PD L N+ HV L + N + + + F ++ K G+ ++ N + G +
Sbjct: 214 PDILTFNKLIHV----LCKKGN-VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E R+ G+ P+ +YN +I FC+ L +M + PN + +
Sbjct: 269 EAARLLESIVS-EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF K ++ K+L+ G Y+ I LC A A+ + +G
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
K ++ Y L+ G K+G + A +L M GC PD + + + LC+ G A
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ ++AKG +P T +L+ G + +A E++ M
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM 487
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 3/268 (1%)
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMD-KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
HV +++ Y + +A++ F ++ + G + +++ ++ L +E ++ + E
Sbjct: 9 HVAAVIRYQNDPL--NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM 66
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K + Y +++ + G ++ M P+ + ++ +
Sbjct: 67 RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGY 126
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ KV M+ GI V + IR++S C R A LL+ M +G + N +Y
Sbjct: 127 FSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCA 186
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I GF KE A LF M G PD F + LC+ G + + K+ M +G
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELI 380
P+ T + GL + EA L+
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLL 274
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 38/235 (16%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q NM D A++ + M +G+ V N LL G ++ + V F + G PN
Sbjct: 474 QRNM-DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE-KGCTPNI 531
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY-------------- 228
TYN +I+SFC+ S + EM+ + + P+ L+ G
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591
Query: 229 --KEHKYEDVGKVLQMM-----EKCGI---------------ASGVNVYNIRIQSLCKLK 266
KE+K+ + +M EK + A Y + I S CK
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+ A L +S+G+ P+ T +++ L A + M G P+
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 154/356 (43%), Gaps = 37/356 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + KL F A+ +L E++ D + E ++ + YG+ + A+ FE
Sbjct: 42 TYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFER 101
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
MD Y SV + NA++ + + + +++ + GI P+ T+ +KSFC +G
Sbjct: 102 MDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDI-GIYPDVYTHTIRMKSFCITG 160
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
++ +L M + NA + +++GFYKE+ + + M K GI + +N
Sbjct: 161 RPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFN 220
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS---- 312
I LCK +E++ L ++ RG+ PNL T+ I G ++G ++ A +L S
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280
Query: 313 -------------------------------MTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
M N G EP+ + + C+ G + A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI-GLMKKRFPKSGDMWNA 396
K+ R +M KG++P T SL+ GL + + A + M+K F S ++N
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 2/235 (0%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E +F E K GI P+ T+NK+I C+ G+ + +++ ++ + PN F +
Sbjct: 199 EAYHLFDEMLK-QGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIF 257
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G ++ ++ ++L+ + G+ V YN I CK + EA+ L M++ G+
Sbjct: 258 IQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGV 317
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+PN TY +I+GF K G ++ A K+ G PD + + LC G+ A+
Sbjct: 318 EPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMA 377
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
V +M KG+ +LV GL+ V +A +L+ M + S D+W L
Sbjct: 378 VFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH-GCSPDIWTYNL 431
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 126/311 (40%), Gaps = 44/311 (14%)
Query: 116 HSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
HSI+LY + ++ A+Q ++M ++G + N ++ G + I
Sbjct: 389 HSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI 448
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
+ G P+ T+N +I +C+ + IL M I P+ + LL G
Sbjct: 449 LND-AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K K ++V + M + G + YNI I+S CK ++ EA L M +RG+ P++
Sbjct: 508 KARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIV 567
Query: 289 TYKHLIHGFGKEG------------------------------------NLEGAKKLFAS 312
T LI G G N+ A+KLF
Sbjct: 568 TLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHK 627
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M C PD+Y + + C+ G + A +++KG VP F+T ++ L +
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687
Query: 373 VAEANELIGLM 383
++EA +I LM
Sbjct: 688 LSEAVVIINLM 698
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 127/297 (42%), Gaps = 40/297 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
ID A + E + GL V + N L+ G C SK E + G+EPN TY
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE--AECYLHKMVNSGVEPNEFTY 324
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRP-------------NATDFGLLLAGFY---- 228
N +I FC++G + IL + K P N D +A FY
Sbjct: 325 NTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAME 384
Query: 229 KEHKYEDV------------GKVLQ-------MMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K K+ + G VLQ MME G + + YN+ + LCK+
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH-GCSPDIWTYNLVVNGLCKMGCLS 443
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A +L+ +++G P++ T+ LI G+ K+ N++ A ++ +M + G PD +
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + + + +A + KG P+ T L+ KV+EA EL MK R
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 5/220 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSET 184
++ AM F E + G + S+ N L+ G LSK + ++ + + +G P+ T
Sbjct: 372 MNRAMAVFYEAMEKGFKHSIILYNTLVKG--LSKQGLVLQALQLMKDMME-HGCSPDIWT 428
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN V+ C+ G S IL + K P+ F L+ G+ K+ + ++L M
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI V YN + LCK ++ + ML +G PN+ TY LI F K+ +
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
A +LF M G PD LC GE + A ++
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN ++K + G ++ +M P+ + L++ G K D +L
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAI 453
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G + +N I CK + ++A +LD MLS GI P++ TY L++G K L+
Sbjct: 454 AKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLD 513
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
F +M GC P+ + + C+ + A+++ + +G P T+ +L+
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 365 TGLASISKVAEANELIGLMKKRF 387
GL S ++ +A EL ++K +
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEY 596
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 117/280 (41%), Gaps = 7/280 (2%)
Query: 105 PD-LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
PD L N+ HV L + N + + + F ++ K G+ ++ N + G +
Sbjct: 214 PDILTFNKLIHV----LCKKGN-VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAID 268
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E R+ G+ P+ +YN +I FC+ L +M + PN + +
Sbjct: 269 EAARLLESIVS-EGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF K ++ K+L+ G Y+ I LC A A+ + +G
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
K ++ Y L+ G K+G + A +L M GC PD + + + LC+ G A
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ ++AKG +P T +L+ G + +A E++ M
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM 487
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 3/268 (1%)
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMD-KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
HV +++ Y + +A++ F ++ + G + +++ ++ L +E ++ + E
Sbjct: 9 HVAAVIRYQNDPL--NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEM 66
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K + Y +++ + G ++ M P+ + ++ +
Sbjct: 67 RKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGY 126
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ KV M+ GI V + IR++S C R A LL+ M +G + N +Y
Sbjct: 127 FSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCA 186
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I GF KE A LF M G PD F + LC+ G + + K+ M +G
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELI 380
P+ T + GL + EA L+
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLL 274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 87/235 (37%), Gaps = 38/235 (16%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q NM D A++ + M +G+ V N LL G ++ + V F + G PN
Sbjct: 474 QRNM-DKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE-KGCTPNI 531
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY-------------- 228
TYN +I+SFC+ S + EM+ + + P+ L+ G
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591
Query: 229 --KEHKYE-----------------DVGKVLQMMEKCG---IASGVNVYNIRIQSLCKLK 266
KE+K+ +V ++ K G A Y + I S CK
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+ A L +S+G+ P+ T +++ L A + M G P+
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 154/337 (45%), Gaps = 8/337 (2%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
A LK + +P + L I + + + KL F+A+ ++L E++ D
Sbjct: 12 AVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVD 71
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
E +V ++ YG+ + A+ FE MD Y S+ + NA++ + + +
Sbjct: 72 NSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAH 131
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+++ K GI P+ T+ IKSFC + + +L M + NA + +++G
Sbjct: 132 KVYLRM-KHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISG 190
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
FY+E+ + ++ M + GI + +N + LCK +E + LL+ +L G+ PN
Sbjct: 191 FYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPN 250
Query: 287 LDTYKHLIHGFGKEGNLEG-------AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
L T+ I G ++G LEG A+ M N G EPD + + Y + G+ +
Sbjct: 251 LFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQ 310
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
A ++ + + KG+VP T SL+ G+ + A
Sbjct: 311 DASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHA 347
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 1/268 (0%)
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
VL G + + A +M GL N ++ G ++ RI + K G
Sbjct: 266 VLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD-AKFKGF 324
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ TY +I C+ GD ++ E K ++P+ + L+ G ++ +
Sbjct: 325 VPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQ 384
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
++ M K G++ + YN+ I LCK+ +A LL+ +++G P++ T+ LI G+
Sbjct: 385 LMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYC 444
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K ++ A + SM + G PD + LC+ + E ++ + M KG +P+
Sbjct: 445 KRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNII 504
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ L KV EA +L+ ++ R
Sbjct: 505 TYNILIESLCKARKVTEALDLLEEIRNR 532
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 95/211 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++P+ YN +IK + G ++ +M ++ + P+ + L++ G K D
Sbjct: 358 GLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDA 417
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L G + +N I CK + + A +LD M S G+ P++ TY +++G
Sbjct: 418 NNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNG 477
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K E + F + GC P+ + + LC+ + AL + +G +P
Sbjct: 478 LCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRF 387
+ ++++G + + EA +L M++++
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQY 568
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 9/262 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D+A+ + M +G+ V N++L G + E+V F + G PN TYN
Sbjct: 449 MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME-KGCLPNIITYN 507
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK- 245
+I+S C++ + +L E+R + + P+ FG +++GF ++ ++ + ME+
Sbjct: 508 ILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQ 567
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
I V YNI I + + + A+ L M +G P+ TY+ +I GF K GN+
Sbjct: 568 YRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNS 627
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
G P F LC A+ + + G VP +++VT
Sbjct: 628 GYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP-----EAVVT 682
Query: 366 GLASISKVAEANELI--GLMKK 385
+ K A ++I L+KK
Sbjct: 683 IFDADKKAVAAPKIIVEDLLKK 704
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 7/177 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQT 133
+ ++I + L +A LLEE++ R + F V+ G N +D A Q
Sbjct: 504 ITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSF---GTVISGFCNNGDLDEAYQL 560
Query: 134 FEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F M++ Y + +V N ++ + + +++F E G +P+S TY +I F
Sbjct: 561 FRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGD-KGCDPDSYTYRVMIDGF 619
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G+ +S Y L + P+ T FG ++ +H+ + ++ +M + G+
Sbjct: 620 CKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVV 676
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 124/265 (46%), Gaps = 3/265 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+ ++I+ G +A ++ A TFEEM K GL+ +A +AL+ G + + +EV RI +
Sbjct: 11 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KD 69
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
GI N TYN +I C+ G IL M +PN+ F LL+ G+ +EH
Sbjct: 70 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 129
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++L MEK + Y I LC K A LL+ M G+KPN+ Y
Sbjct: 130 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 189
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G+ EG +E A++L M+ G PD +C+ L + G+ E A +
Sbjct: 190 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G P T + + G + K+ EA
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEA 274
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 13/326 (3%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERF 113
R+LD + +AP D ++ +S LS+A S L E++ R PD F
Sbjct: 206 RLLDGMSCSGVAP----DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
I+ Y + + A + F+EM +GL + L+ G + N E IF
Sbjct: 262 ----ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLH 317
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G+ P+ +T + I ++G + +E++ K + P+ + L++GF K+ +
Sbjct: 318 AL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 376
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E ++ M GIA + +YN + LCK + A+ L DGM +G++P+ TY +
Sbjct: 377 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 436
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G+ K N+ A LF M + G +P S+ + + C+ G+ E A+ + R + KG+
Sbjct: 437 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 496
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
S +L+ G K+ EA++L
Sbjct: 497 ATTLS-FNTLIDGYCKSCKIQEASQL 521
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN+ TY + C + + EM++ ++P+ L+ GF +E ++V
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ +M CGI + YN+ I LCK + E+A +L GM++ G KPN T+ LI G
Sbjct: 65 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +E N+ A +L M P + + LC + A K+ G P+
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
+L+ G AS ++ EA L+ M
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGM 211
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + E+M GL+ +V + L++G EE +R+ G+ P+ YN +I
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM-SCSGVAPDIFCYNAII 227
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
++G + L E++ + ++P+A FG + G+ K K + K M G+
Sbjct: 228 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 287
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+Y + I K EA ++ + + G+ P++ T IHG K G ++ A K+
Sbjct: 288 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 347
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F+ + G PD + + C+ GE E A ++ KG P+ +LV GL
Sbjct: 348 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 407
Query: 370 ISKVAEANELIGLMKKR 386
+ A +L M ++
Sbjct: 408 SGDIQRARKLFDGMPEK 424
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A + +EM G+ ++ NAL+ G S + + +++F P+ G+EP+S TY+
Sbjct: 376 VEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE-KGLEPDSVTYS 434
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+S + + +S+ EM K ++P++ + L+ G KE E + + M +
Sbjct: 435 TMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 494
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A+ ++ +N I CK + +EA L M+++ I P+ TY +I K G +E A
Sbjct: 495 GFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 553
Query: 307 K-----------------KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
LF M G +PD + + Y C+ A K+ +
Sbjct: 554 NLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 613
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
KG + + L+T L + EA++L+ M
Sbjct: 614 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 647
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 4/272 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H + +G+ ++ A + + M G + + L+ G N + E K
Sbjct: 87 IHGLCKFGK---MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 143
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ P++ +Y +I C D S +L +M ++PN + L+ G+ E + E
Sbjct: 144 -RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIE 202
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ ++L M G+A + YN I L K + EEA L + RG+KP+ T+ I
Sbjct: 203 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 262
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G+ K G + A K F M + G P++ + + + G AL + R A G +
Sbjct: 263 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVL 322
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T + + GL +V EA ++ +K++
Sbjct: 323 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 26/275 (9%)
Query: 69 PESPL--DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QA 124
PE L D + +S + ++ + L E+ ++ Q F V++ +++G +
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG--VQPHSF-VYNALVHGCCKE 478
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
++ AM F EM + G ++ + N L+ G S +E ++F E I P+ T
Sbjct: 479 GDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMI-AKQIMPDHVT 536
Query: 185 YNKVIKSFCESGD-----------------SSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
Y VI C++G +V+++ +M K ++P+ +GL++
Sbjct: 537 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAH 596
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
KE + K+ + G+ + ++++ I +LCK + EA LLD M G+KP+L
Sbjct: 597 CKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSL 656
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
L+ F + G ++ A ++F + + G PD+
Sbjct: 657 AACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDT 691
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M K + PN + ++ AG + + + + M+K G+ N + I +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+E + D M+S GI NL TY LIHG K G +E A ++ M GC+P+S F +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ AL++ + VP + +++ GL ++ AN+L+
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 173
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ Y I LC+ KR EAK + M G+KP+ + LI GF +EG+++
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M + G + + + + LC+ G+ E A ++ + + G P+ T L+ G
Sbjct: 65 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124
Query: 367 LASISKVAEANELIGLMKKR 386
+ A EL+ M+KR
Sbjct: 125 YCREHNMGRALELLDEMEKR 144
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 165 VKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
V +F F K+ G++P+ TY VI + C+ + + + E+ K + T L
Sbjct: 567 VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 626
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ K + K+L M + G+ + + ++S + + +EA + +G+ S G
Sbjct: 627 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 686
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+ P+ T L++G + + E A+ L +
Sbjct: 687 LVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 148/315 (46%), Gaps = 7/315 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHA 130
P D M +S ++ L + +L +E+K R R+ + +++ G+A +D A
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG--RKPDSITFTALMDALGKAGRVDDA 238
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ +EM + G++ V NAL+ G + E + E K G +P+ TY+ +I
Sbjct: 239 LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM-KRNGCKPDVVTYSCLIT 297
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++ +L +M ++ P+ + L+ G K D G++ M+ G
Sbjct: 298 GLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y+ I +L K R E A L + M S GI+P+L TY +I GK G ++ A +LF
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLF 417
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M G PD + F L +GG ++ A K+ G +P +T +L+ GL
Sbjct: 418 SEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGL--- 474
Query: 371 SKVAEANELIGLMKK 385
SK E ++ GL+K+
Sbjct: 475 SKTKEVDDACGLLKE 489
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++S ++ L +A + A +++ E++ + + N + + G+A D A++
Sbjct: 43 DVVSYSCLINSLGRAGKWEAALEVVAEMQAK-GCKPNLWTYNTLVDCLGKAGQFDEALRL 101
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM G V N L+ + E +F E + G P++ TYN +I
Sbjct: 102 LAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM-RERGCVPDTFTYNSLIYGLG 160
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G S +L EM R P+ + L+ G K+ + K+ Q M++ G
Sbjct: 161 KVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSI 220
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+ + +L K R ++A LLD M RG+KP + TY LI GFGK G+L A L M
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC+PD + L + + + A +V + +G P T +L+ GL +
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLL 340
Query: 374 AEANELIGLMKKR 386
+A L MK +
Sbjct: 341 NDAGRLFDRMKSK 353
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 148/352 (42%), Gaps = 47/352 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDH 129
D ++ +S L +A + L E++ R PD F +S++ G+
Sbjct: 113 DVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPD-----TFTYNSLIYGLGKVGRSQK 167
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK--RIFTEFP-------------- 173
AM+ EEM+++G V ++L+ G L K+ E VK ++F E
Sbjct: 168 AMELLEEMERHGCPPDVMTYSSLITG--LGKDGETVKAFKLFQEMKRRGRKPDSITFTAL 225
Query: 174 --------------------KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
K G++P TYN +I F + GD Y++L EM+R
Sbjct: 226 MDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC 285
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+P+ + L+ G K + ++ +VL+ MEK G YN I L K +A
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGR 345
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L D M S+G P++ TY LI GK +E A LF M + G +PD + + L
Sbjct: 346 LFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLG 405
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ G+ + A ++ KG P T + + L + EA ++ MK+
Sbjct: 406 KAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKE 457
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 110/242 (45%), Gaps = 1/242 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N+LL + EE + +F E K P+ +Y+ +I S +G + ++AEM+
Sbjct: 13 NSLLNALAKAGQCEEAQLLFEEL-KAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K +PN + L+ K ++++ ++L M G V YN I +L K R
Sbjct: 72 AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L M RG P+ TY LI+G GK G + A +L M GC PD +
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
L + GE A K+ + +G P T +L+ L +V +A EL+ MK+R K
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVK 251
Query: 390 SG 391
G
Sbjct: 252 PG 253
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN ++ + ++G + E++ P+ + L+ + K+E +V
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M+ G + YN + L K + +EA LL M G P++ TY LI GK
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G L A LFA M GC PD++ + Y L + G + A+++ G P T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
SL+TGL + +A +L MK+R
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRR 213
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 130/285 (45%), Gaps = 12/285 (4%)
Query: 97 LLEELK---TRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNA 151
LL+E+K +PD+ +S ++ G +A+ +D A Q ++M+K G N
Sbjct: 276 LLDEMKRNGCKPDV------VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNT 329
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
L+ G + + R+F K G P+ TY+ +I + ++ S + EM
Sbjct: 330 LINGLGKAGLLNDAGRLFDRM-KSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESV 388
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
I+P+ + ++ K + +D ++ M G++ V YN + SL + R +EA
Sbjct: 389 GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEA 448
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ + + M G+ P++ TY L+ G K ++ A L + GC DS F
Sbjct: 449 RKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEI 508
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
L G + A ++ + + +KG P S+ +L+ LA +V+EA
Sbjct: 509 LTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEA 553
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 120/276 (43%), Gaps = 8/276 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMID 128
P D + ++ ++ L +A N +L + +K++ PD+ + I G+A ++
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT----YSTLITALGKAARVE 376
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A FEEM+ G++ + +++ + ++ R+F+E + G+ P+ TYN
Sbjct: 377 SACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM-RGKGLSPDVITYNAF 435
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ S G I +M+ + P+ + LL G K + +D +L+ + + G
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC 495
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A ++ ++ L +EA LL S+G+ P +Y LI K G + A
Sbjct: 496 AFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFN 555
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
+ G +PD + L Q G+ +TA ++
Sbjct: 556 TLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFEL 591
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 132/316 (41%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + +S ++ L +A+ + Q+L++++ PD I G+A +++ A
Sbjct: 288 DVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL----INGLGKAGLLNDA 343
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F+ M G V + L+ + E +F E V GI+P+ TY +I
Sbjct: 344 GRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESV-GIQPDLFTYCSIIT 402
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++G + +EMR K + P+ + L + ++++ K+ + M++ G+
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP 462
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y+ + L K K ++A LL ++ +G + + + GN++ A +L
Sbjct: 463 DVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELL 522
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ G P + + L + G A +G P + SL++ L
Sbjct: 523 QFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQT 582
Query: 371 SKVAEANELIGLMKKR 386
++ A EL+ M KR
Sbjct: 583 GQIDTAFELLEEMSKR 598
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 129/274 (47%), Gaps = 5/274 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ N I ++EM K + +++ N + G + + + + K +GI PN
Sbjct: 177 KENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDM-KAWGISPNV 235
Query: 183 ETYNKVIKSFCESGDSSSVY---SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
TYN ++ +C+ G + +Y + + EM I PN F L+ GF K+ K
Sbjct: 236 VTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKA 295
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M+K G+ + YN I LC + EEA L D M+ G+KPN+ TY LI+GF K
Sbjct: 296 FEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCK 355
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ ++ A K+F ++ P+ F C+ G E +C + + +G +P+ ST
Sbjct: 356 KKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVST 415
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
L+ GL + A EL+ M+ + K GD+
Sbjct: 416 YNCLIAGLCRKQDLQAAKELLNEMENKGLK-GDV 448
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 3/255 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + FEEM K GL+ ++ N+L+ G + EE ++ + + G++PN TYN +I
Sbjct: 292 AKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGL-GLKPNIVTYNALI 350
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ + ++ ++ + PN F ++ + KE E+ + M GI
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V+ YN I LC+ + + AK LL+ M ++G+K ++ TY LI G K A+KL
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW-VPHFSTMKSLVTGLA 368
M N G +P+ + C G+ + AL V R M K P+ T L+ G
Sbjct: 471 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV-RTRMEKERKQPNVVTYNVLIKGYC 529
Query: 369 SISKVAEANELIGLM 383
I+K+ AN L+ M
Sbjct: 530 KINKLEAANGLLNEM 544
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 117/233 (50%), Gaps = 1/233 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +++M GL+ ++ NAL+ G K +E ++F + K + PN T+N
Sbjct: 324 LEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK-QELVPNVITFN 382
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I ++C+ G +S+ + M + I PN + + L+AG ++ + ++L ME
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V YNI I LCK +S A+ LL+ M + G+KPN TY L+ G+ EG L+ A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ M +P+ + + C+ + E A + + KG P+ +T
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTT 555
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 5/303 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
F+I ++ L +A N +E++K P++ V G A + A
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTL-VDGYCKRGSAGKMYKAEAF 260
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM + + N L+ G +N K+ F E K G++PN TYN +I C
Sbjct: 261 MKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQK-QGLKPNIVTYNSLINGLC 319
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G + +M ++PN + L+ GF K+ ++ KV + K + V
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVI 379
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N I + CK EE +L ML GI PN+ TY LI G ++ +L+ AK+L M
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
N G + D + + LC+ + A K+ G P+ T +L+ G K+
Sbjct: 440 ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKL 499
Query: 374 AEA 376
A
Sbjct: 500 KAA 502
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + M++ M G+ +V N L+ G ++ + K + E G++
Sbjct: 388 YCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN-KGLKG 446
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I C++ S + +L EM ++PN + L+ G+ E K + V
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVR 506
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
MEK V YN+ I+ CK+ + E A LL+ ML +G+ PN TY
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 105/261 (40%), Gaps = 53/261 (20%)
Query: 171 EFPKVYGIEP---------NSETYNKVIKSFCES---GDSSSVYSILAEMRRKSIRPNAT 218
E+ YG+EP NS+ Y+KV +SF +S + +V S+ + RP AT
Sbjct: 71 EYRLSYGLEPTSKVLHFLANSKRYSKV-RSFLDSFVKNEKHTVSSVFHSLLLDGGRPGAT 129
Query: 219 ----------------------------DFGL---------LLAGFYKEHKYEDVGKVLQ 241
D+G LL+ KE+K DV V +
Sbjct: 130 ALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYK 189
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF---G 298
M K I + +N +NI I LC+ + +A+ ++ M + GI PN+ TY L+ G+ G
Sbjct: 190 EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG 249
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
G + A+ M P+ F C+ A K +G P+
Sbjct: 250 SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIV 309
Query: 359 TMKSLVTGLASISKVAEANEL 379
T SL+ GL + K+ EA +L
Sbjct: 310 TYNSLINGLCNNGKLEEAIDL 330
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM+ GL+ V N L+ G + +++ E + G++PN TYN ++
Sbjct: 432 AKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNL-GLKPNHVTYNTLM 490
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C G + ++ M ++ +PN + +L+ G+ K +K E +L M + G+
Sbjct: 491 DGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLN 550
Query: 250 SGVNVYNI-RIQSLCK 264
Y+I R++ L K
Sbjct: 551 PNRTTYDIVRLEMLEK 566
>gi|326527465|dbj|BAK08007.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 3/292 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+ + + +L+ A F + +LL + R ++ F I +YG AN + AM+T
Sbjct: 74 YGLMIDRLAGARRFGDVEELLARARAE-RFRFSDDFFYRLIKMYGNVANHPEKAMETLYA 132
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M +YG S N +L + + YE V +++ P++ G+E ++ +N +IK C+ G
Sbjct: 133 MSEYGCWPSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRL-GVELDTCCFNILIKGLCQFG 191
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ S+L EM ++ RPNA + L+ + + ++ ++ + M K I + VYN
Sbjct: 192 RFNEALSLLDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYN 251
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + LC+ R A L M S+G PN TY+ L+ G N AK L M+
Sbjct: 252 ILVSGLCREGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMMSAE 311
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
P + + C + A V + + +G+VP ST L+T L
Sbjct: 312 SLRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRMSTWTKLLTSLC 363
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ F +L +YE V +V + G+ +NI I+ LC+ R EA +L
Sbjct: 140 PSTKTFNYVLHMLVCRRQYEVVHEVYSSAPRLGVELDTCCFNILIKGLCQFGRFNEALSL 199
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
LD M + +PN TY L+H + ++ A +LF M + D+ + + LC+
Sbjct: 200 LDEMPKQDCRPNAMTYSTLMHFLCRNCRVDEAFELFERMRKEEIDADTVVYNILVSGLCR 259
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G +A + ++ ++G P+ T + L+ GL + EA +L+G+M
Sbjct: 260 EGRVTSAYDLFKSMSSQGCHPNSGTYQVLLDGLVASKNFVEAKDLVGMM 308
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 2/191 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD F+I + L Q FN LL+E+ + D R N + + + +D A +
Sbjct: 175 LDTCCFNILIKGLCQFGRFNEALSLLDEMP-KQDCRPNAMTYSTLMHFLCRNCRVDEAFE 233
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
FE M K + N L+ G +F G PNS TY ++
Sbjct: 234 LFERMRKEEIDADTVVYNILVSGLCREGRVTSAYDLFKSMSS-QGCHPNSGTYQVLLDGL 292
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
S + ++ M +S+RP+ + + LL+ GF + +D VL+ M G +
Sbjct: 293 VASKNFVEAKDLVGMMSAESLRPSFSSYKLLIDGFCSVNCLDDAHHVLKQMVDQGFVPRM 352
Query: 253 NVYNIRIQSLC 263
+ + + SLC
Sbjct: 353 STWTKLLTSLC 363
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Query: 186 NKVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N+V+K F D++ + S+ + R+ +P+ +GL++ ++ DV ++L
Sbjct: 39 NEVLKIFASIRDAALITSVFRKACARRDYKPSEALYGLMIDRLAGARRFGDVEELLARAR 98
Query: 245 KCGIASGVNVYNIRIQSLCKL-KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ + I+ + E+A L M G P+ T+ +++H
Sbjct: 99 AERFRFSDDFFYRLIKMYGNVANHPEKAMETLYAMSEYGCWPSTKTFNYVLHMLVCRRQY 158
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E ++++S G E D+ CF + LCQ G + AL + + P+ T +L
Sbjct: 159 EVVHEVYSSAPRLGVELDTCCFNILIKGLCQFGRFNEALSLLDEMPKQDCRPNAMTYSTL 218
Query: 364 VTGLASISKVAEANELIGLMKK 385
+ L +V EA EL M+K
Sbjct: 219 MHFLCRNCRVDEAFELFERMRK 240
>gi|15219274|ref|NP_175740.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75192173|sp|Q9MAG8.1|PPR79_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g53330
gi|7769859|gb|AAF69537.1|AC008007_12 F12M16.23 [Arabidopsis thaliana]
gi|332194805|gb|AEE32926.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 471
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++I+++G Q+ D A++ F+EM K ++ + L+ G +E ++ +
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
KVYG+ P Y +IK+ C+ G+ S + + E I+ +A + L++ K +
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+V +L+ M + G YN+ I C SE A +LD M+ +G+KP++ +Y +
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMI 334
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ F + E A LF M GC PD+ + + LC+G ++E A + + KG+
Sbjct: 335 LGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAALP 399
P ++ + L K+ +++I + + D+W+ +P
Sbjct: 395 KPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIP 440
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMI 127
+D +S +S L +A N +S +LEE+ +PD +++++ G N
Sbjct: 256 VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTV------TYNVLINGFCVENDS 309
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + +EM + GL+ V + N +L K +EE +F + P+ G P++ +Y
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR-RGCSPDTLSYRI 368
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
V CE IL EM K +P L + K E + KV+ + + G
Sbjct: 369 VFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR-G 427
Query: 248 IASGVNVYNIRIQSLCK 264
IA +V+++ I ++CK
Sbjct: 428 IAGDADVWSVMIPTMCK 444
>gi|297746144|emb|CBI16200.3| unnamed protein product [Vitis vinifera]
Length = 1093
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 157/348 (45%), Gaps = 37/348 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++S V KL+++ +F A+ LL+ L+ ++R E + I YG++ M + A++
Sbjct: 483 DYPSYSALVYKLARSRNFEAVETLLDYLQNI-NIRCRETLFIALIQHYGKSQMPEKAVEL 541
Query: 134 FEEM-----------------------------------DKYGLRQSVDALNALLLGCIL 158
F+ M K G R++ + N ++ G +
Sbjct: 542 FQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWLG 601
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
+++ ++F E ++P T+N +I C GD +L +M +K RPNA
Sbjct: 602 KGEWDKAWQVFEEMID-KEVKPTVVTFNSLIGFLCGKGDLDGAMGLLEDMIQKRHRPNAV 660
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ LL+ G KY++ K++ M+ G + + + + L + R +++K LL M
Sbjct: 661 TYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDSKTLLLEM 720
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
R KP++ TY LI+ KEG A K+ M GGCEP++ + M CQ ++
Sbjct: 721 KRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDF 780
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
E LKV A + G P + LV GL K+ A ++ M+KR
Sbjct: 781 EGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKR 828
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ F + + G + + +AL+ S+N+E V+ + ++ + I +
Sbjct: 466 DDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLL-DYLQNINIRCRETLFIA 524
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+ + +S + M + F LL + ++ D + K G
Sbjct: 525 LIQHYGKSQMPEKAVELFQRMPSFNCHRTLVSFNTLLNVLVENDRFLDAIGIFDRSTKMG 584
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+NI I+ ++A + + M+ + +KP + T+ LI +G+L+GA
Sbjct: 585 FRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAM 644
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M P++ + + LC G+Y+ A K+ +G P L++ L
Sbjct: 645 GLLEDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDL 704
Query: 368 ASISKVAEANELIGLMKKR 386
++ ++ L+ MK+R
Sbjct: 705 GRRGRIDDSKTLLLEMKRR 723
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 1/146 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+ ID + EM + + V N L+ E ++ E +V G EPN
Sbjct: 705 GRRGRIDDSKTLLLEMKRRRFKPDVVTYNILINHLCKEGRALEAYKVLVEM-QVGGCEPN 763
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY ++ FC+ D +L+ M P F L+ G K K + VL+
Sbjct: 764 AATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLE 823
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKR 267
MEK + + + ++ C R
Sbjct: 824 EMEKRKMRFHLEAWEALVKDACPGDR 849
>gi|147858028|emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
Length = 1051
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 37/348 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++S V KL+++ +F A+ LL+ L+ ++R E + I YG++ M + A++
Sbjct: 412 DYPSYSALVYKLARSRNFEAVETLLDYLQNI-NIRCRETLFIALIQHYGKSQMPEKAIEL 470
Query: 134 FEEM-----------------------------------DKYGLRQSVDALNALLLGCIL 158
F+ M K G R++ + N ++ G +
Sbjct: 471 FQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRSTKMGFRRNSISFNIIIKGWLG 530
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
+++ ++F E ++P T+N +I C GD +L +M +K RPNA
Sbjct: 531 KGEWDKAWQVFEEMID-KEVKPTVVTFNSLIGFLCGKGDLDGAMGLLZDMIQKRHRPNAV 589
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ LL+ G KY++ K++ M+ G + + + + L + R ++ K LL M
Sbjct: 590 TYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDLGRRGRIDDXKTLLLEM 649
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
R KP++ TY LI+ KEG A K+ M GGCEP++ + M CQ ++
Sbjct: 650 KRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEMQVGGCEPNAATYRMMVDGFCQVEDF 709
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
E LKV A + G P + LV GL K+ A ++ M+KR
Sbjct: 710 EGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLEEMEKR 757
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/259 (19%), Positives = 105/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ F + + G + + +AL+ S+N+E V+ + ++ + I +
Sbjct: 395 DDALSLFNQYQQMGFKHDYPSYSALVYKLARSRNFEAVETLL-DYLQNINIRCRETLFIA 453
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+ + +S + M + F LL + ++ D + K G
Sbjct: 454 LIQHYGKSQMPEKAIELFQRMPSFNCHRTIVSFNTLLNVLVEIDRFLDAIGIFDRSTKMG 513
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+NI I+ ++A + + M+ + +KP + T+ LI +G+L+GA
Sbjct: 514 FRRNSISFNIIIKGWLGKGEWDKAWQVFEEMIDKEVKPTVVTFNSLIGFLCGKGDLDGAM 573
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M P++ + + LC G+Y+ A K+ +G P L++ L
Sbjct: 574 GLLZDMIQKRHRPNAVTYALLMEGLCSLGKYKEAKKMMFDMDYQGCKPRLLNFGVLMSDL 633
Query: 368 ASISKVAEANELIGLMKKR 386
++ + L+ MK+R
Sbjct: 634 GRRGRIDDXKTLLLEMKRR 652
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 1/146 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+ ID EM + + V N L+ E ++ E +V G EPN
Sbjct: 634 GRRGRIDDXKTLLLEMKRRRFKPDVVTYNILINXLCKEGRAXEAYKVLVEM-QVGGCEPN 692
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY ++ FC+ D +L+ M P F L+ G K K + VL+
Sbjct: 693 AATYRMMVDGFCQVEDFEGGLKVLSAMLMCGHCPRLESFCDLVVGLLKNGKIDGACFVLE 752
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKR 267
MEK + + + ++ C R
Sbjct: 753 EMEKRKMRFHLEAWEALVKDACPGDR 778
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 162/356 (45%), Gaps = 48/356 (13%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNA----ISQLLEELKTRPDLRQNERFHVHSIV 119
GA AP + + ++ V+ +A + +S + EE +P+L V+ +
Sbjct: 38 GAGCAPNA----VTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM-VNGLC 92
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
+A ++ A + F+EM + GL V + N LL G E +F+E + G+
Sbjct: 93 ---KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQ-RGLV 148
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ T+ +I + C++G+ +++A+MR + +R N F L+ GF K+ +D
Sbjct: 149 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 208
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++ M KCGI V YN I CKL R + A+ L+ M ++ +KP++ TY +I G+ K
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 268
Query: 300 EGNLEGAKKL---------------FASMTNGGCE--------------------PDSYC 324
GNL+ A +L ++S+ G CE PD +
Sbjct: 269 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 328
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ C+ G E AL + + KG +P T L+ GL+ ++ EA+ L+
Sbjct: 329 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 384
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 151/358 (42%), Gaps = 54/358 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + +A + L+ +++ R LR NE I + + +D A+
Sbjct: 150 DVVTFTSLIHATCKAGNLEQAVALVAQMRER-GLRMNEVTFTALIDGFCKKGFLDDALLA 208
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM K G++ SV NAL+ G C L + ++ R + ++P+ TY+ +I +
Sbjct: 209 VEEMRKCGIQPSVVCYNALINGYCKLGR--MDLARELIREMEAKRVKPDVVTYSTIISGY 266
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G+ S + + +M +K + P+A + L+ G +E + D ++ + M + G+
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDE 326
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK------------- 299
Y I CK E+A +L D M+ +G+ P++ TY LI+G K
Sbjct: 327 FTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFK 386
Query: 300 -------------------------------------EGNLEGAKKLFASMTNGGCEPDS 322
+G ++ A K++ SM + + D
Sbjct: 387 LYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDG 446
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + C+GG AL + + G+ P+ ++ SLV GL V EA+ I
Sbjct: 447 SVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAI 504
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G+ PN TYN ++++ C G ++ +MR PNA + L+A F + + +
Sbjct: 4 HGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDG 63
Query: 236 VGKVLQMMEKCGIAS-GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+V+ +M + G A + +N + LCK R E A+ + D M+ G+ P++ +Y L+
Sbjct: 64 AERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G+ K G L + +F+ MT G PD F + C+ G E A+ + +G
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183
Query: 355 PHFSTMKSLVTGL 367
+ T +L+ G
Sbjct: 184 MNEVTFTALIDGF 196
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +M G + N L+ + + +R+ + + +PN T+N
Sbjct: 26 LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFN 85
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G + EM R+ + P+ + LL+G+ K + V M +
Sbjct: 86 SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 145
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V + I + CK E+A AL+ M RG++ N T+ LI GF K+G L+ A
Sbjct: 146 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 205
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +P C+ C+ G + A ++ R AK P T ++++G
Sbjct: 206 LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISG 265
Query: 367 LASISKVAEANELIGLMKKR 386
+ + A +L M K+
Sbjct: 266 YCKVGNLDSAFQLNQKMLKK 285
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 162/352 (46%), Gaps = 18/352 (5%)
Query: 40 EKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLE 99
++KR+ A+L ES P + L P +R ++ + + + ++ +
Sbjct: 323 KQKRSKEAKLIFESMP--------SSGLNP----NRFTYTALIDGFIKEGNIEEALRIKD 370
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
E+ TR L+ N + I +A + AM F EM GL N L+ G + S
Sbjct: 371 EMITR-GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKS 429
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+ + + E K + P+ TY+ +I C S D +L +M R ++PN
Sbjct: 430 HDMAKACELLAEM-KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFM 488
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+G L+ + +E +YE ++L++M G+ + YN I LC+ K+ EEAK LL M
Sbjct: 489 YGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMG 548
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+GIKPN TY I+ + K G ++ A++ F M + G P++ + + C G
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
AL + + KG +P +++ S+SK + E +G+ K F K+G
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAII---HSLSKNGKTKEAMGVFLK-FLKTG 656
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 16/314 (5%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S+ +S L ++ +++L+++ R ++ N + I Y Q + + A++ +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQM-IRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKI 511
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ + N L++G +K EE K + + + GI+PN+ TY I + +SG
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE-KGIKPNAHTYGAFINLYSKSG 570
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ-------MMEKCGIA 249
+ +M I PN + +L+ G + DVG ++ M+EK G+
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTILIKG------HCDVGNTVEALSTFKCMLEK-GLI 623
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+ I SL K +++EA + L G+ P++ Y LI GF KEG++E A +L
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ M + G P+ + LC+ GE A ++ K VP T +++ G
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCK 743
Query: 370 ISKVAEANELIGLM 383
+ EA +L M
Sbjct: 744 SGNLTEAFKLFDEM 757
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 7/221 (3%)
Query: 172 FPKVYG------IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
F KVYG I P+ TY VIK+ C+ GD +L+EM K +PN + +
Sbjct: 226 FWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIG 284
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G + ++ +V ++M + G+ + Y + + CK KRS+EAK + + M S G+ P
Sbjct: 285 GLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNP 344
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N TY LI GF KEGN+E A ++ M G + + + + + GE A+ +
Sbjct: 345 NRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G P T L+ G +A+A EL+ MK R
Sbjct: 405 NEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 137/318 (43%), Gaps = 7/318 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + L +A LL ++ + ++ N + I LY ++ I A +
Sbjct: 520 DLFCYNCLIIGLCRAKKVEEAKMLLVDMGEK-GIKPNAHTYGAFINLYSKSGEIQVAERY 578
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F++M G+ + L+ G C + E + K G+ P+ Y+ +I S
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEK--GLIPDIRAYSAIIHSL 636
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
++G + + + + + P+ + L++GF KE E ++ M GI +
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNI 696
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
VYN I LCKL +A+ L D + + + P++ TY +I G+ K GNL A KLF
Sbjct: 697 VVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDE 756
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + G PD Y + + + G E AL + + K V S SL+ K
Sbjct: 757 MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGK 815
Query: 373 VAEANELIGLM--KKRFP 388
V EA EL M KK P
Sbjct: 816 VIEARELFDDMVDKKLTP 833
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 142/327 (43%), Gaps = 16/327 (4%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-- 122
A L P D +++ + +++ +LL E+K R + +S+++ G
Sbjct: 410 AGLEP----DTWTYNLLIDGYLKSHDMAKACELLAEMKAR---KLTPSPFTYSVLISGLC 462
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY---GIE 179
++ + A + ++M + G++ +V L+ + YE + E K+ G+
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE----MAIELLKIMIANGVL 518
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ YN +I C + +L +M K I+PNA +G + + K + + +
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M GI +Y I I+ C + + EA + ML +G+ P++ Y +IH K
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A +F G PD + + C+ G+ E A ++ + G P+
Sbjct: 639 NGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVV 698
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+L+ GL + +V +A EL ++++
Sbjct: 699 YNTLINGLCKLGEVTKARELFDEIEEK 725
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 4/220 (1%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
EVK++ E G+ P+ TY ++ FC+ S I M + PN + L
Sbjct: 297 EVKKLMME----KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF KE E+ ++ M G+ V YN I + K +A +L + ML G+
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+P+ TY LI G+ K ++ A +L A M P + + + LC + + A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
V + G P+ +L+ S+ A EL+ +M
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 144/352 (40%), Gaps = 46/352 (13%)
Query: 74 DRMAFSIAVSKLSQANHF-NAISQLLEELKT--RPDLRQNERFHVHSIVL-YGQANMIDH 129
D A+S + LS+ A+ L+ LKT PD+ F +S++ + + I+
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV-----FLYNSLISGFCKEGDIEK 679
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A Q ++EM G+ ++ N L+ G + + +F E + + P+ TY+ +I
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEE-KDLVPDVVTYSTII 738
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+SG+ + + + EM K I P+ + +L+ G KE E + ++ +
Sbjct: 739 DGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG 798
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGML------------------------------ 279
S ++ +N I S CK + EA+ L D M+
Sbjct: 799 S-LSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQL 857
Query: 280 -----SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+R I PN TY L+ + + GN LF M G D+ + + C+
Sbjct: 858 FLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCK 917
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ ALK+ S+ +G +L+ L +++ EL+ M K
Sbjct: 918 EGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKE 969
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F++M L ++ L+ ++ EE +++F + + I PN+ TY +
Sbjct: 818 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM-ETRNIIPNTLTYTSL 876
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ S+ + G+ + S+ +M + I +A +G++ + + KE K + K+L GI
Sbjct: 877 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+V++ I LCK K+ LL M + + T L+ GF K GN + A K
Sbjct: 937 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 996
Query: 309 LFASMTNGGCEPDS 322
+ M G P S
Sbjct: 997 VLGVMQRLGWVPTS 1010
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 66/178 (37%), Gaps = 40/178 (22%)
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-------------------------- 282
S + V++I I L EA ++ +S G
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWK 228
Query: 283 ---------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
I P++ TY ++I K G++ K + + M C+P+ + + F LC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLC 287
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
Q G + AL+V + M KG P T LV G + EA L+ + P SG
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK----LIFESMPSSG 341
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++ I ++ L Q LLEE+ + L+ N + I+ + + I A + E+
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGNISLACEALEK 513
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K + + N+L+ G EE + + + K G+ P+ TY+ +I +C++G
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQK-RGLVPDEFTYSGLIHGYCKTG 572
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ +L +M ++PNA + LL G++K + YE V +LQ M G ++Y
Sbjct: 573 NLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYG 632
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I++L + + E A +L + G+ P+L Y LI G K ++E A L M
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKE 692
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G EP C+ C+ G+ A V + +AKG VP+ T +L+ G + +A
Sbjct: 693 GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752
Query: 377 NELIGLMKKR 386
+L M R
Sbjct: 753 FDLYKEMLDR 762
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 145/354 (40%), Gaps = 39/354 (11%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
GA + P D +S + +A F+A ++ EE++ R D NE + I +
Sbjct: 236 GAGILP----DVYTYSTFIEAHCKARDFDAAKKVFEEMRRR-DCAMNEVTYNVMISGLCR 290
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PKVY- 176
+ ++ A EEM YGL AL+ G +E K + E P +
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350
Query: 177 ---------------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
G++PN Y+ +I+ C+ G +L EM
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ +RP+ + L+ G +++H + ++L M GI V Y I I LC+ S+
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA LL+ M+S G+KPN Y LI G KEGN+ A + MT PD +C+
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
L G E A + +G VP T L+ G + +A++L+ M
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM 584
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 5/281 (1%)
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PD+ F I + +A D A + FEEM + + N ++ G S EE
Sbjct: 241 PDVYTYSTF----IEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 296
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
F E YG+ P++ TY ++ C+ ++L EM ++PN +G L+
Sbjct: 297 AFG-FKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLV 355
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
GF KE K + +L+ M G+ +Y+ I+ LCK+ + A LL M+ G++
Sbjct: 356 DGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLR 415
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ TY L+ G ++ + +GA +L M N G P+ Y + + LCQ GE + A +
Sbjct: 416 PDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNL 475
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+++G P+ L+ G + ++ A E + M K
Sbjct: 476 LEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTK 516
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 2/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ++ A Q +M GL+ + D LL G S +YE+V I G +P
Sbjct: 568 YCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGS-GDKP 626
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ Y VI++ S + + +L E+ + + P+ + L++G K E +L
Sbjct: 627 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLL 686
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M K G+ G+ YN I C+ A+ + D +L++G+ PN TY LI G K
Sbjct: 687 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKN 746
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++ A L+ M + G PD++ + + + E AL + +G+ + S
Sbjct: 747 GDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLF 805
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+LV G K+ E +L+ +M R
Sbjct: 806 NTLVHGFCKRGKLQETEKLLHVMMDR 831
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 36/294 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + +EM K GLR N L+ G + + + E + GI PN +Y
Sbjct: 399 LGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM-RNSGILPNVYSYG 457
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++G+S ++L EM + ++PNA + L+ G KE + L+ M K
Sbjct: 458 IMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA 517
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YN I+ L + R EEA+ + RG+ P+ TY LIHG+ K GNLE A
Sbjct: 518 NVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKA 577
Query: 307 KKLFASMTNGGCEP--DSYCFFMFTYF--------------------------------- 331
+L M N G +P D+Y + YF
Sbjct: 578 DQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRN 637
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + E A V G VP SL++GL I+ + +A L+ M K
Sbjct: 638 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAK 691
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + +A Q M GL + N LL +L + E+ F + GI P
Sbjct: 183 YKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKD-LLRADAMELLWKLKGFMEGAGILP 241
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ I++ C++ D + + EMRR+ N + ++++G + E+
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 301
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M G++ Y + LCK R +EAKALLD M G+KPN+ Y L+ GF KE
Sbjct: 302 EEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKE 361
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A + M + G +P+ + LC+ G+ A K+ + + G P T
Sbjct: 362 GKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421
Query: 361 KSLVTG 366
L+ G
Sbjct: 422 NPLMQG 427
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 13/245 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMID-- 128
D + I + LS++ + +L E++ PDL H++S ++ G + D
Sbjct: 627 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL------HIYSSLISGLCKIADME 680
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ +EM K GL + NAL+ G S + + +F G+ PN TY +
Sbjct: 681 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI-LAKGLVPNCVTYTAL 739
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C++GD + + + EM + I P+A + +L G E + + M G
Sbjct: 740 IDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY 799
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A+ V+++N + CK + +E + LL M+ R I PN T + ++ FGK G L A +
Sbjct: 800 AN-VSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHR 858
Query: 309 LFASM 313
+FA +
Sbjct: 859 VFAEL 863
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 7/238 (2%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQ 144
++N + +S +L+ + D N H++ IV+ ++ ++ A E++K GL
Sbjct: 605 KSNDYEKVSSILQSMLGSGDKPDN---HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 661
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
+ ++L+ G + E+ + E K G+EP YN +I FC SGD S ++
Sbjct: 662 DLHIYSSLISGLCKIADMEKAVGLLDEMAK-EGLEPGIVCYNALIDGFCRSGDISRARNV 720
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+ K + PN + L+ G K D + + M GIA VYN+
Sbjct: 721 FDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSD 780
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
E+A L + M +RG N+ + L+HGF K G L+ +KL M + P++
Sbjct: 781 AADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNA 837
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P N ++K + ++ + M I P+ + + K ++
Sbjct: 203 GLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAA 262
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV + M + A YN+ I LC+ EEA + M+ G+ P+ TY L++G
Sbjct: 263 KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNG 322
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K L+ AK L M+ G +P+ + + G+ A + + ++ G P+
Sbjct: 323 LCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPN 382
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
+L+ GL I ++ A++L+ M K
Sbjct: 383 KIMYDNLIRGLCKIGQLGRASKLLKEMIK 411
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 84/201 (41%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P++ + ++ ++ ++G + ++ M + P LL + E + K+
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
ME GI V Y+ I++ CK + + AK + + M R N TY +I G +
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G +E A M + G PD++ + LC+G + A + G P+
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350
Query: 360 MKSLVTGLASISKVAEANELI 380
+LV G K AEA +++
Sbjct: 351 YGTLVDGFMKEGKTAEAFDIL 371
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 105/269 (39%), Gaps = 33/269 (12%)
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEF-----PKVYGIEPNSETYNKVIKSFCESGD 197
R S DA+++L+ G +++ ++ +F P++ P+++ + ++ S C +
Sbjct: 76 RLSPDAVSSLIFG---GRSHSLHPKLLLDFFYWSRPRI--APPSADAFARLAASLCAASL 130
Query: 198 SSSVYSILAEM-----------------------RRKSIRPNATDFGLLLAGFYKEHKYE 234
+L +M R +S P+ +L+ + K
Sbjct: 131 FPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLDVLVDTYKKTGSVR 190
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ +V+ MM G+A N ++ L + E L M GI P++ TY I
Sbjct: 191 NAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFI 250
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K + + AKK+F M C + + + LC+ G E A + G
Sbjct: 251 EAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLS 310
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLM 383
P T +L+ GL S++ EA L+ M
Sbjct: 311 PDAFTYGALMNGLCKGSRLKEAKALLDEM 339
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 1/261 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
MI A FE M + G+ +V+ NAL+ G +E +++F + G P+ +Y
Sbjct: 202 MILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR-KGCAPSVRSY 260
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +IK C+SG +LAEM K++ P+ + L+ GF ++ + +D K+L+ M
Sbjct: 261 NILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRS 320
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ + Y+I + LCK +EA LL M I+PN+ Y LI G G LE
Sbjct: 321 YGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEA 380
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++LF+++ G +PD + + L +GG A ++ R G +P+ T ++
Sbjct: 381 ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQ 440
Query: 366 GLASISKVAEANELIGLMKKR 386
G + A LI M R
Sbjct: 441 GFLRNGDTSNAGRLIEEMVGR 461
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 146/317 (46%), Gaps = 12/317 (3%)
Query: 74 DRMAFSIAVSKLS-QANHFNAISQLLEELKT--RPDLRQNERFHVHSIVLYGQANM--ID 128
+ + FS ++ LS +A +A+ E +K PD+ +S ++ G M
Sbjct: 46 NHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVI------TYSTIINGLCKMGSTT 99
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+Q ++M++ G + +V + ++ K E +E GI PN TY+ +
Sbjct: 100 MAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN-RGISPNVVTYSSI 158
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ FC G S+ S+ +M +++ P+ F +L+ G KE + V + M + G+
Sbjct: 159 LHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV 218
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
VN YN + C + +EA+ L + M+ +G P++ +Y LI G K G ++ AK
Sbjct: 219 EPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKG 278
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L A M++ PD+ + CQ G + A K+ + G +P T ++ GL
Sbjct: 279 LLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLC 338
Query: 369 SISKVAEANELIGLMKK 385
+ EA EL+ M++
Sbjct: 339 KQGHLDEAFELLKAMQE 355
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 2/290 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+I V LS+ +Q + E + N + + Y + +D A +
Sbjct: 186 DTVTFNILVDGLSKEGMILE-AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M + G SV + N L+ G S +E K + E + P++ TY+ ++K FC
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH-KALTPDTVTYSTLMKGFC 303
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G +L EMR + P+ + ++L G K+ ++ ++L+ M++ I +
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIF 363
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I IQ +C + E A+ L + +GI+P++ TY +I G K G A +LF M
Sbjct: 364 IYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDM 423
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
GC P+S + + + G+ A ++ + +G+ ST + L
Sbjct: 424 AVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S ++ L + QLL++++ + + N + I + +I AM+
Sbjct: 81 DVITYSTIINGLCKMGSTTMAIQLLKKMEEK-GCKPNVVVYSTIIDSLCKDKLITEAMEF 139
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EM G+ +V +++L G C L ++ E +F + + + P++ T+N ++
Sbjct: 140 LSEMVNRGISPNVVTYSSILHGFCNLGRS-NEATSLFKQMVE-RNVMPDTVTFNILVDGL 197
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ G + M K + PN + L+ G+ + + ++ K+ +M + G A V
Sbjct: 198 SKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSV 257
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YNI I+ CK R +EAK LL M + + P+ TY L+ GF ++G + A+KL
Sbjct: 258 RSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEE 317
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + G PD + + LC+ G + A ++ +A P+ L+ G+ + K
Sbjct: 318 MRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGK 377
Query: 373 VAEANEL 379
+ A EL
Sbjct: 378 LEAAREL 384
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 3/252 (1%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCE 194
MD +R V L +L+ C N++ F+ ++ G++PN T++ ++
Sbjct: 1 MDLSNIRPDVYTL-TILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSS 59
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ EM + P+ + ++ G K ++L+ ME+ G V V
Sbjct: 60 KAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y+ I SLCK K EA L M++RGI PN+ TY ++HGF G A LF M
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
PD+ F + L + G A V + KG P+ +T +L+ G S S++
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239
Query: 375 EANELIGLMKKR 386
EA +L +M ++
Sbjct: 240 EAQKLFNIMVRK 251
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 4/262 (1%)
Query: 128 DH---AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
DH A M K GL+ + + LL G + ++F E K+ G EP+ T
Sbjct: 26 DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKM-GYEPDVIT 84
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ +I C+ G ++ +L +M K +PN + ++ K+ + + L M
Sbjct: 85 YSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMV 144
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI+ V Y+ + C L RS EA +L M+ R + P+ T+ L+ G KEG +
Sbjct: 145 NRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMIL 204
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A+ +F +M G EP+ + C + + A K+ + KG P + L+
Sbjct: 205 EAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILI 264
Query: 365 TGLASISKVAEANELIGLMKKR 386
G ++ EA L+ M +
Sbjct: 265 KGHCKSGRIDEAKGLLAEMSHK 286
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 1/203 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A EM L + L+ G ++ +++ E + YG+ P+ TY+
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM-RSYGLLPDLMTYS 331
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ C+ G + +L M+ I PN + +L+ G K E ++ +
Sbjct: 332 IVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVK 391
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI V Y + I L K S EA L M G PN TY +I GF + G+ A
Sbjct: 392 GIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNA 451
Query: 307 KKLFASMTNGGCEPDSYCFFMFT 329
+L M G DS F M +
Sbjct: 452 GRLIEEMVGRGFSADSSTFQMLS 474
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 4/327 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD A+SI + + + + N +LLEE+K R + F + Q NM++ A++
Sbjct: 293 LDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE-ALR 351
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM G ++ +L+ G N + +F + + G+ PN TY+ +I+
Sbjct: 352 LKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE-DGLFPNKVTYSVLIEGC 410
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C SG+ + +M+ I P+ + LL G+ K +E+ K+ CG+A+ +
Sbjct: 411 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVAN-I 469
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YNI + LCK + +EA +LLD M+++G+ PN+ +Y +I G ++GN++ A +F+
Sbjct: 470 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 529
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M +P+ + + + G+ E AL + ++ P T +++ GL + +
Sbjct: 530 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 589
Query: 373 VAEA-NELIGLMKKRFPKSGDMWNAAL 398
++EA ++L +++ F S +N+ +
Sbjct: 590 MSEARDKLKNFLEEGFIPSCMTYNSIV 616
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 35/299 (11%)
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-- 171
+S+++ G N I+ A + + +M G+ SV +N+LL G + + +EE ++F E
Sbjct: 403 YSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV 462
Query: 172 ---FPKVY----------------------------GIEPNSETYNKVIKSFCESGDSSS 200
++ G+ PN +YN +I C G+
Sbjct: 463 DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDM 522
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S+ ++M + ++PN + +L+ G +K+ E + M IA +N I
Sbjct: 523 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 582
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK+ + EA+ L L G P+ TY ++ GF KEGN++ A ++ M G P
Sbjct: 583 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSP 642
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + C+ + ALK KG + +L+ G + A +L
Sbjct: 643 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 701
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 99/246 (40%), Gaps = 1/246 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G S N+++ G I N + ++ E + +G+ PN TY +I FC+S
Sbjct: 604 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE-FGVSPNVVTYTSLINGFCKSNRIDL 662
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
EMR K + + T + L+ GF K E + + + G++ VYN I
Sbjct: 663 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 722
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L E A M++ I +L TY LI G KEG L A L+ M + G P
Sbjct: 723 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 782
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D F + LC G+ E A K+ K P +L+ G + EA L
Sbjct: 783 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 842
Query: 381 GLMKKR 386
M R
Sbjct: 843 DEMLDR 848
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 13/287 (4%)
Query: 106 DLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCI----LS 159
DL+ N +SI++ G D A+ F++M + + N ++ G +S
Sbjct: 534 DLKPN--VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMS 591
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+ +++K E G P+ TYN ++ F + G+ S ++ EM + PN
Sbjct: 592 EARDKLKNFLEE-----GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVT 646
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ GF K ++ + K M + G+ V Y+ I CK + E A+ L +L
Sbjct: 647 YTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELL 706
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
G+ PN Y +I GF N+E A + M N D + L + G
Sbjct: 707 EVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLV 766
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A + ++KG VP T LV GL + ++ A +++ M ++
Sbjct: 767 FASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 813
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 6/228 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ ++N ID A++T +EM + GL V A +AL+ G ++ E + +F E +V G+ P
Sbjct: 654 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV-GLSP 712
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N YN +I F + + + +M I + + L+ G KE + +
Sbjct: 713 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 772
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M GI + +++ + LC + E A+ +L+ M + + P++ Y LI G+ +E
Sbjct: 773 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 832
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
GNL+ A L M + G PD TY + G+++ + R S
Sbjct: 833 GNLKEAFTLHDEMLDRGLVPDD-----VTYDILINGKFKGDRSLSRPS 875
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 1/240 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ + EM ++G+ +V +L+ G S + + E + G+E + Y+
Sbjct: 625 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM-REKGLELDVTAYS 683
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ D S + E+ + PN + +++GF + E + M
Sbjct: 684 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 743
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + Y I L K R A L MLS+GI P++ T+ L++G +G LE A
Sbjct: 744 RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 803
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+K+ M P + + G + A + + +G VP T L+ G
Sbjct: 804 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 110/276 (39%), Gaps = 35/276 (12%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
NMI + +M G+ ++ ++ C+ EE + F E K G++ ++
Sbjct: 239 NMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRE-TKERGVKLDAGA 297
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ +I++ C+ +S+ +L EM+ + P+ F ++ + + ++ + M
Sbjct: 298 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 357
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
CG + V ++ C + A L + + G+ PN TY LI G GN+E
Sbjct: 358 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 417
Query: 305 GAKKLFASMTNGGCEP-----------------------------DSYCFFMFTY----- 330
A +L+ M G P D +FTY
Sbjct: 418 KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMS 477
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LC+GG+ + A + + +G VP+ + ++ G
Sbjct: 478 WLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 513
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F LL + + ++ E+ M + V NI + +L + E + L + M+
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
RGI + T ++ KEG +E A++ F G + D+ + + +C+
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
L++ +GWVP +T S++ + + EA
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEA 349
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 125/265 (47%), Gaps = 5/265 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A ++M + + N+L+ G + S + E RI E + G PN TY+
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSR-DGQRPNVVTYS 361
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+SG + I M + +PNA+ +G LL G+ E D+ V +M +
Sbjct: 362 MLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQN 421
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ G +V+NI I + CK R +EA + M +G P++ Y +I G K G L+ A
Sbjct: 422 GMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDA 481
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
F M + G PD F + G++E A ++ M +G P+ +T S++
Sbjct: 482 MSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDK 541
Query: 367 LASISKVAEANELIGLMKKRFPKSG 391
L KV EA +L LM P++G
Sbjct: 542 LFKEGKVTEARKLFDLM----PRAG 562
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 164 EVKRIFTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+V + +T F K+ +GI PN T N VI C+ ++L +M + I PN T +
Sbjct: 267 DVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYN 326
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ G+ ++ + ++L+ M + G V Y++ I LCK EA+ + + M+
Sbjct: 327 SLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQS 386
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G KPN TY L+HG+ EGNL + M G P + F + Y C+ G + A
Sbjct: 387 GQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEA 446
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+G++P +++ GL I ++ +A
Sbjct: 447 SLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDA 481
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 12/276 (4%)
Query: 123 QANMIDHAMQTFEEMDKYGLR-QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
A ++ ++ K GLR Q+V L C + + + + P++ G P+
Sbjct: 156 DAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPEL-GCTPD 214
Query: 182 SETYNKVIKSFC---ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+Y ++K C + +++ + ++AE + PN + ++ GF+KE DVGK
Sbjct: 215 VFSYTTLLKGLCAEKKCEEAAELIHMMAE-DGDNCPPNVVSYTTVIHGFFKEG---DVGK 270
Query: 239 VLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ K GI V N I LCK++ ++A+A+L M+ I PN TY LIH
Sbjct: 271 AYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIH 330
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+ G A ++ M+ G P+ + M LC+ G + A ++ + + G P
Sbjct: 331 GYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKP 390
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+ ST SL+ G A+ + + N + LM + + G
Sbjct: 391 NASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPG 426
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D AM F +M GL + N L+ G L +E+ + +F E GI PN T+N
Sbjct: 478 LDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMD-RGIPPNVNTFN 536
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + G + + M R +PN + ++ G++ + +V K+L M
Sbjct: 537 SMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLI 596
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ +N LLDGM+S G+KP++ T K LI ++G +E
Sbjct: 597 GLKPTAVTFN----------------TLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDI 640
Query: 307 KKLFASM 313
LF M
Sbjct: 641 LTLFREM 647
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 93/241 (38%), Gaps = 21/241 (8%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFT 170
HV +I +Y + +D A TF +M + G + A ++ G C + + + + R
Sbjct: 428 HVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQ 487
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
G+ P+ T+N +I F G + EM + I PN F ++ +KE
Sbjct: 488 MIDD--GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKE 545
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K + K+ +M + G V YN I E LLD ML G+KP T+
Sbjct: 546 GKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTF 605
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
L+ G M + G +PD C+ G E L + R +
Sbjct: 606 NTLLDG----------------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLG 649
Query: 351 K 351
K
Sbjct: 650 K 650
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 141/306 (46%), Gaps = 8/306 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHAM 131
D +A++ ++ + + Q+ EE+ R ++ +H + G ++ A
Sbjct: 336 DHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGD---LEKAE 392
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F EM G++ + N L+ G +N E+ + E K + N+ ++
Sbjct: 393 DLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKK-ENLTANAYMCGAIVNG 451
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C GD + + EM ++PN + ++ G KE ++E+ K+L +M+ G++
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPD 511
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN I CK + EE K+ L M+++G+KPN+ TY IHG+ + G ++ A++ F
Sbjct: 512 VFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFI 571
Query: 312 SMTNGGCEP-DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G P D C + + C+ G A R + +G +P T L+ GL+
Sbjct: 572 EMLDSGIAPNDVICTDLIDGY-CKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630
Query: 371 SKVAEA 376
K+ EA
Sbjct: 631 GKLQEA 636
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + F+EM +GL+ ++ ++ G + +EE +I K G+ P+ YN
Sbjct: 458 LTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVM-KDQGLSPDVFCYN 516
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI FC++G S L EM K ++PN +G + G+ + + + + M
Sbjct: 517 TVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS 576
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA + I CK + +A A ML +G+ P++ T+ LIHG K G L+ A
Sbjct: 577 GIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEA 636
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+F+ + + G PD + + LC+ G+ + A ++ KG P+ T +L+ G
Sbjct: 637 MGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALING 696
Query: 367 LASISKVAEANEL 379
L + ++A+A EL
Sbjct: 697 LCKLGEIAKAREL 709
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Query: 172 FPKVY-----GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F KVY I P+ TY +I ++C G +L +M K PN + +++AG
Sbjct: 217 FWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAG 276
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ ++ ++ + M G+ +Y I C+ KRS E K++LD M + G+KP+
Sbjct: 277 LCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPD 336
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
Y LI+GF K+ ++ GA ++ M + +++ ++ + LC+ G+ E A +
Sbjct: 337 HVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFS 396
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G P T L+ G + + +A EL+ +KK
Sbjct: 397 EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKE 436
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 127/294 (43%), Gaps = 8/294 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
+ +S+ ++ L +A + +L + + L N ++++ ++ G +
Sbjct: 268 VTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDN---YIYATLIDGFCRQKRSTEGKSM 324
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSF 192
+EM GL+ A AL+ G + + ++ E F + I+ N+ TY +I
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFAR--KIKLNTFTYYALIHGL 382
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ GD + +EM I+P+ + L+ G+YK E ++L ++K + +
Sbjct: 383 CKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANA 442
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ + LC A L M+S G+KPN+ Y ++ G KEG E A K+
Sbjct: 443 YMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGV 502
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M + G PD +C+ C+ G+ E +AKG P+ T + + G
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 6/213 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P++ Y +I FC S+ S+L EM ++P+ + L+ GF K+ D+
Sbjct: 297 GLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQ---SDI 353
Query: 237 GKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
G Q+ E+ I Y I LCK+ E+A+ L M GIKP++ TY L
Sbjct: 354 GGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCL 413
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G+ K N+E A +L + ++Y LC G+ A ++ + ++ G
Sbjct: 414 IEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGL 473
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ ++V GL + EA +++G+MK +
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQ 506
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 1/204 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +T++ +I ++G + +E+ K + P+ + L++ KE +
Sbjct: 612 GVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAA 671
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M K GI + YN I LCKL +A+ L DG+ +G+ N TY +I G
Sbjct: 672 FELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAG 731
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K NL A +LF M G PDS+ + C+ G E AL + + +G +
Sbjct: 732 YCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IAS 790
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
+L+ G + K+ EA +L+
Sbjct: 791 TPAFNALIDGFFKLGKLIEAYQLV 814
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 1/257 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A++ M GL V N +++G + EE K E G++PN TY
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI-AKGLKPNVYTYGA 552
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
I +C +G+ + EM I PN L+ G+ K+ + M G
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V +++ I L K + +EA + +L +G+ P++ TY LI KEG+L+ A
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L M G P+ + LC+ GE A ++ KG + T +++ G
Sbjct: 673 ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732
Query: 368 ASISKVAEANELIGLMK 384
+ + EA +L MK
Sbjct: 733 CKSANLTEAFQLFHGMK 749
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 113/281 (40%), Gaps = 2/281 (0%)
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
L +N + I Y ++ + A Q F M G+ AL+ GC + N E+
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+F + GI ++ +N +I F + G Y ++ +M I PN + +L+
Sbjct: 778 SLFLGMVE-EGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEY 835
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++ ++ M+K + V Y + ++ R E +L D M++RGIKP+
Sbjct: 836 HCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPD 895
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ ++ KEGN A KL M + G + + LC+ LKV
Sbjct: 896 DLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLD 955
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
+G +T +LV + EA ++ M + F
Sbjct: 956 EVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSF 996
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 2/314 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD ++ +S L + + ++L + +R D N + I + N ++ A +
Sbjct: 335 LDVYTYNSLISGLCKLGEIDEAVEILHHMVSR-DCEPNTVTYNTLIGTLCKENHVEAATE 393
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+ G+ V N+L+ G L+ N E +F E K G +P+ TY+ +I+S
Sbjct: 394 LARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM-KEKGCDPDEFTYSILIESL 452
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C +L EM N + L+ G K ++ D + ME G++
Sbjct: 453 CSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSS 512
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I LCK KR EEA L+D M+ G+KP+ TY ++ F ++G+++ A + +
Sbjct: 513 VTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQN 572
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
MT GCEPD + LC+ G + A K+ R+ KG V ++ L +
Sbjct: 573 MTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632
Query: 373 VAEANELIGLMKKR 386
EA L M ++
Sbjct: 633 TKEAMRLFREMMEK 646
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 9/316 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +SI + L LL+E++ R V++ ++ G + N + A
Sbjct: 441 DEFTYSILIESLCSERRLKEALMLLKEMELSGCARN---VVVYNTLIDGLCKNNRVGDAE 497
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F++M+ G+ +S N L+ G SK EE ++ + + G++P+ TY ++K
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQM-IMEGLKPDKFTYTTMLKY 556
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ GD I+ M P+ +G L+ G K + + K+L+ ++ G+
Sbjct: 557 FCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLT 616
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN-LEGAKKLF 310
YN IQ+LCK KR++EA L M+ +G P++ TYK + G G ++ A
Sbjct: 617 PQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFT 676
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G P+ F LC +T +++ M KG T S++ G I
Sbjct: 677 VEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSET--SIIRGFLKI 734
Query: 371 SKVAEANELIGLMKKR 386
K +A +G + R
Sbjct: 735 QKFNDALANLGAILDR 750
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 137/316 (43%), Gaps = 4/316 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNA-ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
P+D F I + + ++H +A I+ L ++ ++ + RF+ ++ L +AN +
Sbjct: 124 PVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLV 183
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+M + V N L+ + + + P YG+ P+ +T+ +++
Sbjct: 184 ETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPN-YGLRPDEKTFTTLMQ 242
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
F E D I M + +L+ G KE + E+ + + E+ G
Sbjct: 243 GFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCP 300
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+N + LC+ ++ ++D ML +G + ++ TY LI G K G ++ A ++
Sbjct: 301 DQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEIL 360
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + CEP++ + LC+ E A ++ R +KG +P T SL+ GL
Sbjct: 361 HHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLT 420
Query: 371 SKVAEANELIGLMKKR 386
S A EL MK++
Sbjct: 421 SNREIAMELFEEMKEK 436
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 143/336 (42%), Gaps = 4/336 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
L ++N ++++ +A P D F+I + L +A+ +LE++ LR
Sbjct: 173 LLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNY-GLR 231
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
+E+ + + + ++ A++ E M + G + ++N L+ G EE R
Sbjct: 232 PDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRF 291
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
E G P+ T+N ++ C +G ++ M K + + L++G
Sbjct: 292 IYE---EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K + ++ ++L M YN I +LCK E A L + S+G+ P++
Sbjct: 349 KLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVC 408
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
T+ LI G N E A +LF M GC+PD + + + LC + AL + +
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G + +L+ GL ++V +A ++ M+
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQME 504
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 10/302 (3%)
Query: 92 NAISQLLEELKTRPDLRQNER--------FHVHSIVLYG--QANMIDHAMQTFEEMDKYG 141
N + Q L LK D Q R +I+++G +A I A + +EM ++G
Sbjct: 848 NCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHG 907
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+ Q+V N ++ G ++ + +F E + P+ TY+ ++ S +SG
Sbjct: 908 VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 967
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
++ +M K PN + LL G K K ++ +LQ M + G + + YN I
Sbjct: 968 CRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 1027
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
CKL R +EA LL+ M+ G +PN+ TY L+ F K G E A L M G P+
Sbjct: 1028 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 1087
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + C+ E E A ++ + + KG VP+ + +++ GL +KV E L+
Sbjct: 1088 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 1147
Query: 382 LM 383
M
Sbjct: 1148 QM 1149
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 2/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A I A + F+EM++ GL+ ++L G + + F E K P+S
Sbjct: 173 RAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDS 230
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I +S +L EM PN + +L GF K ++ E+ +L+
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G V Y I LCKL + +EA ++D M+ RG +PN+ TY L+ GF + G+
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+GA +L MT G P++ + + C+ + E A +V + + G P +
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
+++G K+ EA++L+ M +R
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRR 434
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 158/345 (45%), Gaps = 17/345 (4%)
Query: 46 IARLKSESNPFRIL--DICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT 103
+ RLK + ++ +CC ++ F+I + L +A +LL+E+
Sbjct: 854 LLRLKRPKDALQVYRNKLCCSPNM--------FTFTILIHGLCRAGDIGTAYELLKEMP- 904
Query: 104 RPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYG-LRQSVDALNALLLGCILSK 160
R + QN +H++V+ G A +D A++ F+EM++ G V + ++ + S
Sbjct: 905 RHGVPQN--VILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSG 962
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
++ R+ + G PN TY+ ++ C++G ++L M R PN +
Sbjct: 963 KVDDACRLVEDMVS-KGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 1021
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
++ G K + ++ +L+ M G V Y + + + CK ++E+A L++ M+
Sbjct: 1022 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 1081
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G PNL TY L+ F K+ +E A +L +SM GC P+ + LC+ +
Sbjct: 1082 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 1141
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ + ++ VP T +++ + +V A EL L+++
Sbjct: 1142 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 1186
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 153/350 (43%), Gaps = 37/350 (10%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D ++++ ++ L + + + ++++++ R + N + + + + +D A+
Sbjct: 297 PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR-GCQPNVITYGTLVDGFCRVGDLDGAV 355
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +M + G R + N ++ + E ++ + G P++ Y+ +I
Sbjct: 356 ELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT-GCPPDAINYSTIISG 414
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC++G + +L +M R+ RP+ L+ K + ++L+M A
Sbjct: 415 FCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPD 474
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGML-------------------------------- 279
V Y+I I +LCK KR EA++ LD M+
Sbjct: 475 VVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFD 534
Query: 280 ---SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+ G+ P++ TY +IH F K+ NL+ A K+ M C PD + LC+ G
Sbjct: 535 RMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A V + + G P+ T +L+ GL I+KV +A E++ +M+K+
Sbjct: 595 TVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 138/326 (42%), Gaps = 9/326 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR----PDLRQNERFHVHSIVLYGQANMI 127
P + + ++ + L A ++ +L +E++ PD+ V S+V G+ +
Sbjct: 909 PQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI-VDSLVKSGK---V 964
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + E+M G +V ++LL G + +E + + G PN TYN
Sbjct: 965 DDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR-SGCSPNIVTYNT 1023
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G Y +L EM +PN + +LL F K K ED ++++M + G
Sbjct: 1024 IIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKG 1083
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YN + CK E A LL M+ +G PN+ +Y +I G K +
Sbjct: 1084 YVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGV 1143
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M + C PD F +C+ + A ++ G P+ T SLV GL
Sbjct: 1144 LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGL 1203
Query: 368 ASISKVAEANELIGLMKKRFPKSGDM 393
+ +A L+ M ++ S D+
Sbjct: 1204 CKSRRFDQAEYLLREMTRKQGCSPDI 1229
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 11/311 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYG--QANMIDH 129
D + +S +S +A +L +E+ R+ + H VH +L G A
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMN-----RKGLKAHAGVHKSILRGLCDAGQCSD 214
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F EM K SV N ++ G S ++ R+ E G PN +YN V+
Sbjct: 215 AVLHFREMSKTCPPDSV-TYNTMINGLSKSDRLDDAIRLLEEMVD-NGFAPNVFSYNTVL 272
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC++ + +L +M + P+ + ++ G K + ++ +V+ M + G
Sbjct: 273 HGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 332
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y + C++ + A L+ M RG +PN TY +++H F + ++E A ++
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M GC PD+ + C+ G+ A + + +G P + + +L+ L
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452
Query: 370 ISKVAEANELI 380
+ + A EL+
Sbjct: 453 AAAIDSAQELL 463
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYED 235
G PN TYN ++ C+S +L EM RK P+ + ++ G K + +
Sbjct: 1188 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 1247
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
K+ M G+A Y+I I SLCK + +EA +L+ ML G P TY LI
Sbjct: 1248 AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 1307
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GF K GNL+ A ++ + + G PD F +F +L + G A ++ + G VP
Sbjct: 1308 GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 1367
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ G S +A +L +M++
Sbjct: 1368 DTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 108/263 (41%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+++ +D A++ EEM G +V + N +L G N E E G P+
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHG-FCKANRVENALWLLEQMVTRGCPPDV 300
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+Y VI C+ ++ +M ++ +PN +G L+ GF + + ++++
Sbjct: 301 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 360
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G YN + C+ E A +L M+ G P+ Y +I GF K G
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L A L M GC PD C LC+ ++A ++ R S+ P
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480
Query: 363 LVTGLASISKVAEANELIGLMKK 385
L+ L ++ EA + +M K
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVK 503
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 129/328 (39%), Gaps = 11/328 (3%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMID 128
P D + +S +S +A LLE++ RPD+ I +A ID
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTL----IDALCKAAAID 457
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + V A + L+ +K E + K P+ TYN V
Sbjct: 458 SAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVK-NRCYPDVVTYNSV 516
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+S + + + MR + P+ + +++ F K++ + K+L+ M++
Sbjct: 517 VDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKC 576
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y+ I LCK ++A + ML G PNL TY LI G K +E A +
Sbjct: 577 VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAE 636
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ M C PDS + LC E A +V R KG +P T +L+ L
Sbjct: 637 MLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQ 696
Query: 369 SISKVAEANELIGLMKKRFPKSGDMWNA 396
+ + +L+ M+ WNA
Sbjct: 697 KTNNLELVEQLLKEMEA---TEEGQWNA 721
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F + + G ++ N+L+ G S+ +++ + + E + G P+ TYN
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+S Y + +M + P+ + ++++ K ++ VL++M K
Sbjct: 1234 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 1293
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G G Y I CK ++A +L +LS+G P++ T+ I K G L A
Sbjct: 1294 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 1353
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L +M G PD+ + C E A+ + G P +T +LV
Sbjct: 1354 GELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGH 1413
Query: 367 LAS 369
L
Sbjct: 1414 LVD 1416
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 107/255 (41%), Gaps = 6/255 (2%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD-KYGLRQSVDALNALLLG 155
L++E P+L VH + ++ D A EM K G + N ++ G
Sbjct: 1183 LIQESGCTPNLVTYNSL-VHGLC---KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG 1238
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
SK + ++F + G+ P+ TY+ VI S C+ ++L M + P
Sbjct: 1239 LCKSKRVDRAYKLFLQMLS-DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDP 1297
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
A +G L+ GF K + ++LQ++ G V ++I I L K R +A LL
Sbjct: 1298 GAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELL 1357
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
+ ML G+ P+ TY L+ GF E A LF M GCEPD+ + L
Sbjct: 1358 ETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDK 1417
Query: 336 GEYETALKVCRASMA 350
Y+ L SM
Sbjct: 1418 KSYKDLLAEVSKSMV 1432
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/416 (19%), Positives = 142/416 (34%), Gaps = 105/416 (25%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR----PDLRQNERFHVHSIVLYG--QANMIDH 129
+ ++ V L ++ F+ LL E+ + PD+ ++ V+ G ++ +D
Sbjct: 1194 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII------TYNTVIDGLCKSKRVDR 1247
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F +M GL D ++++ + + + E G +P + TY +I
Sbjct: 1248 AYKLFLQMLSDGLAPD-DVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 1306
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC++G+ IL + K P+ F + + K + G++L+ M + G+
Sbjct: 1307 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 1366
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL---------------- 293
YN ++ C +E+A L + M G +P+ TY L
Sbjct: 1367 PDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAE 1426
Query: 294 ------------------------------------IHGFGKEGNLEGAKKLFASMTN-- 315
+ FGK G+ + A+K+F M
Sbjct: 1427 VSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRN 1486
Query: 316 -----------------------------GGCEPDSYCFFMFTYFLCQGGEYETALK--- 343
G EPD+ F C G + A+
Sbjct: 1487 VVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFV 1546
Query: 344 -VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ R + V HFS + L L + V EA +L+ M + S WN L
Sbjct: 1547 SISRDYGLEPGVDHFSCVIDL---LGRLGLVNEAEDLMLGMPCK--PSAATWNCLL 1597
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 4/327 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD A+SI + + + + N +LLEE+K R + F + Q NM++ A++
Sbjct: 253 LDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVE-ALR 311
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM G ++ +L+ G N + +F + + G+ PN TY+ +I+
Sbjct: 312 LKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE-DGLFPNKVTYSVLIEGC 370
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C SG+ + +M+ I P+ + LL G+ K +E+ K+ CG+A+ +
Sbjct: 371 CNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVAN-I 429
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YNI + LCK + +EA +LLD M+++G+ PN+ +Y +I G ++GN++ A +F+
Sbjct: 430 FTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSD 489
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M +P+ + + + G+ E AL + ++ P T +++ GL + +
Sbjct: 490 MLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 549
Query: 373 VAEA-NELIGLMKKRFPKSGDMWNAAL 398
++EA ++L +++ F S +N+ +
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIV 576
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 35/299 (11%)
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-- 171
+S+++ G N I+ A + + +M G+ SV +N+LL G + + +EE ++F E
Sbjct: 363 YSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV 422
Query: 172 ---FPKVY----------------------------GIEPNSETYNKVIKSFCESGDSSS 200
++ G+ PN +YN +I C G+
Sbjct: 423 DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDM 482
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S+ ++M + ++PN + +L+ G +K+ E + M IA +N I
Sbjct: 483 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 542
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK+ + EA+ L L G P+ TY ++ GF KEGN++ A ++ M G P
Sbjct: 543 GLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSP 602
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + C+ + ALK KG + +L+ G + A +L
Sbjct: 603 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 661
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 99/246 (40%), Gaps = 1/246 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G S N+++ G I N + ++ E + +G+ PN TY +I FC+S
Sbjct: 564 GFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCE-FGVSPNVVTYTSLINGFCKSNRIDL 622
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
EMR K + + T + L+ GF K E + + + G++ VYN I
Sbjct: 623 ALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 682
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L E A M++ I +L TY LI G KEG L A L+ M + G P
Sbjct: 683 GFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVP 742
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D F + LC G+ E A K+ K P +L+ G + EA L
Sbjct: 743 DIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLH 802
Query: 381 GLMKKR 386
M R
Sbjct: 803 DEMLDR 808
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 5/283 (1%)
Query: 106 DLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
DL+ N +SI++ G D A+ F++M + + N ++ G
Sbjct: 494 DLKPN--VVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMS 551
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E + F + G P+ TYN ++ F + G+ S ++ EM + PN + L
Sbjct: 552 EARDKLKNFLE-EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF K ++ + K M + G+ V Y+ I CK + E A+ L +L G+
Sbjct: 611 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
PN Y +I GF N+E A + M N D + L + G A
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ ++KG VP T LV GL + ++ A +++ M ++
Sbjct: 731 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 773
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 6/228 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ ++N ID A++T +EM + GL V A +AL+ G ++ E + +F E +V G+ P
Sbjct: 614 FCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV-GLSP 672
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N YN +I F + + + +M I + + L+ G KE + +
Sbjct: 673 NRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLY 732
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M GI + +++ + LC + E A+ +L+ M + + P++ Y LI G+ +E
Sbjct: 733 MEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFRE 792
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
GNL+ A L M + G PD TY + G+++ + R S
Sbjct: 793 GNLKEAFTLHDEMLDRGLVPDD-----VTYDILINGKFKGDRSLSRPS 835
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 1/240 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ + EM ++G+ +V +L+ G S + + E + G+E + Y+
Sbjct: 585 IDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM-REKGLELDVTAYS 643
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ D S + E+ + PN + +++GF + E + M
Sbjct: 644 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 703
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + Y I L K R A L MLS+GI P++ T+ L++G +G LE A
Sbjct: 704 RIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENA 763
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+K+ M P + + G + A + + +G VP T L+ G
Sbjct: 764 RKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 110/276 (39%), Gaps = 35/276 (12%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
NMI + +M G+ ++ ++ C+ EE + F E K G++ ++
Sbjct: 199 NMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRE-TKERGVKLDAGA 257
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ +I++ C+ +S+ +L EM+ + P+ F ++ + + ++ + M
Sbjct: 258 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 317
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
CG + V ++ C + A L + + G+ PN TY LI G GN+E
Sbjct: 318 NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 377
Query: 305 GAKKLFASMTNGGCEP-----------------------------DSYCFFMFTY----- 330
A +L+ M G P D +FTY
Sbjct: 378 KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMS 437
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LC+GG+ + A + + +G VP+ + ++ G
Sbjct: 438 WLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 473
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 66/157 (42%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F LL + + ++ E+ M + V NI + +L + E + L + M+
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
RGI + T ++ KEG +E A++ F G + D+ + + +C+
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
L++ +GWVP +T S++ + + EA
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEA 309
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 34/293 (11%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE--------- 171
Y +A +D A+ TF M+KYG+ ++ A N+LL SKN + + IF +
Sbjct: 150 YARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDA 209
Query: 172 ---------------FPK---VY------GIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
PK VY G +P+ TY ++ + C++G ++ +
Sbjct: 210 KTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQD 269
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + +P + +L+ + + + ED MEK GI V VYN I + CK+K+
Sbjct: 270 MSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKK 329
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
E A ++D M GI PN T+ +++ G + A ++F SM C+PDS + M
Sbjct: 330 FENAFRVMDDMQGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKR-CKPDSDTYTM 388
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ + E ALKV + K ++P T L+ GL +V++A L+
Sbjct: 389 MIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLL 441
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
YG+ N +N ++ + C+S + I +M + P+A + +LL G+ +
Sbjct: 169 YGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPSLPK 227
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ +V M G + Y I + +LCK R EEA ++ M SRG +P Y L+H
Sbjct: 228 MREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVH 287
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+G + +E A F M G PD + C+ ++E A +V G P
Sbjct: 288 TYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISP 347
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+ T ++ L S+ K EA + M KR D +
Sbjct: 348 NSRTWNIILNTLISLGKDDEAYRVFRSMIKRCKPDSDTYT 387
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+Y+ V+ S + ++ ++A MR++ + N FG+++ + + K ++ +M
Sbjct: 108 SYHTVVTSLAKIRQYQLMWDVVAIMRKEGV-ANVETFGIIMRKYARAQKLDEAVYTFNVM 166
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
EK G+A + +N + +LCK K +A+ + D M +R P+ TY L+ G+G+ +L
Sbjct: 167 EKYGVAHNLAAFNSLLSALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPSL 225
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+++++ M GC+PD + + LC+ G E A+ V + ++G P
Sbjct: 226 PKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQP 277
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQA 124
LA D + + I V L + +++++ +R Q F ++SI++ YG
Sbjct: 236 LAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRG--CQPTTF-IYSILVHTYGVD 292
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
I+ A+ F +M+K G+ V NAL+ K +E R+ + + +GI PNS T
Sbjct: 293 MRIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDM-QGHGISPNSRT 351
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N ++ + G Y + M ++ +P++ + +++ F + K E KV + M
Sbjct: 352 WNIILNTLISLGKDDEAYRVFRSMIKRC-KPDSDTYTMMIKMFCENDKIEMALKVWKYMR 410
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
++ +++ I LC +A LL+ M+ +GI+P T+ L KEG +
Sbjct: 411 LKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKD 470
Query: 305 GAKKLFASMTNGGCEP 320
L M EP
Sbjct: 471 VLDFLVEKMKILAQEP 486
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 24/321 (7%)
Query: 63 CGASLAPES------------PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDL 107
CGA PE+ P+DR+ ++ + +L EE+ R PD+
Sbjct: 476 CGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI 535
Query: 108 RQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
+ ++ +L G N+ +D A++ ++E GL ++ ++ G + E+V
Sbjct: 536 ------YTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ +F E +E NS YN +IK+ C++G+ ++ +L M+ K I PN + L+
Sbjct: 590 ENLFNELLS-KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 648
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G ED ++ M K G V Y I CKL + + A++ M+S I P
Sbjct: 649 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 708
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N TY +I G+ K GN+E A L M G PD + + T C+ + + A KVC
Sbjct: 709 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVC 768
Query: 346 RASMAKGWVPHFSTMKSLVTG 366
+G T +LV G
Sbjct: 769 DQMATEGLPVDEITYTTLVHG 789
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 17/308 (5%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG---LRQSVDALNALL 153
LL T P L+ F + S+V +AN + + F M + + + +NAL
Sbjct: 176 LLARKGTFPSLKTC-NFXLSSLV---KANEFEKCCEVFRVMSEGACPDVFSFTNVINALC 231
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G E +F + K+ GI PN TYN +I C++G + + + +M K +
Sbjct: 232 KG----GKMENAIELFMKMEKL-GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 286
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+PN +G L+ G K + ++ V +L M G V V+N I CK+ E A
Sbjct: 287 QPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALK 346
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG--CEPDSYCFFMFTYF 331
+ D M+S+ I P T L+ GF K +E A+ + + G PD+ C+ + ++
Sbjct: 347 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN-CYSV-VHW 404
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL-IGLMKKRFPKS 390
LC+ Y +A + + +++ + P + LV GL K EA EL L++K P S
Sbjct: 405 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 464
Query: 391 GDMWNAAL 398
NA +
Sbjct: 465 KVTSNALI 472
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 145/335 (43%), Gaps = 14/335 (4%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHF-NAISQLLEE-LKTRPDLRQNERF 113
+I D+ ++ P S + + K Q H NA+ ++L L PD
Sbjct: 345 LKIKDVMISKNITPTS-VTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD------- 396
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMD-KYGLRQSVDALNALLLG-CILSKNYEEVKRIFTE 171
+ +S+V + H+ F +M R S L L+ G C K+ E + F
Sbjct: 397 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 456
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G + T N +I C +G I+ EM + + + + L+ GF E
Sbjct: 457 LEK--GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 514
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
K E ++ + M K GI + YN ++ LC + + ++A L D + G+ N+ TY
Sbjct: 515 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 574
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
++ G+ K +E + LF + + E +S + + CQ G AL++ +K
Sbjct: 575 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 634
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G +P+ +T SL+ G+ +I V +A LI M+K
Sbjct: 635 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 669
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 36/271 (13%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NAL+ G + E RI E + G+ + TYN +I FC G + + EM
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLE-RGLPMDRITYNALILGFCNEGKVEGCFRLREEMT 527
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
++ I+P+ + LL G K +D K+ + G+ S ++ Y I ++ CK R E
Sbjct: 528 KRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIE 587
Query: 270 E-----------------------------------AKALLDGMLSRGIKPNLDTYKHLI 294
+ A LL+ M S+GI PN TY LI
Sbjct: 588 DVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 647
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
HG G +E AK L M G P+ C+ C+ G+ +TA ++
Sbjct: 648 HGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH 707
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ T ++ G + + +AN L+ MK+
Sbjct: 708 PNKFTYTVMIDGYCKLGNMEKANNLLIKMKE 738
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 2/221 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ I + +AN + L EL ++ + N + I + Q + A+Q E
Sbjct: 572 TYGIMMEGYCKANRIEDVENLFNELLSK-KMELNSIVYNIIIKAHCQNGNVAAALQLLEN 630
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ + ++L+ G E+ K + E K G PN Y +I +C+ G
Sbjct: 631 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRK-EGFVPNVVCYTALIGGYCKLG 689
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ S EM +I PN + +++ G+ K E +L M++ GI V YN
Sbjct: 690 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYN 749
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ CK + A + D M + G+ + TY L+HG+
Sbjct: 750 VLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
Query: 74 DRMAFSIAVSKLSQANHF-NAISQLL--EELKTRPDLRQNERFHVHSIVLYG--QANMID 128
D +F+ ++ L + NAI + E+L P++ ++ ++ G Q +D
Sbjct: 219 DVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVV------TYNCIINGLCQNGRLD 272
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+A + E+M G++ ++ AL+ G I +++V I E G PN +N +
Sbjct: 273 NAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGA-GFNPNVVVFNNL 331
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C+ G+ I M K+I P + L+ GF K + E L+ + G+
Sbjct: 332 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 391
Query: 249 A-SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ N Y++ + LCK R A MLSR +P+ L+ G K+G A
Sbjct: 392 SIHPDNCYSV-VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEAT 450
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L+ + G + LC G+ A ++ + + +G T +L+ G
Sbjct: 451 ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 510
Query: 368 ASISKVAEANELIGLMKKR 386
+ KV L M KR
Sbjct: 511 CNEGKVEGCFRLREEMTKR 529
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 24/321 (7%)
Query: 63 CGASLAPES------------PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDL 107
CGA PE+ P+DR+ ++ + +L EE+ R PD+
Sbjct: 499 CGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDI 558
Query: 108 RQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
+ ++ +L G N+ +D A++ ++E GL ++ ++ G + E+V
Sbjct: 559 ------YTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ +F E +E NS YN +IK+ C++G+ ++ +L M+ K I PN + L+
Sbjct: 613 ENLFNELLS-KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 671
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G ED ++ M K G V Y I CKL + + A++ M+S I P
Sbjct: 672 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 731
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N TY +I G+ K GN+E A L M G PD + + T C+ + + A KVC
Sbjct: 732 NKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVC 791
Query: 346 RASMAKGWVPHFSTMKSLVTG 366
+G T +LV G
Sbjct: 792 DQMATEGLPVDEITYTTLVHG 812
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 17/308 (5%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG---LRQSVDALNALL 153
LL T P L+ F + S+V +AN + + F M + + + +NAL
Sbjct: 199 LLARKGTFPSLKTC-NFLLSSLV---KANEFEKCCEVFRVMSEGACPDVFSFTNVINALC 254
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G E +F + K+ GI PN TYN +I C++G + + + +M K +
Sbjct: 255 KG----GKMENAIELFMKMEKL-GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGV 309
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+PN +G L+ G K + ++ V VL M G V V+N I CK+ E A
Sbjct: 310 QPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALK 369
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG--CEPDSYCFFMFTYF 331
+ D M+S+ I P T L+ GF K +E A+ + + G PD+ C+ + ++
Sbjct: 370 IKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN-CYSV-VHW 427
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL-IGLMKKRFPKS 390
LC+ Y +A + + +++ + P + LV GL K EA EL L++K P S
Sbjct: 428 LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPAS 487
Query: 391 GDMWNAAL 398
NA +
Sbjct: 488 KVTSNALI 495
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 145/335 (43%), Gaps = 14/335 (4%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHF-NAISQLLEE-LKTRPDLRQNERF 113
+I D+ ++ P S + + K Q H NA+ ++L L PD
Sbjct: 368 LKIKDVMISKNITPTS-VTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPD------- 419
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMD-KYGLRQSVDALNALLLG-CILSKNYEEVKRIFTE 171
+ +S+V + H+ F +M R S L L+ G C K+ E + F
Sbjct: 420 NCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 479
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G + T N +I C +G I+ EM + + + + L+ GF E
Sbjct: 480 LEK--GSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEG 537
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
K E ++ + M K GI + YN ++ LC + + ++A L D + G+ N+ TY
Sbjct: 538 KVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYG 597
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
++ G+ K +E + LF + + E +S + + CQ G AL++ +K
Sbjct: 598 IMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSK 657
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G +P+ +T SL+ G+ +I V +A LI M+K
Sbjct: 658 GILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKE 692
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 110/271 (40%), Gaps = 36/271 (13%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NAL+ G + E RI E + G+ + TYN +I FC G + + EM
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLE-RGLPMDRITYNALILGFCNEGKVEGCFRLREEMT 550
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
++ I+P+ + LL G K +D K+ + G+ S ++ Y I ++ CK R E
Sbjct: 551 KRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIE 610
Query: 270 E-----------------------------------AKALLDGMLSRGIKPNLDTYKHLI 294
+ A LL+ M S+GI PN TY LI
Sbjct: 611 DVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLI 670
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
HG G +E AK L M G P+ C+ C+ G+ +TA ++
Sbjct: 671 HGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIH 730
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ T ++ G + + +AN L+ MK+
Sbjct: 731 PNKFTYTVMIDGYCKLGNMEKANNLLIKMKE 761
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 2/221 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ I + +AN + L EL ++ + N + I + Q + A+Q E
Sbjct: 595 TYGIMMEGYCKANRIEDVENLFNELLSK-KMELNSIVYNIIIKAHCQNGNVAAALQLLEN 653
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ + ++L+ G E+ K + E K G PN Y +I +C+ G
Sbjct: 654 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRK-EGFVPNVVCYTALIGGYCKLG 712
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ S EM +I PN + +++ G+ K E +L M++ GI V YN
Sbjct: 713 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYN 772
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ CK + A + D M + G+ + TY L+HG+
Sbjct: 773 VLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
Query: 74 DRMAFSIAVSKLSQANHF-NAISQLL--EELKTRPDLRQNERFHVHSIVLYG--QANMID 128
D +F+ ++ L + NAI + E+L P++ ++ ++ G Q +D
Sbjct: 242 DVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVV------TYNCIINGLCQNGRLD 295
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+A + E+M G++ ++ AL+ G I +++V + E G PN +N +
Sbjct: 296 NAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIG-SGFNPNVVVFNNL 354
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C+ G+ I M K+I P + L+ GF K + E L+ + G+
Sbjct: 355 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 414
Query: 249 A-SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ N Y++ + LCK R A MLSR +P+ L+ G K+G A
Sbjct: 415 SIHPDNCYSV-VHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEAT 473
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L+ + G + LC G+ A ++ + + +G T +L+ G
Sbjct: 474 ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 533
Query: 368 ASISKVAEANELIGLMKKR 386
+ KV L M KR
Sbjct: 534 CNEGKVEGCFRLREEMTKR 552
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 18/352 (5%)
Query: 40 EKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLE 99
++KR+ A+L ES P + L P +R ++ + + + ++ +
Sbjct: 323 KQKRSKEAKLIFESMP--------SSGLNP----NRFTYTALIDGFIKEGNIEEALRIKD 370
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
E+ TR L+ N + I +A + AM F EM G+ N L+ G + S
Sbjct: 371 EMITR-GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKS 429
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+ + + E K + P+ TY+ +I C S D +L +M R ++PN
Sbjct: 430 HDMAKACELLAEM-KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFM 488
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+G L+ + +E +YE ++L++M G+ + YN I LC+ K+ EEAK LL M
Sbjct: 489 YGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMG 548
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+GIKPN TY I+ + K G ++ A++ F M + G P++ + + C G
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTV 608
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
AL + + KG +P +++ S+SK + E +G+ K F K+G
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSAII---HSLSKNGKTKEAMGVFLK-FLKTG 656
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 7/221 (3%)
Query: 172 FPKVYG------IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
F KVYG I P+ TY VIK+ C+ GD +L+EM K +PN + +
Sbjct: 226 FWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIG 284
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G + ++ +V ++M + G+ + Y + + CK KRS+EAK + + M S G+ P
Sbjct: 285 GLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNP 344
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N TY LI GF KEGN+E A ++ M G + + + + + GE A+ +
Sbjct: 345 NRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G P T L+ G +A+A EL+ MK R
Sbjct: 405 NEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 126/296 (42%), Gaps = 12/296 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +++ + +++ +LL E+K R + +S+++ G ++ + A
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKAR---KLTPSPFTYSVLISGLCHSSDLQKAN 471
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY---GIEPNSETYNKV 188
+ ++M + G++ +V L+ + YE + E K+ G+ P+ YN +
Sbjct: 472 EVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE----MAIELLKIMIANGVLPDLFCYNCL 527
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C + +L +M K I+PNA +G + + K + + + + M GI
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+Y I I+ C + + EA + ML +G+ P++ Y +IH K G + A
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+F G PD + + C+ G+ E A ++ + G P+ +L+
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 4/220 (1%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
EVK++ E G+ P+ TY ++ FC+ S I M + PN + L
Sbjct: 297 EVKKLMME----KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF KE E+ ++ M G+ V YN I + K +A +L + ML GI
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+P+ TY LI G+ K ++ A +L A M P + + + LC + + A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
V + G P+ +L+ S+ A EL+ +M
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 127/319 (39%), Gaps = 43/319 (13%)
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PD+R +HS+ G+ AM F + K G+ V N+L+ G + E+
Sbjct: 624 PDIRAYSAI-IHSLSKNGKTK---EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEK 679
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSF--CESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+++ E GI PN YN +I + C+SG+ + + + EM K I P+ + +
Sbjct: 680 ASQLYDEMLH-NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 738
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML--- 279
L+ G KE E + ++ + S ++ +N I S CK + EA+ L D M+
Sbjct: 739 LIDGCGKEGNLEKALSLFHEAQQKSVGS-LSAFNSLIDSFCKHGKVIEARELFDDMVDKK 797
Query: 280 --------------------------------SRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+R I PN TY L+ + + GN
Sbjct: 798 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 857
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M G D+ + + C+ G+ ALK+ S+ +G +L+ L
Sbjct: 858 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 917
Query: 368 ASISKVAEANELIGLMKKR 386
+++ EL+ M K
Sbjct: 918 CKEKQISTVLELLSEMGKE 936
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F++M L ++ L+ ++ EE +++F + + I PN+ TY +
Sbjct: 785 EARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDM-ETRNIIPNTLTYTSL 843
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ S+ + G+ + S+ +M + I +A +G++ + + KE K + K+L GI
Sbjct: 844 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 903
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+V++ I LCK K+ LL M + + T L+ GF K GN + A K
Sbjct: 904 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 963
Query: 309 LFASMTNGGCEPDS 322
+ M G P S
Sbjct: 964 VLGVMQRLGWVPTS 977
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 66/178 (37%), Gaps = 40/178 (22%)
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-------------------------- 282
S + V++I I L EA ++ +S G
Sbjct: 169 GSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWK 228
Query: 283 ---------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
I P++ TY ++I K G++ K + + M C+P+ + + F LC
Sbjct: 229 VYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLC 287
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
Q G + AL+V + M KG P T LV G + EA L+ + P SG
Sbjct: 288 QTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAK----LIFESMPSSG 341
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 128/276 (46%), Gaps = 1/276 (0%)
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
++NE + + I +A I+ A++ F +M + +V L+ S E
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F E K G EPN TY +I C+ +L+EM K + P+ + L+ G+
Sbjct: 321 LFNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
KE +D ++L +ME YN I LCK ++ +A ALL+ ML R + P+L
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LIHG K +LE A +L + M G PD + + +F LC+ G E A + +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
AKG + +L+ G + K+ A L+ M
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +++++ G + N +D A + EM + GL SV NAL+ G ++ I +
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL-D 393
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ PN+ TYN++I C+ ++L +M + + P+ + L+ G K +
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
E ++L +M + G+ Y++ I +LCK R EEA L D + ++G+K N Y
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G+ K G ++ A L M N C P+SY + + LC+ + + A + +
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573
Query: 352 GWVPHFSTMKSLV 364
G P T L+
Sbjct: 574 GVKPTVVTYTILI 586
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 137/317 (43%), Gaps = 16/317 (5%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-------QANMIDH 129
+++ + L + N + ++L E+ +E+ + S+V Y + MID
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEM--------SEKGLIPSVVTYNALIDGYCKEGMIDD 387
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M+ + N L+ G + + + + + + P+ TYN +I
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE-RKLSPSLITYNSLI 446
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ D S Y +L+ M + P+ + + + KE + E+ G + ++ G+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y I CK+ + + A +LL+ ML+ PN TY LI G KE ++ A L
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M G +P + + + + G ++ ALKV ++ G+ P T + + S
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626
Query: 370 ISKVAEANELIGLMKKR 386
+ E +++I M +
Sbjct: 627 QGMLEEVDDVIAKMNEE 643
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
GL +L+LG +K + +F P+ G + N +Y +I CE+G +
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQ-KGCQRNEVSYTNLIHGLCEAGRINE 282
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ A+M + P + +L+ + + + M++ G V+ Y + I
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLID 342
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK + +EA+ +L M +G+ P++ TY LI G+ KEG ++ A ++ M + C P
Sbjct: 343 GLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGP 402
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
++ + LC+ + A+ + + + P T SL+ G ++ + A L+
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462
Query: 381 GLMKK 385
LM +
Sbjct: 463 SLMNE 467
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 5/259 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM +M + L S+ N+L+ G + E R+ + + G+ P+ TY+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE-NGLVPDQWTYS 478
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I + C+ G ++ ++ K ++ N + L+ G+ K K + +L+ M
Sbjct: 479 VFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
YN+ I+ LCK K+ +EA +L+ ML+ G+KP + TY LI K+G + A
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598
Query: 307 KKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
K+F M + G +PD +Y F+ YF G E V +G +P T L+
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYF--SQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Query: 365 TGLASISKVAEANELIGLM 383
G A + A + + M
Sbjct: 657 DGYARLGLTHRAFDFLKCM 675
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F K G++ N Y +I +C+ G YS+L M + PN+ + +
Sbjct: 491 EEAGTLFDSV-KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G KE K ++ ++ M G+ V Y I I + K + A + + M+S G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+P++ TY +H + +G LE + A M G PD + + + G A
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + G P + L+ L+ +++ E IG+
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGI 709
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 9/289 (3%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
E K +P LR ++ +L + +ID + E+ + ++ NA++ G
Sbjct: 152 EFKFKPTLR------CYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYC 205
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
N E + ++ + G+ P++ TY +I C + + Y + M +K + N
Sbjct: 206 KIGNVVEAELYASKIVQA-GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNE 264
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ L+ G + + + K+ M + V Y + I +L R EA L +
Sbjct: 265 VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M +G +PN+ TY LI G KE ++ A+K+ + M+ G P + C+ G
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A ++ + P+ T L+ GL KV +A L+ M +R
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 118/303 (38%), Gaps = 31/303 (10%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
DHA++ F M G + V A L EEV + + + GI P+ TY
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE-EGILPDLVTYTV 654
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL----------------------- 224
+I + G + + L M +P+ +L+
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714
Query: 225 ------AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
A +K +YE K+ + M + G V++Y I C+ +R EEA+ L+ M
Sbjct: 715 VNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 774
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
RG+ P+ D Y L+ K G A +L +M G P + + L G
Sbjct: 775 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN 834
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS-GDMWNAA 397
E A V ++ G+ K L+ GL V E +ELI +M+++ + D+ AA
Sbjct: 835 EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAA 894
Query: 398 LPR 400
L R
Sbjct: 895 LMR 897
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 5/275 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ FE++ YG V + + L+ G + E IF K G ++
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM-KQQGFALDA 598
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN V+ FC+SG Y IL EM+ K ++P +G ++ G K + ++ + +
Sbjct: 599 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 658
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ GI V +Y+ I K+ R +EA +L+ M+ +G+ PN+ T+ L+ K
Sbjct: 659 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 718
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A F SM C P++Y + + LC+ +Y A + +G VP+ T +
Sbjct: 719 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 778
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
+++GLA + + +A L +RF +G + +AA
Sbjct: 779 MISGLAKVGNITDAYSLF----ERFKANGGIPDAA 809
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 118/284 (41%), Gaps = 7/284 (2%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I+ YG A + A + E + + G SV + N++L + +E +F K
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK--D 383
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
EPNS TYN +I C G Y IL EM S+ PN +++ K K E+
Sbjct: 384 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 443
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+ + + G Y I L K + +EA L + ML G N Y LI F
Sbjct: 444 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 503
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC--QGGEYETALKVCRASMAKGWVP 355
G E K+F + GC+PD + TY C + GE E + + G++P
Sbjct: 504 FIHGRKEDGHKIFKELIRRGCKPD--LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 561
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ L+ GL + E + + MK++ F +NA +
Sbjct: 562 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 605
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 133/317 (41%), Gaps = 3/317 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + L++A S + +K + + R + + + ++ + A +
Sbjct: 562 DVRSYSILIHGLTKAGQARETSNIFHAMKQQ-GFALDARAYNAVVDGFCKSGKVHKAYEI 620
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM + ++ +V A++ G +E +F E K GIE N Y+ +I F
Sbjct: 621 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVVLYSSLIDGFG 679
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y IL EM +K + PN + LL K + + Q M++
Sbjct: 680 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 739
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I I LC++++ +A M +G+ PN+ TY +I G K GN+ A LF
Sbjct: 740 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 799
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD+ F + A +V + +G + + SL+ L S+
Sbjct: 800 KANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNK-SEC 858
Query: 374 AEANELIGLMKKRFPKS 390
E ++G + + KS
Sbjct: 859 LEQAAIVGAVLREIAKS 875
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 91/182 (50%)
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+A MRR RP + + +L+ + + E ++L+ M++ G GV+++ +++L +
Sbjct: 167 VAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAR 226
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ +A AL+D + ++P++ Y I FGK GN++ A K F + G +PD
Sbjct: 227 EGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVS 286
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + LC+ G A ++ A+ VP +++ G S + +A +L+ ++
Sbjct: 287 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 346
Query: 385 KR 386
+R
Sbjct: 347 ER 348
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 108/277 (38%), Gaps = 2/277 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A + FE + G +L+ G +E R+F + G N
Sbjct: 435 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA-GHNANP 493
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I++F G + I E+ R+ +P+ T + +K + E + +
Sbjct: 494 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 553
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ G V Y+I I L K ++ E + M +G + Y ++ GF K G
Sbjct: 554 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 613
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A ++ M +P + L + + A + + +KG + S
Sbjct: 614 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 673
Query: 363 LVTGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
L+ G + ++ EA ++ +MKK + WN+ L
Sbjct: 674 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 710
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 102/262 (38%), Gaps = 2/262 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A+ M + R + A L+ ++ E + + +V G E
Sbjct: 156 RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEV-GYEVGV 214
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+ ++++ G + +++ E++ + P+ + + + F K + K
Sbjct: 215 HLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHE 274
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
++ G+ Y I LCK R EA+ L M + P Y +I G+G G
Sbjct: 275 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 334
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
E A KL + GC P F L + + + AL + M K P+ ST
Sbjct: 335 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV-MKKDAEPNSSTYNI 393
Query: 363 LVTGLASISKVAEANELIGLMK 384
++ L +V EA ++ M+
Sbjct: 394 IIDMLCLGGRVEEAYRILDEME 415
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 4/285 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ +S L + + ++L ++ R D N + I + N ++ A +
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIER-DCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ G+ V N+L+ G LS+N+ ++ E K G P+ TYN +I S C
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM-KTKGCHPDEFTYNMLIDSLC 452
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G ++L EM N + L+ GF K + + ++ ME G++
Sbjct: 453 FRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSV 512
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I LCK +R EEA L+D M+ G++P+ TY L+ F K G+++ A + +M
Sbjct: 513 TYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTM 572
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG--WVPH 356
+ GCEPD + LC+ G E A K+ R KG PH
Sbjct: 573 ASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPH 617
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 138/313 (44%), Gaps = 5/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D F+I + L +A+ L+EE++ L + F + ++ G + +D AM
Sbjct: 194 DVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTF---TTIMQGFIEEGNLDGAM 250
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ E+M + G + +N L+ G EE R E G P+ T+N ++
Sbjct: 251 RVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNG 310
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
++G ++ M R+ P+ + L++G K + ++ KVL M + +
Sbjct: 311 LSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPN 370
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
YN I +LCK + EEA L + +GI P++ TY LI G N A +L+
Sbjct: 371 TVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYK 430
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M GC PD + + M LC G+ + AL + + G + T +L+ G
Sbjct: 431 EMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNK 490
Query: 372 KVAEANELIGLMK 384
++AEA E+ M+
Sbjct: 491 RIAEAEEIFDQME 503
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 137/311 (44%), Gaps = 10/311 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQ--NERFHVHSIVLYGQANM--IDH 129
D+ F++ V+ LS+ H ++++ + LR+ + + ++ ++ G + +D
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMM-----LREGFDPDIYTYNSLISGLCKLGEVDE 354
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ +M + + N ++ EE ++ GI P+ TYN +I
Sbjct: 355 AVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTG-KGILPDVCTYNSLI 413
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C S + + + EM+ K P+ + +L+ K ++ +L+ ME G A
Sbjct: 414 QGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCA 473
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I CK KR EA+ + D M +G+ N TY LI G K +E A +L
Sbjct: 474 RNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQL 533
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G PD + + + C+ G+ + A + + + G P T +L+ GL
Sbjct: 534 MDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCK 593
Query: 370 ISKVAEANELI 380
+V A +L+
Sbjct: 594 AGRVEAATKLL 604
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 165/373 (44%), Gaps = 9/373 (2%)
Query: 9 TNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLA 68
+ + T N+ L T++ + A L+ + L+ E + ++ + AS
Sbjct: 28 STLSFATTNHEPLTTTT-----NSATRLSPNFTPTQLLHSLRREEDSSAVIHLFYWASKQ 82
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P F + KL +A F+A+ +L+E+K + N+ V I Y + +
Sbjct: 83 PNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVF-IESYASFGLYN 141
Query: 129 HAMQTFEEMD-KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+Q + M+ ++G+ + N LL ++ N ++ I GI P+ T+N
Sbjct: 142 EILQFVDAMEVEFGVVANTHFYN-FLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNI 200
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+IK+ C + ++ EM + P+ F ++ GF +E + +V + M + G
Sbjct: 201 LIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
N+ + CK R EEA ++ M L G P+ T+ L++G K G+++ A
Sbjct: 261 CVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHA 320
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M G +PD Y + LC+ GE + A+KV + + P+ T ++++
Sbjct: 321 LEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIIST 380
Query: 367 LASISKVAEANEL 379
L ++V EA +L
Sbjct: 381 LCKENQVEEATKL 393
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 10/302 (3%)
Query: 89 NHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQS 145
NH A+ +L +E+KT+ PD + S+ G+ + A+ +EM+ G ++
Sbjct: 421 NHTVAM-ELYKEMKTKGCHPD-EFTYNMLIDSLCFRGK---LQEALNLLKEMEVSGCARN 475
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V N L+ G +K E + IF + ++ G+ NS TYN +I C+S ++
Sbjct: 476 VITYNTLIDGFCKNKRIAEAEEIFDQM-ELQGVSRNSVTYNTLIDGLCKSERVEEASQLM 534
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
+M + +RP+ + LL F K + ++Q M G + Y I LCK
Sbjct: 535 DQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKA 594
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
R E A LL + +GI Y +I + + A +LF M PD+ +
Sbjct: 595 GRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTY 654
Query: 326 FMFTYFLCQGG-EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ LCQGG A+ + +G+VP FS+ L GL S++ V +LI ++
Sbjct: 655 KIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVM 714
Query: 385 KR 386
++
Sbjct: 715 EK 716
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 128/276 (46%), Gaps = 1/276 (0%)
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
++NE + + I +A I+ A++ F +M + +V L+ S E
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F E K G EPN TY +I C+ +L+EM K + P+ + L+ G+
Sbjct: 321 LFNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
KE +D ++L +ME YN I LCK ++ +A ALL+ ML R + P+L
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LIHG K +LE A +L + M G PD + + +F LC+ G E A + +
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
AKG + +L+ G + K+ A L+ M
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +++++ G + N +D A + EM + GL SV NAL+ G ++ I +
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEIL-D 393
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ PN+ TYN++I C+ ++L +M + + P+ + L+ G K +
Sbjct: 394 LMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN 453
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
E ++L +M + G+ Y++ I +LCK R EEA L D + ++G+K N Y
Sbjct: 454 DLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYT 513
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G+ K G ++ A L M N C P+SY + + LC+ + + A + +
Sbjct: 514 ALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573
Query: 352 GWVPHFSTMKSLV 364
G P T L+
Sbjct: 574 GVKPTVVTYTILI 586
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 137/317 (43%), Gaps = 16/317 (5%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-------QANMIDH 129
+++ + L + N + ++L E+ +E+ + S+V Y + MID
Sbjct: 336 TYTVLIDGLCKENKMDEARKMLSEM--------SEKGLIPSVVTYNALIDGYCKEGMIDD 387
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M+ + N L+ G + + + + + + P+ TYN +I
Sbjct: 388 AFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE-RKLSPSLITYNSLI 446
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ D S Y +L+ M + P+ + + + KE + E+ G + ++ G+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y I CK+ + + A +LL+ ML+ PN TY LI G KE ++ A L
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M G +P + + + + G ++ ALKV ++ G+ P T + + S
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626
Query: 370 ISKVAEANELIGLMKKR 386
+ E +++I M +
Sbjct: 627 QGMLEEVDDVIAKMNEE 643
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
GL +L+LG +K + +F P+ G + N +Y +I CE+G +
Sbjct: 224 GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQ-KGCQRNEVSYTNLIHGLCEAGRINE 282
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ A+M + P + +L+ + + + M++ G V+ Y + I
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLID 342
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK + +EA+ +L M +G+ P++ TY LI G+ KEG ++ A ++ M + C P
Sbjct: 343 GLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGP 402
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
++ + LC+ + A+ + + + P T SL+ G ++ + A L+
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462
Query: 381 GLMKK 385
LM +
Sbjct: 463 SLMNE 467
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 5/259 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM +M + L S+ N+L+ G + E R+ + + G+ P+ TY+
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNE-NGLVPDQWTYS 478
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I + C+ G ++ ++ K ++ N + L+ G+ K K + +L+ M
Sbjct: 479 VFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND 538
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
YN+ I+ LCK K+ +EA +L+ ML+ G+KP + TY LI K+G + A
Sbjct: 539 ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHA 598
Query: 307 KKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
K+F M + G +PD +Y F+ YF G E V +G +P T L+
Sbjct: 599 LKVFNHMVSLGYQPDVCTYTAFLHAYF--SQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656
Query: 365 TGLASISKVAEANELIGLM 383
G A + A + + M
Sbjct: 657 DGYARLGLTHRAFDFLKCM 675
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F K G++ N Y +I +C+ G YS+L M + PN+ + +
Sbjct: 491 EEAGTLFDSV-KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G KE K ++ ++ M G+ V Y I I + K + A + + M+S G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+P++ TY +H + +G LE + A M G PD + + + G A
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + G P + L+ L+ +++ E IG+
Sbjct: 670 DFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGI 709
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 9/289 (3%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
E K +P LR ++ +L + +ID + E+ + ++ NA++ G
Sbjct: 152 EFKFKPTLR------CYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYC 205
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
N E + ++ + G+ P++ TY +I C + + Y + M +K + N
Sbjct: 206 KIGNVVEAELYASKIVQA-GLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNE 264
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ L+ G + + + K+ M + V Y + I +L R EA L +
Sbjct: 265 VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M +G +PN+ TY LI G KE ++ A+K+ + M+ G P + C+ G
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A ++ + P+ T L+ GL KV +A L+ M +R
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 110/277 (39%), Gaps = 19/277 (6%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
DHA++ F M G + V A L EEV + + + GI P+ TY
Sbjct: 596 DHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE-EGILPDLVTYTV 654
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK--------------- 232
+I + G + + L M +P+ +L+ E++
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714
Query: 233 ---YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
YE K+ + M + G V++Y I C+ +R EEA+ L+ M RG+ P+ D
Sbjct: 715 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 774
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y L+ K G A +L +M G P + + L G E A V +
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 834
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G+ K L+ GL V E +ELI +M+++
Sbjct: 835 SCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 871
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ FE+M ++G V AL+ G + EE + + K G+ P+ + YN ++
Sbjct: 721 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM-KERGMSPSEDIYNSLL 779
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G + ++ M + P + LL+ G Y E E V + CG
Sbjct: 780 DCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYN 839
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ + I L K +E L+D M +G +PN TY LI G
Sbjct: 840 YDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 3/265 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+ ++I+ G +A ++ A TFEEM K GL+ +A +AL+ G + + +EV RI +
Sbjct: 299 YTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI-KD 357
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
GI N TYN +I C+ G IL M +PN+ F LL+ G+ +EH
Sbjct: 358 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREH 417
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++L MEK + Y I LC K A LL+ M G+KPN+ Y
Sbjct: 418 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 477
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI + EG +E A++L M+ G PD +C+ L + G+ E A +
Sbjct: 478 ILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 537
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G P T + + G + K+ EA
Sbjct: 538 GLKPDAVTFGAFILGYSKTGKMTEA 562
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 13/326 (3%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERF 113
R+LD + +AP D ++ +S LS+A S L E++ R PD F
Sbjct: 494 RLLDGMSCSGVAP----DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 549
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
I+ Y + + A + F+EM +GL + L+ G + N E IF
Sbjct: 550 ----ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLH 605
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G+ P+ +T + I ++G + +E++ K + P+ + L++GF K+ +
Sbjct: 606 AL-GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 664
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E ++ M GIA + +YN + LCK + A+ L DGM +G++P+ TY +
Sbjct: 665 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 724
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G+ K N+ A LF M + G +P S+ + + C+ G+ E A+ + R + KG+
Sbjct: 725 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 784
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
S +L+ G K+ EA++L
Sbjct: 785 ATTLS-FNTLIDGYCKSCKIQEASQL 809
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN+ TY + C + + EM++ ++P+ L+ GF +E ++V
Sbjct: 293 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 352
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ +M CGI + YN+ I LCK + E+A +L GM++ G KPN T+ LI G
Sbjct: 353 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEG 412
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +E N+ A +L M P + + LC + A K+ G P+
Sbjct: 413 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 472
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
L+ AS ++ EA L+ M
Sbjct: 473 VVVYSILIMAYASEGRIEEARRLLDGM 499
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + E+M GL+ +V + L++ EE +R+ G+ P+ YN +I
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM-SCSGVAPDIFCYNAII 515
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
++G + L E++ + ++P+A FG + G+ K K + K M G+
Sbjct: 516 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 575
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+Y + I K EA ++ + + G+ P++ T IHG K G ++ A K+
Sbjct: 576 PNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 635
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F+ + G PD + + C+ GE E A ++ KG P+ +LV GL
Sbjct: 636 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 695
Query: 370 ISKVAEANELIGLMKKR 386
+ A +L M ++
Sbjct: 696 SGDIQRARKLFDGMPEK 712
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
KR+ E + G+ PN Y+ VI+ C+ GD + M K + PN + ++ A
Sbjct: 248 KRVLIEMDE-KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITA 306
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G + + + + M+K G+ N + I + +E + D M+S GI
Sbjct: 307 GLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPI 366
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
NL TY LIHG K G +E A ++ M GC+P+S F + C+ AL++
Sbjct: 367 NLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ VP + +++ GL ++ AN+L+
Sbjct: 427 DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 461
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 2/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + F+ M + GL + ++ G S+N E +F E P G++P+S YN
Sbjct: 699 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS-KGVQPHSFVYN 757
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+ GD ++ EM +K + F L+ G+ K K ++ ++ Q M
Sbjct: 758 ALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAK 816
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I Y I CK + EEA L M R + + TY L++G+ K G
Sbjct: 817 QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEV 876
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M G +PD + + Y C+ A K+ + KG + + L+T
Sbjct: 877 FALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITA 936
Query: 367 LASISKVAEANELIGLM 383
L + EA++L+ M
Sbjct: 937 LCKREDLTEASKLLDEM 953
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 97/203 (47%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY ++ + C++GD +L EM K + PN + L++ G + ++ ++ + M
Sbjct: 230 TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM 289
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G+ Y I LC+ KR EAK + M G+KP+ + LI GF +EG++
Sbjct: 290 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 349
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ ++ M + G + + + + LC+ G+ E A ++ + + G P+ T L
Sbjct: 350 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLL 409
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ G + A EL+ M+KR
Sbjct: 410 IEGYCREHNMGRALELLDEMEKR 432
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 121 YGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
Y ++ I A Q F+EM K + V + C K EE +F E + +
Sbjct: 797 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK-MEEANLLFKEMQE-RNLI 854
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
++ TY ++ + + G SS V+++ +M K ++P+ +GL++ KE + K+
Sbjct: 855 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 914
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ G+ + ++++ I +LCK + EA LLD M G+KP+L L+ F +
Sbjct: 915 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHE 974
Query: 300 EGNLEGAKKLFASMTNGGCEPDS 322
G ++ A ++F + + G PD+
Sbjct: 975 AGKMDEATRVFEGVKSLGLVPDT 997
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 103/241 (42%), Gaps = 6/241 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++F+ + ++ SQL +E+ + + + + I + +A ++ A F+
Sbjct: 788 LSFNTLIDGYCKSCKIQEASQLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFK 846
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFC 193
EM + L +L+ G + +F F K+ G++P+ TY VI + C
Sbjct: 847 EMQERNLIVDTVTYTSLMYG---YNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + + + E+ K + T LL+ K + K+L M + G+ +
Sbjct: 904 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLA 963
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
N ++S + + +EA + +G+ S G+ P+ T L++G + + E A+ L +
Sbjct: 964 ACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023
Query: 314 T 314
Sbjct: 1024 V 1024
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N ++ L K E + +GML + ++ TY +L+ K G+L GAK++ M
Sbjct: 197 NSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDE 256
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P+ + + + +CQ G+ + A+++ R+ KG VP+ T + GL ++ E
Sbjct: 257 KGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNE 316
Query: 376 A 376
A
Sbjct: 317 A 317
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 74/193 (38%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
++ +I S+ G ++ + SI + LL K E KV M
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGM 219
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ V Y + +LCK AK +L M +G+ PN Y +I G + G++
Sbjct: 220 LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDI 279
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A +L SM G P++Y + + T LC+ A G P ++ +L
Sbjct: 280 DEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSAL 339
Query: 364 VTGLASISKVAEA 376
+ G + E
Sbjct: 340 IDGFMREGDIDEV 352
>gi|242074342|ref|XP_002447107.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
gi|241938290|gb|EES11435.1| hypothetical protein SORBIDRAFT_06g028710 [Sorghum bicolor]
Length = 363
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 7/293 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH---AMQTF 134
+S+ + KL+ A F+ + +LL + KT LR ++ F I +YG N+ +H A+ T
Sbjct: 74 YSLMIDKLAFARRFSDVEELLSKAKTE-KLRFSDEFFYRLIKMYG--NVAEHPQKAIDTL 130
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
M Y S N +L + + YE V I++ P++ G+ ++ ++N ++K C+
Sbjct: 131 FAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEIYSSAPRL-GVTLDTCSFNILVKGLCQ 189
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
S+L EM ++ +PN + + + + ++ + M K IA+ V
Sbjct: 190 CSKFDEAISLLHEMPKQGCQPNVATYSTFMHFLCQRSLVDKAFELFERMRKQDIAADTVV 249
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YNI I LC+ +R EA L M S G PN TY+ L+ G G AK L ++M+
Sbjct: 250 YNILISGLCREERVSEAFDLFKSMTSEGCYPNSGTYQVLLDGLISLGKFFEAKSLVSTMS 309
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G P + + LC + A V + + +G+VP T L+T +
Sbjct: 310 TEGVRPSFQSYKLLIDGLCSEDCVDDAHLVLKQMVGQGFVPRMGTWTKLLTSI 362
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 87/203 (42%), Gaps = 2/203 (0%)
Query: 186 NKVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N+V+K F D S + S+ + R +P+ + L++ ++ DV ++L +
Sbjct: 39 NEVLKIFANIRDPSLINSVFKKACSRIDYKPSEALYSLMIDKLAFARRFSDVEELLSKAK 98
Query: 245 KCGIASGVNVYNIRIQSLCKL-KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ + I+ + + ++A L M P+ T+ +++H +
Sbjct: 99 TEKLRFSDEFFYRLIKMYGNVAEHPQKAIDTLFAMPGYNCWPSTKTFNYVLHMLVCKRQY 158
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E ++++S G D+ F + LCQ +++ A+ + +G P+ +T +
Sbjct: 159 EVVHEIYSSAPRLGVTLDTCSFNILVKGLCQCSKFDEAISLLHEMPKQGCQPNVATYSTF 218
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ L S V +A EL M+K+
Sbjct: 219 MHFLCQRSLVDKAFELFERMRKQ 241
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A +EM GL +V + L+ G + N +E +I E G++PN TY+
Sbjct: 330 DQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAA-GVQPNKITYDN 388
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+ C+ G IL +M + + + L++ G ++H E+ +L M K G
Sbjct: 389 LIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGG 448
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ V Y+I I LC++ SE A LL+ M++ G+KPN Y LI G+ +EG+ A
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLAC 508
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ MT PD YC+ L G+ + A++ + KG+ P+ T L+ G
Sbjct: 509 ETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGY 568
Query: 368 ASISKVAEANELIGLM 383
+ + +A +L+ M
Sbjct: 569 SMAGNLEKAEQLLHQM 584
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 122/266 (45%), Gaps = 2/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ++ A Q +M GL + +L G S N E+V + G+ P
Sbjct: 568 YSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLE-KGLMP 626
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ Y VI + SG + S+L+ + + + P++ +G L++GF K E +L
Sbjct: 627 DNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLL 686
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M K GI G++ YN I CK A+ + + ++ +G+ PN TY LI G+ K
Sbjct: 687 DEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKA 746
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++ A L+ M G PD++ + + G+ + AL + +A+G+ S+
Sbjct: 747 GDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSF 805
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+LV G K+ E + + +M +
Sbjct: 806 NTLVHGFCKRGKLQETVKFLHVMMDK 831
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++M K G N ++ G + N EE + E K GI PN TY+ +I
Sbjct: 402 ASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRK-GGISPNVYTYSIII 460
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G+S +L +M ++PNA + L++G+ +E + + L+ M + +
Sbjct: 461 NGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT 520
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I L + + +EA D ML +G +PN TY LIHG+ GNLE A++L
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M N G P+ + + + E ++ + KG +P ++ L+S
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSS 640
Query: 370 ISKVAEANELIGLMKK 385
+ A ++ +++K
Sbjct: 641 SGHMQAAVSVLSVIEK 656
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 107/246 (43%), Gaps = 1/246 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ++ A + EEM + G +V N L+ G + EE E YG+ P
Sbjct: 253 YCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMED-YGLVP 311
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I C+ G +L EM + PN + L+ GF ++ ++ K++
Sbjct: 312 DGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIV 371
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M G+ Y+ I+ LCKL R A +L M G + TY +I G ++
Sbjct: 372 KEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQ 431
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
N E A L M GG P+ Y + + LCQ GE E A + +A G P+
Sbjct: 432 HNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVY 491
Query: 361 KSLVTG 366
L++G
Sbjct: 492 APLISG 497
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 128/302 (42%), Gaps = 2/302 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+SI ++ L Q S LLE++ L+ N + I Y + A +T ++M
Sbjct: 456 YSIIINGLCQIGESERASGLLEQM-IADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ L + N+L++G +E + E + G +PN TY +I + +G+
Sbjct: 515 TRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLE-KGFQPNDFTYGGLIHGYSMAGN 573
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+L +M + PN + +L G++K E V L+ M + G+ +Y I
Sbjct: 574 LEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGI 633
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I +L + A ++L + G+ P+ Y LI GF K ++E A L M G
Sbjct: 634 VIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
EP C+ C+ + A + + + KG P+ T +L+ G + +A
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753
Query: 378 EL 379
+L
Sbjct: 754 DL 755
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 21/337 (6%)
Query: 67 LAPESP----LDRMAFSIAVSKL-SQANHFNAISQLLEELKTRPDL-----------RQN 110
LAP +P +A S+ + L QAN + Q++ T P + Q
Sbjct: 113 LAPSAPAPDAFAHLAVSLCAAGLYPQANGL--LDQMIRAYPTPPLVLSSVHRALSGSDQG 170
Query: 111 ERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
R V +++ Y + + + M GL S+ N LL + + + + ++
Sbjct: 171 RRPVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKV 230
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
F + GI P+ TY+ +I+++C+ D S ++ EMR N + L+ G
Sbjct: 231 -RGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLC 289
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
+ E+ + ME G+ Y I LCK R ++AK LLD M G+ PN+
Sbjct: 290 RAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVV 349
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
Y LI GF ++GN + A K+ M+ G +P+ + LC+ G A ++ +
Sbjct: 350 VYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G++ T ++ G EA L+ M+K
Sbjct: 410 TKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRK 446
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 5/264 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + I + LS + H A +L ++ + L + + I + +A ++ A+
Sbjct: 627 DNRLYGIVIHNLSSSGHMQAAVSVLSVIE-KNGLVPDSLIYGSLISGFCKAADMEKAVGL 685
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM K G+ + NAL+ G S + + IF G+ PN TY +I +C
Sbjct: 686 LDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSI-ICKGLPPNCVTYTTLIDGYC 744
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++GD + EM + + P+A + +L AG + + + M G A ++
Sbjct: 745 KAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-IS 803
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N + CK + +E L M+ + I P+L T ++++ G G+ G L A +F +
Sbjct: 804 SFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVEL 863
Query: 314 T--NGGCEPDSYCFFMFTYFLCQG 335
N + +FT + QG
Sbjct: 864 QQKNASHRDTDHLSSLFTDMINQG 887
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 167/340 (49%), Gaps = 4/340 (1%)
Query: 44 ATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT 103
+T++ +K E +P R LDI AS + +S+ + L + F A+ +L ++K
Sbjct: 59 STVSLMKRERDPQRALDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKY 118
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG-LRQSVDALNALLLGCILSKNY 162
R E ++ + + + ++ D M+ F + ++ S++A++ L I S
Sbjct: 119 ET-CRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEV 177
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR-PNATDFG 221
+ +++ ++PN+ +N ++K C++GD S + ++ EM+R I PN+ +
Sbjct: 178 DLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYS 237
Query: 222 LLLAGFYKEHKYEDVGKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ + + + ++ ++ + M+ K GI+ ++N+ I C+ E AK +LD M
Sbjct: 238 TLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKK 297
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G PN+ Y L++GF KEG ++ AK++F + G + D+ + LC+ GE +
Sbjct: 298 NGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDE 357
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
A+K+ A T ++ GL+S + EA +++
Sbjct: 358 AMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQML 397
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY-EEVKRIFTEFPKVYGIEPNSETY 185
ID A + EEM + G+ + L+ C+ +++ +E +F + GI P+ +
Sbjct: 213 IDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIF 272
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I FC SG+ IL M++ PN ++ L+ GF KE K ++ +V ++K
Sbjct: 273 NVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKK 332
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y + LC+ +EA LL M + + + TY ++ G EG E
Sbjct: 333 TGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEE 392
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A ++ G + + + LC GE E A+K +G PH +T LV
Sbjct: 393 ALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVV 452
Query: 366 GLA 368
L
Sbjct: 453 RLC 455
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 62/154 (40%), Gaps = 1/154 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID AM+ EM R N +L G EE ++ ++ G+ N +Y
Sbjct: 355 IDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQW-GCEGVHLNKGSYR 413
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + C +G+ L+ M ++ I P+ + L+ + E +VL
Sbjct: 414 IILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGI 473
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
G+ + ++S+CK ++ LLD + S
Sbjct: 474 GLIPAPKSWGAVVESICKERKLVHVFELLDSLAS 507
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 7/257 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EM G++ N ++ G + +N VK + +E K + P + T
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKK-SNLVPTAYTCG 450
Query: 187 KVIKSFCESG---DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+I C G D+S V+ I+ + ++PNA + L+ G +E ++++ ++L++M
Sbjct: 451 MIINGLCRHGSIEDASRVFEIMVSL---GVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM 507
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+K G+ V YN I LCK ++ EEAK L M+ RG+KPN+ TY LIHG+ K G +
Sbjct: 508 DKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEM 567
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A + F M G P+ C+ G A + R + + P T +L
Sbjct: 568 QVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSAL 627
Query: 364 VTGLASISKVAEANELI 380
+ GL K+ A EL+
Sbjct: 628 IHGLLRNGKLQGAMELL 644
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A + FE M G++ + L+ G + ++E RI K G++P+ YN
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDK-KGVQPDVLCYN 520
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+S L EM + ++PN +G L+ G+ K + + + + M C
Sbjct: 521 SVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGC 580
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA V I CK + EA ++ ML R + P++ TY LIHG + G L+GA
Sbjct: 581 GIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGA 640
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L + G PD + + C+ G A ++ KG P+ T +L+ G
Sbjct: 641 MELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALING 700
Query: 367 LASISKVAEANEL 379
L ++ A EL
Sbjct: 701 LCKAGEIERAREL 713
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 141/359 (39%), Gaps = 70/359 (19%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
E+ ++ N + I + Q A++ + MDK G++ V N++++G S
Sbjct: 470 EIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKS 529
Query: 160 KNYEEVKRIFTEF------PKVY----------------------------GIEPNSETY 185
+ EE K E P VY GI PN
Sbjct: 530 RKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVC 589
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED---------- 235
+I +C+ G ++ SI M +S+ P+ + L+ G + K +
Sbjct: 590 TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE 649
Query: 236 ----------------------VGKVLQMME---KCGIASGVNVYNIRIQSLCKLKRSEE 270
+GK Q+ E + GI+ + YN I LCK E
Sbjct: 650 KGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIER 709
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A+ L DG+ +G+ N TY +I G+ K GNL A +LF MT G PDS+ +
Sbjct: 710 ARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALID 769
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+ G E AL + S+ KG+ S++ +L+ G KV EAN+L+ M + K
Sbjct: 770 GCRKEGNTEKALSLFLESVQKGFAST-SSLNALMDGFCKSGKVIEANQLLEDMVDKHVK 827
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 122/273 (44%), Gaps = 1/273 (0%)
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+ H I + +A + EM++ G S+ N ++ G + +E +
Sbjct: 239 YTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD 298
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+ + TY+ +I F + + +L EM K ++P + L+ GF ++
Sbjct: 299 K-KGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDS 357
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ +V + M G+ + YN ++ +CK E+A ALL+ M+ GIKP+ TY ++
Sbjct: 358 GEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNM 417
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G+ KE N K L + M P +Y M LC+ G E A +V ++ G
Sbjct: 418 IEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGV 477
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ +L+ G + EA ++ +M K+
Sbjct: 478 KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK 510
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 118/265 (44%), Gaps = 1/265 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + D A+ F + G + N LL + + E R + + +
Sbjct: 176 YKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEA-NVLH 234
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I + +G++ +L EM K P+ + +++ G + + ++ ++
Sbjct: 235 DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELK 294
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++M+K G+ + V Y+I I K KR EAK +L+ M S+G+KP Y LI GF ++
Sbjct: 295 KLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQ 354
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G+ A ++ M G + + + + +C+ G+ E A + + G P T
Sbjct: 355 GDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTY 414
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
+++ G + +L+ MKK
Sbjct: 415 NNMIEGYLKEQNTSRVKDLLSEMKK 439
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 123/327 (37%), Gaps = 48/327 (14%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL 120
G S+ P D +S + L + +LL E + PD+ F +SI+
Sbjct: 614 GRSVHP----DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV-----FTYNSIIS 664
Query: 121 -YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
+ + I A Q E M + G+ ++ NAL+ G + E + +F P G+
Sbjct: 665 GFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPG-KGLA 723
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA---------------------- 217
N+ TY +I +C+SG+ S + + EM K + P++
Sbjct: 724 HNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSL 783
Query: 218 ------------TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
+ L+ GF K K + ++L+ M + Y I I CK
Sbjct: 784 FLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKT 843
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+EA+ M R + PN TY L+ G+ G LF M EPD +
Sbjct: 844 GFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTW 903
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKG 352
+ + G++ LK+ + KG
Sbjct: 904 SVMIDAHLKEGDHVKTLKLVDDMLKKG 930
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 1/160 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E ++ F + K + PN+ TY ++ + +G S ++++ EM K I P+ + +
Sbjct: 847 KEAEQFFVDMQK-RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSV 905
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
++ KE + K++ M K G NV ++ I LC+ + E +L+ + +G
Sbjct: 906 MIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQG 965
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ +L T L+ F K G ++GA ++ SM PDS
Sbjct: 966 LNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDS 1005
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 114/313 (36%), Gaps = 36/313 (11%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + A F M + V +AL+ G + + + + +EF + G+ P
Sbjct: 596 YCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE-KGLVP 654
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I FC+ G + + M +K I PN + L+ G K + E ++
Sbjct: 655 DVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELF 714
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG---- 296
+ G+A Y I CK +A L D M +G+ P+ Y LI G
Sbjct: 715 DGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKE 774
Query: 297 ------------------------------FGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
F K G + A +L M + +PD +
Sbjct: 775 GNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYT 834
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG-LMKK 385
+ + C+ G + A + + +P+ T +L++G + +E L ++ K
Sbjct: 835 ILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAK 894
Query: 386 RFPKSGDMWNAAL 398
G W+ +
Sbjct: 895 DIEPDGVTWSVMI 907
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F LL+ G+ K+ +++ ++ G G+ N + L K + E +GML
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ ++ TY HLI+ + GN + K+L M GC P + + LC+ GE +
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
A ++ + KG V T L+ G + EA ++ M + K G + AL
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL 347
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 5/275 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ FE++ YG V + + L+ G + E IF K G ++
Sbjct: 406 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM-KQQGFALDA 464
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN V+ FC+SG Y IL EM+ K ++P +G ++ G K + ++ + +
Sbjct: 465 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 524
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ GI V +Y+ I K+ R +EA +L+ M+ +G+ PN+ T+ L+ K
Sbjct: 525 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 584
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A F SM C P++Y + + LC+ +Y A + +G VP+ T +
Sbjct: 585 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 644
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
+++GLA + + +A L +RF +G + +AA
Sbjct: 645 MISGLAKVGNITDAYSLF----ERFKANGGIPDAA 675
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 135/328 (41%), Gaps = 8/328 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L +A +L +++ + ++ I+ YG A + A +
Sbjct: 149 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM-IMGYGSAGRFEDAYKL 207
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E + + G SV + N++L + +E +F K EPNS TYN +I C
Sbjct: 208 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK--DAEPNSSTYNIIIDMLC 265
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G Y IL EM S+ PN +++ K K E+ K+ + + G
Sbjct: 266 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 325
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I L K + +EA L + ML G N Y LI F G E K+F +
Sbjct: 326 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKEL 385
Query: 314 TNGGCEPDSYCFFMFTYFLC--QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
GC+PD + TY C + GE E + + G++P + L+ GL
Sbjct: 386 IRRGCKPD--LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 443
Query: 372 KVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ E + + MK++ F +NA +
Sbjct: 444 QARETSNIFHAMKQQGFALDARAYNAVV 471
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 2/252 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + L++A S + +K + + R + + + ++ + A +
Sbjct: 428 DVRSYSILIHGLTKAGQARETSNIFHAMKQQ-GFALDARAYNAVVDGFCKSGKVHKAYEI 486
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM + ++ +V A++ G +E +F E K GIE N Y+ +I F
Sbjct: 487 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVVLYSSLIDGFG 545
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y IL EM +K + PN + LL K + + Q M++
Sbjct: 546 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 605
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I I LC++++ +A M +G+ PN+ TY +I G K GN+ A LF
Sbjct: 606 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 665
Query: 314 TNGGCEPDSYCF 325
G PD+ F
Sbjct: 666 KANGGIPDAASF 677
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
F+ V L++ L++E+K PD+ + I +G+A +D A + F
Sbjct: 83 FTTLVRALAREGQVADALALVDEVKGSCLEPDIV----LYNVCIDCFGKAGNVDMACKFF 138
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E+ GL+ + +++ + E + +F + + P + YN +I +
Sbjct: 139 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV-PCAYAYNTMIMGYGS 197
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+G Y +L +R + P+ F +L K+ K ++ + ++M+K +
Sbjct: 198 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEPNSST 256
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YNI I LC R EEA +LD M + PNL T ++ K LE A K+F S +
Sbjct: 257 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 316
Query: 315 NGGCEPD--SYC 324
GC PD +YC
Sbjct: 317 QRGCNPDCVTYC 328
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 91/182 (50%)
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+A MRR RP + + +L+ + + E ++L+ M++ G GV+++ +++L +
Sbjct: 33 VAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAR 92
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ +A AL+D + ++P++ Y I FGK GN++ A K F + G +PD
Sbjct: 93 EGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVS 152
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + LC+ G A ++ A+ VP +++ G S + +A +L+ ++
Sbjct: 153 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR 212
Query: 385 KR 386
+R
Sbjct: 213 ER 214
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 108/277 (38%), Gaps = 2/277 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A + FE + G +L+ G +E R+F + G N
Sbjct: 301 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA-GHNANP 359
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I++F G + + E+ R+ +P+ T + +K + E + +
Sbjct: 360 VVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 419
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ G V Y+I I L K ++ E + M +G + Y ++ GF K G
Sbjct: 420 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 479
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A ++ M +P + L + + A + + +KG + S
Sbjct: 480 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 539
Query: 363 LVTGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
L+ G + ++ EA ++ +MKK + WN+ L
Sbjct: 540 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 576
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 102/262 (38%), Gaps = 2/262 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A+ M + R + A L+ ++ E + + +V G E
Sbjct: 22 RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEV-GYEVGV 80
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+ ++++ G + +++ E++ + P+ + + + F K + K
Sbjct: 81 HLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHE 140
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
++ G+ Y I LCK R EA+ L M + P Y +I G+G G
Sbjct: 141 LKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGR 200
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
E A KL + GC P F L + + + AL + M K P+ ST
Sbjct: 201 FEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV-MKKDAEPNSSTYNI 259
Query: 363 LVTGLASISKVAEANELIGLMK 384
++ L +V EA ++ M+
Sbjct: 260 IIDMLCLGGRVEEAYRILDEME 281
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ AM FE+M K G +V N L+ G + N R+ + K G EP+ TYN
Sbjct: 424 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL-DLMKENGCEPDEWTYN 482
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++ F + G S EM + PN + L+ G K+ K + +L+ ME+
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN I L K R EA+ + D M+ +G+ PN+ TY LI G + G + A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+F M C P+ Y + Y LCQ G+ + A + + KG P T SL+ G
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 662
Query: 367 LASISKVAEA 376
+ ++ A
Sbjct: 663 FVVLGRIDHA 672
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSE 183
M++ A +++M G++ S+ N L+ ILSK E + I ++ + Y + P+
Sbjct: 178 MVEGARNLYKQMLNSGIQPSLLTFNTLI--NILSKKGKVREAELILSQIFQ-YDLSPDVF 234
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I C + + + + M ++ PN+ + L+ G E + ++ +L+ M
Sbjct: 235 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 294
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ GI V Y + I +LC ++ EEA L+ M RG +PN+ TY LI G + G L
Sbjct: 295 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 354
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A L+ M G P++ + LC GG + TALK+ G + + T +
Sbjct: 355 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 414
Query: 364 VTGLASISKVAEANELIGLMKKRFP 388
+ GL + +A L M K P
Sbjct: 415 IKGLCLGGDIEKAMVLFEKMLKMGP 439
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F M+ +G + N ++ G L + E+ +F + K+ G P TYN +I
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM-GPLPTVVTYNTLI 450
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ G+ ++ +L M+ P+ + L++GF K K E Q M +CG+
Sbjct: 451 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 510
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I K + + A +LL M G PN+++Y +I+G KE A+K+
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P+ + LC+ G + A K+ + +P+ T SL+ GL
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630
Query: 370 ISKVAEANELIGLMKKR 386
K EA L+ M+++
Sbjct: 631 EGKADEAEILLKEMERK 647
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 134/310 (43%), Gaps = 2/310 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+++ ++ L H +L+ +K R R N + + I + ++ A+ + +
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKR-GCRPNVQTYTALISGLSRLGKLEVAIGLYHK 363
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K GL + NAL+ + + +IF + + +G N++TYN++IK C G
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIF-HWMEGHGSLANTQTYNEIIKGLCLGG 422
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D + +M + P + L+ G+ + + ++L +M++ G YN
Sbjct: 423 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 482
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ K + E A M+ G+ PN +Y LI G K+G ++ A L M
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
GC P+ + L + + A K+C + +G +P+ T +L+ GL + A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 377 NELIGLMKKR 386
++ M+KR
Sbjct: 603 FKIFHDMEKR 612
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 109/259 (42%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A ++ +Y L V +L+LG ++N + +F K G +PNS TY+
Sbjct: 214 VREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK-EGCDPNSVTYS 272
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G +L EM K I P + L + E+ +++ M+K
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V Y I L +L + E A L ML G+ PN TY LI+ G A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+F M G ++ + LC GG+ E A+ + + G +P T +L+ G
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 367 LASISKVAEANELIGLMKK 385
+ V A L+ LMK+
Sbjct: 453 YLTKGNVNNAARLLDLMKE 471
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 9/270 (3%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N R+LD+ P D ++ VS S+ + S +E+ L N
Sbjct: 460 NNAARLLDLMKENGCEP----DEWTYNELVSGFSKWGKLESASFYFQEM-VECGLNPNPV 514
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+ I + + +D A+ + M++ G +V++ NA++ G + E ++I +
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G+ PN TY +I C +G + + I +M ++ PN + L+ G +E K
Sbjct: 575 VE-QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
++ +L+ ME+ G+A + I L R + A LL M+ G KPN TY
Sbjct: 634 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSV 693
Query: 293 LIHGFGKEGNLEGAKKLFASMTNG--GCEP 320
L+ G KE L +K+F + N GC P
Sbjct: 694 LLKGLQKEC-LLLEEKIFPLVDNYFLGCNP 722
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 1/188 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM + GL + + AL+ G + + ++ G PN E+YN VI
Sbjct: 501 FQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM-GCNPNVESYNAVINGLS 559
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ S I +M + + PN + L+ G + + + K+ MEK +
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I LC+ +++EA+ LL M +G+ P+ T+ LI GF G ++ A L M
Sbjct: 620 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679
Query: 314 TNGGCEPD 321
+ GC+P+
Sbjct: 680 VDMGCKPN 687
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL K E + + M GI + +N I L K + EA+ +L +
Sbjct: 169 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 228
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P++ TY LI G + NL+ A +F M GC+P+S + LC G + AL
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + KG P T +T L +I EA EL+ MKKR
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 234 EDVGKVLQMM-EKCGIASGVNVY--NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
E++ +V + E G+ G ++Y N + L K + E A+ L ML+ GI+P+L T+
Sbjct: 142 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 201
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI+ K+G + A+ + + + PD + + C+ + A V +
Sbjct: 202 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 261
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELI 380
+G P+ T +L+ GL + +V EA +++
Sbjct: 262 EGCDPNSVTYSTLINGLCNEGRVDEALDML 291
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 149/312 (47%), Gaps = 3/312 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+++ + ++KL ++ F+ + Q+L +L+ E + I YG+A + D A+QTFE
Sbjct: 44 LSYDLIITKLGRSRMFHEMEQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFE 103
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+ ++ +++V +LN+LL + K +E+ I + K P+ TYN +I + C S
Sbjct: 104 SIPEFRCQRTVKSLNSLLNALLKCKEFEKFDGILSGIDKF--ATPDVCTYNVLINACCSS 161
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNV 254
G +++ EM RK + PN FG L++G + + ++ ++ + M K + V
Sbjct: 162 GSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFV 221
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y ++ LC++ A L M++ ++ + Y LI K G + + M
Sbjct: 222 YASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMR 281
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC+PD+ + C ++E A V +AKG P + +++GL K
Sbjct: 282 ENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWR 341
Query: 375 EANELIGLMKKR 386
EAN+L M +R
Sbjct: 342 EANDLFEDMPRR 353
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 123/272 (45%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F+EM + + +V L+ G +E R+ + KV+ ++PN+ Y +
Sbjct: 166 DAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRLKEDMVKVFNVKPNAFVYASL 225
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + S + + EM +R ++ + L+A +K + ++V VL+ M + G
Sbjct: 226 MKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMRENGC 285
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
YN I C K E A +L+ M+++G KP++ +Y +I G KEG A
Sbjct: 286 KPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREAND 345
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M GC PD + + LC+G ++ A + + KG+ P ++ V L
Sbjct: 346 LFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASKTKFVEALC 405
Query: 369 SISKVAEANELIGLMKKRFPKSGDMWNAALPR 400
+ +++ + K GD W+ A+ +
Sbjct: 406 QEGNLELLCKVLNSLVKGNVIDGDAWSLAVSK 437
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 150/313 (47%), Gaps = 5/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L +A ++ +LL E+ R + NE I + Q +I+ A+
Sbjct: 352 DTISYTTVLKGLCRAERWDDAKELLNEM-VRNNCPPNEVTFNTFICILCQKGLIEQAIML 410
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M ++G V NAL+ G + + + +F P +PN+ TY ++ C
Sbjct: 411 IEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP----CKPNTITYTTLLTGLC 466
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ ++AEM R PN F +L++ F ++ E+ ++++ M + G +
Sbjct: 467 NAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLI 526
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + + K SE+A LL G++S+G+ P++ T+ +I KE +E A +LF +
Sbjct: 527 TYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVV 586
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G P + + LC+ E + A+ ++ G +P+ ST L+ GLA +
Sbjct: 587 QDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 646
Query: 374 AEANELIGLMKKR 386
EA +L+ ++ R
Sbjct: 647 KEAQDLLSVLCSR 659
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 156/383 (40%), Gaps = 36/383 (9%)
Query: 28 SAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQ 87
S EA + + K + R S+ R+L A+ SP+D A++ V+ +
Sbjct: 68 SCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLR----AAEGSGSPVDVFAYNTLVAGYCR 123
Query: 88 ANHFNAISQLLEELKTRPD---------------------------LRQNERFHVHSIVL 120
H +A +L+ + PD LR+ + +V + +
Sbjct: 124 YGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 183
Query: 121 YGQA----NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
+A + + AM +EM G ++ N ++ G ++ + + P Y
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS-Y 242
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P++ +Y ++K C S V + AEM K+ PN F +L+ F + E
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERA 302
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL+ M + G A+ + NI I S+CK R ++A LL+ M S G P+ +Y ++ G
Sbjct: 303 IQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKG 362
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ + AK+L M C P+ F F LCQ G E A+ + G
Sbjct: 363 LCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVG 422
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T +LV G + A EL
Sbjct: 423 VVTYNALVNGFCVQGHIDSALEL 445
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 4/239 (1%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
V A N L+ G + + +R+ P + P++ TY +I+ C+ G + S+
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMP----VAPDAYTYTPLIRVLCDRGRVADALSL 165
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L +M R+ +PN + +LL + +E VL M G + YN+ I +C+
Sbjct: 166 LDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCR 225
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
R ++A+ LL+ + S G +P+ +Y L+ G + ++LFA M C P+
Sbjct: 226 EGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT 285
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
F M F C+GG E A++V G + + ++ + +V +A +L+ M
Sbjct: 286 FDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM 344
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +PN TY ++++ C + ++L EMR K PN + +++ G +E + +D
Sbjct: 173 GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 232
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L + G Y ++ LC KR ++ + L M+ + PN T+ LI
Sbjct: 233 RELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F + G +E A ++ MT GC ++ + +C+ G + A K+ + G P
Sbjct: 293 FCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPD 352
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
+ +++ GL + +A EL+ M +
Sbjct: 353 TISYTTVLKGLCRAERWDDAKELLNEMVR 381
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 3/210 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ K+I++ C G +S +L + + L+AG+ + +
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M +A Y I+ LC R +A +LLD ML RG +PN+ TY L+
Sbjct: 131 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ E A + M GC P+ + + +C+ G + A ++ + G+ P
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +L+ GL + + + EL M ++
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEK 277
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQT 133
+ ++ V+ H ++ +L + +P+ ++ +L G N +D A +
Sbjct: 424 VTYNALVNGFCVQGHIDSALELFRSMPCKPNT------ITYTTLLTGLCNAERLDGAAEL 477
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM + +V N +L+ K + E E +G PN TYN ++
Sbjct: 478 VAEMLRGDCPPNVVTFN-VLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGIT 536
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ S +L + K + P+ F ++ KE + E+ ++ +++ G+
Sbjct: 537 KDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAV 596
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VYN + LCK + A M+S G PN TY LI G EG L+ A+ L + +
Sbjct: 597 VYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVL 656
Query: 314 TNGG 317
+ G
Sbjct: 657 CSRG 660
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 34/293 (11%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE--------- 171
Y +A +D A+ TF M+KYG+ ++ A N+LL SKN + + IF +
Sbjct: 146 YARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGRFSPDA 205
Query: 172 ---------------FPK---VY------GIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
PK VY G +P+ TY ++ S C++G ++ +
Sbjct: 206 KTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQD 265
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + +P + +L+ + E + ED M+K GI V VYN + + CK+K+
Sbjct: 266 MTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKK 325
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+ A ++D M GI PN T+ +++ G + A ++F M C+PDS + M
Sbjct: 326 FDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTM 384
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ E ALKV + K ++P T L+ GL +V++A L+
Sbjct: 385 MIKMFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLL 437
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 9/258 (3%)
Query: 143 RQSVDALNALLLGCILSK-----NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
RQ V +N G I+ K +E F K YG+ PN +N ++ + C+S +
Sbjct: 130 RQGV--VNVETFGIIMRKYARAQKVDEAVYTFNVMEK-YGVVPNLAAFNSLLCALCKSKN 186
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
I +M + P+A + +LL G+ + + KV M G + Y I
Sbjct: 187 VRKAQEIFEQMNGR-FSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGI 245
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ SLCK R EEA ++ M SRG +P Y L+H +G E +E A F M G
Sbjct: 246 MVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDG 305
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
PD + C+ +++ A +V G P+ T ++ L S+ K EA
Sbjct: 306 IVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISLGKDDEAY 365
Query: 378 ELIGLMKKRFPKSGDMWN 395
+ M KR D +
Sbjct: 366 RVFRRMIKRCQPDSDTYT 383
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 90/179 (50%), Gaps = 2/179 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +++ V+ S + ++ ++A MRR+ + N FG+++ + + K ++
Sbjct: 97 GCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGV-VNVETFGIIMRKYARAQKVDEA 155
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+MEK G+ + +N + +LCK K +A+ + + M R P+ TY L+ G
Sbjct: 156 VYTFNVMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTYSILLEG 214
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+G+ NL +K+++ M + GC+PD + + LC+ G E A+ V + ++G P
Sbjct: 215 WGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQP 273
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 7/230 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D + + I V L + +++++ +R Q F ++S+++ YG I+ A+
Sbjct: 239 DIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGC--QPTTF-IYSVLVHTYGVEMRIEDAV 295
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
TF +M K G+ V NAL+ K ++ R+ + +GI PNS T+N ++
Sbjct: 296 ATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEG-HGITPNSRTWNIILNK 354
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
G Y + M ++ +P++ + +++ F + + E KV + M
Sbjct: 355 LISLGKDDEAYRVFRRMIKRC-QPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPS 413
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
++ +++ I LC +A LL+ M+ +GI+P T+ L KEG
Sbjct: 414 MHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG 463
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 1/299 (0%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ KL FN + LL E+++ D E +V ++ YG+ I A+ TFE MD +
Sbjct: 126 LQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFN 185
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
SV + NA++ + + + +++ K +E + TY IKSFC +G +
Sbjct: 186 CDPSVYSYNAIMNILVEFGYFNQAHKVYMRM-KDKKVESDVYTYTIRIKSFCRTGRPYAA 244
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+L M NA + ++ GFY+ + ++ M +C + V +N + +
Sbjct: 245 LRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHA 304
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCK E++ L D +L RG+ PNL T+ I G KEG+L+ A +L ++ G PD
Sbjct: 305 LCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPD 364
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ LC+ A + + G+ P+ T S++ G V +AN ++
Sbjct: 365 VVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRIL 423
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 136/318 (42%), Gaps = 54/318 (16%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALL-----LGCILSKNYEE 164
SI++Y Q +I A+Q EM + G + + N ++ +GC+ N+
Sbjct: 469 SIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
I G P+ TYN ++ +C S ++ M + + P+ + LL
Sbjct: 529 GDAI------TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G K K E+V ++ + M + G A + YN I+SLC K+ EA LL M S+G+
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642
Query: 285 PNLDTYKHLIHGFGKEGNLEGAK------------------------------------K 308
P++ ++ LI GF K G+L+GA +
Sbjct: 643 PDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALR 702
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF+ M GC+PD+Y + + C+ G K ++ KG++P +T ++ L
Sbjct: 703 LFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLC 762
Query: 369 SISKVAEANELIGLMKKR 386
KV EA +I LM ++
Sbjct: 763 VEHKVQEAVGIIHLMVQK 780
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TY ++ FC+ GD ++ + K +RP+ + L+ G ++
Sbjct: 430 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 489
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M + G + YN+ I LCK+ +A L+ +++G P++ TY L+ G
Sbjct: 490 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 549
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ ++ L+ A +L M + G PD + LC+ + E +++ +A KG P+
Sbjct: 550 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +++ L + KV EA +L+G MK +
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSK 639
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ T+NK++ + C+ G + ++ ++ + PN F + + G KE + ++
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L + + G+ V YN I LC+ R EA+ L M++ G +PN TY +I G+ K
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+G + A ++ G +PD + + CQ G+ + A+ V + + KG P
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+L+ GL + A +L+ M ++ K D+W L
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKP-DIWTYNL 510
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 1/254 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + F+EM + L V N L+ E +R+F + K G+ PN T+N
Sbjct: 277 DRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLK-RGVCPNLFTFNI 335
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
I+ C+ G +L + R+ +RP+ + ++ G ++ + + + L M G
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG 395
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
YN I CK +A +L + +G KP+ TY L++GF ++G+ + A
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAM 455
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+F G P + LCQ G AL++ KG P T ++ GL
Sbjct: 456 AVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGL 515
Query: 368 ASISKVAEANELIG 381
+ +++AN LIG
Sbjct: 516 CKMGCLSDANHLIG 529
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 116/275 (42%), Gaps = 15/275 (5%)
Query: 85 LSQANHF--NAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYG 141
LS ANH +AI++ PD+ F +++V Y + +D A++ M G
Sbjct: 521 LSDANHLIGDAITK-----GCIPDI-----FTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+ V N LL G + EEV IF + G PN TYN +I+S C S +
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE-KGCAPNIITYNTIIESLCNSKKVNEA 629
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGIASGVNVYNIRIQ 260
+L EM+ K + P+ FG L+ GF K + + + MEK ++ YNI I
Sbjct: 630 VDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+ + + A L M G P+ TY+ LI GF K GN+ K G P
Sbjct: 690 AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F LC + + A+ + + K VP
Sbjct: 750 SLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVP 784
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ YN +IK C+ G ++ EM K +P+ + L++ G K D
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 524
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ G + YN + C+ + + A L++ M S+G+ P++ TY L++G
Sbjct: 525 NHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNG 584
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K E ++F +MT GC P+ + LC + A+ + +KG P
Sbjct: 585 LCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPD 644
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
+ +L+TG + + A L M+K++ S
Sbjct: 645 VVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVS 678
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ EM GL V + L+ G + + +F K Y + + TYN
Sbjct: 626 VNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYN 685
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-VLQMMEK 245
+I +F E + + +EM++ P+ + +L+ GF K K +L+ +EK
Sbjct: 686 IIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK 745
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
G + + + LC + +EA ++ M+ + I P+
Sbjct: 746 -GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD 785
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 5/275 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ FE++ YG V + + L+ G + E IF K G ++
Sbjct: 274 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM-KQQGFALDA 332
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN V+ FC+SG Y IL EM+ K ++P +G ++ G K + ++ + +
Sbjct: 333 RAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE 392
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ GI V +Y+ I K+ R +EA +L+ M+ +G+ PN+ T+ L+ K
Sbjct: 393 AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEE 452
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A F SM C P++Y + + LC+ +Y A + +G VP+ T +
Sbjct: 453 INEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 512
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
+++GLA + + +A L +RF +G + +AA
Sbjct: 513 MISGLAKVGNITDAYSLF----ERFKANGGIPDAA 543
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 135/328 (41%), Gaps = 8/328 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L +A +L +++ + ++ I+ YG A + A +
Sbjct: 17 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM-IMGYGSAGRFEDAYKL 75
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E + + G SV + N++L + +E +F K EPNS TYN +I C
Sbjct: 76 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK--DAEPNSSTYNIIIDMLC 133
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G Y IL EM S+ PN +++ K K E+ K+ + + G
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I L K + +EA L + ML G N Y LI F G E K+F +
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253
Query: 314 TNGGCEPDSYCFFMFTYFLC--QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
GC+PD + TY C + GE E + + G++P + L+ GL
Sbjct: 254 IRRGCKPD--LTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAG 311
Query: 372 KVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ E + + MK++ F +NA +
Sbjct: 312 QARETSNIFHAMKQQGFALDARAYNAVV 339
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 2/252 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + L++A S + +K + + R + + + ++ + A +
Sbjct: 296 DVRSYSILIHGLTKAGQARETSNIFHAMKQQ-GFALDARAYNAVVDGFCKSGKVHKAYEI 354
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM + ++ +V A++ G +E +F E K GIE N Y+ +I F
Sbjct: 355 LEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVVLYSSLIDGFG 413
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y IL EM +K + PN + LL K + + Q M++
Sbjct: 414 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 473
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I I LC++++ +A M +G+ PN+ TY +I G K GN+ A LF
Sbjct: 474 TYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERF 533
Query: 314 TNGGCEPDSYCF 325
G PD+ F
Sbjct: 534 KANGGIPDAASF 545
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+ F E K G++P+ +Y +I C++G + A+M + P A + ++ G
Sbjct: 4 KFFHEL-KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 62
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ ++ED K+L+ + + G V +N + L K ++ +EA +L + ++ + +PN
Sbjct: 63 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFE-VMKKDAEPN 121
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
TY +I G +E A ++ M + P+ + LC+ + E A K+
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
++ +G P T SL+ GL +V EA L M
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKM 218
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 108/277 (38%), Gaps = 2/277 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A + FE + G +L+ G +E R+F + G N
Sbjct: 169 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA-GHNANP 227
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I++F G + I E+ R+ +P+ T + +K + E + +
Sbjct: 228 VVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFED 287
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ G V Y+I I L K ++ E + M +G + Y ++ GF K G
Sbjct: 288 IRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGK 347
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A ++ M +P + L + + A + + +KG + S
Sbjct: 348 VHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSS 407
Query: 363 LVTGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
L+ G + ++ EA ++ +MKK + WN+ L
Sbjct: 408 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLL 444
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 1/178 (0%)
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ E++ + ++P+ + ++ K + + ++ ME YN I
Sbjct: 3 WKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG 62
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
R E+A LL+ + RG P++ ++ ++ GK+ ++ A LF M EP+
Sbjct: 63 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPN 121
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
S + + LC GG E A ++ P+ T+ +V L K+ EA ++
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
++G+KP+ +Y +I K G L A++LFA M P +Y + G +E
Sbjct: 11 AQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFE 70
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
A K+ +G +P + S++T L KV EA L +MKK + +N
Sbjct: 71 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYN 126
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 8/316 (2%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MID 128
SP D + +S ++ +A F +LL+E++ R + N V++ ++ G + +D
Sbjct: 30 SP-DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNA---VYNTIIKGLCDNGRVD 85
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ + +M ++ SV L+ S + I + + G PN TYN +
Sbjct: 86 SALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEA-GCAPNVVTYNTL 143
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I FC+ G+ + +M S P+ + +L+ G+ K+ + +D K+LQ M K G
Sbjct: 144 INGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 203
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
YN + SL K + +A L ML R KP+ T+ +I F K G L+ A +
Sbjct: 204 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 263
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF MT+ GC PD Y + + C+ + A ++ G P T S+V+GL
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323
Query: 369 SISKVAEANELIGLMK 384
S+V EA E+ +++
Sbjct: 324 KASQVDEAYEVYEVLR 339
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 1/207 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+S TY+ +I FC++ D Y +L EM ++ I P+ + ++ G + +
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M++ A V Y I + +LCK R +A +L+ M+ G PN+ TY LI+GF K
Sbjct: 91 YRDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
GN++ A LF M C PD + + + C+ + K+ + + G P+F T
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+L+ L K +A L +M +R
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRR 236
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 2/237 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
+ L+ G ++++++ R+ E K GI P++ YN +IK C++G S +M+
Sbjct: 37 STLINGFCKARDFQQAYRLLDEMEK-RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 95
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R P+ + +L+ K + D +L+ M + G A V YN I CKL +
Sbjct: 96 RHC-APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 154
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L + ML P++ TY LI G+ K+ + KL M GCEP+ +
Sbjct: 155 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 214
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L + G+Y A + + + + P T ++ + ++ A EL LM R
Sbjct: 215 DSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 271
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 1/253 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM KYG + N L+ + S Y + + + +P+ T+N +I FC
Sbjct: 195 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR-RDCKPSHFTFNLMIDMFC 253
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y + M + P+ + ++++G + ++ +D ++L+ M + G V
Sbjct: 254 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 313
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + LCK + +EA + + + + G ++ T LI G K L+ A+KL M
Sbjct: 314 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 373
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD + + + C+ + + +L + KG VP T ++ L ++V
Sbjct: 374 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 433
Query: 374 AEANELIGLMKKR 386
+ L+ M +R
Sbjct: 434 RDGCMLLKTMLER 446
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYG 141
K+ Q + + QL+ + PD+ + ++I++ G +AN ID A Q E M + G
Sbjct: 254 KVGQLDLAYELFQLMTDRGCLPDI------YTYNIMISGACRANRIDDARQLLERMTEAG 307
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
V N+++ G + +E ++ E + G + T + +I C+S
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVY-EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 366
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE-DVGKVLQMMEKCGIASGVNVYNIRIQ 260
+L EM R P+ + +L+ GF K + + + +M++K G V Y+I I
Sbjct: 367 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK-GCVPTVITYSIVID 425
Query: 261 SLCKLKRSEEAKALLDGMLSRGI 283
LCK R + LL ML RG+
Sbjct: 426 KLCKSARVRDGCMLLKTMLERGV 448
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 148/310 (47%), Gaps = 8/310 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMIDH 129
L+++++ ++ L + A+++LL +L+ +PD+ +HS+ + ++
Sbjct: 166 LNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI-IHSLC---KNKLLGD 221
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM G+ +V NAL+ G + + +E + E K+ I P+ T+N +I
Sbjct: 222 ACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM-KLKNINPDVCTFNTLI 280
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + G + +LA M + I+P+ + L+ G++ +K ++ V M + G+
Sbjct: 281 DALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVT 340
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I LCK K +EA +L + M + + P++ TY LI G K +LE A L
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G +PD Y + + LC+GG E A + + + KG+ + T ++ GL
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCK 460
Query: 370 ISKVAEANEL 379
EA +L
Sbjct: 461 ADLFGEAMDL 470
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K ++ V L+ G L + K +F ++ G+ PN + Y +I C+
Sbjct: 532 MTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQM-GVTPNVQCYTIMIDGLCKKK 590
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+ EM+ K++ PN + L+ K H E +L+ M++ GI V Y
Sbjct: 591 TVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYT 650
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + LCK R E AK + +L +G N+ Y +I+ K G + A L M +
Sbjct: 651 ILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDK 710
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
GC PD+ F + + L + E + A K+ +A+G +
Sbjct: 711 GCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 1/216 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K ++ V N+L+ G + K +F + G+ PN TY +I C+
Sbjct: 299 MMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQS-GVTPNVRTYTTMIDGLCKEK 357
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+ EM+ K++ P+ + L+ G K H E + + M++ GI V Y
Sbjct: 358 MVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYT 417
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + +LCK R E AK +L +G N+ TY +I+G K A L + M
Sbjct: 418 ILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGK 477
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
GC PD+ F L + E + A K+ R +A+G
Sbjct: 478 GCMPDAITFKTIICALFEKDENDKAEKILREMIARG 513
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+LA M + I+P+ +G L+ G++ ++ + V M + G+ V Y I I LC
Sbjct: 528 VLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLC 587
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
K K +EA +L + M + + PN+ TY LI K +LE A L M G +PD Y
Sbjct: 588 KKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVY 647
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + LC+ G E A ++ + + KG+ + +++ L EA +L
Sbjct: 648 SYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDL 703
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 135/315 (42%), Gaps = 29/315 (9%)
Query: 77 AFSIAVSKLSQANHFNAIS--QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
AFS+ + L + H NAI+ L++ L R ++++ FH + Q N + +
Sbjct: 117 AFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSY----- 171
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
L+ G + + V R+ + + ++P+ YN +I S C+
Sbjct: 172 ---------------RTLINGLCKTGETKAVARLLRKLEG-HSVKPDVVMYNTIIHSLCK 215
Query: 195 S---GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+ GD+ +YS EM K I PN + L+ GF ++ +L M+ I
Sbjct: 216 NKLLGDACDLYS---EMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPD 272
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V +N I +L K + + AK +L M+ IKP++ TY LI G+ ++ AK +F
Sbjct: 273 VCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFY 332
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
SM G P+ + LC+ + A+ + K +P T SL+ GL
Sbjct: 333 SMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNH 392
Query: 372 KVAEANELIGLMKKR 386
+ A L MK++
Sbjct: 393 HLERAIALCKKMKEQ 407
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 38/264 (14%)
Query: 149 LNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEM 208
N +L + +K+Y V +F +F + G P+ T N ++ FC + +S+LA +
Sbjct: 66 FNYILSSLVNNKHYPTVISLFKKF-ESNGATPDLCTLNILMNCFCHLTHITFAFSVLANI 124
Query: 209 RRKSIRPNA-----------------------------------TDFGLLLAGFYKEHKY 233
++ PNA + L+ G K +
Sbjct: 125 LKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGET 184
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ V ++L+ +E + V +YN I SLCK K +A L M+ +GI PN+ TY L
Sbjct: 185 KAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNAL 244
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
++GF G+L+ A L M PD F L + G+ + A K+ A M K
Sbjct: 245 VYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAA-KIVLAVMMKAC 303
Query: 354 V-PHFSTMKSLVTGLASISKVAEA 376
+ P T SL+ G ++KV A
Sbjct: 304 IKPDVVTYNSLIDGYFFLNKVKNA 327
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 6/214 (2%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I+P+ TY ++ + + + M + + PN + +++ G K+ ++
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAM 596
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ + M+ + + Y I +LCK E A ALL M GI+P++ +Y L+ G
Sbjct: 597 SLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGL 656
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G LEGAK++F + G + + LC+ G ++ AL + KG +P
Sbjct: 657 CKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDA 716
Query: 358 STMKSLVTGLASISKVAEANELI------GLMKK 385
T ++ L + +A +++ GLMK+
Sbjct: 717 VTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N + +A F M + G+ +V ++ G K +E +F E K + P+ T
Sbjct: 322 NKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM-KYKNMIPDIVT 380
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +I C++ ++ +M+ + I+P+ + +LL K + E+ + Q +
Sbjct: 381 YTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLL 440
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG-FGKEGN- 302
G V YN+ I LCK EA L M +G P+ T+K +I F K+ N
Sbjct: 441 VKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDEND 500
Query: 303 ---------------------LEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYE 339
L+ AK + A MT +PD +Y M YFL E +
Sbjct: 501 KAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN--ELK 558
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
A V + G P+ ++ GL V EA L MK + FP
Sbjct: 559 HAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFP 609
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 68/205 (33%), Gaps = 35/205 (17%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P F +L+ Y V + + E G + NI + C L A ++
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 275 LDGMLSRGIKPNLDT-----------------------------------YKHLIHGFGK 299
L +L RG PN T Y+ LI+G K
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + +L + +PD + + LC+ A + + KG P+ T
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240
Query: 360 MKSLVTGLASISKVAEANELIGLMK 384
+LV G + + EA L+ MK
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMK 265
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ AM FE+M K G +V N L+ G + N R+ + K G EP+ TYN
Sbjct: 466 IEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL-DLMKENGCEPDEWTYN 524
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++ F + G S EM + PN + L+ G K+ K + +L+ ME+
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN I L K R EA+ + D M +G+ PN+ TY LI G + G + A
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+F M C P+ Y + Y LCQ G+ + A + + KG P T SL+ G
Sbjct: 645 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 704
Query: 367 LASISKVAEA 376
+ ++ A
Sbjct: 705 FVVLGRIDHA 714
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSE 183
M++ A +++M G++ S+ N L+ ILSK E + I ++ + Y + P+
Sbjct: 220 MVEGARNLYKQMLNSGIQPSLLTFNTLI--NILSKKGKVREAELILSQIFQ-YDLSPDVF 276
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I C + + + + M ++ PN+ + L+ G E + ++ +L+ M
Sbjct: 277 TYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEM 336
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ GI V Y + I +LC ++ EEA L+ M RG +PN+ TY LI G + G L
Sbjct: 337 IEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKL 396
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A L+ M G P++ + LC GG + TALK+ G + + T +
Sbjct: 397 EVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEI 456
Query: 364 VTGLASISKVAEANELIGLMKKRFP 388
+ GL + +A L M K P
Sbjct: 457 IKGLCLGGDIEKAMVLFEKMLKMGP 481
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F M+ +G + N ++ G L + E+ +F + K+ G P TYN +I
Sbjct: 434 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM-GPLPTVVTYNTLI 492
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ G+ ++ +L M+ P+ + L++GF K K E Q M +CG+
Sbjct: 493 NGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLN 552
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I K + + A +LL+ M G PN+++Y +I+G KE A+K+
Sbjct: 553 PNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 612
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P+ + LC+ G + A K+ + +P+ T SL+ GL
Sbjct: 613 CDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 672
Query: 370 ISKVAEANELIGLMKKR 386
K EA L+ M+++
Sbjct: 673 EGKADEAEILLKEMERK 689
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 157/404 (38%), Gaps = 66/404 (16%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N R+LD+ P D ++ VS S+ + S +E+ L N
Sbjct: 502 NNAARLLDLMKENGCEP----DEWTYNELVSGFSKWGKLESASFYFQEM-VECGLNPNPV 556
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+ I + + +D A+ E M++ G +V++ NA++ G + E ++I +
Sbjct: 557 SYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 616
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G+ PN TY +I C +G + + I +M ++ PN + L+ G +E K
Sbjct: 617 AE-QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
++ +L+ ME+ G+A + I L R + A LL M+ G KPN TY
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSV 735
Query: 293 LIHGFGKEG------------------------NLEGAKKLFASMTNGGCEP--DSY--- 323
L+ G KE N E L A M+ GCEP D+Y
Sbjct: 736 LLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTL 795
Query: 324 ------------------------------CFFMFTYFLCQGGEYETALKVCRASMAKGW 353
++ C+ E + ALK+ + AKG+
Sbjct: 796 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 855
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI-GLMKKRFPKSGDMWNA 396
H S ++L+ L +V EA L +++K + +W
Sbjct: 856 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTV 899
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 2/310 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+++ ++ L H +L+ +K R R N + + I + ++ A+ + +
Sbjct: 347 TYTLPITALCAIEHEEEAIELVARMKKR-GCRPNVQTYTALISGLSRLGKLEVAIGLYHK 405
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K GL + NAL+ + + +IF + + +G N++TYN++IK C G
Sbjct: 406 MLKEGLVPNTVTYNALINELCVGGRFSTALKIF-HWMEGHGSLANTQTYNEIIKGLCLGG 464
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D + +M + P + L+ G+ + + ++L +M++ G YN
Sbjct: 465 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 524
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ K + E A M+ G+ PN +Y LI G K+G ++ A L M
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
GC P+ + L + + A K+C +G +P+ T +L+ GL + A
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644
Query: 377 NELIGLMKKR 386
++ M+KR
Sbjct: 645 FKIFHDMEKR 654
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+Y L V +L+LG ++N + +F K G +PNS TY+ +I C G
Sbjct: 268 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK-EGCDPNSVTYSTLINGLCNEGRV 326
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+L EM K I P + L + E+ +++ M+K G V Y
Sbjct: 327 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL 386
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I L +L + E A L ML G+ PN TY LI+ G A K+F M G
Sbjct: 387 ISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGS 446
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
++ + LC GG+ E A+ + + G +P T +L+ G + V A
Sbjct: 447 LANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR 506
Query: 379 LIGLMKK 385
L+ LMK+
Sbjct: 507 LLDLMKE 513
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 113/281 (40%), Gaps = 25/281 (8%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F +M+K ++ ++L+ G +E + + E + G+ P+ T+ +I
Sbjct: 644 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER-KGLAPDEVTFTSLI 702
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE------------------- 230
F G + +L M +PN + +LL G KE
Sbjct: 703 DGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFS 762
Query: 231 -HK----YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
H+ +E V +L M + G ++ Y+ + LC+ R EA+ L+ M RG P
Sbjct: 763 PHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 822
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ + Y L+ K ++ A K+F S+ G + + LC+ G+ E A +
Sbjct: 823 DREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALF 882
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ K W LV GL ++ +L+ +M+ +
Sbjct: 883 DNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESK 923
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 25/219 (11%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG----CILSK--------------------NY 162
IDHA M G + + + LL G C+L + N+
Sbjct: 711 IDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNF 770
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
E V + ++ G EP +TY+ ++ C G ++ +M+ + P+ +
Sbjct: 771 EIVSNLLARMSEI-GCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 829
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL K + + K+ +E G +++Y I +LCK + EEA+AL D ML +
Sbjct: 830 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 889
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+ + L+ G KEG L+ KL M + P+
Sbjct: 890 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPN 928
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL K E + + M GI + +N I L K + EA+ +L +
Sbjct: 211 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 270
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P++ TY LI G + NL+ A +F M GC+P+S + LC G + AL
Sbjct: 271 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 330
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + KG P T +T L +I EA EL+ MKKR
Sbjct: 331 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 3/156 (1%)
Query: 234 EDVGKVLQMM-EKCGIASGVNVY--NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
E++ +V + E G+ G ++Y N + L K + E A+ L ML+ GI+P+L T+
Sbjct: 184 EEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTF 243
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI+ K+G + A+ + + + PD + + C+ + A V +
Sbjct: 244 NTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVK 303
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+G P+ T +L+ GL + +V EA +++ M ++
Sbjct: 304 EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK 339
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 11/312 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
+++ + L ++ + +LLEE++ PD F +H++ +A A+ F
Sbjct: 62 YAVVIQGLCKSGDLDKACELLEEMRESGPVPDA-AIYNFVIHALC---KARNTAKALDYF 117
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
M+ ++V ++ G + E F + K G PN TYN +I FC+
Sbjct: 118 RSME---CEKNVITWTIMIDGLCKANRLPEATTYFAKMKK-KGTVPNEWTYNVLINGFCK 173
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
Y +L EM+ + PN + ++ GF ++ K + K+ + M + G +
Sbjct: 174 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN + LC+ +EA LLD M RG++P+ +Y L+ G K G ++ A K+F +
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
NG C PD + LC+ G + A K+ P T +L+ GL ++
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353
Query: 375 EANELIGLMKKR 386
EA +++ M+ R
Sbjct: 354 EAQQVLETMEDR 365
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 3/275 (1%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+S V++G + +D A + F +M + G ++ N LL G + +E + E
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G++P+ +Y+ ++ C++G + + P+ + L+AG K +
Sbjct: 258 -RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
++ K+ + M + V + + LCK R +EA+ +L+ M R PN+ TY
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI G K G + A+++F M G EP+ + + C ++AL + A G
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
+P T +L+ GL + EAN L G MK +F
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 471
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 137/316 (43%), Gaps = 12/316 (3%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QA 124
+ P D +A+S ++ L +A + +L E+++ PD+ + ++ G +
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVV------TFTALMDGLCKG 349
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ + A Q E M+ +V ++L+ G + + + +F V GIEPN T
Sbjct: 350 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM-IVRGIEPNVVT 408
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I FC + S ++ EM P+ + L+ G K + + ++ M+
Sbjct: 409 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 468
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
V Y+ I CKL+R + A+ L D ML + + P++ T+ L+ G+ G ++
Sbjct: 469 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 528
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A++L M C PD Y + C+ G A +V + +G P+ T +L+
Sbjct: 529 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 588
Query: 365 TGLASISKVAEANELI 380
K A L+
Sbjct: 589 DAFCRAGKPTVAYRLL 604
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 140/321 (43%), Gaps = 2/321 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L + + Q+LE ++ R + N + I + + A +
Sbjct: 335 DVVTFTALMDGLCKGDRLQEAQQVLETMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEV 393
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M G+ +V N+L+ G ++ + + E G P+ TYN +I C
Sbjct: 394 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT-GCLPDIITYNTLIDGLC 452
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G + + +M+ K P+ + L+ GF K + + + M K + V
Sbjct: 453 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV 512
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++ ++ C ++A+ LL+ M++ P++ TY L+ GF K G + A+++ M
Sbjct: 513 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 572
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC+P+ + C+ G+ A ++ + G P+ T +SL+ G +
Sbjct: 573 AKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDL 632
Query: 374 AEANELIGLMKKRFPKSGDMW 394
EA +++ +++ DM+
Sbjct: 633 EEARKILERLERDENCKADMF 653
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 1/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A + FE+M + V AL+ G +E +++ E + PN
Sbjct: 313 KAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL-ETMEDRNCTPNV 371
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ +I C++G + M + I PN + L+ GF + + +++
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 431
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G + YN I LCK R+ EA L M ++ P++ TY LI GF K
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A+ LF M PD F C G + A ++ +A P T S
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
LV G + ++ EA ++ M KR
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKR 575
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 1/261 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++D A + +EM + GL+ + + L+ G + + ++F + P+ Y
Sbjct: 246 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN-GDCPPDVVAY 304
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ +I C++G + +MR S P+ F L+ G K + ++ +VL+ ME
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
V Y+ I LCK + +A+ + M+ RGI+PN+ TY LIHGF ++
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 424
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A L MT GC PD + LC+ G A ++ AK P T L+
Sbjct: 425 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 484
Query: 366 GLASISKVAEANELIGLMKKR 386
G + ++ A L M K+
Sbjct: 485 GFCKLERIDMARTLFDDMLKQ 505
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ++D A + EEM V +L+ G E +R+ K G +P
Sbjct: 521 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK-RGCQP 579
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I +FC +G + Y +L EM ++PN + L+ GF E+ K+L
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKIL 639
Query: 241 QMMEKC-GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ +E+ + + Y + + LC+ R A LL+ + G P D Y LI G +
Sbjct: 640 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 699
Query: 300 EGNLEGAKKLFASMT 314
L A ++ MT
Sbjct: 700 GKELGKAMEVLEEMT 714
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 32/252 (12%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R F K G + N TYN++ ++ + IL I PN + +++ G
Sbjct: 9 RFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQG 68
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA--------------- 271
K + ++L+ M + G +YN I +LCK + + +A
Sbjct: 69 LCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVIT 128
Query: 272 -KALLDG----------------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
++DG M +G PN TY LI+GF K + A L M
Sbjct: 129 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G P+ + + C+ + +TA K+ R + G +P+ T +L++GL +
Sbjct: 189 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 248
Query: 375 EANELIGLMKKR 386
EA EL+ M++R
Sbjct: 249 EAYELLDEMRER 260
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 146/325 (44%), Gaps = 12/325 (3%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQ 123
L+ +S ++ +I V + F+ ++ E++ R PD+ H++++ +
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV------THNVLIDAR 202
Query: 124 --ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
A +D A+ + M GL+ + N++L G + +++ K +F + + P+
Sbjct: 203 FRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQC-SVAPD 261
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
++N +I FC G+ EM+ + + P+ F L+ F + + + G L+
Sbjct: 262 VRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M+ G+ +Y + I C+ EA + D M+ G P++ TY L++G K+
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
L A+KL M G PD F + C+ G +E AL++ + + P T
Sbjct: 382 RLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYN 441
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
SL+ G+ +A+ANEL M R
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAR 466
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+ P+ Y VI FC +G S + EM P+ + LL G K+H+
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRL 383
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
D K+L ME+ G+ + + I C+ E A L D +L + ++P++ TY L
Sbjct: 384 LDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSL 443
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G ++G+L A +L+ M P+ + + C+ G+ E A + KG
Sbjct: 444 IDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGN 503
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
+P+ T S++ G V + + + M++ FP
Sbjct: 504 LPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFP 540
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 135/311 (43%), Gaps = 12/311 (3%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR--- 104
R S S R+ D G P D + ++ ++ L + + +LL E++ R
Sbjct: 344 RAGSMSEALRVRDEMVGFGCLP----DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PDL +H Y + ++A+Q F+ + + LR V N+L+ G + +
Sbjct: 400 PDLCTFTTL-IHG---YCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAK 455
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
++ + I PN TY+ +I S CE G + L EM +K PN + ++
Sbjct: 456 ANELWDDM-HAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G+ + + + LQ M + + + +N I K + A + + M ++
Sbjct: 515 KGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVR 574
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ TY +I+GF ++GN++ A ++F M + G EPD Y + G + A ++
Sbjct: 575 PDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQL 634
Query: 345 CRASMAKGWVP 355
+ +G+ P
Sbjct: 635 HDEMIHRGFAP 645
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 113/264 (42%), Gaps = 2/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q ++D A + EM++ G+ + L+ G N+E ++F + + P+
Sbjct: 380 QHRLLD-AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR-QRLRPDV 437
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I C GD + + +M + I PN + +L+ ++ + ED L
Sbjct: 438 VTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDE 497
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M K G + YN I+ C+ ++ + L M + P+L T+ LIHG+ KE N
Sbjct: 498 MVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEEN 557
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ GA +F M PD+ + M + G + A +V + G P T S
Sbjct: 558 MHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMS 617
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ G + +A +L M R
Sbjct: 618 LINGHVTAGNSKQAFQLHDEMIHR 641
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 132/341 (38%), Gaps = 15/341 (4%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR--- 104
R FR +D C S+AP D +F+I + + + +E++ R
Sbjct: 242 RFDKAKEVFRTMDQC---SVAP----DVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVT 294
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PD+ I L+ + +DHA EM GL ++ G + + E
Sbjct: 295 PDVVSFSCL----IGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE 350
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
R+ E +G P+ TYN ++ C+ +L EM + + P+ F L+
Sbjct: 351 ALRVRDEMVG-FGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLI 409
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G+ ++ +E+ ++ + + + V YN I +C+ +A L D M +R I
Sbjct: 410 HGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREIL 469
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
PN TY LI ++G +E A M G P+ + C+ G + +
Sbjct: 470 PNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQF 529
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ P T +L+ G + A + +M+K
Sbjct: 530 LQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 250 SGVNVY--NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
S VN Y NI + S CK + A ++ M R + P++ T+ LI + G+++ A
Sbjct: 153 SEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAI 212
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L SM N G +P + LC+ ++ A +V R P + L+ G
Sbjct: 213 ALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGF 272
Query: 368 ASISKVAEANELIGLMKKRF 387
+ +V EA + M+ R+
Sbjct: 273 CRVGEVKEAVKFYKEMQHRY 292
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 149/311 (47%), Gaps = 11/311 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + + + KL+ + + LL+++K + +E + I Y +A + A++TF
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMKLE-GISCSEDLFISVIGSYRRAGSSEQALKTFY 135
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M + ++ +V N +L + ++ + I++ K G+EPN TYN ++K+ C++
Sbjct: 136 RMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK-DGMEPNVFTYNILLKALCKN 194
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME-KCGIASGVNV 254
+ +L EM K P+ + L++ K +GKV + E V V
Sbjct: 195 NRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK------LGKVKEARELAMSFTPSVPV 248
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I +CK EEA LLD M+++GI PN+ +Y +I+ GN+E + + A M
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308
Query: 315 NGGCEPDSYCFF-MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ + F + F +GG +E AL + +G VP+ +L+ GL S +
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHE-ALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367
Query: 374 AEANELIGLMK 384
+A + M+
Sbjct: 368 GDAVSVFNQME 378
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
SV NAL+ G +EE ++ E GI+PN +Y +I + ++G+ ++
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAV 303
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
LA+M + PN F L+ GF+ + + M + G+ V YN + LC
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ +A ++ + M G PN+ TY LI G+ K G+L+GA +++ M GC P+
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVA 423
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ LC+ + A + + P+ T + + GL +V A ++ M
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483
Query: 385 KR--FPKS 390
FP +
Sbjct: 484 NSGCFPNT 491
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F +M+ G +V +AL+ G + + + ++ + +G PN Y ++
Sbjct: 370 AVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN-WMITHGCHPNVVAYTCMV 428
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C + + Y ++ M+ ++ PN F + G + + KV M G
Sbjct: 429 DVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCF 488
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + SL K +R EA L+ M RGI+ NL TY +I+G+ G L A +L
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALEL 548
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G +PD+ + C+ G+ A+++ A W P SL++G+ +
Sbjct: 549 LGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICT 608
Query: 370 ISKVAEA 376
V EA
Sbjct: 609 HIGVEEA 615
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 9/253 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDA----LNALLLGCILSKNYEEVKRIFTEFPKVY 176
Y +A +D A + + M +G +V A ++ L + ++ Y E +V
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY-----CLIENMQVE 450
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
PN+ T+N IK C SG + +M PN T + LL K+ ++ +
Sbjct: 451 NCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA 510
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ ME GI + YN I C EA LL M+ RG KP+ T +I
Sbjct: 511 FGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDA 570
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K+G + A +L ++ G PD + +C E A+ R +++G P+
Sbjct: 571 YCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPN 630
Query: 357 FSTMKSLVTGLAS 369
+T LV L S
Sbjct: 631 VATWNVLVRHLFS 643
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 123/324 (37%), Gaps = 6/324 (1%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S P P+ ++ ++ + + F QLL+E+ + + N + I A
Sbjct: 241 SFTPSVPV----YNALINGVCKEYTFEEAFQLLDEMMNK-GIDPNVISYTTIINALSDAG 295
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++ ++ +M G ++ +L+ G L E + + G+ PN Y
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIR-EGVVPNVVAY 354
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ C S+ +M PN + L+ G+ K + +V M
Sbjct: 355 NALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT 414
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y + LC+ +A L++ M PN T+ I G G ++
Sbjct: 415 HGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDW 474
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A K+F M N GC P++ + L + + A + + +G + T +++
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIY 534
Query: 366 GLASISKVAEANELIGLMKKRFPK 389
G + EA EL+G M R K
Sbjct: 535 GYCCAGMLGEALELLGKMVVRGTK 558
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I+ + V +L +M+ + I + F ++ + + E K M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ + V +YN + +L R + + M G++PN+ TY L+ K +
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+GA KL M++ GC+PD + LC+ G+ + A + +A + P +L
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE-----LAMSFTPSVPVYNAL 252
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ G+ EA +L+ M +
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNK 275
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
KS + + +++ E + + V +LQ M+ GI+ +++ I S + SE+
Sbjct: 70 KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A M +KP + Y H++ E + ++++M G EP+ + + +
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
LC+ + A K+ +KG P + +L++ L + KV EA EL F S
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL----AMSFTPS 245
Query: 391 GDMWNAAL 398
++NA +
Sbjct: 246 VPVYNALI 253
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 1/205 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + +EM + GL V A++ + R+ E K+ G +PN TYN ++
Sbjct: 308 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL-ELMKLRGCKPNVWTYNALV 366
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ FC G ++L +MR + P+A + LL+ G + E ++L++ME G+
Sbjct: 367 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 426
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I +LCK R+++A +L D + +RGIKPN T+ LI+G K G + A K
Sbjct: 427 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 486
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQ 334
M + GC PD+Y + F LC+
Sbjct: 487 LEKMVSAGCTPDTYTYSSFIEHLCK 511
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM +M G+ N L+ G + + E R+ + G+ + TYN
Sbjct: 375 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLL-RLMEGDGLIADQYTYN 433
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + C+ G + S+ + + I+PNA F L+ G K K + K L+ M
Sbjct: 434 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 493
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y+ I+ LCK+K S+E + + ML + +KP+ Y +IH KE N
Sbjct: 494 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 553
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + M + GC PD + C G A V G +L+ G
Sbjct: 554 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 613
Query: 367 LASISKVAEANELIGLM 383
ASI + A ++ M
Sbjct: 614 HASIGQTDHAVSILKQM 630
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 114/275 (41%), Gaps = 18/275 (6%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A F+ ++ G++ + N+L+ G + ++ F E G P++ TY+
Sbjct: 446 DQACSLFDSLETRGIKPNAVTFNSLING-LCKSGKADIAWKFLEKMVSAGCTPDTYTYSS 504
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
I+ C+ S S + EM +K ++P+ ++ +++ KE Y V + M G
Sbjct: 505 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 564
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V Y +++ C R EA+ +L M G+ + Y L+ G G + A
Sbjct: 565 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 624
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG--------------- 352
+ MT+ P+ + +F+ L + E L + A + K
Sbjct: 625 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 684
Query: 353 --WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
++P+ T S++ G + + EA L+ LMK+
Sbjct: 685 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 719
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 4/220 (1%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R+F + P + TYN VI+S C D + L+ M R RP+A F L+ G
Sbjct: 138 RLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVG 197
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ + ++ + + M G A V Y I+ LC+ R +EA L M +P+
Sbjct: 198 YCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM----DQPD 253
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ Y L+ G E + M G P + + F C+ + + A ++ +
Sbjct: 254 MHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQ 313
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KG P T +++ ++++A ++ LMK R
Sbjct: 314 EMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 353
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 25/268 (9%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++I + KL + ++ +++ E+ + PD+ + S+ Y ++ A
Sbjct: 537 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT----YTTSMRAYCIEGRLNEAENVL 592
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC- 193
EM K G+ A N L+ G + I + V + PN TY +++
Sbjct: 593 MEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV-PNQFTYFILLRHLVR 651
Query: 194 ----------------ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++ + + V+ + M++ PN+ + +L GF ++ + E+
Sbjct: 652 MRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEAT 711
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ +M++ I+ ++Y + CK KR +A L+ M+ G P L +Y+HL+ G
Sbjct: 712 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 771
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCF 325
EG + AK++F + PD +
Sbjct: 772 ICEGQTDKAKEIFMNSRWKDYSPDEIVW 799
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 96/245 (39%), Gaps = 20/245 (8%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+NY V R + E G P+ TY ++++C G + ++L EM + + +
Sbjct: 548 RNYGLVARTWGEMVS-SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 606
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G + + +L+ M Y I ++ L +++ E+ L +
Sbjct: 607 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 666
Query: 280 SRGIK-----------------PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ I+ PN TY ++ GF ++G E A L + M +
Sbjct: 667 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE 726
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ C+ Y A + + + G++P + + L++GL + +A E+
Sbjct: 727 DIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI--F 784
Query: 383 MKKRF 387
M R+
Sbjct: 785 MNSRW 789
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PNS TY+ +++ F E G + S+++ M+ SI N + L+ F K +Y D +
Sbjct: 689 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 748
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + G + Y + L ++++AK + + P+ +K +I G K
Sbjct: 749 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 808
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+G+ + ++++ + C P + M T
Sbjct: 809 KGHSDISREMIIMLERMNCRPSHQTYAMLT 838
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 20/272 (7%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+T+ EM G V + + E + + E K G+ ++ YN ++
Sbjct: 555 RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK-NGVTVDTMAYNTLMDG 613
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLL-----------------AGFYKEHKYE 234
G + SIL +M + PN + +LL AG +K +
Sbjct: 614 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 673
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
DV + +M+K Y+ ++ + R+EEA +L+ M I N D Y L+
Sbjct: 674 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 733
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-FMFTYFLCQGGEYETALKVCRASMAKGW 353
F K A L SM G P + + + +C+ G+ + A ++ S K +
Sbjct: 734 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICE-GQTDKAKEIFMNSRWKDY 792
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P K ++ GL + E+I ++++
Sbjct: 793 SPDEIVWKVIIDGLIKKGHSDISREMIIMLER 824
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 149/311 (47%), Gaps = 11/311 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + + + KL+ + + LL+++K + +E + I Y +A + A++TF
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMKLE-GISCSEDLFISVIGSYRRAGSSEQALKTFY 135
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M + ++ +V N +L + ++ + I++ K G+EPN TYN ++K+ C++
Sbjct: 136 RMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK-DGMEPNVFTYNILLKALCKN 194
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME-KCGIASGVNV 254
+ +L EM K P+ + L++ K +GKV + E V V
Sbjct: 195 NRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCK------LGKVKEARELAMSFTPSVPV 248
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I +CK EEA LLD M+++GI PN+ +Y +I+ GN+E + + A M
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308
Query: 315 NGGCEPDSYCFF-MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ + F + F +GG +E AL + +G VP+ +L+ GL S +
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHE-ALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367
Query: 374 AEANELIGLMK 384
+A + M+
Sbjct: 368 GDAVSVFNQME 378
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 3/248 (1%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
SV NAL+ G +EE ++ E GI+PN +Y +I + ++G+ ++
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMN-KGIDPNVISYTTIINALSDAGNVELSLAV 303
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
LA+M + PN F L+ GF+ + + M + G+ V YN + LC
Sbjct: 304 LAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCS 363
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ +A ++ + M G PN+ TY LI G+ K G+L+GA +++ M GC P+
Sbjct: 364 KRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVA 423
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ LC+ + A + + P+ T + + GL +V A ++ M
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483
Query: 385 KR--FPKS 390
FP +
Sbjct: 484 NSGCFPNT 491
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F +M+ G +V +AL+ G + + + ++ + +G PN Y ++
Sbjct: 370 AVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWN-WMITHGCHPNVVAYTCMV 428
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C + + Y ++ M+ ++ PN F + G + + KV M G
Sbjct: 429 DVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCF 488
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + SL K +R EA L+ M RGI+ NL TY +I+G+ G L A +L
Sbjct: 489 PNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALEL 548
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G +PD+ + C+ G+ A+++ A W P SL++G+ +
Sbjct: 549 LGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICT 608
Query: 370 ISKVAEA 376
V EA
Sbjct: 609 HIGVEEA 615
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 9/253 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDA----LNALLLGCILSKNYEEVKRIFTEFPKVY 176
Y +A +D A + + M +G +V A ++ L + ++ Y E +V
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY-----CLIENMQVE 450
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
PN+ T+N IK C SG + +M PN T + LL K+ ++ +
Sbjct: 451 NCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA 510
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ ME GI + YN I C EA LL M+ RG KP+ T +I
Sbjct: 511 FGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDA 570
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K+G + A +L ++ G PD + +C E A+ R +++G P+
Sbjct: 571 YCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPN 630
Query: 357 FSTMKSLVTGLAS 369
+T LV L S
Sbjct: 631 VATWNVLVRHLFS 643
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 123/324 (37%), Gaps = 6/324 (1%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S P P+ ++ ++ + + F QLL+E+ + + N + I A
Sbjct: 241 SFTPSVPV----YNALINGVCKEYTFEEAFQLLDEMMNK-GIDPNVISYTTIINALSDAG 295
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++ ++ +M G ++ +L+ G L E + + G+ PN Y
Sbjct: 296 NVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIR-EGVVPNVVAY 354
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ C S+ +M PN + L+ G+ K + +V M
Sbjct: 355 NALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT 414
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y + LC+ +A L++ M PN T+ I G G ++
Sbjct: 415 HGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDW 474
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A K+F M N GC P++ + L + + A + + +G + T +++
Sbjct: 475 AIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIY 534
Query: 366 GLASISKVAEANELIGLMKKRFPK 389
G + EA EL+G M R K
Sbjct: 535 GYCCAGMLGEALELLGKMVVRGTK 558
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I+ + V +L +M+ + I + F ++ + + E K M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ + V +YN + +L R + + M G++PN+ TY L+ K +
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+GA KL M++ GC+PD + LC+ G+ + A + +A + P +L
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE-----LAMSFTPSVPVYNAL 252
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ G+ EA +L+ M +
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNK 275
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 4/188 (2%)
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
KS + + +++ E + + V +LQ M+ GI+ +++ I S + SE+
Sbjct: 70 KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A M +KP + Y H++ E + ++++M G EP+ + + +
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
LC+ + A K+ +KG P + +L++ L + KV EA EL F S
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL----AMSFTPS 245
Query: 391 GDMWNAAL 398
++NA +
Sbjct: 246 VPVYNALI 253
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 146/316 (46%), Gaps = 8/316 (2%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MID 128
SP D + +S ++ +A F +LL+E++ R + N V++ ++ G + +D
Sbjct: 164 SP-DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNA---VYNTIIKGLCDNGRVD 219
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ + +M + SV L+ S + I + + G PN TYN +
Sbjct: 220 SALVHYRDMQR-NCAPSVITYTILVDALCKSARISDASLILEDMIEA-GCAPNVVTYNTL 277
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I FC+ G+ + +M S P+ + +L+ G+ K+ + +D K+LQ M K G
Sbjct: 278 INGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 337
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
YN + SL K + +A L ML R KP+ T+ +I F K G L+ A +
Sbjct: 338 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 397
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF MT+ GC PD Y + + C+ + A ++ G P T S+V+GL
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457
Query: 369 SISKVAEANELIGLMK 384
S+V EA E+ +++
Sbjct: 458 KASQVDEAYEVYEVLR 473
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 2/237 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
+ L+ G ++++++ R+ E K GI P++ YN +IK C++G S +M+
Sbjct: 171 STLINGFCKARDFQQAYRLLDEMEK-RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 229
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R + P+ + +L+ K + D +L+ M + G A V YN I CKL +
Sbjct: 230 R-NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L + ML P++ TY LI G+ K+ + KL M GCEP+ +
Sbjct: 289 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L + G+Y A + + + + P T ++ + ++ A EL LM R
Sbjct: 349 DSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 405
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 1/287 (0%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
L ++ R D + + I ++ + +D A + F+ M G + N ++ G
Sbjct: 363 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 422
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ ++ +++ + G P+ TYN ++ C++ Y + +R +
Sbjct: 423 RANRIDDARQLLERMTEA-GCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
L+ G K + +D K+L+ ME+ G A V Y I I CK + +++ A
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
ML +G P + TY +I K + L +M G PD+ + LC+
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDS 601
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
Y+ A ++ + G P T LV L +S++ EA L+ +M+
Sbjct: 602 YDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVME 648
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 9/305 (2%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYG 141
K+ Q + + QL+ + PD+ + ++I++ G +AN ID A Q E M + G
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDI------YTYNIMISGACRANRIDDARQLLERMTEAG 441
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
V N+++ G + +E ++ E + G + T + +I C+S
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVY-EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA 500
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+L EM R P+ + +L+ GF K + + M G V Y+I I
Sbjct: 501 EKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 560
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCK R + LL ML RG+ P+ Y +I G K + + A +L+ M GC P
Sbjct: 561 LCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPT 620
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + LC+ + A+ + + G +P T S+ G ++ +A L
Sbjct: 621 VVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQ 680
Query: 382 LMKKR 386
MK R
Sbjct: 681 AMKSR 685
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 135/313 (43%), Gaps = 35/313 (11%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDL--------------RQNERFHVH 116
D ++I +S +AN + QLLE E PD+ + +E + V+
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469
Query: 117 SIVLYG-----------------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
++ G ++ +D A + EM++ G V A L+ G +
Sbjct: 470 EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKA 529
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
++ F+E G P TY+ VI C+S +L M + + P+A
Sbjct: 530 DQLDKSLAFFSEMLD-KGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIV 588
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ ++ G K Y++ ++ ++M++ G A V YN+ + LCK+ R +EA LL+ M
Sbjct: 589 YTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVME 648
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
S G P+ TY + GF K + A +LF +M + GC P + + + L + +
Sbjct: 649 SDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMD 708
Query: 340 TALKVCRASMAKG 352
A+++ ++ G
Sbjct: 709 QAMEIWEEALEAG 721
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 113/287 (39%), Gaps = 36/287 (12%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM KYG + N L+ + S Y + + + +P+ T+N +I FC
Sbjct: 329 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLR-RDCKPSHFTFNLMIDMFC 387
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y + M + P+ + ++++G + ++ +D ++L+ M + G V
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447
Query: 254 VYN-----------------------------------IRIQSLCKLKRSEEAKALLDGM 278
YN I LCK +R ++A+ LL M
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM 507
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
G P++ Y LIHGF K L+ + F+ M + GC P + + LC+
Sbjct: 508 ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 567
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ + + +G P S++ GL EA EL LMK+
Sbjct: 568 RDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 96/237 (40%), Gaps = 34/237 (14%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T N ++ +F + Y + R P++ + L+ GF K ++ ++L M
Sbjct: 134 TCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEM 193
Query: 244 EKCGIASGVNVYNIRIQ----------------------------------SLCKLKRSE 269
EK GI VYN I+ +LCK R
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARIS 253
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A +L+ M+ G PN+ TY LI+GF K GN++ A LF M C PD + + +
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ + K+ + + G P+F T +L+ L K +A L +M +R
Sbjct: 314 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 370
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 105/264 (39%), Gaps = 32/264 (12%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMI 127
LD + S + L ++ + +LL E++ + PD+ ++I+++G +A+ +
Sbjct: 479 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV------AYTILIHGFCKADQL 532
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLL----------GCILSKNYEEVKRIFTEFPKVYG 177
D ++ F EM G +V + ++ GC+L K E G
Sbjct: 533 DKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLE-----------RG 581
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P++ Y VI C+S Y + M++ P + +L+ K + ++
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L++ME G YN K ++A L M SRG P Y L+
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701
Query: 298 GKEGNLEGAKKLFASMTNGGCEPD 321
E ++ A +++ G + D
Sbjct: 702 VAEEKMDQAMEIWEEALEAGADVD 725
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 1/205 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + +EM + GL V A++ + R+ E K+ G +PN TYN ++
Sbjct: 166 AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL-ELMKLRGCKPNVWTYNALV 224
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ FC G ++L +MR + P+A + LL+ G + E ++L++ME G+
Sbjct: 225 QGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 284
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I +LCK R+++A +L D + +RGIKPN T+ LI+G K G ++ A K
Sbjct: 285 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKF 344
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQ 334
M + GC PD+Y + F LC+
Sbjct: 345 LEKMVSAGCTPDTYTYSSFIEHLCK 369
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM +M G+ N L+ G + + E R+ + G+ + TYN
Sbjct: 233 VHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLL-RLMEGDGLIADQYTYN 291
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + C+ G + S+ + + I+PNA F L+ G K K + K L+ M
Sbjct: 292 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSA 351
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y+ I+ LCK+K S+E + + ML + +KP+ Y +IH KE N
Sbjct: 352 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 411
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + M + GC PD + C G A V G +L+ G
Sbjct: 412 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 471
Query: 367 LASISKVAEANELIGLM 383
ASI + A ++ M
Sbjct: 472 HASIGQTDHAVSILKQM 488
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 115/288 (39%), Gaps = 32/288 (11%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ M + G R N+L++G + + + +F + P + G + +Y +I
Sbjct: 30 ALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP-LRGFAQDVVSYAALI 88
Query: 190 KSFCESGDSSSVYSILAEMRRKSI-------------------------------RPNAT 218
+ FCE+G + EM + + RP+
Sbjct: 89 EGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTR 148
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ ++ E K ++ ++LQ M + G+A V I + CK R +A +L+ M
Sbjct: 149 AYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELM 208
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
RG KPN+ TY L+ GF EG + A L M G PD+ + + C G
Sbjct: 209 KLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHI 268
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
E+A ++ R G + T +L+ L + +A L ++ R
Sbjct: 269 ESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 316
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 114/275 (41%), Gaps = 18/275 (6%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A F+ ++ G++ + N+L+ G S + + F E G P++ TY+
Sbjct: 304 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVD-IAWKFLEKMVSAGCTPDTYTYSS 362
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
I+ C+ S S + EM +K ++P+ ++ +++ KE Y V + M G
Sbjct: 363 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 422
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V Y +++ C R EA+ +L M G+ + Y L+ G G + A
Sbjct: 423 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 482
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG--------------- 352
+ MT+ P+ + +F+ L + E L + A + K
Sbjct: 483 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 542
Query: 353 --WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
++P+ T S++ G + + EA L+ LMK+
Sbjct: 543 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 577
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 5/212 (2%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN VI+S C D +S L+ M R RP+A F L+ G+ + ++ + + M
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G A V Y I+ C+ R +EA L M +P++ Y L+ G K G
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGLCKAGRG 128
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E + M G P + + F C + + A ++ + KG P T ++
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 364 VTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+ ++++A ++ LMK R K ++W
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKP-NVWT 219
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 114/264 (43%), Gaps = 25/264 (9%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++I + KL + ++ +++ E+ + PD+ + S+ Y ++ A
Sbjct: 395 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT----YTTSMRAYCIEGRLNEAENVL 450
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC- 193
EM K G+ A N L+ G + I + V + PN TY +++
Sbjct: 451 MEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV-PNQFTYFILLRHLVR 509
Query: 194 ----------------ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++ + + V+ + M++ PN+ + +L GF ++ + E+
Sbjct: 510 MRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEAT 569
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ +M++ I+ ++Y + CK KR +A L+ M+ G P+L +Y+HL+ G
Sbjct: 570 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGL 629
Query: 298 GKEGNLEGAKKLFASMTNGGCEPD 321
EG + AK++F + PD
Sbjct: 630 ICEGQTDKAKEIFMNSRWKDYSPD 653
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 97/245 (39%), Gaps = 20/245 (8%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+NY V R + E G P+ TY ++++C G + ++L EM + + +
Sbjct: 406 RNYGLVARTWGEMVSS-GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 464
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G + + +L+ M Y I ++ L +++ E+ L +
Sbjct: 465 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 524
Query: 280 SRGIK-----------------PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ I+ PN TY ++ GF ++G E A L + M +
Sbjct: 525 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE 584
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ C+ Y A + + + G++PH + + L++GL + +A E+
Sbjct: 585 DIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI--F 642
Query: 383 MKKRF 387
M R+
Sbjct: 643 MNSRW 647
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PNS TY+ +++ F E G + S+++ M+ SI N + L+ F K +Y D +
Sbjct: 547 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 606
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + G + Y + L ++++AK + + P+ +K +I G K
Sbjct: 607 VCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 666
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+G+ + ++++ + C P + M T
Sbjct: 667 KGHSDISREMIIMLERMNCRPSHQTYAMLT 696
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 20/272 (7%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+T+ EM G V + + E + + E K G+ ++ YN ++
Sbjct: 413 RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK-NGVTVDTMAYNTLMDG 471
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLL-----------------AGFYKEHKYE 234
G + SIL +M + PN + +LL AG +K +
Sbjct: 472 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 531
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
DV + +M+K Y+ ++ + R+EEA +L+ M I N D Y L+
Sbjct: 532 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 591
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-FMFTYFLCQGGEYETALKVCRASMAKGW 353
F K A L SM G P + + + +C+ G+ + A ++ S K +
Sbjct: 592 TCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICE-GQTDKAKEIFMNSRWKDY 650
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P K ++ GL + E+I ++++
Sbjct: 651 SPDEIVWKVIIDGLIKKGHSDISREMIIMLER 682
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 153/336 (45%), Gaps = 12/336 (3%)
Query: 60 DICCGASL--APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
D CGA AP + A AV +L+ A + + L+E++ R + E V +
Sbjct: 38 DPLCGAGPPPAPGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLR-GVPCTEGALVAA 96
Query: 118 IVLYGQANMIDHAMQTFEEM--DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
+ + +A D A++TF D R + L L+ +L +N + + +
Sbjct: 97 VGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRK 156
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+ PN TYN ++++ C++ + +L EM RK P+ + +++ K + ++
Sbjct: 157 DGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDE 216
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+VL M + YN + +LC+ R +E +++ M+ RG++PN+ TY ++
Sbjct: 217 ATEVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVD 271
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F K G L A + A M GC P+ F L G AL + R +A+GW P
Sbjct: 272 AFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAP 331
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR--FPK 389
+ L+ GL S+ + A+ ++ M++ FP
Sbjct: 332 STVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 367
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 7/299 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+++ V L Q N A ++L+E+ R ++ + + + + + +D A + M
Sbjct: 166 YNLLVRALCQNNRVGAARKMLDEM-ARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 224
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ NA++L +EV + ++ G++PN TY ++ +FC++G+
Sbjct: 225 PPVAA-----SYNAIVLALCREFRMQEVFSVVSDMVG-RGLQPNVITYTTIVDAFCKAGE 278
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ILA M PN F L+ G + + + D + + M G A YNI
Sbjct: 279 LRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNI 338
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I+ LC + + A ++L+ M G PN+ TY LI GF K G+L GA ++ M+ G
Sbjct: 339 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 398
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
C+P+ + C+ + A + + + P+ T +L+ L +V A
Sbjct: 399 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRA 457
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 2/292 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++++I + L S +L ++ N R + I + +A + A+ +
Sbjct: 334 VSYNILIRGLCSVGDLKGASSILNSMEQH-GCFPNVRTYSTLIDGFSKAGDLGGAISIWN 392
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M + G + +V ++ + + K + + + PN+ T+N +I+S C+
Sbjct: 393 DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM-LLENCPPNTVTFNTLIRSLCDC 451
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ EMRR PN + L+ G ++E D ++ M+ GI + Y
Sbjct: 452 RRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 511
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + LC+ + S EA + M+ +GI+PN T+ +IH + KEG + A + +M
Sbjct: 512 NTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 571
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
C + + + LC + A+ + +G P+ T LV G+
Sbjct: 572 VNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 5/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ + M G S + N L+ G + + I + +G PN TY+
Sbjct: 314 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ-HGCFPNVRTYS 372
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ--MME 244
+I F ++GD SI +M R +PN + ++ F K+ + ++ ++E
Sbjct: 373 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 432
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
C +N I+SLC +R A + M G PN TY LIHG +EGN
Sbjct: 433 NC--PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 490
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M + G E + LCQ A+ + +G P+ T +++
Sbjct: 491 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 550
Query: 365 TGLASISKVAEANELIGLMK 384
+V A ++G M
Sbjct: 551 HAYCKEGEVRMAAWMLGAMN 570
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 34/293 (11%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE--------- 171
Y +A D A+ TF M+KYG+ ++ A N+LL SKN + + IF +
Sbjct: 147 YARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNGRFNPDA 206
Query: 172 ---------------FPK---VY------GIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
PK VY G +P+ TY ++ S C++G ++ +
Sbjct: 207 KTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVVQD 266
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + +P + +L+ + E + ED MEK GI V VYN + + CK+K+
Sbjct: 267 MSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKK 326
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
E A ++D M GI PN T+ +++ G + A ++F M C+PDS + M
Sbjct: 327 FENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKR-CQPDSDTYTM 385
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ E ALKV + K ++P T L+ GL +V++A L+
Sbjct: 386 MIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLL 438
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 148 ALNALLLGCILSK-----NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+N G I+ K ++E F K YG+ PN +N ++ + C+S +
Sbjct: 134 VVNVETFGIIMRKYARAQKFDEAVYTFNIMEK-YGVVPNLAAFNSLLGALCKSKNVRKAQ 192
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
I +M + P+A + +LL G+ K + +V M G + Y I + SL
Sbjct: 193 EIFDKMNGR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSL 251
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CK R EEA ++ M SRG +P Y L+H +G E +E A F M G PD
Sbjct: 252 CKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDV 311
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ C+ ++E A +V G P+ T ++ L S+ K EA +
Sbjct: 312 VVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRR 371
Query: 383 MKKRFPKSGDMWNAAL 398
M KR D + +
Sbjct: 372 MIKRCQPDSDTYTMMI 387
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 7/230 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D + + I V L + +++++ +R Q F ++S+++ YG I+ A+
Sbjct: 240 DIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRG--CQPTTF-IYSVLVHTYGVEMRIEDAV 296
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
TF +M+K G+ V NAL+ K +E R+ + +GI PNS T+N ++
Sbjct: 297 ATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEG-HGIAPNSRTWNIILNK 355
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
G Y + M ++ +P++ + +++ F + E KV + M
Sbjct: 356 LISLGKDDEAYRVFRRMIKRC-QPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPS 414
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
++ +++ I LC +A LL+ M+ +GI+P T+ L KEG
Sbjct: 415 MHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG 464
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 123/263 (46%), Gaps = 5/263 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF---PKVYGI--EPN 181
I A + F M K G + L+ G + N ++ E YG+ +P
Sbjct: 177 ISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPG 236
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TY+ +I C+ G + EM+ + + P+ + L+ GF K++ +
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ + +++ I +LCK + EAK LL+ M+ RGI PNL TY LI GF G
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVG 356
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+L A++LF SM + G EPD + C+ + + A+ + + G P+ +T
Sbjct: 357 DLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYG 416
Query: 362 SLVTGLASISKVAEANELIGLMK 384
+L+ GL KV +A +L G+MK
Sbjct: 417 TLLKGLFQKGKVGDAKKLFGVMK 439
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 143/316 (45%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D +++S + A ++ L +E+ +PD+ F V L + + A
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVT---FSVLIDTLCKEGK-VTEA 326
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ E M + G+ ++ N+L+ G + + + +F P G+EP+ +Y +I
Sbjct: 327 KKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPS-KGLEPDEISYTTLIN 385
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C++ ++ EM + PN T +G LL G +++ K D K+ +M+ G+++
Sbjct: 386 GYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSA 445
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+Y I + LCK EA L + + S K N++ Y LI G K G LE A +LF
Sbjct: 446 NSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELF 505
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
++ G +PD + + + C+ G+ + A + G P +L+ G
Sbjct: 506 EKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEG 565
Query: 371 SKVAEANELIGLMKKR 386
+K+ E +L+ M ++
Sbjct: 566 NKLEEVIKLLHKMVQK 581
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI++ G + D A + FEEM G+ V + + L+ G + +++ K +F E
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G++P+ T++ +I + C+ G + +L M ++ I PN + L+ GF
Sbjct: 300 D-QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ M G+ Y I CK + +EA L + ML G PN+ TY L
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ G ++G + AKKLF M G +S + +F LC+ A+++ + +
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
+ L+ GL K+ A EL
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWEL 504
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 120/291 (41%), Gaps = 15/291 (5%)
Query: 108 RQNERFHVHSIVLY------GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
R+ FH H + L+ G I A F+ M + + + N LL G +
Sbjct: 49 REEISFH-HPLSLFLRNCKTGNITAI-QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINH 106
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
Y ++ ++ E ++ G+ P+ T + + C S + +A + R+ PN +
Sbjct: 107 YSQLFSLYNEM-RLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYT 165
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ G EH+ + ++ M+K G Y I+ LC+ A L ML+
Sbjct: 166 TLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLND 225
Query: 282 G------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
KP + TY +I G K G + AK+LF M G PD + + C
Sbjct: 226 ASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCA 285
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+++ + + + +G P T L+ L KV EA +L+ +M +R
Sbjct: 286 GKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR 336
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 124/286 (43%), Gaps = 36/286 (12%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+A+Q ++M++ G + V A N ++ + E F+E GI PN TY+ +
Sbjct: 194 NALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVD-QGIPPNVVTYSSI 252
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ FC G + S+ +M +++ PN F +L+ G KE + +V +MM + G+
Sbjct: 253 LHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGV 312
Query: 249 -----------------------------------ASGVNVYNIRIQSLCKLKRSEEAKA 273
A V VYNI I CK +R EAK
Sbjct: 313 EPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKT 372
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M R + P+ TY L+ GF + G + A+KLF M + G PDS + + LC
Sbjct: 373 LLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLC 432
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ G + A ++ +A PH L+ G+ + K+ A EL
Sbjct: 433 KHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAREL 478
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 147/327 (44%), Gaps = 16/327 (4%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL------ 120
+ P P+ + F+ + L + H++ + L +++ DL N R +V+++ +
Sbjct: 63 IRPLPPV--VVFNKLLGSLVKKKHYSTVISLCKQM----DL-SNIRPNVYTLTILINCLC 115
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIE 179
+ + + A +M K GL+ + LL G C +K + VK +F E K+ G
Sbjct: 116 HSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVK-LFDEIGKM-GFA 173
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TY +IK C+ G +++ +L +M K +P+ + ++ K+ + +
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M GI V Y+ + C L + EA +L M+ R + PN T+ L+ G K
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG + A+++F MT G EPD+Y + C + + A K+ + KG+ P
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
L+ G ++ EA L+ M R
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDR 380
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 1/244 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A + F+ M G SV N L+ G S+ E K + +E + P
Sbjct: 326 YCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYD-RDLTP 384
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TY+ +++ FC++G + EM + P++ + +LL G K ++ ++L
Sbjct: 385 DTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLL 444
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ I + +YNI IQ +C + E A+ L + +GI+P++ TY +I G KE
Sbjct: 445 KAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKE 504
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A ++F M GC P+S + + + G+ A+++ + +G+ ST
Sbjct: 505 GLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTF 564
Query: 361 KSLV 364
+ L+
Sbjct: 565 QMLL 568
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 138/317 (43%), Gaps = 6/317 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDH 129
P + + +S + N + L +++ R + F +I++ G + MI
Sbjct: 243 PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTF---TILVDGLCKEGMILE 299
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + FE M + G+ +AL+ G L +E +++F + G P+ YN +I
Sbjct: 300 ARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF-DIMVGKGFAPSVRVYNILI 358
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+S + ++L+EM + + P+ + L+ GF + + + K+ + M G+
Sbjct: 359 NGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y+I + LCK +EA LL M I+P++ Y LI G G LE A++L
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAREL 478
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F+++ G +P + + L + G A ++ R + G +P+ T + G
Sbjct: 479 FSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLR 538
Query: 370 ISKVAEANELIGLMKKR 386
+ A LI M R
Sbjct: 539 NGDPSNAVRLIEEMVGR 555
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 115/310 (37%), Gaps = 75/310 (24%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSET--YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA- 217
N V F ++ GI P +NK++ S + S+V S+ +M +IRPN
Sbjct: 46 NLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVY 105
Query: 218 ------------------------------------TDFGLLLAGFYKEHK-------YE 234
FG LL G + K ++
Sbjct: 106 TLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFD 165
Query: 235 DVGK----------------------------VLQMMEKCGIASGVNVYNIRIQSLCKLK 266
++GK +L+ ME+ G V YN I SLCK +
Sbjct: 166 EIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDR 225
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R+ EA M+ +GI PN+ TY ++HGF G L A LF M P++ F
Sbjct: 226 RANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFT 285
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM-KK 385
+ LC+ G A +V G P T +L+ G S++ EA +L +M K
Sbjct: 286 ILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK 345
Query: 386 RFPKSGDMWN 395
F S ++N
Sbjct: 346 GFAPSVRVYN 355
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 158/354 (44%), Gaps = 40/354 (11%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+++ + ++KL ++ F+ + Q+L +L+ E + I YG+A + D A+QTFE
Sbjct: 44 LSYDLIITKLGRSRMFHEMEQILSQLRRETRFSPKEIIFCNVISFYGRARLPDRAIQTFE 103
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+ ++ +++V +LN+LL + K +E+ I + K PN TYN +I + C S
Sbjct: 104 SIPEFRCQRTVKSLNSLLNALLNCKEFEKFDGILSGIDKF--ATPNVCTYNILINACCLS 161
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY-------EDVGKVLQMMEKCGI 248
G +++ EM RK + PN FG L++G ++ + ED+ KV + +
Sbjct: 162 GRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFV 221
Query: 249 ASGV-----------------------------NVYNIRIQSLCKLKRSEEAKALLDGML 279
+ + +Y+ I +L K+ R +E +L+ M
Sbjct: 222 YASLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMR 281
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
G KP+ TY +I GF E + E A + M GC+PD + + LC+ G++
Sbjct: 282 ENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWR 341
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM--KKRFPKSG 391
A + +G P + + L GL + EA ++ M K PKS
Sbjct: 342 EANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSA 395
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 111/243 (45%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A F+EM + + +V L+ G +E R+ + KV+ ++PN+ Y
Sbjct: 164 LGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLKEDMVKVFNVKPNAFVYA 223
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++K C + S + + EM +R ++ + L+A +K + ++V VL+ M +
Sbjct: 224 SLMKGLCRVNELSLAFELKKEMVANKLRLDSGIYSTLIAALFKVGRKDEVFVVLEEMREN 283
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G YN I C K E A +L+ M+ +G KP++ +Y +I G KEG A
Sbjct: 284 GCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREA 343
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M GC PD + + LC+G ++ A + + KG+ P ++ V
Sbjct: 344 NDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEAAFILDEMVFKGYAPKSASXTKFVEA 403
Query: 367 LAS 369
L S
Sbjct: 404 LCS 406
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 134/287 (46%), Gaps = 6/287 (2%)
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
F V S+ +A M+ A++ FE M S+ N L+ + + + +F
Sbjct: 15 FVVQSL---AKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ +EP+ TYN +I C SG++ +L+EMR K+I N + ++ KE K
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E+ KVL+ M G V +N +Q + E+A+ + M+ G KP+ +Y
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 293 LIHGFGKEGNLEGAKKLFA--SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LIHG K G L+ + K+ + +M G P+ F + LC+ GE E AL+V + +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNA 396
G P+ T +L+ GL KV +A EL M + P +N+
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 298
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 22/354 (6%)
Query: 44 ATIARLKSESNP---FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNA---ISQL 97
+ I L E+ P +++L+ A P D AF+ + +++N+ + Q
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNP----DVFAFNGVMQGFARSNNMEKAREVYQH 176
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEM--DKYGLRQSVDALNALL 153
+ E +PD N +H I+++G A + +D +++ EM G +V + L+
Sbjct: 177 MVESGYKPD---NVSYH---ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLI 230
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G + E+ +F + G +PN TY +I C + + +M + I
Sbjct: 231 HGLCRTGELEKALEVFGSMLEA-GCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACI 289
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGIASGVNVYNIRIQSLCKLKRSEEAK 272
P+A + L+AG+ K ++ K+ + M G+ + +N I CKL + A
Sbjct: 290 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 349
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L+ M ++G+ + TY+ LI G + L+ A +++ M D F L
Sbjct: 350 ELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 409
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G + A V A+ G VP+ T + L L + +V +A +L+ K R
Sbjct: 410 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 7/208 (3%)
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+ Y+ V++S ++G + + M+ +S P+ + +L+ ++ GK L +
Sbjct: 11 DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEF---GKALDL 67
Query: 243 MEKCGIASGVN----VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ V YN I LC +E A+ LL M + I N+ TY +I
Sbjct: 68 FQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLV 127
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KE E + K+ M GC PD + F + E A +V + + G+ P
Sbjct: 128 KEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNV 187
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
+ L+ GLA I K+ E+ +++ M R
Sbjct: 188 SYHILIHGLAKIGKLDESLKILSEMAMR 215
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 35/196 (17%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A + A + FE+M + + A N+L+ G + +E ++++ E G++P
Sbjct: 270 RAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTI 329
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N +I FC+ G ++AEM K + + + +L+AG + K ++ +V +
Sbjct: 330 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQ 389
Query: 243 ME-----------------------------------KCGIASGVNVYNIRIQSLCKLKR 267
M K G + I +SL KL R
Sbjct: 390 MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGR 449
Query: 268 SEEAKALLDGMLSRGI 283
E+A+ L++ +R I
Sbjct: 450 VEDAQKLMEPAKARDI 465
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M K A G + Y+ +QSL K +A + + M S P+L TY LI+ G
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 303 LEGAKKLFASMTNGG-CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
A LF SM EPD + + LC G E A K+ K + T
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120
Query: 362 SLVTGLASISKVAEANELI 380
S++ L +K E+ +++
Sbjct: 121 SIIKSLVKEAKPEESYKVL 139
>gi|356555104|ref|XP_003545878.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Glycine max]
Length = 395
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 9/298 (3%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA-NMI 127
P PL + +SKL+QA+ N I L + L R R ++ F I Y + +
Sbjct: 82 PSEPL----CTTLISKLAQAHQLNPILTLHQTLTKR--RRFSDDFFYTLIKAYAHSFQRV 135
Query: 128 DHAMQTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
D A+QT +M+ + S N +L + ++ Y + +F P + G+ P++ T N
Sbjct: 136 DMALQTLHDMNSLFHCSPSTRTFNFVLNVLVNTRLYAAARELFLHAPPL-GVSPDACTLN 194
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VIK C G+ + + +L E NA + L+ G ++ + E+ +L+ ME+
Sbjct: 195 IVIKGLCARGEMDAAFGVLEEFHELGCEANARTYATLMKGLCEKGRVEEAFGLLEKMEEE 254
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + V VYN+ I L K+ R +E +L+GM+ RG+ PN TY ++ G ++G +E
Sbjct: 255 GVETDVAVYNVLIGGLRKVGRVDEGWRVLEGMVGRGVCPNEGTYNEVLCGLVEKGRVEEG 314
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
K + M N G P + C+ G V KG+VP + +V
Sbjct: 315 KGVVERMGNKGFVPSFGAYKDLVKGFCEKGLVGEVEWVVWDMAWKGFVPKMGMWRRIV 372
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 8/212 (3%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMID 128
SP D +I + L +A +LEE +L ++ ++ G + ++
Sbjct: 187 SP-DACTLNIVIKGLCARGEMDAAFGVLEEFH---ELGCEANARTYATLMKGLCEKGRVE 242
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A E+M++ G+ V N L+ G +E R+ E G+ PN TYN+V
Sbjct: 243 EAFGLLEKMEEEGVETDVAVYNVLIGGLRKVGRVDEGWRVL-EGMVGRGVCPNEGTYNEV 301
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ E G ++ M K P+ + L+ GF ++ +V V+ M G
Sbjct: 302 LCGLVEKGRVEEGKGVVERMGNKGFVPSFGAYKDLVKGFCEKGLVGEVEWVVWDMAWKGF 361
Query: 249 ASGVNVYNIRIQSLCKLKRSE-EAKALLDGML 279
+ ++ ++ + +RS+ +DG+L
Sbjct: 362 VPKMGMWRRIVKCVVDRERSDGWVVGAIDGVL 393
>gi|449456671|ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
mitochondrial-like [Cucumis sativus]
Length = 411
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 8/296 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+++ VS+L++ F+ I +++ +K + R ++ F H I +YG A ++ A+ T +
Sbjct: 94 YTLVVSRLAEGRLFDDIEKVMLRIKAERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFD 153
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M Y SV N +L + +K ++ V ++ PK+ GIE ++ N ++K C+SG
Sbjct: 154 MPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKL-GIEIDACCLNILVKGLCQSG 212
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM---MEKCGIASGVN 253
+ + +L E ++ RPN F LL G + ++G+ L++ ME G+
Sbjct: 213 NLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENG---ELGRALELFCKMENEGVCPDTI 269
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+NI I L K KR EEA LL M +G PN TY+ +++G G A+ M
Sbjct: 270 TFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAGTYQEVLYGLLDTGKFIEARDCMHRM 329
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ G +P + LC+ E V + + +G+VP K ++ + S
Sbjct: 330 ISEGMDPSFVSYKKLLSGLCKKKLTEDVDWVLKQMVMQGFVPKVGMWKVILRCMLS 385
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 123/310 (39%), Gaps = 34/310 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + ++ + Q H +++ L + R D + N+ + + + +
Sbjct: 54 DWLSPNEVINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRL------- 106
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F++++K LR + +N+ F K+YG + NK I +
Sbjct: 107 FDDIEKVMLRIKAE------------RNFRLSDEFFYHVIKIYG--NVAGRLNKAIDT-- 150
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
L +M + P+ F +L ++ V +V K GI
Sbjct: 151 -----------LFDMPNYNCWPSVKTFNFVLNLLVSAKMFDVVHEVYMGAPKLGIEIDAC 199
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
NI ++ LC+ + A +LD + +PN+ T+ L+HG + G L A +LF M
Sbjct: 200 CLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFSTLLHGLCENGELGRALELFCKM 259
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
N G PD+ F + L + E A+++ KG P+ T + ++ GL K
Sbjct: 260 ENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKGCYPNAGTYQEVLYGLLDTGKF 319
Query: 374 AEANELIGLM 383
EA + + M
Sbjct: 320 IEARDCMHRM 329
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 97/246 (39%), Gaps = 40/246 (16%)
Query: 186 NKVIKSFCESGDSSSVYSILAEM-RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL---- 240
N+VI + SSV + L + RK +PN + L+++ + ++D+ KV+
Sbjct: 59 NEVINIIQQIQHPSSVLAFLHQWSNRKDYKPNKEIYTLVVSRLAEGRLFDDIEKVMLRIK 118
Query: 241 -------------QMMEKCGIASG--------------------VNVYNIRIQSLCKLKR 267
+++ G +G V +N + L K
Sbjct: 119 AERNFRLSDEFFYHVIKIYGNVAGRLNKAIDTLFDMPNYNCWPSVKTFNFVLNLLVSAKM 178
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+ + G GI+ + L+ G + GNL+ A K+ C P+ F
Sbjct: 179 FDVVHEVYMGAPKLGIEIDACCLNILVKGLCQSGNLDAALKVLDEFPQQRCRPNVRTFST 238
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
+ LC+ GE AL++ +G P T L++GL ++ EA EL+G MK +
Sbjct: 239 LLHGLCENGELGRALELFCKMENEGVCPDTITFNILISGLRKKKRIEEAIELLGRMKLKG 298
Query: 387 -FPKSG 391
+P +G
Sbjct: 299 CYPNAG 304
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 128/260 (49%), Gaps = 6/260 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK---RIFTEFPKVYGIE 179
+A M+D A + F++M YGL SVD+ N + LS++ + +K ++F EFP+V G+
Sbjct: 194 EAGMLDEARKLFDKMLNYGLLISVDSCNLFISH--LSEDLDGIKIALKVFVEFPEV-GVC 250
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
N+ +YN + S C+ G + +L +M + P+ + ++ G+ + + + V K+
Sbjct: 251 WNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKL 310
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++ M+ G+ YN I LCK + EA+ +L M+S GI P+ Y LI GF K
Sbjct: 311 IEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCK 370
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
GN+ A +LF M PD + LCQ G A K+ + K P T
Sbjct: 371 LGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVT 430
Query: 360 MKSLVTGLASISKVAEANEL 379
+L+ G K+ EA L
Sbjct: 431 YTALIDGYCKEGKMKEAFSL 450
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 6/324 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++S ++ Q + +L+EE++ + L+ N + I+L + + A +
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIK-GLKPNPYTYNGVILLLCKTGKVAEAERV 345
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM G+ L+ G N R+F E K I P+ TY VI C
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK-RKISPDFITYTAVICGLC 404
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G + EM K + P+ + L+ G+ KE K ++ + M + G+ +
Sbjct: 405 QTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIV 464
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y LCK + A LL M +G++ N+ TY L++G K GN++ A KL M
Sbjct: 465 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 524
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD+ + C+ E A ++ R + + P T L+ G +
Sbjct: 525 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 584
Query: 374 AEANELIGLMKKRFPKSGDMWNAA 397
+ +L+ M ++ G M NA
Sbjct: 585 EDGEKLLKWMLEK----GIMPNAT 604
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 4/269 (1%)
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
HS+ G+ + A Q +M+ G V + + ++ G + V ++ E ++
Sbjct: 261 HSLCQLGR---VVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM-QI 316
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G++PN TYN VI C++G + +L EM + I P+ + L+ GF K
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 376
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ M+K I+ Y I LC+ R EA L M+ + ++P+ TY LI
Sbjct: 377 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+ KEG ++ A L M G P+ + LC+ GE +TA ++ KG
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMK 384
+ T SLV GL + +A +L+ M+
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDME 525
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 6/339 (1%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
+L + S+ +R+ D ++P D + ++ + L Q +L E+ +
Sbjct: 369 CKLGNVSSAYRLFDEMQKRKISP----DFITYTAVICGLCQTGRVMEADKLFHEMVCKR- 423
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
L +E + I Y + + A +M + GL ++ AL G +
Sbjct: 424 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 483
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+ E + G+E N TYN ++ C++G+ ++ +M P+A + L+
Sbjct: 484 ELLHEMCR-KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 542
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ K + ++L+ M + V +N+ + C E+ + LL ML +GI PN
Sbjct: 543 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
TY LI + N+ +++ M G PD + + C+ + A + R
Sbjct: 603 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 662
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ KG+ S+ +L+ G K EA EL M++
Sbjct: 663 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 701
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 16/325 (4%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERF 113
R+L +AP D + ++ + + + ++ +L +E++ R PD F
Sbjct: 344 RVLREMISEGIAP----DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD------F 393
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
++ V+ G Q + A + F EM L AL+ G +E + +
Sbjct: 394 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 453
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
++ G+ PN TY + C+ G+ + +L EM RK + N + L+ G K
Sbjct: 454 MLQM-GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 512
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ K+++ ME G Y + + CK + A LL ML R ++P + T+
Sbjct: 513 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 572
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L++GF G LE +KL M G P++ + C ++ R AK
Sbjct: 573 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 632
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G VP +T L+ G + EA
Sbjct: 633 GVVPDGNTYNILIKGHCKARNMKEA 657
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 6/286 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
+ ++ L + + ++LL E+ R L N + ++ ++ G +A ID A++
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEM-CRKGLELN--IYTYNSLVNGLCKAGNIDQAVKL 520
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M+ G L+ S+ + + ++P T+N ++ FC
Sbjct: 521 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD-RELQPTVVTFNVLMNGFC 579
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
SG +L M K I PNAT + L+ + + ++ + M G+ N
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 639
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI I+ CK + +EA L M+ +G + +Y LI GF K A++LF M
Sbjct: 640 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 699
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G D + +F G+ E L++C ++ K V T
Sbjct: 700 RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745
>gi|255576901|ref|XP_002529336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531207|gb|EEF33053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 610
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 3/312 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + + ++KL +A F+ + Q+L + KT+ L E + I YG+A + +A++ F+
Sbjct: 48 LCYDLMITKLGRAKMFHEMEQILLQFKTQTRLVAKEPLFCNIITFYGRAGLPQNALKMFD 107
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM Y ++++ + N LL ++ K ++ ++ F + ++P+ T+N +I+ C
Sbjct: 108 EMPLYRCQRTIKSYNTLLNVLMICKEFDVMREHFVNIKR--HVKPDGCTFNIMIRGLCSD 165
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNV 254
G +L EM+ + + PN FG L+ G K ++ K+ M G+ V
Sbjct: 166 GRVDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYV 225
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I+ LC + A L + M G+K + Y LI G K G + + M
Sbjct: 226 YATLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEME 285
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC+ D+ + + C+ ++ETA K+ M P + ++ L K +
Sbjct: 286 LKGCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWS 345
Query: 375 EANELIGLMKKR 386
EA++L M +R
Sbjct: 346 EASDLFEDMPRR 357
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A++ +EM L + L+ G L+ +E ++ V+G+ PN Y
Sbjct: 168 VDDALKVLDEMKNRDLVPNQVTFGTLIYGLCLNLKLKEAFKLKDYMVNVHGLCPNEYVYA 227
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+IK C G+ S + EM R ++ ++ + L++G +K + ++V VL ME
Sbjct: 228 TLIKGLCAVGELSFALRLKEEMERDGVKVDSAIYSTLISGLFKVGRKDEVFGVLMEMELK 287
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN+ I CK K E A +LD M+ KP++ +Y ++ K+G A
Sbjct: 288 GCKADTVTYNVMINGFCKDKDFETAYKILDEMMENRCKPDVISYNVILGELCKDGKWSEA 347
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M GC PD + + L E++ A + + KG+ P S++ +
Sbjct: 348 SDLFEDMPRRGCAPDVVSYRIVFDGLSDAMEFKDAAFILDEMVFKGFAPRSSSICKFINR 407
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
L ++ + K ++W A+
Sbjct: 408 LCQNGDEDLVWSVLNCLGKINAIDTELWKMAI 439
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 149/319 (46%), Gaps = 5/319 (1%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKY 140
+ LS ++ F+ + + E K + L F +S++ +G M++ + + M +
Sbjct: 162 IDVLSLSSDFDRVRCIFGEFKEKGFLMT--VFAANSLIRSFGALGMVEELLWVWRRMKES 219
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G+ S+ N LL G + S E +R+F E + I P+ +YN +IK +C++G++
Sbjct: 220 GIEPSLYTFNFLLNGLVNSMFIESAERVF-EVMECGKIGPDVVSYNTMIKGYCKAGNTKK 278
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+M ++++ P+ + L+ Y E ++ + Q ME+ G+ + Y++ I
Sbjct: 279 AMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIG 338
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK R+ E ++ + M +G K N+ Y LI +GK GN+ A LF M G EP
Sbjct: 339 GLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEP 398
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D + + LC+ G + A++ + SL+ GL +V EA +
Sbjct: 399 DDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFF 458
Query: 381 GLMKKR-FPKSGDMWNAAL 398
M +R P+ +NA +
Sbjct: 459 EEMVERGCPQDSYCYNALI 477
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 1/263 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A AM+ F +M+K L L+ C N++ ++ E + G+E
Sbjct: 270 YCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEE-RGLEI 328
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
Y+ VI C+ G + S+ M +K + N + L+ + K + +
Sbjct: 329 PPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLF 388
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ G Y + + LCK R +EA + + N Y LI G GK
Sbjct: 389 ERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKA 448
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G ++ A+K F M GC DSYC+ L + G+ E AL + + +G T
Sbjct: 449 GRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTY 508
Query: 361 KSLVTGLASISKVAEANELIGLM 383
L++GL + EA +L LM
Sbjct: 509 TILISGLFKEHRNEEALKLWDLM 531
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 2/260 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + N D + ++EM++ GL A + ++ G E +F K G +
Sbjct: 306 YSEGNF-DSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNK-KGCKA 363
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N Y +I ++ ++G+ + ++ M+ + P+ +G+++ G K + ++ +
Sbjct: 364 NVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYF 423
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ + +A Y+ I L K R +EA+ + M+ RG + Y LI K
Sbjct: 424 EFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKS 483
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G +E A LF M GC+ Y + + L + E ALK+ + KG P ++
Sbjct: 484 GKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASF 543
Query: 361 KSLVTGLASISKVAEANELI 380
++L GL KVA A +++
Sbjct: 544 RALSVGLCLSGKVARACKIL 563
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 125/312 (40%), Gaps = 15/312 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR----PDLRQNERFHVHSIVLYG--QANMI 127
D++ + + +F++ L +E++ R P H +S+V+ G +
Sbjct: 294 DKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPP-------HAYSLVIGGLCKDGRT 346
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
FE M+K G + +V AL+ + N E +F E K G EP+ TY
Sbjct: 347 VEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLF-ERMKGEGFEPDDVTYGV 405
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+SG + + NA + L+ G K + ++ K + M + G
Sbjct: 406 IVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERG 465
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
YN I +L K + EEA L M G + TY LI G KE E A
Sbjct: 466 CPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEAL 525
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KL+ M + G P + F + LC G+ A K+ G +P + + ++ L
Sbjct: 526 KLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPE-TAFEDMINVL 584
Query: 368 ASISKVAEANEL 379
+ +A +L
Sbjct: 585 CKAGRTEQACKL 596
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 95/239 (39%), Gaps = 3/239 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + + + V+ L ++ + + E K ++ N F+ I G+A +D A +
Sbjct: 399 DDVTYGVIVNGLCKSGRLDEAVEYFEFCKDN-EVAVNAMFYSSLIDGLGKAGRVDEAEKF 457
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEEM + G Q NAL+ S EE +F K G + TY +I
Sbjct: 458 FEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEK-EGCDQTVYTYTILISGLF 516
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + + M K I P F L G K K+L + G+
Sbjct: 517 KEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPET- 575
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ I LCK R+E+A L DG++ RG + LI+ K GN + A KL S
Sbjct: 576 AFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHS 634
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 81/206 (39%), Gaps = 4/206 (1%)
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
E Y +I S D V I E + K L+ F E++ V +
Sbjct: 156 ECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRR 215
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M++ GI + +N + L E A+ + + M I P++ +Y +I G+ K GN
Sbjct: 216 MKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGN 275
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW--VPHFSTM 360
+ A + F M EPD + G +++ L + + +G PH ++
Sbjct: 276 TKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSL 335
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
++ GL + E + + M K+
Sbjct: 336 --VIGGLCKDGRTVEGSSVFENMNKK 359
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 1/206 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + +EM + GL V A++ + R+ E K+ G +PN TYN +
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL-ELMKLRGCKPNVWTYNAL 187
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
++ FC G ++L +MR + P+A + LL+ G + E ++L++ME G+
Sbjct: 188 VQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGL 247
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I +LCK R+++A +L D + +RGIKPN T+ LI+G K G + A K
Sbjct: 248 IADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWK 307
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQ 334
M + GC PD+Y + F LC+
Sbjct: 308 FLEKMVSAGCTPDTYTYSSFIEHLCK 333
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM +M G+ N L+ G + + E R+ + G+ + TYN
Sbjct: 197 VHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLL-RLMEGDGLIADQYTYN 255
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + C+ G + S+ + + I+PNA F L+ G K K + K L+ M
Sbjct: 256 ALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSA 315
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y+ I+ LCK+K S+E + + ML + +KP+ Y +IH KE N
Sbjct: 316 GCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLV 375
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + M + GC PD + C G A V G +L+ G
Sbjct: 376 ARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDG 435
Query: 367 LASISKVAEANELIGLM 383
ASI + A ++ M
Sbjct: 436 HASIGQTDHAVSILKQM 452
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 114/275 (41%), Gaps = 18/275 (6%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A F+ ++ G++ + N+L+ G + ++ F E G P++ TY+
Sbjct: 268 DQACSLFDSLETRGIKPNAVTFNSLING-LCKSGKADIAWKFLEKMVSAGCTPDTYTYSS 326
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
I+ C+ S S + EM +K ++P+ ++ +++ KE Y V + M G
Sbjct: 327 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 386
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V Y +++ C R EA+ +L M G+ + Y L+ G G + A
Sbjct: 387 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 446
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG--------------- 352
+ MT+ P+ + +F+ L + E L + A + K
Sbjct: 447 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 506
Query: 353 --WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
++P+ T S++ G + + EA L+ LMK+
Sbjct: 507 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 541
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 113/264 (42%), Gaps = 25/264 (9%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++I + KL + ++ +++ E+ + PD+ + S+ Y ++ A
Sbjct: 359 YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVT----YTTSMRAYCIEGRLNEAENVL 414
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC- 193
EM K G+ A N L+ G + I + V + PN TY +++
Sbjct: 415 MEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV-PNQFTYFILLRHLVR 473
Query: 194 ----------------ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++ + + V+ + M++ PN+ + +L GF ++ + E+
Sbjct: 474 MRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEAT 533
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ +M++ I+ ++Y + CK KR +A L+ M+ G P L +Y+HL+ G
Sbjct: 534 SLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGL 593
Query: 298 GKEGNLEGAKKLFASMTNGGCEPD 321
EG + AK++F + PD
Sbjct: 594 ICEGQTDKAKEIFMNSRWKDYSPD 617
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 90/211 (42%), Gaps = 10/211 (4%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ T+N +I +C + + +M + + + L+ G + + ++
Sbjct: 5 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M++ +++Y ++ LC +R EE +L M G +P+ Y ++
Sbjct: 65 VELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL---CQGGEYETALKVCRASMAKGW 353
+E + A+++ M G P C T + C+ G AL+V +G
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAP---CVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 177
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMK 384
P+ T +LV G + KV +A L+ M+
Sbjct: 178 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 208
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 96/245 (39%), Gaps = 20/245 (8%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+NY V R + E G P+ TY ++++C G + ++L EM + + +
Sbjct: 370 RNYGLVARTWGEMVS-SGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 428
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G + + +L+ M Y I ++ L +++ E+ L +
Sbjct: 429 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 488
Query: 280 SRGIK-----------------PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ I+ PN TY ++ GF ++G E A L + M +
Sbjct: 489 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE 548
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ C+ Y A + + + G++P + + L++GL + +A E+
Sbjct: 549 DIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI--F 606
Query: 383 MKKRF 387
M R+
Sbjct: 607 MNSRW 611
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 69/150 (46%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PNS TY+ +++ F E G + S+++ M+ SI N + L+ F K +Y D +
Sbjct: 511 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 570
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + G + Y + L ++++AK + + P+ +K +I G K
Sbjct: 571 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 630
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+G+ + ++++ + C P + M T
Sbjct: 631 KGHSDISREMIIMLERMNCRPSHQTYAMLT 660
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 5/188 (2%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M R RP+A F L+ G+ + ++ + + M G A V Y I+ LC+ R
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA L M +P++ Y L+ G E + M G P + +
Sbjct: 61 IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
F C+ + + A ++ + KG P T +++ ++++A ++ LMK R
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176
Query: 388 PKSGDMWN 395
K ++W
Sbjct: 177 CKP-NVWT 183
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 105/272 (38%), Gaps = 20/272 (7%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+T+ EM G V + + E + + E K G+ ++ YN ++
Sbjct: 377 RTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSK-NGVTVDTMAYNTLMDG 435
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLL-----------------AGFYKEHKYE 234
G + SIL +M + PN + +LL AG +K +
Sbjct: 436 HASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELT 495
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
DV + +M+K Y+ ++ + R+EEA +L+ M I N D Y L+
Sbjct: 496 DVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALV 555
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-FMFTYFLCQGGEYETALKVCRASMAKGW 353
F K A L SM G P + + + +C+ G+ + A ++ S K +
Sbjct: 556 TCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICE-GQTDKAKEIFMNSRWKDY 614
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P K ++ GL + E+I ++++
Sbjct: 615 SPDEIVWKVIIDGLIKKGHSDISREMIIMLER 646
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 158/358 (44%), Gaps = 42/358 (11%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QA 124
++ P D + ++ ++ LS+++ + +LLEE+ D ++ VL+G +A
Sbjct: 36 MSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEM---VDNGFAPNVFSYNTVLHGFCKA 92
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +++A+ E+M G V + ++ G +E R+ + + G +PN T
Sbjct: 93 NRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ-RGCQPNVIT 151
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y ++ FC GD ++ +M + RPNA + ++ G K + ++ + ME
Sbjct: 152 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211
Query: 245 KCG-IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G V Y+ + SL K + ++A L++ M+S+G PN+ TY L+HG K G L
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKL 271
Query: 304 EGAKKLFASMTNGGCEP---------DSYC-----------------------FFMFTYF 331
+ A L MT GC P D +C +T
Sbjct: 272 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 331
Query: 332 L---CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L C+ G+ E A+ + + KG+VP+ T SL+ +V A +L+ M ++
Sbjct: 332 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 389
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 143/312 (45%), Gaps = 1/312 (0%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D ++++ ++ L + + + ++++++ R + N + + + + +D A+
Sbjct: 111 PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR-GCQPNVITYGTLVDGFCRVGDLDGAV 169
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +M + G R + N ++ G + + ++F E + P+ TY+ ++ S
Sbjct: 170 ELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDS 229
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+SG ++ M K PN + LL G K K ++ +LQ M + G +
Sbjct: 230 LVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 289
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I CKL R +EA LL+ M+ G +PN+ TY L+ F K G E A L
Sbjct: 290 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M G P+ + + C+ E E A ++ + + KG VP+ + +++ GL +
Sbjct: 350 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 409
Query: 372 KVAEANELIGLM 383
KV E L+ M
Sbjct: 410 KVHEGVLLLEQM 421
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 42/291 (14%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M++ GL+ ++L G + + F E K P+S TYN +I +S
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT--CPPDSVTYNTMINGLSKSD 58
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+L EM PN + +L GF K ++ E+ +L+ M G V Y
Sbjct: 59 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT-- 314
I LCKL + +EA ++D M+ RG +PN+ TY L+ GF + G+L+GA +L MT
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178
Query: 315 ----------------------------------NGGCEPDSYCFFMFTYFLCQGGEYET 340
+G C PD + + L + G+ +
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
A ++ A ++KG P+ T SL+ GL K+ EA L+ +R +SG
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL----QRMTRSG 285
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 4/279 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
V S+V G+ +D A + E M G +V ++LL G + +E + +
Sbjct: 227 VDSLVKSGK---VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 283
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G PN TYN +I C+ G Y +L EM +PN + +LL F K K E
Sbjct: 284 -SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 342
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
D ++++M + G + YN + CK E A LL M+ +G PN+ +Y +I
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G K + L M + C PD F +C+ + A ++ G
Sbjct: 403 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 462
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
P+ T SLV GL + +A L+ M ++ S D+
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 2/260 (0%)
Query: 127 IDHAMQTFEEMDKYG-LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D A+Q F+EM++ G V + ++ + S ++ R+ E G PN TY
Sbjct: 200 LDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRL-VEAMVSKGCSPNVVTY 258
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ ++ C++G ++L M R PN + ++ G K + ++ +L+ M
Sbjct: 259 SSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 318
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y + + + CK ++E+A L++ M+ +G PNL TY L+ F K+ +E
Sbjct: 319 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 378
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +L +SM GC P+ + LC+ + + + ++ VP T +++
Sbjct: 379 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 438
Query: 366 GLASISKVAEANELIGLMKK 385
+ +V A EL L+++
Sbjct: 439 AMCKTYRVDIAYELFNLIQE 458
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 1/210 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYED 235
G PN TYN ++ C+S +L EM RK P+ + ++ G K + +
Sbjct: 460 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 519
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
K+ M G+A Y+I I SLCK + +EA +L+ ML G P TY LI
Sbjct: 520 AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 579
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GF K GNL+ A ++ + + G PD F +F +L + G A ++ + G VP
Sbjct: 580 GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 639
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ G S+ +A +L +M++
Sbjct: 640 DTVTYNTLLKGFCDASRTEDAVDLFEVMRQ 669
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 104/243 (42%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F + + G ++ N+L+ G S+ +++ + + E + G P+ TYN
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 505
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+S Y + +M + P+ + ++++ K ++ VL++M K
Sbjct: 506 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 565
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G G Y I CK ++A +L +LS+G P++ T+ I K G L A
Sbjct: 566 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 625
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L +M G PD+ + C E A+ + G P +T +LV
Sbjct: 626 GELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGH 685
Query: 367 LAS 369
L
Sbjct: 686 LVD 688
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 107/256 (41%), Gaps = 6/256 (2%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD-KYGLRQSVDALNALLL 154
L++E P+L VH + ++ D A EM K G + N ++
Sbjct: 454 NLIQESGCTPNLVTYNSL-VHGLC---KSRRFDQAEYLLREMTRKQGCSPDIITYNTVID 509
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
G SK + ++F + G+ P+ TY+ VI S C+ ++L M +
Sbjct: 510 GLCKSKRVDRAYKLFLQMLS-DGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFD 568
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P A +G L+ GF K + ++LQ++ G V ++I I L K R +A L
Sbjct: 569 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 628
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L+ ML G+ P+ TY L+ GF E A LF M GCEPD+ + L
Sbjct: 629 LETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVD 688
Query: 335 GGEYETALKVCRASMA 350
Y+ L SM
Sbjct: 689 KKSYKDLLAEVSKSMV 704
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 3/270 (1%)
Query: 116 HSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++ +++G N D A++ +EM++ + V N L+ G + ++ + E
Sbjct: 229 YNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMV 288
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G+ P++ T+N ++ C++G +S+LA M ++ RP+ + L++G K+
Sbjct: 289 D-RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNV 347
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ ++ G V Y+I LCK R +EA L+ M +G PNL TY L
Sbjct: 348 DRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTL 407
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G K E A +L S+ + G PD + + LC+ G + ALK+ + +G
Sbjct: 408 IDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 467
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLM 383
P T +L+ GL +V EA+ + M
Sbjct: 468 TPSVITYTALMEGLCRTGRVDEAHHIFKEM 497
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 109/258 (42%), Gaps = 5/258 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q N ID A ++ G + V L + ++ IF P P++
Sbjct: 172 QMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP-----SPDA 226
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN +I C D L EM + + P+ + +L+ G K K + ++L
Sbjct: 227 IAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHE 286
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G+ +N + LCK + E A +LL M R +P+ TY LI G K+ N
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ AK L + G PD + + LC+ G + A ++ + KG P+ T +
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406
Query: 363 LVTGLASISKVAEANELI 380
L+ GL SK +A EL+
Sbjct: 407 LIDGLCKASKTEKAYELL 424
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 28/337 (8%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERF 113
R+LD A AP+S + + + L Q N + +L++ K R P++
Sbjct: 150 RMLD----AGYAPDS----YTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEV------ 195
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIF 169
V++I+ + + + A++ F + S DA+ NA++ G + +
Sbjct: 196 SVYTILTRAFCKTGRLKDALEIFRNI------PSPDAIAYNAIIHGHCRKNDCDGALEFL 249
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E + + P+ TYN +I C++ + +L EM + + P+ F ++ G K
Sbjct: 250 KEMNE-RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCK 308
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
K+E +L +M + YN I LCK + + AK L+D +S G P++ T
Sbjct: 309 AGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVT 368
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y L G K G ++ A +L M+ GC P+ + LC+ + E A ++ + +
Sbjct: 369 YSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLV 428
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G+VP T +V GL ++ +A +++ M KR
Sbjct: 429 SSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 465
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 148/354 (41%), Gaps = 23/354 (6%)
Query: 32 EAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHF 91
E + TI + RLK FR + SP D +A++ + + N
Sbjct: 194 EVSVYTILTRAFCKTGRLKDALEIFRNI----------PSP-DAIAYNAIIHGHCRKNDC 242
Query: 92 NAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSV 146
+ + L+E+ R PD+ ++I++ G +A+ D A + EM G+
Sbjct: 243 DGALEFLKEMNERKVAPDV------FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDT 296
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
N+++ G + +E + + P+ TYN +I C+ + ++
Sbjct: 297 VTFNSIMDGLCKAGKFERAHSLLAVMAE-RNCRPSCCTYNTLISGLCKQQNVDRAKDLVD 355
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
E P+ + +L G K + ++ ++++ M G + YN I LCK
Sbjct: 356 EFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKAS 415
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
++E+A LL+ ++S G P++ TY ++ G KEG L+ A K+ M GC P +
Sbjct: 416 KTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYT 475
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
LC+ G + A + + ++K SLV G S+ EA +++
Sbjct: 476 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 529
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 6/247 (2%)
Query: 141 GLRQS--VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
G+R + +D NAL+ G +E+ +F + G PN +TYN V+ C+ G
Sbjct: 531 GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDM-ACRGCVPNIKTYNIVMDGLCKHGKV 589
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ L M P+ + +++ G +K K ++ +VL M + GI YN
Sbjct: 590 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ CK +R ++A +L M+ G+ P+ TY LI G + L A +L M GC
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709
Query: 319 EPDSYCFFMFTYF--LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
S C T LC+ G + AL + G + T + L ++ EA
Sbjct: 710 VV-SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 768
Query: 377 NELIGLM 383
+ L+ M
Sbjct: 769 SSLLSEM 775
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKN---YEEVKRIFTEFPKVYGIEPNS 182
ID A + +EM G ++ N L+ G C SK YE ++ + + G P+
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS-----GFVPDV 436
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++ C+ G ++ M ++ P+ + L+ G + + ++ + +
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + Y + CK R++EA+ ++DG+ RG P +D Y L+ G+ KEG
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGT-PYIDVYNALMDGYCKEGR 553
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+ +F M GC P+ + + LC+ G+ + A + + G VP +
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613
Query: 363 LVTGLASISKVAEANELIGLM 383
++ GL SK EA +++ M
Sbjct: 614 IIDGLFKASKPKEARQVLDQM 634
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ ++ + L +A+ +LLE L + PD+ ++I++ G + +D A
Sbjct: 402 VTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVV------TYTIIVDGLCKEGRLDKA 455
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK---------------- 174
++ E M K G SV AL+ G + +E IF E
Sbjct: 456 LKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNG 515
Query: 175 -------------VYGIE--PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
V GI P + YN ++ +C+ G + ++ +M + PN
Sbjct: 516 YCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKT 575
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +++ G K K ++ L+ M G V YNI I L K + +EA+ +LD M+
Sbjct: 576 YNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMI 635
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ----G 335
GI P+ TY L+ F KE + A + +M G +PD+ + L Q G
Sbjct: 636 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLG 695
Query: 336 GEYE 339
YE
Sbjct: 696 DAYE 699
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +++ C +G + I EM K +A + L+ G+ K + ++
Sbjct: 466 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 525
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV+ + ++VYN + CK R +E + + M RG PN+ TY ++ G
Sbjct: 526 QKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDG 582
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G ++ A SM + GC PD + + L + + + A +V + G P
Sbjct: 583 LCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPD 642
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
T +L +A K ++ +G++K
Sbjct: 643 AVTYNTL---MAQFCKEERFDDAVGILK 667
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 113/253 (44%), Gaps = 15/253 (5%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKR-----IFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+R+ ++ L ++S+ + +K +F + G + ++ T N +++ E+G
Sbjct: 80 IRERLEQWRGTLQPAVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENG 139
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---GIASGVN 253
S + ++ M P++ + L++ + ++ + K M++K G V+
Sbjct: 140 SSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQ---IDKAFTMLDKAKVRGFKPEVS 196
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VY I ++ CK R ++A + + S P+ Y +IHG ++ + +GA + M
Sbjct: 197 VYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEM 252
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
PD + + + LC+ + + A ++ + +G P T S++ GL K
Sbjct: 253 NERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKF 312
Query: 374 AEANELIGLMKKR 386
A+ L+ +M +R
Sbjct: 313 ERAHSLLAVMAER 325
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 53/266 (19%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR------------------------- 210
+G+E N+ TYN I C+ G S+L+EM
Sbjct: 743 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASK 802
Query: 211 --------KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
K + + F LL+ F K + ++ +L +M + G + V YN+ I L
Sbjct: 803 LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCL 862
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CKL + ++A L D M RGI + +Y LI+G +G + A ++ M + CE D
Sbjct: 863 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDD 922
Query: 323 YCFFMFTYFLCQGGEYETALKVCRAS----MAKGW--VPHFS--TMKSLVTGLASISKVA 374
+ + +++T C +S + W VP+ + K V+GLAS+
Sbjct: 923 ----LKWEDVAPHSQFQTTFGPCYSSFHSRFSSTWCSVPYETNKAHKEFVSGLASL---- 974
Query: 375 EANELIGLMKKRFPKSGDMWNAALPR 400
N+ I RFP + A+P+
Sbjct: 975 -CNKEI---PDRFPFAFKELTPAIPK 996
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 139/384 (36%), Gaps = 82/384 (21%)
Query: 91 FNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQS 145
+ I + E++ R P+++ ++IV+ G + +D A E M G
Sbjct: 554 LDEIPNVFEDMACRGCVPNIK------TYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 607
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V + N ++ G + +E +++ + + GI P++ TYN ++ FC+ IL
Sbjct: 608 VVSYNIIIDGLFKASKPKEARQVLDQMIQA-GIPPDAVTYNTLMAQFCKEERFDDAVGIL 666
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM---------------------- 243
M + + P+ + L++G + ++ D +++ M
Sbjct: 667 KNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCK 726
Query: 244 EKC--------------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS--------- 280
E C G+ + YNI I LCK R +EA +LL M +
Sbjct: 727 EGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTT 786
Query: 281 ------------------------RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+G+ T+ LI F K L+ A L M
Sbjct: 787 VIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQR 846
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
GC P + M LC+ + + A ++ +G V + L+ GL + EA
Sbjct: 847 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 906
Query: 377 NELIGLMKKRFPKSGDM-WNAALP 399
+++ M + D+ W P
Sbjct: 907 LQVLEEMASSDCEIDDLKWEDVAP 930
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ F M K+G + + N L+ G + E+ + T K P TYN
Sbjct: 416 IDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPT-PTLVTYN 474
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+IK +C+SGD+ +L M+ +P+ + L++GF K K E + M
Sbjct: 475 IIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ Y I CK ++ + A +L+ M G +PN+ TY LIHG K+ N GA
Sbjct: 535 GLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 594
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++L M PD + LC G AL++ + G +P+ T SL+
Sbjct: 595 EELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQA 654
Query: 367 LASISKVAEANELIGLMKKR 386
L +V EA E+ +KK+
Sbjct: 655 LGQEGRVEEAEEMFSELKKQ 674
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 119/278 (42%), Gaps = 9/278 (3%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
A+S L LK RP ++I++ Y + D A++ E M G + +
Sbjct: 454 AMSMLTNMLKGRP----TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYT 509
Query: 151 ALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
L+ G C +SK E +F E G+ PN TY +I +C+ +L M+
Sbjct: 510 ELISGFCKISK-MELASGMFNEMMD-RGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R RPN + +L+ G K++ + ++ ++M + I+ V Y+ I LC
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
A + + M+ G PNL TY LI G+EG +E A+++F+ + G PD +
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G+ + A + G P T L+ GL
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 10/275 (3%)
Query: 115 VHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+S ++ G N ++ A+ EM ++G+ +V A ++ E+ +IF +
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDM 359
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSI--LAEMRRKSIRPNATDFGLLLAGFYKE 230
K G +PN TY +I SG S +I M R + PN + L+ +
Sbjct: 360 KK-KGCKPNVYTYTSLI-----SGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMEN 413
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+ + V MM K G + YN I+ C + +E+A ++L ML P L TY
Sbjct: 414 MEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTY 473
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+I G+ G+ + A ++ M GC+PD + + C+ + E A + M
Sbjct: 474 NIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMD 533
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+G P+ T +L++G K+ A ++ MK+
Sbjct: 534 RGLCPNEVTYTALISGYCKDEKLDCAARMLERMKR 568
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 1/256 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ AM M K ++ N ++ G S + + R+ E K G +P+ +Y +
Sbjct: 452 EKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVL-ELMKANGCQPDEWSYTE 510
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC+ + EM + + PN + L++G+ K+ K + ++L+ M++ G
Sbjct: 511 LISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSG 570
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V YN+ I L K A+ L ML I P++ TY +I+G G + A
Sbjct: 571 CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLAL 630
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F M GC P+ + + L Q G E A ++ +G +P T ++
Sbjct: 631 EMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVC 690
Query: 368 ASISKVAEANELIGLM 383
KV A + +G M
Sbjct: 691 VMSGKVDRAFDFLGEM 706
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 137/344 (39%), Gaps = 40/344 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S ++ L + N + E+ TR + IV I+ A + F +
Sbjct: 300 TYSTLINGLCNSGRVNEALDFISEM-TRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFID 358
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET------------ 184
M K G + +V +L+ G +S+ +F + G+ PN+ T
Sbjct: 359 MKKKGCKPNVYTYTSLISGQRVSR---MAIGLFHRMSR-DGVVPNTVTYNALMNVLMENM 414
Query: 185 -----------------------YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
YN++I+ +C GD+ S+L M + P +
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYN 474
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+++ G+ + +VL++M+ G Y I CK+ + E A + + M+ R
Sbjct: 475 IIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G+ PN TY LI G+ K+ L+ A ++ M GC P+ + + + L + + A
Sbjct: 535 GLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 594
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
++C+ + + P T +++ GL + + A E+ M K
Sbjct: 595 EELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVK 638
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 5/277 (1%)
Query: 111 ERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+ F S++L Y + +D A + F MD+ G + + L+ G S E
Sbjct: 262 DTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFI 321
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+E + +G+ P T+ I + C+ G + I +M++K +PN + L++G +
Sbjct: 322 SEMTR-HGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG--Q 378
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+G + M + G+ YN + L + + A + + M G PN +
Sbjct: 379 RVSRMAIG-LFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSS 437
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y LI G+ G+ E A + +M G P + + C G+ + A++V
Sbjct: 438 YNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMK 497
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A G P + L++G ISK+ A+ + M R
Sbjct: 498 ANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 141/375 (37%), Gaps = 59/375 (15%)
Query: 65 ASLAPES----------PLDRMAFSIAVSKLSQ----ANHFNAISQLLEELKTRPDLRQN 110
ASL PE P+ + F + +S+ + F ++ L E + RP
Sbjct: 100 ASLTPEKAAFVAARCLVPVRALEFLLFLSREHSHKYGPDTFAKVAMRLLESRDRPAAVGR 159
Query: 111 ERFHV-----HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
R H+ + + N +D Q +M + + LN L + + Y ++
Sbjct: 160 ARIHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQI 219
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
R G++PN YN VI + C+ G+ SI+ ++ + ++P+ + ++
Sbjct: 220 LR--------EGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMIL 271
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G+ + + ++ M++ G Y+ I LC R EA + M G+ P
Sbjct: 272 GYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLP 331
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF------------------- 326
+ T+ I G +E A K+F M GC+P+ Y +
Sbjct: 332 TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRM 391
Query: 327 --------MFTY-----FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
TY L + E ++AL V G +P+ S+ L+ G +I
Sbjct: 392 SRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDT 451
Query: 374 AEANELIGLMKKRFP 388
+A ++ M K P
Sbjct: 452 EKAMSMLTNMLKGRP 466
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 36/286 (12%)
Query: 77 AFSIAVSKLSQANHFNAISQL----LEELKTRPDLRQNERFHVHSIVLYGQAN--MIDHA 130
+++ + L++ N+F+ +L LEE K PD+ +S V+ G N I A
Sbjct: 577 TYNVLIHGLTKQNNFSGAEELCKVMLEE-KISPDVV------TYSTVINGLCNNGAIPLA 629
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ F +M K+G ++ ++L+ EE + +F+E K G+ P+ TY K+I+
Sbjct: 630 LEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKK-QGLIPDEVTYVKMIE 688
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY----------------- 233
SG + L EM +P + +L+ G E Y
Sbjct: 689 VCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDD 748
Query: 234 ----EDVGKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
+DV VL + + +Y+ + L + R EA L M+S+ PN D
Sbjct: 749 QIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQD 808
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
TYKH + + ++ A +F M++ CE + LCQ
Sbjct: 809 TYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQ 854
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 8/230 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++ +S + + S + E+ R L NE + I Y + +D A +
Sbjct: 504 DEWSYTELISGFCKISKMELASGMFNEMMDR-GLCPNEVTYTALISGYCKDEKLDCAARM 562
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNY---EEVKRIFTEFPKVYGIEPNSETYNKVIK 190
E M + G R +V N L+ G N+ EE+ ++ E I P+ TY+ VI
Sbjct: 563 LERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLE----EKISPDVVTYSTVIN 618
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C +G + +M + PN + L+ +E + E+ ++ ++K G+
Sbjct: 619 GLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Y I+ + + A L M++ G +P L TY LI G E
Sbjct: 679 DEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 5/239 (2%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
Q ++EL RP R + + L+ + + A + EM GL A++
Sbjct: 254 QKMKELGWRPATRA----YAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNA 309
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
R+F E K+ G EPN TYN +++ FC G ++L +MR + P
Sbjct: 310 YCREGRMSGAVRVF-ESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEP 368
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + LL+ G + E ++L++ME G+A+ YN+ I +LCK + +EA +L
Sbjct: 369 DVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
DG+ RGI+PN T+ +I+G K G + A M + GC PD+Y + F LC+
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCK 487
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM ++M + G+ V N L+ G + + E R+ + G+ + TYN +I
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLL-RLMEGNGLAADQYTYNVLI 412
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C++G S+ + + IRPN+ F ++ G K K++ L+ M G A
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCA 472
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y+ I++LCK K S E + +D ML + +KP+ Y +I KE N A ++
Sbjct: 473 PDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRI 532
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ M + GC PD + C G A V G + +L+ G S
Sbjct: 533 WGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTS 592
Query: 370 ISKVAEANELIGLM 383
I K A ++ M
Sbjct: 593 IGKTDHAVTILKHM 606
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
HA + M + G R N+L+LG ++ + + +F + P + G ++ +Y +
Sbjct: 147 HAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP-LRGFSQDAVSYAAL 205
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I+ FCE+G + E+ +P+ L+ G + E+ +LQ M++ G
Sbjct: 206 IEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGW 261
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y + C+ +++EEA+ +L+ M G+ P T +++ + +EG + GA +
Sbjct: 262 RPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVR 321
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+F SM GCEP+ + + C G+ A+ + G P T L+ G
Sbjct: 322 VFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQC 381
Query: 369 SISKVAEANELIGLMK 384
+ A L+ LM+
Sbjct: 382 IDGHIESAFRLLRLME 397
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 10/315 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D ++++ + + + +L EL+ +PD+ + H+ ++ G A + +
Sbjct: 198 DAVSYAALIEGFCETGRVDEALELFRELE-QPDM------YTHAALVKGLCDARRGEEGL 250
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
++M + G R + A AL+ + EE +++ E G+ P + T V+ +
Sbjct: 251 YMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFD-NGLVPCAVTCTAVVNA 309
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C G S + M+ K PN + ++ GF K +L M +CG+
Sbjct: 310 YCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPD 369
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN+ I+ C E A LL M G+ + TY LI K G ++ A LF
Sbjct: 370 VVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ G P+S F LC+GG+++ A ++ G P T + L
Sbjct: 430 GLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTK 489
Query: 372 KVAEANELIGLMKKR 386
E I M ++
Sbjct: 490 GSREGLSFIDEMLQK 504
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A F+ ++ G+R + N ++ G ++ V F E G P++ TY+
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFD-VACTFLEKMVSAGCAPDTYTYS 479
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I++ C++ S S + EM +K ++P+ ++ +++ +KE Y ++ M
Sbjct: 480 PFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSL 539
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + V Y +++ C R EA+ ++ M GI + Y LI G G + A
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599
Query: 307 KKLFASMTNGGCEPDSYCFFM 327
+ MT P+ + FF+
Sbjct: 600 VTILKHMTGVASMPNHFTFFI 620
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ T+N +I +C + + +M + +A + L+ GF + + ++
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEA 218
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + +E+ + + + ++ LC +R EE +L M G +P Y L+
Sbjct: 219 LELFRELEQPDMYTHAAL----VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDL 274
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +E E A+K+ M + G P + C+ G A++V + KG P+
Sbjct: 275 WCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPN 334
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T ++V G ++ KV +A L+ M++
Sbjct: 335 VWTYNAMVQGFCNVGKVYKAMALLDQMRE 363
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 63/112 (56%)
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ V+ + M++ S+ +A + +L GF +E + ++V ++ M++ + ++Y
Sbjct: 648 ADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSL 707
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ CKL+ +A ALL M+ G PNL +Y++L+ GF EG + AK++F
Sbjct: 708 VNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIF 759
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I++LC+ A+ L M+ G +P+ T+ LI G+ + L+ A+ LF M
Sbjct: 131 TYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKM 190
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G D+ + C+ G + AL++ R P T +LV GL +
Sbjct: 191 PLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRG 246
Query: 374 AEANELIGLMKK 385
E ++ MK+
Sbjct: 247 EEGLYMLQKMKE 258
>gi|224056581|ref|XP_002298921.1| predicted protein [Populus trichocarpa]
gi|222846179|gb|EEE83726.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 144/281 (51%), Gaps = 5/281 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
++ ++KL+QA +F+AI +++++K R + F + I +YGQ A I AM+T +
Sbjct: 46 YTQVINKLAQAKNFDAIEDIMQKIKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETLFD 105
Query: 137 MDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M K Y +V + N +L + +K ++ V ++ + P + GIE + + N +IK CE+
Sbjct: 106 MPKGYNCWPNVKSFNLVLNLLVSAKVFDVVHEVYLQAP-MLGIEIDVCSLNILIKGLCEN 164
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
GD + +++L E ++ PN F L+ G K+ K ++ +L+ MEK GI + +
Sbjct: 165 GDLEAAFNVLDEFPKQRCEPNVRTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTITF 224
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG-FGKEGNLEGAKKLFASMT 314
NI I L K + E LL+ M +G +PN +Y+ +++G E +EG K+ M
Sbjct: 225 NILISGLRKQGKVVEGLELLERMNIKGCEPNAGSYQEILYGLLDAEKYVEG-KEFMVRMI 283
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G +P + + LC+ V + +G+VP
Sbjct: 284 GQGVDPSFVSYKKLVHGLCKERLLRDLDWVLKQMARQGFVP 324
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 99/227 (43%), Gaps = 2/227 (0%)
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE-SGDSSSVYSILAEMRRK-SIRPN 216
+KN++ ++ I + +++ ++ VIK + + +G L +M + + PN
Sbjct: 56 AKNFDAIEDIMQKIKLDKSCRLSNDFFHNVIKIYGQLAGRIKKAMETLFDMPKGYNCWPN 115
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
F L+L ++ V +V GI V NI I+ LC+ E A +LD
Sbjct: 116 VKSFNLVLNLLVSAKVFDVVHEVYLQAPMLGIEIDVCSLNILIKGLCENGDLEAAFNVLD 175
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+ +PN+ T+ L+HG K+G ++ A L M G + D+ F + L + G
Sbjct: 176 EFPKQRCEPNVRTFSTLMHGLCKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQG 235
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ L++ KG P+ + + ++ GL K E E + M
Sbjct: 236 KVVEGLELLERMNIKGCEPNAGSYQEILYGLLDAEKYVEGKEFMVRM 282
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 96/232 (41%), Gaps = 13/232 (5%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR-RKSIRPNAT 218
K+ + ++ ++ K +PN Y +VI ++ + ++ I+ +++ KS R +
Sbjct: 21 KDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNFDAIEDIMQKIKLDKSCRL-SN 79
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNVY------NIRIQSLCKLKRSEEA 271
DF + Y + G++ + ME + G N + N+ + L K +
Sbjct: 80 DFFHNVIKIYGQL----AGRIKKAMETLFDMPKGYNCWPNVKSFNLVLNLLVSAKVFDVV 135
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ GI+ ++ + LI G + G+LE A + CEP+ F +
Sbjct: 136 HEVYLQAPMLGIEIDVCSLNILIKGLCENGDLEAAFNVLDEFPKQRCEPNVRTFSTLMHG 195
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC+ G+ + A + +G T L++GL KV E EL+ M
Sbjct: 196 LCKKGKVDEAFGLLERMEKEGIDADTITFNILISGLRKQGKVVEGLELLERM 247
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 154/358 (43%), Gaps = 47/358 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMID 128
D +A+ + L Q + N QL +E+ R ++ +SI++ G + D
Sbjct: 260 DAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 319
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F+EM G+ V + L+ G LS +E+ K +F E V GI+P+ T + +
Sbjct: 320 EARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV-GIQPDVTTSSVL 378
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+ G +L + ++ P+ L+ G +H+ ++ M+K G
Sbjct: 379 IDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 438
Query: 249 AS-----------------------------------GVNV------YNIRIQSLCKLKR 267
G+N Y+I I LCK R
Sbjct: 439 MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 498
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA+ L M + G+ P++ +Y LIHGF + G + AK LF M + G +PD F +
Sbjct: 499 EDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSV 558
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC+ G+ A ++ + +G +P+ T +LV GL +++EA +L M+K
Sbjct: 559 LIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 616
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 11/269 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE---EVKRIFTEFPKVYGI--EPN 181
I A Q F +M K G +V L+ G S N + E+ + YGI +PN
Sbjct: 423 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 482
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ +Y+ +I C+ G + EM+ + P+ + L+ GF + K++D +
Sbjct: 483 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 542
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ V +++ I LCK + EA LL+ M+ RG PN TY L+ G
Sbjct: 543 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 602
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK------GWVP 355
+ A +LF M GC PD + LCQ G +TAL++ + ++ + P
Sbjct: 603 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 662
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMK 384
+ ++ GL + EA EL MK
Sbjct: 663 DVISYSIIIDGLCKHGREDEARELFKEMK 691
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 112/271 (41%), Gaps = 11/271 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF---PKVYGIE--PN 181
I A Q F M K G R A L+ G + + E YGI+ P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+Y+ +I C+ + EM+ + + P+ + L+ GF + K+E +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M GI S V ++ I LCK + EA LL+ M+ RG ++ TY LI G +
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG------WVP 355
+ A +LF SM GC PD+ + LCQ G TAL++ + + P
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ ++ GL + EA EL MK +
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQ 331
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 44/270 (16%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI++ G + D A + F+EM G+ V + +L+ G S +++ K +F E
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G++P+ T++ +I C+ G +L M ++ PN + L+ G +
Sbjct: 546 DI-GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604
Query: 234 EDVGKVLQMMEKCGIASGV--------------NV------------------------- 254
+ ++ M+K G V N+
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664
Query: 255 --YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+I I LCK R +EA+ L M + G+ PN+ +Y LIHGF + G LE AK LF
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
M + G + ++ + + + C+ G+ + AL
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 6/208 (2%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY+ +IK C S + M++ RP+A +G L+ G + K + Q M
Sbjct: 47 TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 106
Query: 244 EKCGIASGVNV------YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
G+ Y+I I LCK +R +EA+ L M ++G+ P++ +Y LIHGF
Sbjct: 107 LNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGF 166
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ G E AK LF M + G D M LC+ G+ A ++ + +G +
Sbjct: 167 CRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 226
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ GL +++EA L M+K
Sbjct: 227 VTYSTLIKGLCMKHRISEATRLFMSMQK 254
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 110/269 (40%), Gaps = 11/269 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF---PKVYGIE--PN 181
I A + F M K G R A L+ G + N ++ E YGI+ P
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+Y+ +I C+ + EM+ + I P+ + L+ GF K+E +
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M GI V ++ I LCK + EA LL+ ++ RG P++ T L+ G +
Sbjct: 362 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKH 421
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK------GWVP 355
+ A +LF M GC P+ LCQ G + AL++ + ++ P
Sbjct: 422 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 481
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + ++ GL + EA EL MK
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMK 510
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 41/220 (18%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M I+P+ T G+L+ F KE K + ++L++M + G + Y+ I+ LC R
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 268 SEEA--------------KALLDGMLSRGI---------------------------KPN 286
EA A+ G L +G+ KP
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
L +Y +I G K+ + A++LF M G PD + + C+ G++E A +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G +T L+ L KV EANEL+ +M +R
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQR 220
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 2/279 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G M++ + + M + G+ S+ + N L+ G + SK E +R+F E + I P
Sbjct: 189 FGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVF-EVMENGKIGP 247
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +IK +CE G + + L M +++ P+ + L+ Y E ++ +
Sbjct: 248 DVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLY 307
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M++ G+ +VY++ I LCK + E + + M+S+G K N+ Y LI K
Sbjct: 308 HEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKC 367
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN+ A LF M G EPD + + LC+ G + AL+ KG +
Sbjct: 368 GNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFY 427
Query: 361 KSLVTGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
SL+ GL +V EA + ++KK P +NA +
Sbjct: 428 SSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALI 466
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 4/255 (1%)
Query: 132 QTFEEMDKYGLRQ-SVDALN--ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+ FE++ LR + D + L+ C +++ ++ E + G+E Y+ V
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDE-KGLEIPPHVYSLV 325
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+ G Y++ M K + N + L+ K + + + M+K G+
Sbjct: 326 IGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGL 385
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y + + SLCK R +EA ++ +G+ N Y LI G GK G ++ A++
Sbjct: 386 EPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAER 445
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+F M GC PDSYC+ L + G+ + AL + + G T L+TGL
Sbjct: 446 IFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLF 505
Query: 369 SISKVAEANELIGLM 383
+ EA L LM
Sbjct: 506 REHRNEEALTLWDLM 520
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 4/268 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
HV+S+V+ G + FE M G + +V AL+ N E +F
Sbjct: 320 HVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKR 379
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G+EP+ TY ++ S C+SG + K + NA + L+ G K
Sbjct: 380 MKK-EGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSG 438
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ ++ ++ M K G YN I +L K + +EA AL M G + TY
Sbjct: 439 RVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYT 498
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G +E E A L+ M + G P + F + LC G+ A K+
Sbjct: 499 ILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPM 558
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANEL 379
G +P + ++ L ++ EA +L
Sbjct: 559 GVIPE-TAFDDMINILCKAGRIKEACKL 585
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 22/286 (7%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
EL+T+PD+ RF + G+ H ++ + + V A N +L
Sbjct: 119 ELQTKPDVAI--RFFTWA----GKQKKYTHNLECYVSL------IDVLATNGVL------ 160
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+ VK +F++F K G+ + N +IKSF G V + M+ I P+
Sbjct: 161 ---DSVKSVFSKF-KEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFS 216
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G E +V ++ME I V YN I+ C++ ++ +A L M
Sbjct: 217 YNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAME 276
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
R + P+ TY LI EG+ + L+ M G E + + + LC+ G+
Sbjct: 277 LRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRV 336
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
V ++KG + + +L+ A + EA L MKK
Sbjct: 337 EGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKK 382
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 3/239 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + + + V+ L ++ + + +E + + N F+ I G++ +D A +
Sbjct: 388 DEVTYGVIVNSLCKSGRLDEALEYMEFCSGK-GVAVNAMFYSSLIDGLGKSGRVDEAERI 446
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM K G NAL+ +E + +V G + TY +I
Sbjct: 447 FYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRM-EVDGCDQTVYTYTILITGLF 505
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ ++ M K I P A F L G K K+L M G+
Sbjct: 506 REHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPE-T 564
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
++ I LCK R +EA L DG++ RG + LI+ K GN + A KL S
Sbjct: 565 AFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRS 623
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 111/277 (40%), Gaps = 7/277 (2%)
Query: 102 KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
+T DL+ + + +L G +NM + + TF M + ++ S ++ +L L
Sbjct: 67 RTHQDLKPSPWVNQILALLDGSSNM-ESNLDTFCHM--FLIKLSPSFVSFILRSTELQTK 123
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+ R FT K N E Y +I +G SV S+ ++ + +
Sbjct: 124 PDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSN 183
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ F E+V V + M++ GI + YN + L K E A+ + + M +
Sbjct: 184 SLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENG 243
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
I P++ TY +I G+ + G A + +M PD + G++++
Sbjct: 244 KIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSC 303
Query: 342 LKVCRASMAKGW--VPHFSTMKSLVTGLASISKVAEA 376
L + KG PH ++ ++ GL K E
Sbjct: 304 LGLYHEMDEKGLEIPPHVYSL--VIGGLCKDGKRVEG 338
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 2/307 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D A++ +S +AN +++L+ +K+R L +++ I + +D A++
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIM-IGSFCSRGKLDLALEI 195
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEE+ K +V L+ IL + ++ E G+EP++ TYN +I+ C
Sbjct: 196 FEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLS-KGLEPDTLTYNAIIRGMC 254
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +L + + +P+ + +LL K+ + K++ M G V
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++I I +LC+ + EEA LL M +G+KP+ Y LI GF +EG L+ A + M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ GC PD + LC+ G+ + AL+V G P+ S+ +L + L S
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434
Query: 374 AEANELI 380
A E+I
Sbjct: 435 YRALEMI 441
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 2/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + E +++YG + V A NAL+ G I + E R+ K G P+ TYN
Sbjct: 120 IGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRM-KSRGFLPDVVTYN 177
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I SFC G I E+ + + P + +L+ + + K+L M
Sbjct: 178 IMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK 237
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ YN I+ +CK ++A LL + SRG KP++ TY L+ G
Sbjct: 238 GLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEG 297
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+KL + M + GC+P+ + LC+ G+ E A+ + R+ KG P L+ G
Sbjct: 298 EKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAG 357
Query: 367 LASISKVAEANELIGLM 383
++ A E + M
Sbjct: 358 FCREGRLDLATEFLEYM 374
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 122/261 (46%), Gaps = 1/261 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M+D A + + G + + N LL + + E +++ +E + G +PN T+
Sbjct: 258 MVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI-GCKPNVVTH 316
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ +I + C G ++L M+ K ++P+A + L+AGF +E + + + L+ M
Sbjct: 317 SILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMIS 376
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + YN + LC+ ++++A + + + G PN+ +Y L G+
Sbjct: 377 DGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYR 436
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A ++ + N G +PD + LC+ G + A+++ + + P+ + ++
Sbjct: 437 ALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILL 496
Query: 366 GLASISKVAEANELIGLMKKR 386
GL +++ +A E++ M ++
Sbjct: 497 GLCKVNRANDAIEVLAAMTEK 517
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++P++ Y+ +I FC G L M P+ ++ ++AG + K +
Sbjct: 343 GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQA 402
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V + +++ G V+ YN +L A ++ +L++GI P+ TY LI
Sbjct: 403 LEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISC 462
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++G ++ A +L M +G P+ + + LC+ A++V A KG P+
Sbjct: 463 LCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPN 522
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+T L+ G+ AEA EL + S D +N
Sbjct: 523 ETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDSFN 561
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 138/285 (48%), Gaps = 7/285 (2%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+I+L G ++N ++ A + M + G NAL+ G +K++ + + E K
Sbjct: 46 AILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK 105
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ + P TY ++ C++ + +L EMR K PN + +++ G +E K +
Sbjct: 106 NHCL-PTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLD 164
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ K+L+ M G V YN I+ LCK R +EA+ L M + P++ +Y +I
Sbjct: 165 EAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVI 221
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+G K G+L+ A ++ M+N GC PD + C+GGE E A+ + + + G
Sbjct: 222 NGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCR 281
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
P+ SL+ L + + +A +++ M++R F +NA +
Sbjct: 282 PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 326
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 29/324 (8%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+++ V L + + ++LEE+ R PD+ F I + + +D A +
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF----IKGLCKCDRVDEARKF 204
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + V + ++ G S + + R+ G P+ TY+ +I FC
Sbjct: 205 LARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN-RGCTPDVVTYSSLIDGFC 260
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM---MEKCGIAS 250
+ G+ +L M + RPN + LL H+ +GK M ME+ G
Sbjct: 261 KGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL---HRLGHIGKAEDMLVEMERRGFTP 317
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI----------HGFGKE 300
V YN I LCK +R ++AKA+ D M+ RG PN +Y LI G K
Sbjct: 318 DVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKG 377
Query: 301 GNLEGAKKLFASMTNGG-CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A LF+ + + CEPD + + + C+ + + AL++ + + K + T
Sbjct: 378 GRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVT 436
Query: 360 MKSLVTGLASISKVAEANELIGLM 383
LV GL ++++A ++ M
Sbjct: 437 WNILVHGLCVDDRLSDAETMLLTM 460
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 4/217 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G E N TYNK++ ++ EM KS +P+A F +LL G + ++ E
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+L M++ G +YN I K K +A L M+ P + TY +++ G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K A KL M + GC P+ Y + + LC+ + + A K+ +G+ P
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
T S + GL +V EA + + R P + D+
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLA----RMPVTPDV 214
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 152/334 (45%), Gaps = 22/334 (6%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQAN 125
P +P D ++++ ++ L ++ ++ S++L+ + R PD+ I + +
Sbjct: 209 PVTP-DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL----IDGFCKGG 263
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++ AM + M K G R ++ A N+LL + + + + E + G P+ +Y
Sbjct: 264 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER-RGFTPDVVSY 322
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL----------LAGFYKEHKYED 235
N I C++ ++ M + PNA+ + +L L G K ++++
Sbjct: 323 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDE 382
Query: 236 VGKVL-QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ +++++ V YN+ + S CK ++ ++A + ML + N+ T+ L+
Sbjct: 383 ACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILV 441
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
HG + L A+ + +M + G PD + +C+ G+ AL++ ++ G V
Sbjct: 442 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 501
Query: 355 PHFSTMKSLVTGLASISKVAEANELIG-LMKKRF 387
P T +L+TGL + EA L L+++R+
Sbjct: 502 PDVVTYSALITGLVHENMAEEAYLLFTKLVERRW 535
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 151/380 (39%), Gaps = 56/380 (14%)
Query: 57 RILDICCGAS--------LAPESPLDRMAFSI---AVSKLSQANHFNAISQLLEELKTRP 105
R+L+ C A A + P R ++ + + L + F A+ L+EE++
Sbjct: 126 RVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMR--- 182
Query: 106 DLRQNERF---HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQS-------VDAL---- 149
R+N +F +V +++ + A M+ A++ +EM KYG +DAL
Sbjct: 183 --RENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNG 240
Query: 150 -----------------------NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+LL G E K + + + G EP+ YN
Sbjct: 241 SVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREA-GFEPDIVVYN 299
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + +G Y +L EMRRK PN F L+ + K E+ +V M+ C
Sbjct: 300 NLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSC 359
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y I CK + + LLD M+ +G PN TY H++ K+ LE
Sbjct: 360 GCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEEC 419
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L M GC PD + + C+ GE + ++V A G P T ++ G
Sbjct: 420 IELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHG 479
Query: 367 LASISKVAEANELIGLMKKR 386
S + EA E M R
Sbjct: 480 FLSQRCLVEACEFFKEMVGR 499
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 38/302 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A + A +EM + +V + L+ K EE R+F E G
Sbjct: 305 YAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSC-GCPA 363
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TY +I FC+ G S Y +L M ++ PN + ++A K+ + E+ +++
Sbjct: 364 DAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELM 423
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G +N+YNI I+ CKL +E + + M + G+ P LDT+ +IHGF +
Sbjct: 424 EEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQ 483
Query: 301 -------------------------------------GNLEGAKKLFASMTNGGCEPDSY 323
LE +K +++ + GC+ + Y
Sbjct: 484 RCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVY 543
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ ++ + L G + A C M G +P T L+ GL + A E+ +
Sbjct: 544 AWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKV 603
Query: 384 KK 385
+K
Sbjct: 604 RK 605
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 124/263 (47%), Gaps = 5/263 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF---PKVYGI--EPN 181
I A + F M K G V L+ G + N ++ E Y I +PN
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN ++ C+ G + EM+ + + P+ + L+ GF K+E+ ++L
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD 274
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ + +N+ I +LCK + EAK LL M+ GI P+L TY LI GF G
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 334
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+L A++LF SM + GCEPD + + + + E A+K+ + G P+ T
Sbjct: 335 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 394
Query: 362 SLVTGLASISKVAEANELIGLMK 384
SL+ G+ KV +A +L +MK
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVMK 417
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 140/332 (42%), Gaps = 19/332 (5%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
S A SP ++AF + K +A+ +++ P + H+ L G A
Sbjct: 26 SSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHL----LSGLAK 81
Query: 126 MIDHAMQTF---EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEP 180
I H Q F +M GL LN +LL C+ N ++ F F + G P
Sbjct: 82 -IKHYSQVFSLYNQMRLSGLSSDRCTLN-ILLNCLC--NVNRLREGFAAFAGILRRGYSP 137
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +IK C S + M++ P+ +G L+ G K+
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197
Query: 241 QMM------EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
Q M + V YNI + LCK+ R +EAK L + M ++G+ P++ +Y LI
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLI 257
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
HGF G E +K+L M + G +PD F + LC+ G+ A K+ + G V
Sbjct: 258 HGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 317
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T SL+ G + + A EL M +
Sbjct: 318 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 126/328 (38%), Gaps = 69/328 (21%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PKVY----- 176
D A Q FEEM G+ S+ + N+L+ G + +EE KR+ E P +
Sbjct: 232 DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVL 291
Query: 177 -----------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
GI P+ TYN +I+ FC GD +S + M K
Sbjct: 292 IDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGC 351
Query: 214 -----------------------------------RPNATDFGLLLAGFYKEHKYEDVGK 238
RPN + LL G + K +D K
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKK 411
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ +M+ GIA Y I + LCK EA L + S K ++ LI G
Sbjct: 412 LFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLC 471
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G LE A +LF ++N G EP+ + + + C+ G+ + A + + A G P
Sbjct: 472 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDII 531
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ G +K+ E +L+ M ++
Sbjct: 532 TYNTLMRGFYESNKLEEVVQLLHRMAQK 559
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 43/301 (14%)
Query: 120 LYGQANMIDHAMQTFEEM----DKYGL--RQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
L G N I+ A++ +EM +Y + + +V N ++ G +E K++F E
Sbjct: 184 LCGTGN-INIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEM- 241
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+ P+ +YN +I FC +G +L EM + ++P+ F +L+ KE K
Sbjct: 242 KTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKV 301
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLC------------------------------ 263
+ K+L +M + GI + YN I+ C
Sbjct: 302 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVL 361
Query: 264 -----KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
K + EEA L + ML G +PN+ TY L+ G G ++ AKKLF+ M G
Sbjct: 362 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 421
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
+SY + +F LC+ A+K+ + + + L+ GL K+ A E
Sbjct: 422 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 481
Query: 379 L 379
L
Sbjct: 482 L 482
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 131/335 (39%), Gaps = 16/335 (4%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERF 113
R+LD L P D + F++ + L + +LL E PDL
Sbjct: 271 RLLDEMLDQGLQP----DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 326
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+ + G N A + F M G V + N L+ G + EE +++ E
Sbjct: 327 -IEGFCMVGDLN---SARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 382
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
V G PN TY+ ++K +G + + M+ I N+ +G+ L G K
Sbjct: 383 LV-GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCL 441
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ K+ ++ + N I LCK + E A L + + + G +PN+ TY +
Sbjct: 442 FEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM 501
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
IHGF +EG ++ A L M GC PD + + + E +++ K
Sbjct: 502 IHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDV 561
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
P T +V L+ K E L+ RFP
Sbjct: 562 SPDAITCSIVVDMLSKDEKYQECLHLL----PRFP 592
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM+ + M G + N L+ G + ++ + P +G +P++ YN V
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPS-HGCKPSTVNYNTV 278
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + ++ EM R++ PN F +++ ++ + ++L+ M K G
Sbjct: 279 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 338
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + YN I LC+ + + A LL M S G KP++ TY L+ G A++
Sbjct: 339 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L +MT GC PD+ F FLCQ G A++V + KG P+ T ++++GLA
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458
Query: 369 SISKVAEANELIGLMKKR 386
+K+ +A EL M +
Sbjct: 459 KATKLDQALELFNEMGHK 476
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 120/303 (39%), Gaps = 11/303 (3%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+S L +A +L+E PD R V + G+ + + + G
Sbjct: 78 LSALVHRGDLDAALRLVESSPRPPDAALANRL-VRDLCRRGRPDDAERVVGAC------G 130
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+V A AL G + + +R+ P ++PN+ TYN +I + CE G
Sbjct: 131 PAATVVAYGALTDGYCRAGRLGDARRVVGGMP----VQPNAYTYNPLIHTLCERGQVRDA 186
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
S+L +M + P+ + +LL K Y +++ +M G YN+ +
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+C ++A LL + S G KP+ Y ++ G A +L M C P+
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
F + Y LC+ G + A+++ G + T +++ GL V A L+
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 366
Query: 382 LMK 384
MK
Sbjct: 367 KMK 369
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 132/305 (43%), Gaps = 7/305 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFE 135
++ + L A + +L+ E+ R + NE ++V+Y + ++ A+Q E
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEM-LRENCPPNE--ATFNVVIYSLCRKGLLQQAIQLLE 331
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M K+G ++ NA++ G +N + + ++ K YG +P+ TYN ++K C +
Sbjct: 332 KMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSA 390
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
++ M + P+ F L+ ++ D +V + M G Y
Sbjct: 391 AQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITY 450
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K + ++A L + M +G P+ Y+ L + +E A + + +
Sbjct: 451 STIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQD 509
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P + + LC+ G+ E A+ + ++ G +P T L+ GLA + E
Sbjct: 510 SGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNE 569
Query: 376 ANELI 380
A EL+
Sbjct: 570 ARELL 574
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TYN ++++ C+ ++ MR + PN + +L+ G E +D
Sbjct: 197 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 256
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ + G YN ++ LC +R +A L+ ML PN T+ +I+
Sbjct: 257 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 316
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++G L+ A +L M+ GC + + LC+ + A+ + + G P
Sbjct: 317 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 376
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ GL S ++ +A EL+ M +
Sbjct: 377 IVTYNTLLKGLCSAAQWVDAEELMDNMTQ 405
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 130/344 (37%), Gaps = 36/344 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++I + + + +L++ ++ N ++V + G+ + +D A++
Sbjct: 201 DVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD-VDDALEL 259
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK------------------- 174
+ +G + S N +L G ++ + + + TE +
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319
Query: 175 ---------------VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+G N TYN +I CE + +L++M+ +P+
Sbjct: 320 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 379
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ LL G ++ D +++ M + G +N I LC+ +A + M
Sbjct: 380 YNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 439
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+G PN TY +I G K L+ A +LF M + G PD + + L E
Sbjct: 440 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIE 498
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
A++ R G PH +++ GL K A +++ M
Sbjct: 499 EAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 542
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y + +C +G ++ M ++PNA + L+ + + D VL M
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDALSVLDDML 194
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G A V YNI +++ CK + +A L+D M + G PN TY L+ G EG+++
Sbjct: 195 CRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVD 254
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +L ++ + GC+P + + LC + A ++ + + P+ +T ++
Sbjct: 255 DALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVI 314
Query: 365 TGLASISKVAEANELIGLMKK 385
L + +A +L+ M K
Sbjct: 315 YSLCRKGLLQQAIQLLEKMSK 335
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 36/276 (13%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P + F++ + L + QLLE++ ++ L Q N +D AM
Sbjct: 304 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN-VDGAM 362
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+M YG + + N LL G + + + + + + G P++ T+N +I
Sbjct: 363 GLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ-NGCLPDNVTFNTLIGF 421
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE--------------HKYEDVG 237
C+ G + +M K PN+ + +++G K HK +
Sbjct: 422 LCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD 481
Query: 238 KVLQMMEKC--------------------GIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
K+ Q++ +C GI+ +YN + LC+ ++E A ++
Sbjct: 482 KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAY 541
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
M+S G P+ TY LI G EG L A++L +
Sbjct: 542 MVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 38/307 (12%)
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++++++G +N+ I+ A + FEEM + G+ V +++ S N + +F E
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G+ P++ TY +I C++G + ++ EM+ K I N F L+ G+ +
Sbjct: 362 D-KGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 420
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK--------- 284
++ ++ +MEK G+ S V YN LCKL R +EAK LL M+ RG+
Sbjct: 421 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480
Query: 285 --------------------------PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
PN+ TY LI G+ K GN++ A KL + N G
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 540
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
PD Y + C G+ + ALK+ +G VP+ T ++++GL+ + EA +
Sbjct: 541 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 600
Query: 379 LIGLMKK 385
L MK+
Sbjct: 601 LYDEMKE 607
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ +D ++ F M + +V +L +L G + E +++ E G++ N
Sbjct: 206 RGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVA-AKGVKANV 264
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN I+ + + D V IL M ++ + N + LL+ GF K E+ ++ +
Sbjct: 265 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 324
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI + V VY I C+ + A L D M +G+ P+ TY LIHG K G
Sbjct: 325 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 384
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A+ L M G + + F C+ G + AL++ KG S
Sbjct: 385 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 444
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
+ +GL +++ EA L+ M +R
Sbjct: 445 IASGLCKLNRKDEAKGLLFSMVER 468
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 3/258 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H + +++G +A ++ A EM G+ + N L+ G S +E R+
Sbjct: 370 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 429
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G+E + YN + C+ +L M + + PN F L+ + KE
Sbjct: 430 MEK-KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 488
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + +V + ME+ G + YN+ I K +EA L D + +RG+ P++ T
Sbjct: 489 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 548
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LIHG +G ++ A KLF M G P+ + L + G E A K+
Sbjct: 549 SLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET 608
Query: 352 GWVPHFSTMKSLVTGLAS 369
G P + SLV L S
Sbjct: 609 GLTPDDTVYSSLVGSLHS 626
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 38/307 (12%)
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++++++G +N+ I+ A + FEEM + G+ V +++ S N + +F E
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G+ P++ TY +I C++G + ++ EM+ K I N F L+ G+ +
Sbjct: 358 D-KGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 416
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK--------- 284
++ ++ +MEK G+ S V YN LCKL R +EAK LL M+ RG+
Sbjct: 417 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 476
Query: 285 --------------------------PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
PN+ TY LI G+ K GN++ A KL + N G
Sbjct: 477 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 536
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
PD Y + C G+ + ALK+ +G VP+ T ++++GL+ + EA +
Sbjct: 537 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 596
Query: 379 LIGLMKK 385
L MK+
Sbjct: 597 LYDEMKE 603
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ +D ++ F M + +V +L +L G + E +++ E G++ N
Sbjct: 202 RGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVA-AKGVKANV 260
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN I+ + + D V IL M ++ + N + LL+ GF K E+ ++ +
Sbjct: 261 VTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEE 320
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI + V VY I C+ + A L D M +G+ P+ TY LIHG K G
Sbjct: 321 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 380
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A+ L M G + + F C+ G + AL++ KG S
Sbjct: 381 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 440
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
+ +GL +++ EA L+ M +R
Sbjct: 441 IASGLCKLNRKDEAKGLLFSMVER 464
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 3/258 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H + +++G +A ++ A EM G+ + N L+ G S +E R+
Sbjct: 366 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 425
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G+E + YN + C+ +L M + + PN F L+ + KE
Sbjct: 426 MEK-KGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEG 484
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + +V + ME+ G + YN+ I K +EA L D + +RG+ P++ T
Sbjct: 485 NFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCT 544
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LIHG +G ++ A KLF M G P+ + L + G E A K+
Sbjct: 545 SLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKET 604
Query: 352 GWVPHFSTMKSLVTGLAS 369
G P + SLV L S
Sbjct: 605 GLTPDDTVYSSLVGSLHS 622
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 138/316 (43%), Gaps = 16/316 (5%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-------QANMIDH 129
++SI ++ L + + ++LL E+ + H ++V YG + +
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMI--------DGGHQPNVVTYGSLLSGLCKMGKLKE 140
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F M G N L+ G + E R+F E + G P TYN ++
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE-KGCIPTVFTYNSLL 199
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
F G+ V S+ +M R+ PN F LL GF K + ++ M G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I+ +C + EA+ LL M+ G+ P++ +Y LI G+ K G L+ A KL
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F + G EPD++ + LC+ G+ A V + +A G P + + LV GL
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Query: 370 ISKVAEANELIGLMKK 385
++ E+ EL M K
Sbjct: 380 GERLTESCELFQAMVK 395
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN+ TY +++S C++ S+ M + PN + +L+AG + K ++
Sbjct: 47 GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L M G V Y + LCK+ + +EA L M+ RG P+ Y LI G
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+G++ A +LF M GC P + + + GE+ + + + +G VP+
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
T +L+ G + + EA+ L M+
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+YN +++ +SG VY +M PN +G LL + ++E+ V + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G + V Y+I I LC+ ++ +EA LL+ M+ G +PN+ TY L+ G K G L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A LF+ M GC PD + + + G+ A ++ + KG +P T SL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 364 VTGLASISKVAEANELIGLMKKR---------------FPKSGDMWNA 396
++G + + L M ++ F K GDM A
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA 246
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 1/253 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
DH T+ +M G + LL ++ +EE + +F G PN +Y+
Sbjct: 34 DHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM-AAQGCSPNVFSYSI 92
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C +L EM +PN +G LL+G K K ++ + M G
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG 152
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
VYN+ I K EA L + ML +G P + TY L+ GF ++G +
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M GC P+ + F C+ G+ A ++ + G P + +L+ G+
Sbjct: 213 SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGM 272
Query: 368 ASISKVAEANELI 380
S K EA L+
Sbjct: 273 CSKGKPHEAQRLL 285
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 120/297 (40%), Gaps = 4/297 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHA 130
P D + +++ + S+ +L EE+ + + F +S++ + +
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT--VFTYNSLLSGFSRKGEFGRV 211
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F++M + G ++ N LL G + E R+F E + G P+ +YN +I+
Sbjct: 212 QSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLIR 270
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C G +L EM R + P+ + +L+ G+ K + K+ + K G+
Sbjct: 271 GMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEP 330
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y+ I LC+ + A + M++ G P+ L+ G + L + +LF
Sbjct: 331 DAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELF 390
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+M C P + + Y LC+ + ++ +G+ P K ++ L
Sbjct: 391 QAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
G YN ++ L K R + + ML+ G PN TY +L+ + E A+ +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M GC P+ + + + LC+G + + A ++ + G P+ T SL++GL +
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 371 SKVAEANELIGLMKKR-FPKSGDMWNAAL 398
K+ EA +L M R P G ++N +
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM + G+ + + N L+ G S + ++F E PK G+EP++ +Y+ +I
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS-GLEPDAFSYSTII 339
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C +G + + + +M P+A L+ G + + + ++ Q M K
Sbjct: 340 DCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECV 399
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YN+ + LCK KRS++ + + RG P+++ K ++ + + + A+
Sbjct: 400 PLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 162/350 (46%), Gaps = 21/350 (6%)
Query: 40 EKKRATIARLKSESNP---FRILDICCGASLAPESPL--DRMAFSIAVSKLSQANHFNAI 94
E++R A L+ +++P R+L+ ++LA + L R + + KL A F+ +
Sbjct: 55 EQERLVTA-LREQADPEAALRMLN----SALARDDGLTPSRDVYEEIIRKLGTAGAFDLM 109
Query: 95 SQLLEELKTRPDLRQNERFH---VHSIV-LYGQANMIDHAMQTFE-EMDKYGLRQSVDAL 149
L+ E++ R+ V S + Y + + D A ++D +G++ + +
Sbjct: 110 KVLVGEMR-----REGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVY 164
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N LL + ++ +TE GIEP+ T+N VI + C + + + +L EM
Sbjct: 165 NHLLTVLAEGSKIKLLESAYTEMSS-QGIEPDVVTFNTVIDALCRARQARTAVLMLEEMS 223
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ P+ T F L+ GF +E E ++ M + G + N+ I CKL R
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVG 283
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A + ++ G +P+ T+ ++G + G+++ A K+ M GCEPD Y +
Sbjct: 284 DALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVI 343
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
LC GE E A + + G +P +T +L+ L + +++ EA +L
Sbjct: 344 NCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
F+I ++ L + + +L EE+K+ PD + ++ G+ + A+
Sbjct: 409 FNILINALCKVGDPHLAVRLFEEMKSSGCTPD-EVTYNILIDNLCSSGK---LAKALDLL 464
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+EM+ G QS N ++ G + EE + +F + V GI N+ T+N +I C
Sbjct: 465 KEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM-DVTGIGRNAITFNTLIDGLCN 523
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ ++ +M + ++PN + +L + K+ +LQ M G V
Sbjct: 524 AERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVT 583
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I LCK +R++ A LL GM +G+KP Y +I + N A LF MT
Sbjct: 584 YATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMT 643
Query: 315 NGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
G PD++ + + LC+ GG + A G++P FS+ + L GL ++
Sbjct: 644 EVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNL 700
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV N ++ A+ E+ GL +V N L+ + R+F E K G
Sbjct: 378 IVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEM-KSSG 436
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ TYN +I + C SG + +L EM + + ++ G K + E+
Sbjct: 437 CTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAE 496
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V M+ GI +N I LC +R ++A L+D M+S G++PN TY ++ +
Sbjct: 497 EVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHY 556
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K+GN+ A + +MT G E D + LC+ + ALK+ R KG P
Sbjct: 557 CKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKP 614
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 130/319 (40%), Gaps = 14/319 (4%)
Query: 74 DRMAFSIAVSKLSQANHFN----AISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MI 127
DR+ FS V+ L Q H + + +L+E PD+ + +S V+ N +
Sbjct: 300 DRVTFSTFVNGLCQNGHVDHALKVLGLMLQE-GCEPDV------YTYSTVINCLCNNGEL 352
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A +M G N L++ EE + E V G+ PN T+N
Sbjct: 353 EEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL-TVKGLSPNVYTFNI 411
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I + C+ GD + EM+ P+ + +L+ K +L+ ME G
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
YN I LCK +R EEA+ + D M GI N T+ LI G ++ A
Sbjct: 472 CPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAA 531
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L M + G +P++ + C+ G A + + A G+ T +L+ GL
Sbjct: 532 ELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591
Query: 368 ASISKVAEANELIGLMKKR 386
+ A +L+ M+ +
Sbjct: 592 CKARRTQAALKLLRGMRMK 610
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 4/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L +A +LEE+ + D+ +E + + + I+ A++
Sbjct: 195 DVVTFNTVIDALCRARQARTAVLMLEEMSS-CDVAPDETTFTTLMEGFVEEGSIEAALRL 253
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M + G + +N L+ G C L + + + I E G EP+ T++ +
Sbjct: 254 KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD--GFEPDRVTFSTFVNGL 311
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++G +L M ++ P+ + ++ + E+ ++ M G
Sbjct: 312 CQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDT 371
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I +LC + EEA L + +G+ PN+ T+ LI+ K G+ A +LF
Sbjct: 372 TTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEE 431
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + GC PD + + LC G+ AL + + G T +++ GL +
Sbjct: 432 MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRR 491
Query: 373 VAEANELIGLM 383
+ EA E+ M
Sbjct: 492 IEEAEEVFDQM 502
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 111/270 (41%), Gaps = 2/270 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ EEM + L+ G + + E R+ ++ G P S T N +I
Sbjct: 215 AVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEM-GCSPTSVTVNVLI 273
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ G + + P+ F + G + + KVL +M + G
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y+ I LC EEAK +++ M+ G P+ T+ LI E LE A L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+T G P+ Y F + LC+ G+ A+++ + G P T L+ L S
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453
Query: 370 ISKVAEANELIGLMK-KRFPKSGDMWNAAL 398
K+A+A +L+ M+ P+S +N +
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTII 483
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/210 (18%), Positives = 78/210 (37%), Gaps = 36/210 (17%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ + Y ++I+ +G + ++ EMRR+
Sbjct: 85 GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRRE------------------------- 119
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIH 295
G G+ + I S +L+ ++A L+ L G++ N + Y HL+
Sbjct: 120 ----------GHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLT 169
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ ++ + + M++ G EPD F LC+ + TA+ + + P
Sbjct: 170 VLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAP 229
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
+T +L+ G + A L M +
Sbjct: 230 DETTFTTLMEGFVEEGSIEAALRLKARMSE 259
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 127/275 (46%), Gaps = 5/275 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ FE++ YG V + + L+ G + E IF K G ++
Sbjct: 543 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM-KQQGFALDA 601
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN V+ FC+SG Y +L EM+ K + P +G ++ G K + ++ + +
Sbjct: 602 RAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEE 661
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ GI V VY+ I K+ R +EA +L+ M+ +G+ PN+ T+ L+ K
Sbjct: 662 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEE 721
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A F SM C P++Y + + LC+ +Y A + +G VP+ T +
Sbjct: 722 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 781
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
++ GLA + + +A L +RF +G +AA
Sbjct: 782 MIAGLAKVGNITDACSLF----ERFKANGGTPDAA 812
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 136/328 (41%), Gaps = 8/328 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L +A + +L +++T + ++ I+ YG A ++A +
Sbjct: 286 DDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTM-IMGYGSAGQFENAYKL 344
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+++ + G SV + N++L + +E +F K EPNS TYN +I C
Sbjct: 345 LDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK--DAEPNSSTYNIIIDMLC 402
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G Y I EM + PN +++ K K+E ++ + + G
Sbjct: 403 MAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSV 462
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I L K ++A L + ML G N Y LI F G E K+F M
Sbjct: 463 TYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEM 522
Query: 314 TNGGCEPDSYCFFMFTYFLC--QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
GC+PD + TY C + G+ E + G++P + L+ GL
Sbjct: 523 NRRGCQPD--LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAG 580
Query: 372 KVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ E + + MK++ F +NA +
Sbjct: 581 QARETSSIFHAMKQQGFALDARAYNAVV 608
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 2/252 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + L++A S + +K + + R + + + ++ +D A +
Sbjct: 565 DVRSYSILIHGLTKAGQARETSSIFHAMKQQ-GFALDARAYNAVVDGFCKSGKLDKAYEV 623
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM + +V +++ G +E +F E K GIE N Y+ +I F
Sbjct: 624 LEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEE-AKSKGIELNVIVYSSLIDGFG 682
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y IL EM +K + PN + L+ K + + Q M++ +
Sbjct: 683 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTY 742
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I I LC++++ +A M +G+ PN+ TY +I G K GN+ A LF
Sbjct: 743 TYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERF 802
Query: 314 TNGGCEPDSYCF 325
G PD+ F
Sbjct: 803 KANGGTPDAASF 814
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 115/241 (47%), Gaps = 5/241 (2%)
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKV-YGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
DA NA+L LS + ++++ E + YG+ PN + ++ + + ++
Sbjct: 115 DAYNAVL--PFLSHDLAAMEKVLEEMSVLGYGV-PNPACAD-LVSALVRTRRLDDAERVI 170
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
A MRR RP + + +L+ + + E ++L+ M++ G GV ++ +++L +
Sbjct: 171 AAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALARE 230
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
R E A AL+D + ++P++ Y I FGK GN++ A K F + + G +PD +
Sbjct: 231 GRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSY 290
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ LC+ G A ++ + VP +++ G S + A +L+ +K+
Sbjct: 291 TSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKE 350
Query: 386 R 386
R
Sbjct: 351 R 351
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 128/315 (40%), Gaps = 4/315 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A++ + A F +LL++LK R + F+ + G+ +D A+ FE
Sbjct: 324 AYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFN-SILTCLGKKRKVDEALTLFEA 382
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K S N ++ ++ EE I E G+ PN T N ++ C++
Sbjct: 383 MKKDAEPNS-STYNIIIDMLCMAGKVEEAYMIRDEMEHA-GLFPNLLTVNIMVDRLCKAK 440
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
Y + ++ PN+ + L+ G K+ +D ++ + M G + VY
Sbjct: 441 KFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYT 500
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I++ R E+ + M RG +P+L + K G++E + +F +
Sbjct: 501 SLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY 560
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G PD + + + L + G+ + A +G+ ++V G K+ +A
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620
Query: 377 NELIGLMK-KRFPKS 390
E++ MK KR P +
Sbjct: 621 YEVLEEMKVKRVPPT 635
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 6/248 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHA 130
LD A++ V ++ + ++LEE+K + R + ++ G A + +D A
Sbjct: 599 LDARAYNAVVDGFCKSGKLDKAYEVLEEMKVK---RVPPTVATYGSIIDGLAKIDRLDEA 655
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
FEE G+ +V ++L+ G +E I E K G+ PN T+N ++
Sbjct: 656 YMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMK-KGLTPNVYTWNSLMD 714
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ ++ + + M+ PN + +L+ G + KY Q M+K G+
Sbjct: 715 ALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVP 774
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I L K+ +A +L + + G P+ ++ LI G A +F
Sbjct: 775 NVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVF 834
Query: 311 ASMTNGGC 318
GC
Sbjct: 835 EETRLKGC 842
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 2/225 (0%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ L++ + + L EE K++ + N + I +G+ ID A EEM K G
Sbjct: 643 IDGLAKIDRLDEAYMLFEEAKSK-GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 701
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
L +V N+L+ + ++ E F K PN+ TY+ +I C +
Sbjct: 702 LTPNVYTWNSLMDALVKAEEINEALICFQSM-KEMKCSPNTYTYSILINGLCRVQKYNKA 760
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ EM+++ + PN + ++AG K D + + + G +N I+
Sbjct: 761 FVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEG 820
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ R+ EA + + +G + N+ L+ K LE A
Sbjct: 821 MSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 144/305 (47%), Gaps = 9/305 (2%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+ KL F A+ ++L +++ E +V ++ YG+ + A+ FE MD Y
Sbjct: 46 VIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFY 105
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
+V + NA++ + S +++ +++ + GI P+ ++ +KSFC++ +
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCKTSRPHA 164
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEH----KYEDVGKVLQMMEKCGIASGVNVYN 256
+L M + N + ++ GFY+E+ YE GK+L G++ ++ +N
Sbjct: 165 ALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA----SGVSLCLSTFN 220
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
++ LCK +E + LLD ++ RG+ PNL TY I G + G L+GA ++ +
Sbjct: 221 KLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ 280
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G +PD + Y LC+ +++ A + +G P T +L+ G V A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 377 NELIG 381
++G
Sbjct: 341 ERIVG 345
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +I C G+++ ++ E K I+PN + L+ G + +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G+ V +NI + LCK+ +A L+ M+S+G P++ T+ LIHG
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ + +E A ++ M + G +PD Y + LC+ ++E ++ + + KG P+
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 530
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ L K+ EA L+ MK +
Sbjct: 531 LFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 135/315 (42%), Gaps = 49/315 (15%)
Query: 115 VHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALL-----LGCILSKNYEEVKR 167
+++ ++ G +N MI A Q EM + GL V N L+ +GC+ S VK
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV-SDADGLVKV 451
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ ++ G P+ T+N +I + + IL M + P+ + LL G
Sbjct: 452 MISK-----GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN- 286
K K+EDV + + M + G A + +NI ++SLC+ ++ +EA LL+ M ++ + P+
Sbjct: 507 CKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDA 566
Query: 287 ---------------LD--------------------TYKHLIHGFGKEGNLEGAKKLFA 311
LD TY +IH F ++ N+ A+KLF
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + PD Y + + C+ G K M G++P +T+ ++ L
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Query: 372 KVAEANELIGLMKKR 386
+V EA +I M ++
Sbjct: 687 RVYEAAGIIHRMVQK 701
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ T+NK+++ C+ GD +L ++ ++ + PN + L + G + + +
Sbjct: 211 GVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA 270
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ + + G V YN I LCK + +EA+ L M++ G++P+ TY LI G
Sbjct: 271 VRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAG 330
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K G ++ A+++ G PD + + LC GE AL + ++ KG P+
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+L+ GL++ + EA +L M ++
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 15/342 (4%)
Query: 23 TSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPL--DRMAFSI 80
T+ L+ +EA IK +K SN IL+ A+ E L + F+I
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 81 AVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMI--DHAMQTFE 135
V+ L + + L++ + ++ PD+ +I+++G + + ++A++ +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDI------FTFNILIHGYSTQLKMENALEILD 485
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G+ V N+LL G + +E+V + + G PN T+N +++S C
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE-KGCAPNLFTFNILLESLCRY 544
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNV 254
+L EM+ KS+ P+A FG L+ GF K + + + ME+ ++S
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YNI I + + A+ L M+ R + P+ TY+ ++ GF K GN+ K M
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G P LC A + + KG VP
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 130/317 (41%), Gaps = 4/317 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +F+I + + + +A +LL + ++ N + + + + N +
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKAEGYEL 203
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M G+ + N LL + +E +++ + K G+ PN TYN I+ C
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK-RGVLPNLFTYNLFIQGLC 262
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G+ ++ + + +P+ + L+ G K K+++ L M G+
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I CK + A+ ++ + G P+ TY+ LI G EG A LF
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G +P+ + L G A ++ KG +P T LV GL + V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 374 AEANELIGLM--KKRFP 388
++A+ L+ +M K FP
Sbjct: 443 SDADGLVKVMISKGYFP 459
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+PN YN +IK G + EM K + P F +L+ G K D
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++++M G + +NI I + E A +LD ML G+ P++ TY L++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG 505
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K E + + +M GC P+ + F + LC+ + + AL + K P
Sbjct: 506 LCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
T +L+ G + A L M++ + S
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 119/306 (38%), Gaps = 38/306 (12%)
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
HV +++ + M A++ F M K G + ++ +++ +E ++ + +
Sbjct: 9 HVTAVIKCQKDPM--KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDM 66
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G Y +K++ G ++ M P + +++
Sbjct: 67 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGY 126
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
++ KV M GI V + IR++S CK R A LL+ M S+G + N+ Y
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 293 LIHGF-----------------------------------GKEGNLEGAKKLFASMTNGG 317
++ GF K+G+++ +KL + G
Sbjct: 187 VVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRG 246
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P+ + + +F LCQ GE + A+++ + +G P T +L+ GL SK EA
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAE 306
Query: 378 ELIGLM 383
+G M
Sbjct: 307 VYLGKM 312
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 151/380 (39%), Gaps = 56/380 (14%)
Query: 57 RILDICCGAS--------LAPESPLDRMAFSI---AVSKLSQANHFNAISQLLEELKTRP 105
R+L+ C A A + P R ++ + + L + F A+ L+EE++
Sbjct: 93 RVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMR--- 149
Query: 106 DLRQNERF---HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQS-------VDAL---- 149
R+N +F +V +++ + A M+ A++ +EM KYG +DAL
Sbjct: 150 --RENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNG 207
Query: 150 -----------------------NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+LL G E K + + + G EP+ YN
Sbjct: 208 SVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREA-GFEPDIVVYN 266
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + +G Y +L EMRRK PN F L+ + K E+ +V M+ C
Sbjct: 267 NLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSC 326
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y I CK + + LLD M+ +G PN TY H++ K+ LE
Sbjct: 327 GCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEEC 386
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L M GC PD + + C+ GE + ++V A G P T ++ G
Sbjct: 387 IELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHG 446
Query: 367 LASISKVAEANELIGLMKKR 386
S + EA E M R
Sbjct: 447 FLSQRCLVEACEFFKEMVGR 466
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 38/302 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A + A +EM + +V + L+ K EE R+F E G
Sbjct: 272 YAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSC-GCPA 330
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TY +I FC+ G S Y +L M ++ PN + ++A K+ + E+ +++
Sbjct: 331 DAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELM 390
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G +N+YNI I+ CKL +E + + M + G+ P LDT+ +IHGF +
Sbjct: 391 EEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQ 450
Query: 301 -------------------------------------GNLEGAKKLFASMTNGGCEPDSY 323
LE +K +++ + GC+ + Y
Sbjct: 451 RCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVY 510
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ ++ + L G + A C M G +P T L+ GL + A E+ +
Sbjct: 511 AWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKV 570
Query: 384 KK 385
+K
Sbjct: 571 RK 572
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 6/241 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D + ++ +S + + +LL+ + + + N ++H + + + ++ +
Sbjct: 329 PADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHI-PNPMTYLHIMAAHEKKEELEECI 387
Query: 132 QTFEEMDKYGLRQSVDALNALL-LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ EEM K G ++ N ++ L C L + E V R++ E + G+ P +T+ +I
Sbjct: 388 ELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGV-RVWNEM-EATGLSPGLDTFVIMIH 445
Query: 191 SFCESGDSSSVYSILAEMRRKSI--RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
F EM + + P LL + K E V + G
Sbjct: 446 GFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGC 505
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V + I I +L +EA + M+ G+ P DT+ L+ G K N + A +
Sbjct: 506 DLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAE 565
Query: 309 L 309
+
Sbjct: 566 I 566
>gi|255580552|ref|XP_002531100.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529296|gb|EEF31265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 154/358 (43%), Gaps = 36/358 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++S V KL+++ F A+ +L L+ ++R + + YG+ ++ A++
Sbjct: 79 DYPSYSALVYKLARSRRFEAVETVLGYLQDF-NVRCRDTLFIALFEHYGKVGLVAKAIRL 137
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT----------------------- 170
F EM + +++ + NALL + + + K++F
Sbjct: 138 FNEMTGFNCIRTLQSFNALLNVLVDNDRLFDAKQLFDRSSEMGFRLNSVPFNILIKGWLK 197
Query: 171 -----EFPKVYG------IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+ KV+ +EP+ TYN +I C +G+ + +M +K RPNA
Sbjct: 198 KGEWYQAGKVFDEMLERKVEPSVVTYNSLIGYLCRNGELGKAKGLFKDMIKKGKRPNAVT 257
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ LL+ G +Y++ K+L ME G + + + L K + EEAK LL M
Sbjct: 258 YALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDLGKKGKIEEAKLLLLEMK 317
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
R +P++ Y LI+ KEG + A K M GGCE ++ + M CQ GE+E
Sbjct: 318 KRRFRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRMLADGFCQVGEFE 377
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNA 396
LKV A + P T V GL + A ++ M+KR D W A
Sbjct: 378 EGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDSDGWEA 435
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE K + E K P+ YN +I C+ G + Y L EM+ NA + +
Sbjct: 307 EEAKLLLLEMKKRR-FRPDVVIYNILINHLCKEGKVAEAYKTLFEMQIGGCEANAATYRM 365
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L GF + ++E+ KVL M A + +N + L K + A +L+ M R
Sbjct: 366 LADGFCQVGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRK 425
Query: 283 IKPNLDTYKHLI 294
+ + D ++ L+
Sbjct: 426 MALDSDGWEALV 437
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 81/209 (38%), Gaps = 4/209 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +++ + L + ++L +++ R +N F V L G+ I+ A
Sbjct: 256 VTYALLMEGLCSMGEYKEAKKMLFDMEYRGCKPKNLNFGVLMNDL-GKKGKIEEAKLLLL 314
Query: 136 EMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM K R V N L+ C K E K +F ++ G E N+ TY + FC+
Sbjct: 315 EMKKRRFRPDVVIYNILINHLCKEGKVAEAYKTLFE--MQIGGCEANAATYRMLADGFCQ 372
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G+ +L M P F + G K + VL+ MEK +A +
Sbjct: 373 VGEFEEGLKVLNAMLVSRHAPRIETFNCFVVGLMKSGSIDGAFFVLEEMEKRKMALDSDG 432
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ ++ C R + L + ++ +
Sbjct: 433 WEALVRCCCSEHRGAGSVLLCESLIRHNL 461
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 5/259 (1%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++EM + ++ +V N ++ + + + + + KVYG PN +YN +I +C
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM-KVYGYSPNVVSYNTLIDGYC 269
Query: 194 ESGDSSSVY---SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ G + +Y ++L EM + PN T F +L+ GF+K+ KV + M +
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN I LC + EA + D M+S G++PNL TY LI+GF K G ++ A +F
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
S+ G P + + M C+ G+ + + +G VP T L+ GL
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 371 SKVAEANELIG-LMKKRFP 388
+ A +L L K P
Sbjct: 450 GNIEAAKKLFDQLTNKGLP 468
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 129/312 (41%), Gaps = 6/312 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
F++ ++ L + N ++E++K P++ L G M A
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY-KADAV 283
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM + + ++ N L+ G N ++F E + PN TYN +I C
Sbjct: 284 LKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLD-QDVIPNVITYNSLINGLC 342
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G + + +M ++PN + L+ GF K ++ + ++ G
Sbjct: 343 NGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTR 402
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN+ I + CKL + ++ AL + M GI P++ TY LI G + GN+E AKKLF +
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
TN G PD F + C GE A + + G P T ++ G +
Sbjct: 463 TNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNL 521
Query: 374 AEANELIGLMKK 385
A + M+K
Sbjct: 522 KAATNMRTQMEK 533
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R R + I Y + ID EEM++ G+ V N L+ G + N E K+
Sbjct: 398 RPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F + G+ P+ T++ +++ +C G+S +L EM + ++P + +++ G+
Sbjct: 458 LFDQLTN-KGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGY 515
Query: 228 YKEHKYEDVGKVLQMMEK-CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
KE + + MEK + V YN+ +Q + + E+A LL+ ML +G+ PN
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Query: 287 LDTYK 291
TY+
Sbjct: 576 RITYE 580
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ K+++ DV + + M + I V +N+ I +LCK + +A+ +++ M G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 283 IKPNLDTYKHLIHGF---GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
PN+ +Y LI G+ G G + A + M P+ F + +
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+LKV + + + +P+ T SL+ GL + K+ NE IG+ K
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKI---NEAIGMRDK 356
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 149/313 (47%), Gaps = 5/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L +A +N +LL+E+ R + NE I + Q +I+ A+
Sbjct: 351 DTISYTTVLKGLCRAERWNDAKELLKEM-VRNNCPPNEVTFNTFICILCQKGLIEQAIML 409
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M ++G V NAL+ G + + + +F P +PN+ TY ++ C
Sbjct: 410 IEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP----CKPNTITYTTLLTGLC 465
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + ++AEM + PN F +L+ F ++ ++ ++++ M + G +
Sbjct: 466 NAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLI 525
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + K SE+A LL G++S+G+ P++ T+ +I KE +E A ++F
Sbjct: 526 TYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLA 585
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G P + + LC+ E + A+ ++ G +P+ ST L+ GLA +
Sbjct: 586 QDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLL 645
Query: 374 AEANELIGLMKKR 386
EA +L+ ++ R
Sbjct: 646 KEAQDLLSMLCSR 658
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 137/340 (40%), Gaps = 32/340 (9%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD------------------------ 106
SP+D A++ V+ + H +A +L+ + PD
Sbjct: 106 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLL 165
Query: 107 ---LRQNERFHVHSIVLYGQA----NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
LR+ + +V + + +A + + AM +EM G ++ N ++ G
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 225
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
++ + + YG +P++ +Y ++K C S V + AEM K+ PN
Sbjct: 226 GRVDDARDLLNRLFS-YGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT 284
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ F + E +VLQ M + A+ + NI I S+CK R ++A L+ M
Sbjct: 285 FDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMG 344
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
S G P+ +Y ++ G + AK+L M C P+ F F LCQ G E
Sbjct: 345 SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIE 404
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A+ + G T +LV G + A EL
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALEL 444
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 15/316 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +++ + + + + F +L+E++ + P++ +++++ G + +D A
Sbjct: 178 VTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIV------TYNVIINGMCREGRVDDA 231
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ YG + + LL G SK +++V+ +F E + PN T++ +I+
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMME-KNCMPNEVTFDMLIR 290
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC G +L +M N T +++ K+ + +D K L M G
Sbjct: 291 FFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNP 350
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y ++ LC+ +R +AK LL M+ PN T+ I ++G +E A L
Sbjct: 351 DTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLI 410
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M GC + C G ++AL++ R+ K P+ T +L+TGL +
Sbjct: 411 EQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNA 467
Query: 371 SKVAEANELIGLMKKR 386
++ A EL+ M R
Sbjct: 468 ERLDAAAELVAEMLHR 483
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +PN TY ++++ C++ ++L EMR K PN + +++ G +E + +D
Sbjct: 172 GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 231
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L + G Y ++ LC KR ++ + L M+ + PN T+ LI
Sbjct: 232 RDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 291
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F + G +E A ++ MT C ++ + +C+ G + A K + G P
Sbjct: 292 FCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPD 351
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
+ +++ GL + +A EL+ M +
Sbjct: 352 TISYTTVLKGLCRAERWNDAKELLKEMVR 380
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ K+I++ C G +S +L + + L+AG+ + +
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M +A Y I+ LC R +A +LLD ML RG +PN+ TY L+
Sbjct: 130 RRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 186
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K E A + M GC P+ + + +C+ G + A + + G P
Sbjct: 187 MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPD 246
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +L+ GL + + + EL M ++
Sbjct: 247 TVSYTTLLKGLCASKRWDDVEELFAEMMEK 276
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 9/244 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQT 133
+ ++ V+ H ++ +L + +P+ ++ +L G N +D A +
Sbjct: 423 VTYNALVNGFCVQGHIDSALELFRSMPCKPNT------ITYTTLLTGLCNAERLDAAAEL 476
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM +V N +L+ K + + E +G PN TYN +
Sbjct: 477 VAEMLHRDCPPNVVTFN-VLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGIT 535
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ S +L + K + P+ F ++ KE + E+ ++ + + G+
Sbjct: 536 KDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKAL 595
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VYN + LCK + A L M+S G PN TY LI G +EG L+ A+ L + +
Sbjct: 596 VYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSML 655
Query: 314 TNGG 317
+ G
Sbjct: 656 CSRG 659
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 38/217 (17%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P P + + ++ ++ L A +A ++L+ E+ R F+V + + Q +D
Sbjct: 449 PCKP-NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV-LVNFFCQKGFLD 506
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGC-------------------------------- 156
A++ E+M ++G ++ N L G
Sbjct: 507 EAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSII 566
Query: 157 -ILSKN--YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
ILSK EE ++F + G+ P + YNK++ C+ + + LA M
Sbjct: 567 GILSKEDRVEEAIQMF-HLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGC 625
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
PN + + +L+ G +E ++ +L M+ G+ S
Sbjct: 626 MPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVS 662
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + ++E+ + G++ +V LN ++ ++ E K ++ + G+ P+ TYN
Sbjct: 235 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE-KGVFPDVVTYN 293
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I ++C G + ++ M K ++P + ++ G K KY VL M K
Sbjct: 294 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 353
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G++ YNI + C+ +A+ + D M S+G+ P+L ++ LI K G L+ A
Sbjct: 354 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 413
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K F M N G PD+ + + C+ G ALKV + +G V T +++ G
Sbjct: 414 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 473
Query: 367 LASISKVAEANELIGLMKKR--FP 388
L ++EA+EL M +R FP
Sbjct: 474 LCKEKMLSEADELFTEMTERGVFP 497
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A +EM K G+ N LL+ C + N + +RIF E P G+ P+ +++ +
Sbjct: 342 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS-QGVVPDLVSFSAL 400
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I ++G +M+ + P+ + +L+ GF + + KV M + G
Sbjct: 401 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 460
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V YN + LCK K EA L M RG+ P+ T+ LI+G+ K+GN+ A
Sbjct: 461 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 520
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M +PD + C+G E E ++ +++ P+ + L+ G
Sbjct: 521 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 580
Query: 369 SISKVAEA 376
++ V+EA
Sbjct: 581 NMGCVSEA 588
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-- 122
A LAP D + ++I + + N + + E LK R ++ E+ V +V Y
Sbjct: 423 AGLAP----DNVIYTILIGGFCR----NGV--MSEALKVRDEML--EQGCVLDVVTYNTI 470
Query: 123 -----QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+ M+ A + F EM + G+ L+ G N + +F E
Sbjct: 471 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF-EMMIQRN 529
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ TYN +I FC+ + V + +M + I PN +G+L+ G+ +
Sbjct: 530 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 589
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ M + G + + N ++ C+ + +A L ML +GI P+ TY LI+GF
Sbjct: 590 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 649
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KE N++ A L M N G PD + + + G + A + + +G P
Sbjct: 650 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 709
Query: 358 STMKSLVTGLASISKVAEA 376
ST SL+ G + + + EA
Sbjct: 710 STYTSLINGHVTQNNLKEA 728
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 45/288 (15%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL--YGQANMI 127
LD + ++ ++ L + + +L E+ R PD F+ + ++ Y + +
Sbjct: 462 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD------FYTFTTLINGYSKDGNM 515
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE------FPK--VYGIE 179
+ A+ FE M + L+ V N L+ G E+V ++ + +P YGI
Sbjct: 516 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 575
Query: 180 PN--------SETY------------------NKVIKSFCESGDSSSVYSILAEMRRKSI 213
N SE + N ++K +C +G++ L+ M K I
Sbjct: 576 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 635
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
P+ + L+ GF KE + ++ ME G+ V YN+ + + R +EA+
Sbjct: 636 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 695
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
++ M+ RG+ P+ TY LI+G + NL+ A ++ M G PD
Sbjct: 696 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 37/249 (14%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA + + F + GL S++A N+LL G + KV ++
Sbjct: 194 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV----------------KVGWVDL 237
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
E Y +V++S G +VY++ +++ K K E+ L
Sbjct: 238 AWEIYQEVVRS----GVQVNVYTL----------------NIMINALCKNQKIENTKSFL 277
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME+ G+ V YN I + C+ EEA L+D M +G+KP + TY +I+G K
Sbjct: 278 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 337
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G AK + M G PD+ + + C+ A ++ ++G VP +
Sbjct: 338 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 397
Query: 361 KSLVTGLAS 369
+L+ GL S
Sbjct: 398 SALI-GLLS 405
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 70/170 (41%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N F LL+ + + K + + ++++ G+ +N N + L K+ + A +
Sbjct: 183 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 242
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
++ G++ N+ T +I+ K +E K + M G PD + C+
Sbjct: 243 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 302
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G E A ++ + KG P T +++ GL K A ++ M K
Sbjct: 303 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 352
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 147/350 (42%), Gaps = 39/350 (11%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNE---RFHVHSIVLYGQANMIDH 129
D + + V A A LL E++ +P + F VH++ G+ +
Sbjct: 16 FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGK---VPE 72
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK-------------VY 176
AM+ + M + V N L+ G + +E +++ E + +
Sbjct: 73 AMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLIN 132
Query: 177 GIE------------------PNSETYNKVIKSFCESGDSSSVYSILAEMR-RKSIRPNA 217
G+ P+++TYN +I FC+SG+ Y L EM+ R P+
Sbjct: 133 GLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ +L+ G K ++LQ M+ + + V +N + CK + + A+ LL
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
ML G P++ TY +I G + G+++ L M + GC+PD + + LC+ G
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A ++ + + G P+ T + GL I K+ AN+L+ ++ +
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 130/298 (43%), Gaps = 17/298 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH------VHSIVLYGQANMI 127
D + F+ ++ L +A + Q+L+E++ R N + + S G+A ++
Sbjct: 88 DVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAGRSGEAVLV 146
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
M T + Y NA++ G S + E + G P++ TY+
Sbjct: 147 MQGMTTTPDTQTY---------NAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 188 VIKSFCESGDSSSVYSILAEM-RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+S + +L EM RK + F L+ G+ K + ++L M +
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A V Y+ I LC+ ++ ALL+ M+SRG KP++ TY L+ G K G + A
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+L M GC P++ + + LC+ + + A + + KG V ++L+
Sbjct: 318 CRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 6/194 (3%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D +SI ++ L ++++ +LL+E+ R D + + Y +A +D A
Sbjct: 189 SP-DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKV 188
+ M ++G V + ++ G +V + F K+ G +P+ TY +
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLC---RCGDVDKGFALLEKMVSRGCKPDVVTYTVL 304
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C++G ++ M PNA + L+ G K K + +L + G
Sbjct: 305 VTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGR 364
Query: 249 ASGVNVYNIRIQSL 262
+ V + + S+
Sbjct: 365 VTDVVAFETLLLSV 378
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 147/350 (42%), Gaps = 39/350 (11%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNE---RFHVHSIVLYGQANMIDH 129
D + + V A A LL E++ +P + F VH++ G+ +
Sbjct: 16 FDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGK---VPE 72
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK-------------VY 176
AM+ + M + V N L+ G + +E +++ E + +
Sbjct: 73 AMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLIN 132
Query: 177 GIE------------------PNSETYNKVIKSFCESGDSSSVYSILAEMR-RKSIRPNA 217
G+ P+++TYN +I FC+SG+ Y L EM+ R P+
Sbjct: 133 GLSSAGRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ +L+ G K ++LQ M+ + + V +N + CK + + A+ LL
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
ML G P++ TY +I G + G+++ L M + GC+PD + + LC+ G
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A ++ + + G P+ T + GL I K+ AN+L+ ++ +
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 17/298 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH------VHSIVLYGQANMI 127
D + F+ ++ L +A + Q+L+E++ R N + + S G+A ++
Sbjct: 88 DVVTFNTLIAGLCKAGRLDEAQQVLDEME-RSGFAANLVTYNTLINGLSSAGRSGEAVLV 146
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
M T + Y NA++ G S + E + G P++ TY+
Sbjct: 147 MQGMTTTPDTQTY---------NAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 188 VIKSFCESGDSSSVYSILAEM-RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+S + +L EM RK + F L+ G+ K + ++L M +
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A V Y+ I LC+ ++ ALL+ M+SRG KP++ TY L+ G K G + A
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+L M GC P++ + + LC+ + + A + + KG + ++L+
Sbjct: 318 CRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 6/166 (3%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D +SI ++ L ++++ +LL+E+ R D + + Y +A +D A
Sbjct: 189 SP-DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRA 247
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKV 188
+ M ++G V + ++ G +V + F K+ G +P+ TY +
Sbjct: 248 RELLSSMLEHGCAPDVVTYSTIIDGLC---RCGDVDKGFALLEKMVSRGCKPDVVTYTVL 304
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ C++G ++ M PNA + L+ G K K +
Sbjct: 305 VTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLD 350
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 144/328 (43%), Gaps = 8/328 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D ++F+I V+ L +A + ++ D R + +S+++ G +AN + A+
Sbjct: 78 DVISFNILVTGLCRAGKIETALEFFRKM----DDRCSPNVITYSVLIDGLCKANRVSQAV 133
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ E M G V L+ G + E G PN TYN ++
Sbjct: 134 ELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA-GCVPNLVTYNSLLHG 192
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C + S +++ +M + PN +G L+ G K + +D +L M G
Sbjct: 193 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 252
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ +YN+ I LCK + +E+ ALL +S GIKP++ TY +I+G + L+ A +L
Sbjct: 253 LMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 312
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + GC PD + LC+ G+ + A + G T +L+ GL
Sbjct: 313 YVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAG 372
Query: 372 KVAEANELIGLMKKR-FPKSGDMWNAAL 398
+V EA+ L+ M + P S +N+ +
Sbjct: 373 RVDEAHLLLARMVRMGTPPSTMTYNSLI 400
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 144/315 (45%), Gaps = 12/315 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
+ ++ + L + N + +L E +K+ + + ++ +L G + ++ AM
Sbjct: 11 VTYNSLIDGLCKNNEPDRAQELFEHMKS---VECSPSMVTYNTLLDGLFRTGKLERAMAL 67
Query: 134 FEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F+EM R+S D + N L+ G + E F + PN TY+ +I
Sbjct: 68 FQEMLD---RRSHDVISFNILVTGLCRAGKIETALEFFRKMDD--RCSPNVITYSVLIDG 122
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++ S +L M+ + P+ + +L+ G KE K +VL+ M G
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN + LC+ +R +A AL+ M RG PN+ TY LI G K G ++ A + A
Sbjct: 183 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 242
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G PD + M LC+ + + ++ + R +++ G P T S++ GL +
Sbjct: 243 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 302
Query: 372 KVAEANELIGLMKKR 386
++ EA L+ +K R
Sbjct: 303 RLDEACRLLLYVKSR 317
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 144/315 (45%), Gaps = 12/315 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +S+ + L +AN + +LLE +K R PD+ ++I++ G + + + A
Sbjct: 114 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDV------ITYTILVDGLCKESKVAAA 167
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ EM G ++ N+LL G ++ + + + G PN TY +I
Sbjct: 168 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGTLID 226
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ G ++LA+M K P+ + +L+ G K + ++ +L+ GI
Sbjct: 227 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 286
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y+ I LC+ R +EA LL + SRG P++ Y LI G K G ++ A L+
Sbjct: 287 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 346
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
MT GC+ D + LC+ G + A + + G P T SL+ GL +
Sbjct: 347 EVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDL 406
Query: 371 SKVAEANELIGLMKK 385
+ + EA EL+ M++
Sbjct: 407 NHLDEAIELVEEMER 421
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 37/243 (15%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE- 234
+G EPN TYN +I C++ + + M+ P+ + LL G ++ K E
Sbjct: 4 HGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLER 63
Query: 235 --------------DV-------------GKV-------LQMMEKCGIASGVNVYNIRIQ 260
DV GK+ +M ++C + V Y++ I
Sbjct: 64 AMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRC--SPNVITYSVLID 121
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK R +A LL+ M +RG P++ TY L+ G KE + A ++ M + GC P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + LC+ AL + R +G P+ T +L+ GL + +V +A ++
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241
Query: 381 GLM 383
M
Sbjct: 242 ADM 244
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+P+ TY+ VI C S +L ++ + P+ + L+ G K K ++
Sbjct: 283 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 342
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ ++M G + V Y+ I LCK R +EA LL M+ G P+ TY LI G
Sbjct: 343 FDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 402
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET-ALKVCRASMAKGWVP 355
+L+ A +L M C P + + + + +C+ ++ AL + + G +P
Sbjct: 403 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIP 462
Query: 356 HFSTMKSLVTGLASISKVAEANELI 380
T L+ GL + E L+
Sbjct: 463 DHITYSILLEGLKKSKDLHELRHLV 487
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G V YN I LCK + A+ L + M S P++ TY L+ G + G
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
LE A LF M + D F + LC+ G+ ETAL+ R M P+ T
Sbjct: 61 LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFR-KMDDRCSPNVITYSV 118
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ GL ++V++A EL+ MK R
Sbjct: 119 LIDGLCKANRVSQAVELLESMKAR 142
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 7/291 (2%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
++ EE+ R ++ N+ H +A ID A+ F M +V AL+ G
Sbjct: 248 RVFEEMPNRNEVSYNQLIHG-----LCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKG 302
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+ KN + + E + + P+ TYN +I C +G S Y +L+ M+ + + P
Sbjct: 303 -LCRKNVHKAMGLLDEMLE-RNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVP 360
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ +G + K ++ E+ ++ + + G+++ V +Y++ I CK+ + +EA L
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
+ MLS+ PN T+ LIHG GNL+ A LF M G +P Y F + + +
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+++ A K + M+ G P T + + S KV EA +++ MK+
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEE 531
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 113/281 (40%), Gaps = 39/281 (13%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + + A Q +M + GL + +LG SK+ + R+F E P
Sbjct: 199 INVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN--- 255
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
N +YN++I CE+G S+ M+ PN + L+ G +++ ++ +G
Sbjct: 256 --RNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMG 313
Query: 238 ----------------------------------KVLQMMEKCGIASGVNVYNIRIQSLC 263
++L +M++ G+ Y I LC
Sbjct: 314 LLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLC 373
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
K R EEA+ L D + G+ N+ Y LI G+ K G ++ A LF M + C P++Y
Sbjct: 374 KSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAY 433
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
F + LC G + AL + + G P T L+
Sbjct: 434 TFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILI 474
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 21/329 (6%)
Query: 12 NLKTVNYRNLATSSLLSAG--DEAAALTIKEKKRATIARL------------KSESNPFR 57
N V+Y L L AG DEA +L ++ K + K+
Sbjct: 255 NRNEVSYNQL-IHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMG 313
Query: 58 ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
+LD +L P D + ++ ++ +A H ++ +LL +K R L ++R +
Sbjct: 314 LLDEMLERNLVP----DLITYNSLIAGQCRAGHLDSAYRLLSLMKER-GLVPDQRTYGCF 368
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I ++N ++ A + F+ + + G+ +V + L+ G +E +F +
Sbjct: 369 IDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLS-KN 427
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
PN+ T+N +I C +G+ S+ +M + ++P F +L+ K+ ++D
Sbjct: 428 CSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAH 487
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K LQ M G YN I+ C + +EA+ ++ M G+ P+ TY LI +
Sbjct: 488 KCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY 547
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
GK G A + SM + CEP + F
Sbjct: 548 GKLGLTYSAFDVLKSMFDADCEPSHHTFL 576
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSS--------VYSILAEMRRKSIRPNATDFGLL 223
F K Y +E + ET + + +F + S+ V + EM + P++ + L
Sbjct: 583 FDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKL 642
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
++G K K+L M+K GI+ V+N I CKL++ EA +++ M+ G
Sbjct: 643 ISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGH 702
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
P L+ K LI G +EG E +F + G D
Sbjct: 703 SPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDD 740
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 32/170 (18%)
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT------------------ 289
++ + +N+ I CK+ +EAK + M+ G+ P+ T
Sbjct: 188 VSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAF 247
Query: 290 -------------YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
Y LIHG + G ++ A LF M + C P+ Y + LC+
Sbjct: 248 RVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN 307
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
++ A+ + + + VP T SL+ G + A L+ LMK+R
Sbjct: 308 VHK-AMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKER 356
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
++ V +F E K +G P+S+ Y K+I C+ + +L +M+++ I P+ F
Sbjct: 617 FDIVIELFEEMEK-HGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFN 675
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+++ K KY + +++ M G + + I L + +E ++ +
Sbjct: 676 AVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGC 735
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC--EPDSY 323
G + +K LI G K+G +E +LF M GC P +Y
Sbjct: 736 GYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTY 779
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 4/172 (2%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D ++ FEEM+K+G L+ G +N ++ + K GI P+ +N
Sbjct: 618 DIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQK-EGISPSEMVFNA 676
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VI C+ +I+ +M P L+ G Y+E + E V + + CG
Sbjct: 677 VISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCG 736
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL---IHG 296
+ I I + K EE L + M G + TY L +HG
Sbjct: 737 YNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHG 788
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 36/299 (12%)
Query: 117 SIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE--- 171
SI++ Y +A D A+ TF M++YG+ ++ A N+LL SKN + + IF +
Sbjct: 142 SIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNN 201
Query: 172 ---------------------FPK---VY------GIEPNSETYNKVIKSFCESGDSSSV 201
PK VY G +P+ TY ++ + C++G
Sbjct: 202 RFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEA 261
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
++ +M + +P + +L+ + + + ED MEK GI V VYN + +
Sbjct: 262 VCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTA 321
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
CK+K+ + A ++D M GI PN T+ +++ G + A ++F +M C+PD
Sbjct: 322 FCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPD 380
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
S + M C+ + E ALKV + K ++P T L+ GL +V++A L+
Sbjct: 381 SDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLL 439
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 1/220 (0%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
YG+ N +N ++ + C+S + I +M + P+A + +LL G+ +
Sbjct: 167 YGVAHNLAAFNSLLGALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPNLPK 225
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ +V M G + Y I + +LCK R EEA ++ M SRG +P Y L+H
Sbjct: 226 MREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVH 285
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+G + +E A F M G PD + C+ +++ A +V G P
Sbjct: 286 TYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISP 345
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+ T ++ L S+ K EA + M KR D +
Sbjct: 346 NSRTWNIILNTLISLGKDDEAYRVFRNMIKRCKPDSDTYT 385
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 109/225 (48%), Gaps = 12/225 (5%)
Query: 136 EMDKYGLRQSVDALNALL-----LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
E+D G+R + + +L G + + +E +R K G +Y+ V+
Sbjct: 58 ELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWARR-----QKRGGCAHTVRSYHTVVA 112
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
S + ++ ++A MR++ + N F +++ + + K+++ +ME+ G+A
Sbjct: 113 SLAKIRQYQLMWDVVAVMRKEGV-ANVETFSIIMRKYARAQKFDEAVYTFNIMERYGVAH 171
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ +N + +LCK K +A+ + D M +R P+ TY L+ G+G+ NL ++++
Sbjct: 172 NLAAFNSLLGALCKSKNVRKAQEIFDKMNNR-FSPDAKTYSILLEGWGRAPNLPKMREVY 230
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ M GC+PD + + LC+ G E A+ V + ++G P
Sbjct: 231 SDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQP 275
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 7/237 (2%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQA 124
LA D + + I V L + +++++ +R Q F ++S+++ YG
Sbjct: 234 LAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRG--CQPTTF-IYSVLVHTYGVD 290
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
I+ A+ TF +M+K G+ V NAL+ K ++ R+ + +GI PNS T
Sbjct: 291 MRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEG-HGISPNSRT 349
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N ++ + G Y + M ++ +P++ + +++ F + K E KV + M
Sbjct: 350 WNIILNTLISLGKDDEAYRVFRNMIKRC-KPDSDTYTMMIKMFCENDKIEMALKVWKYMR 408
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
++ +++ I LC +A LL+ M+ +GI+P T+ L KEG
Sbjct: 409 LKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG 465
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 5/263 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-----IEPN 181
I A +M + G R +V LL G ++ N ++ E G I+PN
Sbjct: 178 ISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPN 237
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
Y +I S C+ G + EM+ + I P+ + ++ G ++E +
Sbjct: 238 LVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ V +N+ I +LCK + EEA LL M+ RG P+ TY LI GF EG
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEG 357
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ A+ LF SM + G E D+ + + C+ G A K+ R M K +P T
Sbjct: 358 RIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYN 417
Query: 362 SLVTGLASISKVAEANELIGLMK 384
+L+TGL KV +A L G MK
Sbjct: 418 TLLTGLFREGKVRDAWNLFGEMK 440
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 136/319 (42%), Gaps = 12/319 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ F++ + L +A + LL+ + R PD + L G+ ID A
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTL-IDGFCLEGR---IDDARD 364
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F M+ G+ + N L+ G S E K+++ E I P TYN ++
Sbjct: 365 LFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREM-MCKEIMPTVITYNTLLTGL 423
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
G +++ EM+ + P + + +LL G K + + ++ +E +
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI 483
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
++N I LCK ++ E A+ L + + G++PN+ TY +IHG K G LE AK LF
Sbjct: 484 QIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLG 543
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M GC P+ F CQ E + +++ + K + P ST+ +V L+ K
Sbjct: 544 MEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603
Query: 373 VAEANELIGLMKKRFPKSG 391
E L+ FP G
Sbjct: 604 YREYLHLL----PTFPAQG 618
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+ID + F EM G+ V A ++++ G + +E K +F E G+ PN T+
Sbjct: 253 LIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVD-EGVHPNVVTF 311
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I + C++G +L M ++ P+ + L+ GF E + +D + ME
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMES 371
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
GI + YN+ I CK R EAK L M+ + I P + TY L+ G +EG +
Sbjct: 372 KGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRD 431
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF M P+S + + LC+ A+++ + P L+
Sbjct: 432 AWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLID 491
Query: 366 GLASISKVAEANEL 379
GL K+ A EL
Sbjct: 492 GLCKARKIEIAREL 505
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN+ T+ ++K C S +L +M R RPN +G LL G
Sbjct: 157 GHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLA 216
Query: 237 GKVLQMMEKCGIASGVNV------YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K+ + M GV + Y I SLCK ++ K L M RGI P++ Y
Sbjct: 217 VKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAY 276
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+IHG G EGAK LF M + G P+ F + LC+ G+ E A + + +
Sbjct: 277 SSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ 336
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+G P T +L+ G ++ +A +L M+ +
Sbjct: 337 RGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK 372
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 102/298 (34%), Gaps = 77/298 (25%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F + + + N LL K Y +V ++ + G+ P+ T N +I
Sbjct: 76 AFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRM-SLIGLAPDFITLNILI 134
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C ++L EM R+ PN F L+ G
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG----------------------- 171
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH-------------- 295
LC R EA LL M+ G +PN+ TY L++
Sbjct: 172 ------------LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKL 219
Query: 296 ---------GFG------------------KEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
GFG K+G ++ K+LF M G PD +
Sbjct: 220 HEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSI 279
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +C G +E A + + +G P+ T L+ L K+ EAN L+ LM +R
Sbjct: 280 IHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQR 337
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 74/196 (37%), Gaps = 7/196 (3%)
Query: 156 CILSKNYEEVKRIFTEFP-----KVYGIEPNSETYNKVIKSFCESGD--SSSVYSILAEM 208
C LS +E R + P P+ +KS C+SG S +S+ +
Sbjct: 24 CKLSSLFEHPHRPISPGPISLTKDTVSNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHL 83
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
P + F LL K +Y DV + + M G+A NI I C L +
Sbjct: 84 IDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKV 143
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
+ A+L ML RG PN T+ L+ G + A L M G P+ +
Sbjct: 144 DFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTL 203
Query: 329 TYFLCQGGEYETALKV 344
LC G A+K+
Sbjct: 204 LNGLCMTGNTMLAVKL 219
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 142/345 (41%), Gaps = 50/345 (14%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMI---------------D 128
L+ A ++N I LL+ + FH S++ +G AN I D
Sbjct: 117 LANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMD 176
Query: 129 HAMQTFEEMDKYGLRQSVDALNALL--------LGCILSKNYEEVKRIF----------- 169
A++ F+ YG R S + N +L +G + S E ++R
Sbjct: 177 LALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVI 236
Query: 170 ---------------TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
E K +G P+ TYN +I +C++G ++L EM K I
Sbjct: 237 NGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIH 296
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PN F +L+ GF ++ KV + M++ G+ V YN I LC + +EA L
Sbjct: 297 PNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL 356
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
D M G+KPN+ TY LI+GF K+ L+ A+++ + G P+ F +
Sbjct: 357 QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
G + A + + G P+ ST L+ G V EA +L
Sbjct: 417 AGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 144/318 (45%), Gaps = 10/318 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVL-YGQANMID 128
++ + F + ++ L + F ++E++K P + ++I+ Y +A +
Sbjct: 227 VNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV-----ITYNTIIDGYCKAGKMF 281
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A +EM + + N L+ G +N K++F E + G++PN TYN +
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR-QGLQPNVVTYNSL 340
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C +G + +M ++PN + L+ GF K+ ++ ++L + K G+
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A V +N I + K R ++A L ML G+ PN+ TY LI GF +EGN++ A+K
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M G + D + + LC+ GE A+++ G P T +L+ G
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYF 520
Query: 369 SISKVAEANELIGLMKKR 386
A + LM+K+
Sbjct: 521 REGNSTAALNVRTLMEKK 538
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 2/286 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+ + F+I + + + A ++ EE++ R L+ N + I +D A+
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQ-RQGLQPNVVTYNSLINGLCSNGKLDEALGL 356
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M GL+ +V NAL+ G K +E + + + K G+ PN T+N +I ++
Sbjct: 357 QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK-RGLAPNVITFNTLIDAYG 415
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G + + + M + PN + + L+ GF +E ++ K+ + ME G+ + +
Sbjct: 416 KAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLV 475
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + +LCK + +A LLD M G+ P+ TY LI G+ +EGN A + M
Sbjct: 476 TYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLM 535
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + + + C G+ E A ++ + KG +P+ +T
Sbjct: 536 EKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 581
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 5/259 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + FEEM + GL+ +V N+L+ G + +E + + + G++PN TYN
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGM-GLKPNVVTYN 373
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ +L ++ ++ + PN F L+ + K + +D + MM
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V+ YN I C+ +EA+ L M G+K +L TY L+ K+G A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493
Query: 307 KKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+L M G P +Y + YF + G AL V KG + T L+
Sbjct: 494 VRLLDEMFEVGLNPSHLTYNALIDGYF--REGNSTAALNVRTLMEKKGRRANIVTYNVLI 551
Query: 365 TGLASISKVAEANELIGLM 383
G + K+ EAN L+ M
Sbjct: 552 KGFCNKGKLEEANRLLNEM 570
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG+A +D A M G+ +V N L++G N +E +++ E + G++
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM-EGNGLKA 472
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN ++ + C+ G++ +L EM + P+ + L+ G+++E V
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVR 532
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+MEK G + + YN+ I+ C + EEA LL+ ML +G+ PN TY L
Sbjct: 533 TLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV + + + A + +EM+ GL+ + N L+ + R+ E +V G
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV-G 504
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ TYN +I + G+S++ ++ M +K R N + +L+ GF + K E+
Sbjct: 505 LNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 564
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
++L M + G+ Y+I L D M+ +G P++D +
Sbjct: 565 RLLNEMLEKGLIPNRTTYDI----------------LRDEMMEKGFIPDIDGH 601
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 135/322 (41%), Gaps = 10/322 (3%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM 126
LA P D M ++ V+ A +A +L+ ++ PD + ++ ++ G
Sbjct: 127 LAASGP-DVMVYNAMVAGYCGAGQLDAARRLVADMPVEPD------AYTYNTLIRGLCGR 179
Query: 127 --IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+A+ E+M + G V LL Y++ ++ E G P+ T
Sbjct: 180 GRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHD-KGCAPDIVT 238
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN V+ C+ G L + PN + ++L G + ++ED K+++ M
Sbjct: 239 YNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMA 298
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G V +N+ I LC+ E A +L+ M G PN +Y L+H F K+ +
Sbjct: 299 HKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIH 358
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M + GC PD + LC+ GE + A+++ KG P + +++
Sbjct: 359 KAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVI 418
Query: 365 TGLASISKVAEANELIGLMKKR 386
GL K EA EL+ M +
Sbjct: 419 DGLTKAGKTKEALELLDEMTSK 440
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 146/336 (43%), Gaps = 12/336 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + +++ ++ + Q + +E LK P ++IVL G A + A
Sbjct: 235 DIVTYNVVLNGICQEGR---VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAE 291
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EEM G +V N L+ E + + P+ YG PNS +YN ++ +
Sbjct: 292 KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ-YGCTPNSLSYNPLLHA 350
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ + M + P+ + LL + + + ++L ++ G +
Sbjct: 351 FCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPV 410
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I L K +++EA LLD M S+G++P++ TY + G +E +E A + F
Sbjct: 411 LISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFC 470
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G P + + LC+ E A+ + ++ G +P+ ST LV GLA
Sbjct: 471 KVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEG 530
Query: 372 KVAEANELI------GLMKKRFPKSGDMWNAALPRQ 401
V EA EL G++ K+ K G + P Q
Sbjct: 531 LVKEARELFAQLCSRGVVNKKLMKKGSIKMLDGPTQ 566
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 1/258 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM+ + M G + N L+ G + ++ + P +G +P++ YN V
Sbjct: 60 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPS-HGCKPSTVNYNTV 118
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + ++ EM R++ PN F +++ ++ + ++L+ M K G
Sbjct: 119 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 178
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + YN I LC+ + + A LL M S G KP++ TY L+ G A++
Sbjct: 179 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEE 238
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L +MT GC PD+ F FLCQ G A++V + KG P+ T ++++GLA
Sbjct: 239 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 298
Query: 369 SISKVAEANELIGLMKKR 386
+K+ +A EL M +
Sbjct: 299 KATKLDQALELFNEMGHK 316
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++PN+ TYN +I + CE G S+L +M + P+ + +LL K Y
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+++ +M G YN+ + +C ++A LL + S G KP+ Y ++ G
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
A +L M C P+ F + Y LC+ G + A+++ G +
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 358 STMKSLVTGLASISKVAEANELIGLMK 384
T +++ GL V A L+ MK
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMK 209
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 132/305 (43%), Gaps = 7/305 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFE 135
++ + L A + +L+ E+ R + NE ++V+Y + ++ A+Q E
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEM-LRENCPPNEA--TFNVVIYSLCRKGLLQQAIQLLE 171
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M K+G ++ NA++ G +N + + ++ K YG +P+ TYN ++K C +
Sbjct: 172 KMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM-KSYGCKPDIVTYNTLLKGLCSA 230
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
++ M + P+ F L+ ++ D +V + M G Y
Sbjct: 231 ARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITY 290
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K + ++A L + M +G P+ Y+ L + +E A + + +
Sbjct: 291 STIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQD 349
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P + + LC+ G+ E A+ + ++ G +P T L+ GLA + E
Sbjct: 350 SGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNE 409
Query: 376 ANELI 380
A EL+
Sbjct: 410 ARELL 414
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TYN ++++ C+ ++ MR + PN + +L+ G E +D
Sbjct: 37 GCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDA 96
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ + G YN ++ LC +R +A L+ ML PN T+ +I+
Sbjct: 97 LELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYS 156
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++G L+ A +L M+ GC + + LC+ + A+ + + G P
Sbjct: 157 LCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPD 216
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ GL S ++ +A EL+ M +
Sbjct: 217 IVTYNTLLKGLCSAARWVDAEELMDNMTQ 245
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 131/344 (38%), Gaps = 36/344 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++I + + + +L++ ++ N ++V + G+ + +D A++
Sbjct: 41 DVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGD-VDDALEL 99
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK-------------VY---- 176
+ +G + S N +L G ++ + + + TE + +Y
Sbjct: 100 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 159
Query: 177 -----------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
G N TYN +I CE + +L++M+ +P+
Sbjct: 160 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 219
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ LL G ++ D +++ M + G +N I LC+ +A + M
Sbjct: 220 YNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 279
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+G PN TY +I G K L+ A +LF M + G PD + + L E
Sbjct: 280 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIE 338
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
A++ R G PH +++ GL K A +++ M
Sbjct: 339 EAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 382
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 109/276 (39%), Gaps = 36/276 (13%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P + F++ + L + QLLE++ ++ L Q N +D AM
Sbjct: 144 PPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN-VDGAM 202
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+M YG + + N LL G + + + + + + G P++ T+N +I
Sbjct: 203 GLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQ-NGCLPDNVTFNTLIGF 261
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE--------------HKYEDVG 237
C+ G + +M K PN+ + +++G K HK +
Sbjct: 262 LCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD 321
Query: 238 KVLQMMEKC--------------------GIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
K+ Q++ +C GI+ +YN + LC+ ++E A ++
Sbjct: 322 KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAY 381
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
M+S G P+ TY LI G EG L A++L +
Sbjct: 382 MVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 417
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%)
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
++PNA + L+ + + D VL M G A V YNI +++ CK + +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L+D M + G PN TY L+ G EG+++ A +L ++ + GC+P + + L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C + A ++ + + P+ +T ++ L + +A +L+ M K
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 176
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 157/340 (46%), Gaps = 4/340 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
LKSE NP + A+ P + + + +LS+ N +S+++E ++++ + +
Sbjct: 17 LKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ-ECK 75
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKR 167
+E + I YG+ +M D A+ F+ M + +G ++ + N LL + +K + +V+
Sbjct: 76 CDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVES 135
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F F + G+ PN +TYN +IK C+ + L M ++ +P+ + ++
Sbjct: 136 LFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDL 194
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPN 286
K K +D ++ M + G+A V YNI I K K + A L D +L + PN
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN 254
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ T+ +I G K G ++ K++ M E D Y + + LC G + A V
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ T +++ G K+ E+ EL +M+ +
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 14/261 (5%)
Query: 120 LYGQANMID---------HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+Y A++ID A +EM K+G+ + NAL+ G I E
Sbjct: 429 VYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E K G P +YN +I C++G + + EM +P+ + +LL G ++
Sbjct: 489 EMGK-NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K + ++ + G+ + V ++NI I LC + + ++A ++ M R NL TY
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRAS 348
L+ GF K G+ A ++ M G +PD SY M +C+G Y A++ +
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY--AMEFFDDA 665
Query: 349 MAKGWVPHFSTMKSLVTGLAS 369
G P T LV + +
Sbjct: 666 RNHGIFPTVYTWNILVRAVVN 686
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 130/351 (37%), Gaps = 54/351 (15%)
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNER---FHVHSIVLYG--QANMIDHAMQT 133
+I +S LS+ + ++ E +K QNER + +S +++G A +D A
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMK------QNEREKDLYTYSSLIHGLCDAGNVDKAESV 312
Query: 134 FEEMDKYGLRQSVDALNALLLG---CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F E+D+ V N +L G C K E+ RI V N +YN +IK
Sbjct: 313 FNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-----NIVSYNILIK 367
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
E+G I M K + T +G+ + G V+Q +E G
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I LCK KR EEA L+ M G++ N LI G ++ L A
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM---------- 360
M GC P + + LC+ G++ A + + GW P T
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 361 -------------------------KSLVTGLASISKVAEANELIGLMKKR 386
L+ GL S+ K+ +A ++ M+ R
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +I C+ +++ EM + + N+ L+ G ++ + + L+ M
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
K G V YNI I LCK + EA A + ML G KP+L TY L+ G ++ ++
Sbjct: 492 KNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKID 551
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +L+ G E D + + LC G+ + A+ V + + T +L+
Sbjct: 552 LALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 365 TGLASISKVAEANELIGLMKK 385
G + A + G M K
Sbjct: 612 EGFFKVGDSNRATVIWGYMYK 632
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
+A +D A++ F+EM + G+ V N L+ G + K+++ ++ + + PN
Sbjct: 195 AKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPN 254
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+T+N +I + G I M++ + + L+ G + V
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+++ + V YN + C+ + +E+ L M + N+ +Y LI G + G
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENG 373
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ A ++ M G D + +F + LC G AL V + + G
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
S++ L ++ EA+ L+ M K
Sbjct: 434 SIIDCLCKKKRLEEASNLVKEMSKH 458
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 9/312 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV--LYGQANMIDHAM 131
D MA++ V+ +A +L+ ++ PD + ++++ L G+ +A+
Sbjct: 123 DVMAYNAMVAGYCVTGQLDAARRLVADMPMEPD-----SYTYNTLIRGLCGRGR-TGNAL 176
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
++M + G V LL Y++ ++ E + G P+ TYN V+
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RAKGCAPDIITYNVVVNG 235
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G L + PN + ++L G ++ED K++ M + G
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPN 295
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V +N+ I LC+ E A +LD + G PN +Y ++H F K+ ++ A
Sbjct: 296 VVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 355
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + GC PD + LC+GGE + A+++ KG P + +++ GL
Sbjct: 356 LMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 415
Query: 372 KVAEANELIGLM 383
K EA EL+ M
Sbjct: 416 KTKEALELLNEM 427
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V A NA++ G ++ + +R+ + P +EP+S TYN +I+ C G + + +L
Sbjct: 124 VMAYNAMVAGYCVTGQLDAARRLVADMP----MEPDSYTYNTLIRGLCGRGRTGNALVVL 179
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
+M R+ P+ + +LL K Y+ K+L M G A + YN+ + +C+
Sbjct: 180 DDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQE 239
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
R ++A L + S G +PN +Y ++ G E A+KL A M+ G P+ F
Sbjct: 240 GRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTF 299
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
M FLC+ G E A++V G P+ + ++ K+ A + LM
Sbjct: 300 NMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 359
Query: 386 R 386
R
Sbjct: 360 R 360
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 6/329 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + +++ V+ + Q + +E LK+ P ++IVL G A + A
Sbjct: 225 DIITYNVVVNGICQEGR---VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAE 281
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM + G +V N L+ E + + PK YG PNS +YN ++ +
Sbjct: 282 KLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPK-YGCTPNSLSYNPILHA 340
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ + + M + P+ + LL + + + ++L ++ G
Sbjct: 341 FCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 400
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I L K +++EA LL+ M+++G++P++ TY + G +E +E A + F
Sbjct: 401 LISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFC 460
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G P++ + LC+ E A+ + ++ G +P+ ST L+ GL
Sbjct: 461 KVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEG 520
Query: 372 KVAEANELIGLMKKRFPKSGDMWNAALPR 400
V EA EL+G + R S + N A R
Sbjct: 521 LVKEARELLGELCSRGVVSKGLINKAAIR 549
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 121/270 (44%), Gaps = 13/270 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ E M + AL+ S E +R+ EP+ YN
Sbjct: 75 LEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLA------ACEPDVMAYN 128
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ +C +G + ++A+M + P++ + L+ G + + VL M +
Sbjct: 129 AMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRR 185
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V Y I +++ CK ++A LLD M ++G P++ TY +++G +EG ++ A
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDA 245
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ S+ + GCEP++ + + LC +E A K+ KG+ P+ T L++
Sbjct: 246 IEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISF 305
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNA 396
L V A E++ + PK G N+
Sbjct: 306 LCRRGLVEPAMEVL----DQIPKYGCTPNS 331
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 18/310 (5%)
Query: 81 AVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVL--YGQANMIDHAMQTFE 135
A+ K+ Q ++ A+ L ++++ PD+ + SI++ + +D A F
Sbjct: 103 AIVKMGQ--YYGAVISLSKQMELAGLSPDI------YTLSILIDCFSHLQRVDLAFSVFS 154
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M K GL+ N L+ G + + F +F + G +P TY +I C+
Sbjct: 155 KMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF-EASGCQPTVYTYTTIINGLCKI 213
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G++++ + +M +PN + +L+ K+ + + M+ I+ + Y
Sbjct: 214 GETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N IQ LC +R +EA ALL+ M S I PN+ T+ L+ KEG + A+ +F +MT
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333
Query: 316 GGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G EPD +Y M+ Y L E A K+ A + KG P + L+ G ++
Sbjct: 334 MGVEPDVVTYSSLMYGYSLRM--EIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRI 391
Query: 374 AEANELIGLM 383
EA +L M
Sbjct: 392 DEAKQLFNEM 401
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 1/254 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+++ A+ F M + + N+L+ G + ++E + E + I PN T+
Sbjct: 250 LVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL-NIMPNIFTF 308
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ + C+ G S + M + P+ + L+ G+ + + K+ M
Sbjct: 309 NVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMIT 368
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G YNI I+ CK KR +EAK L + M+ +G+ P+ Y LIHG + G L
Sbjct: 369 KGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLRE 428
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A+ LF +M + G PD + + M C+ G A ++ R + P + L+
Sbjct: 429 AQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILID 488
Query: 366 GLASISKVAEANEL 379
+ + +A +L
Sbjct: 489 AMCKFGNLKDARKL 502
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 9/247 (3%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMD 138
A+ K + + + + + E+ PD+ +S ++YG + ++ A + F+ M
Sbjct: 314 AICKEGKVSEAQGVFKTMTEMGVEPDVV------TYSSLMYGYSLRMEIVEARKLFDAMI 367
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
G + + N L+ G +K +E K++F E G+ P++ YN +I C+ G
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIH-QGLTPDNVNYNTLIHGLCQLGRL 426
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ M P+ + +LL GF KE ++ ++M+ + + +YNI
Sbjct: 427 REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNIL 486
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I ++CK ++A+ L + +G+ PN+ Y +I+ KEG L+ A + F +M GC
Sbjct: 487 IDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGC 546
Query: 319 EPDSYCF 325
PD + +
Sbjct: 547 PPDEFSY 553
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F++M++ G + +V N L+ K E IF+ + K I P+ TYN +I+ C
Sbjct: 223 FKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFS-YMKAKRISPDIFTYNSLIQGLC 281
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++L EM +I PN F +L+ KE K + V + M + G+ V
Sbjct: 282 NFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVV 341
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ + EA+ L D M+++G KP+ +Y LI G+ K ++ AK+LF M
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM 401
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G PD+ + + LCQ G A + + + G +P T L+ G +
Sbjct: 402 IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461
Query: 374 AEANELIGLMKKRFPK 389
+A L +M+ + K
Sbjct: 462 GKAFRLFRVMQSTYLK 477
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 1/243 (0%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + ++ N L+ E + +F ++ G+EP+ TY+ ++ +
Sbjct: 295 EMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEM-GVEPDVVTYSSLMYGYSLR 353
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ + M K +P+A + +L+ G+ K + ++ ++ M G+ Y
Sbjct: 354 MEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNY 413
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I LC+L R EA+ L M S G P+L TY L+ GF KEG L A +LF M +
Sbjct: 414 NTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQS 473
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
+PD + + +C+ G + A K+ +G +P+ +++ L + E
Sbjct: 474 TYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDE 533
Query: 376 ANE 378
A E
Sbjct: 534 ALE 536
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A F+ M + G+ V ++L+ G L E +++F G +P++ +YN
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI-TKGCKPDAFSYN 379
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+IK +C++ + EM + + P+ ++ L+ G + + + + + M
Sbjct: 380 ILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y++ + CK +A L M S +KP++ Y LI K GNL+ A
Sbjct: 440 GNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+KLF+ + G P+ + LC+ G + AL+ R G P + ++ G
Sbjct: 500 RKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRG 559
Query: 367 LASISKVAEANELIGLMKKR 386
+ A +LIG M+ R
Sbjct: 560 FLQYKDESRAAQLIGEMRDR 579
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 5/182 (2%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM---MEKCGIASGVNVYNIRIQSLCK 264
M + P F LL+ K +Y G V+ + ME G++ + +I I
Sbjct: 85 MLHREPLPCIIQFTKLLSAIVKMGQY--YGAVISLSKQMELAGLSPDIYTLSILIDCFSH 142
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
L+R + A ++ M+ G++P+ T+ LI+G K G A + F GC+P Y
Sbjct: 143 LQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYT 202
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ LC+ GE A + + G P+ T L+ L V EA ++ MK
Sbjct: 203 YTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK 262
Query: 385 KR 386
+
Sbjct: 263 AK 264
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 142/333 (42%), Gaps = 36/333 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A+ + + L++ + + L+ ++ + L E F + + Y +AN +D A+ TF
Sbjct: 80 AYHLMIESLAKIRQYQIVWDLVSAMRKKGMLNV-ETFCIM-MRKYARANKVDEAVYTFNV 137
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT------------------------EF 172
MDKY + ++ A N LL S N + + IF
Sbjct: 138 MDKYDVVPNLAAFNGLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNL 197
Query: 173 PKVY---------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
P+ G +P+ TY ++ C++G ++ EM + RP + + +L
Sbjct: 198 PRAREVFREMVEAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVL 257
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ + EH+ ED M K GI + V YN I + CK+ + + +L M S G+
Sbjct: 258 VHTYGVEHRIEDAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGV 317
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
PN T +I +G + A ++F M CEPD+ + M C+ E E ALK
Sbjct: 318 APNSRTCNVIISSMIGQGQTDRAFRVFCRMIK-LCEPDADTYTMMIKMFCEKNELEMALK 376
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ + +K +VP T +L+ GL A+A
Sbjct: 377 IWKYMKSKQFVPSMHTFSALIKGLCEKDNAAKA 409
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 113/240 (47%), Gaps = 3/240 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + + I V L +A + ++++E+ + R + + YG + I+ A+ T
Sbjct: 215 DVVTYGIMVDVLCKAGRVDEAVEVVKEMDV-GNCRPTSFIYSVLVHTYGVEHRIEDAIDT 273
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM K G++ V A NAL+ ++ V R+ E G+ PNS T N +I S
Sbjct: 274 FLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMES-NGVAPNSRTCNVIISSMI 332
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G + + + M K P+A + +++ F ++++ E K+ + M+ ++
Sbjct: 333 GQGQTDRAFRVFCRMI-KLCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMH 391
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++ I+ LC+ + +A +++ M+ +GI+P+ T+ L KEG + K L M
Sbjct: 392 TFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKM 451
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 142/345 (41%), Gaps = 50/345 (14%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMI---------------D 128
L+ A ++N I LL+ + FH S++ +G AN I D
Sbjct: 117 LANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMD 176
Query: 129 HAMQTFEEMDKYGLRQSVDALNALL--------LGCILSKNYEEVKRIF----------- 169
A++ F+ YG R S + N +L +G + S E ++R
Sbjct: 177 LALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVI 236
Query: 170 ---------------TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
E K +G P+ TYN +I +C++G ++L EM K I
Sbjct: 237 NGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIH 296
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PN F +L+ GF ++ KV + M++ G+ V YN I LC + +EA L
Sbjct: 297 PNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL 356
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
D M G+KPN+ TY LI+GF K+ L+ A+++ + G P+ F +
Sbjct: 357 QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGK 416
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
G + A + + G P+ ST L+ G V EA +L
Sbjct: 417 AGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 13/318 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVL-YGQANMID 128
++ + F + ++ L + F ++E++K P + ++I+ Y +A +
Sbjct: 227 VNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV-----ITYNTIIDGYCKAGKMF 281
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A +EM + + N L+ G +N K++F E + G++PN TYN +
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR-QGLQPNVVTYNSL 340
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C +G + +M ++PN + L+ GF K+ ++ ++L + K G+
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A V +N I + K R ++A L ML G+ PN+ TY LI GF +EGN++ A+K
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM---AKGWVPHFSTMKSLVT 365
L M G + D + + LC+ GE A+++ KG + T L+
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIK 520
Query: 366 GLASISKVAEANELIGLM 383
G + K+ EAN L+ M
Sbjct: 521 GFCNKGKLEEANRLLNEM 538
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 5/251 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+ + F+I + + + A ++ EE++ R L+ N + I +D A+
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQ-RQGLQPNVVTYNSLINGLCSNGKLDEALGL 356
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M GL+ +V NAL+ G K +E + + + K G+ PN T+N +I ++
Sbjct: 357 QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK-RGLAPNVITFNTLIDAYG 415
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G + + + M + PN + + L+ GF +E ++ K+ + ME G+ + +
Sbjct: 416 KAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLV 475
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGML---SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YNI + +LCK + +A LLD M +G + N+ TY LI GF +G LE A +L
Sbjct: 476 TYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLL 535
Query: 311 ASMTNGGCEPD 321
M G P+
Sbjct: 536 NEMLEKGLIPN 546
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG+A +D A M G+ +V N L++G N +E +++ E + G++
Sbjct: 414 YGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM-EGNGLKA 472
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEM---RRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ TYN ++ + C+ G++ +L EM +K R N + +L+ GF + K E+
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 532
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
++L M + G+ Y+I L D M+ +G P++D +
Sbjct: 533 RLLNEMLEKGLIPNRTTYDI----------------LRDEMMEKGFIPDIDGH 569
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-- 175
IV + + + A + +EM+ GL+ + N L+ + R+ E +
Sbjct: 446 IVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEK 505
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
G N TYN +IK FC G +L EM K + PN T + +L
Sbjct: 506 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A++ + M + G + + +N L+ G LS E + + + YG +PN+ TY
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYG 330
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ C+SG ++ +L +M ++I+ +A + +++ G K ++ + ME
Sbjct: 331 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 390
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + + YNI I C R ++ LL M+ R I PN+ T+ LI F KEG L A
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 450
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++L M + G PD+ + C+ + A ++ ++KG P+ T L+ G
Sbjct: 451 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 510
Query: 367 LASISKVAEANELIGLMKKR 386
+++ + EL M R
Sbjct: 511 YCKANRIDDGLELFRKMSLR 530
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM+ +M++ ++ + ++ G + + +F E ++ GI N TYN +I
Sbjct: 345 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILI 403
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC +G +L +M ++ I PN F +L+ F KE K + ++ + M GIA
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I CK ++A ++D M+S+G PN+ T+ LI+G+ K ++ +L
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M+ G D+ + C+ G+ A ++ + +++ P+ T K L+ GL
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583
Query: 370 ISKVAEANELIGLMKK 385
+ +A E+ ++K
Sbjct: 584 NGESEKALEIFEKIEK 599
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 6/315 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
LD + +SI + L + + L E++ + ++I++ G A D
Sbjct: 359 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG---ITTNIITYNILIGGFCNAGRWDDG 415
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +M K + +V + L+ + E + + E GI P++ TY +I
Sbjct: 416 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH-RGIAPDTITYTSLID 474
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC+ ++ M K PN F +L+ G+ K ++ +D ++ + M G+ +
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN IQ C+L + AK L M+SR + PN+ TYK L+ G G E A ++F
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 594
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ E D + + + +C + + A + + KG P T ++ GL
Sbjct: 595 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 654
Query: 371 SKVAEANELIGLMKK 385
++EA L M++
Sbjct: 655 GPLSEAELLFRKMEE 669
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 2/294 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ FS+ + + +L +E+ R + + + I + + N +D A Q +
Sbjct: 432 VTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKANQMVD 490
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G ++ N L+ G + ++ +F + + G+ ++ TYN +I+ FCE
Sbjct: 491 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCEL 549
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + + EM + + PN + +LL G + E ++ + +EK + + +Y
Sbjct: 550 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 609
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
NI I +C + ++A L + +G+KP + TY +I G K+G L A+ LF M
Sbjct: 610 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 669
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
G PD + + + G+ ++K+ G+ ST+K ++ L+
Sbjct: 670 DGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 723
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EPN+ T++ +I C G S ++ M +P+ L+ G K +
Sbjct: 251 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 310
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G Y + +CK ++ A LL M R IK + Y +I G
Sbjct: 311 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 370
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G+L+ A LF M G + + + C G ++ K+ R + + P+
Sbjct: 371 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 430
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T L+ K+ EA EL
Sbjct: 431 VVTFSVLIDSFVKEGKLREAEEL 453
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ F +M +V + L +K Y+ V + + ++ GI N T +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM-ELKGIAHNLYTLSI 226
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC +S + ++ + PN F L+ G E + + +++ M + G
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ N + LC + EA L+D M+ G +PN TY +++ K G A
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L M + D+ + + LC+ G + A + KG + T L+ G
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406
Query: 368 ASISKVAEANELIGLMKKR 386
+ + + +L+ M KR
Sbjct: 407 CNAGRWDDGAKLLRDMIKR 425
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+Y + ++S + + +M P DF L + K +Y+ V + + M
Sbjct: 153 SYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 212
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E GIA + +I I C+ ++ A + + ++ G +PN T+ LI+G EG +
Sbjct: 213 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRV 272
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A +L M G +PD LC G+ A+ + + G P+ T +
Sbjct: 273 SEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPV 332
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ + + A A EL+ M++R
Sbjct: 333 LNVMCKSGQTALAMELLRKMEER 355
>gi|297847728|ref|XP_002891745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337587|gb|EFH68004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++I+++G Q D A++ F+EM K ++ + L+ G + +E ++ +
Sbjct: 155 YNILIHGCSQRGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKNLRVKEALKMKQDML 214
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
KVYG+ P Y ++K+ C+ G+ S + + E I+ ++ + L++ K +
Sbjct: 215 KVYGVRPTVHIYASLVKALCQIGELSFAFKLKDEAYEGKIKVDSAIYSTLISSLIKAGRS 274
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+V ++L+ M + G YN+ I C SE A +LD M+ +G+KP++ +Y +
Sbjct: 275 NEVSRILEEMSEKGCKPDTVTYNVLINGFCVENDSESAYRVLDEMVEKGLKPDVISYNMI 334
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ + E A LF M GC PD+ + + LC+G ++E A + + KG+
Sbjct: 335 LGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAAILDEMLFKGY 394
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAALP 399
P ++ + L K+ +++I M + +W+ +P
Sbjct: 395 KPRRDRLERFLQKLCESGKLEILSKVISSMHRGNADDAKVWSVMIP 440
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
EV RI E + G +P++ TYN +I FC DS S Y +L EM K ++P+ + ++
Sbjct: 276 EVSRILEEMSE-KGCKPDTVTYNVLINGFCVENDSESAYRVLDEMVEKGLKPDVISYNMI 334
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L ++ K+E+ + + M + G + Y I LC+ + EEA A+LD ML +G
Sbjct: 335 LGVLFRIQKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAAILDEMLFKGY 394
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
KP D + + + G LE K+ +SM G + M +C+
Sbjct: 395 KPRRDRLERFLQKLCESGKLEILSKVISSMHRGNADDAKVWSVMIPTTMCK 445
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 129/275 (46%), Gaps = 5/275 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ FE+M +G V + + L+ G + E IF + G ++
Sbjct: 537 KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQ-QGFALDA 595
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN V+ C+SG Y +L EM+ K + P +G ++ G K + ++ + +
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE 655
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ GI V +Y+ I K+ R +EA +L+ M+ +G+ PN+ T+ L+ K
Sbjct: 656 AKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEE 715
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A F SM C P++Y + + LC+ +Y A + +G +P+ T +
Sbjct: 716 IDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTT 775
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
+++GLA + + +A L +RF +G + ++A
Sbjct: 776 MISGLAKVGNITDAYSLF----ERFKTNGGIPDSA 806
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 1/253 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A ++ A + +EM+ GL ++ ++N ++ + EE RIF E G PNS
Sbjct: 398 AGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIF-ESASERGCNPNSV 456
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I + G Y + +M N + L+ F+ + ED K+ + M
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEM 516
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G + + N + + K E+ +A+ + M S G P++ +Y LIHG K G
Sbjct: 517 IRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQA 576
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+F +M+ G D+ + LC+ G+ + A +V K P +T S+
Sbjct: 577 RETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSI 636
Query: 364 VTGLASISKVAEA 376
V GLA I ++ EA
Sbjct: 637 VDGLAKIDRLDEA 649
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 133/317 (41%), Gaps = 3/317 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + L++A S + + + ++ + R + + ++ +D A +
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAM-SQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM + +V +++ G +E +F E K GIE N Y+ +I F
Sbjct: 618 LEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE-AKSKGIELNVILYSSLIDGFG 676
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y IL EM +K + PN + L+ K + ++ Q M++ +
Sbjct: 677 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTY 736
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I I LC++++ +A M +G+ PN+ TY +I G K GN+ A LF
Sbjct: 737 TYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERF 796
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PDS F + A +V + +G + T SL+ L ++
Sbjct: 797 KTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNK-TEC 855
Query: 374 AEANELIGLMKKRFPKS 390
E ++G + KS
Sbjct: 856 LEQAAIVGAVLSEIAKS 872
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 133/328 (40%), Gaps = 8/328 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ V L +A +L +++ D+ ++ I+ YG A D A +
Sbjct: 280 DDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTM-IMGYGSAERFDDAYKL 338
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E + + G SV + N++L + +E +F K +PN TYN +I C
Sbjct: 339 LERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK--DAKPNISTYNIIIDMLC 396
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G + Y I EM + PN +++ K ++ E+ ++ + + G
Sbjct: 397 MAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSV 456
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I L K + ++A L + ML G N Y LI F G E K++ M
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEM 516
Query: 314 TNGGCEPDSYCFFMFTYFLC--QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G PD + TY C + GE E + + G++P + L+ GL
Sbjct: 517 IRRGGRPD--LTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAG 574
Query: 372 KVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ E + + M ++ F +NA +
Sbjct: 575 QARETSNIFQAMSQQGFALDARAYNAVV 602
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 117/270 (43%), Gaps = 9/270 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
F+ V L++ L++E+K PD+ + I +G+A +D A + F
Sbjct: 214 FTTLVRALAREGQMEPALALVDEVKGSCLEPDIV----LYNVCIDCFGKAGSVDMAWKFF 269
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E+ +GLR + +++ + E + +F + + P + YN +I +
Sbjct: 270 HELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDV-PCAYAYNTMIMGYGS 328
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ Y +L +R + P+ F +L K+ K ++ + +M+K ++
Sbjct: 329 AERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK-DAKPNIST 387
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YNI I LC R EA + D M G+ PNL + ++ K LE A ++F S +
Sbjct: 388 YNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESAS 447
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
GC P+S + L + G+ + A ++
Sbjct: 448 ERGCNPNSVTYCSLIDGLGKKGKIDDAYRL 477
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 111/241 (46%), Gaps = 5/241 (2%)
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKV-YGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
DA NA+L LS + ++++ E + YG+ PN ++ + S + ++
Sbjct: 109 DAYNAVL--PFLSHDLAALEKVLEEMSHLGYGL-PNPAC-AALVATLVRSRRLEDAFRVI 164
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
MR RP + + +L+ + + E ++L+ M+ G V ++ +++L +
Sbjct: 165 GAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALARE 224
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ E A AL+D + ++P++ Y I FGK G+++ A K F + G PD +
Sbjct: 225 GQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSY 284
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ LC+ G A ++ A+ VP +++ G S + +A +L+ +++
Sbjct: 285 TSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRE 344
Query: 386 R 386
R
Sbjct: 345 R 345
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 4/272 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
++ + L G+ + A++ + M + G + + +N L+ G LS E + + +
Sbjct: 165 INGLCLEGR---VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
YG +PN+ TY V+ C+SG ++ +L +M ++I+ +A + +++ G K +
Sbjct: 222 -YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ + ME GI + + YNI I C R ++ LL M+ R I PN+ T+ LI
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F KEG L A++L M + G PD+ + C+ + A ++ ++KG
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T L+ G +++ + EL M R
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM+ +M++ ++ + ++ G + + +F E ++ GI N TYN +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILI 305
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC +G +L +M ++ I PN F +L+ F KE K + ++ + M GIA
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I CK ++A ++D M+S+G PN+ T+ LI+G+ K ++ +L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M+ G D+ + C+ G+ A ++ + +++ P+ T K L+ GL
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 370 ISKVAEANEL 379
+ +A E+
Sbjct: 486 NGESEKALEI 495
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 6/309 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
LD + +SI + L + + L E++ + ++I++ G A D
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG---ITTNIITYNILIGGFCNAGRWDDG 317
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +M K + +V + L+ + E + + E GI P++ TY +I
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH-RGIAPDTITYTSLID 376
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC+ ++ M K PN F +L+ G+ K ++ +D ++ + M G+ +
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN IQ C+L + AK L M+SR + PN+ TYK L+ G G E A ++F
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ E D + + + +C + + A + + KG P T ++ GL
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 371 SKVAEANEL 379
++EA L
Sbjct: 557 GPLSEAELL 565
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 115/249 (46%), Gaps = 1/249 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N +D A Q + M G ++ N L+ G + ++ +F + + G+
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-SLRGVVA 436
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I+ FCE G + + EM + + PN + +LL G + E ++
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ +EK + + +YNI I +C + ++A L + +G+KP + TY +I G K+
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+ LF M G PD + + + G+ ++K+ G+ ST+
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTI 616
Query: 361 KSLVTGLAS 369
K ++ L+
Sbjct: 617 KMVIDMLSD 625
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 10/266 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + + NH + +Q+++ + ++ P++R F++ I Y +AN ID
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT---FNIL-INGYCKANRIDDG 422
Query: 131 MQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
++ F +M G+ N L+ G C L K K +F E + PN TY ++
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGK-LNVAKELFQEMVS-RKVPPNIVTYKILL 480
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C++G+S I ++ + + + + +++ G K +D + + G+
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
GV YNI I LCK EA+ L M G P+ TY LI +G+ + KL
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQG 335
+ G D+ M L G
Sbjct: 601 IEELKRCGFSVDASTIKMVIDMLSDG 626
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EPN+ T++ +I C G S ++ M +P+ L+ G K +
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G Y + +CK ++ A LL M R IK + Y +I G
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G+L+ A LF M G + + + C G ++ K+ R + + P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T L+ K+ EA EL
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEEL 355
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ F +M +V + L +K Y+ V + + ++ GI N T +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM-ELKGIAHNLYTLSI 128
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC +S + ++ + PN F L+ G E + + +++ M + G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ N + LC + EA L+D M+ G +PN TY +++ K G A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L M + D+ + + LC+ G + A + KG + T L+ G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 368 ASISKVAEANELIGLMKKR 386
+ + + +L+ M KR
Sbjct: 309 CNAGRWDDGAKLLRDMIKR 327
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 151/347 (43%), Gaps = 39/347 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFE 135
A+ + L +A F + LL++++T+ R+ R +HS V+ YG++ +++ F
Sbjct: 218 AYFTMIDILGRAKMFTELQSLLQKMQTQG--REITRSMLHSFVMSYGRSGRFKESLEAFN 275
Query: 136 EMDKYGLRQSV--DALNALLLGCILSKNYEEVKRIF---------------TEFPKVYGI 178
M + G + A N++L+ + +K + + +F T + + +
Sbjct: 276 LMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFL 335
Query: 179 E-------------------PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+ P+ TY VI + C+ Y +L +MR PN
Sbjct: 336 KEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYT 395
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G + E+ +++ +ME+ G+ + Y I LCKL+R + AK + + L
Sbjct: 396 YNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEAL 455
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+RG+KPN TY L++G+ + L A + M C PD + L QG +
Sbjct: 456 ARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLP 515
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
AL++ KG+ +F T+ L GLA + +A+ MK R
Sbjct: 516 DALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDR 562
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 110/258 (42%), Gaps = 1/258 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
MI+ A ++M + G ++ NAL+ G + EE + T + G+ PN TY
Sbjct: 373 MIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQG-GVPPNIYTY 431
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ C+ + E + ++PN + LL G+ + + + +L+ M +
Sbjct: 432 TILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQ 491
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
Y IQ L + + +A + D M ++G N DT L G + GN +
Sbjct: 492 NDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKD 551
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A + M + G + +++ + L GE E A + + KG+ P+ +T +++
Sbjct: 552 ASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIK 611
Query: 366 GLASISKVAEANELIGLM 383
G ++ +A+ ++ M
Sbjct: 612 GFCRQGRLDDADAMLNFM 629
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 108/260 (41%), Gaps = 9/260 (3%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLL 154
L+E+ P++ + ++I+ +G + +D A + F E GL+ + N LL
Sbjct: 418 LMEQGGVPPNI------YTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLN 471
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
G E I E + P+ TY +I+ + + EM K
Sbjct: 472 GYCRGSRLIEAMDILKEMHQ-NDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYD 530
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
N +L G + ++D + M+ G A + Y + I L EEA+AL
Sbjct: 531 VNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQAL 590
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M+++G PNL TY +I GF ++G L+ A + M G PD+ + +
Sbjct: 591 LYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHN 650
Query: 335 GGEYETALKVCRASMAKGWV 354
G + A ++ ++ +G V
Sbjct: 651 QGRTQDADQLYATALERGVV 670
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 95 SQLLEELKTRPDLRQNE--RFHV-HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDAL 149
S+L+E + ++ QN+ HV ++ ++ G Q N + A++ +EM+ G + D L
Sbjct: 477 SRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTL 536
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L G N+++ IF K G ++ Y I +G+ ++L EM
Sbjct: 537 NILARGLARVGNHKDAS-IFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMI 595
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K PN T + ++ GF ++ + +D +L M + GI YNI I+ R++
Sbjct: 596 NKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQ 655
Query: 270 EAKALLDGMLSRGIKPN 286
+A L L RG+ N
Sbjct: 656 DADQLYATALERGVVLN 672
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 112/266 (42%), Gaps = 23/266 (8%)
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
L + + R F K G + N++ Y +I + + + S+L +M+ +
Sbjct: 192 LQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITR 251
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV--NVYNIRIQSLCKLKRSEEAKALL 275
+ + + + ++++ + +M++ G G+ YN + SL K K+ + A+ L
Sbjct: 252 SMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLF 311
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M++ G+ N TY +I F + +E A KL M PD + + LC+
Sbjct: 312 AQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKR 371
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK----------- 384
E A V + G P+ T +L+ GL ++ + EA EL+ LM+
Sbjct: 372 KMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTY 431
Query: 385 ----------KRFPKSGDMWNAALPR 400
+R ++ +M+N AL R
Sbjct: 432 TILTHGLCKLRRLDRAKEMFNEALAR 457
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 6/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+ + ++ +++L F ++ + ++ L + ++ L+G + I+ AM
Sbjct: 371 NTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDD-IEKAMVV 429
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M K G +V N L++ L + Y F K EP+ TY ++I FC
Sbjct: 430 FNKMLKDGPSPTVVTYNTLIVEN-LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFC 488
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G S S EM + I PN + ++ G+ KE K + + + ME+ G ++ +
Sbjct: 489 KGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIE 548
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I L K R EA+ M +G++PN TY LI+G K A K+F M
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
C P+++ + Y LCQ G+ + A ++ G P T +LV+GL +
Sbjct: 609 EKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEPTIDTYSTLVSGLCREGRS 664
Query: 374 AEANELIGLMKKR 386
EA++L+ MK++
Sbjct: 665 NEASQLVENMKEK 677
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 140/313 (44%), Gaps = 6/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S + ++ + E+ + + N+ + I Y + ID A+
Sbjct: 476 DERTYCELISGFCKGGKLDSATSFFYEM-LKCGISPNQWTYTAMIDGYCKEGKIDVALSL 534
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FE M++ G S++ NA++ G + E ++ + + G++PN+ TY +I C
Sbjct: 535 FERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE-QGLQPNTITYTSLINGLC 593
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ ++ + I EM +K+ PNA + L+ G +E K + ++ + G ++
Sbjct: 594 KNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTID 649
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ + LC+ RS EA L++ M +G+ P+++ Y L+ K ++ A ++F M
Sbjct: 650 TYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM 709
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G +P + + + LC E AL + ++ + K W LV GL
Sbjct: 710 AVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDS 769
Query: 374 AEANELIGLMKKR 386
+ + LM+ R
Sbjct: 770 DLCMKFLYLMESR 782
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 120/269 (44%), Gaps = 5/269 (1%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE-- 179
G+ +M+ A + ++ G++ S+ N ++ IL K +V+ F K++ +
Sbjct: 173 GKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMI--NILCKK-GKVQEAVLVFNKIFQFDLC 229
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P++ TY +I C + + + M + PN+ + L+ G E + + +
Sbjct: 230 PDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDM 289
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M + GI V Y + I SLC + R ++A L+ M +G P++ TY +I G +
Sbjct: 290 LEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFR 349
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G +E A ++ M G P++ + LC G + ALK+ G + + T
Sbjct: 350 AGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQT 409
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFP 388
++ GL + + +A + M K P
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGP 438
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ M K G SV A++ G + E ++ + K G+ PN+ TYN
Sbjct: 318 VDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLK-EGLVPNTVTYN 376
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G I M NA + ++ G + E V M K
Sbjct: 377 ALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKD 436
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + V YN I K A L M +P+ TY LI GF K G L+ A
Sbjct: 437 GPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSA 496
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
F M G P+ + + C+ G+ + AL + G T ++++G
Sbjct: 497 TSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISG 556
Query: 367 LASISKVAEANELIGLMKKR 386
L+ ++ +EA + M ++
Sbjct: 557 LSKGNRFSEAEKFCAKMTEQ 576
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 111/274 (40%), Gaps = 5/274 (1%)
Query: 115 VHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTE 171
+S ++ G N I AM EEM + G+ +V + C + + + + + +
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G P+ +TY +I +G + +M ++ + PN + L+ E
Sbjct: 329 GKK--GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEG 386
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++ K+ ME G + YN I+ L + E+A + + ML G P + TY
Sbjct: 387 RFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYN 446
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI K G L A + M CEPD + C+GG+ ++A +
Sbjct: 447 TLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC 506
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P+ T +++ G K+ A L M++
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE 540
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 112/261 (42%), Gaps = 6/261 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++ +S LS+ N F+ + ++ T L+ N + I + + A + F E
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKM-TEQGLQPNTITYTSLINGLCKNTATNLAFKIFHE 607
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M+K + +L+ G + +R+ TE G EP +TY+ ++ C G
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL-TE----NGCEPTIDTYSTLVSGLCREG 662
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+ ++ M+ K + P+ + LL K K + ++ +M G + +Y
Sbjct: 663 RSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYK 722
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ I +LC + R+EEA + +L + +L + L+ G +EG+ + K M +
Sbjct: 723 VLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESR 782
Query: 317 GCEPDSYCFFMFTYFLCQGGE 337
C P + + + L + G+
Sbjct: 783 NCTPSLHTYIILARELSKVGK 803
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 6/268 (2%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF--PKVYGIE--- 179
N D A + FE M S+ N LL G + E +F E + + ++
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187
Query: 180 -PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN TY+ +I C++ S +L M+ + P+ + +L+ G KE K +
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
VL+ M G + YN + LC+ +R +A AL+ M RG PN+ TY LI G
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G ++ A + A M + G PD + M LC+ + + ++ + R +++ G P
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 367
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T S++ GL +++ EA L+ +K R
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKSR 395
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 4/306 (1%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
++L+ D R + +S+++ G +AN + A++ E M G V L+
Sbjct: 174 EMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILV 233
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G + E G PN TYN ++ C + S +++ +M +
Sbjct: 234 DGLCKESKVAAAWEVLREMLDA-GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGC 292
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PN +G L+ G K + +D +L M G + +YN+ I LCK + +E+ A
Sbjct: 293 TPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIA 352
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL +S GIKP++ TY +I+G + L+ A +L + + GC PD + LC
Sbjct: 353 LLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLC 412
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGD 392
+ G+ + A + G T +L+ GL +V EA+ L+ M + P S
Sbjct: 413 KAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTM 472
Query: 393 MWNAAL 398
+N+ +
Sbjct: 473 TYNSLI 478
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 12/315 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +S+ + L +AN + +LLE +K R PD+ ++I++ G + + + A
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDV------ITYTILVDGLCKESKVAAA 245
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ EM G ++ N+LL G ++ + + + G PN TY +I
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDM-TCRGCTPNVVTYGTLID 304
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ G ++LA+M K P+ + +L+ G K + ++ +L+ GI
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y+ I LC+ R +EA LL + SRG P++ Y LI G K G ++ A L+
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M GC+ D + LC+ G + A + + G P T SL+ GL +
Sbjct: 425 EVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDL 484
Query: 371 SKVAEANELIGLMKK 385
+ + EA EL+ M++
Sbjct: 485 NHLDEAIELVEEMER 499
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 7/215 (3%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+P+ TY +++ FC G+ EMR K++ PN +L+ G K + D +
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M+ GI + +Y + L K KR ++A A+L M G +PN+ TY LI G
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA-------SMAK 351
K + A++LF M + C P + L + G+ E A+ + + M
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T L+ GL ++V++A EL+ MK R
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKAR 220
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 8/267 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A + F+EM L +V + L+ G +K + R F + GI ++ Y
Sbjct: 25 IDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAM-QGSGIVADTVIYT 83
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + +IL EMR PN + L+ G K ++ + ++ + M+
Sbjct: 84 ALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSV 143
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-------GIKPNLDTYKHLIHGFGK 299
+ + YN + L + + E A AL ML R PN+ TY LI G K
Sbjct: 144 ECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCK 203
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ A +L SM GC PD + + LC+ + A +V R + G VP+ T
Sbjct: 204 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 263
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL +V++A L+ M R
Sbjct: 264 YNSLLHGLCRARRVSDALALMRDMTCR 290
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 5/205 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+P+ TY+ VI C S +L ++ + P+ + L+ G K K ++
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ ++M G + V Y+ I LCK R +EA LL M+ G P+ TY LI G
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV-----CRASMAK 351
+L+ A +L M C P + + + + +C+ ++A+ + R A
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G SL+ GL +VAEA
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEA 565
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 133/324 (41%), Gaps = 9/324 (2%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMID 128
SP D + ++I V L + + A ++L E+ D ++ +L+G +A +
Sbjct: 223 SP-DVITYTILVDGLCKESKVAAAWEVLREML---DAGCVPNLVTYNSLLHGLCRARRVS 278
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A+ +M G +V L+ G C + + + + K G P+ YN
Sbjct: 279 DALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDK--GGTPDLMIYNM 336
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C++ ++L I+P+ + ++ G + ++ ++ ++L ++ G
Sbjct: 337 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 396
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V +Y+ I LCK + +EA L + M G ++ TY LI G K G ++ A
Sbjct: 397 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAH 456
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L A M G P + + LC + A+++ P T L+ G+
Sbjct: 457 LLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGM 516
Query: 368 ASISKVAEANELIGLMKKRFPKSG 391
+ +V A L+ K R +G
Sbjct: 517 CRMERVDSAVVLLEQAKARCVAAG 540
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 104/263 (39%), Gaps = 6/263 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ +D ++ G++ V ++++ G S +E R+ + K G P+
Sbjct: 343 KADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL-YVKSRGCPPDV 401
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y+ +I C++G + + M + + L+ G K + ++ +L
Sbjct: 402 ILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G YN I+ LC L +EA L++ M P+ TY LIHG +
Sbjct: 462 MVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER 521
Query: 303 LEGAKKLFAS-----MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++ A L + GG D+ + LC+ G AL + + G +P
Sbjct: 522 VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDH 581
Query: 358 STMKSLVTGLASISKVAEANELI 380
T L+ GL + E L+
Sbjct: 582 ITYSILLEGLKKSKDLHELRHLV 604
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 17/247 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMID 128
D + +S + L ++N + +LL +K+R PD+ ++S ++ G +A +D
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDV------ILYSTLIDGLCKAGKVD 418
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A +E M G V + L+ G + +E + ++ G P++ TYN +
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM-GTPPSTMTYNSL 477
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCG 247
IK C+ ++ EM R + P+A + +L+ G + + + +L Q +C
Sbjct: 478 IKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCV 537
Query: 248 IASGVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
A G + Y+ I LCK R EA M+ G+ P+ TY L+ G K +L
Sbjct: 538 AAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDL 597
Query: 304 EGAKKLF 310
+ L
Sbjct: 598 HELRHLV 604
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 172/397 (43%), Gaps = 51/397 (12%)
Query: 24 SSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVS 83
+S+L G T RA AR + E + D GA AP + + ++ V+
Sbjct: 143 ASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAP----NVVTYNTLVA 198
Query: 84 KLSQANHFNAISQL---LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMD 138
+A +A +L + E RP L + V+ G +A ++ A + F+EM
Sbjct: 199 AFCRAGEVDAAERLVGVMREGGVRPSLV------TFNTVVNGLCKAGRMEDARKMFDEMA 252
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+ GL + N L+ G + E +F E + G+ P+ T+ +I + C +G+
Sbjct: 253 REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQ-KGVVPDVVTFTSLIHAMCRAGNL 311
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+++ +MR + +R N F L+ GF + +D ++ M +C I V YN+
Sbjct: 312 ERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVL 371
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL--------- 309
I CKL R +EA+ L+ M ++G+KP++ TY ++ G+ K G+ + A +L
Sbjct: 372 INGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGV 431
Query: 310 ------FASMTNGGCE--------------------PDSYCFFMFTYFLCQGGEYETALK 343
++S+ G CE PD + + C+ G + AL
Sbjct: 432 VPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALS 491
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + KG +P T L+ GL+ ++ EA L+
Sbjct: 492 LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 108/257 (42%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + M + G+ +V N L+ EE + + + G PN TYN ++
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC +G+ + ++ MR +RP+ F ++ G K + ED K+ M + G+
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT 257
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + CK EA A+ M +G+ P++ T+ LIH + GNLE A L
Sbjct: 258 PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + F C+ G + AL + P L+ G
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377
Query: 370 ISKVAEANELIGLMKKR 386
+ ++ EA ELI M+ +
Sbjct: 378 LGRMDEARELIHEMEAK 394
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 133/281 (47%), Gaps = 3/281 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + + +A + L+ +++ R LR NE I + + +D A+
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRER-GLRMNEFTFTALIDGFCRNGFLDDALLA 352
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM + ++ SV N L+ G +E + + E + G++P+ TY+ ++ +C
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM-EAKGMKPDVVTYSTILSGYC 411
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD+ S + + +M +K + P+A + L+ G +E + D ++ + M + G+
Sbjct: 412 KIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEF 471
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK ++A +L D M+ +G+ P++ TY LI G K + A++L +
Sbjct: 472 TYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
PD+ + + C+ E+++ + + + KG +
Sbjct: 532 YYEDPVPDNIKYEALMH-CCRTAEFKSVVALLKGFSMKGLM 571
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G P+L Y ++ + +L A++L ASM G P+ Y + + LC G+ E A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 342 LKVCRASM-AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L V M G P+ T +LV +V A L+G+M++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMRE 218
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 139/289 (48%), Gaps = 13/289 (4%)
Query: 101 LKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL 158
+K PDL +SI++ + + ++H TF + K G R + +N LL G
Sbjct: 88 IKVTPDL------CTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCD 141
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC---ESGDSSSVYSILAEMRRKSIRP 215
+K E I + G P+ +YN ++K FC + ++ + ++A+ + +S P
Sbjct: 142 AKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201
Query: 216 NATDFGLLLAGFYKEHKYEDVGKV-LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
N + ++ GF+ E + + + L+MM++ GI V Y I LCK + + A+ +
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDR-GIQPNVVTYTTVIDGLCKAQVVDRAEGV 260
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
M+ +G+KP+ DTY LIHG+ G + ++ M+ G +PD Y + +LC
Sbjct: 261 FQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCN 320
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G A + + KG P+ + L+ G A+ ++E ++L+ LM
Sbjct: 321 NGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++D A F++M G++ D N L+ G + ++EV R+ E +G++P+
Sbjct: 250 KAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHGLKPDC 308
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++ C +G M RK I+PN +G+L+ G+ + ++ +L +
Sbjct: 309 YTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNL 368
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G++ +++NI + K +EA + + M +G+ P++ + LI K G
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A F M N G P+ + F Y LC ++E A + + +G P +
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 363 LVTGLASISKVAEANELIGLMKK 385
++ L + +V +A LI LM++
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMER 511
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+PN TY VI C++ + +M K ++P+ + L+ G+ K+++V
Sbjct: 233 GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEV 292
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ M G+ Y + LC R EA+ D M+ +GIKPN+ Y LIHG
Sbjct: 293 VRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHG 352
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCF-FMFTYF------------------------ 331
+ +G L L M G PD + F +FT +
Sbjct: 353 YATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 332 ----------LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
LC+ G + A+ M +G P+ SLV GL ++ K +A E
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEF 470
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M++ G R V + L+ G L +E + V G++P+ TYN ++
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV-GLKPDEWTYNTLL 560
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C +G Y + EM R I P + +L G + ++ + ++ M G
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +YNI + L K +EA L + S+ + + T+ +I K G E A L
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
FA++++ G PD + + + L + G E + A G P+ + +LV L
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLH 740
Query: 370 ISKVAEA 376
+ A
Sbjct: 741 RGDITRA 747
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E IF + K G+ P+ + +I + C+ G +M + + PN F
Sbjct: 395 DEAMHIFNKM-KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K+E + M GI V +N + +LC + +A+ L+D M G
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+P++ +Y LI G G ++ A K M + G +PD + + + C+ G + A
Sbjct: 514 TRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
V R + G P T +++ GL + + +EA EL M SG WN
Sbjct: 574 GVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNM----ITSGKQWN 622
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F +M G+ ++ N+L+ G +E+ K + E GI P+ +N
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN-QGIRPDVVFFN 487
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + C G ++ M R RP+ + L+ G + ++ K L +M
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ YN + C+ R ++A + ML GI P + TY ++HG A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+L+ +M G + + + + + L + + A K+ ++ +K + +T ++
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667
Query: 367 L 367
L
Sbjct: 668 L 668
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 97/255 (38%), Gaps = 2/255 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETYNKVIKS 191
+ M + G V + N LL G K EE + G PN +Y VI
Sbjct: 153 IKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVING 212
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
F G Y++ EM + I+PN + ++ G K + V Q M G+
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPD 272
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I + + +E +L+ M + G+KP+ TY L++ G A+ F
Sbjct: 273 NDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFD 332
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
SM G +P+ + + + G + + G P + T A +
Sbjct: 333 SMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKA 392
Query: 372 KVAEANELIGLMKKR 386
+ EA + MK++
Sbjct: 393 MIDEAMHIFNKMKQQ 407
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 138/316 (43%), Gaps = 16/316 (5%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-------QANMIDH 129
++SI ++ L + + ++LL E+ + H ++V YG + +
Sbjct: 89 SYSILIAGLCRGQKVDEAAELLNEMI--------DGGHQPNVVTYGSLLSGLCKMGKLKE 140
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F M G N L+ G + E R+F E + G P TYN ++
Sbjct: 141 AVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLE-KGCIPTVFTYNSLL 199
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
F G+ V S+ +M R+ PN F LL GF K + ++ M G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN ++ +C + EA+ LL M+ G+ P++ +Y LI G+ K G L+ A KL
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKL 319
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F + G EPD++ + LC+ G+ A V + +A G P + + LV GL
Sbjct: 320 FYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCR 379
Query: 370 ISKVAEANELIGLMKK 385
++ E+ EL M K
Sbjct: 380 GERLTESCELFQAMVK 395
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN+ TY +++S C++ S+ M + PN + +L+AG + K ++
Sbjct: 47 GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEA 106
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L M G V Y + LCK+ + +EA L M+ RG P+ Y LI G
Sbjct: 107 AELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDG 166
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+G++ A +LF M GC P + + + GE+ + + + +G VP+
Sbjct: 167 FSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
T +L+ G + + EA+ L M+
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMR 254
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 15/228 (6%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+YN +++ +SG VY +M PN +G LL + ++E+ V + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G + V Y+I I LC+ ++ +EA LL+ M+ G +PN+ TY L+ G K G L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A LF+ M GC PD + + + G+ A ++ + KG +P T SL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 364 VTGLASISKVAEANELIGLMKKR---------------FPKSGDMWNA 396
++G + + L M ++ F K GDM A
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEA 246
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 1/253 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
DH T+ +M G + LL ++ +EE + +F G PN +Y+
Sbjct: 34 DHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM-AAQGCSPNVFSYSI 92
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C +L EM +PN +G LL+G K K ++ + M G
Sbjct: 93 LIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRG 152
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
VYN+ I K EA L + ML +G P + TY L+ GF ++G +
Sbjct: 153 CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQ 212
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M GC P+ + F C+ G+ A ++ + G P + +L+ G+
Sbjct: 213 SLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGM 272
Query: 368 ASISKVAEANELI 380
S K EA L+
Sbjct: 273 CSKGKPHEAQRLL 285
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 120/297 (40%), Gaps = 4/297 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHA 130
P D + +++ + S+ +L EE+ + + F +S++ + +
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPT--VFTYNSLLSGFSRKGEFGRV 211
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F++M + G ++ N LL G + E R+F E + G P+ +YN +++
Sbjct: 212 QSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLMR 270
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C G +L EM R + P+ + +L+ G+ K + K+ + K G+
Sbjct: 271 GMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEP 330
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y+ I LC+ + A + M++ G P+ L+ G + L + +LF
Sbjct: 331 DAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELF 390
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+M C P + + Y LC+ + ++ +G+ P K ++ L
Sbjct: 391 QAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM + G+ + + N L+ G S + ++F E PK G+EP++ +Y+ +I
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS-GLEPDAFSYSTII 339
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C +G + + + +M P+A L+ G + + + ++ Q M K
Sbjct: 340 DCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECV 399
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YN+ + LCK KRS++ + + RG P+++ K ++ + + E A+
Sbjct: 400 PLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
G YN ++ L K R + + ML G PN TY +L+ + E A+ +F
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M GC P+ + + + LC+G + + A ++ + G P+ T SL++GL +
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 371 SKVAEANELIGLMKKR-FPKSGDMWNAAL 398
K+ EA +L M R P G ++N +
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLI 164
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
++ M D A + F+EMD +G+ V + L+ G EE +I+ E + GI+P+
Sbjct: 238 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM-RHRGIKPDL 296
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+++ +I F G + L EMR + P+ + +++ GF + D +V
Sbjct: 297 VSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE 356
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M CG V YN + LCK +R +A+ LL+ M RG+ P+L T+ LIHG+ EG
Sbjct: 357 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 416
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+ A +LF +M N PD + +C+ G+ + A + ++ P+ T
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 476
Query: 363 LVTGLASISKVAEA 376
L+ +V +A
Sbjct: 477 LIDSHCEKGQVEDA 490
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 12/306 (3%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQ 109
S+ R+ D G P D + ++ ++ L + LL E++ R PDL
Sbjct: 348 SDALRVRDEMVGCGCLP----DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 403
Query: 110 NERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+H + G+ +D A+Q F+ M LR + N L+ G + ++ ++
Sbjct: 404 FTTL-IHGYCIEGK---LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 459
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ I PN TY+ +I S CE G + L EM K I PN + ++ G+ +
Sbjct: 460 DDM-HSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 518
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
K LQ M ++ + YN I K + +A LL+ M ++P++ T
Sbjct: 519 SGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVT 578
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y LI+GF GN++ A +F M G EPD Y + G + A ++ +
Sbjct: 579 YNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 638
Query: 350 AKGWVP 355
+G+ P
Sbjct: 639 QRGFAP 644
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 112/239 (46%), Gaps = 1/239 (0%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
LN ++ + +++V + +E K + P+ T+N ++ + +GD+ + +++
Sbjct: 158 TLNIMVHNYCKALEFDKVDAVISEMEK-RCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 216
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M K ++P + +L G + ++ +V + M+ G+A V + I I C++
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
EEA + M RGIKP+L ++ LI F + G ++ A M G PD + M
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G AL+V + G +P T +L+ GL ++ +A L+ M++R
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 127/315 (40%), Gaps = 8/315 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D +F+I + + ++ +E++ R PDL I L+ + +DHA
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL----IGLFARRGKMDHA 315
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M EM +GL ++ G + + R+ E G P+ TYN ++
Sbjct: 316 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLN 374
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ +L EMR + + P+ F L+ G+ E K + ++ M +
Sbjct: 375 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 434
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN I +C+ ++A L D M SR I PN TY LI ++G +E A
Sbjct: 435 DIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 494
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N G P+ + C+ G K + M P T +L+ G
Sbjct: 495 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 554
Query: 371 SKVAEANELIGLMKK 385
K+ +A +L+ +M+K
Sbjct: 555 DKMHDAFKLLNMMEK 569
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 1/253 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM + G+ + L+ G + ++ ++F + P+ TYN +I C
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN-QRLRPDIVTYNTLIDGMC 447
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
GD + +M + I PN + +L+ ++ + ED L M GI +
Sbjct: 448 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 507
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I+ C+ + + L M+ + P+L TY LIHG+ KE + A KL M
Sbjct: 508 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 567
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+PD + M G + A + AKG P T S++ G +
Sbjct: 568 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 627
Query: 374 AEANELIGLMKKR 386
EA +L M +R
Sbjct: 628 KEAFQLHDEMLQR 640
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 128/254 (50%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ ++++ + G+ ++ N+L+ G +++ + +R+ K++G+EPN+ TY ++
Sbjct: 545 AVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTI-KLHGLEPNAVTYTTLM 603
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+CE G+ S+ +L+EM+ K+I P + +++ G K+ K ++ ++L+ M+ G+
Sbjct: 604 NVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLT 663
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN IQ+ CK + +A L D ML ++P TY LI+GF G+L+ A L
Sbjct: 664 PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNL 723
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
S+ N + Y + C G+ + A+ R + KG+ +++ L
Sbjct: 724 LVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCK 783
Query: 370 ISKVAEANELIGLM 383
V EA +M
Sbjct: 784 RCLVTEAKYFFCMM 797
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 123/273 (45%), Gaps = 3/273 (1%)
Query: 110 NERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
N +++++ G + ++ A++ ++EM +G + S+ + LL S+ + +
Sbjct: 383 NPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFK 442
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F E + G+ P+ TY+ +I C+ G+ + +M I PN+ G +L G
Sbjct: 443 LFCEM-EANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGL 501
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
++ K + ++ + +YNI I K + EA L + +GI P +
Sbjct: 502 CEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTI 561
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ L++GF L A++L ++ G EP++ + C+ G ++ L++
Sbjct: 562 VTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSE 621
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
AK P T ++ GL K+ E+ +L+
Sbjct: 622 MKAKAIGPTHITYTVVIKGLCKQWKLQESCQLL 654
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 1/221 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A F M K+GL + N L+ G ++ + E + + +G+EP
Sbjct: 291 YCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMEN-HGLEP 349
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN + K F G + ++I+ +M K PN + +L+ G + E+ K+
Sbjct: 350 DMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLY 409
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M G + + + SLCK ++ + A L M + G++P+L TY LIHG K+
Sbjct: 410 KEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQ 469
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G ++ A L+ M + P+S LC+ G+ A
Sbjct: 470 GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQA 510
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 8/297 (2%)
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKY 140
S L H N + + E+K Q+E + SIV+ G + + A+ F++ +
Sbjct: 219 SLLYNLRHSNIMWDVYNEIKVSGT-PQSE--YTSSIVVDGLCRQSRFQDAVLFFQDTEGK 275
Query: 141 GLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
+ SV + N ++ C L + +V + F +G+ P++ +YN +I C +G
Sbjct: 276 EFQPSVVSFNTIMSRYCKLG--FVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMG 333
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ +M + P+ + +L GF ++Q M G + Y + I
Sbjct: 334 EALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLI 393
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
C++ EEA L M+S G + ++ + L+ K ++ A KLF M G
Sbjct: 394 CGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLR 453
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
PD + + LC+ GE + A+ + + +P+ +++ GL K+++A
Sbjct: 454 PDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQA 510
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 20/268 (7%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
R+LD L P + + ++ ++ + + ++ +LL E+K + +
Sbjct: 582 RLLDTIKLHGLEPNA----VTYTTLMNVYCEEGNMQSLLELLSEMKAKA---IGPTHITY 634
Query: 117 SIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
++V+ G + + Q E+MD GL + N ++ +++ + +++ +
Sbjct: 635 TVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKM-L 693
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
++ +EP S TYN +I FC GD ++L ++ + + N + ++ K H +
Sbjct: 694 LHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTII----KAHCAK 749
Query: 235 -DVGKVL----QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
DV K + QM+EK G + Y+ I LCK EAK MLS G+ P+ D
Sbjct: 750 GDVDKAVVYFRQMVEK-GFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDL 808
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGG 317
++ L++ F + G+L +L A M G
Sbjct: 809 FEVLLNAFHQCGHLNSEFELLAEMIKSG 836
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/317 (18%), Positives = 125/317 (39%), Gaps = 8/317 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDH 129
L ++ ++ + L ++ + +L E++ RPDL +H + G+ +
Sbjct: 419 LSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTL-IHGLCKQGE---VQQ 474
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ +E+M + + A+L+G + K R++ ++ + + YN +I
Sbjct: 475 AILLYEKMCSNRIIPNSLIHGAILMG-LCEKGKISQARMYFDYLITSNLSLDIILYNIMI 533
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + G++ + ++ K I P F L+ GF K ++L ++ G+
Sbjct: 534 DGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLE 593
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y + C+ + LL M ++ I P TY +I G K+ L+ + +L
Sbjct: 594 PNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQL 653
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G PD + C+ + A ++ + P T L+ G
Sbjct: 654 LEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCV 713
Query: 370 ISKVAEANELIGLMKKR 386
+ +A+ L+ ++ R
Sbjct: 714 YGDLKDADNLLVSLQNR 730
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 76/178 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +YN +I++FC++ D + + +M ++ P + + +L+ GF +D
Sbjct: 661 GLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDA 720
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L ++ + Y I++ C ++A M+ +G + ++ Y +I
Sbjct: 721 DNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGR 780
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K + AK F M + G PD F + Q G + ++ + GW+
Sbjct: 781 LCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 2/182 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TYN +I S C G +L EM N + L+ GF K K E+
Sbjct: 309 GCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEA 368
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ ME G++ YN I LCK +R +EA L+D M+ G+KP+ TY ++
Sbjct: 369 EEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTY 428
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-- 354
F +EG+++ A + +MT+ GCEPD + LC+ G E A ++ R+ KG V
Sbjct: 429 FCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLT 488
Query: 355 PH 356
PH
Sbjct: 489 PH 490
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 2/261 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ EM+ G ++V N L+ G +K EE + IF + ++ G+ NS TYN
Sbjct: 330 LQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQM-EIQGLSRNSVTYN 388
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+S ++ +M + ++P+ + +L F +E + ++Q M
Sbjct: 389 TLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSN 448
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y I LCK R E A LL + +G+ Y +I K + A
Sbjct: 449 GCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEA 508
Query: 307 KKLFASMTNGGCEPDSYCF-FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
+LF M G PD++ + +F GG A+ + KG++P FS+ L
Sbjct: 509 MRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAE 568
Query: 366 GLASISKVAEANELIGLMKKR 386
GL S+S +L+ L+ ++
Sbjct: 569 GLCSLSMEDTLIKLVDLVMEK 589
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 7/263 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A + F++M+ GL ++ N L+ G S+ +E ++ + + G++P+ TYN
Sbjct: 365 IEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMI-MEGLKPDKFTYN 423
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC GD I+ M P+ +G L+ G K + E ++L+ ++
Sbjct: 424 SMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLK 483
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG- 305
G+ + YN IQ+L K KR++EA L M +G P+ TYK + G G G
Sbjct: 484 GMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGE 543
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK-SLV 364
A M G P+ F+M LC +T +K+ M K +FS + ++
Sbjct: 544 AVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKA---NFSQNEVVMI 600
Query: 365 TGLASISKVAEA-NELIGLMKKR 386
G I K +A L GL+ R
Sbjct: 601 RGFLKIRKFQDALATLGGLLDSR 623
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 144/341 (42%), Gaps = 25/341 (7%)
Query: 45 TIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR 104
T+ R E+ R+L AS P + + + KL + FN++ +L+E+K
Sbjct: 60 TLRRQNDETAALRLLS---WASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGL 116
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD-KYGLRQSVDALNALLLGCILSKNYE 163
D + + + I Y + + + + E M+ ++GL N LL + +
Sbjct: 117 -DCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLK 175
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
V+ + + GI+P+ T+N +IK+ C++ ++ EM + P+ F L
Sbjct: 176 LVENVHSTMVS-KGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTL 234
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF +E + +V + M G N+ + CK R EEA + +D M + G
Sbjct: 235 MQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEG- 293
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
KH + A +L+ M N GC+PD + + M LC G+ + AL
Sbjct: 294 -------KHTM-----------AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALG 335
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ R G + T +L+ G K+ EA E+ M+
Sbjct: 336 LLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQME 376
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A +M+ + V N ++ ++ ++ +F E + GI PN TY+
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYS 224
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G S +L++M K I PN F L+ F KE K+ + K+ M K
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + YN I C R ++AK + + M+S+ P+LDTY LI GF K +E
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M++ G D+ + L G+ + A KV + ++ G P T L+ G
Sbjct: 345 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 367 LASISKVAEANELIGLMKK 385
L + K+ +A E+ M+K
Sbjct: 405 LCNNGKLEKALEVFDYMQK 423
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I A+ ++M + G R L+ G L E + + G +P
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQP 148
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY V+ C+ GD +++L +M I + F ++ K +D +
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME GI V Y+ I LC R +A LL M+ + I PNL T+ LI F KE
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A+KL M +PD + + C + A ++ ++K P T
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V + EL M R
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHR 354
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 140/323 (43%), Gaps = 10/323 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + F+ + L + H + L +E++T RP++ + + YG+ + A
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL-ISCLCSYGRWS---DA 239
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q +M + + ++ NAL+ + + E +++ + K I+P+ TYN +I
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFTYNSLIN 298
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + M K P+ + L+ GF K + ED ++ + M G+
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y IQ L + A+ + M+S G+ P++ TY L+ G G LE A ++F
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + D Y + +C+ G+ + + + KG P+ T ++++GL S
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 371 SKVAEANELIGLMKKR--FPKSG 391
+ EA L+ MK+ P SG
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSG 501
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI N TYN +I FC S ++L +M + P+ LL G+ + D
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G + I L ++ EA AL+D M+ RG +PNL TY +++G
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G+++ A L M E D F LC+ + AL + + KG P+
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T SL++ L S + ++A++L+ M ++
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 8/312 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ +S +S L ++ SQLL ++ K P+L F+ + ++ A +
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT---FNALIDAFVKEGKFVE-AEK 276
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++M K + + N+L+ G + ++ K++F EF P+ +TYN +IK F
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGF 335
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+S + EM + + + + L+ G + + ++ KV + M G+ +
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+I + LC + E+A + D M IK ++ Y +I G K G ++ LF S
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
++ G +P+ + LC + A + + G +P T +L+
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 373 VAEANELIGLMK 384
A + ELI M+
Sbjct: 516 KAASAELIREMR 527
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D + E+M + G+ ++ N +L+ C ++ + G EP+ T +
Sbjct: 27 DLVISLGEKMQRLGISHNLYTYN-ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 85
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ +C S +++ +M RP+ F L+ G + +K + ++ M + G
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y + + LCK + A LL+ M + I+ ++ + +I K +++ A
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M G P+ + LC G + A ++ + K P+ T +L+
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 368 ASISKVAEANELIGLMKKR 386
K EA +L M KR
Sbjct: 266 VKEGKFVEAEKLHDDMIKR 284
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 84/207 (40%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ +NK++ + + V S+ +M+R I N + +L+ F + + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M K G + + + C KR +A AL+D M+ G +P+ T+ LIHG
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
A L M GC+P+ + + LC+ G+ + A + A
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+++ L V +A L M+ +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETK 214
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 116 HSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI+L G N ++ A++ F+ M K ++ + ++ G + ++ +F
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL- 456
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G++PN TYN +I C Y++L +M+ P++ + L+ ++
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 516
Query: 234 EDVGKVLQMMEKC 246
++++ M C
Sbjct: 517 AASAELIREMRSC 529
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D M +SI + L ++ + ++ + +++ + + I +A +D
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 132 QTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
F + G++ +V N ++ G +L + Y +K++ + P P+S TYN
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-----PDSGTYNT 505
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+I++ GD ++ ++ EMR +A+ GL+
Sbjct: 506 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + ++E+ + G++ +V LN ++ ++ E K ++ + G+ P+ TYN
Sbjct: 78 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE-KGVFPDVVTYN 136
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I ++C G + ++ M K ++P + ++ G K KY VL M K
Sbjct: 137 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 196
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G++ YNI + C+ +A+ + D M S+G+ P+L ++ LI K G L+ A
Sbjct: 197 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 256
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K F M N G PD+ + + C+ G ALKV + +G V T +++ G
Sbjct: 257 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNG 316
Query: 367 LASISKVAEANELIGLMKKR--FP 388
L ++EA+EL M +R FP
Sbjct: 317 LCKEKMLSEADELFTEMTERGVFP 340
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A +EM K G+ N LL+ C + N + +RIF E P G+ P+ +++ +
Sbjct: 185 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS-QGVVPDLVSFSAL 243
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I ++G +M+ + P+ + +L+ GF + + KV M + G
Sbjct: 244 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 303
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V YN + LCK K EA L M RG+ P+ T+ LI+G+ K+GN+ A
Sbjct: 304 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 363
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M +PD + C+G E E ++ +++ P+ + L+ G
Sbjct: 364 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 423
Query: 369 SISKVAEA 376
++ V+EA
Sbjct: 424 NMGCVSEA 431
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +++ A + + M GL+ V NA++ G + Y K + E K+ G+ P
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI-GMSP 200
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN ++ C + + I EM + + P+ F L+ K + K
Sbjct: 201 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 260
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ G+A +Y I I C+ EA + D ML +G ++ TY +++G KE
Sbjct: 261 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 320
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L A +LF MT G PD Y F + G A+ + + + P T
Sbjct: 321 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 380
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G S++ + NEL M R
Sbjct: 381 NTLIDGFCKGSEMEKVNELWNDMISR 406
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 20/319 (6%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-- 122
A LAP D + ++I + + N + + E LK R ++ E+ V +V Y
Sbjct: 266 AGLAP----DNVIYTILIGGFCR----NGV--MSEALKVRDEML--EQGCVLDVVTYNTI 313
Query: 123 -----QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+ M+ A + F EM + G+ L+ G N + +F E
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF-EMMIQRN 372
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ TYN +I FC+ + V + +M + I PN +G+L+ G+ +
Sbjct: 373 LKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAF 432
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ M + G + + N ++ C+ + +A L ML +GI P+ TY LI+GF
Sbjct: 433 RLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGF 492
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KE N++ A L M N G PD + + + G + A + + +G P
Sbjct: 493 IKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDR 552
Query: 358 STMKSLVTGLASISKVAEA 376
ST SL+ G + + + EA
Sbjct: 553 STYTSLINGHVTQNNLKEA 571
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 45/289 (15%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL--YGQANMI 127
LD + ++ ++ L + + +L E+ R PD F+ + ++ Y + +
Sbjct: 305 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD------FYTFTTLINGYSKDGNM 358
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF--PKVY--------- 176
+ A+ FE M + L+ V N L+ G E+V ++ + ++Y
Sbjct: 359 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 418
Query: 177 -----------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G E T N ++K +C +G++ L+ M K I
Sbjct: 419 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 478
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
P+ + L+ GF KE + ++ ME G+ V YN+ + + R +EA+
Sbjct: 479 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 538
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
++ M+ RG+ P+ TY LI+G + NL+ A ++ M G PD
Sbjct: 539 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ + G + I E+ R ++ N +++ K K E+ L ME+
Sbjct: 66 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ V YN I + C+ EEA L+D M +G+KP + TY +I+G K G
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
AK + M G PD+ + + C+ A ++ ++G VP + +L+
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI- 244
Query: 366 GLAS 369
GL S
Sbjct: 245 GLLS 248
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 70/170 (41%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N F LL+ + + K + + ++++ G+ +N N + L K+ + A +
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
++ G++ N+ T +I+ K +E K + M G PD + C+
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G E A ++ + KG P T +++ GL K A ++ M K
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 195
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 128/275 (46%), Gaps = 5/275 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ FE++ YG V + + L+ G + E IF K G ++
Sbjct: 36 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM-KQRGFALDA 94
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN V+ FC+SG Y L EM+ K + P +G ++ G K + ++ + +
Sbjct: 95 RAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEE 154
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ GI V VY+ I K+ R +EA +L+ M+ +G+ PN+ T+ L+ K
Sbjct: 155 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEE 214
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A F SM C P++Y + + LC+ +Y A + +G VP+ T +
Sbjct: 215 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 274
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
+++GLA + + +A L +RF +G + +AA
Sbjct: 275 MISGLAKVGNITDACSLF----ERFKANGGIPDAA 305
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 2/252 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + L++A S + +K R + R + + + ++ +D A +
Sbjct: 58 DVRSYSILIHGLTKAGQARETSSIFHAMKQR-GFALDARAYNAVVDGFCKSGKVDKAYEA 116
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM + +V +++ G +E +F E K GIE N Y+ +I F
Sbjct: 117 LEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEE-AKSKGIELNVIVYSSLIDGFG 175
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y IL EM +K + PN + L+ K + + Q M++ +
Sbjct: 176 KVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTY 235
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I I LC++++ +A M +G+ PN+ TY +I G K GN+ A LF
Sbjct: 236 TYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERF 295
Query: 314 TNGGCEPDSYCF 325
G PD+ F
Sbjct: 296 KANGGIPDAASF 307
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 1/204 (0%)
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + I EM R+ +P+ T + +K E + + ++ G V Y
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+I I L K ++ E ++ M RG + Y ++ GF K G ++ A + M
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
P + L + + A + + +KG + SL+ G + ++ E
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 182
Query: 376 ANELI-GLMKKRFPKSGDMWNAAL 398
A ++ +MKK + WN+ +
Sbjct: 183 AYLILEEMMKKGLAPNVYTWNSLM 206
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 117/241 (48%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F+EM G+ +V L+ G L +E ++ T+ KVY + PN+ Y
Sbjct: 166 LDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYIYA 225
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+IK C++G+ S + + EM R I + + L++G +K + E+ V + M++
Sbjct: 226 SLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKER 285
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G YN+ I CK K E A LLD M+ +G KP++ +Y ++ +EG A
Sbjct: 286 GYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEA 345
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M GC PD + + C G +++ A + + KG+VP +++ V
Sbjct: 346 NDLFEDMPRRGCAPDVVSYRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNR 405
Query: 367 L 367
L
Sbjct: 406 L 406
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 149/312 (47%), Gaps = 3/312 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+++ + ++KL +A FN + ++L +LK E I YG+A + ++A++
Sbjct: 46 LSYDLIITKLGRAKMFNEMQEILAQLKEETLFTPKEALFCDIINFYGRARLPENALKLLV 105
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
E+ + ++++V + N+LL ++ K++++++ +F K+ + ++ TYN +I+ FC S
Sbjct: 106 ELPSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIEKLG--KADACTYNLLIRGFCAS 163
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV-LQMMEKCGIASGVNV 254
G + EM + + PN FG L+ GF + ++ K+ M++ + +
Sbjct: 164 GRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYRVYPNAYI 223
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I+ +CK A L M+ I+ + Y LI G K G E A ++ M
Sbjct: 224 YASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMK 283
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +PD+ + + C+ ++E A ++ + KG P + ++ L K
Sbjct: 284 ERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRG 343
Query: 375 EANELIGLMKKR 386
EAN+L M +R
Sbjct: 344 EANDLFEDMPRR 355
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 3/252 (1%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVK-RIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+MD +G+ +V +LN +L+ C+ N+ + I + K+ GI P + T+N +I C
Sbjct: 113 QMDLFGVTHNVYSLN-VLINCLCRLNHVDFAVSILGKMFKL-GIHPTASTFNALINGLCN 170
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G + EM R+ PN + ++ G K V + ME+ G V
Sbjct: 171 EGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVT 230
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I SLCK + +A L ML RGI PN+ TY ++HGF G L A +LF M
Sbjct: 231 YNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV 290
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
PD+ + LC+ G A V KG P+ ST +L+ G +
Sbjct: 291 GRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMN 350
Query: 375 EANELIGLMKKR 386
EA ++ +M ++
Sbjct: 351 EAKKVFEIMIRQ 362
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+++ AM+ EM G+ +V N ++ G CIL + E R+F E + P++ T
Sbjct: 243 LVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ-LNEATRLFKEMVG-RDVMPDTVT 300
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
++ C+ G S + M K + PN + + L+ G+ + + KV ++M
Sbjct: 301 LTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMI 360
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G A GV+ YNI I CK +R +EAK+LL M + + P+ TY L+ G + G +
Sbjct: 361 RQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPK 420
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +F M + G P+ + + C+ G + ALK+ ++ K P+ L+
Sbjct: 421 EALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILI 480
Query: 365 TGLASISKVAEANEL 379
G+ K+ A EL
Sbjct: 481 EGMFIAGKLEVAKEL 495
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 5/261 (1%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +D A+ +M K G+ + NAL+ G +E +F E + G EPN +
Sbjct: 137 NHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR-RGHEPNVIS 195
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I C++G++S + +M + +P+ + ++ K+ D + L M
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEML 255
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI V YN + C L + EA L M+ R + P+ T L+ G KEG +
Sbjct: 256 DRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVS 315
Query: 305 GAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A+ +F +MT G EP+ +Y M Y C A KV + +G P +
Sbjct: 316 EARLVFETMTEKGVEPNISTYNALMDGY--CLQRLMNEAKKVFEIMIRQGCAPGVHSYNI 373
Query: 363 LVTGLASISKVAEANELIGLM 383
L+ G ++ EA L+ M
Sbjct: 374 LINGFCKSRRMDEAKSLLAEM 394
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 117/257 (45%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F++M++ G + V N ++ + + +E GI PN TYN ++
Sbjct: 212 AVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLD-RGIPPNVFTYNCMV 270
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G + + EM + + P+ +L+ G KE + V + M + G+
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVE 330
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
++ YN + C + EAK + + M+ +G P + +Y LI+GF K ++ AK L
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M + PD+ + LCQ G + AL + + + G +P+ T L+ G
Sbjct: 391 LAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCK 450
Query: 370 ISKVAEANELIGLMKKR 386
+ EA +L+ M+++
Sbjct: 451 HGHLDEALKLLKSMQEK 467
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 2/263 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M+ A FE M + G+ ++ NAL+ G L + E K++F E G P +Y
Sbjct: 313 MVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF-EIMIRQGCAPGVHSY 371
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I FC+S S+LAEM K++ P+ + L+ G + + ++ + + M
Sbjct: 372 NILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCS 431
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ + Y+I + CK +EA LL M + ++PN+ + LI G G LE
Sbjct: 432 YGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEV 491
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
AK+LF+ + G P + + L + G + A + R G++P+ + ++
Sbjct: 492 AKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQ 551
Query: 366 GLASISKVAEANELIG-LMKKRF 387
G + A LI ++ KRF
Sbjct: 552 GFLQNQDSSTAIRLIDEMVGKRF 574
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 1/244 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +++ A + FE M + G V + N L+ G S+ +E K + E + P
Sbjct: 343 YCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYH-KALNP 401
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TY+ +++ C+ G +I EM + PN + +LL GF K ++ K+L
Sbjct: 402 DTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLL 461
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ + + + I I+ + + E AK L + + GI+P + TY +I G KE
Sbjct: 462 KSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKE 521
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A LF M + G P+S + + Q + TA+++ + K + + ST
Sbjct: 522 GLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTF 581
Query: 361 KSLV 364
+ L+
Sbjct: 582 QMLL 585
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M R + RP+ +FG L F K+ +Y V + M+ G+ V N+ I LC+L
Sbjct: 79 MVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNH 138
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+ A ++L M GI P T+ LI+G EG ++ A +LF M G EP+ +
Sbjct: 139 VDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNT 198
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ G A+ V + G P T +++ L V +A E + M R
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDR 257
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ + K + SF + S+V S+ +M + N +L+ + + + +
Sbjct: 86 PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M K GI + +N I LC + +EA L + M+ RG +PN+ +Y +I+G K
Sbjct: 146 LGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCK 205
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
GN A +F M GC+PD + LC+ A++ + +G P+ T
Sbjct: 206 TGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFT 265
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+V G + ++ EA L M R
Sbjct: 266 YNCMVHGFCILGQLNEATRLFKEMVGR 292
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 2/309 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+ I ++ L Q LLEE+ + L+ N + I+ + + I A ++ E M
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGHISLACESLENM 516
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K + + N+L+ G EE + + + K G+ P+ TY+ +I +C++ +
Sbjct: 517 TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQK-RGLVPDEFTYSGLIHGYCKTRN 575
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+L +M ++PNA + LL G++K + +E V +LQ M G ++Y I
Sbjct: 576 LEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGI 635
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I++L + + E A +L + G+ P+L Y LI G K ++E A L M G
Sbjct: 636 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG 695
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
EP C+ C+ G+ A V + +AKG +P+ T +L+ G + +A
Sbjct: 696 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAF 755
Query: 378 ELIGLMKKR 386
+L M R
Sbjct: 756 DLYKDMLDR 764
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 140/346 (40%), Gaps = 35/346 (10%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D +S + +A F+A ++ EE++ R D NE + I ++ ++ A
Sbjct: 242 PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRR-DCAMNEVTYNVMISGLCRSGAVEEAF 300
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PKVY--------- 176
EEM YGL AL+ G +E K + E P V
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360
Query: 177 -------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
G++PN Y+ +I+ C+ G +L EM + RP+
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ L+ G ++ + + ++L M GI Y I I LC+ S+EA LL+
Sbjct: 421 FTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEE 480
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M+S G+KPN Y LI G KEG++ A + +MT PD +C+ L G
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
E A + +G VP T L+ G + +A++L+ M
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQM 586
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ++ A Q ++M GL+ + D LL G S ++E+V I G +P
Sbjct: 570 YCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGS-GDKP 628
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ Y VI++ S + + +L E+ + + P+ + L++G K E +L
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLL 688
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M K G+ G+ YN I C+ A+ + D +L++G+ PN TY LI G K
Sbjct: 689 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKN 748
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++ A L+ M + G PD++ + + + E AL + +G+ H S
Sbjct: 749 GDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLF 807
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+LV G ++ E +L+ +M R
Sbjct: 808 STLVRGFCKRGRLQETEKLLHVMMDR 833
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 120/250 (48%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A + + ++ K GL + L+ G ++N E+ ++ + G++PN++TY
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNS-GLKPNADTYT 599
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++ + +S D V SIL M +P+ +G+++ + E VL +EK
Sbjct: 600 DLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKN 659
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ +++Y+ I LCK+ E+A LLD M G++P + Y LI GF + G++ A
Sbjct: 660 GLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRA 719
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F S+ G P+ + C+ G+ A + + + +G P L TG
Sbjct: 720 RNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATG 779
Query: 367 LASISKVAEA 376
+ + + +A
Sbjct: 780 CSDAADLEQA 789
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A D A + FEEM + + N ++ G S EE F E YG+ P++
Sbjct: 257 KARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFG-FKEEMVDYGLSPDA 315
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++ C+ G ++L EM ++PN + L+ GF KE K + +L
Sbjct: 316 FTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNE 375
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G+ +Y+ I+ LCK+ + A LL+ M+ G +P+ TY L+ G + +
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYD 435
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+GA +L M N G P++Y + + LCQ GE + A + +++G P+
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 495
Query: 363 LVTGLASISKVAEANELIGLMKK 385
L+ G + ++ A E + M K
Sbjct: 496 LIIGHSKEGHISLACESLENMTK 518
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 122/297 (41%), Gaps = 36/297 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM K G R + L+ G + + + E + GI PN+ TY +I
Sbjct: 404 ASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM-RNSGILPNAYTYGIMI 462
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C++G+S ++L EM + ++PNA + L+ G KE + L+ M K +
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVL 522
Query: 250 SGVNVYNIRIQSL-----------------------------------CKLKRSEEAKAL 274
+ YN I+ L CK + E+A L
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L ML+ G+KPN DTY L+ G+ K + E + SM G +PD++ + + L +
Sbjct: 583 LQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSR 642
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
E A V G VP SL++GL ++ + +A L+ M K + G
Sbjct: 643 SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPG 699
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 1/246 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + A Q M GL + N LL + + E V ++ F + GI P
Sbjct: 185 YKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKL-KGFMEGAGIPP 243
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ +++ C++ D + + EMRR+ N + ++++G + E+
Sbjct: 244 DVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK 303
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M G++ Y + LCK R +EAKALLD M G+KPN+ Y L+ GF KE
Sbjct: 304 EEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKE 363
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A + M + G +P+ + LC+ G+ A K+ + G P T
Sbjct: 364 GKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423
Query: 361 KSLVTG 366
L+ G
Sbjct: 424 HPLMQG 429
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 13/245 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMID-- 128
D + I + LS++ + +L E++ PDL H++S ++ G M D
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDL------HIYSSLISGLCKMADME 682
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ +EM K GL + NAL+ G S + + +F G+ PN TY +
Sbjct: 683 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSI-LAKGLLPNCVTYTAL 741
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C++GD + + + +M + I P+A + +L G E + + M G
Sbjct: 742 IDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY 801
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A V++++ ++ CK R +E + LL M+ R I PN T +++I FGK G L A +
Sbjct: 802 AH-VSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHR 860
Query: 309 LFASM 313
+FA +
Sbjct: 861 VFAEL 865
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 7/238 (2%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQ 144
++N +S +L+ + D N H++ IV+ ++ ++ A E++K GL
Sbjct: 607 KSNDHEKVSSILQSMLGSGDKPDN---HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 663
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
+ ++L+ G + E+ + E K G+EP YN +I FC SGD S ++
Sbjct: 664 DLHIYSSLISGLCKMADMEKAVGLLDEMAK-EGLEPGIVCYNALIDGFCRSGDISRARNV 722
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+ K + PN + L+ G K D + + M GIA VYN+
Sbjct: 723 FDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSD 782
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
E+A L + M +RG ++ + L+ GF K G L+ +KL M + P++
Sbjct: 783 AADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNA 839
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P N ++K + V+ + M I P+ + L K ++
Sbjct: 205 GLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAA 264
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV + M + A YN+ I LC+ EEA + M+ G+ P+ TY L++G
Sbjct: 265 KKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNG 324
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G L+ AK L M+ G +P+ + + G+ A + ++ G P+
Sbjct: 325 LCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPN 384
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
+L+ GL I ++ A++L+ M K
Sbjct: 385 KIMYDNLIRGLCKIGQLGRASKLLNEMIK 413
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ ++ ++G + ++ M + P LL + E V K+ ME G
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V Y+ +++ CK + + AK + + M R N TY +I G + G +E A
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
M + G PD++ + LC+GG + A + G P+ +LV G
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360
Query: 368 ASISKVAEANELIGLM 383
K AEA +++ M
Sbjct: 361 MKEGKAAEAFDILNEM 376
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%)
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ + K +V+ MM G+A N ++ L + E L M
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI P++ TY + K + + AKK+F M C + + + LC+ G E A
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ G P T +L+ GL ++ EA L+ M
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEM 341
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
++ M D A + F+EMD +G+ V + L+ G EE +I+ E + GI+P+
Sbjct: 177 RSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM-RHRGIKPDL 235
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+++ +I F G + L EMR + P+ + +++ GF + D +V
Sbjct: 236 VSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE 295
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M CG V YN + LCK +R +A+ LL+ M RG+ P+L T+ LIHG+ EG
Sbjct: 296 MVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 355
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+ A +LF +M N PD + +C+ G+ + A + ++ P+ T
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 415
Query: 363 LVTGLASISKVAEA 376
L+ +V +A
Sbjct: 416 LIDSHCEKGQVEDA 429
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 1/225 (0%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+++V + +E K + P+ T+N ++ + +GD+ + +++ M K ++P +
Sbjct: 111 FDKVDAVISEMEK-RCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYN 169
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L G + ++ +V + M+ G+A V + I I C++ EEA + M R
Sbjct: 170 SVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHR 229
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GIKP+L ++ LI F + G ++ A M G PD + M C+ G A
Sbjct: 230 GIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 289
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L+V + G +P T +L+ GL ++ +A L+ M++R
Sbjct: 290 LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 127/315 (40%), Gaps = 8/315 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D +F+I + + ++ +E++ R PDL I L+ + +DHA
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCL----IGLFARRGKMDHA 254
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M EM +GL ++ G + + R+ E G P+ TYN ++
Sbjct: 255 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC-GCLPDVVTYNTLLN 313
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ +L EMR + + P+ F L+ G+ E K + ++ M +
Sbjct: 314 GLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 373
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN I +C+ ++A L D M SR I PN TY LI ++G +E A
Sbjct: 374 DIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFL 433
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N G P+ + C+ G K + M P T +L+ G
Sbjct: 434 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 493
Query: 371 SKVAEANELIGLMKK 385
K+ +A +L+ +M+K
Sbjct: 494 DKMHDAFKLLNMMEK 508
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 125/304 (41%), Gaps = 45/304 (14%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQ 109
S+ R+ D G P D + ++ ++ L + LL E++ R PDL
Sbjct: 287 SDALRVRDEMVGCGCLP----DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 342
Query: 110 NERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+H + G+ +D A+Q F+ M LR + N L+ G + ++ ++
Sbjct: 343 FTTL-IHGYCIEGK---LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 398
Query: 170 TE------FPK--VY--------------------------GIEPNSETYNKVIKSFCES 195
+ FP Y GI PN TYN +IK +C S
Sbjct: 399 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRS 458
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G+ S L +M + P+ + L+ G+ KE K D K+L MMEK + V Y
Sbjct: 459 GNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTY 518
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N+ I +EA + + M ++GI+P+ TY +I+G GN + A +L M
Sbjct: 519 NMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 578
Query: 316 GGCE 319
G E
Sbjct: 579 RGKE 582
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 102/253 (40%), Gaps = 1/253 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM + G+ + L+ G + ++ ++F + P+ TYN +I C
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN-QRLRPDIVTYNTLIDGMC 386
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
GD + +M + I PN + +L+ ++ + ED L M GI +
Sbjct: 387 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I+ C+ + + L M+ + P+L TY LIHG+ KE + A KL M
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+PD + M G + A + AKG P T S++ G +
Sbjct: 507 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 566
Query: 374 AEANELIGLMKKR 386
EA +L M +R
Sbjct: 567 KEAFQLHDEMLQR 579
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 147/329 (44%), Gaps = 14/329 (4%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQ 123
L+ +S ++ +I V ++ F+ ++ E++ R PD+ H++++ +
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV------THNVLIDAR 202
Query: 124 --ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
A +D A+ + M GL+ + N++L G + +++ K +F + + P+
Sbjct: 203 FRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQC-SVAPD 261
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
++N +I FC G+ EM+++ + P+ F L+ F K + L+
Sbjct: 262 VRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR 321
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M+ G+ +Y + I C+ EA + D M+ G P++ TY L++G K+
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQH 381
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
L A++L M G PD F + C+ G +E AL++ + + P
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441
Query: 362 SLVTGLASISKVAEANELIGLMKKR--FP 388
SL+ G+ +A+ANEL M R FP
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFP 470
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 139/313 (44%), Gaps = 12/313 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
+ F+ + L + F+ ++ +++ PD+R +I++ G + ++ A
Sbjct: 228 VTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS------FNILIGGFCRVGEVEEA 281
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M+ ++EM + G+ V + + L+ G ++ + + K G+ P+ Y VI
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLI-GLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIG 340
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC +G S + EM P+ + LL G K+H+ D ++L M++ G+
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP 400
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ + I C+ E+A L D +L + ++P++ Y LI G ++G+L A +L+
Sbjct: 401 DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELW 460
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M P+ + + C+ G+ E A ++KG +P+ T S++ G
Sbjct: 461 DDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRS 520
Query: 371 SKVAEANELIGLM 383
V + + + M
Sbjct: 521 GNVKKGQQFLQKM 533
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 132/311 (42%), Gaps = 12/311 (3%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR--- 104
R S S R+ D G P D + ++ ++ L + + +LL E+K R
Sbjct: 344 RAGSMSEALRVRDEMVGLGCLP----DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PDL +H Y + + A+Q F+ + LR V A N+L+ G + +
Sbjct: 400 PDLCTFTTL-IHG---YCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAK 455
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
++ + I PN TY+ +I S CE G + L EM K PN + ++
Sbjct: 456 ANELWDDM-HAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSII 514
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G+ + + + LQ M + I + +N I K + A + + M ++
Sbjct: 515 KGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQ 574
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ TY +I+GF ++GN+E A ++F M G EPD Y + G + A ++
Sbjct: 575 PDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQL 634
Query: 345 CRASMAKGWVP 355
M +G+ P
Sbjct: 635 HDEMMHRGFAP 645
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 2/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q ++D A + EM + G+ + L+ G N+E+ ++F + P+
Sbjct: 380 QHRLLD-AEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH-QRLRPDV 437
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN +I C GD + + +M + I PN + +L+ ++ + E+ L
Sbjct: 438 VAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDE 497
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G + YN I+ C+ ++ + L M+ I P+L T+ LIHG+ KE N
Sbjct: 498 MVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEEN 557
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ GA +F M +PD+ + M + G E A +V + A G P T S
Sbjct: 558 MHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMS 617
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ G + EA +L M R
Sbjct: 618 LINGHVTAGNSKEAFQLHDEMMHR 641
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 133/341 (39%), Gaps = 15/341 (4%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR--- 104
R FR +D C S+AP D +F+I + + + +E++ R
Sbjct: 242 RFDKAKEVFRAMDQC---SVAP----DVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVT 294
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PD+ I L+ +DHA EM GL ++ G + + E
Sbjct: 295 PDVVSFSCL----IGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE 350
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
R+ E + G P+ TYN ++ C+ +L EM+ + + P+ F L+
Sbjct: 351 ALRVRDEMVGL-GCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLI 409
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G+ ++ +E ++ + + V YN I +C+ +A L D M +R I
Sbjct: 410 HGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIF 469
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
PN TY LI ++G +E A M + G P+ + C+ G + +
Sbjct: 470 PNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQF 529
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ M +P T +L+ G + A + +M+K
Sbjct: 530 LQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 97/213 (45%), Gaps = 2/213 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A++ + + + ++L +++ R ++ N + I + + ++ A
Sbjct: 436 DVVAYNSLIDGMCRKGDLAKANELWDDMHAR-EIFPNHVTYSILIDSHCEKGQVEEAFGF 494
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM G ++ N+++ G S N ++ ++ + + I P+ T+N +I +
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQ-DNILPDLITFNTLIHGYI 553
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +++ M ++ ++P+A + +++ GF ++ E+ G+V + M GI
Sbjct: 554 KEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRY 613
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
Y I S+EA L D M+ RG P+
Sbjct: 614 TYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 5/261 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++H TF + K G R + +N LL G +K E I + G P+ +YN
Sbjct: 110 LEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYN 169
Query: 187 KVIKSFC---ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV-LQM 242
++K FC + ++ + ++A+ + +S PN + +++ GF+ E + + + L+M
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEM 229
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M++ GI V Y I LCK + + A+ + M+ +G+KP+ DTY LIHG+ G
Sbjct: 230 MDR-GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ ++ M+ G +PD Y + +LC G A + + + KG P+ +
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGI 348
Query: 363 LVTGLASISKVAEANELIGLM 383
L+ G A+ ++E ++L+ LM
Sbjct: 349 LIHGYATKGALSEMHDLLNLM 369
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 148/320 (46%), Gaps = 2/320 (0%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P + ++++I ++ + L E+ R ++ N + I +A ++D A
Sbjct: 200 PPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDR-GIQPNVVTYTTVIDGLCKAQVVDRAE 258
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F++M G++ D N L+ G + ++EV R+ E +G++P+ TY ++
Sbjct: 259 GVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM-SAHGLKPDCYTYGSLLNY 317
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C +G + M RK I+PN +G+L+ G+ + ++ +L +M + G++
Sbjct: 318 LCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPD 377
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+++NI + K +EA + + M +G+ P++ Y LI K G ++ A F
Sbjct: 378 HHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFN 437
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M N G P+ + F Y LC ++E A + + +G P +++ L +
Sbjct: 438 QMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKG 497
Query: 372 KVAEANELIGLMKKRFPKSG 391
+V +A LI LM++ + G
Sbjct: 498 QVMKAQRLIDLMERVGTRPG 517
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M++ G R V + L+ G L +E + V G++P+ TYN ++
Sbjct: 502 AQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV-GLKPDEWTYNTLL 560
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C +G Y + EM R I P + +L G + ++ + ++ M G
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +YNI + L K +EA L + S+ + + T+ +I K G E A L
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
FA++++ G PD + + + L + G E + A G P+ + +LV L
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLH 740
Query: 370 ISKVAEA 376
+ A
Sbjct: 741 RGDITRA 747
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 5/233 (2%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E IF + K G+ P+ Y +I + C+ G +M + + PN F
Sbjct: 395 DEAMHIFNKM-KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K+E + M GI V +N + +LC + +A+ L+D M G
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+P + +Y LI G G ++ A K M + G +PD + + + C+ G + A
Sbjct: 514 TRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
V R + G P T +++ GL + + +EA EL M SG WN
Sbjct: 574 GVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNM----ITSGKQWN 622
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F +M G+ ++ N+L+ G +E+ K + E GI P+ +N
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN-QGIRPDVVFFN 487
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + C G ++ M R RP + L+ G + ++ K L +M
Sbjct: 488 TILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSV 547
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ YN + C+ R ++A + ML GI P + TY ++HG A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+L+ +M G + + + + + L + + A K+ ++ +K + +T ++
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGA 667
Query: 367 L 367
L
Sbjct: 668 L 668
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 111/267 (41%), Gaps = 13/267 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCIL-------SKNYEEVKRIFTEFPK--VYG 177
+D A++ F+ + + SV A N LL + E V +F +
Sbjct: 30 LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY-EDV 236
+ P+ TY+ +I FC G ++ + + R N LL G + E +
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS---RGIKPNLDTYKHL 293
+++ M + G V YN ++ C KR+EEA LL M R PN+ +Y +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I+GF EG ++ A LF M + G +P+ + LC+ + A V + + KG
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI 380
P T L+ G SI K E ++
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRML 296
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 98/254 (38%), Gaps = 2/254 (0%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETYNKVIKSF 192
+ M + G V + N LL G K EE + G PN +Y VI F
Sbjct: 154 KRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGF 213
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
G Y++ EM + I+PN + ++ G K + V Q M G+
Sbjct: 214 FTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDN 273
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ YN I + + +E +L+ M + G+KP+ TY L++ G A+ LF S
Sbjct: 274 DTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDS 333
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G +P+ + + + G + + G P + T A +
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Query: 373 VAEANELIGLMKKR 386
+ EA + MK++
Sbjct: 394 IDEAMHIFNKMKQQ 407
>gi|86438766|emb|CAJ75625.1| pentatricopeptide repeat-containing protein [Brachypodium
sylvaticum]
Length = 289
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 122/221 (55%), Gaps = 5/221 (2%)
Query: 14 KTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPL 73
++ N+R + A D+ + ++ + + R+K+E NP R+ ++ +
Sbjct: 57 RSKNHRRRPPDAPAGAEDKGS----RDSETPLLVRIKNERNPKRLYELFRANAHNRLLVE 112
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+R AF AV++LS A + + ++LE+ K P R+ E F V I LYG+A M +HA++T
Sbjct: 113 NRFAFQDAVARLSGARRNDLVEEILEQHKALPQGRR-EGFVVRIIGLYGKARMPEHALRT 171
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM+ YG + + NA L + ++ +++ ++F E P YG+E + +YN V+K C
Sbjct: 172 FQEMEMYGCTCTNKSFNATLKVLMQAQLFDKALQLFEEGPGKYGVELDDISYNTVVKMMC 231
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ G + Y ++ EM ++ I+P+ + L+A FYK + E
Sbjct: 232 DMGQLRAAYRVMQEMEKEGIQPDVITYTTLMAAFYKNGQRE 272
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 238 KVLQMMEKCGIASGVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
K LQ+ E+ GV + YN ++ +C + + A ++ M GI+P++ TY L
Sbjct: 202 KALQLFEEGPGKYGVELDDISYNTVVKMMCDMGQLRAAYRVMQEMEKEGIQPDVITYTTL 261
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEP 320
+ F K G E L+ M GC P
Sbjct: 262 MAAFYKNGQREVGDGLWNLMRLRGCMP 288
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 8/309 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
DR+ V+ + N + L++ E+ +PD+ + S+ + ++ A
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-IDSLC---KTKRVNDA 209
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F+E+++ G+R +V AL+ G S + + R+ ++ K I PN TY+ ++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLD 268
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+F ++G + EM R SI P+ + L+ G + ++ ++ +M G +
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN I CK KR E+ L M RG+ N TY LI GF + G+++ A++ F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M G PD + + + LC GE E AL + + T +++ G+
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 371 SKVAEANEL 379
KV EA L
Sbjct: 449 GKVEEAWSL 457
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 10/317 (3%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMD 138
A+ KL + + ++ + +E L R DL + +IV+ + + A+ +M
Sbjct: 94 AIVKLKKYDVVISLGKKMEVLGIRNDL------YTFNIVINCFCCCFQVSLALSILGKML 147
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K G + +L+ G + + + ++ G +P+ YN +I S C++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRV 206
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ + E+ RK IRPN + L+ G ++ D ++L M K I V Y+
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ + K + EAK L + M+ I P++ TY LI+G ++ A ++F M + GC
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
D + C+ E +K+ R +G V + T +L+ G V +A E
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 379 LIGLMKKRFPKSGDMWN 395
M F S D+W
Sbjct: 387 FFSQM-DFFGISPDIWT 402
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 131/313 (41%), Gaps = 4/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A++ + L + N +E++ R +R N + + ++ A +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M K + +V +ALL + + E K +F E ++ I+P+ TY+ +I C
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM-SIDPDIVTYSSLINGLC 306
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ M K + + L+ GF K + ED K+ + M + G+ S
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN IQ + ++A+ M GI P++ TY L+ G G LE A +F M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKGWVPHFSTMKSLVTGLASISK 372
+ D + +C+ G+ E A + C S+ KG P T ++++GL +
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL-KGLKPDIVTYTTMMSGLCTKGL 485
Query: 373 VAEANELIGLMKK 385
+ E L MK+
Sbjct: 486 LHEVEALYTKMKQ 498
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A Q F+ M G V + N L+ G +K E+ ++F E + G+ N+ TYN
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYN 369
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ F ++GD ++M I P+ + +LL G + E + + M+K
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + Y I+ +CK + EEA +L + +G+KP++ TY ++ G +G L
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Query: 307 KKLFASMTNGG 317
+ L+ M G
Sbjct: 490 EALYTKMKQEG 500
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+ ++M + P+ DF LL+ K KY+ V + + ME GI + + +NI I C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+ A ++L ML G +P+ T L++GF + + A L M G +PD
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ LC+ A + KG P+ T +LV GL + S+ ++A L+ M
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 384 KKR 386
K+
Sbjct: 252 IKK 254
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 147/317 (46%), Gaps = 12/317 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQT 133
++F++ + L++ H++ + L +++ L N F +I++ N + +
Sbjct: 92 ISFNLLLGALAKIKHYSQVFSLYKKMHL-AGLSPN--FFTLNILINCLCNVNRVREGLSA 148
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ + G V +L+ G + E R+F K+ G PN TY +IK C
Sbjct: 149 MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKL-GCWPNVVTYGTLIKGLC 207
Query: 194 ESGDSSSVYSILAEMRRKS------IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+G+ + + EM + +PN + +++ K K+++ ++ M G
Sbjct: 208 RTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQG 267
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V ++ I +LCK EAK L+ M+ RGI P+L T+ LI GF G+L+ AK
Sbjct: 268 VRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAK 327
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF SM + G EPD + + Y C+ E A+K+ + G P T L+ GL
Sbjct: 328 ELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGL 387
Query: 368 ASISKVAEANELIGLMK 384
KV +A +L G++K
Sbjct: 388 FLAGKVGDAKKLFGVVK 404
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 137/313 (43%), Gaps = 8/313 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+++I + +L + + +L E+ RPD+ I + M+ A +
Sbjct: 239 SYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSAL----IDTLCKEGMVIEAKKF 294
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E M G+ + +L+ G L + + K +F P G EP+ +Y +I +C
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPS-KGYEPDVISYTVLIYGYC 353
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ + + EM R P+ F +LL G + K D K+ +++ + +
Sbjct: 354 KTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLY 413
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+ ++ + LCK EA L + + S +K +++++ LI G K LE A +LF +
Sbjct: 414 ICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKL 473
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G +PD + + C+ G+ + A + + G P+ T +L+ G +K+
Sbjct: 474 SQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKL 533
Query: 374 AEANELIGLMKKR 386
E +L+ M ++
Sbjct: 534 EEVVKLLHKMIQK 546
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 122/312 (39%), Gaps = 59/312 (18%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID-HAMQTFEEMDKYGL 142
++S ANH + L L R L+ +H+ + N+ A+Q F+ M
Sbjct: 40 QISSANH----PKSLHALSERISLQHGLPMFIHNC---KKGNITSTQALQFFDLM----- 87
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSS 200
+S+ + N LL K+Y +V F+ + K++ G+ PN T N +I C
Sbjct: 88 MRSIISFNLLLGALAKIKHYSQV---FSLYKKMHLAGLSPNFFTLNILINCLCNVNRVRE 144
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S +A + R+ P+ + L+ G EH
Sbjct: 145 GLSAMAGIMRRGYIPDVVTYTSLIKGLCMEH----------------------------- 175
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG---- 316
R EA L M G PN+ TY LI G + GN+ A KL M NG
Sbjct: 176 ------RISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPY 229
Query: 317 --GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
C+P+ + + + LC+ G+++ A ++ + +G P T +L+ L V
Sbjct: 230 AINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVI 289
Query: 375 EANELIGLMKKR 386
EA + + M R
Sbjct: 290 EAKKFLETMMLR 301
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A +M+ + V N ++ ++ ++ +F E + GI PN TY+
Sbjct: 165 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYS 223
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G S +L++M K I PN F L+ F KE K+ + K+ M K
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 283
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + YN I C R ++AK + + M+S+ P+LDTY LI GF K +E
Sbjct: 284 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 343
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M++ G D+ + L G+ + A KV + ++ G P T L+ G
Sbjct: 344 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403
Query: 367 LASISKVAEANELIGLMKK 385
L + K+ +A E+ M+K
Sbjct: 404 LCNNGKLEKALEVFDYMQK 422
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 106/266 (39%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I A+ ++M + G R L+ G L E + + G +P
Sbjct: 89 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQP 147
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY V+ C+ GD +++L +M I + F ++ K +D +
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME GI V Y+ I LC R +A LL M+ + I PNL T+ LI F KE
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A+KL M +PD + + C + A ++ ++K P T
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V + EL M R
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHR 353
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 140/323 (43%), Gaps = 10/323 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + F+ + L + H + L +E++T RP++ + + YG+ + A
Sbjct: 183 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL-ISCLCSYGRWS---DA 238
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q +M + + ++ NAL+ + + E +++ + K I+P+ TYN +I
Sbjct: 239 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RSIDPDIFTYNSLIN 297
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + M K P+ + L+ GF K + ED ++ + M G+
Sbjct: 298 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 357
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y IQ L + A+ + M+S G+ P++ TY L+ G G LE A ++F
Sbjct: 358 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 417
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + D Y + +C+ G+ + + + KG P+ T ++++GL S
Sbjct: 418 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 477
Query: 371 SKVAEANELIGLMKKR--FPKSG 391
+ EA L+ MK+ P SG
Sbjct: 478 RLLQEAYALLKKMKEDGPLPDSG 500
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 134/312 (42%), Gaps = 8/312 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ +S +S L ++ SQLL ++ K P+L F+ + ++ A +
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT---FNALIDAFVKEGKFVE-AEK 275
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++M K + + N+L+ G + ++ K++F EF P+ +TYN +IK F
Sbjct: 276 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF-EFMVSKDCFPDLDTYNTLIKGF 334
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+S + EM + + + + L+ G + + ++ KV + M G+ +
Sbjct: 335 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 394
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+I + LC + E+A + D M IK ++ Y +I G K G ++ LF S
Sbjct: 395 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 454
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
++ G +P+ + LC + A + + G +P T +L+
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 514
Query: 373 VAEANELIGLMK 384
A + ELI M+
Sbjct: 515 KAASAELIREMR 526
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSI--LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ +NK++ + + V S+ L +M + P+ LL G+ + D
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ M + G + I L ++ EA AL+D M+ RG +PNL TY +++G
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G+++ A L M E D F LC+ + AL + + KG P+
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T SL++ L S + ++A++L+ M ++
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEK 248
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 3/268 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI--FTEFPKVYGI 178
+G+ +D A+ F M K S+ N LL K ++ V + + K+ G
Sbjct: 17 WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKL-GY 75
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
EP+ T + ++ +C S +++ +M RP+ F L+ G + +K +
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
++ M + G + Y + + LCK + A LL+ M + I+ ++ + +I
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K +++ A LF M G P+ + LC G + A ++ + K P+
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K EA +L M KR
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKR 283
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 116 HSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI+L G N ++ A++ F+ M K ++ + ++ G + ++ +F
Sbjct: 397 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL- 455
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G++PN TYN +I C Y++L +M+ P++ + L+ ++
Sbjct: 456 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDK 515
Query: 234 EDVGKVLQMMEKC 246
++++ M C
Sbjct: 516 AASAELIREMRSC 528
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D M +SI + L ++ + ++ + +++ + + I +A +D
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGW 449
Query: 132 QTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
F + G++ +V N ++ G +L + Y +K++ + P P+S TYN
Sbjct: 450 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-----PDSGTYNT 504
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+I++ GD ++ ++ EMR +A+ GL+
Sbjct: 505 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 540
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 9/291 (3%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLG 155
+E L +P++ ++ V++G + ++ A + M G+ +L+ G
Sbjct: 262 MENLGVKPNVV------TYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISG 315
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
EE I + ++ G+ P + TYN +I +C GD + EM R++I P
Sbjct: 316 MCKGGKLEEASGILEKMKEI-GLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILP 374
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + LL+ + E K ++ +++ M GI YNI I C+ +++A L
Sbjct: 375 TVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLH 434
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
D M+S+GI+P L TY LI+ K ++ A LF + G PD F C
Sbjct: 435 DEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCAN 494
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G + A + + + VP T +L+ G KV EA EL+ MK+R
Sbjct: 495 GNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRR 545
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+S ++ +I++ CE + M+ K + P F +L+ F K ++ E V +
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M + I S V +NI I LCK + ++AK + M + G+KPN+ TY +IHG+
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G +EGA+ + M N G EPDSY + +C+GG+ E A + G +P T
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344
Query: 361 KSLVTGLASISKVAEA 376
+L+ G + + +A
Sbjct: 345 NTLIDGYCNKGDLVKA 360
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L+ + N + + EM + ++ +V N +++ + + + + F + G++
Sbjct: 210 LFLKLNQTETVWVLYAEMFRLKIKSTVYTFN-IMINVLCKEGKLKKAKDFIGSMENLGVK 268
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN VI +C G +L M+ + + P++ +G L++G K K E+ +
Sbjct: 269 PNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGI 328
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M++ G+ YN I C +A D M+ R I P + TY LIH
Sbjct: 329 LEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFL 388
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG ++ A + M + G PDS + + C+ G + A + ++KG P T
Sbjct: 389 EGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVT 448
Query: 360 MKSLVTGLASISKVAEANEL 379
SL+ L+ +++ A++L
Sbjct: 449 YTSLIYVLSKRNRMKAADDL 468
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 2/243 (0%)
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
D+ G + S+ + L+ C K ++ F + K G+ P ET+N ++ F +
Sbjct: 159 DRLGTKSSI-VFDMLIRACCELKRGDDAFECF-DMMKEKGVVPKIETFNAMLSLFLKLNQ 216
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ +V+ + AEM R I+ F +++ KE K + + ME G+ V YN
Sbjct: 217 TETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNT 276
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I C R E A+ +LD M +RG++P+ TY LI G K G LE A + M G
Sbjct: 277 VIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIG 336
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P + + C G+ A + + +P ST L+ L K+ EA+
Sbjct: 337 LLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEAD 396
Query: 378 ELI 380
+I
Sbjct: 397 GMI 399
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 45/358 (12%)
Query: 58 ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
+LDI + P+S + +S + + S +LE++K L ++
Sbjct: 293 VLDIMKNRGVEPDS----YTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT-- 346
Query: 118 IVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
++ G N D A +EM + + +V N L+ L +E + +
Sbjct: 347 -LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD- 404
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN------------------A 217
GI P+S TYN +I +C G++ +++ EM K I+P A
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464
Query: 218 TD-----------------FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
D F L+ G + +L+ M+K I YN +Q
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQ 524
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
C+ + EEA+ LL M RGI+P+ +Y LI G+ K G++ A + M + G P
Sbjct: 525 GRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNP 584
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
+ LC+ + + A ++ + ++KG P ST SL+ G+ + +EA++
Sbjct: 585 TLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
Query: 180 PNSETYNKVIKSFCES--GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ ++ ++K ES V+ LA R + ++ F +L+ + + +D
Sbjct: 127 PSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAF 186
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ MM++ G+ + +N + KL ++E L M IK + T+ +I+
Sbjct: 187 ECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVL 246
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KEG L+ AK SM N G +P+ + + C G E A V +G P
Sbjct: 247 CKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDS 306
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
T SL++G+ K+ EA+ ++ MK+
Sbjct: 307 YTYGSLISGMCKGGKLEEASGILEKMKE 334
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
++ G S + V+++ I++ C+LKR ++A D M +G+ P ++T+ ++ F K
Sbjct: 159 DRLGTKSSI-VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQT 217
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E L+A M + Y F + LC+ G+ + A + G P+ T ++
Sbjct: 218 ETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTV 277
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ G S +V A ++ +MK R
Sbjct: 278 IHGYCSRGRVEGARMVLDIMKNR 300
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 34/293 (11%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE--------- 171
Y +A +D A+ TF M+KYG+ ++ A N+LL SKN + + IF +
Sbjct: 145 YARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLLGALCKSKNVRKAQEIFDKMNSRFSPDA 204
Query: 172 ---------------FPK---VY------GIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
PK VY G EP+ TY ++ S C++G ++ +
Sbjct: 205 KTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCKTGRVEEAVRVVQD 264
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + +P + +L+ + E + ED MEK GI + VYN + + CK K+
Sbjct: 265 MTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSAFCKAKK 324
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
E A +L+ M GI N T+ +++ G + A K+F M C+PD + M
Sbjct: 325 FENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQPDCDTYTM 383
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ + E ALKV + K ++P T L+ GL +V++A L+
Sbjct: 384 MIKMFCENDKVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKREVSQACVLL 436
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 7/243 (2%)
Query: 148 ALNALLLGCILSK-----NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
A+N G I+ K +E F K YG+ PN +N ++ + C+S +
Sbjct: 132 AVNVETFGIIMRKYARAQKVDEAVYTFNVMEK-YGVVPNLAAFNSLLGALCKSKNVRKAQ 190
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
I +M + P+A + +LL G+ + + +V M G + Y I + SL
Sbjct: 191 EIFDKMNSR-FSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSL 249
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CK R EEA ++ M SRG +P Y L+H +G E +E A F M G PD
Sbjct: 250 CKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDI 309
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ C+ ++E A +V G + T ++ L S+ + EA ++
Sbjct: 310 VVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISLGRDDEAYKVFRR 369
Query: 383 MKK 385
M K
Sbjct: 370 MIK 372
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 7/230 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D + + I V L + ++++++ +R +++S+++ YG I+ A+
Sbjct: 238 DIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRG---CQPTTYIYSVLVHTYGVEMRIEDAV 294
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
TF +M+K G+ + NAL+ +K +E R+ + +GI NS T+N ++
Sbjct: 295 ATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEG-HGITTNSRTWNIILNH 353
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
G Y + M K +P+ + +++ F + K E KV + M
Sbjct: 354 LISLGRDDEAYKVFRRMI-KCCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPS 412
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
++ +++ I LC + +A LL+ M+ +GI+P T+ L KEG
Sbjct: 413 MHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG 462
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 143/314 (45%), Gaps = 13/314 (4%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQA--NMIDHAMQ 132
++I + L + L + L+ R PD +S ++ G A + +DHA+
Sbjct: 161 YNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCI------TYSTLMCGLAKQDRLDHALD 214
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+EM + G++ V NALL GC + +E+V R++ + K G PN TYN ++
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGL 274
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G V + M +++P+ +G+L+ G + + +V + K G+
Sbjct: 275 CKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDA 334
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+YN ++ C+ R +EA D G++ NL TY +I G G ++ A +L+
Sbjct: 335 AMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDL 393
Query: 313 M-TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + C PD+ F + LCQ G A + + G + S++ GL ++
Sbjct: 394 LEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVG 453
Query: 372 KVAEANELIGLMKK 385
++ +A ++ M K
Sbjct: 454 RLVDAVKVYEKMDK 467
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 7/296 (2%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY-GLRQ 144
S +H + LL L+ RP ++ V S + +A M D A+ F + G
Sbjct: 60 SSPSHLPCLLNLLPRLRHRPRFSESAALVVLSA--FSRAIMPDAALDAFRALPSILGCNP 117
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPK-VYG--IEPNSETYNKVIKSFCESGDSSSV 201
+ + NALL + ++ + + F +G I PN +TYN V++S C GD
Sbjct: 118 GIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRA 177
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
++ +RR+ + P+ + L+ G K+ + + +L M + G+ V YN +
Sbjct: 178 VTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGG 237
Query: 262 LCKLKRSEEAKALLDGML-SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
K E+ + D ++ G +PNL TY ++ G K G + +++ M +P
Sbjct: 238 CFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQP 297
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
D + + + LC+ G+ + A +V + G V + SLV G +V EA
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 129/294 (43%), Gaps = 7/294 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV--LYGQANMIDHAM 131
D + F + L Q N + EE R +Q + F S++ L ++D A+
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEE--ARVSGKQLDVFSYSSMINGLCNVGRLVD-AV 459
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +E+MDK G + + NAL+ G + RI+++ G P TYN +I
Sbjct: 460 KVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD-NGCSPTVITYNTLIDG 518
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++ S+ EM P+ T +G L+ G + + K +D + + + G+
Sbjct: 519 LCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVD 578
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V ++NI I LC + +EA + M + PNL TY L+ G + G ++ A L+
Sbjct: 579 VMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
S+T G EPD + LC +++ +++G +P T LV
Sbjct: 639 TSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 130/313 (41%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + + I + L ++ + +++ E+ + L + + + + QA + A +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEI-IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++ GLR ++ N ++ G S +E ++ K P++ T+ +I C
Sbjct: 357 WDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G ++ ++I E R + + + ++ G + D KV + M+K G +
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I C++ R+ +A + M G P + TY LI G K + A + M
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD + L + + AL + + + KG L+ GL S KV
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 374 AEANELIGLMKKR 386
EA + MK++
Sbjct: 596 DEALHVFSDMKEK 608
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-GIEPN 181
+A A EM + G + +L+ G K ++ I+ + +Y G++ +
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI--LYKGLKVD 578
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMR-RKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+N +I C +G + ++M+ +K+ PN + L+ G Y+ + +
Sbjct: 579 VMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ + G+ + YN RI+ LC R E LLD +LSRGI P + T+ L+ K
Sbjct: 639 TSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKY 698
Query: 301 GNLE 304
G ++
Sbjct: 699 GPIQ 702
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 5/170 (2%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG----IASGVNVYNIRIQSLCKLKRSEE 270
P LL F + ++ D + IA + YNI ++SLC +
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L D + R + P+ TY L+ G K+ L+ A L M G +PD C+
Sbjct: 177 AVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLG 236
Query: 331 FLCQGGEYETALKVC-RASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ GE+E ++V + G P+ +T ++ GL + E E+
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEV 286
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 2/288 (0%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
Q+ E +K R + N + I Y M+D A + F EM + G+ V N L+ G
Sbjct: 249 QMYENMK-RSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
K + E ++ + KV G+ PN TYN +I FC+ G + + +++ + P
Sbjct: 308 LCRGKKFGEAVKLVHKVNKV-GLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSP 366
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ L+AG+ K +++ ME+ IA Y I I + +L +E+A +
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMH 426
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M G+ P++ TY LIHG GN++ A KLF S+ +P+S + + C+
Sbjct: 427 SLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G AL++ + G VP+ ++ S + L K EA L+G M
Sbjct: 487 GSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQM 534
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 131/310 (42%), Gaps = 8/310 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNA---ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
LD +F I + +A +F + +LEE P++ + YG +
Sbjct: 156 LDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL-IDGCCKYGNVML--- 211
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F +MD+ GL + + L+ G E +++ E K GI PN+ YN +I
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY-ENMKRSGIVPNAYAYNCLI 270
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C G + + AEMR K I + +L+ G + K+ + K++ + K G++
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YNI I C + + + A L + + S G+ P L TY LI G+ K NL GA L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M P + + + E A ++ G VP T L+ GL
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV 450
Query: 370 ISKVAEANEL 379
+ EA++L
Sbjct: 451 HGNMKEASKL 460
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDA--LNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
++N D A F E+ + +DA ++ GC + + + R+ + +G+ P
Sbjct: 136 RSNYFDKAWWIFNELKS---KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE-FGLSP 191
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N Y +I C+ G+ ++ +M R + PN + +L+ GF+K+ + ++
Sbjct: 192 NVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY 251
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ GI YN I C ++A + M +GI + TY LI G +
Sbjct: 252 ENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
A KL + G P+ + + C G+ +TA+++ + G P T
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTY 371
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G + + +A A +L+ M++R
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEER 397
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N + A + M+K GL V + L+ G + N +E ++F +++ ++P
Sbjct: 413 FARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMH-LQP 471
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
NS YN +I +C+ G S +L EM + PN F + ++ K+++ +L
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLL 531
Query: 241 QMMEKCGIASGVNVYNI 257
M G+ V++Y +
Sbjct: 532 GQMINSGLKPSVSLYKM 548
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 8/309 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
DR+ V+ + N + L++ E+ +PD+ + S+ + ++ A
Sbjct: 257 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-IDSLC---KTKRVNDA 312
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F+E+++ G+R +V AL+ G S + + R+ ++ K I PN TY+ ++
Sbjct: 313 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLD 371
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+F ++G + EM R SI P+ + L+ G + ++ ++ +M G +
Sbjct: 372 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 431
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN I CK KR E+ L M RG+ N TY LI GF + G+++ A++ F
Sbjct: 432 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 491
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M G PD + + + LC GE E AL + + T +++ G+
Sbjct: 492 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 551
Query: 371 SKVAEANEL 379
KV EA L
Sbjct: 552 GKVEEAWSL 560
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 10/316 (3%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMD 138
A+ KL + + ++ + +E L R DL + +IV+ + + A+ +M
Sbjct: 197 AIVKLKKYDVVISLGKKMEVLGIRNDL------YTFNIVINCFCCCFQVSLALSILGKML 250
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K G + +L+ G + + + ++ G +P+ YN +I S C++
Sbjct: 251 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRV 309
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ + E+ RK IRPN + L+ G ++ D ++L M K I V Y+
Sbjct: 310 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 369
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ + K + EAK L + M+ I P++ TY LI+G ++ A ++F M + GC
Sbjct: 370 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 429
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
D + C+ E +K+ R +G V + T +L+ G V +A E
Sbjct: 430 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 489
Query: 379 LIGLMKKRFPKSGDMW 394
M F S D+W
Sbjct: 490 FFSQM-DFFGISPDIW 504
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A Q FE M V N L+ G K EE +F E + G+ N+ TYN
Sbjct: 991 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYN 1049
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ ++GD I EM + PN + LL G K K E V + +++
Sbjct: 1050 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 1109
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YNI I+ +CK + E+ L + +G+KP++ Y +I GF ++G+ E A
Sbjct: 1110 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 1169
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M G P+S C+ + G+ E + ++ + + G+ ST+ LVT
Sbjct: 1170 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTN 1228
Query: 367 L 367
+
Sbjct: 1229 M 1229
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 1/249 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A +M++ L V N ++ G K+ ++ +F E + GI PN TY+
Sbjct: 852 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSS 910
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C G S +L++M + I P+ F L+ F KE K + K+ M K
Sbjct: 911 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 970
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I + Y+ I C R +EAK + + M+S+ P++ TY LI GF K +E
Sbjct: 971 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 1030
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F M+ G ++ + + L Q G+ + A ++ + ++ G P+ T +L+ GL
Sbjct: 1031 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 1090
Query: 368 ASISKVAEA 376
K+ +A
Sbjct: 1091 CKNGKLEKA 1099
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + I A+ ++M G + + N L+ G L E + G +P
Sbjct: 775 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQP 833
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY V+ C+ GD+ +++L +M + + P + ++ G K +D +
Sbjct: 834 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 893
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME GI V Y+ I LC R +A LL M+ R I P++ T+ LI F KE
Sbjct: 894 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 953
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KL+ M +P + C + A ++ ++K P T
Sbjct: 954 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 1013
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V E E+ M +R
Sbjct: 1014 NTLIKGFCKYKRVEEGMEVFREMSQR 1039
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 140/322 (43%), Gaps = 12/322 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ ++ + L + H + L +E++T RP++ + + YG+ + A +
Sbjct: 871 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL-ISCLCNYGRWS---DASR 926
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+M + + V +AL+ + E ++++ E K I+P+ TY+ +I F
Sbjct: 927 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK-RSIDPSIVTYSSLINGF 985
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C + M K P+ + L+ GF K + E+ +V + M + G+
Sbjct: 986 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YNI IQ L + + A+ + M+S G+ PN+ TY L+ G K G LE A +F
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 1105
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKGWVPHFSTMKSLVTGLASIS 371
+ EP Y + + +C+ G+ E + C S+ KG P ++++G
Sbjct: 1106 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL-KGVKPDVVAYNTMISGFCRKG 1164
Query: 372 KVAEANELIGLMKK--RFPKSG 391
EA+ L MK+ P SG
Sbjct: 1165 SKEEADALFKEMKEDGTLPNSG 1186
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+EP YN +I C+ ++ EM K IRPN + L++ ++ D
Sbjct: 866 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++L M + I V ++ I + K + EA+ L D M+ R I P++ TY LI+GF
Sbjct: 926 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 985
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
L+ AK++F M + C PD + C+ E ++V R +G V +
Sbjct: 986 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 1045
Query: 358 STMKSLVTGLASISKVAEANEL 379
T L+ GL A E+
Sbjct: 1046 VTYNILIQGLFQAGDCDMAQEI 1067
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EM K S+ + LL I N +V E + GI N TY+
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLL-SAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC ++L +M + PN LL G+ + + ++ M
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G +N I L ++ EA AL+D M+++G +P+L TY +++G K G+ + A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G EP + LC+ + AL + + KG P+ T SL++
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914
Query: 367 LASISKVAEANELIGLMKKR 386
L + + ++A+ L+ M +R
Sbjct: 915 LCNYGRWSDASRLLSDMIER 934
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ M+ F EM + GL + N L+ G + + + + IF E G+ PN TYN
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS-DGVPPNIMTYN 1084
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G + ++R + P + +++ G K K ED + +
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 1144
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V YN I C+ EEA AL M G PN Y LI ++G+ E +
Sbjct: 1145 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 1204
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
+L M + G D+ + T L G
Sbjct: 1205 AELIKEMRSCGFAGDASTIGLVTNMLHDG 1233
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 129/312 (41%), Gaps = 2/312 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A++ + L + N +E++ R +R N + + ++ A +
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWSDAARL 350
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M K + +V +ALL + + E K +F E ++ I+P+ TY+ +I C
Sbjct: 351 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM-SIDPDIVTYSSLINGLC 409
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ M K + + L+ GF K + ED K+ + M + G+ S
Sbjct: 410 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 469
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN IQ + ++A+ M GI P++ TY L+ G G LE A +F M
Sbjct: 470 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 529
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ D + +C+ G+ E A + + KG P T ++++GL + +
Sbjct: 530 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 589
Query: 374 AEANELIGLMKK 385
E L MK+
Sbjct: 590 HEVEALYTKMKQ 601
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A Q F+ M G V + N L+ G +K E+ ++F E + G+ N+ TYN
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYN 472
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ F ++GD ++M I P+ + +LL G + E + + M+K
Sbjct: 473 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 532
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + Y I+ +CK + EEA +L + +G+KP++ TY ++ G +G L
Sbjct: 533 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 592
Query: 307 KKLFASMTNGG 317
+ L+ M G
Sbjct: 593 EALYTKMKQEG 603
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 124/302 (41%), Gaps = 3/302 (0%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQ 144
LS+ +A++ E +K+RP E + S + + N D + E+M G+
Sbjct: 671 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI--AKMNKFDVVISLGEQMQNLGIPH 728
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
+ ++L+ C ++ + G EPN T + ++ +C S S ++
Sbjct: 729 N-HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 787
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+ +M +PN F L+ G + +K + ++ M G + Y + + LCK
Sbjct: 788 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
++ A LL+ M ++P + Y +I G K +++ A LF M G P+
Sbjct: 848 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ LC G + A ++ + + P T +L+ K+ EA +L M
Sbjct: 908 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967
Query: 385 KR 386
KR
Sbjct: 968 KR 969
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M + P+ DF LL+ K KY+ V + + ME GI + + +NI I
Sbjct: 174 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 233
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A ++L ML G +P+ T L++GF + + A L M G +PD
Sbjct: 234 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 293
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ LC+ A + KG P+ T +LV GL + S+ ++A L+
Sbjct: 294 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 353
Query: 383 MKKR 386
M K+
Sbjct: 354 MIKK 357
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 2/311 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD + ++ + + ++QLL ++ + F++ L + +++ A
Sbjct: 228 LDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE-AQG 286
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M K G + + NAL+ G +N E + +F K G+EP+ YN +I +
Sbjct: 287 VLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK-RGLEPDVLNYNVLIDGY 345
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++ + E+ K++ P + L+ G + V K+L M V
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YNI I +LCK R EA +L M+ +G+KPN+ TY ++ G+ N+ AK +F
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G EPD + + C+ + A+ + + K +P ++ SL+ GL ++ +
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 373 VAEANELIGLM 383
+ EL+ M
Sbjct: 526 IPHVQELLDEM 536
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 143/330 (43%), Gaps = 3/330 (0%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
F+ LD C LA D+ + ++ LS+ A LL+E++ + ++ N +
Sbjct: 142 FKALDFCQNL-LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME-KSSVQPNLVMYS 199
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I + + A+ ++ + G+ N+L+ GC ++EV ++ T+ +
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR- 258
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
++P+ T+N +I + C+ G +LA M ++ +P+ + L+ G+ +
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ M K G+ V YN+ I CK K +EA L + ++ + P + +Y LI
Sbjct: 319 ARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID 378
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G G + KKL M PD + + LC+ G AL V M KG P
Sbjct: 379 GLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKP 438
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ T +++ G + V A ++ M K
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 2/258 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + M+D AM F+E+ L ++ + N+L+ G S VK++ E P
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG-SAQPP 403
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I + C+ G +L M +K ++PN + ++ G+ + +
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M K G+ + YN+ I CK + +EA L M + + P++ +Y LI G
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + ++L M + G PD + + C+ ++ A+ + R + W P F T
Sbjct: 524 GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTN 582
Query: 361 KSLVTGLASISKVAEANE 378
++V L K+ A +
Sbjct: 583 HAIVDNLCKGEKLKMAED 600
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 2/273 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ +EM+K ++ ++ +AL+ G + + ++ + GI ++ TYN
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE-RGILLDAVTYN 234
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G V +L +M R+++ P+ F +L+ KE + + VL MM K
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN ++ C + EA+ L + M+ RG++P++ Y LI G+ K ++ A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF + N P + LC G K+ P T L+
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414
Query: 367 LASISKVAEA-NELIGLMKKRFPKSGDMWNAAL 398
L ++ EA L+ +MKK + +NA +
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F ++ G+ S+ A +L+ C +++ G +PN T+N +I
Sbjct: 74 AISLFTQLQSKGISPSI-ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTII 132
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC +G + + + +G L+ G K + + +LQ MEK +
Sbjct: 133 NGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQ 192
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y+ I LCK +A L + RGI + TY LI G G + +L
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL 252
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M +PD Y F + LC+ G A V +G P T +L+ G S
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312
Query: 370 ISKVAEANELIGLMKKR 386
V EA EL M KR
Sbjct: 313 RENVHEARELFNRMVKR 329
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 132/326 (40%), Gaps = 40/326 (12%)
Query: 63 CGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG 122
C +L P +++ + L + + + +LL+E+ +++ L
Sbjct: 362 CNKNLVPTIA----SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ +++ A+ M K G++ ++ NA++ G L N K IF K G+EP+
Sbjct: 418 EGRILE-ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK-SGLEPDI 475
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN +I +C++ + EMR K++ P+ + L+ G + V ++L
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL---------------------------- 274
M G + V YNI + + CK + ++A +L
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 275 ------LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
L +L G PN+ TY LI+ K+G+ A L + M + PD+ F +
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 329 TYFLCQGGEYETALKVCRASMAKGWV 354
L Q E + A K+ +A+G V
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARGLV 681
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 94/226 (41%), Gaps = 1/226 (0%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+N ++ F +V+ P S ++K++ + G + S+ +++ K I P+
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTS-VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIAT 92
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ ++ + +L + K G + +N I C +A +L
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
++G + TY LI+G K G ++ A L M +P+ + LC+ G
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVS 212
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
AL +C +G + T SL+ G S+ + E +L+ M +
Sbjct: 213 DALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 8/309 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
DR+ V+ + N + L++ E+ +PD+ + S+ + ++ A
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI-IDSLC---KTKRVNDA 209
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F+E+++ G+R +V AL+ G S + + R+ ++ K I PN TY+ ++
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK-KKITPNVITYSALLD 268
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+F ++G + EM R SI P+ + L+ G + ++ ++ +M G +
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN I CK KR E+ L M RG+ N TY LI GF + G+++ A++ F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M G PD + + + LC GE E AL + + T +++ G+
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 371 SKVAEANEL 379
KV EA L
Sbjct: 449 GKVEEAWSL 457
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 10/317 (3%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMD 138
A+ KL + + ++ + +E L R DL + +IV+ + + A+ +M
Sbjct: 94 AIVKLKKYDVVISLGKKMEVLGIRNDL------YTFNIVINCFCCCFQVSLALSILGKML 147
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K G + +L+ G + + + ++ G +P+ YN +I S C++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI-GYKPDIVAYNAIIDSLCKTKRV 206
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ + E+ RK IRPN + L+ G ++ D ++L M K I V Y+
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ + K + EAK L + M+ I P++ TY L++G ++ A ++F M + GC
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGC 326
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
D + C+ E +K+ R +G V + T +L+ G V +A E
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 379 LIGLMKKRFPKSGDMWN 395
M F S D+W
Sbjct: 387 FFSQM-DFFGISPDIWT 402
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 1/191 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A Q F+ M G V + N L+ G +K E+ ++F E + G+ N+ TYN
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYN 369
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ F ++GD ++M I P+ + +LL G + E + + M+K
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + Y I+ +CK + EEA +L + +G+KP++ TY ++ G +G L
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Query: 307 KKLFASMTNGG 317
+ L+ M G
Sbjct: 490 EALYTKMKQEG 500
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+ ++M + P+ DF LL+ K KY+ V + + ME GI + + +NI I C
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC 131
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+ A ++L ML G +P+ T L++GF + + A L M G +PD
Sbjct: 132 CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIV 191
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ LC+ A + KG P+ T +LV GL + S+ ++A L+ M
Sbjct: 192 AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 384 KKR 386
K+
Sbjct: 252 IKK 254
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 121/260 (46%), Gaps = 5/260 (1%)
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++EM + ++ +V N ++ + + + + + KVYG PN +YN +I +
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM-KVYGCSPNVVSYNTLIDGY 268
Query: 193 CESGDSSSVY---SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G + +Y ++L EM + PN T F +L+ GF+K+ KV + M +
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I LC + EA ++ D M+S G++PNL TY LI+GF K L+ A +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F S+ G P + + M C+ G+ + + +G VP T L+ GL
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 370 ISKVAEANELIG-LMKKRFP 388
+ A +L L K P
Sbjct: 449 NGNIEAAKKLFDQLTSKGLP 468
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 132/312 (42%), Gaps = 6/312 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
F++ ++ L + N ++E++K P++ L G M A
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY-KADAV 283
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM + + ++ N L+ G N ++F E ++PN +YN +I C
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLD-QDVKPNVISYNSLINGLC 342
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G S S+ +M ++PN + L+ GF K ++ + ++ G
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN+ I + CKL + ++ AL + M GI P++ TY LI G + GN+E AKKLF +
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
T+ G PD F + C+ GE A + + G P T ++ G +
Sbjct: 463 TSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 374 AEANELIGLMKK 385
A + M+K
Sbjct: 522 KAATNMRTQMEK 533
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 3/181 (1%)
Query: 112 RFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
R + I Y + ID EEM++ G+ V N L+ G + N E K++F +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G+ P+ T++ +++ +C G+S +L EM + ++P + +++ G+ KE
Sbjct: 462 LTS-KGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 232 KYEDVGKVLQMMEK-CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+ + MEK + V YN+ +Q + + E+A LL+ ML +G+ PN TY
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Query: 291 K 291
+
Sbjct: 580 E 580
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 83/200 (41%), Gaps = 38/200 (19%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK---------- 272
L+ KE++ DV V + M + I V +N+ I +LCK + +A+
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 273 ---------ALLDG-------------------MLSRGIKPNLDTYKHLIHGFGKEGNLE 304
L+DG M+ + PNL T+ LI GF K+ NL
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
G+ K+F M + +P+ + LC GG+ A+ + ++ G P+ T +L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 365 TGLASISKVAEANELIGLMK 384
G + EA ++ G +K
Sbjct: 374 NGFCKNDMLKEALDMFGSVK 393
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 153/364 (42%), Gaps = 35/364 (9%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
A +K + NP + L+I + + + KL F A+ ++L E + D
Sbjct: 12 AVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNID 71
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
E ++ ++ YG+ I A+ FE MD + SV + NA++ + + +++
Sbjct: 72 NGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAH 131
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+++ + GI P+ T+ +KSFC + + +L M + +A + ++ G
Sbjct: 132 KVYMRM-RDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGG 190
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
FY+E+ + ++ + M GI + +N I +LC+ +E++ LL+ +L RG+ PN
Sbjct: 191 FYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPN 250
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFAS---------------------------------- 312
L T I GF + L A +L
Sbjct: 251 LFTVNIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRK 310
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M N G EPD + + C+ G + A ++ R KG+VP ST SL+ GL
Sbjct: 311 MVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGD 370
Query: 373 VAEA 376
+ A
Sbjct: 371 IDRA 374
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 123/302 (40%), Gaps = 47/302 (15%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALL-----LGCILSKNYEEVKRIFTEFPKVYG 177
Q +I A++ EM + G + N ++ +GC+ + + I G
Sbjct: 402 QQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI------AKG 455
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ T+N +I +C+ + I+ M + P+ + +L G K KYEDV
Sbjct: 456 HLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVM 515
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++M + G + YNI +S CK ++ EEA L++ M ++G+ P++ + L+ GF
Sbjct: 516 GTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGF 575
Query: 298 GKEGNLEGA------------------------------------KKLFASMTNGGCEPD 321
G+L+GA +KLF M G PD
Sbjct: 576 CDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPD 635
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
SY + + C+ G + + KG +P +T ++ L +V EA +I
Sbjct: 636 SYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIH 695
Query: 382 LM 383
LM
Sbjct: 696 LM 697
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 150/367 (40%), Gaps = 60/367 (16%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL 120
G + P D MAF+ + L + H +LL ++ R P+L F I
Sbjct: 209 GLGICP----DIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIF----IQG 260
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV------KRIFTEFPK 174
+ Q M++ A++ + + + GL V N L+ C L KN++ V +++ E
Sbjct: 261 FCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLI--CGLCKNFKVVEAEHYLRKMVNE--- 314
Query: 175 VYGIEPNSETYNKVIKSFC-----------------------------------ESGDSS 199
G EP+ TYN +I +C + GD
Sbjct: 315 --GYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDID 372
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
++ E K ++PN L+ G ++ K++ M + G + + YN+ I
Sbjct: 373 RAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVI 432
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
LCK+ +A L+ +++G P++ T+ LI G+ K+ L+ A ++ M N G
Sbjct: 433 NGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVS 492
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + LC+ G+YE + + M KG VP+ T L KV EA L
Sbjct: 493 PDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNL 552
Query: 380 IGLMKKR 386
I M+ +
Sbjct: 553 IEEMQNK 559
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 2/230 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D+A++ + M +G+ V N++L G + YE+V F + G PN TYN
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME-KGCVPNIITYN 534
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM-EK 245
+ +SFC++ +++ EM+ K + P+ +FG L+ GF + ++ + + E+
Sbjct: 535 ILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+ + YNI I + A+ L + M G P+ TY+ +I GF K GN+
Sbjct: 595 YKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINS 654
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G P F LC A+ + + KG VP
Sbjct: 655 GYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP 704
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 132/311 (42%), Gaps = 9/311 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEE---LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+A+ + + NH +L EE L PD+ + +H++ G + + +
Sbjct: 182 VAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKL-IHTLCRKGH---VQESER 237
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++ K G+ ++ +N + G E R+ + G+ P+ TYN +I
Sbjct: 238 LLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGR--GLTPDVITYNTLICGL 295
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++ L +M + P+ + ++ G+ K ++ ++L+ G
Sbjct: 296 CKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDE 355
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y I LC+ + A + + + +G+KPNL L+ G ++G + A KL
Sbjct: 356 STYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNE 415
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M+ GC PD + + + LC+ G A + ++AKG +P T +L+ G K
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475
Query: 373 VAEANELIGLM 383
+ A E++ M
Sbjct: 476 LDNAIEIVDRM 486
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 69/167 (41%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A ++ A+ EEM GL V L+ G + + + ++F + Y
Sbjct: 540 FCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSH 599
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
TYN +I +F + + + +M P++ + +++ GF K L
Sbjct: 600 TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFL 659
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ + G+ + + + LC +R EA ++ M+ +GI P +
Sbjct: 660 LVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEV 706
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 5/296 (1%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
A + L+E L+ R LR N + I Y +A ++ A + F EM G+ +V AL
Sbjct: 505 ARTYLMEMLERR--LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 562
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G N E +F F + + +TY+ +I +G + I +E++ K
Sbjct: 563 IEGHCKEGNVTEAFSVF-RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+ PNA + L++G K+ + ++L+ M GI + YNI I LCK E AK
Sbjct: 622 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 681
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L D + RG+ PN TY ++ G+ K N A +L M G PD++ + + F
Sbjct: 682 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 741
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI-GLMKKRF 387
C+ ++E AL + + + KG+ S +L+ G K+ EAN L+ +++K+F
Sbjct: 742 CKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQF 796
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A++ +EM + G+ + L+ G +N + E K + P
Sbjct: 358 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK-RKLAPTV 416
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ +I C G+ +IL EM ++PNA + L+ KE + E+ +L+
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI V YN I CK KR EEA+ L ML R ++PN TY I G+ K G
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 536
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A + F M + G P+ + C+ G A V R +++ + T
Sbjct: 537 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 596
Query: 363 LVTGLASISKVAEA 376
L+ GL+ K+ EA
Sbjct: 597 LIHGLSRNGKMHEA 610
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 6/315 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +S+ + + + +LL+E+K R + +S+++ G + +
Sbjct: 380 DSQTYSLLIEGHCRGQNMARAFELLDEMKKR---KLAPTVLTYSVIINGLCRCGNLQGTN 436
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
EM GL+ + L+ EE R+ E + GI P+ YN +I
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE-SRMILERMREQGILPDVFCYNSLIIG 495
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC++ + L EM + +RPNA +G + G+ K + E + M CG+
Sbjct: 496 FCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V +Y I+ CK EA ++ +LSR + ++ TY LIHG + G + A +F+
Sbjct: 556 VGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFS 615
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ G P+++ + C+ G + A ++ KG P T L+ GL
Sbjct: 616 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 675
Query: 372 KVAEANELIGLMKKR 386
++ A L ++ R
Sbjct: 676 EIERAKNLFDDIEGR 690
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 148/349 (42%), Gaps = 46/349 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +S+ + LS+ + + EL+ + L F +S++ Q N +D A
Sbjct: 590 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN--AFTYNSLISGSCKQGN-VDKAS 646
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q EEM G+ + N L+ G + E K +F + + G+ PN TY ++
Sbjct: 647 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI-EGRGLTPNCVTYAAMVDG 705
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C+S + ++ + +L EM + + P+A + ++L KE K+E + Q M + G AS
Sbjct: 706 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST 765
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLS------------------------------- 280
V+ +N I+ CK + +EA LL+ M+
Sbjct: 766 VS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 824
Query: 281 ----RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
R + P TY L+HG+ GN+ LF M G EPD +++ C+ G
Sbjct: 825 EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 884
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A K+ + KG +P S + GL + S +A ++ G M +
Sbjct: 885 NVMEACKLKDEILVKG-MPMKSGFR---LGLPTCSVIARGFQIAGNMDE 929
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 2/275 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++D A++ M GL + + L+ G + K E K + E V G++P
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDV-GLKPEP 311
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I F GD + I EM I N + LL G K K E +++Q
Sbjct: 312 ITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 371
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G+ Y++ I+ C+ + A LLD M R + P + TY +I+G + GN
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 431
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+G + M G +P++ + + G E + + +G +P S
Sbjct: 432 LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNS 491
Query: 363 LVTGLASISKVAEANE-LIGLMKKRFPKSGDMWNA 396
L+ G ++ EA L+ ++++R + + A
Sbjct: 492 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM GL+ NAL+ G + + E+ RI E GIE N +N ++ C++
Sbjct: 301 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC-GIEANLIIWNTLLNGVCKA 359
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G I+ EM K + P++ + LL+ G + ++L M+K +A V Y
Sbjct: 360 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 419
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
++ I LC+ + A+L M+ G+KPN Y L+ KEG +E ++ + M
Sbjct: 420 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 479
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G PD +C+ C+ E A + + P+ T + + G + ++
Sbjct: 480 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 539
Query: 376 AN 377
A+
Sbjct: 540 AD 541
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 113/265 (42%), Gaps = 23/265 (8%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL 120
G L P + ++ V ++ + A QLLEE+ R PD +++++L
Sbjct: 689 GRGLTPNC----VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDA------FIYNVIL 738
Query: 121 Y--GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+ + A+ F+EM + G +V + N L+ G S +E + E + I
Sbjct: 739 NFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 797
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN TY +I C++G + EM+ +++ P A + LL G++ +V
Sbjct: 798 -PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 856
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI------KPNLDTYKH 292
+ + M GI Y + I + C+ EA L D +L +G+ + L T
Sbjct: 857 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSV 916
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGG 317
+ GF GN++ A ++ SM G
Sbjct: 917 IARGFQIAGNMDEAAEVLRSMVKFG 941
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 127/346 (36%), Gaps = 75/346 (21%)
Query: 115 VHSIVLYGQANMIDHAMQTF----EEMDKYGLRQSVDALNAL---------------LLG 155
+ S++L Q + F +M +Q +D L+AL L+
Sbjct: 66 IRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIK 125
Query: 156 CILSKNYEEVKRIFTEFPKVY---GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
CI+ +N + + K Y PNS ++ ++ S+ + G ++ +
Sbjct: 126 CII-RNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE 184
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
RP+ LL K +K E KV M + V Y I + CK+ ++AK
Sbjct: 185 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 244
Query: 273 A----------LLD-------GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
LLD M+ +G+ P+L TY LI+GF E AK + M +
Sbjct: 245 RVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 304
Query: 316 GGCEPDSYCF------FM-----------------------------FTYFLCQGGEYET 340
G +P+ + FM +C+ G+ E
Sbjct: 305 VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEK 364
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
AL++ + M KG P T L+ G +A A EL+ MKKR
Sbjct: 365 ALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 410
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 5/296 (1%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
A + L+E L+ R LR N + I Y +A ++ A + F EM G+ +V AL
Sbjct: 514 ARTYLMEMLERR--LRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 571
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G N E +F F + + +TY+ +I +G + I +E++ K
Sbjct: 572 IEGHCKEGNVTEAFSVF-RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+ PNA + L++G K+ + ++L+ M GI + YNI I LCK E AK
Sbjct: 631 LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L D + RG+ PN TY ++ G+ K N A +L M G PD++ + + F
Sbjct: 691 NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 750
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI-GLMKKRF 387
C+ ++E AL + + + KG+ S +L+ G K+ EAN L+ +++K+F
Sbjct: 751 CKEEKFEKALDLFQEMLEKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQF 805
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A++ +EM + G+ + L+ G +N + E K + P
Sbjct: 367 KAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK-RKLAPTV 425
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ +I C G+ +IL EM ++PNA + L+ KE + E+ +L+
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI V YN I CK KR EEA+ L ML R ++PN TY I G+ K G
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A + F M + G P+ + C+ G A V R +++ + T
Sbjct: 546 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 605
Query: 363 LVTGLASISKVAEA 376
L+ GL+ K+ EA
Sbjct: 606 LIHGLSRNGKMHEA 619
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + A+ F + R S+ + N+LL G +L N E+ + + + P
Sbjct: 155 YRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLL-GDLLKGNKVELFWKVFDGMCAHKVLP 213
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I + C+ G+ +L EM K PN + +++ G + ++ ++
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELK 273
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M G+ + Y+I I C KRS EAK +L M+ G+KP TY LI GF ++
Sbjct: 274 RSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQ 333
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++E A ++ M G E + + +C+ G+ E AL++ + M KG P T
Sbjct: 334 GDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY 393
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
L+ G +A A EL+ MKKR
Sbjct: 394 SLLIEGHCRGQNMARAFELLDEMKKR 419
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 6/315 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +S+ + + + +LL+E+K R + +S+++ G + +
Sbjct: 389 DSQTYSLLIEGHCRGQNMARAFELLDEMKKR---KLAPTVLTYSVIINGLCRCGNLQGTN 445
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
EM GL+ + L+ EE R+ E + GI P+ YN +I
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEE-SRMILERMREQGILPDVFCYNSLIIG 504
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC++ + L EM + +RPNA +G + G+ K + E + M CG+
Sbjct: 505 FCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 564
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V +Y I+ CK EA ++ +LSR + ++ TY LIHG + G + A +F+
Sbjct: 565 VGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFS 624
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ G P+++ + C+ G + A ++ KG P T L+ GL
Sbjct: 625 ELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAG 684
Query: 372 KVAEANELIGLMKKR 386
++ A L ++ R
Sbjct: 685 EIERAKNLFDDIEGR 699
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 149/347 (42%), Gaps = 17/347 (4%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNER 112
+++ D C + P D ++ +S + + ++L E+ + P+L
Sbjct: 200 WKVFDGMCAHKVLP----DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLV---- 251
Query: 113 FHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+++++ G +A ++D A++ M GL + + L+ G + K E K +
Sbjct: 252 --TYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLL 309
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E V G++P TYN +I F GD + I EM I N + LL G K
Sbjct: 310 EMIDV-GLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKA 368
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K E +++Q M + G+ Y++ I+ C+ + A LLD M R + P + TY
Sbjct: 369 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+I+G + GNL+G + M G +P++ + + G E + +
Sbjct: 429 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANE-LIGLMKKRFPKSGDMWNA 396
+G +P SL+ G ++ EA L+ ++++R + + A
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 156/376 (41%), Gaps = 57/376 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +S+ + LS+ + + EL+ + L F +S++ Q N +D A
Sbjct: 599 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPN--AFTYNSLISGSCKQGN-VDKAS 655
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q EEM G+ + N L+ G + E K +F + + G+ PN TY ++
Sbjct: 656 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDI-EGRGLTPNCVTYAAMVDG 714
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C+S + ++ + +L EM + + P+A + ++L KE K+E + Q M + G AS
Sbjct: 715 YCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAST 774
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLS------------------------------- 280
V+ +N I+ CK + +EA LL+ M+
Sbjct: 775 VS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWL 833
Query: 281 ----RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
R + P TY L+HG+ GN+ LF M G EPD +++ C+ G
Sbjct: 834 EMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREG 893
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLAS----------ISKVAEANELIGL---- 382
A K+ + KG + +L+ L ++++ E+ +GL
Sbjct: 894 NVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCS 953
Query: 383 -MKKRFPKSGDMWNAA 397
+ + F +G+M AA
Sbjct: 954 VIARGFQIAGNMDEAA 969
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM GL+ NAL+ G + + E+ RI E GIE N +N ++ C++
Sbjct: 310 EMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC-GIEANLIIWNTLLNGVCKA 368
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G I+ EM K + P++ + LL+ G + ++L M+K +A V Y
Sbjct: 369 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
++ I LC+ + A+L M+ G+KPN Y L+ KEG +E ++ + M
Sbjct: 429 SVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE 488
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
G PD +C+ C+ E A + + P+ T + + G
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 117/294 (39%), Gaps = 52/294 (17%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL 120
G L P + ++ V ++ + A QLLEE+ R PD +++++L
Sbjct: 698 GRGLTPNC----VTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDA------FIYNVIL 747
Query: 121 Y--GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+ + A+ F+EM + G +V + N L+ G S +E + E + I
Sbjct: 748 NFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN TY +I C++G + EM+ +++ P A + LL G++ +V
Sbjct: 807 -PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 865
Query: 239 VLQ--------------------------MMEKC---------GIASGVNVYNIRIQSLC 263
+ + +ME C G+ V Y+ IQ+LC
Sbjct: 866 LFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALC 925
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
K + E LL+ + G + L T + GF GN++ A ++ SM G
Sbjct: 926 KKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 23/284 (8%)
Query: 115 VHSIVLYGQANMIDHAMQTF----EEMDKYGLRQSVDALNAL---------------LLG 155
+ S++L Q + F +M +Q +D L+AL L+
Sbjct: 57 IRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIK 116
Query: 156 CILSKNYEEVKRIFTEFPKVY---GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
CI+ +N + + K Y PNS ++ ++ S+ + G ++ +
Sbjct: 117 CII-RNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFE 175
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
RP+ LL K +K E KV M + V Y I + CK+ ++AK
Sbjct: 176 FRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAK 235
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
+L M +G PNL TY +I G + L+ A +L SM + G PD Y + +
Sbjct: 236 RVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGF 295
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
C A + + G P T +L+ G + +A
Sbjct: 296 CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 339
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 8/230 (3%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
KL +ANH LLEE+ + N + I +A M+ A + + EM + +
Sbjct: 789 KLQEANH------LLEEMIEK-QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 841
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
+ +LL G N EV +F E GIEP+ TY +I ++C G+
Sbjct: 842 PTAKTYTSLLHGYHNIGNMSEVSALFEEMV-AKGIEPDKMTYYVMIDAYCREGNVMEACK 900
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+ E+ K + + + L+ K+ ++ +V K+L + + G G+ ++ +
Sbjct: 901 LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQ 960
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+EA +L M+ G N + L+ G N E + L M
Sbjct: 961 IAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 144/316 (45%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D +++ +S S+AN ++ +Q+ + +++R PD+ + S+ G+ ++ A
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDV-VTYNIMIGSLCSRGK---LELA 185
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +E+ K G + SV L+ IL E +F E G+ P+ TYN +I+
Sbjct: 186 FEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVS-RGLRPDLYTYNAIIR 244
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ G + + + P+ + +LL F + ++ED ++++ M G
Sbjct: 245 GICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP 304
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V ++I I S C+ R EA +L+ M +G+ P+ +Y LI F KEG L+ A +
Sbjct: 305 NVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYL 364
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + GC PD + LC+ G + AL V G P ++ + L S
Sbjct: 365 EKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSC 424
Query: 371 SKVAEANELIGLMKKR 386
+A E+I M ++
Sbjct: 425 GNKIKALEMISEMIRK 440
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 136/319 (42%), Gaps = 4/319 (1%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMI 127
P P R + SI + S H ++ E + P+L + + + +A
Sbjct: 20 PTIPQSR-SDSIPACRFSNKTHLRNVTSSAEFRQPHFPNLDNRDAHLMKLLNRSCRAGKH 78
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ ++ E + G + V L+ G S+N ++ R+ E + YG +P+ +YN
Sbjct: 79 NESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETYG-DPDVYSYNA 136
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I F ++ S + MR + P+ + +++ K E +V+ + K G
Sbjct: 137 MISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDG 196
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V Y I I++ R EA L D ++SRG++P+L TY +I G KEG + A
Sbjct: 197 CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRAL 256
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++ GC PD + + +E ++ + + G P+ T L++
Sbjct: 257 DFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSF 316
Query: 368 ASISKVAEANELIGLMKKR 386
+V EA ++ +MK++
Sbjct: 317 CREGRVREAVNVLEVMKEK 335
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 136/316 (43%), Gaps = 12/316 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ ++I + N +L +EL +R PDL + ++ ++ G + M D A
Sbjct: 202 ITYTILIEATILEGRINEALELFDELVSRGLRPDL------YTYNAIIRGICKEGMEDRA 255
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + G V + N LL + +E+ +R+ + + G EPN T++ +I
Sbjct: 256 LDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDM-VLSGCEPNVVTHSILIS 314
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
SFC G ++L M+ K + P++ + L++ F KE + + + L+ M G
Sbjct: 315 SFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLP 374
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN + +LCK ++ A + + + G P + Y + GN A ++
Sbjct: 375 DIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMI 434
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M G +PD + LC+ G + A+ + A + P + ++ G+
Sbjct: 435 SEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKA 494
Query: 371 SKVAEANELIGLMKKR 386
+V E EL+ M ++
Sbjct: 495 HRVFEGIELLITMVEK 510
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 12/244 (4%)
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
SI +S + +LE +K + L + + I + + +D A++ E+M
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEK-GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368
Query: 139 KYGLRQSVDALNALL-----LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
G + N +L GC + +F + +V G P YN + +
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCA-----DLALDVFEKLDEV-GCPPTVRAYNTMFSALW 422
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G+ +++EM RK I P+ + L++ ++ ++ +L ME V
Sbjct: 423 SCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVI 482
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+NI + +CK R E LL M+ +G PN +Y LI G G A +L S+
Sbjct: 483 SFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSL 542
Query: 314 TNGG 317
G
Sbjct: 543 YRLG 546
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 2/311 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD + ++ + + ++QLL ++ + F++ L + +++ A
Sbjct: 228 LDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILE-AQG 286
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M K G + + NAL+ G +N E + +F K G+EP+ YN +I +
Sbjct: 287 VLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK-RGLEPDVLNYNVLIDGY 345
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++ + E+ K++ P + L+ G + V K+L M V
Sbjct: 346 CKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV 405
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YNI I +LCK R EA +L M+ +G+KPN+ TY ++ G+ N+ AK +F
Sbjct: 406 VTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNR 465
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G EPD + + C+ + A+ + + K +P ++ SL+ GL ++ +
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 373 VAEANELIGLM 383
+ EL+ M
Sbjct: 526 IPHVQELLDEM 536
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 147/335 (43%), Gaps = 13/335 (3%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNER 112
F+ LD C LA D+ + ++ LS+ A LL+E++ +P+L
Sbjct: 142 FKALDFCQNL-LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV---- 196
Query: 113 FHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
++S ++ G + + A+ ++ + G+ N+L+ GC ++EV ++ T
Sbjct: 197 --MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLT 254
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
+ + ++P+ T+N +I + C+ G +LA M ++ +P+ + L+ G+
Sbjct: 255 KMVR-ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR 313
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+ ++ M K G+ V YN+ I CK K +EA L + ++ + P + +Y
Sbjct: 314 ENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASY 373
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI G G + KKL M PD + + LC+ G AL V M
Sbjct: 374 NSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMK 433
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
KG P+ T +++ G + V A ++ M K
Sbjct: 434 KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 2/258 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + M+D AM F+E+ L ++ + N+L+ G S VK++ E P
Sbjct: 345 YCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM-HGSAQPP 403
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I + C+ G +L M +K ++PN + ++ G+ + +
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M K G+ + YN+ I CK + +EA L M + + P++ +Y LI G
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNL 523
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + ++L M + G PD + + C+ ++ A+ + R + W P F T
Sbjct: 524 GRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTN 582
Query: 361 KSLVTGLASISKVAEANE 378
++V L K+ A +
Sbjct: 583 HAIVDNLCKGEKLKMAED 600
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 2/273 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ +EM+K ++ ++ +AL+ G + + ++ + GI ++ TYN
Sbjct: 176 IKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGE-RGILLDAVTYN 234
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G V +L +M R+++ P+ F +L+ KE + + VL MM K
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN ++ C + EA+ L + M+ RG++P++ Y LI G+ K ++ A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF + N P + LC G K+ P T L+
Sbjct: 355 MVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDA 414
Query: 367 LASISKVAEA-NELIGLMKKRFPKSGDMWNAAL 398
L ++ EA L+ +MKK + +NA +
Sbjct: 415 LCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F ++ G+ S+ A +L+ C +++ G +PN T+N +I
Sbjct: 74 AISLFTQLQSKGISPSI-ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTII 132
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC +G + + + +G L+ G K + + +LQ MEK +
Sbjct: 133 NGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQ 192
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y+ I LCK +A L + RGI + TY LI G G + +L
Sbjct: 193 PNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQL 252
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M +PD Y F + LC+ G A V +G P T +L+ G S
Sbjct: 253 LTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312
Query: 370 ISKVAEANELIGLMKKR 386
V EA EL M KR
Sbjct: 313 RENVHEARELFNRMVKR 329
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 132/326 (40%), Gaps = 40/326 (12%)
Query: 63 CGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG 122
C +L P +++ + L + + + +LL+E+ +++ L
Sbjct: 362 CNKNLVPTIA----SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCK 417
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ +++ A+ M K G++ ++ NA++ G L N K IF K G+EP+
Sbjct: 418 EGRILE-ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK-SGLEPDI 475
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN +I +C++ + EMR K++ P+ + L+ G + V ++L
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL---------------------------- 274
M G + V YNI + + CK + ++A +L
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKL 595
Query: 275 ------LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
L +L G PN+ TY LI+ K+G+ A L + M + PD+ F +
Sbjct: 596 KMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEII 655
Query: 329 TYFLCQGGEYETALKVCRASMAKGWV 354
L Q E + A K+ +A+G V
Sbjct: 656 IGVLLQRNETDKAEKLREEMIARGLV 681
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 94/226 (41%), Gaps = 1/226 (0%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+N ++ F +V+ P S ++K++ + G + S+ +++ K I P+
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTS-VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIAT 92
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ ++ + +L + K G + +N I C +A +L
Sbjct: 93 FTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLL 152
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
++G + TY LI+G K G ++ A L M +P+ + LC+ G
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVS 212
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
AL +C +G + T SL+ G S+ + E +L+ M +
Sbjct: 213 DALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 141/324 (43%), Gaps = 33/324 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++ I V L + F + L E++ D + + Y +AN+ A++ F+
Sbjct: 110 SYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDR 169
Query: 137 MDKYGLRQSVDALNALLLGCILSKN-------YEEVKRIFTEFPKVYGI----------- 178
M ++GL+ ++D L+ LL K+ ++ VK F K Y I
Sbjct: 170 MVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGES 229
Query: 179 ---------------EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+ YN ++++FC+ G S Y + EM I+P+A F +
Sbjct: 230 VSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIF 289
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ + + + +VL M++ + V YN I+ LCK ++ EEA LL+ ++ R
Sbjct: 290 IRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSG 349
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+P+ +Y ++ + + A +L + M C PD + + M L + G ++ A++
Sbjct: 350 QPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIE 409
Query: 344 VCRASMAKGWVPHFSTMKSLVTGL 367
V + KG+ P ST +V GL
Sbjct: 410 VWESMGEKGFYPSVSTYSVMVHGL 433
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + + A + F EM G++ + + + + R+ E K Y + P
Sbjct: 258 FCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEM-KRYDLVP 316
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +IK C+ Y +L E+ +S +P+A + +LA + + +++
Sbjct: 317 NVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLI 376
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF-GK 299
M K + YN+ ++ L ++ R + A + + M +G P++ TY ++HG K
Sbjct: 377 SRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKK 436
Query: 300 EGNLEGAKKLFASMTNGGCEPDS 322
+G LE A K F M + G P S
Sbjct: 437 KGKLEEACKYFEMMIDEGIPPYS 459
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 40/267 (14%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS---IRPNATDFGL 222
+R F ++ G + + E+Y+ ++ S + ++ L E+R I P F L
Sbjct: 92 QRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQV--FWL 149
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD------ 276
+ + + + D + M + G+ ++ + + LCK K ++ A+ + D
Sbjct: 150 VFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQF 209
Query: 277 -------GMLSRG---------------------IKPNLDTYKHLIHGFGKEGNLEGAKK 308
+L RG ++ Y L+ F K G + A K
Sbjct: 210 QTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYK 269
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+F M + G +PD+ F +F C+ + A +V VP+ T ++ L
Sbjct: 270 MFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLC 329
Query: 369 SISKVAEANELIGLMKKRFPKSGDMWN 395
KV EA +L+ + +R D W+
Sbjct: 330 KKEKVEEAYQLLNEIIER-SGQPDAWS 355
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 38/213 (17%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D FSI + +AN + ++L+E+K
Sbjct: 282 DACTFSIFIRAYCEANDIHLAYRVLDEMK------------------------------- 310
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+Y L +V N ++ + EE ++ E + G +P++ +YN ++ C
Sbjct: 311 -----RYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSG-QPDAWSYNAILAYHC 364
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
E + +S +++ M + + P+ + +LL + +++ +V + M + G V+
Sbjct: 365 EHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVS 424
Query: 254 VYNIRIQSLCKLK-RSEEAKALLDGMLSRGIKP 285
Y++ + LCK K + EEA + M+ GI P
Sbjct: 425 TYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPP 457
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 157/332 (47%), Gaps = 13/332 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
LD +F I + +A LL EL+ + + +++ ++ G + I+ A
Sbjct: 161 LDVYSFGIVIKGCCEAGEIEKSFDLLVELR---EFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV--YGIEPNSETYNKV 188
F EM K+GL + L+ G L KN + K+ F + K+ +G+ PN TYN V
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHG--LFKNGIK-KQGFEMYEKMQEHGVFPNLHTYNCV 274
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+ G + + + EMR + + N + L+ G +E K + +V+ M+ GI
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGI 334
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I C +++ +A +L + SRG+ P+L TY L+ GF K+G+ GA K
Sbjct: 335 NPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGL 367
+ M G +P + + + E A+++ R+SM + G P T L+ G
Sbjct: 395 VVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL-RSSMEELGLTPDVHTYSVLIHGF 453
Query: 368 ASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
++ EA+ L +++K+F + ++N +
Sbjct: 454 CIKGRMNEASRLFKSMVEKKFEPNEVIYNTMV 485
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 116/254 (45%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM + G+ ++ N L+ G E + + K GI PN TYN +I
Sbjct: 287 AFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM-KSDGINPNLITYNTLI 345
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC S+ +++ + + P+ + +L++GF K+ GKV++ ME+ GI
Sbjct: 346 DGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I I + + E+A L M G+ P++ TY LIHGF +G + A +L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F SM EP+ + C+ G AL++ R K P+ ++ + ++ L
Sbjct: 466 FKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525
Query: 370 ISKVAEANELIGLM 383
K EA L+ M
Sbjct: 526 ERKSKEAEGLVEKM 539
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 133/339 (39%), Gaps = 34/339 (10%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+S Q+ F + S LL L + R + I Y Q+ +D ++ F EM
Sbjct: 65 VISGKIQSQFFTS-SSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDK 123
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTE-----------FPKV-------------- 175
G + N LL + S ++ + F E F V
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183
Query: 176 --------YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+G PN Y +I C+ G+ + EM + + N + +L+ G
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+K + ++ + M++ G+ ++ YN + LCK R+++A + D M RG+ N+
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNI 303
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LI G +E A ++ M + G P+ + C + AL +CR
Sbjct: 304 VTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRD 363
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
++G P T LV+G + A +++ M++R
Sbjct: 364 LKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 74/182 (40%), Gaps = 35/182 (19%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+ P+ TYN ++ FC+ GD+S ++ EM + I+P+ + +L+ F +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------- 286
E ++ ME+ G+ V+ Y++ I C R EA L M+ + +PN
Sbjct: 425 EKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTM 484
Query: 287 ----------------------------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ +Y+++I KE + A+ L M + G
Sbjct: 485 VLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGI 544
Query: 319 EP 320
P
Sbjct: 545 GP 546
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + +EM++ G++ S L+ S N E+ ++ + ++ G+ P+ TY+ +I
Sbjct: 392 AGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEEL-GLTPDVHTYSVLI 450
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G + + M K PN + ++ G+ KE ++ + ME+ +
Sbjct: 451 HGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
V Y I+ LCK ++S+EA+ L++ M+ GI P+ D+ +LI
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS-DSILNLI 554
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 9/312 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
D M+++ V+ + +L+ + PD + ++ ++ G D+A+
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDT------YTYNTLIRGLCGRGRTDNAL 172
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
++M + G V LL Y++ ++ E + G P+ TYN V+
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM-RDKGCAPDIVTYNVVVNG 231
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G L + PN + ++L G ++ED K++ M + G
Sbjct: 232 ICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPN 291
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V +N+ I LC+ E A +LD + G PN +Y ++H F K+ ++ A
Sbjct: 292 VVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 351
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + GC PD + LC+GGE + A+++ KG P + +++ GL
Sbjct: 352 LMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 411
Query: 372 KVAEANELIGLM 383
K EA EL+ M
Sbjct: 412 KTEEALELLNEM 423
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 145/324 (44%), Gaps = 6/324 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + +++ V+ + Q + +E LK+ P ++IVL G A + A
Sbjct: 221 DIVTYNVVVNGICQEGR---VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 277
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM + G +V N L+ E I + PK YG PNS +YN ++ +
Sbjct: 278 KLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPK-YGCTPNSLSYNPILHA 336
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ + + M P+ + LL + + + ++L ++ G
Sbjct: 337 FCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 396
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I L K ++EEA LL+ M+++G++P++ TY + G +EG +E A K F
Sbjct: 397 LISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFC 456
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G P++ + LC+ +A+ + ++ G +P+ ST L+ GLA
Sbjct: 457 KVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEG 516
Query: 372 KVAEANELIGLMKKRFPKSGDMWN 395
V EA E++ + R S + N
Sbjct: 517 LVKEAREMMAELCSRGVVSKTLVN 540
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 7/218 (3%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
EP+ +YN ++ +C +G + ++A M + P+ + L+ G + ++
Sbjct: 117 EPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTYNTLIRGLCGRGRTDNALA 173
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
VL M + G V Y I +++ CK ++A LLD M +G P++ TY +++G
Sbjct: 174 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGIC 233
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+EG ++ A + S+ + GCEP++ + + LC +E A K+ KG P+
Sbjct: 234 QEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNA 396
T L++ L V A E++ + PK G N+
Sbjct: 294 TFNMLISFLCRRGLVEPAMEIL----DQIPKYGCTPNS 327
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 9/211 (4%)
Query: 177 GIEPNSE-TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+EP++ +IK C SG ++ +LA S P+ + ++AG+ + ++
Sbjct: 84 GLEPSAAGPCAALIKKLCASGRTAEARRVLA-----SCEPDVMSYNAMVAGYCVTGQLDN 138
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+++ M + YN I+ LC R++ A A+LD ML RG P++ TY L+
Sbjct: 139 ARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLE 195
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K + A KL M + GC PD + + +CQ G + A++ ++ + G P
Sbjct: 196 ATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEP 255
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + ++ GL + + +A +L+ M ++
Sbjct: 256 NTVSYNIVLKGLCTAERWEDAEKLMAEMSRK 286
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 10/250 (4%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELK----TRPDLRQNERFHVHSIVLYGQANMI 127
P + + F++ +S L + ++L+++ T L N H + + +
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHA-----FCKQKKM 343
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D AM E M G + + N LL + + + K G P +YN
Sbjct: 344 DRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL-KDKGCTPVLISYNT 402
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VI ++G + +L EM K ++P+ + + +G +E + E+ K ++ G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I +YN + LCK + + A L M+S G PN TY LI G EG ++ A+
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522
Query: 308 KLFASMTNGG 317
++ A + + G
Sbjct: 523 EMMAELCSRG 532
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 125/267 (46%), Gaps = 1/267 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + MID+A++TFE + G + SV N +L + K E V +F E G
Sbjct: 170 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSD-KG 228
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN T+N +I C G+ ++L +M P + LL + K+ +Y+
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+++ M GI + V YN+ I +LC RS +A LL M I PN TY LI+GF
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KEG + A ++F M+ P+ + C G++E AL++ A G +
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 408
Query: 358 STMKSLVTGLASISKVAEANELIGLMK 384
T +L+ GL K A L+ M+
Sbjct: 409 VTYGTLLNGLCKHEKFELAKRLLERMR 435
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 103/236 (43%), Gaps = 1/236 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + ++F E K + + PN TYN +I C GD +L M
Sbjct: 342 NTLINGFVKEGKIGVAAQVFNEMSK-FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 400
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+R N +G LL G K K+E ++L+ M + G Y + I LCK +
Sbjct: 401 AAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLD 460
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L+ M G+ P++ TY LI+GF + GN++ AK++ M G + +
Sbjct: 461 EAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 520
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
Y CQ G A+KV G T LV+ L K+ EA + + M +
Sbjct: 521 YNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 576
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 3/312 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S ++ + + + +++ + R L N+ + I + Q + AM+
Sbjct: 477 DVITYSSLINGFCRVGNIKSAKEIICRM-YRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ M+ G N L+ E ++ ++ G+ PNS TY+ +I +
Sbjct: 536 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI-GLVPNSITYDCIINGYG 594
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
GD + +S +M + P+ +G LL G K + K L + A
Sbjct: 595 SIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSV 654
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS- 312
+YN + CK EA AL D M+ + P+ TY L+ G ++G A LF +
Sbjct: 655 MYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTA 714
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G P+ + L + G + A M KG P +++ + +
Sbjct: 715 MGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ 774
Query: 373 VAEANELIGLMK 384
+ +AN+ M+
Sbjct: 775 MMKANDFFSTMR 786
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TY+ +I FC G+ S I+ M R + N + L+ F + +
Sbjct: 473 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 532
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV +M G + N+ + SLC+ + EA+ L M G+ PN TY +I+G
Sbjct: 533 MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 592
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+G G+ A F M G P + + LC+GG A K
Sbjct: 593 YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK 639
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 111/290 (38%), Gaps = 36/290 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A FEEM K G A NA++ C + F+ + +G+ PN TYN ++
Sbjct: 743 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM-RWWGVCPNLATYNILL 801
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE------------------- 230
F + S+ + M R+ I P+ F L+ G K
Sbjct: 802 HGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL 861
Query: 231 ----------HKYEDVGK------VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
+KY + GK ++ M G+ + YN L K E+ +
Sbjct: 862 ADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVV 921
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L ML G+ P Y LI+G + G+++GA KL M G L
Sbjct: 922 LHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLH 981
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G+ E A+ V + +P +T +L+ +K+AEA +L G+M+
Sbjct: 982 CGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 1031
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 4/242 (1%)
Query: 145 SVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+VD++ N LL S N E +F + + + P+S TY+ ++ C G + +
Sbjct: 650 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ-NNVLPDSYTYSSLLTGLCRKGKAVTAV 708
Query: 203 SILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ M R ++ PN + L+ G K + + M K G +N I S
Sbjct: 709 CLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 768
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+ + +A M G+ PNL TY L+HGF K+ L L+++M G PD
Sbjct: 769 CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 828
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
F L + G + +K+ + +G + T L+ + K+ +A +L+
Sbjct: 829 KLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 888
Query: 382 LM 383
M
Sbjct: 889 FM 890
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 6/201 (2%)
Query: 188 VIKSFCESG-DSSSVYSILAEMRR--KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+++ C+ G S S++ L + SI P+ F LL+ + KE + + +++
Sbjct: 134 ILRHLCQMGIGSKSIFGALMDTYPLCNSI-PSV--FDLLIRVYLKEGMIDYAVETFELVG 190
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G V N+ + S+ K KR+E +L M +GI PN+ T+ LI+G EGNL+
Sbjct: 191 LVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLK 250
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A L M G P + + C+ G Y+ A+++ + KG T +
Sbjct: 251 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFI 310
Query: 365 TGLASISKVAEANELIGLMKK 385
L + + A+A L+ M+K
Sbjct: 311 DNLCTNHRSAKAYLLLKKMRK 331
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 157 ILSKNYEEVKRI-----FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
IL Y E ++ F G+ P+ +TYN + + +L EM
Sbjct: 869 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 928
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ P + L+ G + + K+ ME G S + ++ L ++E+A
Sbjct: 929 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 988
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+LD ML + P + T+ L+H F ++ + A KL M G + D + +
Sbjct: 989 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1048
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+C G+ A ++ + P+ +T LV +++ + + + +L+ +++R
Sbjct: 1049 MCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1103
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+P+ ++LA K+ + E V + + M GI V +NI I LC ++A
Sbjct: 195 KPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGN 254
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M G P + TY L++ + K+G + A +L M G E D + +F LC
Sbjct: 255 LLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLC 314
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A + + + P+ T +L+ G K+ A ++ M K
Sbjct: 315 TNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK 366
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++ G + +L M R + P F L+ F ++ K + K+ +ME CG
Sbjct: 975 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1034
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V YN+ I +C S A L + M R + PN+ TY L+ NL +
Sbjct: 1035 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1094
Query: 308 KLFASMTNGG 317
KL + G
Sbjct: 1095 KLLTDLQERG 1104
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++ + YN +I C +GDS++ + + EMR + + PN T + +L+ +
Sbjct: 1034 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 1093
Query: 237 GKVLQMMEKCGIAS 250
K+L +++ G+ S
Sbjct: 1094 EKLLTDLQERGLIS 1107
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKL---SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D + FS V+ + + A+ + E+K RPDL ++ + L G+ + A
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL-INGLCLKGR---VSEA 194
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + M +YG + +L S N +F + + I+ + Y+ VI
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASVVQYSIVID 253
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
S C+ G S+ EM K I+ + + L+ G + K++D K+L+ M I
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V ++ I K + EAK L + M++RGI P+ TY LI GF KE L A ++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + GCEPD + + C+ + +++ R +KG +P+ T +LV G
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 371 SKVAEANELIGLMKKR 386
K+ A EL M R
Sbjct: 434 GKLNAAKELFQEMVSR 449
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 10/300 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDH 129
D + FS + + +L E+ TR PD +S++ + + N +
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD-----TITYNSLIDGFCKENCLHE 368
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A Q F+ M G + + L+ +K ++ R+F E G+ PN+ TYN ++
Sbjct: 369 ANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIPNTITYNTLV 427
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+SG ++ + EM + + P+ +G+LL G + ++ + M+K +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
G+ +YNI I +C + ++A +L + +G+KP++ TY +I G K+G+L A L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M GC PD + + + G +++++ G+ ST+K ++ L+
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F +M++ ++ SV + ++ ++++ +F E ++ GI+ + TY+ +I
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLI 287
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C G +L EM ++I P+ F L+ F KE K + ++ M GIA
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I CK EA + D M+S+G +P++ TY LI+ + K ++ +L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F +++ G P++ + CQ G+ A ++ + +++G P T L+ GL
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 370 ISKVAEANELIGLMKK 385
++ +A E+ M+K
Sbjct: 468 NGELNKALEIFEKMQK 483
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP++ T++ ++ FC G S +++ M RP+ L+ G + + +
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G Y + LCK S A L M R IK ++ Y +I
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K+G+ + A LF M G + D + LC G+++ K+ R + + +P
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K+ EA EL M R
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 129/318 (40%), Gaps = 18/318 (5%)
Query: 72 PLDRMA--FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
PL+R A F+ + K + H+++I T L ER + + ++
Sbjct: 7 PLNRKASNFTQILEKGTSLLHYSSI--------TEAKLSYKERLRNGIVDIK-----VND 53
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ FE M + + N L +K Y+ V F + ++ GIE + T +I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMI 112
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY-EDVGKVLQMMEKCGI 248
+C +S+L + P+ F L+ GF E + E V V +M+E
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V V + I LC R EA L+D M+ G +P+ TY +++ K GN A
Sbjct: 173 PDLVTVSTL-INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M + + + LC+ G ++ AL + KG T SL+ GL
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 369 SISKVAEANELIGLMKKR 386
+ K + +++ M R
Sbjct: 292 NDGKWDDGAKMLREMIGR 309
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 126/264 (47%), Gaps = 3/264 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + ++E+ + G++ +V LN ++ ++ E K ++ + G+ P+ TYN
Sbjct: 339 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE-KGVFPDVVTYN 397
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I ++C G + ++ M K ++P + ++ G K KY VL M K
Sbjct: 398 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 457
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G++ YNI + C+ +A+ + D M S+G+ P+L ++ LI K G L+ A
Sbjct: 458 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 517
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K F M N G PD+ + + C+ G ALKV + +G T +++ G
Sbjct: 518 LKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNG 577
Query: 367 LASISKVAEANELIGLMKKR--FP 388
L ++EA+EL M +R FP
Sbjct: 578 LCKEKMLSEADELFTEMTERGVFP 601
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A +EM K G+ N LL+ C + N + +RIF E P G+ P+ +++ +
Sbjct: 446 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPS-QGVVPDLVSFSAL 504
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I ++G +M+ + P+ + +L+ GF + + KV M + G
Sbjct: 505 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 564
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V YN + LCK K EA L M RG+ P+ T+ LI+G+ K+GN+ A
Sbjct: 565 XLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVT 624
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M +PD + C+G E E ++ +++ P+ + L+ G
Sbjct: 625 LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYC 684
Query: 369 SISKVAEANEL 379
++ V+EA L
Sbjct: 685 NMGCVSEAFRL 695
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +++ A + + M GL+ V NA++ G + Y K + E K+ G+ P
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI-GMSP 461
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN ++ C + + I EM + + P+ F L+ K + K
Sbjct: 462 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 521
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ G+A +Y I I C+ EA + D ML +G ++ TY +++G KE
Sbjct: 522 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKE 581
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L A +LF MT G PD Y F + G A+ + + + P T
Sbjct: 582 KMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTY 641
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G S++ + NEL M R
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISR 667
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 139/317 (43%), Gaps = 16/317 (5%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD-LRQNERFHV--HSIVLY 121
A LAP D + ++I + + N + + E LK R + L Q V ++ +L
Sbjct: 527 AGLAP----DNVIYTILIGGFCR----NGV--MSEALKVRDEMLEQGCXLDVVTYNTILN 576
Query: 122 G--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
G + M+ A + F EM + G+ L+ G N + +F E ++
Sbjct: 577 GLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF-EMMIQRNLK 635
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TYN +I FC+ + V + +M + I PN +G+L+ G+ + ++
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 695
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M + G + + N ++ C+ + +A L ML +GI P+ TY LI+GF K
Sbjct: 696 WDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIK 755
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
E N++ A L M N G PD + + + G + A + + +G P ST
Sbjct: 756 EENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRST 815
Query: 360 MKSLVTGLASISKVAEA 376
SL+ G + + + EA
Sbjct: 816 YTSLINGHVTQNNLKEA 832
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 45/288 (15%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL--YGQANMI 127
LD + ++ ++ L + + +L E+ R PD F+ + ++ Y + +
Sbjct: 566 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPD------FYTFTTLINGYXKDGNM 619
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE------FPK--VYGI- 178
+ A+ FE M + L+ V N L+ G E+V ++ + +P YGI
Sbjct: 620 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 679
Query: 179 -------------------------EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
E T N ++K +C +G++ L+ M K I
Sbjct: 680 INGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGI 739
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
P+ + L+ GF KE + ++ ME G+ V YN+ + + R +EA+
Sbjct: 740 VPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAEL 799
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
++ M+ RG+ P+ TY LI+G + NL+ A ++ M G PD
Sbjct: 800 IMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 37/249 (14%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA + + F + GL S++A N+LL G + KV ++
Sbjct: 298 YVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLV----------------KVGWVDL 341
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
E Y +V++S G +VY++ +++ K K E+ L
Sbjct: 342 AWEIYQEVVRS----GVQVNVYTL----------------NIMINALCKNQKIENTKSFL 381
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME+ G+ V YN I + C+ EEA L+D M +G+KP + TY +I+G K
Sbjct: 382 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 441
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G AK + M G PD+ + + C+ A ++ ++G VP +
Sbjct: 442 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 501
Query: 361 KSLVTGLAS 369
+L+ GL S
Sbjct: 502 SALI-GLLS 509
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 102 KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR-QSVDALNALLLGCILSK 160
K R +L+ +RF + SI H++Q+F M +R + + A++L +
Sbjct: 210 KCRENLQLGQRF-IDSIT--SNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKS 266
Query: 161 NYEEVKRIFTEFPKVYG-IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
V+ I YG N ++ +++++ ++ ++ K + +
Sbjct: 267 GVSRVE-IVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 325
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
LL G K + ++ Q + + G+ V NI I +LCK ++ E K+ L M
Sbjct: 326 CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 385
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+G+ P++ TY LI+ + ++G LE A +L SM+ G +P + + LC+ G+Y
Sbjct: 386 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 445
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVT 365
A V + G P +T L+
Sbjct: 446 RAKGVLDEMLKIGMSPDTATYNILLV 471
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 70/170 (41%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N F LL+ + + K + + ++++ G+ +N N + L K+ + A +
Sbjct: 287 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 346
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
++ G++ N+ T +I+ K +E K + M G PD + C+
Sbjct: 347 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 406
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G E A ++ + KG P T +++ GL K A ++ M K
Sbjct: 407 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 456
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKL---SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D + FS V+ + + A+ + E+K RPDL ++ + L G+ + A
Sbjct: 168 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTL-INGLCLKGR---VSEA 223
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + M +YG + +L S N +F + + I+ + Y+ VI
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASVVQYSIVID 282
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
S C+ G S+ EM K I+ + + L+ G + K++D K+L+ M I
Sbjct: 283 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 342
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V ++ I K + EAK L + M++RGI P+ TY LI GF KE L A ++F
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + GCEPD + + C+ + +++ R +KG +P+ T +LV G
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462
Query: 371 SKVAEANELIGLMKKR 386
K+ A EL M R
Sbjct: 463 GKLNAAKELFQEMVSR 478
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 120/249 (48%), Gaps = 1/249 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N + A Q F+ M G + + L+ +K ++ R+F E G+ P
Sbjct: 389 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIP 447
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN ++ FC+SG ++ + EM + + P+ +G+LL G + ++
Sbjct: 448 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 507
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+K + G+ +YNI I +C + ++A +L + +G+KP++ TY +I G K+
Sbjct: 508 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 567
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G+L A LF M GC PD + + + G +++++ G+ ST+
Sbjct: 568 GSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTI 627
Query: 361 KSLVTGLAS 369
K ++ L+
Sbjct: 628 KMVIDMLSD 636
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F +M++ ++ SV + ++ ++++ +F E ++ GI+ + TY+ +I
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLI 316
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C G +L EM ++I P+ F L+ F KE K + ++ M GIA
Sbjct: 317 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 376
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I CK EA + D M+S+G +P++ TY LI+ + K ++ +L
Sbjct: 377 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 436
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F +++ G P++ + CQ G+ A ++ + +++G P T L+ GL
Sbjct: 437 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496
Query: 370 ISKVAEANELIGLMKK 385
++ +A E+ M+K
Sbjct: 497 NGELNKALEIFEKMQK 512
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP++ T++ ++ FC G S +++ M RP+ L+ G + + +
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G Y + LCK S A L M R IK ++ Y +I
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K+G+ + A LF M G + D + LC G+++ K+ R + + +P
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K+ EA EL M R
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITR 373
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 129/318 (40%), Gaps = 18/318 (5%)
Query: 72 PLDRMA--FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
PL+R A F+ + K + H+++I T L ER + + ++
Sbjct: 36 PLNRKASNFTQILEKGTSLLHYSSI--------TEAKLSYKERLRNGIVDIK-----VND 82
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ FE M + + N L +K Y+ V F + ++ GIE + T +I
Sbjct: 83 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLG-FCKGMELNGIEHDMYTMTIMI 141
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY-EDVGKVLQMMEKCGI 248
+C +S+L + P+ F L+ GF E + E V V +M+E
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V V + I LC R EA L+D M+ G +P+ TY +++ K GN A
Sbjct: 202 PDLVTVSTL-INGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 260
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M + + + LC+ G ++ AL + KG T SL+ GL
Sbjct: 261 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 320
Query: 369 SISKVAEANELIGLMKKR 386
+ K + +++ M R
Sbjct: 321 NDGKWDDGAKMLREMIGR 338
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 125/267 (46%), Gaps = 1/267 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + MID+A++TFE + G + SV N +L + K E V +F E G
Sbjct: 921 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSD-KG 979
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN T+N +I C G+ ++L +M P + LL + K+ +Y+
Sbjct: 980 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 1039
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+++ M GI + V YN+ I +LC RS +A LL M I PN TY LI+GF
Sbjct: 1040 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 1099
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KEG + A ++F M+ P+ + C G++E AL++ A G +
Sbjct: 1100 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159
Query: 358 STMKSLVTGLASISKVAEANELIGLMK 384
T +L+ GL K A L+ M+
Sbjct: 1160 VTYGTLLNGLCKHEKFELAKRLLERMR 1186
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 103/236 (43%), Gaps = 1/236 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + ++F E K + + PN TYN +I C GD +L M
Sbjct: 1093 NTLINGFVKEGKIGVAAQVFNEMSK-FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHME 1151
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+R N +G LL G K K+E ++L+ M + G Y + I LCK +
Sbjct: 1152 AAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLD 1211
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L+ M G+ P++ TY LI+GF + GN++ AK++ M G + +
Sbjct: 1212 EAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLI 1271
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
Y CQ G A+KV G T LV+ L K+ EA + + M +
Sbjct: 1272 YNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 1327
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 4/273 (1%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
++S ++Y Q + AM+ + M+ G N L+ E ++
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
++ G+ PNS TY+ +I + GD + +S +M + P+ +G LL G K
Sbjct: 1326 SRI-GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 1384
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ K L + A +YN + CK EA AL D M+ + P+ TY
Sbjct: 1385 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 1444
Query: 293 LIHGFGKEGNLEGAKKLFAS-MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ G ++G A LF + M G P+ + L + G + A M K
Sbjct: 1445 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 1504
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G P +++ + ++ +AN+ M+
Sbjct: 1505 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMR 1537
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TY+ +I FC G+ S I+ M R + N + L+ F + +
Sbjct: 1224 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 1283
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV +M G + N+ + SLC+ + EA+ L M G+ PN TY +I+G
Sbjct: 1284 MKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 1343
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+G G+ A F M G P + + LC+GG A K
Sbjct: 1344 YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK 1390
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 111/290 (38%), Gaps = 36/290 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A FEEM K G A NA++ C + F+ + +G+ PN TYN ++
Sbjct: 1494 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM-RWWGVCPNLATYNILL 1552
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE------------------- 230
F + S+ + M R+ I P+ F L+ G K
Sbjct: 1553 HGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTL 1612
Query: 231 ----------HKYEDVGK------VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
+KY + GK ++ M G+ + YN L K E+ +
Sbjct: 1613 ADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVV 1672
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L ML G+ P Y LI+G + G+++GA KL M G L
Sbjct: 1673 LHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLH 1732
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G+ E A+ V + +P +T +L+ +K+AEA +L G+M+
Sbjct: 1733 CGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 1782
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F LL+ + KE + + +++ G V N+ + S+ K KR+E +L M
Sbjct: 917 FDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMS 976
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+GI PN+ T+ LI+G EGNL+ A L M G P + + C+ G Y+
Sbjct: 977 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A+++ + KG T + L + + A+A L+ M+K
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRK 1082
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 4/242 (1%)
Query: 145 SVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+VD++ N LL S N E +F + + + P+S TY+ ++ C G + +
Sbjct: 1401 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ-NNVLPDSYTYSSLLTGLCRKGKAVTAV 1459
Query: 203 SILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ M R ++ PN + L+ G K + + M K G +N I S
Sbjct: 1460 CLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 1519
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+ + +A M G+ PNL TY L+HGF K+ L L+++M G PD
Sbjct: 1520 CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 1579
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
F L + G + +K+ + +G + T L+ + K+ +A +L+
Sbjct: 1580 KLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 1639
Query: 382 LM 383
M
Sbjct: 1640 FM 1641
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 97/235 (41%), Gaps = 5/235 (2%)
Query: 157 ILSKNYEEVKRI-----FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
IL Y E ++ F G+ P+ +TYN + + +L EM
Sbjct: 1620 ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 1679
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ P + L+ G + + K+ ME G S + ++ L ++E+A
Sbjct: 1680 GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 1739
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+LD ML + P + T+ L+H F ++ + A KL M G + D + +
Sbjct: 1740 MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1799
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+C G+ A ++ + P+ +T LV +++ + + + +L+ +++R
Sbjct: 1800 MCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 1854
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+P+ ++LA K+ + E V + + M GI V +NI I LC ++A
Sbjct: 946 KPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGN 1005
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M G P + TY L++ + K+G + A +L M G E D + +F LC
Sbjct: 1006 LLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLC 1065
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A + + + P+ T +L+ G K+ A ++ M K
Sbjct: 1066 TNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK 1117
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++ G + +L M R + P F L+ F ++ K + K+ +ME CG
Sbjct: 1726 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 1785
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V YN+ I +C S A L + M R + PN+ TY L+ NL +
Sbjct: 1786 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 1845
Query: 308 KLFASMTNGG 317
KL + G
Sbjct: 1846 KLLTDLQERG 1855
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++ + YN +I C +GDS++ + + EMR + + PN T + +L+ +
Sbjct: 1785 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 1844
Query: 237 GKVLQMMEKCGIAS 250
K+L +++ G+ S
Sbjct: 1845 EKLLTDLQERGLIS 1858
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 54/318 (16%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALL-----LGCILSKNYEE 164
SIVLY Q +I A+Q EM + G ++ N ++ +GC+ ++
Sbjct: 364 SIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASH-- 421
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
+ G P+ TYN +I +C+ S ++ M + + P+ + LL
Sbjct: 422 ----LVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G K K E+V ++ + ME+ G + YNI + SLCK K+ EA LL M S+G+K
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537
Query: 285 PNLDTYKHLIHGFGKEGNLEGA------------------------------------KK 308
P++ ++ L GF K G+++GA K
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMK 597
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF+ M N GC+PD+Y + + C+ G K +M K ++P +T ++ L
Sbjct: 598 LFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLC 657
Query: 369 SISKVAEANELIGLMKKR 386
KV EA +I LM ++
Sbjct: 658 VKDKVHEAVGIIHLMLQK 675
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 151/332 (45%), Gaps = 12/332 (3%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
A +K +++P + L++ A + V KL F + +LL E++ +
Sbjct: 12 AVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVN 71
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
E ++ ++ YG+ + A+ TFE MD Y SV + NA++ + + +
Sbjct: 72 NALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAH 131
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+++ + G++ + TY IKSFC++ + +L M NA + ++AG
Sbjct: 132 KVYMRM-RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAG 190
Query: 227 FYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
Y +++ ++ +M+ +C + V +N + LCK E++ LL +L RG+ P
Sbjct: 191 LYDSGEHDHARELFDEMLARC-LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCP 249
Query: 286 NLDTYKHLIHGFGKEGNLE---------GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
NL T+ + G +EG L+ A++ M NGG EPD + C+ G
Sbjct: 250 NLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKG 309
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ A +V + ++ KG+ P T SL+ G
Sbjct: 310 MVQDANRVLKDAVFKGFKPDEFTYCSLINGFC 341
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 103/210 (49%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TY +I FC+ GD ++ + K +RP+ + L+ G ++
Sbjct: 325 GFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPA 384
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M + G + YN+ I LCK+ +A L+D +++G P++ TY LI G
Sbjct: 385 LQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDG 444
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K+ L+ A ++ M + G PD + LC+ G+ E +++ +A KG P+
Sbjct: 445 YCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPN 504
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +V L KV EA +L+G MK +
Sbjct: 505 IITYNIIVDSLCKAKKVNEAVDLLGEMKSK 534
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ YN +IK + G ++ EM PN + L++ G K D
Sbjct: 360 GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDA 419
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ G + YN I CK + + A +++ M S+G+ P++ TY L++G
Sbjct: 420 SHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG 479
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G E ++F +M GC P+ + + LC+ + A+ + +KG P
Sbjct: 480 LCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPD 539
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRF 387
+ +L TG I + A +L M+K++
Sbjct: 540 VVSFGTLFTGFCKIGDIDGAYQLFRRMEKQY 570
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 2/230 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + M G+ V N LL G + EEV IF + G PN TYN
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE-KGCTPNIITYN 509
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK- 245
++ S C++ + +L EM+ K ++P+ FG L GF K + ++ + MEK
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+ YNI + + + A L M + G P+ TY+ +I GF K GN+
Sbjct: 570 YDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQ 629
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K P F LC + A+ + + KG VP
Sbjct: 630 GYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 12/297 (4%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
L L+ P+L + + V+ G + DHA + F+EM L V A N L+
Sbjct: 166 LRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHV 225
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG-------DSSSVYS--ILA 206
E +R+ + K G+ PN T+N ++ C G +S V + L
Sbjct: 226 LCKKGLVFESERLLGKVLK-RGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLR 284
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+M P+ + ++ G+ K+ +D +VL+ G Y I CK
Sbjct: 285 KMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDG 344
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ A A+ L +G++P++ Y LI G ++G + A +L M GC P+ + +
Sbjct: 345 DPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYN 404
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ LC+ G A + ++AKG P T +L+ G K+ A E++ M
Sbjct: 405 LVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRM 461
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 10/183 (5%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ ++I V L +A N LL E+K++ PD+ + + ID A Q
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG----FCKIGDIDGAYQ 561
Query: 133 TFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F M+K Y + + N ++ N ++F+ K G +P++ TY VI
Sbjct: 562 LFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVM-KNSGCDPDNYTYRVVIDG 620
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF-YKEHKYEDVGKVLQMMEKCGIAS 250
FC+ G+ + Y L E K P+ T FG +L K+ +E VG + M++K +
Sbjct: 621 FCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE 680
Query: 251 GVN 253
VN
Sbjct: 681 TVN 683
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 15/218 (6%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE--HKYE 234
G + + TY +++ G+ + +L+EMR NA LL G Y E Y
Sbjct: 35 GFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENV--NNA-----LLEGAYIEAMKNYG 87
Query: 235 DVGKV------LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
GKV + M+ V+ +N + L + +A + M RG++ ++
Sbjct: 88 RKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVY 147
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY I F K A +L +M GC+ ++ + L GE++ A ++
Sbjct: 148 TYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEM 207
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+A+ P LV L V E+ L+G + KR
Sbjct: 208 LARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKR 245
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A + + +L++E+ R D N I + + + +
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G + ++ G + E I P YG++PN YN V+K C
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS-YGLKPNVVCYNTVLKGLC 332
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +L+EM +K + F +L+ F + + V ++L+ M G V
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M S G KPN +Y ++ G G A++L + M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ F FLC+ G E A+++ + + G P + +++ GL K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 374 AEANELIGLMKKR 386
EA EL+ +M +
Sbjct: 513 EEALELLNVMVNK 525
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 153/330 (46%), Gaps = 15/330 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMIDHA 130
+ F+ + L + F + ++L ++ PD+R +++ ++ G + ++ A
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR------MYATIIDGICKEGHLEVA 305
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVI 189
+ M YGL+ +V N +L G ++ ++E + + +E F K ++ T+N ++
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD--DVTFNILV 363
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC++G V +L +M P+ + ++ GF KE ++ +L+ M CG
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I ++ LC R +A+ L+ M+ +G PN T+ LI+ K+G +E A +L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M GC PD + L + G+ E AL++ + KG P+ S+ L+
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543
Query: 370 ISKVAEANELIGLMKKRFPKS-GDMWNAAL 398
+V + ++ +K +S ++NA +
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 137/311 (44%), Gaps = 2/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L A + +LL E+ + + F++ + + Q ++D ++ E
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL-VDFFCQNGLVDRVIELLE 380
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M +G V ++ G +E + G +PN+ +Y V+K C +
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC-GCKPNTVSYTIVLKGLCSA 439
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++++M ++ PN F L+ K+ E ++L+ M G + + Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K ++EEA LL+ M+++GI PN Y + +EG + ++F ++ +
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ E + A+ ++ G +P+ ST L+ GLAS E
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619
Query: 376 ANELIGLMKKR 386
A EL+ + R
Sbjct: 620 AQELLSELCSR 630
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G E + +YN V+K C + V ++ EM R PN F L+ + +E
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V +VL M + G + +Y I +CK E A +L+ M S G+KPN+ Y ++
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G + A++L + M C D F + F CQ G + +++ ++ G +P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
T +++ G + EA L+ M
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSM 417
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P Y+ ++++ C SG + +L M K + + L+L ++ ++
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L+ + G + + YN ++ LC KR + + L+D M+ PN+ T+ LI
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ G E ++ A M+ GC PD + +C+ G E A ++ + G P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+++ GL S + EA EL+ M ++
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 17/298 (5%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QA 124
+ PLD + F+I V Q + + +LLE++ + PD+ ++ V+ G +
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI------TYTTVINGFCKE 404
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ID A+ + M G + + + +L G + + + + + ++ + G PN T
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ-QGCPPNPVT 463
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I C+ G +L +M P+ + ++ G K K E+ ++L +M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI+ +Y+ +L + R + + D + I+ + Y +I K +
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG----EYETALKVC-RASMAKGWVPHF 357
A FA M + GC P+ + M L G E ++C R ++ K + HF
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHF 641
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 4/214 (1%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN+ T+ V++ C G + +L EM K P + ++L + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+VL+ M G N+ + ++C+ +EA LL + G + ++ +Y ++ G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++L M C P+ F +LC+ G +E +V G P
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+++ G+ + ANE++ R P G
Sbjct: 287 RMYATIIDGICKEGHLEVANEIL----NRMPSYG 316
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A + + +L++E+ R D N I + + + +
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G + ++ G + E I P YG++PN YN V+K C
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS-YGLKPNVVCYNTVLKGLC 332
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +L+EM +K + F +L+ F + + V ++L+ M G V
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M S G KPN +Y ++ G G A++L + M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ F FLC+ G E A+++ + + G P + +++ GL K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 374 AEANELIGLMKKR 386
EA EL+ +M +
Sbjct: 513 EEALELLNVMVNK 525
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 153/330 (46%), Gaps = 15/330 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMIDHA 130
+ F+ + L + F + ++L ++ PD+R +++ ++ G + ++ A
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR------MYATIIDGICKEGHLEVA 305
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVI 189
+ M YGL+ +V N +L G ++ ++E + + +E F K ++ T+N ++
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD--DVTFNILV 363
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC++G V +L +M P+ + ++ GF KE ++ +L+ M CG
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I ++ LC R +A+ L+ M+ +G PN T+ LI+ K+G +E A +L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M GC PD + L + G+ E AL++ + KG P+ S+ L+
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543
Query: 370 ISKVAEANELIGLMKKRFPKS-GDMWNAAL 398
+V + ++ +K +S ++NA +
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 137/311 (44%), Gaps = 2/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L A + +LL E+ + + F++ + + Q ++D ++ E
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL-VDFFCQNGLVDRVIELLE 380
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M +G V ++ G +E + G +PN+ +Y V+K C +
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC-GCKPNTVSYTIVLKGLCSA 439
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++++M ++ PN F L+ K+ E ++L+ M G + + Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K ++EEA LL+ M+++GI PN Y + +EG + ++F ++ +
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ E + A+ ++ G +P+ ST L+ GLAS E
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619
Query: 376 ANELIGLMKKR 386
A EL+ + R
Sbjct: 620 AQELLSELCSR 630
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G E + +YN V+K C + V ++ EM R PN F L+ + +E
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V +VL M + G + +Y I +CK E A +L+ M S G+KPN+ Y ++
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G + A++L + M C D F + F CQ G + +++ ++ G +P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
T +++ G + EA L+ M
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSM 417
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P Y+ ++++ C SG + +L M K + + L+L ++ ++
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L+ + G + + YN ++ LC KR + + L+D M+ PN+ T+ LI
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ G E ++ A M+ GC PD + +C+ G E A ++ + G P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+++ GL S + EA EL+ M ++
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 17/301 (5%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QA 124
+ PLD + F+I V Q + + +LLE++ + PD+ ++ V+ G +
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV------ITYTTVINGFCKE 404
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ID A+ + M G + + + +L G + + + + + ++ + G PN T
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ-QGCPPNPVT 463
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I C+ G +L +M P+ + ++ G K K E+ ++L +M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI+ +Y+ +L + R + + D + I+ + Y +I K +
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG----EYETALKVC-RASMAKGWVPHFST 359
A FA M + GC P+ + M L G E ++C R ++ K + HF
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643
Query: 360 M 360
+
Sbjct: 644 V 644
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 4/214 (1%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN+ T+ V++ C G + +L EM K P + ++L + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+VL+ M G N+ + ++C+ +EA LL + G + ++ +Y ++ G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++L M C P+ F +LC+ G +E +V G P
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+++ G+ + ANE++ R P G
Sbjct: 287 RMYATIIDGICKEGHLEVANEIL----NRMPSYG 316
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A + + +L++E+ R D N I + + + +
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G + ++ G + E I P YG++PN YN V+K C
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS-YGLKPNVVCYNTVLKGLC 332
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +L+EM +K + F +L+ F + + V ++L+ M G V
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M S G KPN +Y ++ G G A++L + M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ F FLC+ G E A+++ + + G P + +++ GL K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 374 AEANELIGLMKKR 386
EA EL+ +M +
Sbjct: 513 EEALELLNVMVNK 525
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 153/330 (46%), Gaps = 15/330 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMIDHA 130
+ F+ + L + F + ++L ++ PD+R +++ ++ G + ++ A
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR------MYATIIDGICKEGHLEVA 305
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVI 189
+ M YGL+ +V N +L G ++ ++E + + +E F K ++ T+N ++
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD--DVTFNILV 363
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC++G V +L +M P+ + ++ GF KE ++ +L+ M CG
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I ++ LC R +A+ L+ M+ +G PN T+ LI+ K+G +E A +L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M GC PD + L + G+ E AL++ + KG P+ S+ L+
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543
Query: 370 ISKVAEANELIGLMKKRFPKS-GDMWNAAL 398
+V + ++ +K +S ++NA +
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 137/311 (44%), Gaps = 2/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L A + +LL E+ + + F++ + + Q ++D ++ E
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL-VDFFCQNGLVDRVIELLE 380
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M +G V ++ G +E + G +PN+ +Y V+K C +
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC-GCKPNTVSYTIVLKGLCSA 439
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++++M ++ PN F L+ K+ E ++L+ M G + + Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K ++EEA LL+ M+++GI PN Y + +EG + ++F ++ +
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ E + A+ ++ G +P+ ST L+ GLAS E
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619
Query: 376 ANELIGLMKKR 386
A EL+ + R
Sbjct: 620 AQELLSELCSR 630
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G E + +YN V+K C + V ++ EM R PN F L+ + +E
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V +VL M + G + +Y I +CK E A +L+ M S G+KPN+ Y ++
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G + A++L + M C D F + F CQ G + +++ ++ G +P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
T +++ G + EA L+ M
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSM 417
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P Y+ ++++ C SG + +L M K + + L+L ++ ++
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L+ + G + + YN ++ LC KR + + L+D M+ PN+ T+ LI
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ G E ++ A M+ GC PD + +C+ G E A ++ + G P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+++ GL S + EA EL+ M ++
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 17/301 (5%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QA 124
+ PLD + F+I V Q + + +LLE++ + PD+ ++ V+ G +
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDV------ITYTTVINGFCKE 404
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ID A+ + M G + + + +L G + + + + + ++ + G PN T
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ-QGCPPNPVT 463
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I C+ G +L +M P+ + ++ G K K E+ ++L +M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI+ +Y+ +L + R + + D + I+ + Y +I K +
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG----EYETALKVC-RASMAKGWVPHFST 359
A FA M + GC P+ + M L G E ++C R ++ K + HF
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGI 643
Query: 360 M 360
+
Sbjct: 644 V 644
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 4/214 (1%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN+ T+ V++ C G + +L EM K P + ++L + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+VL+ M G N+ + ++C+ +EA LL + G + ++ +Y ++ G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++L M C P+ F +LC+ G +E +V G P
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+++ G+ + ANE++ R P G
Sbjct: 287 RMYATIIDGICKEGHLEVANEIL----NRMPSYG 316
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 134/313 (42%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A + + +L++E+ R D N I + + + +
Sbjct: 215 DIVSYNAVLKGLCMAKRWGDVEELMDEM-VRVDCAPNIVTFNTLIGYLCRNGLFERVHEV 273
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G + ++ G + E I P YG++PN YN V+K C
Sbjct: 274 LAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS-YGLKPNVVCYNTVLKGLC 332
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +L+EM +K + F +L+ F + + V ++L+ M G V
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M S G KPN +Y ++ G G A++L + M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ F FLC+ G E A+++ + + G P + +++ GL K
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512
Query: 374 AEANELIGLMKKR 386
EA EL+ +M +
Sbjct: 513 EEALELLNVMVNK 525
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 153/330 (46%), Gaps = 15/330 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMIDHA 130
+ F+ + L + F + ++L ++ PD+R +++ ++ G + ++ A
Sbjct: 252 VTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR------MYATIIDGICKEGHLEVA 305
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVI 189
+ M YGL+ +V N +L G ++ ++E + + +E F K ++ T+N ++
Sbjct: 306 NEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD--DVTFNILV 363
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC++G V +L +M P+ + ++ GF KE ++ +L+ M CG
Sbjct: 364 DFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCK 423
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I ++ LC R +A+ L+ M+ +G PN T+ LI+ K+G +E A +L
Sbjct: 424 PNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 483
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M GC PD + L + G+ E AL++ + KG P+ S+ L+
Sbjct: 484 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR 543
Query: 370 ISKVAEANELIGLMKKRFPKS-GDMWNAAL 398
+V + ++ +K +S ++NA +
Sbjct: 544 EGRVNKVIQMFDNIKDTTIRSDAVLYNAVI 573
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 137/311 (44%), Gaps = 2/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L A + +LL E+ + + F++ + + Q ++D ++ E
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNIL-VDFFCQNGLVDRVIELLE 380
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M +G V ++ G +E + G +PN+ +Y V+K C +
Sbjct: 381 QMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSC-GCKPNTVSYTIVLKGLCSA 439
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++++M ++ PN F L+ K+ E ++L+ M G + + Y
Sbjct: 440 GRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 499
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K ++EEA LL+ M+++GI PN Y + +EG + ++F ++ +
Sbjct: 500 STVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKD 559
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ E + A+ ++ G +P+ ST L+ GLAS E
Sbjct: 560 TTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKE 619
Query: 376 ANELIGLMKKR 386
A EL+ + R
Sbjct: 620 AQELLSELCSR 630
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G E + +YN V+K C + V ++ EM R PN F L+ + +E
Sbjct: 210 FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFER 269
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V +VL M + G + +Y I +CK E A +L+ M S G+KPN+ Y ++
Sbjct: 270 VHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLK 329
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G + A++L + M C D F + F CQ G + +++ ++ G +P
Sbjct: 330 GLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMP 389
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
T +++ G + EA L+ M
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSM 417
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P Y+ ++++ C SG + +L M K + + L+L ++ ++
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEA 200
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L+ + G + + YN ++ LC KR + + L+D M+ PN+ T+ LI
Sbjct: 201 VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ G E ++ A M+ GC PD + +C+ G E A ++ + G P+
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+++ GL S + EA EL+ M ++
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 17/298 (5%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QA 124
+ PLD + F+I V Q + + +LLE++ + PD+ ++ V+ G +
Sbjct: 351 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI------TYTTVINGFCKE 404
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ID A+ + M G + + + +L G + + + + + ++ + G PN T
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ-QGCPPNPVT 463
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I C+ G +L +M P+ + ++ G K K E+ ++L +M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI+ +Y+ +L + R + + D + I+ + Y +I K +
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG----EYETALKVC-RASMAKGWVPHF 357
A FA M + GC P+ + M L G E ++C R ++ K + HF
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHF 641
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 4/214 (1%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN+ T+ V++ C G + +L EM K P + ++L + + +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+VL+ M G N+ + ++C+ +EA LL + G + ++ +Y ++ G
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++L M C P+ F +LC+ G +E +V G P
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+++ G+ + ANE++ R P G
Sbjct: 287 RMYATIIDGICKEGHLEVANEIL----NRMPSYG 316
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 146/318 (45%), Gaps = 10/318 (3%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A AV +L+ A + + L+E++ R + E V ++ + +A D A++TF
Sbjct: 63 AHEAAVRRLAAAGDVDGVQLELQEMRLR-GVPCTEGALVAAVGAFARAGAPDRALKTFYR 121
Query: 137 M--DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
D R + L L+ +L +N + + G++PN TYN ++++ C+
Sbjct: 122 AVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQ 181
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + +L EM K P+ +G +++ + ++ +VL +
Sbjct: 182 NHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAAS----- 236
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I +LC+ R +E A++ M+ RG++PN+ TY +++ F K G L A + A M
Sbjct: 237 YNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMV 296
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC P+ F L G AL + + +A+GW P + L+ GL S+ +
Sbjct: 297 ITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLK 356
Query: 375 EANELIGLMKKR--FPKS 390
A+ ++ M++ FP +
Sbjct: 357 GASSVLNDMEQHGCFPNA 374
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 24/330 (7%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
+++ V L Q + A ++L+E+ T+ PD V YG I A+ T
Sbjct: 172 YNLLVRALCQNHRVGAARKMLDEMATKGCPPD-----------DVTYGT---IVSALCTL 217
Query: 135 EEMDKYGLRQSVD-----ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
+D+ S + NA++L +EV + + G++PN TY ++
Sbjct: 218 GRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVG-RGLQPNVITYTTIV 276
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC++G+ +ILA M PN F L+ G + + + D + + M G A
Sbjct: 277 NAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWA 336
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN+ I+ LC + + A ++L+ M G PN TY LI GF K G+L+GA +
Sbjct: 337 PSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISI 396
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ MT GC+P+ + C+ + A + + + P+ T +L+ L +
Sbjct: 397 WNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCN 456
Query: 370 ISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
+V A + M++ P +G +N L
Sbjct: 457 CRRVGRALGVFHEMRRHGCPPNGRTYNELL 486
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 2/292 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+++++ + L S +L +++ N R + I + +A +D A+ +
Sbjct: 340 VSYNVLIRGLCSVGDLKGASSVLNDMEQHGCF-PNARTYSTLIDGFSKAGDLDGAISIWN 398
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M + G + +V + ++G K + V PN+ T+N +I+S C
Sbjct: 399 DMTRSGCKPNV-VVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNC 457
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ EMRR PN + LL G ++E D +++ M+ GI + Y
Sbjct: 458 RRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTY 517
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + LC+++ EA + M+ RGI+P+ T+ +IH + KEG + A + +M
Sbjct: 518 NTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNV 577
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
C + + + LC + E A+ + +G P+ T LV G+
Sbjct: 578 VNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 1/258 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ ++ M G S + N L+ G + + + + + +G PN+ TY+
Sbjct: 320 VHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQ-HGCFPNARTYS 378
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I F ++GD SI +M R +PN + ++ F K+ + ++ M
Sbjct: 379 TLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVE 438
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+N I+SLC +R A + M G PN TY L+HG +EGN A
Sbjct: 439 NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDA 498
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M N G E + LCQ A+ + +G P T +++
Sbjct: 499 LQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHA 558
Query: 367 LASISKVAEANELIGLMK 384
+V A ++G M
Sbjct: 559 YCKEGEVRMAAWILGAMN 576
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 81/220 (36%), Gaps = 32/220 (14%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSI---------------RPNATDFGLLLAG 226
+ + ++ +GD V L EMR + + R A D L
Sbjct: 61 ARAHEAAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRAL--KT 118
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
FY+ D+G C + +YN I +L + + M G++PN
Sbjct: 119 FYR--AVHDLG--------CARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPN 168
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ TY L+ + + A+K+ M GC PD + LC G + A +V
Sbjct: 169 VFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLS 228
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A+ P ++ +++ L ++ E ++G M R
Sbjct: 229 AA-----PPVAASYNAVILALCREFRMQEVFAVVGDMVGR 263
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 144/333 (43%), Gaps = 37/333 (11%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ +LS+A F + LL EL+ + +E + I YG A+ A++TF + +G
Sbjct: 93 IYRLSRARAFEPVESLLLELQDS-GINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFG 151
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+R+SV +LN LL + + + V +F +G+ PN T N +IK+ C+ D
Sbjct: 152 VRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGA 211
Query: 202 YSILAEMRRKSIRPN-----------------------------------ATDFGLLLAG 226
+ EM I PN AT + +L+ G
Sbjct: 212 RKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDG 271
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ K+ ++ D KV+ ME+ G+ Y + I CK ++S EA LL+ ML + PN
Sbjct: 272 YVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPN 331
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+I EG ++ A K++ + C PD+ ++LC+ G A K+
Sbjct: 332 SALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFN 391
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+G + T +L+ G+ + ++ EA L
Sbjct: 392 -EFERGTISSLLTYNTLIAGMCEMGELCEAARL 423
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 6/270 (2%)
Query: 127 IDHAMQTFEEMDKY--GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+D A+Q F KY + D +A++ ++ +E V+ + E GI + +
Sbjct: 65 LDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLLELQD-SGINCSEDL 123
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+ VI+S+ + ++ +R + LL + +++ V + + +
Sbjct: 124 FITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSK 183
Query: 245 -KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
K G+ V NI I++LCK E A+ + D M S GI PN+ TY ++ G+ G++
Sbjct: 184 SKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDM 243
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
GAK++F + + G PD+ + + + G + A+KV G P+ T +
Sbjct: 244 IGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVI 303
Query: 364 VTGLASISKVAEANELIGLM--KKRFPKSG 391
+ G K EA L+ M KK P S
Sbjct: 304 ILGYCKERKSGEALNLLNDMLEKKYIPNSA 333
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 13/247 (5%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIE 179
Y + A++ +EM++ G+ + ++LG C K+ E + + K Y
Sbjct: 272 YVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKY--I 329
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PNS KVI C G + ++ +K+ P+ L+ KE + K+
Sbjct: 330 PNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKL 389
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
E+ G S + YN I +C++ EA L D ML +G PN TY LI GF K
Sbjct: 390 FNEFER-GTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLK 448
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG------W 353
G + K+ M + GC + + + L + G+ E L + ++ G W
Sbjct: 449 VGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAVDFKAW 508
Query: 354 ---VPHF 357
VPHF
Sbjct: 509 NLFVPHF 515
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 1/214 (0%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N +TY+ +I + V S+L E++ I + F ++ + + + K
Sbjct: 85 NYDTYHAIIYRLSRARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTF 144
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGK 299
++ G+ V N + +L + R L S+ G+ PN+ T LI K
Sbjct: 145 LRIQTFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCK 204
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ ++EGA+K+F M + G P+ + G+ A +V GW+P +T
Sbjct: 205 KNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATT 264
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
L+ G + +A +++ M++ + D+
Sbjct: 265 YTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDI 298
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 132/266 (49%), Gaps = 4/266 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPN 181
+A +D A F + + G++ V +++LL G C + E V +F P++ G P+
Sbjct: 115 RARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPEL-GCVPD 173
Query: 182 SETYNKVIKSFCESGDSSSVYSIL--AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
+ +Y+ V+KS C+ G S IL A + N + ++ G +KE K + +
Sbjct: 174 AISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDL 233
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M + G+ V YN I +LCK + ++A+ +L M+ G++P+ TY LIHG+
Sbjct: 234 FHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYST 293
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A ++F MT+ G P++ F FLC+ G E A + + +AKG + +
Sbjct: 294 LGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIIS 353
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+L+ G A+ + + + L LM +
Sbjct: 354 YSTLLHGYATAGCLVDMSNLFNLMVR 379
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQA 124
LA L+ +++S + + A +S L L R + N+ HV +I++ Y +
Sbjct: 343 LAKGHKLNIISYSTLLHGYATAGCLVDMSNLFN-LMVRDGIVPNQ--HVFNILVNGYAKC 399
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
M+ AM FE+M K GL V A++ + ++ F G+EPN
Sbjct: 400 GMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID-KGVEPNFAV 458
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +I+ FC GD ++ E+R K + P F L+ KE + + ++ M+
Sbjct: 459 YQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMII 518
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G + VN++ I C + + EA + D M+S GI+P++ TY L++G K G ++
Sbjct: 519 RTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRID 578
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
LF + + G +P ++ + + L G A ++ + + G T L+
Sbjct: 579 DGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILL 638
Query: 365 TGLASISKVAEA 376
TGL + EA
Sbjct: 639 TGLCRNNCTEEA 650
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 128/319 (40%), Gaps = 2/319 (0%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P + + +S V L + L E+ T+ + N + I +A +D A
Sbjct: 208 PCNVVVYSTVVHGLFKEGKVGEACDLFHEM-TQQGVPPNVVTYNSVIHALCKARAVDKAQ 266
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+M G++ N L+ G +++ R+F E G+ PN+ T + +
Sbjct: 267 GILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTS-RGVIPNTVTCSTFVAF 325
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G M K + N + LL G+ D+ + +M + GI
Sbjct: 326 LCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+V+NI + K EA + + M RG+ P++ TY +IH F + G+++ A F
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G EP+ + C G+ A ++ KG P + SL+ L
Sbjct: 446 HMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEG 505
Query: 372 KVAEANELIGLMKKRFPKS 390
+V EA + ++ + K+
Sbjct: 506 RVFEAQRIFDMIIRTGEKA 524
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 124 ANMIDH---------AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
A++I+H A + F+ + + G + V+ +L+ G L E R+
Sbjct: 495 ASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVS 554
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V GIEP+ TY ++ C++G + E+ K ++P +G++L G + +
Sbjct: 555 V-GIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTA 613
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLC------------------------------- 263
++ Q M + GIA + Y+I + LC
Sbjct: 614 AAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673
Query: 264 ----KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
K +R EEA+ L + G+ P + TY ++ KEG++E A+ +F+ M G
Sbjct: 674 SKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLS 733
Query: 320 PDSYCFFMFTYFLCQGGE-YETALKVCRA 347
P S+ + L + GE + + +CR
Sbjct: 734 PTSHFINVIVRTLLEKGEIVKAGIYMCRV 762
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 5/267 (1%)
Query: 116 HSIVLYGQAN---MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+S +L+G A ++D + F M + G+ + N L+ G E IF +
Sbjct: 354 YSTLLHGYATAGCLVDMS-NLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDM 412
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K G+ P+ TY VI +FC G M K + PN + L+ GF
Sbjct: 413 QK-RGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGD 471
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+++ + G+ + + I LCK R EA+ + D ++ G K +++ +
Sbjct: 472 LVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTS 531
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI G+ G + A ++ +M + G EPD + C+ G + L + R + KG
Sbjct: 532 LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591
Query: 353 WVPHFSTMKSLVTGLASISKVAEANEL 379
P T ++ GL + A A E+
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEM 618
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 132/309 (42%), Gaps = 10/309 (3%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPD-LRQNERFHVHSIVLYGQANMI 127
P + + ++ + L +A + +L ++ +PD + N H +S + GQ
Sbjct: 243 PPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTL--GQWK-- 298
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A++ F+EM G+ + + + EE + F G + N +Y+
Sbjct: 299 -QAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM-LAKGHKLNIISYST 356
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ + +G + ++ M R I PN F +L+ G+ K + + + M+K G
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V Y I + C++ ++A + M+ +G++PN Y+ LI GF G+L A+
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAE 476
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L + N G P F LC+ G A ++ + G + SL+ G
Sbjct: 477 ELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGY 536
Query: 368 ASISKVAEA 376
I K++EA
Sbjct: 537 CLIGKMSEA 545
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P TY+ +I C + ++ + R+ ++ + LL G + ++ V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 240 L-QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG--IKPNLDTYKHLIHG 296
L M + G Y+ ++S+C RS+ A +L + +G N+ Y ++HG
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHG 220
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG + A LF MT G P+ + + LC+ + A + R + G P
Sbjct: 221 LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPD 280
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ G +++ + +A + M R
Sbjct: 281 NVTYNTLIHGYSTLGQWKQAVRMFKEMTSR 310
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A+ +EM+ YG++ + + L+ G I ++ IF E K G
Sbjct: 451 INLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKS-G 509
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I++FC+ G+ IL +M+++ ++P+ F ++ GF +
Sbjct: 510 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRAL 569
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L +M + G A V YN I L K + E A ++L+ M GI PN TY ++ G+
Sbjct: 570 NILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 629
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G++ A + F + GG + D Y + C+ G ++AL V R + +
Sbjct: 630 AANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNT 689
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A V EA +L+ MK+
Sbjct: 690 FVYNILIDGWARRGDVWEAADLMKQMKE 717
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 144/311 (46%), Gaps = 4/311 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
+ +SI ++ ++ N + L +E K + DL N + + I + Q+ +D A +
Sbjct: 340 VTYSIIIAGFAKINDAQSADNLFKEAKAKLGDL--NGIIYSNIIHAHCQSGNMDRAEELV 397
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM++ G+ +DA ++++ G + ++ ++ +F K P+ +Y +I + +
Sbjct: 398 REMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERL-KECCFTPSIISYGCLINLYIK 456
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G + +I EM I+ N + +L++GF H + + + + M K G+ +
Sbjct: 457 IGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAI 516
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN+ I++ CK+ + A +L+ M ++P+ ++ +I GF G+++ A + M
Sbjct: 517 YNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMR 576
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC P + + L + + E A+ V G P+ T ++ G A+ +
Sbjct: 577 RSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIG 636
Query: 375 EANELIGLMKK 385
+A E +K+
Sbjct: 637 KAFEYFTKIKE 647
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 138/331 (41%), Gaps = 6/331 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N F I + + L P DR +++ + + + + ++LE+++ + ++ + R
Sbjct: 496 ANAFSIFEEMLKSGLQP----DRAIYNLLIEAFCKMGNMDRAIRILEKMQ-KERMQPSNR 550
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I + A + A+ + M + G +V NAL+ G I E + +
Sbjct: 551 AFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKM 610
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ GI PN TY +++ + +GD + +++ ++ + + LL K +
Sbjct: 611 -SIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGR 669
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ V + M IA VYNI I + EA L+ M G+ PN+ TY
Sbjct: 670 MQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTS 729
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
I+ K G+++ A+K+ M + G +P+ + + + ALK G
Sbjct: 730 YINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAG 789
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P + LVT L S + V E + G++
Sbjct: 790 LKPDEAAYHCLVTSLLSRATVMEGSTYTGIL 820
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 128/298 (42%), Gaps = 10/298 (3%)
Query: 78 FSIAVSKLSQANHF-NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S+ +S + F NA S E LK+ L+ + + I + + +D A++ E+
Sbjct: 482 YSMLISGFIHLHDFANAFSIFEEMLKS--GLQPDRAIYNLLIEAFCKMGNMDRAIRILEK 539
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K ++ S A ++ G ++ + + I + + G P TYN +I +
Sbjct: 540 MQKERMQPSNRAFRPIIEGFAVAGDMKRALNIL-DLMRRSGCAPTVMTYNALIHGLIKKN 598
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---GIASGVN 253
S+L +M I PN + +++ G+ D+GK + K G+ V
Sbjct: 599 QVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANG---DIGKAFEYFTKIKEGGLKLDVY 655
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y +++ CK R + A A+ M ++ I N Y LI G+ + G++ A L M
Sbjct: 656 IYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQM 715
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G P+ + + + C+ G+ + A KV G P+ T +L+ G A S
Sbjct: 716 KEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKAS 773
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 118/303 (38%), Gaps = 36/303 (11%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV Y + HA TFE M G+ + +L+ ++++ V E K G
Sbjct: 276 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEM-KAEG 334
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
IE TY+ +I F + D+ S ++ E + K N + ++ + +
Sbjct: 335 IELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAE 394
Query: 238 KVLQMMEKCGIASGVNVYNI-------------------RIQSLC--------------- 263
++++ ME+ GI + ++ Y+ R++ C
Sbjct: 395 ELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLY 454
Query: 264 -KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K+ + +A A+ M S GIK N TY LI GF + A +F M G +PD
Sbjct: 455 IKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDR 514
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+ G + A+++ + P + ++ G A + A ++ L
Sbjct: 515 AIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDL 574
Query: 383 MKK 385
M++
Sbjct: 575 MRR 577
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 7/177 (3%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
++++ V F PK P+ + +I + + GD + MR + I PNA
Sbjct: 252 EDWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFV 306
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F L+ + V ++ M+ GI + Y+I I K+ ++ A L
Sbjct: 307 FTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAK 366
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQ 334
++ N Y ++IH + GN++ A++L M G + D+Y M Y + Q
Sbjct: 367 AKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQ 423
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 74/198 (37%), Gaps = 6/198 (3%)
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
P G E + +V++S E D +V S + + P+ +FGL++ + K
Sbjct: 231 PWHQGREEACREFRRVVESRPE--DWQAVVSAFERIPK----PSRREFGLMIVYYAKRGD 284
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ M GI V+ + + + + ++ M + GI+ + TY
Sbjct: 285 KHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSI 344
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I GF K + + A LF + + + + CQ G + A ++ R G
Sbjct: 345 IIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 404
Query: 353 WVPHFSTMKSLVTGLASI 370
S++ G I
Sbjct: 405 IDAPIDAYHSMMHGYTII 422
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 3/272 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++IV+ G +A ++D A F++M G+R ++ L+ G + ++EV R+ E
Sbjct: 242 YTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEM- 300
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+G+EP+ TY ++ C+ G + + M RK I+P+ + +G++L G+ +
Sbjct: 301 SAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGAL 360
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ L +M GI+ ++NI + K EA + + M +G+ PN+ Y L
Sbjct: 361 SEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATL 420
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I K G ++ A+ F M N G P+ F Y LC ++E A ++ + +G
Sbjct: 421 IDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGI 480
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ +++ L + +V +A LI LM++
Sbjct: 481 HPNVVFFNTIMCNLCTEGRVMKAQRLIDLMER 512
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 3/210 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR---PNATDFGLLLAGFYKEHKY 233
G PN +YN ++K FC+ + +L M +R PN + ++ GF+ E +
Sbjct: 161 GCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQV 220
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ + M GI V Y I I LCK + + A+ + M+ +G++PN+ TY L
Sbjct: 221 DKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCL 280
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
IHG+ G + ++ M+ G EPD + + + +LC+ G+ A K+ + + KG
Sbjct: 281 IHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGI 340
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLM 383
P S ++ G A+ ++E + + LM
Sbjct: 341 KPDVSIYGIILHGYATKGALSEMHSFLDLM 370
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI PN TY VI C++ + +M K +RPN + L+ G+ ++++V
Sbjct: 234 GIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEV 293
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ M G+ Y + + LCK + EA+ L D M+ +GIKP++ Y ++HG
Sbjct: 294 VRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHG 353
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +G L M G P+ Y F + + A+ + +G P+
Sbjct: 354 YATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPN 413
Query: 357 FSTMKSLVTGLASISKVAEA 376
+L+ L + +V +A
Sbjct: 414 VVNYATLIDALCKLGRVDDA 433
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 3/209 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
++ +IV + + MI AM F +M + GL +V L+ ++ + F +
Sbjct: 380 YIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQ 439
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G+ PN + ++ C + EM + I PN F ++ E
Sbjct: 440 MIN-EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEG 498
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ +++ +ME+ G + YN I+ C + +++EA LLD MLS G+KPN TY
Sbjct: 499 RVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYN 558
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L+HG+ ++G ++ A +F M + G P
Sbjct: 559 TLLHGYCRDGRIDDAYSVFQEMLSNGITP 587
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 115 VHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
V + ++YG + + A + F EM G+ +V N ++ + +R+
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+V G P+ +YN +I+ C G + +L M ++PN + LL G+ ++ +
Sbjct: 511 ERV-GTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+D V Q M GI V YN + L K +R EAK L M++ G + ++ TY
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+++G K ++ A K+F S+ + + D F + L + G E A+ + A G
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
VP +T + + L + E + + M+K
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEK 722
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN Y +I + C+ G +M + + PN F L+ G K+E
Sbjct: 409 GLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKA 468
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
G++ M GI V +N + +LC R +A+ L+D M G +P++ +Y LI G
Sbjct: 469 GELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRG 528
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G + A KL M + G +P+ + + C+ G + A V + ++ G P
Sbjct: 529 HCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPV 588
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T +++ GL + +EA EL
Sbjct: 589 VVTYNTILHGLFKTRRFSEAKEL 611
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 36/228 (15%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M++ G R + + NAL+ G L +E ++ V G++PN TYN ++
Sbjct: 503 AQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSV-GLKPNECTYNTLL 561
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C G YS+ EM I P + +L G +K ++ + ++ M G
Sbjct: 562 HGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQ 621
Query: 250 SGVNVYNIRI----------------QSLC-------------------KLKRSEEAKAL 274
+ YNI + QSLC K R E+A L
Sbjct: 622 WSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNL 681
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ + G+ P++ TY+ + +EG+LE +F+ M GC P+S
Sbjct: 682 FATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNS 729
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
Query: 188 VIKSFCES---GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
++K C++ G++ V +L M PN + LL GF E++ E+ ++L MM
Sbjct: 136 LLKGLCDAKRVGEAMGV--LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMA 193
Query: 245 KCGIAS---GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+ S + YN I + ++A L M +GI PN+ TY +I G K
Sbjct: 194 DGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQ 253
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ A+ +F M + G P+ + + G+++ +++ + A G P T
Sbjct: 254 VVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYG 313
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
L+ L K EA +L M ++
Sbjct: 314 LLLDYLCKKGKCTEARKLFDSMIRK 338
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 3/274 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+S V++G + +D A + F +M + G ++ N LL G + +E + E
Sbjct: 80 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM- 138
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G++P+ +Y+ ++ C++G + + P+ + L+AG K +
Sbjct: 139 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRL 198
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ K+ + M + V + + LCK R +EA+ +L+ M R PN+ TY L
Sbjct: 199 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 258
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G K G + A+++F M G EP+ + + C ++AL + A G
Sbjct: 259 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 318
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
+P T +L+ GL + EAN L G MK +F
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKF 352
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN TYN +I FC+ Y +L EM+ + PN + ++ GF ++ K +
Sbjct: 37 GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTA 96
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ + M + G + YN + LC+ +EA LLD M RG++P+ +Y L+ G
Sbjct: 97 YKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAG 156
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G ++ A K+F +NG C PD + LC+ G + A K+ P
Sbjct: 157 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPD 216
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ GL ++ EA +++ M+ R
Sbjct: 217 VVTFTALMDGLCKGDRLQEAQQVLETMEDR 246
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 12/316 (3%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QA 124
+ P D +A+S ++ L + + +L E+++ PD+ + ++ G +
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDV------VTFTALMDGLCKG 230
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ + A Q E M+ +V ++L+ G + + + +F V GIEPN T
Sbjct: 231 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI-VRGIEPNVVT 289
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I FC + S ++ EM P+ + L+ G K + + ++ M+
Sbjct: 290 YNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMK 349
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
V Y+ I CKL+R + A+ L D ML + + P++ T+ L+ G+ G ++
Sbjct: 350 AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVD 409
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A++L M C PD Y + C+ G A +V + +G P+ T +L+
Sbjct: 410 DAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALI 469
Query: 365 TGLASISKVAEANELI 380
K A +L+
Sbjct: 470 DAFCRAGKPTVAYKLL 485
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 140/321 (43%), Gaps = 2/321 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L + + Q+LE ++ R + N + I + + A +
Sbjct: 216 DVVTFTALMDGLCKGDRLQEAQQVLETMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEV 274
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M G+ +V N+L+ G ++ + + E G P+ TYN +I C
Sbjct: 275 FKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT-GCLPDIITYNTLIDGLC 333
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G + + +M+ K P+ + L+ GF K + + + M K + V
Sbjct: 334 KTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVV 393
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++ ++ C ++A+ LL+ M++ P++ TY L+ GF K G + A+++ M
Sbjct: 394 TFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRM 453
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC+P+ + C+ G+ A K+ + G P+ T +SL+ G +
Sbjct: 454 AKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDL 513
Query: 374 AEANELIGLMKKRFPKSGDMW 394
EA +++ +++ DM+
Sbjct: 514 EEARKMLERLERDENCKADMF 534
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 1/261 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++D A + +EM + GL+ + + L+ G + + ++F + P+ Y
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN-GDCPPDVVAY 185
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ +I C++G + +MR S P+ F L+ G K + ++ +VL+ ME
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
V Y+ I LCK + +A+ + M+ RGI+PN+ TY LIHGF ++
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A L MT GC PD + LC+ G A ++ AK P T L+
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365
Query: 366 GLASISKVAEANELIGLMKKR 386
G + ++ A L M K+
Sbjct: 366 GFCKLERIDMARTLFDDMLKQ 386
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + FE+M + V AL+ G +E +++ E + PN TY+
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL-ETMEDRNCTPNVITYS 256
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++G + M + I PN + L+ GF + + +++ M
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 316
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN I LCK R+ EA L M ++ P++ TY LI GF K ++ A
Sbjct: 317 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 376
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ LF M PD F C G + A ++ +A P T SLV G
Sbjct: 377 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDG 436
Query: 367 LASISKVAEANELIGLMKKR 386
+ ++ EA ++ M KR
Sbjct: 437 FCKVGRMVEARRVLKRMAKR 456
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
E N T+ +I C++ + A+M++K PN + +L+ GF K HK
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L+ M++ G+A V Y+ I C+ + + A L M+ G PNL TY L+ G
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+ G ++ A +L M G +PD + + LC+ G+ + ALKV + P
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183
Query: 359 TMKSLVTGLASISKVAEANELIGLMKK 385
+L+ GL ++ EA +L M++
Sbjct: 184 AYSTLIAGLCKTGRLDEACKLFEKMRE 210
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ++D A + EEM V +L+ G E +R+ K G +P
Sbjct: 402 YCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAK-RGCQP 460
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I +FC +G + Y +L EM ++PN + L+ GF E+ K+L
Sbjct: 461 NVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKML 520
Query: 241 QMMEKC-GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ +E+ + + Y + + LC+ R A LL+ + G P D Y LI G +
Sbjct: 521 ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQ 580
Query: 300 EGNLEGAKKLFASMT 314
L A ++ MT
Sbjct: 581 GKELGKAMEVLEEMT 595
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%)
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V + I I LCK R EA M +G PN TY LI+GF K + A L
Sbjct: 7 VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M G P+ + + C+ + +TA K+ R + G +P+ T +L++GL
Sbjct: 67 EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126
Query: 372 KVAEANELIGLMKKR 386
+ EA EL+ M++R
Sbjct: 127 LMDEAYELLDEMRER 141
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 132/310 (42%), Gaps = 2/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++S V+ + + + +L+E +K R L+ N + I L + + A +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMK-RKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM + G+ L+ G + + F E I P+ TY +I FC
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS-RDITPDVLTYTAIISGFC 397
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD + EM K + P++ F L+ G+ K +D +V M + G + V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I LCK + A LL M G++PN+ TY +++G K GN+E A KL
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G D+ + C+ GE + A ++ + + KG P T L+ G +
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 374 AEANELIGLM 383
+ +L+ M
Sbjct: 578 EDGEKLLNWM 587
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 169/383 (44%), Gaps = 53/383 (13%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVS-----KLSQANHFNAISQLLEEL 101
AR + +SN + +C LA S ++A S+ S KL+ + F LL +
Sbjct: 111 ARSRRDSN---LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLL--V 165
Query: 102 KTRPDLRQNER-FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
T D + R F V VL ++ A + FE+M YGL SVD+ N L LSK
Sbjct: 166 YTYKDWGSDPRVFDVFFQVLV-DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR--LSK 222
Query: 161 N-YEEVKRI--FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ Y+ I F EFP+V G+ N +YN VI C+ G + +L M K P+
Sbjct: 223 DCYKTATAIIVFREFPEV-GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDV 281
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL---CKLKRSEEA--- 271
+ ++ G+ + + + V K++++M++ G+ +Y I L CKL +EEA
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 341
Query: 272 -------------KALLDG----------------MLSRGIKPNLDTYKHLIHGFGKEGN 302
L+DG M SR I P++ TY +I GF + G+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A KLF M G EPDS F C+ G + A +V + G P+ T +
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 363 LVTGLASISKVAEANELIGLMKK 385
L+ GL + ANEL+ M K
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWK 484
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ + + A S+ E+ +R D+ + + I + Q + A +
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM GL L+ G + + ++ R+ + G PN TY +I C
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLC 467
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD S +L EM + ++PN + ++ G K E+ K++ E G+ +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + + CK ++A+ +L ML +G++P + T+ L++GF G LE +KL M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P++ F C + A + + ++G P T ++LV G +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 374 AEANELIGLMKKR 386
EA L MK +
Sbjct: 648 KEAWFLFQEMKGK 660
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 128/312 (41%), Gaps = 2/312 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ +S Q +L E+ + L + I Y +A + A +
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + G +V L+ G + + + E K+ G++PN TYN ++ C
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQPNIFTYNSIVNGLC 502
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG+ ++ E + + + L+ + K + + ++L+ M G+ +
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N+ + C E+ + LL+ ML++GI PN T+ L+ + NL+ A ++ M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G PD + C+ + A + + KG+ ST L+ G K
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 682
Query: 374 AEANELIGLMKK 385
EA E+ M++
Sbjct: 683 LEAREVFDQMRR 694
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + EM K GL+ ++ N+++ G S N EE ++ EF + G+ ++ TY
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYT 530
Query: 187 KVIKSFCESGDSSSVYSILAEMR-----------------------------------RK 211
++ ++C+SG+ IL EM K
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
I PNAT F L+ + + + + + M G+ Y ++ CK + +EA
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
L M +G ++ TY LI GF K A+++F M G D F F+
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 708
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 22/238 (9%)
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI----------LAEMRRKSIRPNAT 218
F E PK+ + + ++ ++ ++ + G V+ + L E RR +
Sbjct: 145 FWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARR--VFEKML 202
Query: 219 DFGLLLA----GFYKEHKYEDVGK------VLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
++GL+L+ Y +D K V + + G+ V YNI I +C+L R
Sbjct: 203 NYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 262
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
+EA LL M +G P++ +Y +++G+ + G L+ KL M G +P+SY +
Sbjct: 263 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 322
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A + + +G +P +L+ G + A++ M R
Sbjct: 323 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 380
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNAL---------------LLGCILSKNYEEV 165
Y ++ +D A + +EM GL+ ++ N L LL +L+K
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 166 KRIFTEFPKVY-------------------GIEPNSETYNKVIKSFCESGDSSSVYSILA 206
F K Y G+ P+ +TY ++K C++ + + +
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
EM+ K + + + +L+ GF K K+ + +V M + G+A+ +++ + K K
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 715
Query: 267 RSEEAKALLDGML 279
R + +D ++
Sbjct: 716 RPDTIVDPIDEII 728
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 143/313 (45%), Gaps = 3/313 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
L+ ++++I + L +L+ + D ++ V+ G +A M+D A
Sbjct: 162 LNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRA 221
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F+ M G+R + L+ G + + ++EV ++ E +G++P+ Y ++
Sbjct: 222 KGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEM-STHGLQPDCVIYAVLLD 280
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G + +I + RK I+P+ T +G+LL G+ E ++ L +M + G++
Sbjct: 281 YLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSP 340
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+++NI + K +EA + D M + + P + Y LI K G ++ A F
Sbjct: 341 DHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKF 400
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N G PD + F Y LC ++E A K+ + +G + + L+ L
Sbjct: 401 NQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCRE 460
Query: 371 SKVAEANELIGLM 383
+V EA LI LM
Sbjct: 461 GRVMEAQRLIDLM 473
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F +M G+ + ++L+ G +E+ +++F E GI N+ +N
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD-QGIRLNAAFFN 451
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + C G ++ M R +RP+ + L+ G + ++ K+L +M
Sbjct: 452 ILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI 511
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ YN + CK +R ++A +L ML +G+ P + TY ++HG + G A
Sbjct: 512 GLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEA 571
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+L+ +M N + D Y + + LC+ + A K+ ++ +K T+ ++
Sbjct: 572 KELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGA 631
Query: 367 LASISKVAEANEL 379
L + +A +L
Sbjct: 632 LLKGGRKEDAMDL 644
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E IF + + + + P Y +I + C+ G +M + + P+ F
Sbjct: 359 DEAMHIFDKMRQQW-LSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSS 417
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K+E K+ + GI +NI + +LC+ R EA+ L+D ML
Sbjct: 418 LVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD 477
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
++P++ +Y L+ G G ++ A KL M + G +PD + + + C+ + A
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAY 537
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ R + KG P T +++ GL I + EA EL
Sbjct: 538 SLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKEL 574
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 45/304 (14%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-----YGIEPN 181
+D A++ F+EM Y SV N LL ++ + + + F ++ + P+
Sbjct: 32 LDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPS 91
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT-DFGLLLAGFYKEHKYEDVGKVL 240
S TY +I FC G ++ + + N T FG LL G + ++ +L
Sbjct: 92 SCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDIL 151
Query: 241 -QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL-----DG----------------- 277
+ M + G V YNI ++ LC KR+EEA L+ DG
Sbjct: 152 LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDG 211
Query: 278 ----------------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
M+ +G++PN TY LIHG+ G + ++ M+ G +PD
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPD 271
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + +LC+ G A + + + KG PH + L+ G A+ ++E + +
Sbjct: 272 CVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLD 331
Query: 382 LMKK 385
LM +
Sbjct: 332 LMVR 335
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
V S ++YG + + A + F E+ G+R + N L+ E +R+
Sbjct: 414 VFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLM 473
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+V + P+ +YN ++ C +G +L M ++P+ + LL G+ K +
Sbjct: 474 LRV-DVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARR 532
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+D + + M G+ GV YN + L ++ R EAK L M++ K ++ TY
Sbjct: 533 IDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTI 592
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+++G + ++ A K+F S+ + + D + + L +GG E A+ + A G
Sbjct: 593 ILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYG 652
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
VP T + + L + E +EL M++
Sbjct: 653 LVPDVETYRLIAENLIKEGSLEELDELFSAMEE 685
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 42/297 (14%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M + +R V + N L+ G L+ +E ++ + G++P+ TYN ++
Sbjct: 466 AQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSI-GLKPDEFTYNTLL 524
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV-LQMM---EK 245
+C++ YS+ EM K + P + +L G ++ ++ + ++ L M+ K
Sbjct: 525 HGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRK 584
Query: 246 CGIAS-------------------------------GVNVYNIRIQSLCKLKRSEEAKAL 274
C I + + NI I +L K R E+A L
Sbjct: 585 CDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDL 644
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ + G+ P+++TY+ + KEG+LE +LF++M G P+S +L
Sbjct: 645 FATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLH 704
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM--KKRFPK 389
G+ A ++K +FS S + L SI AE +L + K RFP+
Sbjct: 705 RGDIGRA----GVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSLPEKYRFPQ 757
>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 257
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
N+ + +FTE + GI PN TYN +I SFC SG S +L M K I P+ F
Sbjct: 25 NHINAQNLFTEMHE-KGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTF 83
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ F KE K + ++ + M + I YN I CK R ++AK +LD M S
Sbjct: 84 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 143
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G P++ T+ LI+G+ K ++ ++F M G ++ + + CQ G+ +
Sbjct: 144 KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 203
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A + ++ G P + T ++ GL S ++ +A ++ ++K
Sbjct: 204 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+ G+ + ++ EM K I PN + ++ F ++ D ++L+ M +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I + ++ I + K ++ EA+ + ML I P TY +I GF K+ ++ AK
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++ SM + GC PD F C+ + +++ +G V + T +L+ G
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
Query: 368 ASISKVAEANELIGLM 383
+ + A +L+ M
Sbjct: 196 CQVGDLDAAQDLLNEM 211
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+M EK GI V YN I S C R +A LL M+ + I P++ T+ LI+ F KE
Sbjct: 35 EMHEK-GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKE 93
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+ A++++ M P + + C+ + A ++ + +KG P T
Sbjct: 94 RKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTF 153
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V E+ M +R
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRR 179
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 54/144 (37%)
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + I + V + + LCK A+ L M +GI PN+ TY +I F G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A +L M PD F + + A ++ + + P T S
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
++ G +V +A ++ M +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASK 144
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 37/333 (11%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ KLS+A F + L+ +L + ++ E + I YG A A++TF + +G
Sbjct: 142 IEKLSKARAFEPMETLISQLH-KSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFG 200
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
L+ SV + N LL + +K ++ V +F K +GI PN T N ++K+ C+ D +
Sbjct: 201 LQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAA 260
Query: 202 YSILAEM----------------------------RR-------KSIRPNATDFGLLLAG 226
+L EM RR + P+ T + +L+ G
Sbjct: 261 IRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDG 320
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ K+ ++ D KV+ ME+ + Y + I++ CK K+S E LLD ML + P+
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+I +EG +E A +L+ + C PD+ ++LC+ G+ A K+
Sbjct: 381 SALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKL-F 439
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
KG +P T +L+ G+ ++ EA L
Sbjct: 440 DEFEKGSIPSTLTYNALIAGMCEGGELPEAARL 472
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 131/319 (41%), Gaps = 39/319 (12%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQTFE 135
+F+ ++ L Q F+ + + + + + + N F + +V + N ID A++ E
Sbjct: 207 SFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNV-FTCNILVKALCKKNDIDAAIRVLE 265
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM G +V +L G + + +R+F E G P+ TY ++ +C+
Sbjct: 266 EMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILD-RGWVPDPTTYTILMDGYCKK 324
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ-MMEKCGIASGV-- 252
G ++ EM + PN +G+++ + KE K +V +L M+EK I S
Sbjct: 325 GRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALC 384
Query: 253 --------------------------------NVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+ + I LCK + EA+ L D
Sbjct: 385 CRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFDE-FE 443
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G P+ TY LI G + G L A +L+ +M GC P+++ + M C+ G
Sbjct: 444 KGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNARE 503
Query: 341 ALKVCRASMAKGWVPHFST 359
++V + G +P+ +T
Sbjct: 504 GIRVMEEMLDNGCLPNKAT 522
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 1/225 (0%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
N+ + +FTE + GI PN TYN +I SFC SG S +L M K I P+ F
Sbjct: 70 NHINAQNLFTEMHE-KGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTF 128
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ F KE K + ++ + M + I YN I CK R ++AK +LD M S
Sbjct: 129 SALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 188
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G P++ T+ LI+G+ K ++ ++F M G ++ + + CQ G+ +
Sbjct: 189 KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 248
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A + ++ G P + T ++ GL S ++ +A ++ ++K
Sbjct: 249 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 293
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 10/220 (4%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA-------TDFGL---LLAG 226
G PN T+N ++ S C G +++ M + +PNA D + ++
Sbjct: 5 GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDR 64
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
K+ + + + M + GI V YN I S C R +A LL M+ + I P+
Sbjct: 65 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 124
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ T+ LI+ F KE + A++++ M P + + C+ + A ++
Sbjct: 125 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 184
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +KG P T +L+ G +V E+ M +R
Sbjct: 185 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 224
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH---------- 292
M + G V +N + SLC+ R EA AL+D M+ G +PN H
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
++ K+GN A+ LF M G P+ + C G + A ++ R + K
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 353 WVPHFSTMKSLVTGLASISKVAEANEL 379
P T +L+ KV+EA E+
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEI 147
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + ++EM ++ + + N+++ G ++ KR+ G P+ T++
Sbjct: 141 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS-KGCSPDVVTFS 199
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C++ + I EM R+ I N + L+ GF + + +L M C
Sbjct: 200 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 259
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK----HLIHGFGK 299
G+A ++ + LC K +A A+L+ + + P L + I GFG+
Sbjct: 260 GVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIFFLFSLCSFILGFGE 316
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 132/310 (42%), Gaps = 2/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++S V+ + + + +L+E +K R L+ N + I L + + A +
Sbjct: 723 DVISYSTVVNGYCRFGELDKVWKLIEVMK-RKGLKPNSYIYGSIIGLLCRICKLAEAEEA 781
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM + G+ L+ G + + F E I P+ TY +I FC
Sbjct: 782 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFC 840
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD + EM K + P++ F L+ G+ K +D +V M + G + V
Sbjct: 841 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I LCK + A LL M G++PN+ TY +++G K GN+E A KL
Sbjct: 901 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G D+ + C+ GE + A ++ + + KG P T L+ G +
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020
Query: 374 AEANELIGLM 383
+ +L+ M
Sbjct: 1021 EDGEKLLNWM 1030
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 169/383 (44%), Gaps = 53/383 (13%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVS-----KLSQANHFNAISQLLEEL 101
AR + +SN + +C LA S ++A S+ S KL+ + F LL +
Sbjct: 554 ARSRRDSN---LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLL--V 608
Query: 102 KTRPDLRQNER-FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
T D + R F V VL ++ A + FE+M YGL SVD+ N L LSK
Sbjct: 609 YTYKDWGSDPRVFDVFFQVLV-DFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR--LSK 665
Query: 161 N-YEEVKRI--FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ Y+ I F EFP+V G+ N +YN VI C+ G + +L M K P+
Sbjct: 666 DCYKTATAIIVFREFPEV-GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDV 724
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL---CKLKRSEEA--- 271
+ ++ G+ + + + V K++++M++ G+ +Y I L CKL +EEA
Sbjct: 725 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE 784
Query: 272 -------------KALLDG----------------MLSRGIKPNLDTYKHLIHGFGKEGN 302
L+DG M SR I P++ TY +I GF + G+
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A KLF M G EPDS F C+ G + A +V + G P+ T +
Sbjct: 845 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 904
Query: 363 LVTGLASISKVAEANELIGLMKK 385
L+ GL + ANEL+ M K
Sbjct: 905 LIDGLCKEGDLDSANELLHEMWK 927
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ + + A S+ E+ +R D+ + + I + Q + A +
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM GL L+ G + + ++ R+ + G PN TY +I C
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLC 910
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD S +L EM + ++PN + ++ G K E+ K++ E G+ +
Sbjct: 911 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 970
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + + CK ++A+ +L ML +G++P + T+ L++GF G LE +KL M
Sbjct: 971 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1030
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P++ F C + A + + ++G P T ++LV G +
Sbjct: 1031 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090
Query: 374 AEANELIGLMKKR 386
EA L MK +
Sbjct: 1091 KEAWFLFQEMKGK 1103
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 128/312 (41%), Gaps = 2/312 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ +S Q +L E+ + L + I Y +A + A +
Sbjct: 828 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRV 886
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + G +V L+ G + + + E K+ G++PN TYN ++ C
Sbjct: 887 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQPNIFTYNSIVNGLC 945
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG+ ++ E + + + L+ + K + + ++L+ M G+ +
Sbjct: 946 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 1005
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N+ + C E+ + LL+ ML++GI PN T+ L+ + NL+ A ++ M
Sbjct: 1006 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 1065
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G PD + C+ + A + + KG+ ST L+ G K
Sbjct: 1066 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 1125
Query: 374 AEANELIGLMKK 385
EA E+ M++
Sbjct: 1126 LEAREVFDQMRR 1137
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + EM K GL+ ++ N+++ G S N EE ++ EF + G+ ++ TY
Sbjct: 915 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYT 973
Query: 187 KVIKSFCESGDSSSVYSILAEMR-----------------------------------RK 211
++ ++C+SG+ IL EM K
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1033
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
I PNAT F L+ + + + + + M G+ Y ++ CK + +EA
Sbjct: 1034 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
L M +G ++ TY LI GF K A+++F M G D F F+
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFS 1151
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 22/238 (9%)
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI----------LAEMRRKSIRPNAT 218
F E PK+ + + ++ ++ ++ + G V+ + L E RR +
Sbjct: 588 FWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARR--VFEKML 645
Query: 219 DFGLLLA----GFYKEHKYEDVGK------VLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
++GL+L+ Y +D K V + + G+ V YNI I +C+L R
Sbjct: 646 NYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRI 705
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
+EA LL M +G P++ +Y +++G+ + G L+ KL M G +P+SY +
Sbjct: 706 KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSI 765
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A + + +G +P +L+ G + A++ M R
Sbjct: 766 IGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR 823
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNAL---------------LLGCILSKNYEEV 165
Y ++ +D A + +EM GL+ ++ N L LL +L+K
Sbjct: 979 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038
Query: 166 KRIFTEFPKVY-------------------GIEPNSETYNKVIKSFCESGDSSSVYSILA 206
F K Y G+ P+ +TY ++K C++ + + +
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 1098
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
EM+ K + + + +L+ GF K K+ + +V M + G+A+ +++ + K K
Sbjct: 1099 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGK 1158
Query: 267 RSEEAKALLDGML 279
R + +D ++
Sbjct: 1159 RPDTIVDPIDEII 1171
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 146/307 (47%), Gaps = 5/307 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L +A + +LL+E+ R + NE I + Q +I+ A
Sbjct: 385 DTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICILCQKGLIEQATML 443
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M ++G ++ NAL+ G + + +F P +PN+ TY ++ C
Sbjct: 444 IEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLTGLC 499
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +LAEM +K PN F +L++ F ++ ++ ++++ M + G +
Sbjct: 500 NAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLI 559
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + + K SEEA LL G++S G+ P++ TY +I +E +E A K+F +
Sbjct: 560 TYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIV 619
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G P + + LC+ + A+ ++ G +P+ T +L+ GLA+ +
Sbjct: 620 QDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFL 679
Query: 374 AEANELI 380
E +L+
Sbjct: 680 KETRDLL 686
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM+ +EM G ++ N ++ G ++ + YG +P++ +Y V
Sbjct: 229 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS-YGFQPDTVSYTTV 287
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + V + AEM K+ PN F +L+ F + E +VL+ M G
Sbjct: 288 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 347
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A+ + NI I ++CK R ++A L+ M S G P+ +Y ++ G + E AK+
Sbjct: 348 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 407
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M C P+ F F LCQ G E A + G + T +LV G
Sbjct: 408 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 467
Query: 369 SISKVAEANEL 379
+V A EL
Sbjct: 468 VQGRVDSALEL 478
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++ G V A N L+ G + +R+ P + P++ TY +I
Sbjct: 128 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPII 183
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ G S+L +M + +P+ + +LL K + +VL M G
Sbjct: 184 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 243
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN+ I +C+ R ++A+ L+ + S G +P+ +Y ++ G E ++L
Sbjct: 244 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 303
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
FA M C P+ F M F C+GG E A++V G + + ++ +
Sbjct: 304 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 363
Query: 370 ISKVAEANELIGLM 383
+V +A + + M
Sbjct: 364 QGRVDDAFQFLNNM 377
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +++ + + ++ F ++L+E++ + P++ +++++ G + +D A
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNI------VTYNVIINGMCREGRVDDA 265
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + YG + + +L G +K +E+V+ +F E + PN T++ +++
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME-KNCMPNEVTFDMLVR 324
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC G +L +M N T +++ K+ + +D + L M G +
Sbjct: 325 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 384
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y ++ LC+ +R E+AK LL M+ + PN T+ I ++G +E A L
Sbjct: 385 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 444
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ GCE + + C G ++AL++ + K P+ T +L+TGL +
Sbjct: 445 EQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNA 501
Query: 371 SKVAEANELIGLMKKR 386
++ A EL+ M ++
Sbjct: 502 ERLDAAAELLAEMLQK 517
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TY ++++ C+S +L EMR K PN + +++ G +E + +D
Sbjct: 206 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 265
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ L + G Y ++ LC KR E+ + L M+ + PN T+ L+
Sbjct: 266 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 325
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F + G +E A ++ M+ GC ++ + +C+ G + A + + G P
Sbjct: 326 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 385
Query: 357 FSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNA 396
+ +++ GL + +A EL+ +++K P + +N
Sbjct: 386 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ K+I++ C G +S +L R + + L+AG+ + + +
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M +A Y I+ LC R EA +LLD ML RG +P++ TY L+
Sbjct: 164 RRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 220
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K A ++ M GC P+ + + +C+ G + A + + G+ P
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +++ GL + + + EL M ++
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 95/242 (39%), Gaps = 37/242 (15%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ L A +A ++LL E+ + F+V + + Q ++D A++ E
Sbjct: 489 ITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL-VSFFCQKGLMDEAIELVE 547
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M ++G PN TYN ++ +
Sbjct: 548 QMMEHG------------------------------------CTPNLITYNTLLDGITKD 571
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+S +L + + P+ + ++ +E + E+ K+ +++ G+ +Y
Sbjct: 572 CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIY 631
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + +LCK ++ A M+S G PN TY LI G E L+ + L + +
Sbjct: 632 NKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCS 691
Query: 316 GG 317
G
Sbjct: 692 RG 693
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 148/310 (47%), Gaps = 6/310 (1%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D ++++ + L +A + +LL+E+ R + NE I + Q +I+ A
Sbjct: 352 SP-DTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
E+M ++G ++ NAL+ G + + +F P +PN+ TY ++
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLT 465
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + + +LAEM +K PN F +L++ F ++ ++ ++++ M + G
Sbjct: 466 GLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 525
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN + + K SEEA LL G++S G+ P++ TY +I +E +E A K+F
Sbjct: 526 NLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 585
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ + G P + + LC+ + A+ ++ G +P+ T +L+ GLA+
Sbjct: 586 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645
Query: 371 SKVAEANELI 380
+ E +L+
Sbjct: 646 DFLKETRDLL 655
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM+ +EM G ++ N ++ G ++ + YG +P++ +Y V
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS-YGFQPDTVSYTTV 256
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + V + AEM K+ PN F +L+ F + E +VL+ M G
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A+ + NI I ++CK R ++A L+ M S G P+ +Y ++ G + E AK+
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M C P+ F F LCQ G E A + G + T +LV G
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436
Query: 369 SISKVAEANEL 379
+V A EL
Sbjct: 437 VQGRVDSALEL 447
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++ G V A N L+ G + +R+ P + P++ TY +I
Sbjct: 97 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPII 152
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ G S+L +M + +P+ + +LL K + +VL M G
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN+ I +C+ R ++A+ L+ + S G +P+ +Y ++ G E ++L
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
FA M C P+ F M F C+GG E A++V G + + ++ +
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 370 ISKVAEANELIGLM 383
+V +A + + M
Sbjct: 333 QGRVDDAFQFLNNM 346
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +++ + + ++ F ++L+E++ + P++ +++++ G + +D A
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNI------VTYNVIINGMCREGRVDDA 234
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + YG + + +L G +K +E+V+ +F E + PN T++ +++
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME-KNCMPNEVTFDMLVR 293
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC G +L +M N T +++ K+ + +D + L M G +
Sbjct: 294 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y ++ LC+ +R E+AK LL M+ + PN T+ I ++G +E A L
Sbjct: 354 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 413
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ GCE + + C G ++AL++ + K P+ T +L+TGL +
Sbjct: 414 EQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNA 470
Query: 371 SKVAEANELIGLMKKR 386
++ A EL+ M ++
Sbjct: 471 ERLDAAAELLAEMLQK 486
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TY ++++ C+S +L EMR K PN + +++ G +E + +D
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ L + G Y ++ LC KR E+ + L M+ + PN T+ L+
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F + G +E A ++ M+ GC ++ + +C+ G + A + + G P
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 357 FSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWN 395
+ +++ GL + +A EL+ +++K P + +N
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ K+I++ C G +S +L R + + L+AG+ + + +
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M +A Y I+ LC R EA +LLD ML RG +P++ TY L+
Sbjct: 133 RRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K A ++ M GC P+ + + +C+ G + A + + G+ P
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +++ GL + + + EL M ++
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 98/249 (39%), Gaps = 38/249 (15%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P P + + ++ ++ L A +A ++LL E+ + F+V + + Q ++D
Sbjct: 452 PCKP-NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL-VSFFCQKGLMD 509
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ E+M ++G PN TYN +
Sbjct: 510 EAIELVEQMMEHG------------------------------------CTPNLITYNTL 533
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + +S +L + + P+ + ++ +E + E+ K+ +++ G+
Sbjct: 534 LDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 593
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+YN + +LCK ++ A M+S G PN TY LI G E L+ +
Sbjct: 594 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 653
Query: 309 LFASMTNGG 317
L + + G
Sbjct: 654 LLRELCSRG 662
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 3/138 (2%)
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
AS N N R++ L EA L+D SRG P++ LI + G A +
Sbjct: 40 ASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 99
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ + G D + + C+ G+ + A ++ ASM P T ++ GL
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI-ASMPVA--PDAYTYTPIIRGLC 156
Query: 369 SISKVAEANELIGLMKKR 386
+V EA L+ M R
Sbjct: 157 DRGRVGEALSLLDDMLHR 174
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 152/358 (42%), Gaps = 47/358 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMID 128
D + + + L Q + N QL +E+ R ++ +SI++ G + D
Sbjct: 416 DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 475
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + FEEM G+ V + L+ G LS +E+ K +F E V GI+P+ T + +
Sbjct: 476 EARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV-GIQPDVTTSSVL 534
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+ G +L + ++ + L+ G +H+ ++ M+K G
Sbjct: 535 IDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 594
Query: 249 AS-----------------------------------GVNV------YNIRIQSLCKLKR 267
G+N Y+I I LCK R
Sbjct: 595 MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 654
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA+ L M + G+ P++ +Y LIHGF + G + AK LF M + G +PD F +
Sbjct: 655 EDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSV 714
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC+ G+ A ++ + +G +P+ T +LV GL +++EA +L M+K
Sbjct: 715 LIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 772
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 11/269 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE---EVKRIFTEFPKVYGI--EPN 181
I A Q F +M K G +V L+ G S N + E+ + YGI +PN
Sbjct: 579 ISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPN 638
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ +Y+ +I C+ G + EM+ + P+ + L+ GF + K++D +
Sbjct: 639 AISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFN 698
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ V +++ I LCK + EA LL+ M+ RG PN TY L+ G
Sbjct: 699 EMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMND 758
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK------GWVP 355
+ A +LF M GC PD + LCQ G +TAL++ + ++ + P
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMK 384
+ ++ GL + EA EL MK
Sbjct: 819 DVISYSIIIDGLCKHGREDEARELFKEMK 847
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 112/272 (41%), Gaps = 12/272 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF---PKVYGIE--PN 181
I A F M K G R L+ G + N ++ E YGI+ P
Sbjct: 105 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 164
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+Y+ +I C+ + EM+ + + P+ + L+ GF K+E +
Sbjct: 165 LISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFN 224
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M GI V + I CK + EA LL+ M+ RG ++ TY LI G +
Sbjct: 225 EMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKH 284
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM-------AKGWV 354
+ A +LF SM GC PD+ + LCQ G+ AL + + + K
Sbjct: 285 RISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIR 344
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P +T L+ L KV EANEL+ +M +R
Sbjct: 345 PDVTTSSMLIDILCKEGKVIEANELLEVMIQR 376
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 144/336 (42%), Gaps = 35/336 (10%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNERFHVHSIVLYG------- 122
LD + +S + L + + + L +++L RPD + YG
Sbjct: 87 LDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPD-----------AITYGTLMKGLC 135
Query: 123 QANMIDHAMQTFEEM----DKYGLR--QSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
Q I+ A+Q +EM +YG++ ++ + + ++ G + +E + +F E K
Sbjct: 136 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEM-KAQ 194
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +Y +I FC SG + EM I+P+ T G+L+ F KE K +
Sbjct: 195 GMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEA 254
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L++M G + Y+ I+ LC R EA L M G +P+ Y L+ G
Sbjct: 255 NELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKG 314
Query: 297 FGKEGNLEGAKKLFASMTNGGCE-------PDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ G + A L M N + PD M LC+ G+ A ++ +
Sbjct: 315 LCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMI 374
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+G + T +L+ GL +++EA L M+K
Sbjct: 375 QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 44/270 (16%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI++ G + D A + F+EM G+ V + +L+ G S +++ K +F E
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G++P+ T++ +I C+ G +L M ++ PN + L+ G +
Sbjct: 702 DI-GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760
Query: 234 EDVGKVLQMMEKCGIASGV--------------NV------------------------- 254
+ ++ M+K G V N+
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820
Query: 255 --YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+I I LCK R +EA+ L M + G+ PN+ +Y LIHGF + G LE AK LF
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
M + G + ++ + + + C+ G+ + AL
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 145/366 (39%), Gaps = 54/366 (14%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMID 128
D + + + L Q + N QL +E+ R ++ +SI++ G + D
Sbjct: 123 DAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRRED 182
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F+EM G+ V + +L+ G S +E+ K +F E V GI+P+ T +
Sbjct: 183 EARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV-GIQPDVTTSGVL 241
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG- 247
I FC+ G +L M + + + L+ G +H+ + ++ M+K G
Sbjct: 242 IDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGC 301
Query: 248 ----IASG-----------VNV--------------YNIR------------IQSLCKLK 266
IA G +N+ Y I+ I LCK
Sbjct: 302 RPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEG 361
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ EA LL+ M+ RG ++ TY LI G E + A LF SM GC PD+ +
Sbjct: 362 KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 421
Query: 327 MFTYFLCQGGEYETALKVCRASMAKG------WVPHFSTMKSLVTGLASISKVAEANELI 380
LCQ G AL++ + + P + ++ GL + EA EL
Sbjct: 422 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 481
Query: 381 GLMKKR 386
MK +
Sbjct: 482 EEMKAQ 487
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 11/269 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF---PKVYGIE--PN 181
I A F M K G R L+ G + N ++ E YGI+ P
Sbjct: 398 ISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPT 457
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+Y+ +I C+ + EM+ + I P+ + L+ GF K+E +
Sbjct: 458 LISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 517
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M GI V ++ I LCK + EA LL+ ++ RG ++ T L+ G +
Sbjct: 518 EMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKH 577
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK------GWVP 355
+ A +LF M GC P+ LCQ G + AL++ + ++ P
Sbjct: 578 RISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKP 637
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + ++ GL + EA EL MK
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMK 666
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 32/219 (14%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
++ G+ P+S T+N +I C + + +A + R+ P+ +
Sbjct: 2 RLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYS------------ 49
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
I V ++ I LCK + EA LL+ M+ RG ++ TY L
Sbjct: 50 --------------IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTL 95
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG- 352
I G E + A LF SM GC PD+ + LCQ G AL++ + +
Sbjct: 96 IKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTG 155
Query: 353 -----WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P + ++ GL + EA EL MK +
Sbjct: 156 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 194
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 3/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
I +A M + GL ++ N ++ G CIL + + + + G N TY
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR--GHSANLVTY 633
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +IK +C+SG+++S IL MR +P+ + L+ GF K K E + M
Sbjct: 634 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 693
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y I CK ++ + A +LL+ M G +PN+ TY LIHG K+ N G
Sbjct: 694 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 753
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++L M G P+ + LC+ G AL++ + +G +P+ T SL+
Sbjct: 754 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 813
Query: 366 GLASISKVAEANELIGLMKK 385
L KV EA L +++
Sbjct: 814 ALGQEGKVEEAENLFAELER 833
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EM +G+ + ++ YE+ R+F + K G EPN TY
Sbjct: 471 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM-KNKGCEPNVYTYT 529
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C SG + M R + PN + L+ + + + VL +M +
Sbjct: 530 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 589
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + + YN I+ C L ++A +++ ML RG NL TY +I G+ GN A
Sbjct: 590 GLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 649
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M +GGC+PD + + C+ + E+A + + G P+ T +L+ G
Sbjct: 650 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 709
Query: 367 LASISKVAEANELIGLMKK 385
K+ A L+ MK+
Sbjct: 710 YCKDEKLDTATSLLEHMKR 728
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 108/248 (43%), Gaps = 3/248 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIE 179
Y + A++ + M G + + L+ G C +SK E +F E G+
Sbjct: 640 YCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK-MESAFGLFNEMVD-DGLC 697
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY +I +C+ + S+L M+R RPN + +L+ G K++ + ++
Sbjct: 698 PNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEEL 757
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++M + GI V Y I LCK + A + + M+ +G PNL TY LI G+
Sbjct: 758 CKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQ 817
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG +E A+ LFA + G PD + G+ E A + G P T
Sbjct: 818 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 877
Query: 360 MKSLVTGL 367
L+ GL
Sbjct: 878 YGVLIKGL 885
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 9/259 (3%)
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
M + + + GLR + A +ALL+ + + + R+ +E G++PN YN
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-----GVQPNLLIYN 389
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI + C+ G+ + +I+ ++ + P+ + ++ G ++H + +V M K
Sbjct: 390 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 449
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y+ I LC R EA L+ M+ GI P T I G E A
Sbjct: 450 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 509
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M N GCEP+ Y + LC G + A+ + G P+ T +L+
Sbjct: 510 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 569
Query: 367 LASISKVAEANELIGLMKK 385
L ++ A ++ LM +
Sbjct: 570 LVENRRIKYAFVVLNLMGR 588
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM M + G ++ N ++ G S N RI + + G +P+ +Y ++I
Sbjct: 614 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL-DLMRDGGCKPDEWSYTELI 672
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ S + + EM + PN + L+ G+ K+ K + +L+ M++ G
Sbjct: 673 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 732
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN+ I L K A+ L M+ GI PN+ TY +I G K G+ A ++
Sbjct: 733 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 792
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M GC P+ + L Q G+ E A + G +P T ++
Sbjct: 793 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 852
Query: 370 ISKVAEANELIGLMKK 385
KV A +G M K
Sbjct: 853 SGKVEHAFNFLGRMIK 868
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 143/338 (42%), Gaps = 31/338 (9%)
Query: 53 SNPFRILDICCGASLAPE--SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN 110
++ RILD+ P+ S + + +SK+ A F ++++++ L N
Sbjct: 647 TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA--FGLFNEMVDD-----GLCPN 699
Query: 111 ERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY---EEVKR 167
E + I Y + +D A E M + G R +V N L+ G N+ EE+ +
Sbjct: 700 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 759
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E GI PN TY +I C++G +S + +M + PN + L+
Sbjct: 760 VMIE----EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 815
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+E K E+ + +E+ G+ Y I++ + E A L M+ G +P L
Sbjct: 816 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 875
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LI G E L A + A++ PD F Y + A+ V A
Sbjct: 876 WTYGVLIKGLKNEYLL--ADQRLAAL------PDVVPNCSFGYQTTD----QDAVSVMSA 923
Query: 348 SMAKGWVPHFS--TMKSLVTGLASISKVAEANELIGLM 383
+A+ P S +LV+ L++ + EANEL+G M
Sbjct: 924 KLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 960
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 25/281 (8%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F +M + G ++ ++L+ EE + +F E + +G+ P+ TY K+I
Sbjct: 789 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER-HGLIPDEITYVKMI 847
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED--VGKVLQMMEKCG 247
+++ SG ++ L M + +P +G+L+ G E+ D + + ++ C
Sbjct: 848 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 907
Query: 248 IAS----------------------GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
V V N + +L R EA LL M+S+G+ P
Sbjct: 908 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 967
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ + Y L+ + N++ A +F M+ GCE + LCQ + A
Sbjct: 968 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 1027
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + W P L+ GL E + +M+ R
Sbjct: 1028 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 1068
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 5/263 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE--PNSE 183
M M + M G++ ++ NA++ N + + I KV+ E P++
Sbjct: 365 MTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMK---KVFESEMSPDTF 421
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I C D S + +M ++ PN + L+ G + + +++ M
Sbjct: 422 TYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
GI + I +LC + E+A L M ++G +PN+ TY LI G G L
Sbjct: 482 ILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLL 541
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A LF M+ G P++ + L + + A V G + T +
Sbjct: 542 KVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEM 601
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ G + +A ++ M +R
Sbjct: 602 IKGYCILGDPKKAMLVMNNMLQR 624
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 148/315 (46%), Gaps = 12/315 (3%)
Query: 76 MAFSIAVSKL-SQANHFNAISQLLEELKT--RPDLRQNERFHVHSIVLYGQANM--IDHA 130
+ F+ +S L S+A +A+ E +K PD+ +S ++ G M A
Sbjct: 11 VTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVI------TYSTIINGLCKMGNTTMA 64
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+Q ++M++ G + +V A N ++ + E F+E K GI P+ TY+ ++
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVK-EGIPPDVFTYSSILH 123
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC G + S+ +M +++ PN F +L+ G K+ + V + M + G+
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN + C + +EA+ L + M +G PN+ +Y LI+G K G ++ AK L
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
A M++ PD + + CQ G + A ++ + + G +P+ T ++ GL
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 371 SKVAEANELIGLMKK 385
+ EA EL+ M++
Sbjct: 304 GHLDEAFELLKAMQE 318
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 138/311 (44%), Gaps = 6/311 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDH 129
P D +S + N + L +++ R + F +I++ G + MI
Sbjct: 112 PPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTF---TILIDGLCKKRMISE 168
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A FE M + GL V NAL+ G +E +++F + G PN +YN +I
Sbjct: 169 AWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDR-KGCAPNVRSYNILI 227
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+SG +LAEM KS+ P+ + L+ GF + + ++ ++L+ M G+
Sbjct: 228 NGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLL 287
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+I + LCK +EA LL M I+PN+ Y LI G G LE A++L
Sbjct: 288 PNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAAREL 347
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F+++ G +P + + L +GG A ++ R G +P+ T ++ G
Sbjct: 348 FSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLR 407
Query: 370 ISKVAEANELI 380
A LI
Sbjct: 408 NGDTPNAVRLI 418
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 133/290 (45%), Gaps = 2/290 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+++ F+I + L + + + L+ E T L + + + Y + +D A +
Sbjct: 149 NKVTFTILIDGLCKKRMISE-AWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKL 207
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F MD+ G +V + N L+ G S +E K + E + P+ TY+ +++ FC
Sbjct: 208 FNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSH-KSLTPDIFTYSTLMRGFC 266
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G +L EM + PN + ++L G K ++ ++L+ M++ I +
Sbjct: 267 QVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIF 326
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I I+ +C + E A+ L + +GI+P + TY +I G K G A +LF M
Sbjct: 327 IYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREM 386
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
GC P+S + + + G+ A+++ + KG+ ST + L
Sbjct: 387 AVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 110/250 (44%), Gaps = 1/250 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K GL+ ++ N LL G + ++F E K+ G EP+ TY+ +I C+ G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKM-GHEPDVITYSTIINGLCKMG 59
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+++ +L +M K +PN + ++ K+ + M K GI V Y+
Sbjct: 60 NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ C L R EA +L M+ R + PN T+ LI G K+ + A +F +MT
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G EPD Y + C + + A K+ KG P+ + L+ G ++ EA
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239
Query: 377 NELIGLMKKR 386
L+ M +
Sbjct: 240 KGLLAEMSHK 249
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 9/246 (3%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLR 143
SQ + + +++ P++R ++I++ G ++ ID A EM L
Sbjct: 199 SQMDEAQKLFNIMDRKGCAPNVRS------YNILINGHCKSGRIDEAKGLLAEMSHKSLT 252
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
+ + L+ G +E + + E YG+ PN TY+ V+ C+ G +
Sbjct: 253 PDIFTYSTLMRGFCQVGRPQEAQELLKEMCS-YGLLPNLITYSIVLDGLCKHGHLDEAFE 311
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+L M+ I PN + +L+ G K E ++ + GI V Y + I L
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
K S EA L M G PN TY +I GF + G+ A +L M G DS
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSS 431
Query: 324 CFFMFT 329
F M +
Sbjct: 432 TFRMLS 437
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A++ + M G++ ++ + L+ G + K++ +F +F K G
Sbjct: 466 INLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD-G 524
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I +FC G+ ++ +M+++ RP F ++ GF + +
Sbjct: 525 LKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRAL 584
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ MM + G V+ YN I L + ++ +A A+LD M G+ PN TY L+ G+
Sbjct: 585 EIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGY 644
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ E A + F + N G E D Y + C+ G ++AL V + AK +
Sbjct: 645 ASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNT 704
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A V EA +L+ M+K
Sbjct: 705 FVYNILIDGWARRGDVWEAADLMQQMRK 732
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 147/382 (38%), Gaps = 49/382 (12%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+LK +N F + + L P+ L +I + N AI + + K R
Sbjct: 506 KLKDWANAFSVFEDFTKDGLKPDVVLYN---NIITAFCGMGNMDRAICMVRQMQKER--H 560
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R R + I + +A + A++ F+ M + G +V NAL+LG + + +
Sbjct: 561 RPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVA 620
Query: 168 IFTEFPKVYGIEPNSETYNKV-----------------------------------IKSF 192
I E V G+ PN TY + +KS
Sbjct: 621 ILDEM-NVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSC 679
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+SG S ++ EM K+I N + +L+ G+ + + ++Q M K G+ +
Sbjct: 680 CKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDI 739
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y I + CK ++A ++ M + GIKPNL TY LI+G+ + E A F
Sbjct: 740 HTYTSFINACCKAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEE 799
Query: 313 MTNGGCEPDSYCFFMFTYFL------CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +PD + L Q Y L VCR + + T
Sbjct: 800 MKLAGFKPDKAVYHCLVTSLLSRATFAQSYVYSGLLSVCREMIESEMIVDMGTAVHWSRC 859
Query: 367 LASISKVAEANELIGLMKKRFP 388
L I + EL ++K FP
Sbjct: 860 LRKIERT--GGELTEALQKTFP 879
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 132/310 (42%), Gaps = 4/310 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
+ +SI V ++ + +A EE K + P L N + I + Q +D A
Sbjct: 355 VTYSIIVGGFAKMGNADAADHWFEEAKEKLPSL--NAVIYGGIIYAHCQICNMDRAEALV 412
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM++ G+ +D + ++ G + N E+ +F K G P+ +Y +I + +
Sbjct: 413 REMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL-KECGFFPSVISYGCLINLYTK 471
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G S I M+ I+ N + +L+ GF K + + V + K G+ V +
Sbjct: 472 VGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVL 531
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I + C + + A ++ M +P T+ +IHGF + G + A ++F M
Sbjct: 532 YNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMR 591
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC P + + L + + A+ + G P+ T +L+ G AS+
Sbjct: 592 RSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGPNEHTYTTLMQGYASLGDTE 651
Query: 375 EANELIGLMK 384
+A + +++
Sbjct: 652 KAFQYFTVLR 661
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 120/300 (40%), Gaps = 36/300 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG+ + HA QTFE M G+ S ++L+ + ++ EE + K GIE
Sbjct: 294 YGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKM-KEEGIEM 352
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
TY+ ++ F + G++ + E + K NA +G ++ + + ++
Sbjct: 353 TIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALV 412
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD------------------------ 276
+ ME+ GI + +++Y+ + + E+ + D
Sbjct: 413 REMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKV 472
Query: 277 GMLSR-----------GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
G +S+ GIK N+ TY LI+GF K + A +F T G +PD +
Sbjct: 473 GKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLY 532
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C G + A+ + R + P T ++ G A ++ A E+ +M++
Sbjct: 533 NNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRR 592
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 92/230 (40%), Gaps = 6/230 (2%)
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
IL E + + T F ++ +P + Y ++K + GD MR + I P+
Sbjct: 261 ILETQPENWQAVVTAFERIK--KPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPS 318
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ + L+ + E+ ++ M++ GI + Y+I + K+ ++ A +
Sbjct: 319 SHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFE 378
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQ 334
+ N Y +I+ + N++ A+ L M G + D Y M Y +
Sbjct: 379 EAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMI- 437
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G E L V G+ P + L+ + KV++A E+ +MK
Sbjct: 438 -GNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMK 486
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%)
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
KP Y ++ +G+ G++ A++ F SM G EP S+ + + G + E AL
Sbjct: 281 KPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALH 340
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
R +G T +V G A + A+ K++ P
Sbjct: 341 CVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLP 385
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 143/331 (43%), Gaps = 28/331 (8%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL--YGQANMID 128
D +S ++ L +A L +E+K+ PD+ + ++I++ + + +I+
Sbjct: 454 DTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDV------YTYTILIDSFCKVGLIE 507
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F+EM+ G SV ALL + +K + IF G PN+ TY+ +
Sbjct: 508 QARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA-GCAPNTITYSAL 566
Query: 189 IKSFCESGDSSSVYSILAEM----------------RRKSIRPNATDFGLLLAGFYKEHK 232
+ C++G+S + A+M SI PN +G L+ G K HK
Sbjct: 567 VDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHK 626
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
D ++L +M G +Y+ I CK+ + + A+ + M G P + TY
Sbjct: 627 VVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTS 686
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI K+ L+ A K+ + M C P+ + LC+ GE + ALK+ +G
Sbjct: 687 LIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRG 746
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P+ T SL+ GL KV + +L M
Sbjct: 747 CNPNVVTYTSLIDGLGKSGKVDMSLQLFTQM 777
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 96/233 (41%), Gaps = 13/233 (5%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EPN Y+ +I FC+ G + + M + P + L+ +K+ + +
Sbjct: 641 GCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 700
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KVL M + V Y I LC++ ++A LL M RG PN+ TY LI G
Sbjct: 701 IKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDG 760
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
GK G ++ + +LF M GC P+ + + C G + A + W +
Sbjct: 761 LGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKY 820
Query: 357 FSTMKSLVTG-----LASISKVAEANE--------LIGLMKKRFPKSGDMWNA 396
S+V G +AS+ + E + GL+ F K+G + A
Sbjct: 821 VQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKA 873
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C G + I+ M RK P+ + + ++ + K E + Q M+ G+
Sbjct: 428 RCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVI 487
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I I S CK+ E+A++ D M S G P++ TY L+H + K + A +
Sbjct: 488 PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM-----------------AKG 352
F M + GC P++ + LC+ GE + A +V A M
Sbjct: 548 FHRMVDAGCAPNTITYSALVDGLCKAGESQKACEV-YAKMIGTSDNVGSDFYFEGEHTDS 606
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P+ T +L+ GL KV +A EL+ +M
Sbjct: 607 IAPNVVTYGALIDGLCKAHKVVDAQELLDVM 637
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 6/205 (2%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++I E+ S L MR S PN + LLAGF K+ + +++ MM
Sbjct: 278 TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMN 337
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF--GKE--- 300
G +++N + S C + A LL+ M G P Y I G+E
Sbjct: 338 EGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPS 397
Query: 301 -GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
L A+K++ M C + F LC G+++ A ++ + M KG+VP ST
Sbjct: 398 PDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTST 457
Query: 360 MKSLVTGLASISKVAEANELIGLMK 384
++T L KV +A L MK
Sbjct: 458 YSKVITFLCEAMKVEKAFLLFQEMK 482
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 13/243 (5%)
Query: 149 LNALLLGCI----LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
LN ++ C +K EE+ R+ K +G P+ TYN +++ +G + +
Sbjct: 175 LNVIVRKCCRHGAWAKALEELGRL-----KDFGYRPSGATYNALVQVLATAGQMDMGFRV 229
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
EM + G KE ++ D L M+E+ + I L +
Sbjct: 230 QKEMSELGFCTDKFTVGCFAQALCKEGRWSDA---LVMIEREDFKLDTVLCTQMISGLME 286
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+EA + L M PN+ TY+ L+ GF K+ L K++ + M N GC P+
Sbjct: 287 ASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSL 346
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
F + C +Y A K+ G P + + + S ++ + +L+ L +
Sbjct: 347 FNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELP-SPDLLALAE 405
Query: 385 KRF 387
K +
Sbjct: 406 KVY 408
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 107/297 (36%), Gaps = 41/297 (13%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + +D+A + F M K G +V +L+ + + ++ ++ + P
Sbjct: 656 FCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES-SCTP 714
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I C G+ +L+ M ++ PN + L+ G K K + ++
Sbjct: 715 NVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLF 774
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD------------------------ 276
M G A Y + I C +EA +LL
Sbjct: 775 TQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKK 834
Query: 277 -----GML----SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG-----CEPDS 322
G+L S G+ Y LI F K G LE A +L M D+
Sbjct: 835 FIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDT 894
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
Y + LC + E A ++ KG VP S L+ GL ++K EA +L
Sbjct: 895 YTSLIQA--LCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQL 949
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G++ +D ++Q F +M G + L+ C + +E + +E + Y +
Sbjct: 762 GKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPK-Y 820
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL- 240
+ Y V++ F + +S +L E+ + A +GLL+ F K + E ++
Sbjct: 821 VQGYCSVVQGFSKKFIAS--LGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHK 878
Query: 241 QMMEKCGIASGVNV-----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+MME ++S +N+ Y IQ+LC + E+A L + +G+ P L + LI
Sbjct: 879 EMME---VSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIK 935
Query: 296 GFGKEGNLEGAKKLFASMTNGG 317
G K A +L SM + G
Sbjct: 936 GLIKVNKWNEALQLCYSMCDEG 957
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A+Q + M G++ ++ + L+ G + K++ +F +F K G
Sbjct: 456 INLYTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKD-G 514
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I +FC + ++ +M+++ RP F ++ GF + +
Sbjct: 515 LKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRAL 574
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ MM + G V+ YN I L + ++ +A A+LD M G+ PN TY L+ G+
Sbjct: 575 EIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGY 634
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ E A + F+ + N G E D Y + C+ G ++AL V + AK +
Sbjct: 635 ASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIPRNT 694
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A V EA +L+ M+K
Sbjct: 695 FVYNILIDGWARRGDVWEAADLMQQMRK 722
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 150/390 (38%), Gaps = 49/390 (12%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+LK +N F + + L P+ L +I + +N AI + + K R
Sbjct: 496 KLKDWANAFSVFEDFTKDGLKPDVVLYN---NIITAFCGMSNMDRAICMVKQMQKER--Y 550
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R R + I + +A + A++ F+ M + G +V NAL+LG + + +
Sbjct: 551 RPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVA 610
Query: 168 IFTEFPKVYGIEPNSETYNKV-----------------------------------IKSF 192
I + V G+ PN TY + +KS
Sbjct: 611 ILDQM-NVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSC 669
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+SG S ++ EM K+I N + +L+ G+ + + ++Q M K G+ +
Sbjct: 670 CKSGRMQSALAVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDI 729
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y + + CK ++A ++ M + GIKPNL TY LI+G+ + E A F
Sbjct: 730 HTYTSFVNACCKAGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEE 789
Query: 313 MTNGGCEPDSYCFF-MFTYFL-----CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M +PD + + T L Q Y L VCR + T
Sbjct: 790 MKLAELKPDKAAYHCLMTSLLSRATFAQSYVYSGLLSVCREMIESEMTVDMGTAVHWSRC 849
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNA 396
L I + EL ++K FP NA
Sbjct: 850 LRKIERT--GGELTEALQKTFPPDWTSHNA 877
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 4/310 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
+ +SI V ++ +A +E K + P L N + I + Q +D A
Sbjct: 345 VTYSIIVGGFAKMGKADAADHWFKEAKEKLPSL--NAVTYGSIIYAHCQTCNMDRAEALV 402
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM+ G+ +D + ++ G + N E+ +F K G P+ +Y +I + +
Sbjct: 403 REMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRL-KECGFSPSVISYGCLINLYTK 461
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G S I M+ I+ N + +L+ GF K + + V + K G+ V +
Sbjct: 462 IGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVL 521
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I + C + + A ++ M +P T+ +IHGF + G + A ++F M
Sbjct: 522 YNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMR 581
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC P + + L + + A+ + G P+ T +L+ G AS+
Sbjct: 582 RSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTE 641
Query: 375 EANELIGLMK 384
+A + +++
Sbjct: 642 KAFQYFSVLR 651
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/335 (19%), Positives = 132/335 (39%), Gaps = 41/335 (12%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQS 145
+Q ++ A+ E +K +P ++ + + Y + + HA QTFE M G+ S
Sbjct: 254 TQPENWQAVVTAFERIK-KPARKE----YGLMVKYYARRGDMHHARQTFESMQARGIEPS 308
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
++L+ + ++ EE + K GIE TY+ ++ F + G + +
Sbjct: 309 SHVYSSLIHAYAVGRDMEEALHCVRKM-KEEGIEMTIVTYSIIVGGFAKMGKADAADHWF 367
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
E + K NA +G ++ + + +++ ME GI + +++Y+ + +
Sbjct: 368 KEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMI 427
Query: 266 KRSEEAKALLD------------------------GMLSR-----------GIKPNLDTY 290
E+ + D G +S+ GIK N+ TY
Sbjct: 428 GNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTY 487
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI+GF K + A +F T G +PD + C + A+ + +
Sbjct: 488 SMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQK 547
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ + P T ++ G A ++ A E+ +M++
Sbjct: 548 ERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRR 582
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 93/230 (40%), Gaps = 6/230 (2%)
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+L E + + T F ++ +P + Y ++K + GD M+ + I P+
Sbjct: 251 VLETQPENWQAVVTAFERIK--KPARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPS 308
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ + L+ + E+ ++ M++ GI + Y+I + K+ +++ A
Sbjct: 309 SHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFK 368
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQ 334
+ N TY +I+ + N++ A+ L M G + D Y M Y +
Sbjct: 369 EAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMI- 427
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G E L V G+ P + L+ I KV++A ++ +MK
Sbjct: 428 -GNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMK 476
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 33/324 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++ I V+ L + F + L E++ D N+ Y +AN+ A++ F+
Sbjct: 114 SYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDR 173
Query: 137 MDKYGLRQSVDALNALLLGCILSKN-------YEEVKRIFTEFPKVY------------- 176
M ++GLR SVD L+ LL K+ ++ VK F K Y
Sbjct: 174 MAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEA 233
Query: 177 -------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
G + YN ++++ C+ G+ Y + E+ + P+A + +
Sbjct: 234 VEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIF 293
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ + + + V VL M++ + V YN I+ LCK + E+A LL M+ RG+
Sbjct: 294 IRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGV 353
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ +Y ++ + + A KL + M C PD + + M L + G ++ A +
Sbjct: 354 SPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATE 413
Query: 344 VCRASMAKGWVPHFSTMKSLVTGL 367
+ + +G+ P ST ++ GL
Sbjct: 414 IWESMGERGFYPSVSTYSVMIHGL 437
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 145/323 (44%), Gaps = 14/323 (4%)
Query: 45 TIARLKSESNPFRILDICCGASLAPE-SPLDRMAFSIAVSKLSQANHFNAISQLLEELKT 103
+ +R S+ R D L P LD++ + L + H Q + +K
Sbjct: 157 SYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYV-----LCKCKHVKCAQQFFDRVKH 211
Query: 104 RPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
+ + + +SI++ G ++ + A + F+EM G V A N+LL N
Sbjct: 212 KFEAKAK----TYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGN 267
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+E ++F E +G+EP++ +Y I+++CE+ + SV+S+L M+R + PN +
Sbjct: 268 VDEAYKMFREIGS-HGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYN 326
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
++ K K ED ++L M + G++ YN + C+ A L+ M+
Sbjct: 327 CIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKD 386
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC-QGGEYET 340
P+ +Y L+ + G + A +++ SM G P + + + LC + G+ E
Sbjct: 387 NCLPDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEE 446
Query: 341 ALKVCRASMAKGWVPHFSTMKSL 363
A + + +G P+ ST++ L
Sbjct: 447 ACRYFETMIDEGIPPYASTIEML 469
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 103/257 (40%), Gaps = 6/257 (2%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G S ++ + L+ S+ + + E + + E N E V +S+ + S
Sbjct: 107 GFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSD 166
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME--KCGIASGVNVYNIR 258
M +RP+ D LL Y K + V Q + K + Y+I
Sbjct: 167 AIRAFDRMAEFGLRPSVDDLDKLL---YVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSIL 223
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
++ + + EA+ + D M RG ++ Y L+ K GN++ A K+F + + G
Sbjct: 224 VRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGV 283
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
EPD+ + +F C+ + V VP+ T ++ L KV +A +
Sbjct: 284 EPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQ 343
Query: 379 LIGLMKKRFPKSGDMWN 395
L+ M +R S D W+
Sbjct: 344 LLHEMMER-GVSPDAWS 359
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 17/327 (5%)
Query: 65 ASLAPESPLDRMAFSIAV---SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL- 120
A +AP + +F+I + ++ +A+ ++++ + +PDL H I++
Sbjct: 148 AGIAPNT----FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDL------HTFLILVD 197
Query: 121 -YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL-SKNYEEVKRIFTEFPKVYGI 178
+A M + A + F EM G AL+ ++ +L +K +E + +F + K G
Sbjct: 198 CLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKC-GF 256
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P++ YN +I ++G + +L M K+ P +G+L+ K E +
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ ++M G +Y I K R +EA +L D M+ G +P++ T+ +I G
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K GN E A K F M GGC+P+ + L + G A ++ + +A G P
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436
Query: 359 TMKSLVTGLASISKVAEANELIGLMKK 385
T L+ G + ++ EA +L+ + K
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDK 463
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 142/349 (40%), Gaps = 40/349 (11%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + I V+ L +A +L + R N + I + ++ + A F+
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAA-SGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + G R V ++ G S N+E+ + F E + G +PN TY +I+ +
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR-GGCKPNVVTYTTIIQGLSKI 413
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++ + I+ M P++ + LL GF K + ++ ++L ++KC + + +Y
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 256 NIRIQSLC------------------------------------KLKRSEEAKALLDGML 279
+ + LC K R +EA + M+
Sbjct: 474 SSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 280 SRGIKPNLDTYKHLIHGF--GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
S G KP+ TY LI+G +E +E A L + G PD+ + LC+ GE
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGE 593
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A+K+ + ++GW +L TGL +V A L M ++
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 125/345 (36%), Gaps = 35/345 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D F I V L +A ++ E+ + + H + +A + A +
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV 247
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PK--VYGI------- 178
F +M+K G A N ++ G + + +E ++ P YGI
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307
Query: 179 -------------------EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
PNS Y +I F +SG S+ EM RP+
Sbjct: 308 AGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVIT 367
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+++ G K +E K + M + G V Y IQ L K+ R A ++ GM+
Sbjct: 368 HTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G P+ TY L+ GF K G L+ A +L + P+ + LC GG E
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE 487
Query: 340 TAL-KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
L + S A S++ GL ++ EA + M
Sbjct: 488 KTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 6/270 (2%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT---EFPK 174
IV + +D A + F+ M G + N L+ G S+ V+R F + K
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALLHDLEK 571
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V G P++ TY + C+ G+ +L E + + + L G + + +
Sbjct: 572 V-GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ Q M + G A Y I L K+K+ E+A D M+ +G KP + TY L+
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF-MFTYFLCQGGEYETALKVCRASMAKGW 353
GN++ A F SM G S + + C+ + + ALK+ +++G
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLM 383
VP T SL GL K +A EL+ M
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEM 780
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 7/263 (2%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSE 183
N ++ A +++K G L +G C + + VK + E G +
Sbjct: 557 NRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKML--EEASSRGWNADVV 614
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
Y + C G S+ EM R+ P+A + ++ G K K ED K M
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEM 674
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIHGFGKEGN 302
G V Y +Q+LC +EA + ML+RG + ++ Y LIHGF K
Sbjct: 675 IGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALK 734
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A KLF M + G P + L + G+ E A ++ + A G PH +T +
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTA 794
Query: 363 LVTGLASISKVAEANELIGLMKK 385
++ GL K E+ +L+ L+++
Sbjct: 795 ILDGL---RKSDESGKLLKLVQE 814
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G + + TYN ++ + S Y+I EM + I PN F +L+ F + + +D
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIH 295
++M++ ++ + I + LCK E+A + M++ G + P+ + ++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K ++ A+++F M G PD+ + L + G + ALKV +AK VP
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
T LV L + A EL +M
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVM 321
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E+ G V YN + L K + A+ + ML GI PN ++ LI F +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS- 362
+ A F M C+PD + F + LC+ G E A +V MA G+VP + +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 363 LVTGLASISKVAEANELIGLMKK-RFPKSGDMWNAAL 398
+V L +V EA E+ G M+K FP +N +
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMI 267
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 148/327 (45%), Gaps = 17/327 (5%)
Query: 65 ASLAPESPLDRMAFSIAV---SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL- 120
A +AP + +F+I + ++ +A+ ++++ + +PDL H I++
Sbjct: 148 AGIAPNT----FSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDL------HTFLILVD 197
Query: 121 -YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL-SKNYEEVKRIFTEFPKVYGI 178
+A M + A + F EM G AL+ ++ +L +K +E + +F + K G
Sbjct: 198 CLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKC-GF 256
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P++ YN +I ++G + +L M K+ P +G+L+ K E +
Sbjct: 257 PPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEE 316
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ ++M G +Y I K R +EA +L D M+ G +P++ T+ +I G
Sbjct: 317 LFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLC 376
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K GN E A K F M GGC+P+ + L + G A ++ + +A G P
Sbjct: 377 KSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSV 436
Query: 359 TMKSLVTGLASISKVAEANELIGLMKK 385
T L+ G + ++ EA +L+ + K
Sbjct: 437 TYICLLDGFCKLGRLDEAAQLLDELDK 463
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 143/349 (40%), Gaps = 40/349 (11%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + I V+ L +A +L + R N + I + ++ + A F+
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAA-SGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + G R V ++ G S N+E+ + F E + G +PN TY +I+ +
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR-GGCKPNVVTYTTIIQGLSKI 413
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC--------- 246
G ++ + I+ M P++ + LL GF K + ++ ++L ++KC
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 247 -----GIASGVNVYNIR----------------------IQSLCKLKRSEEAKALLDGML 279
G+ G +V N I LCK R +EA + M+
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 280 SRGIKPNLDTYKHLIHGF--GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
S G KP+ TY LI+G +E +E A L + G PD+ + LC+ GE
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A+K+ + ++GW +L TGL +V A L M ++
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 111/303 (36%), Gaps = 34/303 (11%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D F I V L +A ++ E+ + + H + +A + A +
Sbjct: 188 DLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREV 247
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PK--VYGI------- 178
F +M+K G A N ++ G + + +E ++ P YGI
Sbjct: 248 FGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCK 307
Query: 179 -------------------EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
PNS Y +I F +SG S+ EM RP+
Sbjct: 308 AGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVIT 367
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+++ G K +E K + M + G V Y IQ L K+ R A ++ GM+
Sbjct: 368 HTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMI 427
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G P+ TY L+ GF K G L+ A +L + P+ + LC GG E
Sbjct: 428 AHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVE 487
Query: 340 TAL 342
L
Sbjct: 488 NTL 490
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 7/263 (2%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSE 183
N ++ A +++ G L +G C + + VK + E G +
Sbjct: 557 NRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKML--EEASSRGWNADVV 614
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
Y + C G S+ EM R+ P+A + ++ G K K ED K M
Sbjct: 615 AYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEM 674
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIHGFGKEGN 302
G V Y +Q+LC +EA +GML+RG + ++ Y LIHGF K
Sbjct: 675 IGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALK 734
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A KLF M + G P + L + G+ E A ++ + A G PH +T +
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTA 794
Query: 363 LVTGLASISKVAEANELIGLMKK 385
++ GL K E+ +L+ L+++
Sbjct: 795 ILDGL---RKSDESGKLLKLVQE 814
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 4/266 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP--KV 175
IV + +D A + F+ M G + N L+ G S+ V+R F ++
Sbjct: 513 IVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALLHDLEM 571
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G P++ TY + C+ G+ +L E + + + L G + + +
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ Q M + G A Y I L K K+ E+A D M+ +G KP + TY L+
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQ 691
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFF-MFTYFLCQGGEYETALKVCRASMAKGWV 354
GN++ A F M G S + + C+ + + ALK+ +++G V
Sbjct: 692 ALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV 751
Query: 355 PHFSTMKSLVTGLASISKVAEANELI 380
P T SL GL K +A EL+
Sbjct: 752 PTAVTSASLFDGLVRSGKTEKAQELL 777
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 2/252 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A Q +E+DK ++ ++L+ G + E E K +
Sbjct: 451 LDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC 510
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF--YKEHKYEDVGKVLQMME 244
+I C++G I M + +P+AT + +L+ G +E++ E +L +E
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G Y LCK+ + A +L+ SRG ++ Y L G +G ++
Sbjct: 571 MVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVD 630
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A LF M G PD+ + L +G + E A K + KG P +T +LV
Sbjct: 631 RAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALV 690
Query: 365 TGLASISKVAEA 376
L V EA
Sbjct: 691 QALCHAGNVDEA 702
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 1/208 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G + + TYN ++ + S Y+I EM + I PN F +L+ F + + +D
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIH 295
++M++ ++ + I + LCK E+A + M++ G + P+ + ++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K ++ A+++F M G PD+ + L + G + ALKV +AK VP
Sbjct: 234 TLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVP 293
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
T LV L + A EL +M
Sbjct: 294 TEVTYGILVNSLCKAGTLERAEELFRVM 321
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 2/157 (1%)
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E+ G V YN + L K + A+ + ML GI PN ++ LI F +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS- 362
+ A F M C+PD + F + LC+ G E A +V MA G+VP + +
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 363 LVTGLASISKVAEANELIGLMKK-RFPKSGDMWNAAL 398
+V L +V EA E+ G M+K FP +N +
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMI 267
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 139/312 (44%), Gaps = 3/312 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D ++SI + +LL + D ++ V+ G +A M+D A
Sbjct: 163 DVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAK 222
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F+ M G+R + L+ G + ++EV ++ E +G++P+ Y ++
Sbjct: 223 GVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEM-STHGLQPDCYIYAVLLDY 281
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++G + +I + RK I+PN T +G+LL G+ E ++ L +M G++
Sbjct: 282 LCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPD 341
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+++NI + K +EA + D M + + PN+ TY LI K G ++ A F
Sbjct: 342 HHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFN 401
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G PD + F Y LC ++E A ++ + +G +L+ L
Sbjct: 402 QMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREG 461
Query: 372 KVAEANELIGLM 383
+V EA LI LM
Sbjct: 462 RVMEAQRLIDLM 473
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 123/312 (39%), Gaps = 45/312 (14%)
Query: 113 FHVHSIVLYGQ-------ANMIDHAMQTF-EEMDKYGLRQSVDALNALLLGCILSKNYEE 164
+ V+ V++ Q A +D A M ++G V + + LL G K EE
Sbjct: 123 WRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEE 182
Query: 165 VKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+ + PN TY VI C++ + M K +RPN +
Sbjct: 183 ALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTC 242
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G+ K+++V ++LQ M G+ +Y + + LCK R EA+ + D ++ +G
Sbjct: 243 LIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKG 302
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-FMFTYF---------- 331
IKPN+ Y L+HG+ EG+L M G PD + F MF +
Sbjct: 303 IKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAM 362
Query: 332 ------------------------LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LC+ G + A+ + +G P SLV GL
Sbjct: 363 HIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGL 422
Query: 368 ASISKVAEANEL 379
++ K +A EL
Sbjct: 423 CTVDKWEKAEEL 434
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 45/302 (14%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-----GIEPN 181
++ A++ F+EM + SV A N LL ++ + + + F ++ + P+
Sbjct: 32 LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91
Query: 182 SETYNKVIKSFCESG-------------------DSSSVYS------------------I 204
S TY +I FC G + + ++S +
Sbjct: 92 SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS---GVNVYNIRIQS 261
L M P+ + +LL GF E + E+ ++L MM G S V Y I
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCK + + AK + M+ +G++PN TY LIHG+ G + ++ M+ G +PD
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
Y + + +LC+ G A + + + KG P+ + L+ G A+ ++E + +
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331
Query: 382 LM 383
LM
Sbjct: 332 LM 333
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 134/301 (44%), Gaps = 22/301 (7%)
Query: 51 SESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN 110
SE + F LD+ G ++P+ + + F A +K + + I + + + P+
Sbjct: 324 SEMHSF--LDLMVGNGVSPDHHIFNIMFC-AYAKKAMIDEAMHIFDKMRQQRLSPN---- 376
Query: 111 ERFHVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
IV YG + +D A+ F +M G+ + ++L+ G +E
Sbjct: 377 -------IVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWE 429
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+ + +F E GI ++ +N ++ + C G ++ M R +RP+ + L
Sbjct: 430 KAEELFFEVLD-QGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTL 488
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G + ++ K+L ++ G+ YN + CK +R ++A +L ML +G+
Sbjct: 489 VDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P++ TY ++HG + G AK+L+ SM N + + Y + + LC+ + A K
Sbjct: 549 TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFK 608
Query: 344 V 344
+
Sbjct: 609 M 609
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 115/258 (44%), Gaps = 11/258 (4%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M + G+R V + N L+ G L+ +E ++ + G++P+ TYN ++
Sbjct: 466 AQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSI-GLKPDKVTYNTLL 524
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C++ YS+ EM K + P+ + +L G ++ ++ + ++ M
Sbjct: 525 HGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQ 584
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YNI I LCK +EA + + S+ ++ ++ T +I K G E A L
Sbjct: 585 MNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDL 644
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL-- 367
FA+++ G PD + + L + G E ++ A G P+ + +LV L
Sbjct: 645 FATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLH 704
Query: 368 --------ASISKVAEAN 377
A +SK+ E N
Sbjct: 705 RGDINRAGAYLSKLDEKN 722
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 128/293 (43%), Gaps = 10/293 (3%)
Query: 95 SQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
+Q+++E T PD+ V S ++YG + + A + F E+ G+R N L
Sbjct: 401 NQMIDEGMT-PDI------FVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTL 453
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ E +R+ +V G+ P+ +YN ++ C +G +L +
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRV-GVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIG 512
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
++P+ + LL G+ K + +D + + M G+ V YN + L + R EAK
Sbjct: 513 LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 572
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L M++ + N+ TY +I+G K ++ A K+F S+ + + D + + L
Sbjct: 573 ELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGAL 632
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+GG E A+ + A G VP T + L + E +EL M++
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEE 685
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M++ A Q F +M+K+ + V + N LL S F + V G+ P+ TY
Sbjct: 196 MLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDM-VVAGLSPSVFTY 254
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI GD + S+ EM+ K +RP+ + L+ G+ K V + M+
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V YN I CK +R +A L GM RG++PN+ TY LI F K G L
Sbjct: 315 AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLE 374
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A K F M G +P+ + + C+ G+ A K+ G + T +L+
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLD 434
Query: 366 GLASISKVAEANELIGLMKK 385
GL ++ EA EL G + K
Sbjct: 435 GLCEDGRMREAEELFGALLK 454
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 135/325 (41%), Gaps = 16/325 (4%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLY 121
A L+P +++ + L++ A L EE+K RPD+ I Y
Sbjct: 245 AGLSPSV----FTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSL----IDGY 296
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP--KVYGIE 179
G+ M+ A+ FEEM G V N+L+ C +E + + F K G++
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLI-NCFC--KFERIPQAFEYLHGMKQRGLQ 353
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY+ +I +FC++G +M R ++PN + L+ K + K+
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M++ G+ + Y + LC+ R EA+ L +L G N Y L HG+ K
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+E A + M +PD + + LC+ E E ++ V R M G +
Sbjct: 474 AKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYI 533
Query: 360 MKSLVTGLASISKVAEANELIGLMK 384
+L+ + K EA L+ M+
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLLQEMQ 558
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 1/284 (0%)
Query: 110 NERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
N++ + Y +A M++ AM EEM+K L+ + + G E+ +
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVI 519
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E G+ NS Y +I ++ + G ++ ++L EM+ I+ +G+L+ G K
Sbjct: 520 REMMDC-GLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCK 578
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ + M + G+ + +Y I LCK EEAK L + ML +GI P+
Sbjct: 579 IGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLV 638
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y LI G K GN A L M G E D + + + G+ + A + +
Sbjct: 639 YTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEML 698
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
KG +P L+ + + EA L M +R SG +
Sbjct: 699 RKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTI 742
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 1/263 (0%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
R L+ NE + I + ++ A + EM + G+ ++ ALL G
Sbjct: 384 RVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMR 443
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E + +F K G N + Y + + ++ IL EM +K+++P+ +G
Sbjct: 444 EAEELFGALLKA-GWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTK 502
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G ++++ ED V++ M CG+ + +Y I + K+ ++ EA LL M GI
Sbjct: 503 IWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI 562
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
K + TY LI G K G ++ A + F MT G +P+ + LC+ E A
Sbjct: 563 KITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKN 622
Query: 344 VCRASMAKGWVPHFSTMKSLVTG 366
+ + KG P SL+ G
Sbjct: 623 LFNEMLDKGISPDKLVYTSLIDG 645
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 66/177 (37%)
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R RP F L E+ + M K + V N + L K +
Sbjct: 174 RNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGG 233
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
A + M+ G+ P++ TY +I +EG+LE A+ LF M G PD +
Sbjct: 234 LALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLI 293
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G A+ V G P T SL+ ++ +A E + MK+R
Sbjct: 294 DGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQR 350
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 147/335 (43%), Gaps = 38/335 (11%)
Query: 82 VSKLSQANHFNAISQLLEEL-KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM-DK 139
+ KLS+A F+ + LL +L + ++ + + I YG A A++TF + ++
Sbjct: 56 IDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEE 115
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES---- 195
+ ++ SV LN LL + +K Y V YG+ PN ++N +IK+ C+
Sbjct: 116 FSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVE 175
Query: 196 -------------------------------GDSSSVYSILAEMRRKSIRPNATDFGLLL 224
GD + + +E+ K P+AT + +L+
Sbjct: 176 NALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLM 235
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G+ K+ + D KV+ ME G+ Y + I + CK K+S EA+ L+D ML +
Sbjct: 236 VGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFL 295
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ +I ++G +E A L+ M C PD+ ++LC+ G+ A K+
Sbjct: 296 PSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKL 355
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+G +P T +L+ G+ ++ EA L
Sbjct: 356 -FDEFEQGTIPSLMTYNTLIAGMCERGELNEAGRL 389
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 7/271 (2%)
Query: 127 IDHAMQTFEEMDKY--GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-IEPNSE 183
+D A Q F+ KY G + D ++++ ++ ++ V+ + ++ + I+ +
Sbjct: 28 LDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDD 87
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGKVLQ- 241
+ VI+++ +G ++ + S++P+ LL F + +Y VG L+
Sbjct: 88 VFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKN 147
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+K G+ V +NI I++LCK E A + D M + G+ PNL TY ++ GF G
Sbjct: 148 CKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRG 207
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+L A+K+F+ +++ G PD+ + + C+ G A+KV G P+ T
Sbjct: 208 DLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYG 267
Query: 362 SLVTGLASISKVAEANELIGLM--KKRFPKS 390
++ K EA LI M KK P S
Sbjct: 268 VMIDAYCKEKKSGEARNLIDDMLDKKFLPSS 298
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 39/312 (12%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ N +++A++ F+EM G+ ++ +L G + + +++F+E G P++
Sbjct: 170 KKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISD-KGWLPDA 228
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK-------YED 235
TY ++ +C+ G S ++ M + PN +G+++ + KE K +D
Sbjct: 229 TTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDD 288
Query: 236 V----------------------GKV-------LQMMEKCGIASGVNVYNIRIQSLCKLK 266
+ GKV +M+EK + + + I LCK
Sbjct: 289 MLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNA-IMSTLIHWLCKEG 347
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ EA+ L D +G P+L TY LI G + G L A +L+ M C P+++ +
Sbjct: 348 KVWEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYN 406
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
M + G + +++ + G +P+ ST L+ GL + ++++ +
Sbjct: 407 MLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSMAMAS 466
Query: 387 FPKSGDMWNAAL 398
D W+ L
Sbjct: 467 REVDADSWDLFL 478
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN+ TY VI +FC+ G S+L EM++KSI P+ + L+ K ++E+V
Sbjct: 210 KPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M I V +N I LCK + E+A+ ++ M+ +G+ P++ TY +I G+G
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
G ++ A+++F SM N EPD + + + + + A++VCR KG P
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389
Query: 359 TMKSLVTGLASISKVAEANELIGLM 383
T L+ GL + + A M
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEM 414
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 98/199 (49%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I P+ TY+ +I + C+ +V ++ EM +I PN F ++ G KE K ED
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++++ M + G+ V YN+ I + + A+ + D M+++ I+P++ +Y LI+G+
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGY 363
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++ ++ A ++ ++ G +P + + L + G ++A ++ G +P
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423
Query: 358 STMKSLVTGLASISKVAEA 376
T +L+ G V EA
Sbjct: 424 YTHCTLLGGYFKNGLVEEA 442
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 1/202 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG +D A + F+ M + + + N L+ G K +E ++ E + G++P
Sbjct: 328 YGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQ-KGLKP 386
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ T N ++ E G + S + EM P+ LL G++K E+
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+E+ + + +Y I LCK + ++A A + + G+ P++ TY +I G+ +E
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 301 GNLEGAKKLFASMTNGGCEPDS 322
G L+ AK + M + GC D+
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADN 528
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 35/292 (11%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY---------- 176
+D A F +M + SV + + LL + K+Y V +F E K+
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112
Query: 177 ------------------------GIEPNSETYNKVIKS-FCESGDSSSVYSILAEMRRK 211
GI N T+ +I+ F E+ +V+ +R
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVREN 172
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
PN +G ++ G K+ + +L++ME+ Y I I + CK + A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGA 232
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+LL+ M + I P++ TY LI K E + LF M + P+ F
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC+ G+ E A ++ R + KG P T ++ G +V A E+ M
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 131/340 (38%), Gaps = 49/340 (14%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQT 133
++I + + + + LL E+K + PD+ I + + ++
Sbjct: 215 TYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTL----IDALCKLSQWENVRTL 270
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSK--NYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F EM + +V N+++ G C K + EE+ R E G++P+ TYN +I
Sbjct: 271 FLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE----KGVDPDVITYNMIID 326
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ G I M KSI P+ + +L+ G+ ++ K ++ +V + + + G+
Sbjct: 327 GYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKP 386
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT--------------------- 289
+ N+ + L +L R++ A+ D MLS G P+L T
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446
Query: 290 --------------YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
Y +I G K G L+ A F + G PD + CQ
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G + A + R G + T +V G +KV+E
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 1/186 (0%)
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+S+ +M R P+ F LL Y V + + + K I + +I + S
Sbjct: 57 FSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNS 116
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG-CEP 320
C + R++ ++L +GI N T+ LI G E ++ A LF + CEP
Sbjct: 117 CCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEP 176
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + LC+ G + A + R P+ T ++ + A L+
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLL 236
Query: 381 GLMKKR 386
MK++
Sbjct: 237 NEMKQK 242
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/139 (18%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 105 PDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
PDL + H +L Y + +++ AM F ++++ ++ A++ G +
Sbjct: 421 PDL------YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
++ F + P + G+ P+ TY +I +C+ G +L +M + + +
Sbjct: 475 DKAHATFEKLPLI-GLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533
Query: 223 LLAGFYKEHKYEDVGKVLQ 241
++ GF + +K ++ L+
Sbjct: 534 IVRGFLRSNKVSEMKAFLE 552
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 129/268 (48%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A+ +EM+ G++ + + L+ G I ++ RIF E K G
Sbjct: 459 INLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKS-G 517
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I++FC+ G+ IL +M+++ ++P+ F ++ GF +
Sbjct: 518 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRAL 577
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L +M + G A V YN I L + + E A ++L+ M GI PN TY ++ G+
Sbjct: 578 DILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGY 637
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G++ A + F + GG + D Y + C+ G ++AL V R ++ +
Sbjct: 638 AATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNT 697
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A V EA +L+ MK+
Sbjct: 698 FVYNILIDGWARRGDVWEAADLMKQMKE 725
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 145/311 (46%), Gaps = 4/311 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
+ +SI +S + N + L +E KT DL N + + I + Q+ +D A +
Sbjct: 348 VTYSILISGFGKINDTQSADNLFKEAKTNLGDL--NGIIYSNIIHAHCQSGNMDRAEELV 405
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM++ G+ +DA ++++ G + ++ ++ +F K P+ +Y +I + +
Sbjct: 406 HEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERL-KECCFTPSIISYGCLINLYVK 464
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G + +I EM I+ N + +L++GF H + + ++ + M K G+ +
Sbjct: 465 IGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAI 524
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN+ I++ CK+ + A +L+ M ++P+ ++ +I GF G+++ A + M
Sbjct: 525 YNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMR 584
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC P + + L + + E A+ V G P+ T ++ G A+ +A
Sbjct: 585 RSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIA 644
Query: 375 EANELIGLMKK 385
+A E +K+
Sbjct: 645 KAFEYFTKIKE 655
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 135/335 (40%), Gaps = 47/335 (14%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N FRI + + L P DR +++ + + + + ++LE+++ + ++ + R
Sbjct: 504 TNAFRIFEEMLKSGLQP----DRAIYNLLIEAFCKMGNMDRAIRILEKMQ-KERMQPSNR 558
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I + A + A+ + M + G +V NAL+ G I E + +
Sbjct: 559 AFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKM 618
Query: 173 PKVYGIEPNSETYNKVIKSF-----------------------------------CESGD 197
+ GI PN TY +++ + C+SG
Sbjct: 619 -SIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGR 677
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
S ++ EM + I N + +L+ G+ + + +++ M++ G+ ++ Y
Sbjct: 678 MQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTS 737
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I + CK + A+ ++D M G+KPNL TY LI G+ + + A K F M G
Sbjct: 738 YINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAG 797
Query: 318 CEPDSYCFFMFTYFLC------QGGEYETALKVCR 346
+PD + L +G Y L VCR
Sbjct: 798 LKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCR 832
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 2/294 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+S+ +S + F ++ EE+ + L+ + + I + + +D A++ E+M
Sbjct: 490 YSMLISGFIHLHDFTNAFRIFEEM-LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKM 548
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K ++ S A ++ G ++ + + I + + G P TYN +I
Sbjct: 549 QKERMQPSNRAFRPIIEGFAVAGDMKRALDIL-DLMRRSGCAPTVMTYNALIHGLIRKNQ 607
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
S+L +M I PN + +++ G+ + +++ G+ V +Y
Sbjct: 608 VERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYET 667
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+++ CK R + A A+ M S+ I N Y LI G+ + G++ A L M G
Sbjct: 668 LLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDG 727
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
P+ + + + C+ G+ + A V G P+ T +L+ G A S
Sbjct: 728 VPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARAS 781
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 112/303 (36%), Gaps = 36/303 (11%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV Y + HA TFE M G+ + +L+ ++++ TE K G
Sbjct: 284 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC-TEEMKAEG 342
Query: 178 IEPNSETYNKVIKSF-----------------------------------CESGDSSSVY 202
IE TY+ +I F C+SG+
Sbjct: 343 IELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAE 402
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
++ EM I + ++ G+ + V + +++C + Y I
Sbjct: 403 ELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLY 462
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K+ + +A A+ M S GIK N TY LI GF + A ++F M G +PD
Sbjct: 463 VKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDR 522
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+ G + A+++ + P + ++ G A + A +++ L
Sbjct: 523 AIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDL 582
Query: 383 MKK 385
M++
Sbjct: 583 MRR 585
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 19/224 (8%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
++++ V F PK P+ + +I + + GD + MR + I PNA
Sbjct: 260 EDWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFV 314
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F L+ + + M+ GI + Y+I I K+ ++ A L
Sbjct: 315 FTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAK 374
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQGGE 337
+ N Y ++IH + GN++ A++L M G + D+Y M Y + Q +
Sbjct: 375 TNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEK 434
Query: 338 -----YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+E + C + P + L+ I KVA+A
Sbjct: 435 KCLIVFERLKECC-------FTPSIISYGCLINLYVKIGKVAKA 471
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 156/340 (45%), Gaps = 4/340 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
LKSE NP + A+ P + + + +LS+A + +++E ++++ + +
Sbjct: 17 LKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQ-ECK 75
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKR 167
+E + I YG+ +M D A+ F+ M + +G + + N LL + +K + +V+
Sbjct: 76 CDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVES 135
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F F + G+ PN +TYN +IK C+ + L M ++ +P+ + ++
Sbjct: 136 LFAYF-ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDL 194
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPN 286
K K +D ++ M + +A V YNI I K K + A L D +L + PN
Sbjct: 195 AKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPN 254
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ T+ +I G K G ++ K++ M E D Y + + LC G + A V
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFN 314
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + T +++ G K+ E+ EL +M++R
Sbjct: 315 ELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQR 354
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 10/259 (3%)
Query: 120 LYGQANMID---------HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+Y A++ID A +EM K+G+ + NAL+ G I + +
Sbjct: 429 VYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMR 488
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
K G P +YN +I CE+G + + EM ++P+ + +LL G ++
Sbjct: 489 GMGK-NGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRD 547
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K E ++ + G+ V ++NI I LC + + ++A ++ M R NL TY
Sbjct: 548 RKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
L+ G+ K + A ++ M G +PD + LC A++ +
Sbjct: 608 NTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARN 667
Query: 351 KGWVPHFSTMKSLVTGLAS 369
G P T LV + +
Sbjct: 668 HGIFPTVYTWNILVRAVVN 686
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +I C+ +++ EM + + N+ L+ G ++ + D +++ M
Sbjct: 432 YASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMG 491
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
K G V YNI I LC+ + EA A + ML G+KP+L TY L+ G ++ +E
Sbjct: 492 KNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIE 551
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +L+ G EPD + + LC G+ + A+ V + + T +L+
Sbjct: 552 LALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLM 611
Query: 365 TGLASISKVAEANELIGLMKK 385
G + A + G M K
Sbjct: 612 EGYFKVRDSNRATVIWGYMYK 632
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 105/246 (42%), Gaps = 3/246 (1%)
Query: 143 RQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
R SV+ + N L+ G + + +E I+ P G ++ TY I C +G +
Sbjct: 354 RNSVNIVSYNILIKGLLENGKIDEATMIWRLMP-AKGYAADNTTYGIFIHGLCVNGYVNK 412
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ E+ K + + ++ K+ + E+ +++ M K G+ +V N I
Sbjct: 413 ALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIG 472
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L + R +A L+ GM G P + +Y LI G + G A M G +P
Sbjct: 473 GLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKP 532
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D + + LC+ + E AL++ + G P L+ GL S+ K+ +A ++
Sbjct: 533 DLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVM 592
Query: 381 GLMKKR 386
M+ R
Sbjct: 593 ANMEHR 598
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A++ F+EM + + V N L+ G + K+++ +++ + + + PN +T+N
Sbjct: 200 LDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHN 259
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + G I M++ + + L+ G E + V + +
Sbjct: 260 IMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVER 319
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN + C+ + +E+ L M R N+ +Y LI G + G ++ A
Sbjct: 320 KAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEA 378
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M G D+ + +F + LC G AL V + +KG S++
Sbjct: 379 TMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDC 438
Query: 367 LASISKVAEANELIGLMKK 385
L ++ EA+ L+ M K
Sbjct: 439 LCKKRRLEEASNLVKEMSK 457
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
++++I + L +A F S ++E+ +PDL+ +SI+L G + I+ A
Sbjct: 500 VSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLK------TYSILLGGLCRDRKIELA 553
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ + + + GL V N L+ G ++ + N TYN +++
Sbjct: 554 LELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEH-RNCTANLVTYNTLME 612
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ + DS+ I M + ++P+ + +L G H+ + GI
Sbjct: 613 GYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFP 672
Query: 251 GVNVYNIRIQSLCKLK 266
V +NI ++++ K
Sbjct: 673 TVYTWNILVRAVVNRK 688
>gi|357488555|ref|XP_003614565.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515900|gb|AES97523.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 140
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 78/108 (72%), Gaps = 2/108 (1%)
Query: 36 LTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAIS 95
LT KEK R+T+ L SE+NP IL IC ASL+P+S LDR+A S AVSKL+ +F+ +
Sbjct: 20 LTSKEKSRSTLRLLNSETNPETILSICRAASLSPDSHLDRLALSTAVSKLTAGKNFDILR 79
Query: 96 QLLEE-LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGL 142
Q L+E L++R DL QNERF H+IVLYGQANM++ A+ TF+ M + G
Sbjct: 80 QFLDEFLQSRSDL-QNERFVSHTIVLYGQANMMNQALDTFKFMREKGF 126
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ + ++M + GL + N L+ GC EE ++ E + +P++ TYN
Sbjct: 517 MEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQ-QEFQPDTYTYN 575
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++K + G V+ +L E + PN + LLL G+ K + ED K + ++
Sbjct: 576 FLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYE 635
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ VYNI I + C++ EA L D M SRGI P TY LIHG G ++ A
Sbjct: 636 KVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEA 695
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K++F M N G P+ +C+ C+ G+ + + + G P+ T ++ G
Sbjct: 696 KEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDG 755
Query: 367 LASISKVAEANELIGLM 383
+ + EA EL+ M
Sbjct: 756 YCKLGNMKEARELLNEM 772
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ ++ +R S L L++G + + E ++ + V G+ N+ T N ++
Sbjct: 449 ALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALL 508
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
CE G+ V+ +L +M K + + + L+ G K K E+ K+ + M +
Sbjct: 509 HGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQ 568
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN ++ L + + ++ LL G PN+ TY L+ G+ K +E A K
Sbjct: 569 PDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKF 628
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F ++ E S + + C+ G A K+ A ++G +P +T SL+ G+
Sbjct: 629 FKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCC 688
Query: 370 ISKVAEANELIGLMK 384
I +V EA E+ M+
Sbjct: 689 IGRVDEAKEIFEEMR 703
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 16/278 (5%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANM--I 127
LDR++++ + + +L EE+ + +PD + ++ ++ G A+M I
Sbjct: 534 LDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDT------YTYNFLMKGLADMGKI 587
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT--EFPKVYGIEPNSETY 185
D + E +YG +V LL G + E+ + F ++ KV E +S Y
Sbjct: 588 DDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKV---ELSSVVY 644
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I ++C G+ + + + M+ + I P + L+ G + ++ ++ + M
Sbjct: 645 NILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRN 704
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ V Y I CKL + + ++L M S GI+PN TY +I G+ K GN++
Sbjct: 705 EGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKE 764
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
A++L M G PD+ + C+ E L+
Sbjct: 765 ARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ 802
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TYN VI +SG M R + P+ +G+L++G K +E+
Sbjct: 285 GVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEA 344
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL M G A V+N I C+ EA + D M +G+KPN T+ L+ G
Sbjct: 345 NEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQG 404
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPD-SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F + +E A+++ + + G + C ++ + + G + +ALK+ ++
Sbjct: 405 FCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSG-FVSALKIVTKLLSGNIRV 463
Query: 356 HFSTMKSLVTGLASISKVAEANEL 379
S + LV GL +EA EL
Sbjct: 464 SDSLLTPLVVGLCKCEGHSEAIEL 487
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 2/223 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F K G+ + N LL + + + +F G+ P+ T+ I
Sbjct: 205 AFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD--LACQGVAPDVFTFTTAI 262
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC+ G + +M + PN + ++ G +K ++E+ + M + +
Sbjct: 263 NAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVN 322
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y + I L KL+ EEA +L M S G PN + LI G+ ++G++ A ++
Sbjct: 323 PSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRV 382
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
M G +P+ F C+ + E A +V ++ G
Sbjct: 383 RDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG 425
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 4/214 (1%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
IF F K G+ P +T N ++ S ++ + Y + ++ + + P+ F + F
Sbjct: 208 IFVMFSK-RGVFPCLKTCNLLLSSLVKANELHKSYEVF-DLACQGVAPDVFTFTTAINAF 265
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K + D + ME G+ V YN I L K R EEA D M+ + P++
Sbjct: 266 CKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSV 325
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LI G K E A ++ M + G P+ F C+ G+ AL+V R
Sbjct: 326 VTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRV-RD 384
Query: 348 SMA-KGWVPHFSTMKSLVTGLASISKVAEANELI 380
MA KG P+F T +L+ G +++ +A +++
Sbjct: 385 EMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVL 418
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 143/312 (45%), Gaps = 4/312 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD ++ + + + +A + + + + LR NE + + I + +A +D A++
Sbjct: 237 LDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLR-NEVSYTNLIHGFCEARRVDEALK 295
Query: 133 TFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F +M + +V ++ C L + E + +F E + + +PN TY +I S
Sbjct: 296 LFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALN-MFKEMTEKH-CQPNVHTYTVLICS 353
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
CE + IL M K + P+ + L+ G+ K+ ++L +ME +
Sbjct: 354 LCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPN 413
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
YN I C+ K +A +LL ML R ++PN+ TY LIHG KEG+L A KL +
Sbjct: 414 ARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLS 473
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M G PD + + +F LC+ G E A + + KG + +L+ G +
Sbjct: 474 LMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVG 533
Query: 372 KVAEANELIGLM 383
KV++ L+ M
Sbjct: 534 KVSDGRFLLDKM 545
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 7/259 (2%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCI---LSKNYEEVKRIFTEFPKVYGIEPNSET 184
D A + M + GL SV NAL+ G LS + E+ + + PN+ T
Sbjct: 361 DDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM----ESNNCSPNART 416
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN++I FC + S+L +M + ++PN + +L+ G KE K+L +M
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMN 476
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G+ Y++ I +LCK EEA++L + + +GIK N Y LI G+ K G +
Sbjct: 477 ESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVS 536
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+ L M + GC P+S + C+ ++ A + + + P T L+
Sbjct: 537 DGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILI 596
Query: 365 TGLASISKVAEANELIGLM 383
L + +A+++ M
Sbjct: 597 DNLLKDDEFDQAHDMFDQM 615
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 4/290 (1%)
Query: 111 ERFHVHSIVL-YGQANMIDHAMQTFEEMDKYG-LRQSVDALNALLLGCILSKNYEEVKRI 168
+ F S++L Y + +D A F M G LR V N L+ G ++ +E ++
Sbjct: 238 DTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTN-LIHGFCEARRVDEALKL 296
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
F++ + P TY +I + C+ G + ++ EM K +PN + +L+
Sbjct: 297 FSQMHED-NCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLC 355
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
++ ++D K+L M + G+ V YN I CK S A +L M S PN
Sbjct: 356 EDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNAR 415
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY LI GF + N+ A L M +P+ + + + C+ G+ +A K+
Sbjct: 416 TYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLM 475
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
G VP T + L V EA L +K++ K+ ++ + L
Sbjct: 476 NESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 7/263 (2%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
I L+E P N R + I+ + + I AM +M + L+ +V N L+
Sbjct: 401 ILSLMESNNCSP----NARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G + ++ + + G+ P+ TY+ I + C+ G S+ ++ K I
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNES-GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+ N + L+ G+ K K D +L M G YN I CK K +EA+
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L+D M+ R I+P DTY LI K+ + A +F M + G PD + + F + C
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYC 635
Query: 334 QGGEYETA-LKVCRASMAKGWVP 355
G + A + +C+ + AKG +P
Sbjct: 636 SHGRLKDAEVLICKMN-AKGIMP 657
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ M+ + N L+LG KN + + + + ++PN TYN +I
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLE-RKLQPNVVTYNILI 456
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ GD S Y +L+ M + P+ + + + K E+ + + +++ GI
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIK 516
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y+ I CK+ + + + LLD MLS G PN TY LI G+ KE N + A+ L
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M EP + + + L + E++ A + ++ G P + + S
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636
Query: 370 ISKVAEANELIGLMKKR 386
++ +A LI M +
Sbjct: 637 HGRLKDAEVLICKMNAK 653
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE + +F E K GI+ N Y+ +I +C+ G S +L +M PN+ +
Sbjct: 501 EEARSLF-ESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G+ KE +++ ++ +M K I + Y I I +L K ++A + D MLS G
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
P++ Y IH + G L+ A+ L M G PD+ + +F + G + A
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ + G P + T L+ L++
Sbjct: 680 GILKRMHEVGCEPSYYTYSCLIKHLSN 706
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 33/304 (10%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+++ A FE + + G++ + + L+ G C + K + R + G PNS T
Sbjct: 499 LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSD--GRFLLDKMLSAGCVPNSIT 556
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I +C+ + ++ M ++ I P A + +L+ K+ +++ + M
Sbjct: 557 YNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQML 616
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G V +Y I + C R ++A+ L+ M ++GI P+ Y I +G+ G+++
Sbjct: 617 STGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSID 676
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG---------------------------- 336
GA + M GCEP Y + L
Sbjct: 677 GAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRR 736
Query: 337 -EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG-DMW 394
+YE L + G P+ +T +TGL + + A+ L MK++ D++
Sbjct: 737 VDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIY 796
Query: 395 NAAL 398
N+ L
Sbjct: 797 NSLL 800
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 113/269 (42%), Gaps = 1/269 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
++L + MID + EM + ++ LN ++ G N E + ++ + G
Sbjct: 176 LMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQA-G 234
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ ++ TY +I +C + + + +I M K N + L+ GF + + ++
Sbjct: 235 LSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEAL 294
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+ M + V Y + I +LC+L R EA + M + +PN+ TY LI
Sbjct: 295 KLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSL 354
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++ N + AKK+ M G P + C+ G +AL++ + P+
Sbjct: 355 CEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNA 414
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ G + +A L+ M +R
Sbjct: 415 RTYNELILGFCRGKNIHKAMSLLHKMLER 443
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 129/349 (36%), Gaps = 33/349 (9%)
Query: 66 SLAPESPL--DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
SL ES L D +S+ + L + L E LK + ++ NE + I Y +
Sbjct: 473 SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK-GIKANEVIYSTLIDGYCK 531
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+ ++M G + N+L+ G KN++E R+ + IEP ++
Sbjct: 532 VGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA-RLLVDIMIKRDIEPAAD 590
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I + + + + + +M P+ + + + + +D ++ M
Sbjct: 591 TYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKM 650
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY----KHLIHGFGK 299
GI +Y + I + + + A +L M G +P+ TY KHL + K
Sbjct: 651 NAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPK 710
Query: 300 EG-------------------------NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
E + E LF M GC P++ + F LC+
Sbjct: 711 EVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCK 770
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G E A ++ KG P+ SL+ + EA + +M
Sbjct: 771 VGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIM 819
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 11/194 (5%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG+ ID A + M + G S + L+ +K +EV G+
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKP-KEVSSSSELSDLSSGVAS 727
Query: 181 N--SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
N S + +V D + +M PNA +G + G K E +
Sbjct: 728 NDFSNCWRRV--------DYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHR 779
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M++ G + ++YN + C+L EA LD M+ P+LD+ K L+ G
Sbjct: 780 LFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLY 839
Query: 299 KEGNLEGAKKLFAS 312
EGN E AK++F S
Sbjct: 840 DEGNDEKAKRVFCS 853
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 59/131 (45%)
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN+ + L + +E K++ ML + PN+ T +++G+ K GN+ A+ + +
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G D++ + C+ + A + + KG + + + +L+ G +V
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291
Query: 375 EANELIGLMKK 385
EA +L M +
Sbjct: 292 EALKLFSQMHE 302
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 134/279 (48%), Gaps = 1/279 (0%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
++++V + ++ I + F + K G++ + ++ N L+ G + + E R+ + +
Sbjct: 166 LNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKM-R 224
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
YG P++ TYN ++ C+ G + +L +M+ K + PN T F +L+ G + +
Sbjct: 225 DYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLK 284
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ V+++M + + YN+ I CK R EA L + M + + P++ TY LI
Sbjct: 285 EAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLI 344
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+G + G+ E KL M G +P+S + + + + G+ + K R G +
Sbjct: 345 NGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCL 404
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
P T +L++ + K+ EA L+ M ++ K D+
Sbjct: 405 PDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDV 443
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 136/292 (46%), Gaps = 4/292 (1%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL-L 154
+L+EE++ R ++ N + + + + +D +T +M++ G + N L+
Sbjct: 358 KLIEEMEGR-GMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISW 416
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
C + K +E R+ E + G++ + T N ++++ C + +L RR+
Sbjct: 417 HCKVGK-MDEAFRLMDEMGR-KGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYF 474
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
+ +G L+ G++K K ++ M++ I + YN I LC++ ++ +A
Sbjct: 475 VDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDK 534
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
LD +L G+ P+ TY +IHG+ +EG +E A + M +PD LC+
Sbjct: 535 LDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCK 594
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G E ALK+ ++KG + +++ L + EA +L+ M+++
Sbjct: 595 EGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEK 646
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 6/307 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D + ++ + L + N LL ++K + F++ +V + + A
Sbjct: 229 PPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNI-LVVGCCRLGWLKEAA 287
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
E M + + N ++ G E R+ E + + P+ TYN +I
Sbjct: 288 NVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENL-KLSPDVVTYNTLING 346
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
E G S + ++ EM + ++PN+ + +++ F K+ K ++V K ++ ME+ G
Sbjct: 347 CFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPD 406
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I CK+ + +EA L+D M +G+K + T ++ +E L+ A L
Sbjct: 407 IVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLC 466
Query: 312 SMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
S G D SY + YF + + AL++ K +P T S++ GL
Sbjct: 467 SARRRGYFVDEVSYGTLIIGYF--KHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQ 524
Query: 370 ISKVAEA 376
+ K +A
Sbjct: 525 MGKTNQA 531
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVY 176
I+ Y + A++ ++EM + + S+ N+++ G C + K + + ++
Sbjct: 484 IIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES-- 541
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN +I +C+ G + +M K+ +P+ LL G KE E
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ G YN I SLCK KR EA LL+ M + + P+ TY ++ G
Sbjct: 602 LKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGG 661
Query: 297 FGKEGNLEGAKKLFASMTNGG 317
G ++ A++ + + G
Sbjct: 662 LTDAGRMKDAEEFISKIAEKG 682
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 89/230 (38%), Gaps = 36/230 (15%)
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
L++G + + R++ E K I P+ TYN +I C+ G ++ L E+
Sbjct: 482 TLIIGYFKHEKASQALRLWDEM-KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLE 540
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+ P+ + ++ G+ +E + E K Q K
Sbjct: 541 SGLVPDEITYNTIIHGYCQEGQVE---KAFQFHNK------------------------- 572
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
M+ + KP++ T L+ G KEG LE A KLF + + G + D+ +
Sbjct: 573 -------MVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIIL 625
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
LC+ + A + K P T +++ GL ++ +A E I
Sbjct: 626 SLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFI 675
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 135/295 (45%), Gaps = 25/295 (8%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF-- 172
S+V+ G ++ +D A + ++M ++G+ + N+LL + K+ V+ I
Sbjct: 18 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 77
Query: 173 ---------------PKVY------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
PKV G+EPN TY +I FC+ G + +LA+M+ +
Sbjct: 78 EGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 137
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ N F ++ G+ ++ +D K+ MEK G+ + YN LC++ R +EA
Sbjct: 138 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEA 197
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
K LL M+ G+ PN TY LI K+G++ A++LF M G P + + +
Sbjct: 198 KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHG 257
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G A + + KG+VP T SLV G KV A +L MK+R
Sbjct: 258 YAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 312
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
P ++LD C G + P + + + ++ + A LL +++ + + N+
Sbjct: 90 GGPPKVLDECVGNGVEP----NERTYGVLINGFCKIGQMEAAEMLLADMQGQ-GVGLNQI 144
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I Y + M+D A++ M+K G+ + N L G +E K +
Sbjct: 145 IFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM 204
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
++ G+ PN TY +I C+ GD + EM K P+ + +++ G+ K+
Sbjct: 205 IEM-GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGS 263
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ + + MEK G V Y + C + + A L + M RG +PN+ Y
Sbjct: 264 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTA 323
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
LI G KEG E A +L+ M G PD
Sbjct: 324 LISGLAKEGRSEAAFQLYDDMLKAGLIPDD 353
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 27/348 (7%)
Query: 46 IARLKSESNP---FRILDICCG-ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEEL 101
+A L+ +S+P R+L+ AP S + + V KL A F+ + L+ E+
Sbjct: 60 LAALREQSDPEAALRMLNSALAREDFAPSSAV----YEEIVQKLGTAGAFDLMEGLVREM 115
Query: 102 KTRPDLRQNERFHVHSIVL------YGQANMIDHAMQTFE---EMDKYGLRQSVDALNAL 152
+ E V ++V+ Y + D A+ + D +G++ N L
Sbjct: 116 R-------REGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHL 168
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
L + + ++ ++ E GI+P+ T N +IK+ C + + +L EM
Sbjct: 169 LNVLVEGSKLKLLESVYNEMTG-RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHG 227
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKV-LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ P+ T F L+ GF +E E +V +MME +GV V N+ I CK+ R E+A
Sbjct: 228 VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTV-NVLINGYCKMGRVEDA 286
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ ++ G +P+ TY +HG + G++ A K+ M G +PD + +
Sbjct: 287 LGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC 346
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
L + GE + A + + +G +P +T +L+ L+S +++ EA +L
Sbjct: 347 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDL 394
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 132/303 (43%), Gaps = 6/303 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
S+ +++D+ P D ++ ++ LS+ + ++ ++ R L
Sbjct: 319 SHALKVMDLMLQEGHDP----DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
F+ + L Q N ++ A+ E+ GL V N L+ + R+F E
Sbjct: 375 FNTLIVALSSQ-NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 433
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K G P+ TYN +I C G + +L EM + + ++ K+ +
Sbjct: 434 -KSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E+ +V M+ GI+ +N I LCK KR ++A L++ M+ G++PN TY
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
++ + K+GN++ A + +MT G E D + LC+ G + ALK+ R KG
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 612
Query: 353 WVP 355
P
Sbjct: 613 IRP 615
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 148/331 (44%), Gaps = 14/331 (4%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR- 104
I L S++ LD+ ++ SP D F+I ++ L + + +L EE+K+
Sbjct: 379 IVALSSQNRLEEALDLARELTVKGLSP-DVYTFNILINALCKVGDPHLGIRLFEEMKSSG 437
Query: 105 --PDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
PD ++I++ +M + +A+ EM+ G +S N ++
Sbjct: 438 CTPDEV------TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKM 491
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
EE + +F + GI ++ T+N +I C++ ++ +M ++ ++PN +
Sbjct: 492 RIEEAEEVFDQM-DAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITY 550
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+L + K+ + +L+ M G V Y I LCK R++ A LL GM
Sbjct: 551 NSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRI 610
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ-GGEYE 339
+GI+P Y +I + NL A LF MT G PD+ + + LC+ GG +
Sbjct: 611 KGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIK 670
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
A + KG++P FS+ + L GL ++
Sbjct: 671 EAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 701
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 10/315 (3%)
Query: 74 DRMAFSIAVSKLSQANHFN---AISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDH 129
D++ ++ V L Q H + + L+ + PD+ F ++++ + +D
Sbjct: 301 DQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDV-----FTYNTVINCLSKNGELDE 355
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A +M G N L++ EE + E V G+ P+ T+N +I
Sbjct: 356 AKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL-TVKGLSPDVYTFNILI 414
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ GD + EM+ P+ + +L+ K + +L ME G
Sbjct: 415 NALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCP 474
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I +LCK R EEA+ + D M ++GI + T+ LI G K ++ A +L
Sbjct: 475 RSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATEL 534
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G +P++ + C+ G + A + A G+ T +L+ GL
Sbjct: 535 IEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCK 594
Query: 370 ISKVAEANELIGLMK 384
+ A +L+ M+
Sbjct: 595 AGRTQVALKLLRGMR 609
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 2/277 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ + A+ EEM +G+ L+ G I + E R+ + + G P
Sbjct: 209 RAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEA-GCSPTG 267
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T N +I +C+ G + + P+ + + G + KV+ +
Sbjct: 268 VTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDL 327
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G V YN I L K +EAK +++ M+ RG P+ T+ LI +
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
LE A L +T G PD Y F + LC+ G+ +++ + G P T
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447
Query: 363 LVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
L+ L S+ K+ A +L+ M+ P+S +N +
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTII 484
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TYN VI ++G+ I+ +M + P+ T F L+ +++ E+
Sbjct: 332 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEA 391
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + + G++ V +NI I +LCK+ L + M S G P+ TY LI
Sbjct: 392 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G L A L M + GC + + LC+ E A +V A+G
Sbjct: 452 LCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRS 511
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ GL ++ +A ELI M K
Sbjct: 512 AVTFNTLIDGLCKAKRIDDATELIEQMVK 540
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 130/311 (41%), Gaps = 4/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + + + L +A+ +LEE+ + + +E + + + I+ A++
Sbjct: 196 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSH-GVAPDETTFTTLMQGFIEEGSIEAALRV 254
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+M + G + +N L+ G C + + + + I E G EP+ TYN +
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD--GFEPDQVTYNTFVHGL 312
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++G S ++ M ++ P+ + ++ K + ++ ++ M G
Sbjct: 313 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 372
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I +L R EEA L + +G+ P++ T+ LI+ K G+ +LF
Sbjct: 373 TTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 432
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + GC PD + + LC G+ AL + + G T +++ L +
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492
Query: 373 VAEANELIGLM 383
+ EA E+ M
Sbjct: 493 IEEAEEVFDQM 503
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 88/211 (41%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G++ ++ +N ++ E + S+ EM + I+P+ L+ + H+
Sbjct: 156 FGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRT 215
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L+ M G+A + +Q + E A + M+ G P T LI+
Sbjct: 216 AVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLIN 275
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+ K G +E A G EPD + F + LCQ G ALKV + +G P
Sbjct: 276 GYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDP 335
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +++ L+ ++ EA ++ M R
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDR 366
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 127/256 (49%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM+ +M++ ++ + ++ G + + +F E ++ G + + TYN +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLI 305
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC +G +L +M ++ I PN F +L+ F KE K + ++L+ M + GIA
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I CK R EEA ++D M+S+G P++ T+ LI+G+ K ++ +L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M+ G ++ + CQ G+ E A K+ + +++ P + K L+ GL
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 370 ISKVAEANELIGLMKK 385
++ +A E+ G ++K
Sbjct: 486 NGELEKALEIFGKIEK 501
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A++ + M + G + ++ LN L+ G L+ + + + G +PN TY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET-GFQPNEVTYG 232
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ C+SG ++ +L +M ++I+ +A + +++ G K+ ++ + ME
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + YN I C R ++ LL M+ R I PN+ T+ LI F KEG L A
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L M G P++ + C+ E A+++ ++KG P T L+ G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 367 LASISKVAEANELIGLMKKR 386
+++ + EL M R
Sbjct: 413 YCKANRIDDGLELFREMSLR 432
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 119/269 (44%), Gaps = 2/269 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD + +SI + L + + L E++ + + + + I + A D +
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+M K + +V + L+ + E ++ E + GI PN+ TYN +I F
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGF 378
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ ++ M K P+ F +L+ G+ K ++ +D ++ + M G+ +
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN +Q C+ + E AK L M+SR ++P++ +YK L+ G G LE A ++F
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+ E D + + + +C + + A
Sbjct: 499 IEKSKMELDIGIYMIIIHGMCNASKVDDA 527
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 128/294 (43%), Gaps = 2/294 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ FS+ + + QLL+E+ R + N + I + + N ++ A+Q +
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRG-IAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G + N L+ G + ++ +F E + G+ N+ TYN +++ FC+S
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMS-LRGVIANTVTYNTLVQGFCQS 451
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + EM + +RP+ + +LL G + E ++ +EK + + +Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I I +C + ++A L + +G+K + Y +I ++ +L A LF MT
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
G PD + + + TA ++ + G+ ST+K ++ L+S
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 5/254 (1%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV--YGIEPNSETYNKVIKSF 192
++M+ G+ S+ L ++++ C ++ F+ K+ G EP++ +N ++
Sbjct: 112 KQMESKGIAHSIYTL-SIMINCFC--RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGL 168
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C S ++ M +P L+ G K D ++ M + G
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + +CK ++ A LL M R IK + Y +I G K+G+L+ A LF
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G + D + C G ++ K+ R + + P+ T L+ K
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 373 VAEANELIGLMKKR 386
+ EA++L+ M +R
Sbjct: 349 LREADQLLKEMMQR 362
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 126/318 (39%), Gaps = 7/318 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV--HSIVLYGQANMIDHAM 131
D + ++ + A ++ ++LL ++ R F V S V G+ + A
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK---LREAD 353
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q +EM + G+ + N+L+ G EE ++ + G +P+ T+N +I
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM-VDLMISKGCDPDIMTFNILING 412
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C++ + EM + + N + L+ GF + K E K+ Q M +
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ Y I + LC E+A + + ++ ++ Y +IHG ++ A LF
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
S+ G + D+ + + LC+ A + R +G P T L+
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 372 KVAEANELIGLMKKR-FP 388
A ELI MK FP
Sbjct: 593 DATTAAELIEEMKSSGFP 610
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 4/232 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +AN ID ++ F EM G+ + N L+ G S E K++F E + P
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVS-RRVRP 471
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ +Y ++ C++G+ I ++ + + + + +++ G K +D +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ YNI I LC+ +A L M G P+ TY LI +
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGD 591
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG---GEYETALKVCRASM 349
+ A +L M + G D M L G + L RAS+
Sbjct: 592 DDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRASL 643
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P DF L + K +YE V + + ME GIA + +I I C+ ++ A +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ ++ G +P+ + L++G E + A +L M G +P LC
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ A+ + + G+ P+ T ++ + + A A EL+ M++R
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK----YED 235
P +N++ + ++ V ++ +M K I + +++ F + K +
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+GK++++ G ++N + LC R EA L+D M+ G KP L T L++
Sbjct: 146 MGKIMKL----GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVN 201
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
G G + A L M G +P+ + +C+ G+ A+++ R
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 1/264 (0%)
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M+ + M G +V N ++ + ++ + + P G +PN+ YN V+K
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPS-RGCKPNTVNYNTVLK 59
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C +L EM R++ PN +++ ++ + V + L+ M K G +
Sbjct: 60 GLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTA 119
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN I +C+ + A LL M S G KP++ TY L+ G E A++L
Sbjct: 120 NVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELM 179
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ C PD+ F FLCQ G A +V + KG P+ +T +++ GLA
Sbjct: 180 IKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKA 239
Query: 371 SKVAEANELIGLMKKRFPKSGDMW 394
K+ +A EL+ M + + M+
Sbjct: 240 GKMEQALELLNEMASKGYNTDKMY 263
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 128/292 (43%), Gaps = 5/292 (1%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLL 154
+LL+E+ R + NE V+ IV + ++ + E+M K+G +V NA++
Sbjct: 72 ELLDEM-VRENCPPNEA-TVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVIS 129
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
G + + + + + +G +P+ TYN ++K C + ++ +M +
Sbjct: 130 GMCEQGHVDSALELLSNM-QSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCL 188
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ F +++ ++ +V + M + G Y+ I L K + E+A L
Sbjct: 189 PDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALEL 248
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L+ M S+G + Y+ L KE +E ++ + + G P + F LC+
Sbjct: 249 LNEMASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCR 307
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ + A+ V ++ G +P T L+ GL+ + EA EL+ + R
Sbjct: 308 NGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSR 359
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 138/308 (44%), Gaps = 38/308 (12%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+V Y +A + +AMQ M K G+ ++ N + +++ E+ R F E ++ G
Sbjct: 125 MVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALR-FLERMQLLG 183
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN TYN +IK +C+ +++EM K P+ + ++ K + +V
Sbjct: 184 IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVM 243
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLK------------------------------- 266
V++ ME + + YN I LCK +
Sbjct: 244 DVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSY 303
Query: 267 ----RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
R ++AK +++ M +RG P++ TY +I+GF + G + A+K+ M GC+P++
Sbjct: 304 CKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNT 363
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ F LCQ G A ++ +AS + W P+ T ++ G K+++A +++
Sbjct: 364 VSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVRE 423
Query: 383 M--KKRFP 388
M K FP
Sbjct: 424 MIGKGFFP 431
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 140/314 (44%), Gaps = 4/314 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
D++ ++ + L + H + Q L E + R Q ++ +IV Y + +D A +
Sbjct: 257 DQVTYNTLIHMLCKHQHADEALQFLREAQKRG--FQVDKVGYSAIVDSYCKEGRMDQAKE 314
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EM G V A++ G + + +++ + K +G +PN+ +Y +K
Sbjct: 315 IVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYK-HGCKPNTVSYTAFLKGL 373
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G+SS ++ + PNA + +++ GF +E K D V++ M G
Sbjct: 374 CQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTP 433
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
N+ +QSLC++ R +EAK ++ L+ G N + +IH F ++ ++E A L
Sbjct: 434 VEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDD 493
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M PD+ + L + G E A ++ + KG P T ++++ I +
Sbjct: 494 MYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGR 553
Query: 373 VAEANELIGLMKKR 386
V + L+ M R
Sbjct: 554 VEDLLNLLDKMLTR 567
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 90/244 (36%), Gaps = 35/244 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+ + + V+ S+ +G + +L M++ I PN + + E
Sbjct: 113 GIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKA 172
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN---------- 286
+ L+ M+ GI V YN I+ C L R E+A L+ M +G P+
Sbjct: 173 LRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF 232
Query: 287 ----------LD---------------TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+D TY LIH K + + A + G + D
Sbjct: 233 LCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVD 292
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ C+ G + A ++ +G +P T +++ G + +V +A +++
Sbjct: 293 KVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQ 352
Query: 382 LMKK 385
M K
Sbjct: 353 QMYK 356
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%)
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VY + + L K K + A+ +L M+ RGI+ + ++ + + G L A ++ M
Sbjct: 85 VYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMM 144
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G EP+ + L E AL+ G +P+ T L+ G + +V
Sbjct: 145 QKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRV 204
Query: 374 AEANELIGLM 383
+A ELI M
Sbjct: 205 EDAMELISEM 214
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +PN TY ++ C+SG+++S +L +M + I+P+ + +++ K+ + +D
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDA 284
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
ME GI + V YN I S C R ++ LL M++R I PN+ T+ LI
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDS 344
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG L AK L+ M G EP++ + Y LC + A ++ ++KG P
Sbjct: 345 LVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPD 404
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ G +V + L M R
Sbjct: 405 IWTYNILINGFCKAKQVDDGMRLFRKMSLR 434
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 105/221 (47%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I+P+ TY +I + C+ G S +EM K I+ N + L+ F +++D
Sbjct: 261 IKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGA 320
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++L+ M I V ++ I SL K + EAK L + M++RGI+PN TY LI+G
Sbjct: 321 QLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGL 380
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ L+ A ++ M + GC+PD + + + C+ + + +++ R +G +
Sbjct: 381 CNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADT 440
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
T +L+ G K+ A ++ M + G M A L
Sbjct: 441 VTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAIL 481
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+ N TYN +I SFC G +L +M + I PN F L+ KE K +
Sbjct: 295 GIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEA 354
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M GI YN I LC KR +EA ++D M+S+G P++ TY LI+G
Sbjct: 355 KDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILING 414
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K ++ +LF M+ G D+ + CQ + A KV + +++G P
Sbjct: 415 FCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPG 474
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T L+ GL ++ EA ++ M K
Sbjct: 475 IMTYAILLDGLCDNGELEEALGILDQMHK 503
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 6/296 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAMQT 133
+ FS + L + L E+ TR + N ++ ++YG N +D A Q
Sbjct: 336 VTFSALIDSLVKEGKLTEAKDLYNEMITRG-IEPNT--ITYNSLIYGLCNDKRLDEANQM 392
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ M G + N L+ G +K ++ R+F + + G+ ++ TY+ +I+ FC
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMS-LRGMIADTVTYSTLIQGFC 451
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S + EM + + P + +LL G + E+ +L M KC + +
Sbjct: 452 QSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIG 511
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YNI I +C + ++A +L + S+G+K ++ +Y ++ G K +L A LF M
Sbjct: 512 IYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKM 571
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
G EPD + +G + T++++ G+ ST+K ++ L+S
Sbjct: 572 KEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSS 627
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 132/310 (42%), Gaps = 2/310 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++I + L + + E++T+ ++ N + I + D Q
Sbjct: 266 VTYTIIIDNLCKDGRLDDALSFFSEMETKG-IKANVFTYNSLIGSFCSFGRWDDGAQLLR 324
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M + +V +AL+ + E K ++ E GIEPN+ TYN +I C
Sbjct: 325 DMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMI-TRGIEPNTITYNSLIYGLCND 383
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
++ M K P+ + +L+ GF K + +D ++ + M G+ + Y
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ IQ C+ ++ AK + M+S+G+ P + TY L+ G G LE A + M
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
E D + + + +C + + A + + +KG + +++GL S ++E
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563
Query: 376 ANELIGLMKK 385
A+ L MK+
Sbjct: 564 ADALFRKMKE 573
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 6/293 (2%)
Query: 95 SQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
+QLL ++ TR F + S+V G+ + A + EM G+ + N+L
Sbjct: 320 AQLLRDMITRKITPNVVTFSALIDSLVKEGK---LTEAKDLYNEMITRGIEPNTITYNSL 376
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G K +E ++ + G +P+ TYN +I FC++ + +M +
Sbjct: 377 IYGLCNDKRLDEANQMM-DLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+ + + L+ GF + K KV Q M G+ G+ Y I + LC EEA
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL 495
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
+LD M ++ ++ Y +IHG ++ A LF S+ + G + D + + L
Sbjct: 496 GILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGL 555
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ A + R G+ P T +L+ + + + +LI MK+
Sbjct: 556 CKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKR 608
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 4/257 (1%)
Query: 139 KYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K G + N LL G C+ + +E V+ + + P+ T N ++ C
Sbjct: 153 KLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQH--VPDLITLNTIVNGLCLKDR 210
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
S ++A M +PN +G +L K +L+ ME I V Y I
Sbjct: 211 VSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTI 270
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I +LCK R ++A + M ++GIK N+ TY LI F G + +L M
Sbjct: 271 IIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK 330
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P+ F L + G+ A + + +G P+ T SL+ GL + ++ EAN
Sbjct: 331 ITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEAN 390
Query: 378 ELIGLMKKRFPKSGDMW 394
+++ LM + D+W
Sbjct: 391 QMMDLMVSK-GCDPDIW 406
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 7/270 (2%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--G 177
L + D + ++M+ G+ + LN +++ C + ++ F+ K++ G
Sbjct: 99 LLARTKQYDLVLALCKQMELKGIAYDLYTLN-IMINCFCRR--RKLGFAFSAMGKIFKLG 155
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF-YKEHKYEDV 236
EPN+ T+N ++ C G ++ M P+ ++ G K+ E V
Sbjct: 156 YEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAV 215
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ +MM G Y + +CK + A LL M R IKP++ TY +I
Sbjct: 216 DLIARMMAN-GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K+G L+ A F+ M G + + + + C G ++ ++ R + + P+
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ L K+ EA +L M R
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITR 364
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ F+ M + +V N L +K Y+ V + + ++ GI + T N
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM-ELKGIAYDLYTLNI 130
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC +S + ++ + PN F LL G E + + +++ M
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ N + LC R EA L+ M++ G +PN TY +++ K GN A
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M + +P + + LC+ G + AL KG + T SL+
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSF 310
Query: 368 ASISKVAEANELIGLMKKR 386
S + + +L+ M R
Sbjct: 311 CSFGRWDDGAQLLRDMITR 329
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ KL F A+ ++L +++ E +V ++ YG+ + A+ FE MD Y
Sbjct: 47 IEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYD 106
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+V + NA++ + S +++ +++ + GI P+ ++ +KSFC + +
Sbjct: 107 CEPTVFSYNAIMSILVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCRTSRPHAA 165
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+L M + N + ++ GFY+E+ ++ ++ M G++ ++ +N +
Sbjct: 166 LRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHV 225
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCK +E + LLD ++ RG+ PNL TY I G ++G L+ A ++ + + G +PD
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPD 285
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ Y LC+ +++ A + +G P T +L+ G V A ++
Sbjct: 286 VVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERIL 344
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +I C G+++ ++ E K I+PN + L+ G + +
Sbjct: 351 GFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEA 410
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G+ V +NI + LCK+ +A L+ M+S+G P++ T+ LIHG
Sbjct: 411 AQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ + +E A ++ M + G +PD Y + LC+ +YE ++ + + KG P+
Sbjct: 471 YSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPN 530
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ L K+ +A L+ MK +
Sbjct: 531 LFTFNILLESLCRYHKLDKALGLLEEMKNK 560
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 135/315 (42%), Gaps = 49/315 (15%)
Query: 115 VHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALL-----LGCILSKNYEEVKR 167
+++ ++ G +N +I A Q EM + GL V N L+ +GC+ S VK
Sbjct: 393 LYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV-SDADGLVKV 451
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ ++ G P+ T+N +I + + IL M + P+ + LL G
Sbjct: 452 MISK-----GYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGL 506
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN- 286
K KYEDV + + M + G A + +NI ++SLC+ + ++A LL+ M ++ + P+
Sbjct: 507 CKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDA 566
Query: 287 ---------------LD--------------------TYKHLIHGFGKEGNLEGAKKLFA 311
LD TY +IH F ++ N+ A+KLF
Sbjct: 567 VTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQ 626
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + PD Y + + C+ G + K M G++P +T+ ++ L
Sbjct: 627 EMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVED 686
Query: 372 KVAEANELIGLMKKR 386
+V EA +I M ++
Sbjct: 687 RVYEAAGIIHRMVQK 701
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 145/342 (42%), Gaps = 15/342 (4%)
Query: 23 TSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPL--DRMAFSI 80
T+ L+ +EA IK +K SN IL+ AS E L + F+I
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431
Query: 81 AVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMI--DHAMQTFE 135
V+ L + + L++ + ++ PD+ +I+++G + + ++A++ +
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDI------FTFNILIHGYSTQLKMENALEILD 485
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G+ V N+LL G + YE+V + + G PN T+N +++S C
Sbjct: 486 VMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVE-KGCAPNLFTFNILLESLCRY 544
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS-GVNV 254
+L EM+ KS+ P+A FG L+ GF K + + + ME+ + S
Sbjct: 545 HKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPT 604
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YNI I + + A+ L M+ R + P+ TY+ ++ GF K GN++ K M
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMM 664
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G P LC A + + KG VP
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ T+NK++ C+ GD +L ++ ++ + PN + + G ++ + +
Sbjct: 211 GVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAA 270
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ + G V YN I LCK + +EA+ L +++ G++P+ TY LI G
Sbjct: 271 VRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAG 330
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K G ++ A+++ + G PD + + LC GE AL + ++ KG P+
Sbjct: 331 YCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+L+ GL++ + EA +L M ++
Sbjct: 391 VILYNTLIKGLSNQGLILEAAQLASEMSEK 420
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 4/317 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +F+I + + + +A +LL + ++ N + + + + N D +
Sbjct: 145 DVYSFTIRMKSFCRTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKDEGYEL 203
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M G+ + N LL + +E +++ + K G+ PN TYN I+ C
Sbjct: 204 FGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIK-RGVLPNLFTYNFFIQGLC 262
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G+ + ++ + + +P+ + L+ G K K+++ L + G+
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I CK + A+ +L + G P+ TY+ LI G EG A LF
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G +P+ + L G A ++ KG +P T LV GL + V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 374 AEANELIGLM--KKRFP 388
++A+ L+ +M K FP
Sbjct: 443 SDADGLVKVMISKGYFP 459
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+PN YN +IK G + +EM K + P F +L+ G K D
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++++M G + +NI I + E A +LD M+ G+ P++ TY L++G
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNG 505
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K E + + +M GC P+ + F + LC+ + + AL + K P
Sbjct: 506 LCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPD 565
Query: 357 FSTMKSLVTGLA 368
T +L+ G
Sbjct: 566 AVTFGTLIDGFC 577
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 3/277 (1%)
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKY-GLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
HV +++ + M A++ F M K G + ++ +++ L +E ++ + +
Sbjct: 9 HVTTVIRCQKDPM--KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDM 66
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G Y +K++ G ++ M P + +++
Sbjct: 67 RQNVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGY 126
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
++ KV M GI V + IR++S C+ R A LL+ M S+G + N+ Y
Sbjct: 127 FDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCT 186
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
++ GF +E + +LF M G F + LC+ G+ + K+ + +G
Sbjct: 187 VVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRG 246
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+P+ T + GL ++ A ++G + + PK
Sbjct: 247 VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPK 283
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 143/315 (45%), Gaps = 10/315 (3%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMID 128
SP D ++++I ++ + L E+ PD+ ++ ++ G +A +D
Sbjct: 190 SP-DVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVV------TYNTIIDGLCKAQEVD 242
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F++M + G++ + N ++ G ++ + + +F + G++P++ TYN +
Sbjct: 243 RAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVD-KGVKPSNVTYNTI 301
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C++ + +M + ++P+ + ++ G K + V Q M G+
Sbjct: 302 IDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGV 361
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y I I LCK + + A+ + M+ +G+KPN TY LIHG+ G E +
Sbjct: 362 KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQ 421
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M+ EPD + + + +LC+ G+ A + + + KG P + ++ G
Sbjct: 422 RIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYG 481
Query: 369 SISKVAEANELIGLM 383
++E ++L+ LM
Sbjct: 482 KKGALSEMHDLLNLM 496
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 145/315 (46%), Gaps = 12/315 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMID 128
D + ++ + L +A + + +++ +PD ++I++ G +A +D
Sbjct: 329 DHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPD------NLTYTIIIDGLCKAQSVD 382
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F++M G++ + N L+ G + + +EEV + E + +EP+ TY +
Sbjct: 383 RAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM-SAHDLEPDVFTYGLL 441
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C++G + S+ M RK I+P+ T +G++L G+ K+ ++ +L +M GI
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ ++N I + K +E + M +G+ PN+ TY LI K G ++ A
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
F M N G P++ F Y LC ++E ++ + +G P +++ L
Sbjct: 562 QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLC 621
Query: 369 SISKVAEANELIGLM 383
+V EA LI M
Sbjct: 622 KEGRVMEARRLIDSM 636
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A F++M G++ N ++ G ++ ++ + +F + G++P++
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMID-KGVKPDN 365
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY +I C++ + +M K ++PN + L+ G+ ++E+V + ++
Sbjct: 366 LTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKE 425
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + V Y + + LCK + EA++L D M+ +GIKP++ Y ++HG+GK+G
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L L M G P+ F + + + + +G P+ T +
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545
Query: 363 LVTGLASISKVAEA 376
L+ L + +V +A
Sbjct: 546 LIDALCKLGRVDDA 559
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 2/225 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+EV IF + K G+ PN TY +I + C+ G +M + + PN F
Sbjct: 522 DEVMHIFIKM-KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K+E V ++ M GI + +N + +LCK R EA+ L+D M+ G
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+KP++ +Y LI G ++ A KL M + G +P+ + + C+ G + A
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL-IGLMKKR 386
+ R + KG P T +++ GL + +EA EL + ++K R
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 1/254 (0%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F EM G+R + N +L E +R+ G++P+ +YN +I
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMV-CMGLKPDVISYNTLIDG 654
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C + +L M ++PN + LL G+ K + ++ + + M + G+ G
Sbjct: 655 HCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPG 714
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN + L + R EA+ L M+ ++ TY ++ GF K + A K+F
Sbjct: 715 VETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQ 774
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
S+ + + D F + L +GG E A+ + A A G VP T + + L
Sbjct: 775 SLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEG 834
Query: 372 KVAEANELIGLMKK 385
+ E + L +M+K
Sbjct: 835 SLEELDCLFSVMEK 848
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 15/269 (5%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-----GIEPNSET 184
A++ F+E+ + SV ALN LL +K K + F ++ + P+ T
Sbjct: 27 ALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCT 86
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY-EDVGKVLQMM 243
Y+ VI FC G ++ + + R + LL G + E + +L+ M
Sbjct: 87 YSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQM 146
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML---SRGIKPNLDTYKHLIHGFGKE 300
+ G GV YN ++ LC +R+EEA+ LL M+ P++ +Y +I+GF E
Sbjct: 147 PEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNE 206
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G ++ A LF M G PD + LC+ E + A V + + KG P+ T
Sbjct: 207 GQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTY 263
Query: 361 KSLVTGLASISKVAEANELIGLMKKRFPK 389
+++ GL +V A G+ +K K
Sbjct: 264 NTIIDGLCKAQEVDMAE---GVFQKMVDK 289
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 10/307 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
+ + F+ V L + + + +L E+ RPD+ F + + + A
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIV----FFNTVLCNLCKEGRVMEA 629
Query: 131 MQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
+ + M GL+ V + N L+ G C S+ E VK + G++PN +YN ++
Sbjct: 630 RRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSA--GLKPNIVSYNTLL 687
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C++G + Y + EM RK + P + +L G ++ ++ + ++ M K
Sbjct: 688 HGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKL 747
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+I + CK +EA + + S ++ ++ T+ +I G K G E A L
Sbjct: 748 WSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDL 807
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
FA++ G P + + L + G E + G P+ + +L+ L
Sbjct: 808 FAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLD 867
Query: 370 ISKVAEA 376
++ A
Sbjct: 868 RGEIPRA 874
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 1/250 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F +M + + + ++L+ G S ++E + E I P+ T++ +
Sbjct: 333 ALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS-RNIRPDVVTFSIWV 391
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ G S SI+ M + +RPN + L+ G+ + ++ KV +M G A
Sbjct: 392 DVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCA 451
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YNI I+ CK +R +EAK L D M +G+ PN T+ LI G + G AK+L
Sbjct: 452 PDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKEL 511
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M + GC PD + C+ G + AL + A P+ K L+ G+
Sbjct: 512 FKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCK 571
Query: 370 ISKVAEANEL 379
K+ +A EL
Sbjct: 572 AGKLEDAKEL 581
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 119 VLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
++YG N A F+EM ++ ++ V + L+ E +F + ++
Sbjct: 285 LIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI- 343
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
+EP+ TY+ +I C+S ++L EM ++IRP+ F + + F K+ +
Sbjct: 344 AMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEA 403
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ +M + G+ V YN + C + +EA+ + D M+++G P++ +Y LI G
Sbjct: 404 QSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG 463
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K ++ AK+LF M++ G P+S LCQ G A ++ + + G P
Sbjct: 464 YCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPD 523
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L++G + EA L +KK
Sbjct: 524 LITYSTLLSGFCKHGHLDEALALFEALKK 552
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 2/248 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S + + +++ + S LL E+ +R ++R + + ++ + M+ A
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSR-NIRPDVVTFSIWVDVFCKKGMVSEAQSI 406
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + GLR +V N+L+ G L +E +++F + G P+ +YN +IK +C
Sbjct: 407 INLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF-DIMVNKGCAPDVLSYNILIKGYC 465
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S + EM K + PN+ L++G + + ++ + M G +
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ + CK +EA AL + + +KPN K L+ G K G LE AK+LF+S+
Sbjct: 526 TYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585
Query: 314 TNGGCEPD 321
+ +PD
Sbjct: 586 SIEELQPD 593
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 35/238 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P TYN +I C SG + EM +++P+ F +L+ KE +
Sbjct: 274 GISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEA 333
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS---------------- 280
V M + + + Y+ I +CK +E+ LL+ MLS
Sbjct: 334 LSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDV 393
Query: 281 -------------------RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
RG++PN+ TY L+ G+ ++ A+K+F M N GC PD
Sbjct: 394 FCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPD 453
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + C+ + A ++ KG P+ T +L++GL + A EL
Sbjct: 454 VLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKEL 511
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 105/249 (42%), Gaps = 3/249 (1%)
Query: 139 KYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K G + S+ N L+ G CI + E ++++ ++ G +P T+ ++ C+ G
Sbjct: 167 KLGFKPSIITFNTLINGLCIEGRIVEAMEQL--DYIMSRGYQPTVYTHTMIVNGLCKIGK 224
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+S+ + +M P + +++ K + + M GI+ V YN
Sbjct: 225 TSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNS 284
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I +C + ++A L ML +KP++ T+ L+ KEG + A +F M
Sbjct: 285 LIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIA 344
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
EPD + + +C+ ++ + + +++ P T V V+EA
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404
Query: 378 ELIGLMKKR 386
+I LM +R
Sbjct: 405 SIINLMIER 413
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 5/261 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETY 185
D + + +M+ +G+ SV L +L+ C+ + V F+ K++ G +P+ T+
Sbjct: 121 DSVVSIYRKMEFFGVSCSVYTL-TILINCLC--HLHLVGLGFSVLGKIFKLGFKPSIITF 177
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I C G L + + +P +++ G K K ++ M +
Sbjct: 178 NTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVE 237
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
V Y+I I SLCK + EA L M S GI P + TY LI+G G +
Sbjct: 238 LDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQ 297
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF M +PD F + LC+ G AL V + P T SL+
Sbjct: 298 ASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIH 357
Query: 366 GLASISKVAEANELIGLMKKR 386
G+ S E++ L+ M R
Sbjct: 358 GVCKSSLWKESSTLLNEMLSR 378
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
EP +Y+ +I S C++ + + MR I P + L+ G +++
Sbjct: 241 EPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ + M + + V ++I + +LCK EA ++ M+ ++P++ TY LIHG
Sbjct: 301 LFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVC 360
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K + + L M + PD F ++ C+ G A + + +G P+
Sbjct: 361 KSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV 420
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ G S++ EA ++ +M +
Sbjct: 421 TYNSLMDGYCLHSQMDEARKVFDIMVNK 448
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 74 DRMAFSIAVS---KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D + FSI V K + +I L+ E RP++ + L+ Q +D A
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSL-MDGYCLHSQ---MDEA 438
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F+ M G V + N L+ G S+ +E K++F E G+ PNS T+ +I
Sbjct: 439 RKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH-KGLTPNSITHTTLIS 497
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G + + +M P+ + LL+GF K ++ + + ++K +
Sbjct: 498 GLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKP 557
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ I + +CK + E+AK L + ++P++
Sbjct: 558 NHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 3/202 (1%)
Query: 186 NKVIKSFCESGDSSSVYSILA---EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
N ++ C+ G S+ LA +M + P T F LLA + Y+ V + +
Sbjct: 70 NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
ME G++ V I I LC L ++L + G KP++ T+ LI+G EG
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A + + + G +P Y M LC+ G+ A+ + + P +
Sbjct: 190 IVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSI 249
Query: 363 LVTGLASISKVAEANELIGLMK 384
++ L V EA +L M+
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMR 271
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 3/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
I +A M + G ++ N ++ G CIL + + + + G N TY
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR--GHSANLVTY 463
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +IK +C+SG+++S IL MR +P+ + L+ GF K K E + M
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y I CK ++ + A +LL+ M G +PN+ TY LIHG K+ N G
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++L M G P+ + LC+ G AL++ + +G +P+ T SL+
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643
Query: 366 GLASISKVAEANELIGLMKK 385
L KV EA L +++
Sbjct: 644 ALGQEGKVEEAENLFAELER 663
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EM +G+ + ++ YE+ R+F + K G EPN TY
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM-KNKGCEPNVYTYT 359
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C SG + M R + PN + L+ + + + VL +M +
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + YN I+ C L ++A +++ ML RG NL TY +I G+ GN A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M +GGC+PD + + C+ + E+A + + G P+ T +L+ G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539
Query: 367 LASISKVAEANELIGLMKK 385
K+ A L+ MK+
Sbjct: 540 YCKDEKLDTATSLLEHMKR 558
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 3/239 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ + M G + + L+ G C +SK E +F E G+ PN TY +
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISK-MESAFGLFNEMVD-DGLCPNEVTYTAL 536
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C+ + S+L M+R RPN + +L+ G K++ + ++ ++M + GI
Sbjct: 537 IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y I LCK + A + + M+ +G PNL TY LI G+EG +E A+
Sbjct: 597 FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LFA + G PD + G+ E A + G P T L+ GL
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 9/259 (3%)
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
M + + + GLR + A +ALL+ + + + R+ +E G++PN YN
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-----GVQPNLLIYN 219
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI + C+ G+ + +I+ ++ + P+ + ++ G ++H + +V M K
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y+ I LC R EA L+ M+ GI P T I G E A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M N GCEP+ Y + LC G + A+ + G P+ T +L+
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Query: 367 LASISKVAEANELIGLMKK 385
L ++ A ++ LM +
Sbjct: 400 LVENRRIKYAFVVLNLMGR 418
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM M + G ++ N ++ G S N RI + + G +P+ +Y ++I
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL-DLMRDGGCKPDEWSYTELI 502
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ S + + EM + PN + L+ G+ K+ K + +L+ M++ G
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN+ I L K A+ L M+ GI PN+ TY +I G K G+ A ++
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M GC P+ + L Q G+ E A + G +P T ++
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682
Query: 370 ISKVAEANELIGLMKK 385
KV A +G M K
Sbjct: 683 SGKVEHAFNFLGRMIK 698
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 143/338 (42%), Gaps = 31/338 (9%)
Query: 53 SNPFRILDICCGASLAPE--SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN 110
++ RILD+ P+ S + + +SK+ A F ++++++ L N
Sbjct: 477 TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA--FGLFNEMVDD-----GLCPN 529
Query: 111 ERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY---EEVKR 167
E + I Y + +D A E M + G R +V N L+ G N+ EE+ +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E GI PN TY +I C++G +S + +M + PN + L+
Sbjct: 590 VMIE----EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+E K E+ + +E+ G+ Y I++ + E A L M+ G +P L
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LI G E L A + A++ PD F Y + A+ V A
Sbjct: 706 WTYGVLIKGLKNEYLL--ADQRLAAL------PDVVPNCSFGYQTTD----QDAVSVMSA 753
Query: 348 SMAKGWVPHFS--TMKSLVTGLASISKVAEANELIGLM 383
+A+ P S +LV+ L++ + EANEL+G M
Sbjct: 754 KLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 25/281 (8%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F +M + G ++ ++L+ EE + +F E + +G+ P+ TY K+I
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER-HGLIPDEITYVKMI 677
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED--VGKVLQMMEKCG 247
+++ SG ++ L M + +P +G+L+ G E+ D + + ++ C
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737
Query: 248 IAS----------------------GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
V V N + +L R EA LL M+S+G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ + Y L+ + N++ A +F M+ GCE + LCQ + A
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + W P L+ GL E + +M+ R
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
>gi|326487712|dbj|BAK05528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 455
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 8/222 (3%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKS---IRPNATDFGLLLAGFYKEHKYEDV 236
PN+ YN +IK + ++GDS + + +L EMR + +RPN + LL G + K ++
Sbjct: 198 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 257
Query: 237 GKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ + M+EK I YN+ I C+L + E+A+ + M +PN Y LI+
Sbjct: 258 FELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 317
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G K+G++E AK +F M + G EPD+ + LC+ G + + + KG
Sbjct: 318 GHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKA 377
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
T L+ GL ++AE +L+G R P+ G N A
Sbjct: 378 DVVTYNLLLEGLCKDGRMAEVMDLLG----RLPEEGVQLNVA 415
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 129/291 (44%), Gaps = 12/291 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN----ERFHVHSIVL--YGQANMIDHA 130
A ++ + +L + + ++ L+ +L+ DLR V++I++ Y + + A
Sbjct: 163 ALAVCLDRLVSSRCPDVLADLIADLR---DLRNKYLPAPNTCVYNILIKHYVKNGDSETA 219
Query: 131 MQTFEEMDKY---GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ +EM +Y +R ++ + LL G + +E +F + I P+ TYN
Sbjct: 220 FRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNV 279
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC G +I MR+ PNA ++ L+ G K+ E+ V + M G
Sbjct: 280 IIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAG 339
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y I LC+ +E L+ M +G K ++ TY L+ G K+G +
Sbjct: 340 VEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVM 399
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
L + G + + + + LC G+ E A+ + + +G++PH++
Sbjct: 400 DLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYA 450
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 3/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
I +A M + G ++ N ++ G CIL + + + + G N TY
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR--GHSANLVTY 463
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +IK +C+SG+++S IL MR +P+ + L+ GF K K E + M
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y I CK ++ + A +LL+ M G +PN+ TY LIHG K+ N G
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++L M G P+ + LC+ G AL++ + +G +P+ T SL+
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643
Query: 366 GLASISKVAEANELIGLMKK 385
L KV EA L +++
Sbjct: 644 ALGQEGKVEEAENLFAELER 663
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EM +G+ + ++ YE+ R+F + K G EPN TY
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM-KNKGCEPNVYTYT 359
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C SG + M R + PN + L+ + + + VL +M +
Sbjct: 360 ALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + YN I+ C L ++A +++ ML RG NL TY +I G+ GN A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M +GGC+PD + + C+ + E+A + + G P+ T +L+ G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539
Query: 367 LASISKVAEANELIGLMKK 385
K+ A L+ MK+
Sbjct: 540 YCKDEKLDTATSLLEHMKR 558
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 3/239 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ + M G + + L+ G C +SK E +F E G+ PN TY +
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISK-MESAFGLFNEMVD-DGLCPNEVTYTAL 536
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C+ + S+L M+R RPN + +L+ G K++ + ++ ++M + GI
Sbjct: 537 IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y I LCK + A + + M+ +G PNL TY LI G+EG +E A+
Sbjct: 597 FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LFA + G PD + G+ E A + G P T L+ GL
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 9/259 (3%)
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
M + + + GLR + A +ALL+ + + + R+ +E G++PN YN
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-----GVQPNLLIYN 219
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI + C+ G+ + +I+ ++ + P+ + ++ G ++H + +V M K
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y+ I LC R EA L+ M+ GI P T I G E A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M N GCEP+ Y + LC G + A+ + G P+ T +L+
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Query: 367 LASISKVAEANELIGLMKK 385
L ++ A ++ LM +
Sbjct: 400 LVENRRIKYAFVVLNLMGR 418
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM M + G ++ N ++ G S N RI + + G +P+ +Y ++I
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL-DLMRDGGCKPDEWSYTELI 502
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ S + + EM + PN + L+ G+ K+ K + +L+ M++ G
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN+ I L K A+ L M+ GI PN+ TY +I G K G+ A ++
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M GC P+ + L Q G+ E A + G +P T ++
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682
Query: 370 ISKVAEANELIGLMKK 385
KV A +G M K
Sbjct: 683 SGKVEHAFNFLGRMIK 698
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 143/338 (42%), Gaps = 31/338 (9%)
Query: 53 SNPFRILDICCGASLAPE--SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN 110
++ RILD+ P+ S + + +SK+ A F ++++++ L N
Sbjct: 477 TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA--FGLFNEMVDD-----GLCPN 529
Query: 111 ERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY---EEVKR 167
E + I Y + +D A E M + G R +V N L+ G N+ EE+ +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E GI PN TY +I C++G +S + +M + PN + L+
Sbjct: 590 VMIE----EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+E K E+ + +E+ G+ Y I++ + E A L M+ G +P L
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LI G E L A + A++ PD F Y + A+ V A
Sbjct: 706 WTYGVLIKGLKNEYLL--ADQRLAAL------PDVVPNCSFGYQTTD----QDAVSVMSA 753
Query: 348 SMAKGWVPHFS--TMKSLVTGLASISKVAEANELIGLM 383
+A+ P S +LV+ L++ + EANEL+G M
Sbjct: 754 KLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 25/281 (8%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F +M + G ++ ++L+ EE + +F E + +G+ P+ TY K+I
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER-HGLIPDEITYVKMI 677
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED--VGKVLQMMEKCG 247
+++ SG ++ L M + +P +G+L+ G E+ D + + ++ C
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737
Query: 248 IAS----------------------GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
V V N + +L R EA LL M+S+G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ + Y L+ + N++ A +F M+ GCE + LCQ + A
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + W P L+ GL E + +M+ R
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 143/349 (40%), Gaps = 37/349 (10%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAM 131
LD A+ + LS+ F A+ L+EE++ P L + F V + + A M+ A+
Sbjct: 154 LDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVF-VILMRRFASARMVHKAV 212
Query: 132 QTFEEMDKYG----------------------------------LRQSVDALNALLLGCI 157
+ +EM KYG + SV +LL G
Sbjct: 213 EVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLYGWC 272
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
E K + + K GIEP+ YN ++ + ++G Y +L EMRRK PNA
Sbjct: 273 KEGKLMEAKHVLVQM-KDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNA 331
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
T + +L+ K + E+ ++ M+ G + V Y+ I CK + + LLD
Sbjct: 332 TSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDE 391
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M+ +G PN Y+H++ K+ LE K+L M GC PD + C+ GE
Sbjct: 392 MIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGE 451
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +++ + G P T ++ G + EA E M R
Sbjct: 452 VKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGR 500
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 113/283 (39%), Gaps = 46/283 (16%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR--PDLRQNERFHVHSIVLYG--QANMIDH 129
D F + L + + L E+++ R P ++ H S+ LYG + +
Sbjct: 226 DEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVK-----HFTSL-LYGWCKEGKLME 279
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A +M G+ + N LL G + + + E + EPN+ +Y +I
Sbjct: 280 AKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKR-CEPNATSYTVLI 338
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK----YEDVGKVLQM--- 242
+S C+ + EM+ + + + L++GF K K YE + +++Q
Sbjct: 339 QSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHF 398
Query: 243 ----------------------------MEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
M+K G A +++YN I+ CKL +E L
Sbjct: 399 PNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQL 458
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ M S G+ P +DT+ +I+GF ++G L A + F M G
Sbjct: 459 WNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRG 501
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 100/242 (41%), Gaps = 11/242 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S +S + +LL+E+ + N+ + H ++ + + ++ +
Sbjct: 365 DVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHF-PNQVIYQHIMLAHEKKEELEECKEL 423
Query: 134 FEEMDKYGLRQSVDALNALL-LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EM K G + N ++ L C L + E ++ ++ E + G+ P +T+ +I F
Sbjct: 424 VNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQ-LWNEM-ESSGLSPGMDTFVIMINGF 481
Query: 193 CESGDSSSVYSILAEMRRKSI--RPNATDFGLLLAGFYKEHKYE---DVGKVLQMMEKCG 247
E G EM + + P L+ + K E D + + C
Sbjct: 482 LEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQ 541
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V+ + I I +L +EA + M+ + + PN DT+ L+HG K N + A
Sbjct: 542 L--NVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLKKLYNRQFAA 599
Query: 308 KL 309
++
Sbjct: 600 EI 601
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 3/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
I +A M + G ++ N ++ G CIL + + + + G N TY
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR--GHSANLVTY 463
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +IK +C+SG+++S IL MR +P+ + L+ GF K K E + M
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y I CK ++ + A +LL+ M G +PN+ TY LIHG K+ N G
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++L M G P+ + LC+ G AL++ + +G +P+ T SL+
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIR 643
Query: 366 GLASISKVAEANELIGLMKK 385
L KV EA L +++
Sbjct: 644 ALGQEGKVEEAENLFAELER 663
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EM +G+ + ++ YE+ R+F + K G EPN TY
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM-KNKGCEPNVYTYT 359
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C SG + M R + PN + L+ + + + VL +M +
Sbjct: 360 ALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRN 419
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + YN I+ C L ++A +++ ML RG NL TY +I G+ GN A
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSA 479
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M +GGC+PD + + C+ + E+A + + G P+ T +L+ G
Sbjct: 480 LRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDG 539
Query: 367 LASISKVAEANELIGLMKK 385
K+ A L+ MK+
Sbjct: 540 YCKDEKLDTATSLLEHMKR 558
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 3/239 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ + M G + + L+ G C +SK E +F E G+ PN TY +
Sbjct: 479 ALRILDLMRDGGCKPDEWSYTELICGFCKISK-MESAFGLFNEMVD-DGLCPNEVTYTAL 536
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C+ + S+L M+R RPN + +L+ G K++ + ++ ++M + GI
Sbjct: 537 IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y I LCK + A + + M+ +G PNL TY LI G+EG +E A+
Sbjct: 597 FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LFA + G PD + G+ E A + G P T L+ GL
Sbjct: 657 LFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 9/259 (3%)
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
M + + + GLR + A +ALL+ + + + R+ +E G++PN YN
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE-----GVQPNLLIYN 219
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI + C+ G+ + +I+ ++ + P+ + ++ G ++H + +V M K
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y+ I LC R EA L+ M+ GI P T I G E A
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M N GCEP+ Y + LC G + A+ + G P+ T +L+
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399
Query: 367 LASISKVAEANELIGLMKK 385
L ++ A ++ LM +
Sbjct: 400 LVENRRIKYAFVVLNLMGR 418
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM M + G ++ N ++ G S N RI + + G +P+ +Y ++I
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL-DLMRDGGCKPDEWSYTELI 502
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ S + + EM + PN + L+ G+ K+ K + +L+ M++ G
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN+ I L K A+ L M+ GI PN+ TY +I G K G+ A ++
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M GC P+ + L Q G+ E A + G +P T ++
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIM 682
Query: 370 ISKVAEANELIGLMKK 385
KV A +G M K
Sbjct: 683 SGKVEHAFNFLGRMIK 698
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 145/338 (42%), Gaps = 31/338 (9%)
Query: 53 SNPFRILDICCGASLAPE--SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN 110
++ RILD+ P+ S + + +SK+ A F ++++++ L N
Sbjct: 477 TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA--FGLFNEMVDD-----GLCPN 529
Query: 111 ERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY---EEVKR 167
E + I Y + +D A E M + G R +V N L+ G N+ EE+ +
Sbjct: 530 EVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCK 589
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E GI PN TY +I C++G +S + +M + PN + L+
Sbjct: 590 VMIE----EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRAL 645
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+E K E+ + +E+ G+ Y I++ + E A L M+ G +P L
Sbjct: 646 GQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTL 705
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LI G E L A + A++ PD F Y Q + + A+ V A
Sbjct: 706 WTYGVLIKGLKNEYLL--ADQRLAAL------PDVVPNCSFGY---QTTD-QDAVSVMSA 753
Query: 348 SMAKGWVPHFS--TMKSLVTGLASISKVAEANELIGLM 383
+A+ P S +LV+ L++ + EANEL+G M
Sbjct: 754 KLAE-LDPGLSVQVQNALVSNLSTAGRWFEANELLGSM 790
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 25/281 (8%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F +M + G ++ ++L+ EE + +F E + +G+ P+ TY K+I
Sbjct: 619 ALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELER-HGLIPDEITYVKMI 677
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED--VGKVLQMMEKCG 247
+++ SG ++ L M + +P +G+L+ G E+ D + + ++ C
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737
Query: 248 IAS----------------------GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
V V N + +L R EA LL M+S+G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ + Y L+ + N++ A +F M+ GCE + LCQ + A
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + W P L+ GL E + +M+ R
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 133/263 (50%), Gaps = 12/263 (4%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK---RIFTEFPKVYGIE 179
+A ++ A + F+++ YG+ SVD+ N L LS +++ ++ R+F E+ +V G+
Sbjct: 193 EAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLAR--LSNSFDGIRTAFRVFREYSEV-GVC 249
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
N+ +YN ++ C+ G +S+L +M + P+ + +++ G+ + E +GKV
Sbjct: 250 WNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ---VEQLGKV 306
Query: 240 LQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
L++ME+ G+ YN I LCK R EA+ +L M ++ I P+ Y LI G
Sbjct: 307 LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISG 366
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
FGK GN+ KLF M PD + + LCQ G+ A K+ ++KG P
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPD 426
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T +L+ G ++ EA L
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSL 449
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 2/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++S+ V Q + +L+EEL+ R L+ N+ + I + + A Q
Sbjct: 286 DVVSYSVIVDGYCQVEQLGKVLKLMEELQ-RKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + L+ G S N ++F E K I P+ TY +I C
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM-KRKKIVPDFVTYTSMIHGLC 403
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G + +EM K ++P+ + L+ G+ K + ++ + M + G+ V
Sbjct: 404 QAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVV 463
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + LCK + A LL M +G++PN+ TY LI+G K GN+E A KL M
Sbjct: 464 TYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM 523
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD+ + C+ GE A ++ R + KG P T L+ G +
Sbjct: 524 DLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGML 583
Query: 374 AEANELIGLM 383
+ LI M
Sbjct: 584 EDGERLIKWM 593
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 137/308 (44%), Gaps = 12/308 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMID 128
D + ++ +S ++ + + +L +E+K + PD F ++ +++G QA +
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPD------FVTYTSMIHGLCQAGKVV 409
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F EM GL+ AL+ G + +E + + + G+ PN TY +
Sbjct: 410 EARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVE-KGLTPNVVTYTAL 468
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+ G+ +L EM K ++PN + L+ G K E K+++ M+ G
Sbjct: 469 VDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGF 528
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y + + CK+ +A LL ML +G++P + T+ L++GF G LE ++
Sbjct: 529 FPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGER 588
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M + G P++ F C +++ + A+G VP +T L+ G
Sbjct: 589 LIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHC 648
Query: 369 SISKVAEA 376
+ EA
Sbjct: 649 KARNMKEA 656
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 106/262 (40%), Gaps = 34/262 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE------FPKVY---- 176
+D A + EM + GL+ +V NAL+ G N E+ ++ E FP
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537
Query: 177 ------------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
G++P T+N ++ FC SG ++ M K
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
I PNAT F L+ + + ++ + M G+ N YNI I+ CK + +EA
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L M+ +G +Y LI GF K E A+KLF M G + + +F
Sbjct: 658 FLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVN 717
Query: 333 CQGGEYETALKVCRASMAKGWV 354
+ G +E L++C ++ K V
Sbjct: 718 YEEGNWENTLELCDEAIEKCLV 739
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 132/311 (42%), Gaps = 2/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ + L QA +L E+ ++ L+ +E + I Y +A + A
Sbjct: 391 DFVTYTSMIHGLCQAGKVVEARKLFSEMLSK-GLKPDEVTYTALIDGYCKAGEMKEAFSL 449
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M + GL +V AL+ G + + E + G++PN TYN +I C
Sbjct: 450 HNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE-KGLQPNVCTYNALINGLC 508
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G+ ++ EM P+ + ++ + K + ++L++M G+ +
Sbjct: 509 KVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIV 568
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N+ + C E+ + L+ ML +GI PN T+ L+ + N+ +++ M
Sbjct: 569 TFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGM 628
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD+ + + C+ + A + + + KG+ ++ SL+ G K
Sbjct: 629 HAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKF 688
Query: 374 AEANELIGLMK 384
EA +L M+
Sbjct: 689 EEARKLFEEMR 699
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 148/314 (47%), Gaps = 11/314 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + + + KL + + +A+ +L ++K + F + + Y + + D A++ F
Sbjct: 74 LTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSF-ICVLNSYKNSGLGDRALKMFY 132
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETYNKVIKSFC 193
+ ++G + +V N LL +L ++ + I + + G +EPN TYN ++K+ C
Sbjct: 133 RIKEFGCKPTVKIYNHLL-DALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALC 191
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G +L EM ++ P+ + ++A ++ + E+ +V + G+ S
Sbjct: 192 KNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVS--- 248
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
V N I LC+ R E L+D M+ G+ PN+ +Y +I G +E A + M
Sbjct: 249 VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKM 308
Query: 314 TNGGCEPDSYCF--FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
GC P+ + F M YFL GG + + R + +G P+ +L+ GL
Sbjct: 309 IRRGCRPNVHTFSSLMKGYFL--GGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSG 366
Query: 372 KVAEANELIGLMKK 385
+AEA ++ G M+K
Sbjct: 367 NLAEAVDVCGRMEK 380
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 117/288 (40%), Gaps = 37/288 (12%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E ++G V NAL+ G EV + E G++PN +Y+ VI +
Sbjct: 236 EVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVG-NGVDPNVVSYSSVISWLSD 294
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G+ ++L +M R+ RPN F L+ G++ + + + ++M G+ V V
Sbjct: 295 VGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVV 354
Query: 255 YNIRIQSLC------------------------------------KLKRSEEAKALLDGM 278
YN + LC K + A + + M
Sbjct: 355 YNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKM 414
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
++ G++PN+ Y ++ K + A +L +M GC P F F LC GG
Sbjct: 415 VNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRV 474
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A++V G +P T L+ GL S++++ EA ELI +++R
Sbjct: 475 LWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEER 522
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +M + G R +V ++L+ G L E ++ + G+ PN YN
Sbjct: 298 VELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLW-RVMVLEGVRPNVVVYN 356
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSI-RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ C SG+ + + M + RPN T + L+ GF K + +V M
Sbjct: 357 TLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVN 416
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
CG+ V VY + LCK ++A L+D M + G P + T+ I G G +
Sbjct: 417 CGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLW 476
Query: 306 AKKLFASMTNGGCEPDS 322
A ++ M GC PD+
Sbjct: 477 AMRVVDQMQRYGCLPDT 493
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 128/329 (38%), Gaps = 13/329 (3%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
F ++D G + P + +++S +S LS +L ++ +R+ R +V
Sbjct: 267 FGLMDEMVGNGVDP----NVVSYSSVISWLSDVGEVELALAVLGKM-----IRRGCRPNV 317
Query: 116 HSIVL----YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H+ Y + + + M G+R +V N LL G S N E +
Sbjct: 318 HTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGR 377
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K PN TY+ ++ F ++GD + +M +RPN + ++ K
Sbjct: 378 MEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNS 437
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++ +++ M G V +N I+ LC R A ++D M G P+ TY
Sbjct: 438 MFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYN 497
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ G L+ A +L + E + + Y G+ E L+V +
Sbjct: 498 ELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVN 557
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELI 380
G P T+ ++ + + KV A + +
Sbjct: 558 GVKPDAITVNVVIYAYSKLGKVRTAIQFL 586
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 113/268 (42%), Gaps = 12/268 (4%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN-- 161
RP++ VH V +A + A + + +M G+R +V +++ +L KN
Sbjct: 385 RPNVTTYSTL-VHGFV---KAGDLQGASEVWNKMVNCGVRPNVVVYTSMVD--VLCKNSM 438
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+++ R+ G P T+N IK C G ++ +M+R P+ +
Sbjct: 439 FDQAYRLIDNM-ATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYN 497
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
LL G + ++ ++ ++++ +E+ + + YN + + E +L ML
Sbjct: 498 ELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVN 557
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG--CEPDSYCFFMFTYFLCQGGEYE 339
G+KP+ T +I+ + K G + A + +T G C PD + +C E
Sbjct: 558 GVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELC-PDIIAHTSLLWGICNSLGIE 616
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGL 367
A+ + KG P+ +T LV G
Sbjct: 617 EAIVYLNKMLNKGIFPNIATWDVLVRGF 644
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 18/197 (9%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM+ ++M +YG N LL G +E + E + +E N TYN V+
Sbjct: 477 AMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEE-RKVELNLVTYNTVM 535
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV---LQMMEKC 246
F G V +L M ++P+A +++ + Y +GKV +Q +++
Sbjct: 536 YGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVI------YAYSKLGKVRTAIQFLDR- 588
Query: 247 GIASG------VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
I +G + + + +C EEA L+ ML++GI PN+ T+ L+ GF K+
Sbjct: 589 -ITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKK 647
Query: 301 GNLEGAKKLFASMTNGG 317
G ++ + G
Sbjct: 648 LGHMGPIRILDDILGKG 664
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 4/242 (1%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
V A NA++ G + + +R+ E P +EP++ TYN +I+ C G +++ ++
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMP----VEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L EM R+ P+ + +LL K Y+ K+L M G + YN+ + +C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
R ++A L + S G +PN +Y ++ G E A++L M GC P+
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
F M FLC+ G E AL+V G P+ + L+ K+ +A + LM
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360
Query: 385 KR 386
R
Sbjct: 361 SR 362
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 131/312 (41%), Gaps = 9/312 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
D MA++ V+ A +A +L+ E+ PD + ++ ++ G +A+
Sbjct: 125 DVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPD------AYTYNTLIRGLCGRGRTANAL 178
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+EM + V LL Y++ ++ E + G P+ TYN V+
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYNVVVNG 237
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G L + PN + ++L G ++ED +++ M + G
Sbjct: 238 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 297
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V +N+ I LC+ E A +L+ + G PN +Y L+H F K+ ++ A
Sbjct: 298 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 357
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + GC PD + LC+ GE + A+++ KG P + +++ GL
Sbjct: 358 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 417
Query: 372 KVAEANELIGLM 383
K EA EL+ M
Sbjct: 418 KTKEALELLNEM 429
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 146/326 (44%), Gaps = 12/326 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + +++ V+ + Q + +E LK P ++IVL G A + A
Sbjct: 227 DIVTYNVVVNGICQEGR---VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 283
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM + G +V N L+ E + + PK YG PNS +YN ++ +
Sbjct: 284 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK-YGCTPNSLSYNPLLHA 342
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ + L M + P+ + LL + + + ++L ++ G A
Sbjct: 343 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 402
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I L K +++EA LL+ M+S+G++P++ TY + G +E +E A + F
Sbjct: 403 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 462
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G P++ + LC+ E +A+ + + G +P+ ST L+ GLA
Sbjct: 463 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 522
Query: 372 KVAEANELI------GLMKKRFPKSG 391
+ EA +L+ G+++K G
Sbjct: 523 LIKEARDLLDELCSRGVVRKSLINKG 548
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 102/217 (47%), Gaps = 7/217 (3%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ YN ++ +C +G + ++AEM + P+A + L+ G + + V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAV 180
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M + V Y I +++ CK ++A LLD M +G P++ TY +++G +
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG ++ A + ++ + GCEP++ + + LC +E A ++ KG P+ T
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNA 396
L++ L V A E++ ++ PK G N+
Sbjct: 301 FNMLISFLCRKGLVEPALEVL----EQIPKYGCTPNS 333
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 10/250 (4%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELK----TRPDLRQNERFHVHSIVLYGQANMI 127
P + + F++ +S L + ++LE++ T L N H + + +
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA-----FCKQKKM 349
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D AM + M G + + N LL S + + + K G P +YN
Sbjct: 350 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL-KDKGCAPVLISYNT 408
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VI ++G + +L EM K ++P+ + + AG +E + ED + ++ G
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 468
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I +YN I LCK + + A L M+ G PN TY LI G EG ++ A+
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 528
Query: 308 KLFASMTNGG 317
L + + G
Sbjct: 529 DLLDELCSRG 538
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 139/313 (44%), Gaps = 6/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A ++ + L E+ + + F + + + + M++ A+Q
Sbjct: 256 DIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML-VRFFCRGGMVERAIQV 314
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M ++G + N +++ I + + F +YG P++ +Y V++ C
Sbjct: 315 LQQMSQHGCTPNTTLCN-IVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC 373
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G +L EM RK+ PN F + ++ E K++++M + G + G+
Sbjct: 374 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV 433
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + C R + A L + + +PN TY L+ G L+ A +L A M
Sbjct: 434 TYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEM 490
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
C ++ F + F CQ G E A+++ M G P+ T +L+ G+
Sbjct: 491 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 550
Query: 374 AEANELI-GLMKK 385
EA EL+ GL+ K
Sbjct: 551 EEALELLHGLVSK 563
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 106/251 (42%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM +EM G ++ N ++ G ++ K I YG +P+ +Y V
Sbjct: 205 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS-YGFQPDIVSYTTV 263
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + V + AEM K PN F +L+ F + E +VLQ M + G
Sbjct: 264 LKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGC 323
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ NI I ++CK R ++A L+ M G P+ +Y ++ G + G E AK+
Sbjct: 324 TPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKE 383
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M C P+ F F LCQ G E A+K+ G T +LV G
Sbjct: 384 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 443
Query: 369 SISKVAEANEL 379
+V A EL
Sbjct: 444 VQGRVDSALEL 454
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 5/303 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L +A + +LL E+ R + NE I + Q +I+ A++
Sbjct: 361 DTISYTTVLRGLCRAGRWEHAKELLPEM-VRKNCPPNEVTFNTFICILCQKGLIEQAIKL 419
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E M +YG + NAL+ G + + +F P EPN+ TY ++ C
Sbjct: 420 IELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP----CEPNTITYTTLLTGLC 475
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +LAEM +K NA F +L++ F ++ E+ +++ M + G +
Sbjct: 476 HAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 535
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N + + K SEEA LL G++S+G+ + TY ++ +E E A ++ ++
Sbjct: 536 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 595
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G P + + LC+ E + A+ ++ G +P+ ST L+ GLA +
Sbjct: 596 QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 655
Query: 374 AEA 376
EA
Sbjct: 656 KEA 658
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 142/324 (43%), Gaps = 10/324 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA--NMIDHAMQT 133
+ +++ + + +++ F +L+E++ + +++++ G +D A +
Sbjct: 188 VTYTVLLEAVCKSSGFGEAMNVLDEMRAK---GCTPNIVTYNVIINGMCREGRVDDAKEI 244
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ YG + + + +L G ++ +++VK +F E + PN T++ +++ FC
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV-PNEVTFDMLVRFFC 303
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G +L +M + PN T +++ K+ + +D L M G
Sbjct: 304 RGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTI 363
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y ++ LC+ R E AK LL M+ + PN T+ I ++G +E A KL M
Sbjct: 364 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 423
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC + + C G ++AL++ + P+ T +L+TGL ++
Sbjct: 424 PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERL 480
Query: 374 AEANELIG-LMKKRFPKSGDMWNA 396
A EL+ +++K P + +N
Sbjct: 481 DAAAELLAEMIQKDCPLNAVTFNV 504
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TY ++++ C+S ++L EMR K PN + +++ G +E + +D
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L + G + Y ++ LC +R ++ K L M+ + PN T+ L+
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F + G +E A ++ M+ GC P++ + +C+ G + A G P
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 357 FSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWN 395
+ +++ GL + A EL+ +++K P + +N
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 401
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%)
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + S+ S + M ++ +P+ + +LL K + + VL M G +
Sbjct: 165 TAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVT 224
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN+ I +C+ R ++AK +L+ + S G +P++ +Y ++ G + K LFA M
Sbjct: 225 YNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMV 284
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
+ C P+ F M F C+GG E A++V + G P+ + ++ + +V
Sbjct: 285 DKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVD 344
Query: 375 EANELIGLM 383
+A + + M
Sbjct: 345 DAYDFLNNM 353
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 37/244 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+ + ++ ++ L A +A ++LL E+ + F+V + + Q ++ AM+
Sbjct: 463 NTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVL-VSFFCQKGFVEEAMEL 521
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G ++ N LL G N EE + G+ ++ TY
Sbjct: 522 VNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS-KGVSLDTITY-------- 572
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
SSV +L+ +E + E+ ++L ++ G+ V
Sbjct: 573 -----SSVVDVLS----------------------REDRTEEAIQMLHAVQDMGMRPKVG 605
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN + +LCK +++A M+S G PN TY LI G EG L+ A+ + + +
Sbjct: 606 MYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 665
Query: 314 TNGG 317
G
Sbjct: 666 YAKG 669
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 128/302 (42%), Gaps = 36/302 (11%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM ++G S A++ L+ G N + + K +G+ P+ YN +I S
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK-FGVAPSLFVYNALINS 364
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G S+ M K + PN + +L+ F K K + L M + GI +
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y+ I CKL + AK+L D M++ G+KPN+ Y LI G+ KEG L A +L+
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQG-----------------------------------G 336
MT G P++Y F LC G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNA 396
A ++ + KG VP T + L++GL S +V+EA E + ++ K +M +
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFS 604
Query: 397 AL 398
AL
Sbjct: 605 AL 606
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 6/260 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D A+ +M + G++ +V ++L+ G C L K K +F E G++PN Y
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK-LRAAKSLFDEMI-ANGLKPNVVIY 463
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I +C+ G+ + + + EM K I PN F L++G ++ + K+ M +
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+ YN+ I+ CK + A LLD M+ +G+ P+ TY+ LI G G +
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++ + + + CF + C+ G + AL CR + +G L+
Sbjct: 584 AREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIY 643
Query: 366 GLASISKVAEANELIGLMKK 385
G I + + +I L+K+
Sbjct: 644 G---ILRQQDRRSIIDLLKQ 660
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN TY +I C+ G + EM + PN + L E E
Sbjct: 700 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 759
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ ++ + +A+ V YNI I+ CKL R +EA +L M+ GI P+ +Y +I+
Sbjct: 760 IQLHDVLLEGFLANTV-TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 818
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ + G+L+ A KL+ SM N G PD+ + Y C GE A ++ M +G P+
Sbjct: 819 YCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 878
Query: 357 FSTMKSLVTGLASISKVA 374
+T SL+ G +S V+
Sbjct: 879 RATYNSLIHGTCLMSSVS 896
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 143/353 (40%), Gaps = 37/353 (10%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+S +S + A L +E+ L+ N + I Y + + +A + + EM
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIAN-GLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
G+ + AL+ G + E ++F E + + + PN TYN +I+ C+ G+
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE-WNVIPNEVTYNVLIEGHCKEGN 545
Query: 198 SSSVYSILAEMRRKSIRP-----------------------------------NATDFGL 222
+ + +L EM K + P N F
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSA 605
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL G+ KE + +D + M G+A + Y++ I + + + LL M +G
Sbjct: 606 LLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
++P+ Y +I K GNL+ A L+ M + GC P+ + LC+ G + A
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAE 725
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+CR +A +P+ +T + L S + +A +L ++ + F + +N
Sbjct: 726 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYN 778
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 140/348 (40%), Gaps = 49/348 (14%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMID--HAM 131
S ++ L + F L +E+ + RPD+ +V++ V+ + D A
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDV------YVYTAVVRSLCELKDFIRAR 235
Query: 132 QTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ M+ G SV N + G C + +E V+ G+ + TY ++
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVE--IKNLLSYKGLRADVGTYCTLVL 293
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ + + ++ EM P+ L+ G K+ ++ ++K G+A
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE------ 304
+ VYN I S+CK + +EA++L + M +G+ PN TY LI F K G L+
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 305 -----------------------------GAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
AK LF M G +P+ + C+
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
GE A ++ KG P+ T +L++GL +++AEAN+L G M
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 1/245 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G+ + L+ +L G I + + +F E G+ P+ Y V++S CE D
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS-GLRPDVYVYTAVVRSLCELKDFIR 233
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ M + + + + G K + + ++ ++ G+ + V Y +
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK++ E + +++ M+ G P+ +L+ G K+GN+ A L + G P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + +C+ G+ + A + KG P+ T L+ K+ A +
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 381 GLMKK 385
G M +
Sbjct: 414 GKMTE 418
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 130/331 (39%), Gaps = 7/331 (2%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
F +LD L P D + +S L + + + +L+ + NE
Sbjct: 550 FELLDEMVEKGLVP----DTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQ-KLNEMCFS 604
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
+ Y + +D A+ EM G+ + + L+ G + ++ + + +
Sbjct: 605 ALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHD- 663
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+ P++ Y +I + ++G+ + + M + PN + L+ G K +
Sbjct: 664 QGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDK 723
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ + M N Y + L E+A L D +L G N TY LI
Sbjct: 724 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIR 782
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GF K G ++ A ++ +M + G PD + Y C+ G+ + A+K+ + + +G P
Sbjct: 783 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 842
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L+ G ++ +A EL M +R
Sbjct: 843 DTVAYNFLIYGCCVTGELTKAFELRDDMMRR 873
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 86/201 (42%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
++ +I+++ ++ ++ M I P +L G + ++ + +
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ V VY ++SLC+LK A+ ++ M S G ++ TY I G K +
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A ++ ++ G D + LC+ E+E ++ + G+VP + + +LV
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327
Query: 365 TGLASISKVAEANELIGLMKK 385
GL + A +L+ +KK
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKK 348
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 113/264 (42%), Gaps = 2/264 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G NM H +EM + G+ + L+ G + N R+F E K GI +
Sbjct: 241 GAGNMY-HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAAS 298
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I C G ++ EM + PN FG +L GF K+ D +
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + + V +YNI I +L + E+A A+ + M +GI PN+ TY LI GF + G
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A L M G E D + + LC GE A+K+ G P+ T
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
+++ G + A E+ M+K
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSI---LAEMRRKSIRPNATDFGLLLAGFYKE 230
K +G+ P+ TYN +I +C+ G + ++Y + L EM I P A FG+L+ G+ K
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+V + M++ GIA+ V YN I LC + EE L++ M G+ PN T+
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 337
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
++ GF K+G + A MT EPD + + + G+ E A+ V A
Sbjct: 338 GCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAK 397
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KG P+ +T L+TG + A+ L+ MK++
Sbjct: 398 KGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ FEEM + G+ SV N+L+ G EE ++ E + G+ PN T+ V+
Sbjct: 283 AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL-GLSPNEITFGCVL 341
Query: 190 KSFCESG---DSSS---------------VYSILAE-----------------MRRKSIR 214
K FC+ G D++ +Y+IL + M +K I
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PN T + L+ GF + + +L M++ GI + V YN+ I +LC +A L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
LD M G++PN TY +I GF +GN++ A ++ M + + +F + CQ
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G+ + A + + K VP+ T +++ G+
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + ++ AM E M K G+ +V N L+ G S ++ + E K G
Sbjct: 376 IDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM-KEKG 434
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
IE + TYN +I + C G+ +L EM + PN + ++ GF + +
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ MEKC + V YN+ I+ C++ + +EA LL+ ML + + PN TY+ + G
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Query: 298 GKEG 301
++G
Sbjct: 555 MEKG 558
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++ ++ S++ + + S LL+E+K + ++V L + + A++ +EM
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE-VRKAVKLLDEM 465
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ GL + N ++ G N + I T K N TYN IK FC+ G
Sbjct: 466 SEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK-RANVVTYNVFIKYFCQIGK 524
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
+L EM K + PN + + G ++ D+
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 149/333 (44%), Gaps = 37/333 (11%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ KLS+A F + L+ +L + ++ E + I YG A A++TF + +G
Sbjct: 142 IEKLSKARAFEPMETLISQLH-KSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFG 200
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
L+ SV + N LL + +K ++ V +F K +GI PN T N ++K+ C+ D +
Sbjct: 201 LQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAA 260
Query: 202 YSILAEM----------------------------RR-------KSIRPNATDFGLLLAG 226
+L EM RR + P+ T + +L+ G
Sbjct: 261 IRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDG 320
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ K+ ++ D KV+ ME+ + Y + I++ CK K+S E LLD ML + P+
Sbjct: 321 YCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPS 380
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+I +EG +E A +L+ + C PD+ ++LC+ G+ A K+
Sbjct: 381 SALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLFD 440
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
KG +P T +L+ G+ ++ EA L
Sbjct: 441 -EFEKGSIPSTLTYNALIAGMCEGGELPEAARL 472
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 37/272 (13%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ N ID A++ EEM G +V +L G + + +R+F E G P+
Sbjct: 253 KKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILD-RGWVPDP 311
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ- 241
TY ++ +C+ G ++ EM + PN +G+++ + KE K +V +L
Sbjct: 312 TTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDD 371
Query: 242 MMEKCGIASGV----------------------------------NVYNIRIQSLCKLKR 267
M+EK I S + + I LCK +
Sbjct: 372 MLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGK 431
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
EA+ L D +G P+ TY LI G + G L A +L+ +M GC P+++ + M
Sbjct: 432 VWEARKLFD-EFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNM 490
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
C+ G ++V + G +P+ +T
Sbjct: 491 LIKGFCKVGNAREGIRVMEEMLDNGCLPNKAT 522
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 113/264 (42%), Gaps = 2/264 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G NM H +EM + G+ + L+ G + N R+F E K GI +
Sbjct: 241 GAGNMY-HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAAS 298
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I C G ++ EM + PN FG +L GF K+ D +
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + + V +YNI I +L + E+A A+ + M +GI PN+ TY LI GF + G
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A L M G E D + + LC GE A+K+ G P+ T
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
+++ G + A E+ M+K
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSI---LAEMRRKSIRPNATDFGLLLAGFYKE 230
K +G+ P+ TYN +I +C+ G + ++Y + L EM I P A FG+L+ G+ K
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+V + M++ GIA+ V YN I LC + EE L++ M G+ PN T+
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 337
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
++ GF K+G + A MT EPD + + + G+ E A+ V A
Sbjct: 338 GCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAK 397
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KG P+ +T L+TG + A+ L+ MK++
Sbjct: 398 KGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ FEEM + G+ SV N+L+ G EE ++ E + G+ PN T+ V+
Sbjct: 283 AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL-GLSPNEITFGCVL 341
Query: 190 KSFCESG---DSSS---------------VYSILAE-----------------MRRKSIR 214
K FC+ G D++ +Y+IL + M +K I
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PN T + L+ GF + + +L M++ GI + V YN+ I +LC +A L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
LD M G++PN TY +I GF +GN++ A ++ M + + +F + CQ
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G+ + A + + K VP+ T +++ G+
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + ++ AM E M K G+ +V N L+ G S ++ + E K G
Sbjct: 376 IDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM-KEKG 434
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
IE + TYN +I + C G+ +L EM + PN + ++ GF + +
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ MEKC + V YN+ I+ C++ + +EA LL+ ML + + PN TY+ + G
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Query: 298 GKEG 301
++G
Sbjct: 555 MEKG 558
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++ ++ S++ + + S LL+E+K + ++V L + + A++ +EM
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE-VRKAVKLLDEM 465
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ GL + N ++ G N + I T K N TYN IK FC+ G
Sbjct: 466 SEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK-RANVVTYNVFIKYFCQIGK 524
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
+L EM K + PN + + G ++ D+
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 12/319 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
LD +F I + +A LL EL+ + + +++ ++ G + I+ A
Sbjct: 161 LDVYSFGIVIKGCCEAGEIEKSFDLLVELR---EFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV--YGIEPNSETYNKV 188
F EM K+GL + L+ G L KN + K+ F + K+ +G+ PN TYN V
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHG--LFKNGIK-KQGFEMYEKMQEHGVFPNLYTYNCV 274
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+ G + + + EMR + + N + L+ G +E K + KV+ M+ I
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVI 334
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I C + + +A +L + SRG+ P+L TY L+ GF ++G+ GA K
Sbjct: 335 NPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAK 394
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGL 367
+ M G +P + + + ETA+++ R+SM + G VP T L+ G
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL-RSSMEELGLVPDVHTYSVLIHGF 453
Query: 368 ASISKVAEANELIGLMKKR 386
++ EA+ L M ++
Sbjct: 454 CIKGQMNEASRLFKSMVEK 472
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM + G+ ++ N L+ G E ++ + K Y I PN TYN +I
Sbjct: 287 AFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSYVINPNLITYNTLI 345
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G S+ +++ + + P+ + +L++GF ++ K+++ ME+ GI
Sbjct: 346 DGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I I + + E A L M G+ P++ TY LIHGF +G + A +L
Sbjct: 406 PSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F SM EP+ + C+ G AL++ R K P+ ++ L+ L
Sbjct: 466 FKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCK 525
Query: 370 ISKVAEANELIGLM 383
K+ EA +L+ M
Sbjct: 526 ERKLKEAEDLVEKM 539
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 128/331 (38%), Gaps = 33/331 (9%)
Query: 89 NHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDA 148
+ F S LL L + R + I Y Q+ +D ++ F EM G +
Sbjct: 72 SQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNC 131
Query: 149 LNALLLGCILSKNYEEVKRIFTE-----------FPKV---------------------- 175
N LL + S ++ + F E F V
Sbjct: 132 FNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELRE 191
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G PN Y +I C+ G+ + EM + + N + +L+ G +K +
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ + M++ G+ + YN + LCK R+++A + D M RG+ N+ TY LI
Sbjct: 252 GFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G +E A K+ M + P+ + C G+ AL +CR ++G P
Sbjct: 312 GLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSP 371
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T LV+G + A +++ M++R
Sbjct: 372 SLVTYNVLVSGFCRKGDTSGAAKMVKEMEER 402
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 36/187 (19%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+ P+ TYN ++ FC GD+S ++ EM + I+P+ + +L+ F +
Sbjct: 365 KSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------- 286
E ++ ME+ G+ V+ Y++ I C + EA L M+ + ++PN
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484
Query: 287 ----------------------------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ +Y +LI KE L+ A+ L M + G
Sbjct: 485 ILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544
Query: 319 EP-DSYC 324
+P D+ C
Sbjct: 545 DPSDTIC 551
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +++ VS + + +++++E++ R ++ ++ + I + +++ ++ A+Q
Sbjct: 374 VTYNVLVSGFCRKGDTSGAAKMVKEMEER-GIKPSKVTYTILIDTFARSDNMETAIQLRS 432
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M++ GL V + L+ G + E R+F + +EPN YN +I +C+
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKM-LEPNEVIYNTMILGYCKE 491
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + +M K + PN + L+ KE K ++ +++ M GI +
Sbjct: 492 GSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTIC 551
Query: 256 NI 257
N+
Sbjct: 552 NL 553
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 139/313 (44%), Gaps = 6/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A ++ + L E+ + + F + + + + M++ A+Q
Sbjct: 245 DIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML-VRFFCRGGMVERAIQV 303
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M ++G + N +++ I + + F +YG P++ +Y V++ C
Sbjct: 304 LQQMSQHGCTPNTTLCN-IVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC 362
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G +L EM RK+ PN F + ++ E K++++M + G + G+
Sbjct: 363 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV 422
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + C R + A L + + +PN TY L+ G L+ A +L A M
Sbjct: 423 TYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGM 479
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
C ++ F + F CQ G E A+++ M G P+ T +L+ G+
Sbjct: 480 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 539
Query: 374 AEANELI-GLMKK 385
EA EL+ GL+ K
Sbjct: 540 EEALELLHGLVSK 552
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 106/251 (42%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM +EM G ++ N ++ G ++ K I YG +P+ +Y V
Sbjct: 194 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS-YGFQPDIVSYTTV 252
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + V + AEM K PN F +L+ F + E +VLQ M + G
Sbjct: 253 LKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGC 312
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ NI I ++CK R ++A L+ M G P+ +Y ++ G + G E AK+
Sbjct: 313 TPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKE 372
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M C P+ F F LCQ G E A+K+ G T +LV G
Sbjct: 373 LLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC 432
Query: 369 SISKVAEANEL 379
+V A EL
Sbjct: 433 VQGRVDSALEL 443
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 4/254 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + G V A N L+ G + +R+ P + P++ TY +I
Sbjct: 93 AARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP----VPPDAYTYTPII 148
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ G ++L +M ++ +P+ + +LL K + + VL M G
Sbjct: 149 RGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT 208
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN+ I +C+ R ++AK +L+ + S G +P++ +Y ++ G + K L
Sbjct: 209 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 268
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
FA M + C P+ F M F C+GG E A++V + G P+ + ++ +
Sbjct: 269 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICK 328
Query: 370 ISKVAEANELIGLM 383
+V +A + + M
Sbjct: 329 QGRVDDAYDFLNNM 342
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 5/303 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L +A + +LL E+ R + NE I + Q +I+ A++
Sbjct: 350 DTISYTTVLRGLCRAGRWEHAKELLPEM-VRKNCPPNEVTFNTFICILCQKGLIEQAIKL 408
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E M +YG + NAL+ G + + +F P EPN+ TY ++ C
Sbjct: 409 IELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP----CEPNTITYTTLLTGLC 464
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +LA M +K NA F +L++ F ++ E+ +++ M + G +
Sbjct: 465 HAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 524
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N + + K SEEA LL G++S+G+ + TY ++ +E E A ++ ++
Sbjct: 525 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 584
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G P + + LC+ E + A+ ++ G +P+ ST L+ GLA +
Sbjct: 585 QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 644
Query: 374 AEA 376
EA
Sbjct: 645 KEA 647
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 1/220 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TY ++++ C+S ++L EMR K PN + +++ G +E + +D
Sbjct: 171 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 230
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L + G + Y ++ LC +R ++ K L M+ + PN T+ L+
Sbjct: 231 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 290
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F + G +E A ++ M+ GC P++ + +C+ G + A G P
Sbjct: 291 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 350
Query: 357 FSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWN 395
+ +++ GL + A EL+ +++K P + +N
Sbjct: 351 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFN 390
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 38/249 (15%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P P + + ++ ++ L A +A ++LL + + F+V + + Q ++
Sbjct: 448 PCEP-NTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVL-VSFFCQKGFVE 505
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM+ +M ++G ++ N LL G N EE + G+ ++ TY
Sbjct: 506 EAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVS-KGVSLDTITY--- 561
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
SSV +L+ +E + E+ ++L ++ G+
Sbjct: 562 ----------SSVVDVLS----------------------REDRTEEAIQMLHAVQDMGM 589
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V +YN + +LCK +++A M+S G PN TY LI G EG L+ A+
Sbjct: 590 RPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARY 649
Query: 309 LFASMTNGG 317
+ + + G
Sbjct: 650 VLSELYAKG 658
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A V + I++LC+ R+ +A +L + G ++ Y L+ G+ + G L+ A
Sbjct: 69 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++L ASM PD+Y + LC G AL + + +G P T L+
Sbjct: 129 RRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185
Query: 367 LASISKVAEANELIGLMKKR 386
+ S EA ++ M+ +
Sbjct: 186 VCKSSGFGEAMNVLDEMRAK 205
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 2/315 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ + L + + + +LL E+ T + +E + Q ++D A++
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEM-TSNNCAPDEVTFNTIVTSLCQQGLVDRAIEV 413
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ M ++G + +++L G ++ + + K YG +P++ Y V+K C
Sbjct: 414 VDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVLKGLC 472
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ ++AEM P+ F ++A ++ + +V++ M + G + +
Sbjct: 473 STEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV 532
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I LC ++A LL + S G KP++ T+ L+ G E A++L A+M
Sbjct: 533 TYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANM 592
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
C PD F LCQ G A++ + G VP+ ST +V L K
Sbjct: 593 MRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKA 652
Query: 374 AEANELIGLMKKRFP 388
A EL+ M P
Sbjct: 653 QAALELLSGMTNGTP 667
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 1/252 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM +EM G + N L+ + +E I + P +G +P++ TY V
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPS-HGCKPDAVTYTPV 362
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+KS C S V +LAEM + P+ F ++ ++ + +V+ M + G
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGC 422
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + Y+ + LC + R ++A LL + S G KP+ Y ++ G E A++
Sbjct: 423 VADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEE 482
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L A M C PD F LCQ G + A++V G P T ++ GL
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542
Query: 369 SISKVAEANELI 380
+ S + +A EL+
Sbjct: 543 NESCIDDAMELL 554
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G +V N ++ G + E+ +R+ P P++ T+N +I++ C G
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP----FPPDTFTFNPLIRALCVRGRIPD 269
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ +M + P+ + +LL KE Y +L M G + YN+ I
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
++C +EA +L + S G KP+ TY ++ + ++L A MT+ C P
Sbjct: 330 AMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP 389
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D F LCQ G + A++V G V T S++ GL + +V +A EL+
Sbjct: 390 DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELL 449
Query: 381 GLMK 384
+K
Sbjct: 450 SRLK 453
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 144/335 (42%), Gaps = 26/335 (7%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQ 123
L + P D + F+ V+ L Q + +++E++ PD+ ++ ++ G
Sbjct: 488 LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV------TYNCIIDGL 541
Query: 124 AN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
N ID AM+ ++ G + + N LL G +E+ +++ + P+
Sbjct: 542 CNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMR-SNCPPD 600
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
T+N VI S C+ G + L M PN++ + +++ K K + ++L
Sbjct: 601 ELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLS 660
Query: 242 MMEKCGIASGVN---VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
G+ +G YN I +L K + EEA LL M+S G+ P+ TY+ L +G
Sbjct: 661 -----GMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVC 715
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+E + A ++ + + G PD+ + C+ + A+ ++ G +P S
Sbjct: 716 REDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDES 775
Query: 359 TMKSLVTGLASISKVAEANEL------IGLMKKRF 387
T L+ LA + EA L +G++ K+
Sbjct: 776 TYVILLEALAYGGLLDEAKRLLASLCSLGVLDKKL 810
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
NI I+ LC R +A+ + + G + TY +++G+ + G +E A++L M
Sbjct: 191 NILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPF 247
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
PD++ F LC G AL V + +G P T L+ S +
Sbjct: 248 ---PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQ 304
Query: 376 ANELIGLMKKR 386
A L+ M+ +
Sbjct: 305 AMALLDEMRAK 315
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 137/282 (48%), Gaps = 9/282 (3%)
Query: 104 RPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
RPD+ +++I++ G + ++ A++ ++ + + S+ N+L+ G ++
Sbjct: 428 RPDVT------LYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRK 481
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
E +R+ E K++G+EP++ TY ++ ++CE G+ + ++ +L EM K I P +
Sbjct: 482 VVEARRLL-ESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYT 540
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+++ G K+ K E+ ++L+ M G+A YN IQ CK K +A LLD ML
Sbjct: 541 VVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIH 600
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
++P TY LI G + G++E A ++ S+ + + C G+ + A
Sbjct: 601 NLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRA 660
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+KV + KG+ +++ L + EA +M
Sbjct: 661 VKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIM 702
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 166/385 (43%), Gaps = 32/385 (8%)
Query: 20 NLATSSLLSAGDEAAALTI-----KEKKRATIARLKSESNPFRILDICCGASLAPESPL- 73
N+ L+ AG AL + K+ + + K + F +L + GA + L
Sbjct: 224 NILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLT 283
Query: 74 ------DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG----- 122
D + +++ + Q + E L+ R DL + F + +++LY
Sbjct: 284 DEGLKPDLVTYTVLICGHCQMGNIE------EALRLRRDLLSSG-FQL-NVILYSVLLSS 335
Query: 123 --QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE--FPKVYGI 178
+ +D A+Q EM+ L+ + + L+ G ++ +++ E F +++
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIF-- 393
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PNS ++ ++K CE G S + ++RP+ T + +++ G+ K E+ +
Sbjct: 394 -PNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVR 452
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ + + I + +N I CK ++ EA+ LL+ + G++P+ TY L++ +
Sbjct: 453 LYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYC 512
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+EGN+ +L M EP + + LC+ + E ++++ AKG P
Sbjct: 513 EEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQI 572
Query: 359 TMKSLVTGLASISKVAEANELIGLM 383
T +++ + +A EL+ M
Sbjct: 573 TYNTIIQCFCKAKDMRKAFELLDDM 597
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 140/319 (43%), Gaps = 12/319 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYG--QANMI 127
L+ + +S+ +S L + + QLL E++ +PDL +SI+++G + +
Sbjct: 324 LNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLV------TYSILIHGLCKQGKV 377
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A+Q ++EM + + A + +L G + K R++ + + + P+ YN
Sbjct: 378 QQAIQLYKEMCFNRIFPNSFAHSGILKG-LCEKGMLSDARMYFDSLIMSNLRPDVTLYNI 436
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I + + GD + +R K+I P+ F L+ GF K K + ++L+ ++ G
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y + + C+ + LL M + I+P + TY +I G K+ LE +
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L M G PD + C+ + A ++ + P +T L+ GL
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616
Query: 368 ASISKVAEANELIGLMKKR 386
V +A+ ++ ++ R
Sbjct: 617 CRYGDVEDADRVLVSLQDR 635
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 100/236 (42%), Gaps = 2/236 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + I+ + EM+ + +V ++ G + EE ++ + + G+ P
Sbjct: 511 YCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM-RAKGLAP 569
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I+ FC++ D + +L +M ++ P + +L+ G + ED +VL
Sbjct: 570 DQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVL 629
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++ I Y I++ C ++ A + M+ +G + ++ Y +I+ K
Sbjct: 630 VSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKR 689
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ AK F M + G PD F M + G + ++ A M K + H
Sbjct: 690 CLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL-AVMIKFGLLH 744
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 4/227 (1%)
Query: 98 LEELKTRPDLRQNERFHV-HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLL 154
L EL +L+ E V +++V+ G + ++ ++Q E+M GL N ++
Sbjct: 520 LHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQ 579
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
+K+ + + + ++ +EP TYN +I C GD +L ++ ++I
Sbjct: 580 CFCKAKDMRKAFELLDDML-IHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNIN 638
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
+ ++ + + KV M + G + Y+ I LCK EAK
Sbjct: 639 LTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYY 698
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
MLS G+ P+ + ++ +++ F + G++ +L A M G D
Sbjct: 699 FCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ +TYN ++ + + VY+ +++ +A +++ G + ++ D
Sbjct: 114 LRPSIQTYNSLLYNLRHTDIMWDVYN---DIKDSGTPQSARTSSIIVDGLCGQSRFRDAV 170
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
L+ + A V +N + CKL ++ AK+ ML GI P+ +Y LIHG
Sbjct: 171 LFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGL 230
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK------VCRASMAK 351
G++E A +L M G +PD M TY + G + L + + +
Sbjct: 231 IVAGSMEEALELTNDMEKQGLQPD-----MVTYKIVAKGFHLLGLMSGAREIIQKMLTDE 285
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
G P T L+ G + + EA L ++ SG N L
Sbjct: 286 GLKPDLVTYTVLICGHCQMGNIEEALRL----RRDLLSSGFQLNVIL 328
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 5/239 (2%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
Q ++EL RP R + + L+ + + A + EM GL V ++
Sbjct: 254 QKMKELGWRPTTRA----YAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNA 309
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
R+F E + G EPN TYN +++ FC +G ++L +MR + P
Sbjct: 310 YCREGRMSGAVRVF-ESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEP 368
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + LL+ G + ++L++ME G+A+ YN+ I +LCK + +EA +L
Sbjct: 369 DVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
DG+ RGI+PN T+ +I+G K G + A +M + G PD+Y + F LC+
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCK 487
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 124/305 (40%), Gaps = 20/305 (6%)
Query: 97 LLEELKTRPDLRQNER--------------FHVHSIVL-YGQANMIDHAMQTFEEMDKYG 141
L+ L R DLR +R F +S++L Y + ++ A F +M G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRG 194
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
Q + AL+ G + +E +F E +P+ T+ ++K C++G
Sbjct: 195 FSQDAVSYAALIEGFCEAGRIDEALELFREM-----TQPDMYTHAALVKGLCDAGRGEEG 249
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+L +M+ RP + L+ + +E K E+ K+L M G+ V I + +
Sbjct: 250 LCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNA 309
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
C+ R A + + M +G +PN+ TY ++ GF G + A L M G EPD
Sbjct: 310 YCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPD 369
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + C G +A ++ R G T L+ L KV EA L
Sbjct: 370 VVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429
Query: 382 LMKKR 386
++ R
Sbjct: 430 GLEYR 434
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 13/269 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ A + AM ++M + G+ V N L+ G + + R+ + G+
Sbjct: 345 FCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLL-RLMEGNGLAA 403
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I + C++G S+ + + IRPN+ F ++ G K K++ L
Sbjct: 404 DQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFL 463
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M G A Y+ I++LCK K S+E +D ML + +KP+ Y +I+ E
Sbjct: 464 ENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNE 523
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE------TALKVCRASMAKGWV 354
N A +++ M + GC PD + C G + T +K CR +
Sbjct: 524 RNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRT------I 577
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLM 383
+L+ G SI + A ++ M
Sbjct: 578 VDAMAYNTLIDGHTSIGQTDRAVTILKHM 606
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 32/258 (12%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++I +++L ++ +++ ++ ++ PD+ + S+ Y +D A
Sbjct: 513 YTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVT----YTTSVRAYCNEGRLDEAENVV 568
Query: 135 EEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIE--PNSETY----- 185
EM K R VDA+ N L+ G + + R T + G+ PN T+
Sbjct: 569 TEMKK--CRTIVDAMAYNTLIDG---HTSIGQTDRAVTILKHMTGVASMPNHFTFFILLR 623
Query: 186 ---------NKVIK--SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ +K S ++ + + V+ + M++ S+ +A + +L GF +E + +
Sbjct: 624 HLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLD 683
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+V ++ +M++ + ++YN + CKL+ +A ALL M+ G PNL Y++L+
Sbjct: 684 EVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLL 743
Query: 295 HGFGKEGNLEGAKKLFAS 312
G EG + AK++F S
Sbjct: 744 SGLTAEGQADRAKEIFRS 761
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 97/250 (38%), Gaps = 31/250 (12%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R+F + P TYN +I++ C D L+ M R RP+A F L+ G
Sbjct: 114 RLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILG 173
Query: 227 FYKEHKYE-----------------------------DVGKVLQMMEKCGIASGVNVYN- 256
+ + + E + G++ + +E + ++Y
Sbjct: 174 YCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTH 233
Query: 257 -IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
++ LC R EE +L M G +P Y L+ + +E E A+K+ M +
Sbjct: 234 AALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFD 293
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P + C+ G A++V + KG P+ T ++V G + KV +
Sbjct: 294 SGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYK 353
Query: 376 ANELIGLMKK 385
A L+ M++
Sbjct: 354 AMALLDQMRE 363
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 137/309 (44%), Gaps = 6/309 (1%)
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDAL 149
+A++ LL+E++ R ++I++ G +A I ++EM + + V
Sbjct: 200 DAVAGLLKEMENR---GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFY 256
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
+A++ N +F E +G+EPN TY +I FC+ G + +LA+M+
Sbjct: 257 SAVINAYCRGGNVRRASEVFDECVG-HGVEPNERTYGALINGFCKIGQIEAAEMLLADMQ 315
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ + N F ++ G+ + E ++ +MEK GI + YN LC++ R E
Sbjct: 316 LRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRME 375
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+AK LL M +G+ PN +Y LI KEG++ A++LF M G P + +
Sbjct: 376 DAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMI 435
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+ G A + + KG VP T LV G KV A L MK R K
Sbjct: 436 DGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTK 495
Query: 390 SGDMWNAAL 398
+ AL
Sbjct: 496 PNVVAYTAL 504
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 2/302 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++I V LS+A + + + +E+K R ++ + F+ I Y + + A + F+E
Sbjct: 221 YTILVDGLSRAGDISKVEAVYDEMK-RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDEC 279
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+G+ + AL+ G E + + + ++ G+ N +N +I +C G
Sbjct: 280 VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADM-QLRGVGHNQIVFNTMIDGYCRHGM 338
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
I A M + I + + L G + ++ ED K+L +M + G+A Y
Sbjct: 339 VEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTT 398
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I K EA+ L M +G +P++ TY +I G+ K G++ A++ M G
Sbjct: 399 LISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKG 458
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
PD Y + + C G+ + AL++ +G P+ +LV+GLA + EA
Sbjct: 459 LVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAF 518
Query: 378 EL 379
+L
Sbjct: 519 QL 520
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 6/272 (2%)
Query: 58 ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
+ D C G + P + + ++ + A LL +++ R + N+
Sbjct: 275 VFDECVGHGVEP----NERTYGALINGFCKIGQIEAAEMLLADMQLR-GVGHNQIVFNTM 329
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I Y + M++ A++ M+K G+ + N L G E+ K++ + G
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE-KG 388
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN +Y +I + GD + +M K RP+ + +++ G+ K +
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ + MEK G+ + Y + C + + A L + M RG KPN+ Y L+ G
Sbjct: 449 RFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGL 508
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
KEG E A +L+ M G PD + +
Sbjct: 509 AKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 146/329 (44%), Gaps = 14/329 (4%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQ 123
L+ S ++ +I V + F + ++ E++ R PD+ H++++ +
Sbjct: 151 LSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV------THNVMVDAR 204
Query: 124 --ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
A ++ AM + M G++ + N++L G + + +++ + +F G+ P+
Sbjct: 205 FRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM-DACGVAPD 263
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
++N +I FC +G+ EMR + + P+ F L+ F + + + + L+
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + G+ +Y + I C+ EA + D M++ G P++ TY L++G KE
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
L A++L M G PD F + C+ G E AL+ + P T
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443
Query: 362 SLVTGLASISKVAEANELIGLMKKR--FP 388
+L+ G+ + +ANEL M R FP
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFP 472
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 120/285 (42%), Gaps = 8/285 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ ++ L + + +LL E+K R PDL +H Y + I+ A
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTL-IHG---YCRDGNIEKA 423
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+Q F+ + LR + N L+ G + + ++ + I PN TY+ +I
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM-HSREIFPNHVTYSILID 482
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
S CE G + ++ L EM K I PN + ++ G+ + + L M +
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN I K + EA LL M + ++P+ TY +I GF GN++ A ++
Sbjct: 543 DLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVY 602
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
M G EPD Y + G + + ++ + KG P
Sbjct: 603 KKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 115/291 (39%), Gaps = 34/291 (11%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PKV------ 175
D A + F MD G+ V + N L+ G + EE R + E P V
Sbjct: 246 DKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCL 305
Query: 176 ----------------------YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
+G+ P+ Y VI FC +G + EM
Sbjct: 306 IGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGC 365
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
P+ + LL G KE + D ++L M++ G+ + + I C+ E+A
Sbjct: 366 LPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQ 425
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
D + + ++P++ TY LI G ++G+L A +L+ M + P+ + + C
Sbjct: 426 FFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHC 485
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ G+ + A + KG VP+ T S++ G V++ + + M+
Sbjct: 486 EKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMR 536
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 136/318 (42%), Gaps = 12/318 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYG--QANMID 128
D ++FS + ++ + ++ L E++ PD ++++V+ G +A ++
Sbjct: 298 DVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPD------GVIYTMVIGGFCRAGLML 351
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ +EM +G V N LL G + + + + E K G+ P+ T+ +
Sbjct: 352 EALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM-KERGVPPDLCTFTTL 410
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C G+ + + +RP+ + L+ G ++ ++ M I
Sbjct: 411 IHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREI 470
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y+I I S C+ + + A A LD M+++GI PN+ TY +I G+ + GN+ ++
Sbjct: 471 FPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQ 530
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M + PD + + + G+ A + + + P T +++G +
Sbjct: 531 FLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFS 590
Query: 369 SISKVAEANELIGLMKKR 386
+ EA+ + M R
Sbjct: 591 VHGNMQEADWVYKKMGAR 608
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 1/240 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + EM + G+ + L+ G N E+ + F + P+ TYN
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISD-QRLRPDIVTYN 443
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C GD + +M + I PN + +L+ ++ + ++ L M
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + YN I+ C+ + + L M + P+L TY LIHG+ KEG + A
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M N +PD+ + M G + A V + A+G P T S++ G
Sbjct: 564 FNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMING 623
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 150/318 (47%), Gaps = 4/318 (1%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P+ LD + +SK H I ++ L+ RP+L ++++V ++ +
Sbjct: 137 PKPLLDTSLAAYVISKQPHLGH--QIFNKMKRLRFRPNLLTCNTL-LNALVRSNSSHSLV 193
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+ + F++ K G++ +V+ N L+ G N EE R+ + + YG P++ TYN V
Sbjct: 194 FSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGE-YGCCPDNVTYNTV 252
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + C+ + V +L +M+ + PN + +L+ G+ K ++ +V+++M G+
Sbjct: 253 LTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGM 312
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V YN ++ LC + +EA L D M S + P++ TY LI G + + A K
Sbjct: 313 LPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFK 372
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M G + + + + C G+ + A V + G+ P T +++ G
Sbjct: 373 LVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYC 432
Query: 369 SISKVAEANELIGLMKKR 386
K+AEA +++ M ++
Sbjct: 433 KAGKMAEAYKMMDEMGRK 450
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 137/295 (46%), Gaps = 2/295 (0%)
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNA 151
+A +L+EE+K R +++N H I + ID A +M + G N
Sbjct: 368 DAAFKLVEEMKAR-GVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNT 426
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
++ G + E ++ E + G++ ++ T N ++ + C Y++ + R++
Sbjct: 427 MINGYCKAGKMAEAYKMMDEMGR-KGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKR 485
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ +G L+ G++K+ + + K+ + M++ GI + + YN I+ LC ++++A
Sbjct: 486 GYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQA 545
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L+ +L +G+ P+ T +IHG+ EG +E A + M +PD + +
Sbjct: 546 VDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRG 605
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ G E L + ++KG T +++ ++ +A +L+ M+ +
Sbjct: 606 LCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGK 660
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 14/278 (5%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVY 176
I+ Y + D A++ +EEM + G+ ++ N ++ G C+ K + V ++ K
Sbjct: 498 IMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEK-- 555
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ T N +I +C G + +M S++P+ +LL G +E E
Sbjct: 556 GLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKG 615
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ G YNI I S CK +R E+A L+ M + ++P+ TY ++ G
Sbjct: 616 LTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTG 675
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSY--------CFFMFT---YFLCQGGEYETALKVC 345
K G E A+KL G + + M++ LC G+Y+ A+K+
Sbjct: 676 LTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLF 735
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + KG + T L+ GL K L+ M
Sbjct: 736 QQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFM 773
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 111/251 (44%), Gaps = 3/251 (1%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M GL + + N L+ G K +E + E G+ P+ TYN +++ C+
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVI-ELMTGKGMLPDVWTYNTMVRGLCDE 329
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG-KVLQMMEKCGIASGVNV 254
G + +M + P+ + L+ G + EH+ D K+++ M+ G+
Sbjct: 330 GKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCF-EHRGSDAAFKLVEEMKARGVKENGVT 388
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+NI I+ C + +EA ++ M+ G P+ TY +I+G+ K G + A K+ M
Sbjct: 389 HNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMG 448
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G + D++ + +C + + A + + +G++ T +L+ G +
Sbjct: 449 RKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQAD 508
Query: 375 EANELIGLMKK 385
A +L MK+
Sbjct: 509 RALKLWEEMKE 519
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
L++G + + +++ E K GI TYN +I+ C SG + L E+
Sbjct: 496 TLIMGYFKDEQADRALKLWEEM-KETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLE 554
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
K + P+ + +++ G+ E E + M + + + NI ++ LC+ E+
Sbjct: 555 KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEK 614
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
L + +S+G + TY +I F KE LE A L M EPD Y +
Sbjct: 615 GLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVT 674
Query: 331 FLCQGGEYETALKVCRASMAKG 352
L + G E A K+ KG
Sbjct: 675 GLTKAGRTEEAEKLALKFAEKG 696
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 117 SIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+I+++G ++ A Q +M ++ L+ + N LL G E+ +F +
Sbjct: 565 NIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWIS 624
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G ++ TYN +I SFC+ + ++ EM K++ P+ + ++ G K + E
Sbjct: 625 -KGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTE 683
Query: 235 DVGKV-LQMMEKCG----------IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ K+ L+ EK + + +Y+ +I SLC + ++A L +G+
Sbjct: 684 EAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGV 743
Query: 284 KPNLDTYKHLIHGFGK 299
N TY L+ G K
Sbjct: 744 SLNKYTYIKLMDGLLK 759
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 2/288 (0%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
Q+ E +K R + N + I Y M+D A + F EM + G+ V N L+ G
Sbjct: 249 QMYENMK-RSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
K + E ++ + KV G+ PN TYN +I FC+ S + +++ + P
Sbjct: 308 LCRGKKFGEAVKLVHKVNKV-GLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSP 366
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ L+AG+ K +++ ME+ IA Y I I + +L +E+A +
Sbjct: 367 TLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMH 426
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M G+ P++ TY L+HG GN++ A KLF S+ +P+S + + C+
Sbjct: 427 SLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKE 486
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G AL++ + G VP+ ++ S + L K EA L+G M
Sbjct: 487 GSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQM 534
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 12/312 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNA---ISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMI 127
LD +F I + +A +F + +LEE P++ +++ ++ G + +
Sbjct: 156 LDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVV------IYTTLIDGCCKDGNV 209
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A F +M++ GL + + L+ G E +++ E K GI PN+ YN
Sbjct: 210 MLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY-ENMKRSGIVPNAYAYNC 268
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I +C G + + AEMR K I + +L+ G + K+ + K++ + K G
Sbjct: 269 LISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
++ + YNI I C +++ + A L + + S G+ P L TY LI G+ K NL GA
Sbjct: 329 LSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGAL 388
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M P + + + E A ++ G VP T L+ GL
Sbjct: 389 DLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGL 448
Query: 368 ASISKVAEANEL 379
+ EA++L
Sbjct: 449 CVHGNMKEASKL 460
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 122/300 (40%), Gaps = 41/300 (13%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDA--LNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
++N D A F E+ + +DA ++ GC + + + R+ + +G+ P
Sbjct: 136 RSNYFDKAWWIFNELKS---KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEE-FGLSP 191
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE-------HKY 233
N Y +I C+ G+ ++ +M R + PN + +L+ GF+K+ Y
Sbjct: 192 NVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY 251
Query: 234 EDVG----------------------------KVLQMMEKCGIASGVNVYNIRIQSLCKL 265
E++ KV M + GIA GV YNI I LC+
Sbjct: 252 ENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
K+ EA L+ + G+ PN+ TY LI+GF ++ A +LF + + G P +
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTY 371
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ AL + + + P T L+ A ++ +A E+ LM+K
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEK 431
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N + A + M+K GL V + LL G + N +E ++F +++ ++P
Sbjct: 413 FARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMH-LQP 471
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
NS YN +I +C+ G S +L EM + + PN F + ++ K+++ +L
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLL 531
Query: 241 QMMEKCGIASGVNVYNI 257
M G+ V++Y +
Sbjct: 532 GQMINSGLKPSVSLYKM 548
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 6/264 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ I A F+ M K+G + NALL G + + ++ K G P+
Sbjct: 62 RASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKA-GYSPDV 120
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++ FC+ G I ++ P+ + L+ GF K K ++ ++LQ
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE-G 301
M + V YN + LCK R +EA+ L+ + +G PN+ TY LI G +E
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELR 237
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
LE A++L M GC+PD + + L + ALK+ + + +G+ P T
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297
Query: 362 SLVTGLASISKVAEANELI-GLMK 384
L+ GL +V EA EL GL+K
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVK 321
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 147/320 (45%), Gaps = 16/320 (5%)
Query: 76 MAFSIAVSKLS-QANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQA--NMIDH 129
+ +S +S L + + QLLE++ +PD+ ++ +++G A +
Sbjct: 223 ITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVS------YNALIHGLAREQGVSE 276
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F + + G V N L+ G + E +F+ K +G+EP++ TY I
Sbjct: 277 ALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK-HGLEPDAITYTVFI 335
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C++G +L +M K P+ ++ G KE + ++ +L ME G +
Sbjct: 336 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK---EGNLEGA 306
+N I C+ + ++A ML RG+KP + TY L+ G K EG ++ A
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF +M G PD + L + G+ + A ++ A AKG +P+ T SL++G
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515
Query: 367 LASISKVAEANELIGLMKKR 386
L + KV EA EL M ++
Sbjct: 516 LCGLDKVDEALELFVAMVEK 535
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 152/338 (44%), Gaps = 9/338 (2%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
+AR + S ++ PE P ++I + L + + N +L L +
Sbjct: 268 LAREQGVSEALKLFGSVLRQGYEPEVP----TYNILIDGLLKEDRVNEAFELFSGL-VKH 322
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
L + + I +A ++ A+ ++MD+ G V + NA++ G K +E
Sbjct: 323 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 382
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ + + + G PN+ ++N +I C +G + EM ++ ++P + +L+
Sbjct: 383 EVLLSGM-EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVD 441
Query: 226 GFYK---EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
G K E + ++ + M + G V Y+ I L K + ++A+ LL M ++G
Sbjct: 442 GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 501
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
PN+ TY LI G ++ A +LF +M GC PD+ + LC+ + AL
Sbjct: 502 CIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKAL 561
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ S+ G VP SL+ GL ++++V EA +L+
Sbjct: 562 ALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+A G+LL K K E + ++ + G+ ++ +NI I LC+ R +A+ +
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCD-ISTFNIYISGLCRASRIGDAQTV 72
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
DGM G PN TY L+ G G + A+ L+ M G PD + + C+
Sbjct: 73 FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G+ + ALK+ ++ +G+VP T +L+ G K+ EA ++ M
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
++ + ++Y P++ T +++S +SG + + ++ K + +T F + ++G
Sbjct: 4 VYDKLVRIY--SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIST-FNIYISGL 60
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ + D V M K G YN + LC R +A+AL + M+ G P++
Sbjct: 61 CRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDV 120
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY L+HGF K G L+ A K+F G PD + C+ + + A ++ +
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 180
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+++ VP T SLV GL +V EA LI
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI 213
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 5/217 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ +YN +I S + + R+ P + +L+ G KE + +
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + K G+ Y + I LCK R E+A +L M +G P++ ++ +I+G
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVING 372
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KE ++ A+ L + M GC P++ F C+ G+++ A+ + + +G P
Sbjct: 373 LCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPT 432
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM-----KKRFP 388
T LV GL + E I L K R P
Sbjct: 433 VVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 469
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAM 131
+ + F+ + + + A EE++ R L+ N ++ ++ G +N +D A+
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQ-RQGLKPN--IVTYNSLINGLSNNGKLDEAI 328
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+++M GL+ ++ NAL+ G K +E +++F + + + PN+ T+N +I +
Sbjct: 329 ALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAE-QDLVPNAITFNTMIDA 387
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC++G +++ M + I PN + + L+AG + K+L ME + +
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKAD 447
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YNI I CK +A+ LL ML+ G+KPN TY L+ G+ EGNL+ A K+
Sbjct: 448 VVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRT 507
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
M G + + + C+ G+ E A ++ + KG P+ +T
Sbjct: 508 QMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTT 555
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%), Gaps = 4/255 (1%)
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++EM K ++ ++ N + G + + + + + K +G PN TYN +I
Sbjct: 187 VYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDI-KAWGFSPNIVTYNTLIDGH 245
Query: 193 CESGDSSSVY---SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G + +Y +IL EM I PN F L+ GF K+ + M++ G+
Sbjct: 246 CKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLK 305
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I L + +EA AL D M+ G+KPN+ T+ LI+GF K+ ++ A+KL
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKL 365
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F + P++ F C+ G E + + + +G P+ ST L+ GL
Sbjct: 366 FDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCR 425
Query: 370 ISKVAEANELIGLMK 384
V A +L+ M+
Sbjct: 426 NQNVRAAKKLLNEME 440
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 3/255 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A FEEM + GL+ ++ N+L+ G + +E ++ + + G++PN T+N +I
Sbjct: 292 AKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGL-GLKPNIVTFNALI 350
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ + ++ + + PNA F ++ F K E+ + M GI
Sbjct: 351 NGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V+ YN I LC+ + AK LL+ M + +K ++ TY LI G+ K+G A+KL
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLA 368
M N G +P+ + C G + ALKV R M K G + T L+ G
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKV-RTQMEKEGKRANVVTYNVLIKGFC 529
Query: 369 SISKVAEANELIGLM 383
K+ +AN L+ M
Sbjct: 530 KTGKLEDANRLLNEM 544
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A M++ M G+ +V N L+ G ++N K++ E Y ++
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMEN-YELKA 446
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I +C+ G+ S +L EM ++PN + L+ G+ E + KV
Sbjct: 447 DVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVR 506
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
MEK G + V YN+ I+ CK + E+A LL+ ML +G+ PN TY
Sbjct: 507 TQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
YG + + + N ++ + + ++ + + EM ++ I+PN T F + + G K K
Sbjct: 159 YGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNK 218
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCK---LKRSEEAKALLDGMLSRGIKPNLDTYKH 292
V++ ++ G + + YN I CK + A A+L ML+ I PN T+
Sbjct: 219 AEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNT 278
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI GF K+ N+ AK F M G +P+ + L G+ + A+ + + G
Sbjct: 279 LIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLG 338
Query: 353 WVPHFSTMKSLVTGLASISKVAEANEL 379
P+ T +L+ G + EA +L
Sbjct: 339 LKPNIVTFNALINGFCKKKMIKEARKL 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM+ Y L+ V N L+ G + +++ E V G++PN TYN ++
Sbjct: 432 AKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNV-GVKPNHVTYNTLM 490
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C G+ + + +M ++ R N + +L+ GF K K ED ++L M + G+
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLN 550
Query: 250 SGVNVYN-IRIQSLCK 264
Y+ +R++ L K
Sbjct: 551 PNRTTYDVVRLEMLEK 566
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 22/245 (8%)
Query: 163 EEVKRIFT----EFPKVYGIE---------PNSETYNKVIKSFCES---GDSSSVYSILA 206
E V R F EF YG+E NS+ Y+KV +SF + + +V S+
Sbjct: 59 ELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKV-RSFLDKLVKNEKHTVSSVFH 117
Query: 207 EMRRKSIRP--NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+ RP NA +L+ + + +V + ++ G +N N + +L K
Sbjct: 118 SLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVK 177
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ E + + M+ R I+PNL T+ I+G K G L A+ + + G P+
Sbjct: 178 GNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVT 237
Query: 325 FFMFTYFLCQ---GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ C+ G+ A + + +A P+ T +L+ G V A
Sbjct: 238 YNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFE 297
Query: 382 LMKKR 386
M+++
Sbjct: 298 EMQRQ 302
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 157/338 (46%), Gaps = 20/338 (5%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEEL--KTRPDLRQNERF 113
F+ DI G P +A+ + L + S+++ E+ K+ PD
Sbjct: 100 FKFSDIAVGDGSLPHV----LAYKTMLDCLIKTGKTREASEVVGEMIKKSVPDGMT---- 151
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+ I + + N D AM+ F+ M + + +VD +LL ++ + R+F E
Sbjct: 152 YTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMI 211
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF-----GLLLAGFY 228
+ G P++ TY +++ C G S Y I + MR + P+ + G +AG
Sbjct: 212 Q-RGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRI 270
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
E K + K + EK + +G+ YN+ I+ LC+ + EEA + GM+ +G P L
Sbjct: 271 TEAKV--LFKEVLEGEKAQLDAGI--YNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQ 326
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY LI GF K ++ A +LF +M G P++ + F LC+ G+ A + + S
Sbjct: 327 TYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQS 386
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +G VP T +L+ GL +++ EA+ L M +R
Sbjct: 387 VERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGER 424
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 128/296 (43%), Gaps = 38/296 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ + F+E++ G+ + A NA+L + S +++ + F++ G P+ Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFK-FSDIAVGDGSLPHVLAYK 119
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ ++G + ++ EM +KS+ P+ + L++ K ++ +D KV +M +
Sbjct: 120 TMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEK 178
Query: 247 GIASGVNVYN-----------------------------------IRIQSLCKLKRSEEA 271
I V+VY + ++ LC RS A
Sbjct: 179 EIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLA 238
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG-GCEPDSYCFFMFTY 330
+ M SRG P+ +TY LI+G G + AK LF + G + D+ + +
Sbjct: 239 YDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIE 298
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + E AL+V + KG +P T +L+ G ++V +A +L M+++
Sbjct: 299 GLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEK 354
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%)
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
+L+ GC ++ E K +F E + + ++ YN +I+ C + + A M
Sbjct: 259 SLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVD 318
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
K P + L+ GF+K ++ + ++ + ME+ G + +Y+ I LCK+ + E
Sbjct: 319 KGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINE 378
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
A + RG P+ TY LI G ++ A +L+ M G
Sbjct: 379 AHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERG 425
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 1/210 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ ++YN +++ + ++L+ M + P+ GLL+ F + + +V
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ Q +E G+A G+ YN +++L + D + G P++ YK ++
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G A ++ M PD + LC+ + A+KV + K VP+
Sbjct: 125 LIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPN 183
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
SL+ K+ A L M +R
Sbjct: 184 VDVYTSLLAAHCRTRKLDGAYRLFVEMIQR 213
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M+E G+ + YN+ ++ L KL ++A+A+L M+ G P++ T L+ F +
Sbjct: 1 MLED-GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMK 59
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ +LF + + G + L G+++ K ++ G +PH K
Sbjct: 60 RVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYK 119
Query: 362 SLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+++ L K EA+E++G M K+ G + A +
Sbjct: 120 TMLDCLIKTGKTREASEVVGEMIKKSVPDGMTYTALI 156
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 4/239 (1%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A NA++ G + + +R+ E P +EP++ TYN +I+ C G +++ ++L E
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMP----VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M R+ P+ + +LL K Y+ K+L M G + YN+ + +C+ R
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
++A L + S G +PN +Y ++ G E A++L M GC P+ F M
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
FLC+ G E AL+V G P+ + L+ K+ +A + LM R
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 236
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV--LYGQANMIDHAMQT 133
MA++ V+ A +A +L+ E+ PD + ++++ L G+ +A+
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMPVEPD-----AYTYNTLIRGLCGRGRTA-NALAV 54
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM + V LL Y++ ++ E + G P+ TYN V+ C
Sbjct: 55 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYNVVVNGIC 113
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G L + PN + ++L G ++ED +++ M + G V
Sbjct: 114 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 173
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N+ I LC+ E A +L+ + G PN +Y L+H F K+ ++ A M
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ GC PD + LC+ GE + A+++ KG P + +++ GL K
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 293
Query: 374 AEANELIGLM 383
EA EL+ M
Sbjct: 294 KEALELLNEM 303
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 6/315 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + +++ V+ + Q + +E LK P ++IVL G A + A
Sbjct: 101 DIVTYNVVVNGICQEGR---VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 157
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM + G +V N L+ E + + PK YG PNS +YN ++ +
Sbjct: 158 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK-YGCTPNSLSYNPLLHA 216
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ + L M + P+ + LL + + + ++L ++ G A
Sbjct: 217 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 276
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I L K +++EA LL+ M+S+G++P++ TY + G +E +E A + F
Sbjct: 277 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 336
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G P++ + LC+ E +A+ + + G +P+ ST L+ GLA
Sbjct: 337 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 396
Query: 372 KVAEANELIGLMKKR 386
+ EA +L+ + R
Sbjct: 397 LIKEARDLLDELCSR 411
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 146/323 (45%), Gaps = 11/323 (3%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQN-ERFHVHSIV-----LYGQANMIDHAMQTFE 135
+S+L A H ++ L +L R L R + S+V L ++D A++
Sbjct: 99 LSRLLGAGHRPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDDAVRALA 158
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+ + + + N +LL ++ V+R+F P PN T+N VI C+
Sbjct: 159 RVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV-----PNVFTFNIVIDFLCKE 213
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G+ ++ M+ P+ + L+ G+ K E+V +++ M K G A+ V Y
Sbjct: 214 GELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTY 273
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I K R E+A + M +G+ N+ T+ + F KEG ++ A KLFA M
Sbjct: 274 NALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRV 333
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P+ + + C+ G + A+ + + +G VP+ T +V GL KVAE
Sbjct: 334 RGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAE 393
Query: 376 ANELIGLMKKRFPKSGDMWNAAL 398
A+ ++ LM++ K+ ++ L
Sbjct: 394 ADNVLSLMERGGVKANELLYTTL 416
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 106/247 (42%), Gaps = 1/247 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M G V N+L+ G + EEV+++ +E K G + TYN +I F
Sbjct: 223 FVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRK-SGCAADVVTYNALINCFS 281
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G YS EM+R+ + N F + F KE ++ K+ M G+
Sbjct: 282 KFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEF 341
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + CK R ++A LLD M+ +G+ PN+ TY ++ G KEG + A + + M
Sbjct: 342 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLM 401
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GG + + + + E AL + KG S +L+ GL KV
Sbjct: 402 ERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKV 461
Query: 374 AEANELI 380
EA L+
Sbjct: 462 DEAKSLL 468
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A F EM + G+ +V + + +E ++F + +V G+ PN TY
Sbjct: 286 MEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM-RVRGMMPNEFTYT 344
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G +L EM + + PN + +++ G KE K + VL +ME+
Sbjct: 345 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG 404
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + +Y I SE A LL+ M ++G++ ++ Y LI G K+ ++ A
Sbjct: 405 GVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEA 464
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K L M G P++ + L + G+ A+ + + G+ P+ T +L+ G
Sbjct: 465 KSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDG 524
Query: 367 LASISKVAEA 376
L ++EA
Sbjct: 525 LCKAGSISEA 534
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 5/262 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP--KVYGI 178
YG+ ++ Q EM K G V NAL+ C + +++ ++ F K G+
Sbjct: 245 YGKCGDLEEVEQLVSEMRKSGCAADVVTYNALI-NCF--SKFGRMEKAYSYFGEMKRQGV 301
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
N T++ + +FC+ G + A+MR + + PN + L+ G K + +D
Sbjct: 302 VANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIV 361
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L M G+ V Y + + LCK + EA +L M G+K N Y LIHG
Sbjct: 362 LLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHF 421
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
N E A L M N G E D + + LC+ + + A + G P+
Sbjct: 422 MNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTV 481
Query: 359 TMKSLVTGLASISKVAEANELI 380
+++ L K +EA L+
Sbjct: 482 IYTTIMDALFKAGKESEAVALL 503
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 1/279 (0%)
Query: 101 LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
L R ++ NE + I + N + A+ +M G+ V L+ G +
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+E K + + G+ PN+ Y ++ + ++G S ++L ++ +PN +
Sbjct: 460 KVDEAKSLLHKMAGC-GLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTY 518
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ G K + M + G+ V Y I CK+ +A L++ M+
Sbjct: 519 CALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMID 578
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G+ + Y LI G+ K+ NL+ A L M G + D YC+ F C +
Sbjct: 579 KGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQE 638
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A V + G P + L+ + + EA+ L
Sbjct: 639 ARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSL 677
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 1/263 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + ++ AM+ F +M G+ + +L+ G + ++ + E G+ P
Sbjct: 315 FCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVH-QGLVP 373
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY ++ C+ G + ++L+ M R ++ N + L+ G + + E +L
Sbjct: 374 NVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLL 433
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ G+ V++Y I LCK ++ +EAK+LL M G++PN Y ++ K
Sbjct: 434 NQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKA 493
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A L + + G +P+ + LC+ G A+ G P+
Sbjct: 494 GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553
Query: 361 KSLVTGLASISKVAEANELIGLM 383
+L+ G I + +A L+ M
Sbjct: 554 TALIDGFCKIGSLNKAMHLMNEM 576
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A I A+ F +M + GL +V A AL+ G + + + E G+ +
Sbjct: 527 KAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMID-KGMSLDK 585
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I + + + +++ +M ++ + + ++GF + ++ VL
Sbjct: 586 VVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSE 645
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
M GI VYN I+ KL EEA +L + M S
Sbjct: 646 MIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 147/310 (47%), Gaps = 6/310 (1%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D ++++ + L +A + +LL+E+ R + NE I + Q +I+ A
Sbjct: 352 SP-DTISYTTVLKGLCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICILCQKGLIEQA 409
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
E+M ++G ++ NAL+ G + + +F P +PN+ TY ++
Sbjct: 410 TMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP----CKPNTITYTTLLT 465
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + + +LAEM +K PN F +L++ F ++ ++ ++++ M + G
Sbjct: 466 GLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTP 525
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN + + SEEA LL G++S G+ P++ TY +I +E +E A K+F
Sbjct: 526 NLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 585
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ + G P + + LC+ + A+ ++ G +P+ T +L+ GLA+
Sbjct: 586 HIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645
Query: 371 SKVAEANELI 380
+ E +L+
Sbjct: 646 DFLKETRDLL 655
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM+ +EM G ++ N ++ G ++ + YG +P++ +Y V
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS-YGFQPDTVSYTTV 256
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + V + AEM K+ PN F +L+ F + E +VL+ M G
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A+ + NI I ++CK R ++A L+ M S G P+ +Y ++ G + E AK+
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M C P+ F F LCQ G E A + G + T +LV G
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436
Query: 369 SISKVAEANEL 379
+V A EL
Sbjct: 437 VQGRVDSALEL 447
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 4/254 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++ G V A N L+ G + +R+ P + P++ TY +I
Sbjct: 97 AARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP----VAPDAYTYTPII 152
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ G S+L +M + +P+ + +LL K + +VL M G
Sbjct: 153 RGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCT 212
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN+ I +C+ R ++A+ L+ + S G +P+ +Y ++ G E ++L
Sbjct: 213 PNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
FA M C P+ F M F C+GG E A++V G + + ++ +
Sbjct: 273 FAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICK 332
Query: 370 ISKVAEANELIGLM 383
+V +A + + M
Sbjct: 333 QGRVDDAFQFLNNM 346
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 145/316 (45%), Gaps = 15/316 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +++ + + ++ F ++L+E++ + P++ +++++ G + +D A
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNI------VTYNVIINGMCREGRVDDA 234
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + YG + + +L G +K +E+V+ +F E + PN T++ +++
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME-KNCMPNEVTFDMLVR 293
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC G +L +M N T +++ K+ + +D + L M G +
Sbjct: 294 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y ++ LC+ +R E+AK LL M+ + PN T+ I ++G +E A L
Sbjct: 354 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLI 413
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ GCE + + C G ++AL++ + K P+ T +L+TGL +
Sbjct: 414 EQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNA 470
Query: 371 SKVAEANELIGLMKKR 386
++ A EL+ M ++
Sbjct: 471 ERLDAAAELLAEMLQK 486
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TY ++++ C+S +L EMR K PN + +++ G +E + +D
Sbjct: 175 GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 234
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ L + G Y ++ LC KR E+ + L M+ + PN T+ L+
Sbjct: 235 REFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRF 294
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F + G +E A ++ M+ GC ++ + +C+ G + A + + G P
Sbjct: 295 FCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPD 354
Query: 357 FSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWN 395
+ +++ GL + +A EL+ +++K P + +N
Sbjct: 355 TISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFN 394
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 3/210 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ K+I++ C G +S +L R + + L+AG+ + + +
Sbjct: 73 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 132
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M +A Y I+ LC R EA +LLD ML RG +P++ TY L+
Sbjct: 133 RRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 189
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K A ++ M GC P+ + + +C+ G + A + + G+ P
Sbjct: 190 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 249
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +++ GL + + + EL M ++
Sbjct: 250 TVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/249 (19%), Positives = 97/249 (38%), Gaps = 38/249 (15%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P P + + ++ ++ L A +A ++LL E+ + F+V + + Q ++D
Sbjct: 452 PCKP-NTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL-VSFFCQKGLMD 509
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ E+M ++G PN TYN +
Sbjct: 510 EAIELVEQMMEHG------------------------------------CTPNLITYNTL 533
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ +S +L + + P+ + ++ +E + E+ K+ +++ G+
Sbjct: 534 LDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGM 593
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+YN + +LCK ++ A M+S G PN TY LI G E L+ +
Sbjct: 594 RPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRD 653
Query: 309 LFASMTNGG 317
L + + G
Sbjct: 654 LLRELCSRG 662
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 3/138 (2%)
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
AS N N R++ L EA L+D SRG P++ LI + G A +
Sbjct: 40 ASSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 99
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ + G D + + C+ G+ + A ++ ASM P T ++ GL
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLI-ASMPVA--PDAYTYTPIIRGLC 156
Query: 369 SISKVAEANELIGLMKKR 386
+V EA L+ M R
Sbjct: 157 DRGRVGEALSLLDDMLHR 174
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A++ +EM+ G++ ++ + L+ G + K++ IF + K G
Sbjct: 493 INLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKD-G 551
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I+P+ YN +I +FC G + EM+++ +P F ++ GF ++ + +
Sbjct: 552 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 611
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V MM G V+ YN I L + ++ E+A+ +LD M G+ PN TY ++HG+
Sbjct: 612 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 671
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A F + + G + D Y + C+ G ++AL V + A+ +
Sbjct: 672 ASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 731
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A + EA +L+ MK+
Sbjct: 732 FIYNILIDGWARRGDIWEAADLMQQMKR 759
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 133/301 (44%), Gaps = 2/301 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI VS ++ + + +E K + N + + I Y Q +D A
Sbjct: 382 VTYSILVSGFAKTGNAESADHWFQEAKEKHS-SLNAIIYGNIIYAYCQRCNMDKAEALVR 440
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D + ++ G + + ++ +F F K G+ P+ TY +I + +
Sbjct: 441 EMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERF-KECGLNPSVITYGCLINLYAKL 499
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + EM I+ N + +L+ GF K + + + + + K GI V +Y
Sbjct: 500 GKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLY 559
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I + C + + + A + M + KP T+ +IHGF ++G ++ A +F M
Sbjct: 560 NNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRM 619
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + + L + + E A ++ G P+ T +++ G AS+ +
Sbjct: 620 SGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGK 679
Query: 376 A 376
A
Sbjct: 680 A 680
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 154/392 (39%), Gaps = 49/392 (12%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+LK +N F I + + P+ L + A + + + + +++ + +P
Sbjct: 533 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIIT-AFCGMGKMDRAVCTVKEMQKQRHKPTT 591
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R +H G+ + A+ F+ M G +V NAL+LG + + E+ ++
Sbjct: 592 RTFMPI-IHGFARKGE---MKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQ 647
Query: 168 IFTEFPKVYGIEPNSETYNKV-----------------------------------IKSF 192
I E + G+ PN TY + +K+
Sbjct: 648 ILDEM-TLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKAC 706
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+SG S ++ EM ++I N + +L+ G+ + + ++Q M++ G+ +
Sbjct: 707 CKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDI 766
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y I + K + A ++ M S G+KPN+ TY LI+G+ + E A F
Sbjct: 767 HTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEE 826
Query: 313 MTNGGCEPDSYCFF-MFTYFL-----CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +PD + + T L G Y L VCR + T
Sbjct: 827 MKLSGLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKC 886
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
L I + E+ ++K FP + +++N L
Sbjct: 887 LLKIERT--GGEITEALQKTFPPNWNVYNNTL 916
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 112/267 (41%), Gaps = 14/267 (5%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK-----NYEEVKRIFTEFPKVY 176
G A DH Q +E +LNA++ G I+ N ++ + + E +
Sbjct: 395 GNAESADHWFQEAKEKHS--------SLNAIIYGNIIYAYCQRCNMDKAEALVREMEE-E 445
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+ + Y+ ++ + GD + + + P+ +G L+ + K K
Sbjct: 446 GIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKA 505
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V + ME GI + Y++ I KLK A A+ + ++ GIKP++ Y ++I
Sbjct: 506 LEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITA 565
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F G ++ A M +P + F + + GE + AL V G +P
Sbjct: 566 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPT 625
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
T +L+ GL K+ +A +++ M
Sbjct: 626 VHTYNALILGLVEKRKMEKAEQILDEM 652
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 128/310 (41%), Gaps = 2/310 (0%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R + + V+ ++ + + E+++ R + + + + I Y ++ A+
Sbjct: 311 RKEYGLMVNYYTRRGDMHRARETFEKMRAR-GIEPSSHVYTNLIHAYAVGRDMEEALSCV 369
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + G+ S+ + L+ G + N E F E + + N+ Y +I ++C+
Sbjct: 370 RKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHS-SLNAIIYGNIIYAYCQ 428
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ +++ EM + I + ++ G+ + V + ++CG+ V
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVIT 488
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I KL + +A + M GIK N+ TY LI+GF K + A +F +
Sbjct: 489 YGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 548
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +PD + C G+ + A+ + + P T ++ G A ++
Sbjct: 549 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMK 608
Query: 375 EANELIGLMK 384
+A ++ +M+
Sbjct: 609 KALDVFDMMR 618
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/266 (18%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + A +TFE+M G+ S L+ + ++ EE + K GIE
Sbjct: 321 YTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKM-KEEGIEM 379
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ ++ F ++G++ S E + K NA +G ++ + + + ++
Sbjct: 380 SLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALV 439
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME+ GI + +++Y+ + + ++ + + G+ P++ TY LI+ + K
Sbjct: 440 REMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKL 499
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A ++ M + G + + + M + ++ A + + G P
Sbjct: 500 GKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLY 559
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+++T + K+ A + M+K+
Sbjct: 560 NNIITAFCGMGKMDRAVCTVKEMQKQ 585
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+P+ ++GL++ + + + + M GI +VY I + + EEA +
Sbjct: 308 KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALS 367
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+ M GI+ +L TY L+ GF K GN E A F ++ + Y C
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYC 427
Query: 334 QGGEYETALKVCRASMAKG 352
Q + A + R +G
Sbjct: 428 QRCNMDKAEALVREMEEEG 446
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 101/257 (39%), Gaps = 20/257 (7%)
Query: 127 IDHAMQTFEEMDKY--GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+++ EE DK GLR+ ++ +N++ V F K P+ +
Sbjct: 268 VEYRSHWHEERDKARNGLRKVIETE---------PENWQAVVSAFERIKK-----PSRKE 313
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y ++ + GD +MR + I P++ + L+ + E+ ++ M+
Sbjct: 314 YGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMK 373
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ GI + Y+I + K +E A + N Y ++I+ + + N++
Sbjct: 374 EEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMD 433
Query: 305 GAKKLFASMTNGGCEP--DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A+ L M G + D Y M Y + G+ + L V G P T
Sbjct: 434 KAEALVREMEEEGIDAPIDIYHTMMDGYTMV--GDEDKCLLVFERFKECGLNPSVITYGC 491
Query: 363 LVTGLASISKVAEANEL 379
L+ A + KV++A E+
Sbjct: 492 LINLYAKLGKVSKALEV 508
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 135/316 (42%), Gaps = 28/316 (8%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVL--YGQANMID 128
D +S ++ L A L +E+K PD+ + ++I++ + +A +I+
Sbjct: 456 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV------YTYTILIDSFCKAGLIE 509
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A FEEM G +V AL+ + +K + IF G PN TY +
Sbjct: 510 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA-GCRPNDVTYGAL 568
Query: 189 IKSFCESGDSSSVYSILAEM----------------RRKSIRPNATDFGLLLAGFYKEHK 232
+ C++G+ S + + A++ R ++ PN +G L+ G K HK
Sbjct: 569 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 628
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ ++L M G VY+ I CK + + A+ + M G P++ TY
Sbjct: 629 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 688
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI K+G L+ A K+ + M C P+ + LC+ GE E ALK+ KG
Sbjct: 689 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 748
Query: 353 WVPHFSTMKSLVTGLA 368
P+ T +L+ GL
Sbjct: 749 CSPNVVTYTALIDGLG 764
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 125/333 (37%), Gaps = 13/333 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+DR L + + ++E R D + + H I +A+ D AM
Sbjct: 242 MDRFTVGCFAHALCKEGRWADALDMIE----REDFKLDTVLCTHMISGLMEASYFDEAMS 297
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M +V LL G + K KRI G PN +N ++ S+
Sbjct: 298 FLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM-MTEGCNPNPSLFNSLVHSY 356
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE-----DVGKVL--QMMEK 245
C D + Y +L M P + + + + K D+ + + +M+
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 416
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+ + VNV N + LC + + ++A L+ M+ +G P+ TY +I +E
Sbjct: 417 NCVLNKVNVANF-ARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 475
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF M G PD Y + + C+ G E A + + G P T +L+
Sbjct: 476 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 535
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+V +AN++ M + D+ AL
Sbjct: 536 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 568
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EPN Y+ +I FC++G S + +M + P+ + L+ +K+ + +
Sbjct: 643 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 702
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KVL M K V Y I LC++ SE+A LL M +G PN+ TY LI G
Sbjct: 703 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762
Query: 297 FGK 299
G+
Sbjct: 763 LGQ 765
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 133/299 (44%), Gaps = 7/299 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+++ V L Q N A ++L+E+ R ++ + + + + + +D A + M
Sbjct: 162 YNLLVRALCQNNRVGAARKMLDEM-ARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 220
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ NA++L +EV + ++ G++PN TY ++ +FC++G+
Sbjct: 221 PPVAA-----SYNAIVLALCREFRMQEVFSVVSDMVG-RGLQPNVITYTTIVDAFCKAGE 274
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ILA M PN F L+ G + + + D + + M G A YNI
Sbjct: 275 LRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNI 334
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I+ LC + + A ++L+ M G PN+ TY LI GF K G+L GA ++ M+ G
Sbjct: 335 LIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 394
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
C+P+ + C+ + A + + + P+ T +L+ L +V A
Sbjct: 395 CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRA 453
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 7/215 (3%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TYN ++++ C++ + +L EM RK P+ + +++ K + ++
Sbjct: 154 GVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEA 213
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL M + YN + +LC+ R +E +++ M+ RG++PN+ TY ++
Sbjct: 214 TEVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA 268
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K G L A + A M GC P+ F L G AL + R +A+GW P
Sbjct: 269 FCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 328
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR--FPK 389
+ L+ GL S+ + A+ ++ M++ FP
Sbjct: 329 TVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 363
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 2/292 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++++I + L S +L ++ N R + I + +A + A+ +
Sbjct: 330 VSYNILIRGLCSVGDLKGASSILNSMEQH-GCFPNVRTYSTLIDGFSKAGDLGGAISIWN 388
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M + G + +V ++ + + K + + + PN+ T+N +I+S C+
Sbjct: 389 DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM-LLENCPPNTVTFNTLIRSLCDC 447
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ EMRR PN + L+ G ++E D ++ M+ GI + Y
Sbjct: 448 RRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 507
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + LC+ + S EA + M+ +GI+PN T+ +IH + KEG + A + +M
Sbjct: 508 NTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 567
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
C + + + LC + A+ + +G P+ T LV G+
Sbjct: 568 VNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 5/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ + M G S + N L+ G + + I + +G PN TY+
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ-HGCFPNVRTYS 368
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ--MME 244
+I F ++GD SI +M R +PN + ++ F K+ + ++ ++E
Sbjct: 369 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 428
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
C +N I+SLC +R A + M G PN TY LIHG +EGN
Sbjct: 429 NC--PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 486
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M + G E + LCQ A+ + +G P+ T +++
Sbjct: 487 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 546
Query: 365 TGLASISKVAEANELIGLMK 384
+V A ++G M
Sbjct: 547 HAYCKEGEVRMAAWMLGAMN 566
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 30/171 (17%)
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V M K G+ V YN+ +++LC+ R A+ +LD M +G P+ TY ++
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205
Query: 299 KEGNLEGAKKLFAS------------------------------MTNGGCEPDSYCFFMF 328
K L+ A ++ A+ M G +P+ +
Sbjct: 206 KLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTI 265
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
C+ GE A + + G P+ T +LV GL +V +A ++
Sbjct: 266 VDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDM 316
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++PN YN +I S C+ + + + +EM K I P+ + L++GF K D
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M I V +NI + + CK + +E K + D M+ +GIKPN TY L+ G+
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ AK +F +M GG PD + + C+ +++ A+ + + K +P
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
T SL+ GL+ +++ A +L+ M R P + +N+ L
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSIL 442
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 3/264 (1%)
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+ M K G++ + N+L+ G L K + K IF + G+ P+ ++Y+ +I F
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGF 375
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ ++ EM RK+I P+ + L+ G K + +++ M G+ +
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTI 435
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN + +LCK+ + ++A ALL + +GI+PN+ TY LI G + G LE A+K+F
Sbjct: 436 RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEG 495
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
+ G + + + C G + AL + G +P T + ++ L +
Sbjct: 496 LLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 555
Query: 373 VAEANELIGLMKKR--FPKSGDMW 394
A +L+ M R P+ +W
Sbjct: 556 NDMAEKLLREMIARGVRPRQIAIW 579
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 111/229 (48%), Gaps = 1/229 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A F M + G+ + + + ++ G K ++E +F E + I P+ TY+
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR-KNIIPDVVTYS 404
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +SG S ++ +M + + P + +L K H+ + +L ++
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + Y+I I+ LC+ + E+A+ + +G+L +G N+DTY +I GF EG A
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
L + M + GC PD+ + + L + E + A K+ R +A+G P
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ F +M ++ V N L+ +E K +F K GI+PN TYN
Sbjct: 276 LNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK-QGIKPNFVTYN 334
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ +C + + SI M + + P+ + +++ GF K K+++ + + M +
Sbjct: 335 SLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK 394
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I V Y+ I L K R A L+D M RG+ P + TY ++ K ++ A
Sbjct: 395 NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKA 454
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L + + G +P+ Y + + LCQ G+ E A KV + KG + T ++ G
Sbjct: 455 IALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQG 514
Query: 367 LASISKVAEANELIGLMK 384
EA L+ M+
Sbjct: 515 FCVEGLFNEALALLSKME 532
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 125/296 (42%), Gaps = 36/296 (12%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +D A+ F + + N +L + SK+Y V + ++ + GI+PN
Sbjct: 64 NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYL-SQKMEFRGIKPNLVN 122
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG------------FYKE-- 230
N +I FC+ G +S+ A++ + P+ F L+ G F+ +
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVV 182
Query: 231 ---------------HKYEDVGK------VLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
H VG+ +LQ ++ + V +YN I S+CK+K
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L M+S+GI P++ TY LI GF G L A LF M +PD Y F +
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ G+ + V M +G P+F T SL+ G + +V +A + M +
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ + +D ++ +V N ++ K E +F+E GI P+ TY+ +I
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMIS-KGISPDVVTYSALI 267
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G + + +M ++I+P+ F +L+ F K+ K ++ V MM K GI
Sbjct: 268 SGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + C +K +AK++ + M G+ P++ +Y +I+GF K + A L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M PD + L + G AL++ +G P T S++ L
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCK 447
Query: 370 ISKVAEANELIGLMKKR 386
I +V +A L+ +K +
Sbjct: 448 IHQVDKAIALLTKLKDK 464
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 75/202 (37%), Gaps = 39/202 (19%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N +Y+ +F + D S+ + R++ P A +F +L K Y V +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q ME RGIKPNL LI+ F +
Sbjct: 109 QKME-----------------------------------FRGIKPNLVNCNILINCFCQL 133
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A +FA + G PD+ F LC G+ + A +A G+ HF +
Sbjct: 134 GLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGF--HFDQI 191
Query: 361 K--SLVTGLASISKVAEANELI 380
+L+ GL + + A +L+
Sbjct: 192 SYGTLIHGLCKVGETRAALDLL 213
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 4/273 (1%)
Query: 116 HSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+S ++ G A + +DHA+ +EM + ++ V NALL GC + +E+V R++ +
Sbjct: 196 YSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLV 255
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G PN TYN ++ C+ G V + M +++P+ +G+L+ G +
Sbjct: 256 KDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDV 315
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ +V + K G+ +YN ++ C+ R +EA D G++ NL TY +
Sbjct: 316 DGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIM 374
Query: 294 IHGFGKEGNLEGAKKLFASM-TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
I G G ++ A +L+ + + C PD+ F + LCQ G A + + G
Sbjct: 375 IKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSG 434
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ S++ GL ++ ++ +A ++ M K
Sbjct: 435 KQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 129/294 (43%), Gaps = 7/294 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV--LYGQANMIDHAM 131
D + F + L Q N + EE R +Q + F S++ L ++D A+
Sbjct: 403 DTVTFGTLIHGLCQNGFANKAFTIFEE--ARVSGKQLDVFSYSSMINGLCNVGRLVD-AV 459
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +E+MDK G + + NAL+ G + RI+++ G P TYN +I
Sbjct: 460 KVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD-NGCSPTVITYNTLIDG 518
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++ S+ EM P+ T +G L+ G + + K +D + + + G+
Sbjct: 519 LCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVD 578
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V ++NI I LC + +EA + M + PNL TY L+ G + G ++ A L+
Sbjct: 579 VMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
S+T G EPD + LC +++ +++G +P T LV
Sbjct: 639 TSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILV 692
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 41/305 (13%)
Query: 121 YGQANMIDHAMQTFEEMDKY-GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK-VYG- 177
+ +A M D A+ F + G + + NALL + ++ + + F +G
Sbjct: 93 FSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGR 152
Query: 178 -IEPNSETYNKVIKSFCESGDSSSVYS--------------------------------- 203
I PN +TYN V++S C GD +
Sbjct: 153 RIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHA 212
Query: 204 --ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQ 260
+L EM R ++P+ + LL G +K ++E V +V ++++ G + YN+ +
Sbjct: 213 LDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLD 272
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK R +E + + M++ ++P++ TY LIHG + G+++GA ++++ + G
Sbjct: 273 GLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVI 332
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D+ + CQ G + A K ++ G + + T ++ GL V EA EL
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIKGLFDSGMVDEAIELW 391
Query: 381 GLMKK 385
L++K
Sbjct: 392 DLLEK 396
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 130/313 (41%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + + I + L ++ + +++ E+ + L + + + + QA + A +
Sbjct: 298 DVITYGILIHGLCRSGDVDGAARVYSEI-IKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++ GLR ++ N ++ G S +E ++ K P++ T+ +I C
Sbjct: 357 WDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G ++ ++I E R + + + ++ G + D KV + M+K G +
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I C++ R+ +A + M G P + TY LI G K + A + M
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD + L + + AL + + + KG L+ GL S KV
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595
Query: 374 AEANELIGLMKKR 386
EA + MK++
Sbjct: 596 DEALHVFSDMKEK 608
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-GIEPN 181
+A A EM + G + +L+ G K ++ I+ + +Y G++ +
Sbjct: 521 KAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQI--LYKGLKVD 578
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMR-RKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+N +I C +G + ++M+ +K+ PN + L+ G Y+ + +
Sbjct: 579 VMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ + G+ + YN RI+ LC R E LLD +LSRGI P + T+ L+ K
Sbjct: 639 TSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKY 698
Query: 301 GNLE 304
G ++
Sbjct: 699 GPIQ 702
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 140/319 (43%), Gaps = 17/319 (5%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
V +L+ A + + L+E++ R + E V +I + +A D A++TF G
Sbjct: 58 VRRLAAAGDVDGVQYALQEMRLR-GVACTEDALVAAIGAFARAGSADRALKTFYRASDLG 116
Query: 142 LRQ-SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
R V N LL + V ++ K G++PN TYN +I++ C++ +
Sbjct: 117 CRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKA-GVDPNVYTYNLLIRALCQNDRVDA 175
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+L EM RK P+ G +++G K + E+ L E + + YN +
Sbjct: 176 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA--ETVPVQAS---YNAVVH 230
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+LC R E ++++ M+ RG++PN+ TY ++ F K L A + A M + GC P
Sbjct: 231 ALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTP 290
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ F + G+ AL + + +GW P + L+ GL I + A +
Sbjct: 291 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 350
Query: 381 GLMKKRFPKSGDMWNAALP 399
MK+ NA LP
Sbjct: 351 NSMKR---------NALLP 360
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++PN TY ++ +FC++ + +ILA M PN F L+ GF+++ K D
Sbjct: 252 GLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 311
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M G A YN+ I+ LC + + A + M + PN TY L+ G
Sbjct: 312 LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDG 371
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F G+L+GA ++ M + GC+P+ + LC+ ++ A + + P+
Sbjct: 372 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPN 431
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ L +V A + M++
Sbjct: 432 TVTFNTLIGRLCDCGRVGRALNVFHGMRR 460
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ A +D AM + EM G + +V ++ +++ + + + + P
Sbjct: 372 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM-LMDNCPP 430
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ T+N +I C+ G ++ MRR PN + LL G ++E ++D ++
Sbjct: 431 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMV 490
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G + YN I LC++ + A LL M+ +GI+P+ T+ +IH + KE
Sbjct: 491 IEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKE 550
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A L M C + + + LC G+ A+ + +G P+ +T
Sbjct: 551 GKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATW 610
Query: 361 KSLVTGL 367
LV +
Sbjct: 611 NVLVRAI 617
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ +YN +I+ C GD M+R ++ PNAT + L+ GF +
Sbjct: 322 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 381
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M+ G V VY I LCK ++A++L+D ML PN T+ LI
Sbjct: 382 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 441
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G + A +F M GC P+ + + L + G ++ A + + G+
Sbjct: 442 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS 501
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
T +++ L + A L+G M
Sbjct: 502 LVTYNTVINCLCQMCMRKHAMLLLGRM 528
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 140/328 (42%), Gaps = 40/328 (12%)
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R N + I + Q + AM+ +EM + G+ + N+L++G +K +E +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN----------- 216
E + G++PN+ TY I + E+ + +S + EMR + PN
Sbjct: 509 FLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 217 ------------------------ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
A + +L+ G +K K +D ++ + M GIA V
Sbjct: 568 CKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + I KL ++A ++ D M+ G+ PN+ Y L+ GF + G +E AK+L
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 313 MTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ G P+ +YC + Y C+ G+ A ++ KG VP +LV G +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGY--CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 371 SKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ V A + G KK S +NA +
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALI 773
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 141/322 (43%), Gaps = 18/322 (5%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD +S+ + L + + +A L+ E+ + + + I + + +++ A
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH-GINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+ M GL A +L+ G KN + + E K I + TY V+K
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGM 427
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C SGD Y+I+ EM RPN + L+ F + ++ D +VL+ M++ GIA +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I L K KR +EA++ L M+ G+KPN TY I G+ + A K
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 313 MTNGGCEPDSYCFFMFTYFLCQG--GEY---ETALKVC---RASMAKGWVPHFSTMKSLV 364
M G P+ LC G EY E ++ C R+ + +G + T L+
Sbjct: 548 MRECGVLPNK--------VLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 365 TGLASISKVAEANELIGLMKKR 386
GL KV +A E+ M+ +
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGK 621
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 147/356 (41%), Gaps = 57/356 (16%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--ID 128
D +++ ++ L + + + ++ E++ + PD+ + +++ G + + +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV------FSYGVLINGFSKLGNMQ 644
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F+EM + GL +V N LL G S E+ K + E V G+ PN+ TY +
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTI 703
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNA------------------------------- 217
I +C+SGD + + + EM+ K + P++
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA 763
Query: 218 ---TDFGLLLAGFYKEHKYEDVGKVLQMM-----EKCGIASGVNVYNIRIQSLCKLKRSE 269
F L+ +K K E +VL + ++ G + V YNI I LCK E
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT-YNIMIDYLCKEGNLE 822
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
AK L M + + P + TY L++G+ K G +F G EPD + +
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPH-----FSTMKSLVTGLASISKVAEANELI 380
+ G AL + AK V ST ++L++G A + ++ A +++
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P TY+ +I C+ S+L EM + + + LL+ G K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M GI +Y+ I + K E+AKAL DGM++ G+ P Y LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +E N+ +L M Y + +C G+ + A + + +A G P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+L+ S+ +A ++ MK++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EMD G+ + L+ G + +N + K + E +GI Y+
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS-HGINIKPYMYD 351
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I + G ++ M + P A + L+ G+ +E ++L M+K
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I Y ++ +C + A ++ M++ G +PN+ Y LI F + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M G PD +C+ L + + A + G P+ T + ++G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 367 LASISKVAEANELIGLMKK 385
S+ A A++ + M++
Sbjct: 532 YIEASEFASADKYVKEMRE 550
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN TYN +I C+ G+ + + +M+ ++ P + LL G+ K + ++
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-----GIKPNLDTYKHL 293
V GI +Y++ I + K + +A L+D M ++ G K ++ T + L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ GF K G +E A+K+ +M PDS
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 140/328 (42%), Gaps = 40/328 (12%)
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R N + I + Q + AM+ +EM + G+ + N+L++G +K +E +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN----------- 216
E + G++PN+ TY I + E+ + +S + EMR + PN
Sbjct: 509 FLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 217 ------------------------ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
A + +L+ G +K K +D ++ + M GIA V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + I KL ++A ++ D M+ G+ PN+ Y L+ GF + G +E AK+L
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 313 MTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ G P+ +YC + Y C+ G+ A ++ KG VP +LV G +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGY--CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 371 SKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ V A + G KK S +NA +
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALI 773
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 2/314 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD +S+ + L + + +A L+ E+ + + + I + + +++ A
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH-GINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+ M GL A +L+ G KN + + E K I + TY V+K
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGM 427
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C SGD Y+I+ EM RPN + L+ F + ++ D +VL+ M++ GIA +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I L K KR +EA++ L M+ G+KPN TY I G+ + A K
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G P+ C+ G+ A R+ + +G + T L+ GL K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 373 VAEANELIGLMKKR 386
V +A E+ M+ +
Sbjct: 608 VDDAEEIFREMRGK 621
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 147/356 (41%), Gaps = 57/356 (16%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--ID 128
D +++ ++ L + + + ++ E++ + PD+ + +++ G + + +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV------FSYGVLINGFSKLGNMQ 644
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F+EM + GL +V N LL G S E+ K + E V G+ PN+ TY +
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTI 703
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNA------------------------------- 217
I +C+SGD + + + EM+ K + P++
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA 763
Query: 218 ---TDFGLLLAGFYKEHKYEDVGKVLQMM-----EKCGIASGVNVYNIRIQSLCKLKRSE 269
F L+ +K K E +VL + ++ G + V YNI I LCK E
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT-YNIMIDYLCKEGNLE 822
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
AK L M + + P + TY L++G+ K G +F G EPD + +
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPH-----FSTMKSLVTGLASISKVAEANELI 380
+ G AL + AK V ST ++L++G A + ++ A +++
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P TY+ +I C+ S+L EM + + + LL+ G K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M GI +Y+ I + K E+AKAL DGM++ G+ P Y LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +E N+ +L M Y + +C G+ + A + + +A G P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+L+ S+ +A ++ MK++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EMD G+ + L+ G + +N + K + E +GI Y+
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS-HGINIKPYMYD 351
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I + G ++ M + P A + L+ G+ +E ++L M+K
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I Y ++ +C + A ++ M++ G +PN+ Y LI F + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M G PD +C+ L + + A + G P+ T + ++G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 367 LASISKVAEANELIGLMKK 385
S+ A A++ + M++
Sbjct: 532 YIEASEFASADKYVKEMRE 550
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN TYN +I C+ G+ + + +M+ ++ P + LL G+ K + ++
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-----GIKPNLDTYKHL 293
V GI +Y++ I + K + +A L+D M ++ G K ++ T + L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ GF K G +E A+K+ +M PDS
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 140/328 (42%), Gaps = 40/328 (12%)
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R N + I + Q + AM+ +EM + G+ + N+L++G +K +E +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN----------- 216
E + G++PN+ TY I + E+ + +S + EMR + PN
Sbjct: 509 FLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 217 ------------------------ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
A + +L+ G +K K +D ++ + M GIA V
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + I KL ++A ++ D M+ G+ PN+ Y L+ GF + G +E AK+L
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 313 MTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ G P+ +YC + Y C+ G+ A ++ KG VP +LV G +
Sbjct: 688 MSVKGLHPNAVTYCTIIDGY--CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 371 SKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ V A + G KK S +NA +
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALI 773
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 2/314 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD +S+ + L + + +A L+ E+ + + + I + + +++ A
Sbjct: 310 LDNHTYSLLIDGLLKGRNADAAKGLVHEMVSH-GINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+ M GL A +L+ G KN + + E K I + TY V+K
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGM 427
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C SGD Y+I+ EM RPN + L+ F + ++ D +VL+ M++ GIA +
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I L K KR +EA++ L M+ G+KPN TY I G+ + A K
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G P+ C+ G+ A R+ + +G + T L+ GL K
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 373 VAEANELIGLMKKR 386
V +A E+ M+ +
Sbjct: 608 VDDAEEIFREMRGK 621
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 149/356 (41%), Gaps = 57/356 (16%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--ID 128
D +++ ++ L + + + ++ E++ + PD+ + +++ G + + +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV------FSYGVLINGFSKLGNMQ 644
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F+EM + GL +V N LL G S E+ K + E V G+ PN+ TY +
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTI 703
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNA--------------------TDFGL------ 222
I +C+SGD + + + EM+ K + P++ T FG
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCA 763
Query: 223 --------LLAGFYKEHKYEDVGKVLQMM-----EKCGIASGVNVYNIRIQSLCKLKRSE 269
L+ +K K E +VL + ++ G + V YNI I LCK E
Sbjct: 764 SSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT-YNIMIDYLCKEGNLE 822
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
AK L M + + P + TY L++G+ K G +F G EPD + +
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPH-----FSTMKSLVTGLASISKVAEANELI 380
+ G AL + AK V ST ++L++G A + ++ A +++
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P TY+ +I C+ S+L EM + + + LL+ G K +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M GI +Y+ I + K E+AKAL DGM++ G+ P Y LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +E N+ +L M Y + +C G+ + A + + +A G P+
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+L+ S+ +A ++ MK++
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EMD G+ + L+ G + +N + K + E +GI Y+
Sbjct: 293 LEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS-HGINIKPYMYD 351
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I + G ++ M + P A + L+ G+ +E ++L M+K
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I Y ++ +C + A ++ M++ G +PN+ Y LI F + A
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDA 471
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M G PD +C+ L + + A + G P+ T + ++G
Sbjct: 472 MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG 531
Query: 367 LASISKVAEANELIGLMKK 385
S+ A A++ + M++
Sbjct: 532 YIEASEFASADKYVKEMRE 550
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 5/149 (3%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN TYN +I C+ G+ + + +M+ ++ P + LL G+ K + ++
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-----GIKPNLDTYKHL 293
V GI +Y++ I + K + +A L+D M ++ G K ++ T + L
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRAL 921
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ GF K G +E A+K+ +M PDS
Sbjct: 922 LSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 139/305 (45%), Gaps = 9/305 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D+ ++ +S + +++ +E+ T+ ++ + + I Y +D A+Q
Sbjct: 182 DKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQY 241
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M + G+ +V N L+ + + + E + G+ P+ TYN +I +C
Sbjct: 242 REDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQR-NGLSPDVFTYNILINGYC 300
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G+ + EM RK +R A + L+ F ++ + ++ ++ ++ K GI V
Sbjct: 301 KEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVV 360
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I S C E A ++ M + I P+ TY LI GF G L+ A+ L M
Sbjct: 361 MYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEM 420
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
T G +PD LC+ G+ + A + + + KG P ST SL+ GL ++ +
Sbjct: 421 TKRGIQPD--------LGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQ 472
Query: 374 AEANE 378
A +
Sbjct: 473 MSAAD 477
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 123/290 (42%), Gaps = 3/290 (1%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGC 156
LE L+ P R N + I + + A++ EM ++ G+ L+ G
Sbjct: 136 LELLRQMP--RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGW 193
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
E+ ++F E + P++ YN +I +C+ G +M ++ +
Sbjct: 194 CKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMT 253
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ LL+ + + + D VL+ M++ G++ V YNI I CK ++A + +
Sbjct: 254 VATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFE 313
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M +G++ TY LI+ F ++G ++ +LF G PD + C GG
Sbjct: 314 EMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGG 373
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ E A ++ K P T +L+ G + ++ EA LI M KR
Sbjct: 374 DMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKR 423
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 38/254 (14%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMR-RKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN+ TYN VI FC G + ++ EMR R I P+ + L++G+ K + ED K
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAK 204
Query: 239 VL------------------------------------QMMEKCGIASGVNVYNIRIQSL 262
V + M + G+A V YN+ + +L
Sbjct: 205 VFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHAL 264
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
R+ +A A+L+ M G+ P++ TY LI+G+ KEGN + A ++F M+ G +
Sbjct: 265 FMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATA 324
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ Y + G+ + ++ + ++ KG P +L+ + + A E++
Sbjct: 325 VTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAE 384
Query: 383 M-KKRFPKSGDMWN 395
M KKR P +N
Sbjct: 385 MEKKRIPPDDVTYN 398
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL- 240
+ T+N +++ C +G +L R+ RPNA + ++AGF + + +V+
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELL----RQMPRPNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIHGFGK 299
+M E+ GIA Y I CK+ R E+A + D ML++G + P+ Y LI G+
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G L+ A + M G + + + L G A V G P T
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291
Query: 360 MKSLVTG 366
L+ G
Sbjct: 292 YNILING 298
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 6/269 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A M+ A + M ++ +V + N ++ G ++N E+ E ++ G P
Sbjct: 76 KAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREMEEL-GHPPTP 133
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y+ +++SFC++G+ S + AEM K P+ +F +LL+G ++ K + ++ +
Sbjct: 134 HAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRS 193
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G V YN I LCK K+ +EA LL+ M + P TY LI K
Sbjct: 194 MNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFAR 253
Query: 303 LEGAKKLFASMTNGGC---EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
L+ A ++F M G C EP +Y + LC+ A ++ + +G P T
Sbjct: 254 LQQAYEVFEKMAEGPCPCTEP-AYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVT 312
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFP 388
+L+ GL S +K+ +A EL M + P
Sbjct: 313 YNTLLEGLLSTAKLQDAMELTYFMLDQVP 341
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 8/314 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQT 133
++++I + +A + L E++ +L H +S ++ + + + AM
Sbjct: 99 VSYNIIIDGYCKARNIEKALAFLREME---ELGHPPTPHAYSSIVQSFCKTGNVSKAMDV 155
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM G + N LL G ++ E + +F G +P+ TYN +I C
Sbjct: 156 FAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSM-NSRGCKPDVVTYNTMIAGLC 214
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK--CGIASG 251
+ +L M+++ + P + L+ K + + +V + M + C
Sbjct: 215 KWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEP 274
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
I I LCK +R EAK + M RGI P + TY L+ G L+ A +L
Sbjct: 275 AYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTY 334
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + P+ + + + LC+ + E A K+ A KG+VP + L++ LA
Sbjct: 335 FMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAG 394
Query: 372 KVAEANELIGLMKK 385
++ +A EL M +
Sbjct: 395 RLDDAFELYKEMSR 408
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE----EVKRIFTEFPKVYGI 178
+A+++ A EEM G V + L+ G S +++ ++ R+ G+
Sbjct: 6 EADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEA-----GL 60
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN+ YN +I C++G + S L M + PN + +++ G+ K E
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCA-PNVVSYNIIIDGYCKARNIEKALA 119
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
L+ ME+ G + Y+ +QS CK +A + M ++G +P++ + L+ G
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+ + A++LF SM + GC+PD + LC+ + + A+ + + P F
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239
Query: 359 TMKSLVTGLASISKVAEANELIGLM 383
T +L+ L +++ +A E+ M
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKM 264
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 1/198 (0%)
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I+ E+ + +I+ EM+ P+ LL+ GF+K ++ L M + G+
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+YN I LCK EA++ L M + PN+ +Y +I G+ K N+E A
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALA 119
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M G P + + C+ G A+ V AKG P L++GL
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179
Query: 369 SISKVAEANELIGLMKKR 386
K+ EA EL M R
Sbjct: 180 RARKIHEARELFRSMNSR 197
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 107/295 (36%), Gaps = 38/295 (12%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A I A + F M+ G + V N ++ G K +E E K + P
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAV-FLLERMKQEDVSPTF 238
Query: 183 ETYNKVIKSFCESGD------------------SSSVYSIL------------------- 205
TY +I C+ + YS+L
Sbjct: 239 VTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMF 298
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
EMR + I P + LL G K +D ++ M A + Y I I SLCK
Sbjct: 299 QEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKT 358
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ EEA LL M +G P+L ++ L+ + G L+ A +L+ M+ C+
Sbjct: 359 DQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSS 418
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + G + A + G VP T LV GL K +A +L+
Sbjct: 419 NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLV 473
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F+EM G+ +V N LL G + + ++ + T F PN TY +
Sbjct: 293 EAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMEL-TYFMLDQVPAPNMFTYEIL 351
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I S C++ + +L+ MR K P+ + +LL+ + + +D ++ + M +
Sbjct: 352 ISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINC 411
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V NI + + + +EAK L M GI P+ TY L+ G +G + A+K
Sbjct: 412 QQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARK 471
Query: 309 LFASMTNGG 317
L + G
Sbjct: 472 LVEELVRDG 480
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 109/266 (40%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I A+ ++M + G + N L+ G L E + G +P
Sbjct: 161 YCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQP 219
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY V+ C+ GD S+L +M + I N + ++ G K +D +
Sbjct: 220 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLF 279
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME GI V YN I LC R +A LL M+ R I PN+ T+ LI F KE
Sbjct: 280 NKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKE 339
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KLF M +P+ + C + A ++ ++K +P T
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V E EL M +R
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQR 425
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A F +M+ G++ V N+L+ + + R+ ++ + I PN T+N
Sbjct: 272 MDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFN 330
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F + G + EM ++SI PN + L+ GF + ++ ++ +M
Sbjct: 331 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 390
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I+ CK KR EE L M RG+ N TY LI G + G+ + A
Sbjct: 391 DCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 450
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+K+F M + G PD + + LC+ G+ E AL V P+ T ++ G
Sbjct: 451 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEG 510
Query: 367 LASISKVAEANEL 379
+ KV + +L
Sbjct: 511 MCKAGKVEDGWDL 523
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 138/308 (44%), Gaps = 12/308 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMID 128
D + F+ + L N + L++ + R PDL + V+ G + ID
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDL------FTYGTVVNGLCKRGDID 238
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ ++M+K + +V N ++ G K+ ++ +F + + GI+P+ TYN +
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNSL 297
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C G S +L++M + I PN F L+ F KE K + K+ M + I
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I C R +EA+ + M+S+ P++ TY LI GF K +E +
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M+ G ++ + L Q G+ + A K+ + ++ G P T L+ GL
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477
Query: 369 SISKVAEA 376
K+ +A
Sbjct: 478 KYGKLEKA 485
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A Q F M V N L+ G +K EE +F E + G+ N+ TYN
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYN 435
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ ++GD I +M + P+ + +LL G K K E V + ++K
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YNI I+ +CK + E+ L + +G+KPN+ Y +I GF ++G E A
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M G PDS C+ + G+ + ++ + + G+V ST+ ++
Sbjct: 556 DALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 615
Query: 367 L 367
L
Sbjct: 616 L 616
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++ + L + H + L +++T+ PD+ + + YG+ + A +
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL-ISCLCNYGRWS---DASRLL 314
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + + +V N+L+ E +++F E + I+PN TYN +I FC
Sbjct: 315 SDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLINGFCM 373
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
I M K P+ + L+ GF K + E+ ++ + M + G+
Sbjct: 374 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN IQ L + + A+ + M+S G+ P++ TY L+ G K G LE A +F +
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
EP+ Y + + +C+ G+ E + + KG P+ ++++G
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 553
Query: 375 EANELIGLMKK--RFPKSG 391
EA+ L MK+ P SG
Sbjct: 554 EADALFREMKEDGTLPDSG 572
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 136/311 (43%), Gaps = 2/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ +S L ++ S+LL ++ R + N I + + + A +
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFNSLIDAFAKEGKLIEAEKL 348
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM + + ++ N+L+ G + +E ++IFT + P+ TYN +IK FC
Sbjct: 349 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLIKGFC 407
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ + EM ++ + N + L+ G ++ + K+ + M G+ +
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I + LCK + E+A + + + ++PN+ TY +I G K G +E LF S+
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G +P+ + C+ G E A + R G +P +L+
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 587
Query: 374 AEANELIGLMK 384
A + ELI M+
Sbjct: 588 AASAELIKEMR 598
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EM K S+ + LL I N +V E + GI N TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLL-SAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC ++L +M + P+ LL G+ + + ++ M +
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G +N I L ++ EA AL+D M++RG +P+L TY +++G K G+++ A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G E + + LC+ + A + KG P T SL++
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300
Query: 367 LASISKVAEANELIGLMKKR 386
L + + ++A+ L+ M +R
Sbjct: 301 LCNYGRWSDASRLLSDMIER 320
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 125/302 (41%), Gaps = 3/302 (0%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQ 144
LS+ +A++ E +K+RP E + S + + N D + E+M G+
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI--AKMNKFDVVISLGEQMQNLGIPH 114
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
+ ++LL C ++ + G EP+ T + ++ +C S ++
Sbjct: 115 N-HYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 173
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+ +M +P+ F L+ G + +K + ++ M G + Y + LCK
Sbjct: 174 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 233
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ A +LL M I+ N+ Y +I G K +++ A LF M G +PD +
Sbjct: 234 RGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 293
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ LC G + A ++ + + P+ T SL+ A K+ EA +L M
Sbjct: 294 YNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 353
Query: 385 KR 386
+R
Sbjct: 354 QR 355
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 1/215 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A ++ M+ F EM + GL + N L+ G + + + ++IF + G+ P
Sbjct: 406 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPP 464
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ ++ C+ G + +++ + PN + +++ G K K ED +
Sbjct: 465 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V +Y I C+ EEA AL M G P+ Y LI ++
Sbjct: 525 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 584
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
G+ + +L M + G D+ M L G
Sbjct: 585 GDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 619
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++PN YN +I S C+ + + + +EM K I P+ + L++GF K +D
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M I V +NI + + CK + +E K + D M+ +GIKPN TY L+ G+
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ AK +F +M GG PD + + C+ +++ A+ + + K +P
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
T SL+ GL+ +++ A +L+ M R P + +N+ L
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSIL 442
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 7/260 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVY--GIE 179
+ +++ A F EM G+ V +AL+ G CIL K +K F K+ I+
Sbjct: 237 KVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGK----LKDAIDLFNKMILENIK 292
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ T+N ++ +FC+ G ++ M ++ I+PN + L+ G+ + +
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M + G+ + Y+I I CK+K+ +EA L M + I P++ TY LI G K
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A +L M + G P+ + LC+ + + A+ + KG+ P ST
Sbjct: 413 SGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDIST 472
Query: 360 MKSLVTGLASISKVAEANEL 379
L+ GL K+ +A ++
Sbjct: 473 YSILIKGLCQSGKLEDARKV 492
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+ M K G++ + N+L+ G L K + K IF + G+ P+ ++Y+ +I F
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG-GVNPDIQSYSIMINGF 375
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ ++ EM RK+I P+ + L+ G K + +++ M G+ +
Sbjct: 376 CKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNI 435
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN + +LCK + ++A ALL +G +P++ TY LI G + G LE A+K+F
Sbjct: 436 CTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFED 495
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ G D Y + + C G + AL + G +P T + ++ L
Sbjct: 496 LLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 36/296 (12%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +D A+ F + + N +L + SK+Y V + ++ + GI+PN
Sbjct: 64 NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYL-SQKMEFRGIKPNLVN 122
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF-----GLLLAGFYKE--------- 230
N +I FC+ G +S+ A++ + P+ F GL L G ++
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVV 182
Query: 231 ---------------HKYEDVGK------VLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
H VG+ +LQ ++ + V +YN I S+CK+K
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L M+S+GI P++ TY LI GF G L+ A LF M +PD Y F +
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILV 302
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ G+ + V M +G P+F T SL+ G + +V +A + M +
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ + +D ++ +V N ++ K E +F+E GI P+ TY+ +I
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVS-KGISPDVVTYSALI 267
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G + +M ++I+P+ F +L+ F K+ K ++ V MM K GI
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + C +K +AK++ + M G+ P++ +Y +I+GF K + A L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M PD + L + G AL++ +G P+ T S++ L
Sbjct: 388 FKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCK 447
Query: 370 ISKVAEANELIGLMKKR 386
+V +A L+ K +
Sbjct: 448 THQVDKAIALLTKFKDK 464
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGL 142
+ + N +I + + PD++ +SI++ G + D AM F+EM + +
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQS------YSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
V ++L+ G S ++ + G+ PN TYN ++ + C++
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHD-RGVPPNICTYNSILDALCKTHQVDKAI 455
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
++L + + K +P+ + + +L+ G + K ED KV + + G V Y I IQ
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C EA ALL M G P+ TY+ +I K+ + A+KL M G +
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF 575
Query: 323 YCFFM 327
Y ++
Sbjct: 576 YDLYL 580
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 76/202 (37%), Gaps = 39/202 (19%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N +Y+ +F + D S+ + R++ P A +F +L K Y V +
Sbjct: 49 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q ME RGIKPNL LI+ F +
Sbjct: 109 QKME-----------------------------------FRGIKPNLVNCNILINCFCQL 133
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A +FA + G PD+ F + LC G+ + A +A G+ HF +
Sbjct: 134 GLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF--HFDQI 191
Query: 361 K--SLVTGLASISKVAEANELI 380
+L+ GL + + A +L+
Sbjct: 192 SYGTLIHGLCKVGETRAALDLL 213
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 131/274 (47%), Gaps = 11/274 (4%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKY---GLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+I++ G +AN + A+ FE+M ++ R +N L + SK YE + E
Sbjct: 11 TIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYE----VLKE 66
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEM-RRKSIRPNATDFGLLLAGFYKE 230
+ P+ TY+ VI FC+ G+ IL EM R I P+ + ++ G ++
Sbjct: 67 MRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRD 126
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPNLDT 289
K + ++++ M+ G+ ++ I C ++ +EA L +L S KP++ T
Sbjct: 127 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVT 186
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y LI GF K GNLE A K+ M C P+ + + LC+ G+ + AL + R
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+KG VP+ T +L+ GL + KV A L+ M
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM 280
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 130/324 (40%), Gaps = 5/324 (1%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
G S+AP D + +S ++ + + ++L E+ TR + + + + +
Sbjct: 70 GKSVAP----DLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCR 125
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+D A + EM G+ +AL+ G ++ +E +++ E +P+
Sbjct: 126 DGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVV 185
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I FC+SG+ +L M + PN + LL G K + + + M
Sbjct: 186 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 245
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G V Y I LC + + A+ L+D M + P+ +Y L+ G+ + G +
Sbjct: 246 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRI 305
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA-LKVCRASMAKGWVPHFSTMKS 362
E AK+LF M C PD + C E A + A G P T
Sbjct: 306 EEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 365
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
+V G + + EA E I M R
Sbjct: 366 VVAGYSRAKRFVEAAEFIQEMIAR 389
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 4/272 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+S +L+G +A +D A+ F M G +V L+ G + + + + E
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 281
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
P++ +YN ++ +C G + EM KS P+ + L+ GF +
Sbjct: 282 ATC-CPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRL 340
Query: 234 EDVGKVLQMMEKC-GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E+ +L+ M+ GI V Y+I + + KR EA + M++R + PN TY
Sbjct: 341 EEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSS 400
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI G K G ++ A ++ +M N EP F LC+ G+ + A K+ A A G
Sbjct: 401 LIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHG 460
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
P T +L+ G + ++ A EL +M+
Sbjct: 461 LEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 492
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 116/273 (42%), Gaps = 9/273 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + I+ A Q F+EM L+ G + EE + + GI+P
Sbjct: 299 YCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDP 358
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ V+ + + + EM +++ PNA + L+ G K + + +VL
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVL 418
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + V +N I +LC+L +EA LL M + G++P + TY L+ GF +
Sbjct: 419 KNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRT 478
Query: 301 GNLEGAKKLFASM--------TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
G +E A +LF M + P+ F LC+ E + A+ V ++
Sbjct: 479 GRMEIAYELFEVMRKKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRE 537
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P ++V GL + EA +LI + K
Sbjct: 538 CEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 570
>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G +++ + + M + G+ S+ N L+ G + S E +++F E I P
Sbjct: 193 FGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF-EVMDGGKIVP 251
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +IK +C++G +M K+++P+ + L+ Y E ++ +
Sbjct: 252 DTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLY 311
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME+ G+ + Y++ I LCK ++ EA A+ + M +G + N+ Y LI + K
Sbjct: 312 LEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKN 371
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++E A +LF M N G EPD+ + + LC+ G + +++ KG +
Sbjct: 372 GSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFY 431
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL ++ +A L M ++
Sbjct: 432 ASLIDGLGKAGRIEDAENLFEEMSEK 457
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A + AM+ F +M+ ++ L+ C ++++ ++ E + G+E
Sbjct: 263 YCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEE-RGLEI 321
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+Y+ VI C+ Y++ M +K R N + L+ + K E+ ++
Sbjct: 322 PPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLF 381
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ G Y++ + LCK R ++ L D ++G+ N Y LI G GK
Sbjct: 382 ERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKA 441
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G +E A+ LF M+ GC DSYC+ L + G+ + AL + +G T
Sbjct: 442 GRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTF 501
Query: 361 KSLVTGLASISKVAEA 376
L+ GL K EA
Sbjct: 502 TILIDGLFKEHKNEEA 517
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 4/268 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +S+V+ G + A FE M++ G R +V AL+ + + EE R+F E
Sbjct: 324 HSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLF-E 382
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G EP++ TY+ ++ C+SG + R K + NA + L+ G K
Sbjct: 383 RMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAG 442
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ ED + + M + G A YN I +L K + ++A AL M G + T+
Sbjct: 443 RIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFT 502
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G KE E A K + M + G P F LC G+ A K+
Sbjct: 503 ILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPM 562
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANEL 379
G +P + + ++ L ++ EA +L
Sbjct: 563 GIIPE-TAFEDMINTLCKAQRIKEACKL 589
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 3/244 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S+ V+ L ++ + +L + + + + N F+ I G+A I+ A
Sbjct: 392 DAVTYSVLVNGLCKSGRLDDGMELFDFCRNK-GVAINAMFYASLIDGLGKAGRIEDAENL 450
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEEM + G + NA++ ++ +F + G + T+ +I
Sbjct: 451 FEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEE-EGCDQTVYTFTILIDGLF 509
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +M K I P F L G K K+L + GI
Sbjct: 510 KEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE-T 568
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+ I +LCK +R +EA L DG++ RG + LI+ K GN + KL S
Sbjct: 569 AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSK 628
Query: 314 TNGG 317
G
Sbjct: 629 IGIG 632
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 7/270 (2%)
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+L G +NM +H + +F K+ ++ S + + +L L + E R F K
Sbjct: 88 LLDGSSNM-EHNLDSF--CRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKY 144
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
E + +I+ S D + + E++ + + + L+ F E++
Sbjct: 145 VHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLW 204
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V + M++ GI + YN + L E A+ + + M I P+ TY +I G+
Sbjct: 205 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 264
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW--VPH 356
K G L+ A + F M +PD + +++T L + +G PH
Sbjct: 265 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 324
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
++ ++ GL K EA + M ++
Sbjct: 325 SYSL--VIGGLCKQRKCMEAYAVFETMNQK 352
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A Q F+EM + G+ ++ N L+ G E ++ + K GI PN TYN +I
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLITYNTLI 345
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G S+ +++ + + P+ + +L++GF ++ K+++ ME+ GI
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I I + + E+A L M G+ P++ TY LIHGF +G + A +L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F SM CEP+ + C+ G ALK+ + K P+ ++ + ++ L
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 370 ISKVAEANELIGLM 383
K EA L+ M
Sbjct: 526 ERKSKEAERLVEKM 539
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 139/319 (43%), Gaps = 12/319 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD +F I + +A LL EL T N + I + I+ A
Sbjct: 161 LDVYSFGILIKGCCEAGEIEKSFDLLIEL-TEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219
Query: 133 TFEEMDKYGL----RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
F EM K GL R +N L + + +E +++ + G+ PN TYN V
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQED-----GVFPNLYTYNCV 274
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+ G + + + EMR + + N + L+ G +E K + KV+ M+ GI
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I C + + +A +L + SRG+ P+L TY L+ GF ++G+ GA K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGL 367
+ M G +P + + + E A+++ R SM + G VP T L+ G
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL-RLSMEELGLVPDVHTYSVLIHGF 453
Query: 368 ASISKVAEANELIGLMKKR 386
++ EA+ L M ++
Sbjct: 454 CIKGQMNEASRLFKSMVEK 472
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 127/310 (40%), Gaps = 35/310 (11%)
Query: 112 RFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+F ++ +++ Y Q+ ++ ++ F EM G + N LL + S ++ + F
Sbjct: 93 KFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFF 152
Query: 170 TEF-PKV--------------------------------YGIEPNSETYNKVIKSFCESG 196
E KV +G PN Y +I C+ G
Sbjct: 153 NENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ + EM + + N + +L+ G +K + ++ + M++ G+ + YN
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ LCK R+++A + D M RG+ N+ TY LI G +E L A K+ M +
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G P+ + C G+ AL +CR ++G P T LV+G + A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 377 NELIGLMKKR 386
+++ M++R
Sbjct: 393 AKMVKEMEER 402
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+ P+ TYN ++ FC GD+S ++ EM + I+P+ + +L+ F +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E ++ ME+ G+ V+ Y++ I C + EA L M+ + +PN Y +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G+ KEG+ A KL M P+ + LC+ + + A ++ + G
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 354 VPHFSTMKSLVTGLASISKVA 374
P S + SL++ + S V+
Sbjct: 545 DPSTSIL-SLISRAKNDSHVS 564
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSI---LAEMRRKSIRPNATDFGLLLAGFYKE 230
K +G+ P+ TYN +I +C+ G + ++Y + L EM I P A FG+L+ G+ K
Sbjct: 153 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 212
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+V + M++ GIA+ V YN I LC + EE L++ M G+ PN T+
Sbjct: 213 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 272
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
++ GF K+G + A MT EPD + + + G+ E A+ V A
Sbjct: 273 GCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAK 332
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KG P+ +T L+TG + A+ L+ MK++
Sbjct: 333 KGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 368
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 1/216 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G A + H +EM + G+ + L+ G + N R+F E K GI +
Sbjct: 175 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAAS 233
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I C G ++ EM + PN FG +L GF K+ D +
Sbjct: 234 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 293
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + + V +YNI I +L + E+A A+ + M +GI PN+ TY LI GF + G
Sbjct: 294 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 353
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
+ A L M G E D + + LC GE
Sbjct: 354 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 389
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + ++ AM E M K G+ +V N L+ G S ++ + E K G
Sbjct: 311 IDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM-KEKG 369
Query: 178 IEPNSETYNKVIKSFCESGDSSSVY 202
IE + TYN +I + C G+ S +
Sbjct: 370 IEADVVTYNVLIGALCCKGEESMTF 394
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L+ + N + A + EM + ++ SV N +++ + + + + F + G++
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYTFN-IMINVLCKEGKLKKAKDFVGHMETSGVK 253
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN ++ +C SG + +IL M+R+ I P++ +G L++G K+ + E+ K+
Sbjct: 254 PNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI 313
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + G+ +YN I C + A A D ML +GI P + TY LIH
Sbjct: 314 FEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFM 373
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
E + A+ + + G PD+ + + C+ + A + +A G P T
Sbjct: 374 EQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKT 433
Query: 360 MKSLVTGLASISKVAEANEL 379
SL+ L+ +++ EA++L
Sbjct: 434 YTSLLHVLSKKNRMKEADDL 453
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 4/272 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH G+ D + T M + + +L+ G EE +IF E +
Sbjct: 263 VHGYCSSGRVEAADAILTT---MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ P++ YN +I FC G+ + EM +K I P + + L+ + E + +
Sbjct: 320 -KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ +++ +++ GI+ YNI I C+ +++A L D ML+ GIKP TY L+
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
H K+ ++ A LF +T+ G PD+ F C + A ++ +
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T +++ G KV EA EL MK+R
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRR 530
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 2/249 (0%)
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
D+ G + S+ + L+ C +E F K G+ P ET N ++ F +
Sbjct: 144 DRLGFKSSI-VFDYLIKSCCDMNRADEAFECFYTM-KEKGVLPTIETCNSLLSLFLKLNR 201
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ + + + AEM R I+ + F +++ KE K + + ME G+ + YN
Sbjct: 202 TEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNT 261
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ C R E A A+L M + I+P+ TY LI G K+G LE A K+F M G
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P + + C G + A + KG P ST SL+ L + EA
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381
Query: 378 ELIGLMKKR 386
+I ++++
Sbjct: 382 CMIKEIQEK 390
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 143/333 (42%), Gaps = 37/333 (11%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S + + S++ EE+ + LR + + I + +D A
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM K G+ ++ N+L+ + + +E + + E + GI P++ TYN +I +C
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE-KGISPDAITYNILINGYC 407
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI----- 248
++ + + EM I+P + LL K+++ ++ + + + G+
Sbjct: 408 RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAI 467
Query: 249 ---------ASGVNV---------------------YNIRIQSLCKLKRSEEAKALLDGM 278
S NV +N +Q C+ + EEA+ L D M
Sbjct: 468 MFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM 527
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
RGIKP+ ++ LI G+ + G+++ A ++ M + G P + LC+ E
Sbjct: 528 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEG 587
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ A ++ + ++KG P +T +L+ G+A ++
Sbjct: 588 DLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ LA R + ++ F L+ ++ ++ + M++ G+ + N +
Sbjct: 135 IFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLS 194
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
KL R+E A L M IK ++ T+ +I+ KEG L+ AK M G +P
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKP 254
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + C G E A + + P T SL++G+ ++ EA+++
Sbjct: 255 NIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIF 314
Query: 381 -GLMKKRFPKSGDMWNAAL 398
+++K S ++N +
Sbjct: 315 EEMVQKGLRPSAVIYNTLI 333
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM+ + M G + N ++ G + + + + P YG PN+ YN V
Sbjct: 205 QAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPS-YGCTPNTVNYNTV 263
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K +G V ++AEM ++ P+ ++++ +E ++ ++L+ M K
Sbjct: 264 LKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDC 323
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + YN + LC+ + A LL M + G KPN+ TY L+ G E A+
Sbjct: 324 TANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAED 383
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L A M+ C PD F FLCQ G A++V + KG P+ T S++ GLA
Sbjct: 384 LMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLA 443
Query: 369 SISKVAEANELIGLMKKR 386
K+ ++ EL+ M +
Sbjct: 444 KTGKMEQSLELLNEMGSK 461
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 116/264 (43%), Gaps = 2/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q + A++ E+M K+ ++ NA++ G + + + + + G +PN
Sbjct: 304 QEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNM-QTDGCKPNI 362
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++K C + ++A+M + P+ F ++ ++ +V +
Sbjct: 363 FTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQ 422
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G Y+ I+ L K + E++ LL+ M S+G P ++ Y L +E
Sbjct: 423 MPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDK 481
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L A ++ + + G P + + LC+ G+ + A+ + ++ G +P ST
Sbjct: 482 LVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSI 541
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ GLA + EA EL+ + R
Sbjct: 542 LIQGLAHEGYMKEARELLSTLSSR 565
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 103/232 (44%), Gaps = 1/232 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D+A + + YG + N +L G + +E+V+ + E P+ T +
Sbjct: 238 VDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFS-ENCPPSEATLS 296
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI S C+ G +L +M + N + +++G ++ + +L M+
Sbjct: 297 VVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTD 356
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YNI ++ LC +R E+A+ L+ M P++ T+ +I ++G A
Sbjct: 357 GCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQA 416
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
++F M GC P+S + L + G+ E +L++ +KG+ P +
Sbjct: 417 VEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN 468
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 42/281 (14%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDH 129
P S+ +S L Q F +LLE++ ++ D N ++ V+ G + +D
Sbjct: 289 PPSEATLSVVISSLCQEGLFQRAIRLLEKM-SKHDCTAN--IVTYNAVVSGLCEQGHVDG 345
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK----------------------- 166
A+ M G + ++ N L+ G ++ +E+ +
Sbjct: 346 ALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIG 405
Query: 167 ------------RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
+F + P+ G PNS TY+ VI+ ++G +L EM K
Sbjct: 406 FLCQKGLTMQAVEVFKQMPE-KGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFN 464
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P ++ LL +E K + +++ ++ GI+ +YN + LC+ ++++A +
Sbjct: 465 PE-INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDI 523
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
L M+S G P+ TY LI G EG ++ A++L +++++
Sbjct: 524 LSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSS 564
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 124/260 (47%), Gaps = 1/260 (0%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L+ + N + A + EM + ++ SV N +++ + + + + F + G++
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYTFN-IMINVLCKEGKLKKAKDFVGHMETSGVK 253
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN ++ +C SG + +IL M+R+ I P++ +G L++G K+ + E+ K+
Sbjct: 254 PNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKI 313
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + G+ +YN I C + A A D ML +GI P + TY LIH
Sbjct: 314 FEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFM 373
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
E + A+ + + G PD+ + + C+ + A + +A G P T
Sbjct: 374 EQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKT 433
Query: 360 MKSLVTGLASISKVAEANEL 379
SL+ L+ +++ EA++L
Sbjct: 434 YTSLLHVLSKKNRMKEADDL 453
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 4/272 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH G+ D + T M + + +L+ G EE +IF E +
Sbjct: 263 VHGYCSSGRVEAADAILTT---MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ P++ YN +I FC G+ + EM +K I P + + L+ + E + +
Sbjct: 320 -KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD 378
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ +++ +++ GI+ YNI I C+ +++A L D ML+ GIKP TY L+
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLL 438
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
H K+ ++ A LF +T+ G PD F C + A ++ +
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T +++ G KV EA EL MK+R
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRR 530
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 2/249 (0%)
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
D+ G + S+ + L+ C +E F K G+ P ET N ++ F +
Sbjct: 144 DRLGFKSSI-VFDYLIKSCCDMNRADEAFECFYTM-KEKGVLPTIETCNSLLSLFLKLNR 201
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ + + + AEM R I+ + F +++ KE K + + ME G+ + YN
Sbjct: 202 TEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNT 261
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ C R E A A+L M + I+P+ TY LI G K+G LE A K+F M G
Sbjct: 262 IVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG 321
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P + + C G + A + KG P ST SL+ L + EA
Sbjct: 322 LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAE 381
Query: 378 ELIGLMKKR 386
+I ++++
Sbjct: 382 CMIKEIQEK 390
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S + + S++ EE+ + LR + + I + +D A
Sbjct: 290 DSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM K G+ ++ N+L+ + + +E + + E + GI P++ TYN +I +C
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE-KGISPDAITYNILINGYC 407
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ + + EM I+P + LL K+++ ++ + + + G+ V
Sbjct: 408 RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVI 467
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++N I C + A LL M + P+ T+ ++ G +EG +E A++LF M
Sbjct: 468 MFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM 527
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G +PD F + G+ + A +V + G+ P T +LV GL +
Sbjct: 528 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEG 587
Query: 374 AEANELIGLM 383
A EL+ M
Sbjct: 588 DLAEELLKEM 597
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 36/170 (21%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++MD+ + N ++ G EE + +F E K GI+P+ ++N +I
Sbjct: 485 AFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM-KRRGIKPDHISFNTLI 543
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ GD + + EM P
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPT--------------------------------- 570
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
V YN +Q LCK + + A+ LL M+S+G+ P+ TY LI G K
Sbjct: 571 --VLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ LA R + ++ F L+ ++ ++ + M++ G+ + N +
Sbjct: 135 IFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLS 194
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
KL R+E A L M IK ++ T+ +I+ KEG L+ AK M G +P
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKP 254
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + C G E A + + P T SL++G+ ++ EA+++
Sbjct: 255 NIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIF 314
Query: 381 -GLMKKRFPKSGDMWNAAL 398
+++K S ++N +
Sbjct: 315 EEMVQKGLRPSAVIYNTLI 333
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 2/226 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G SV A NA+LL LS R F + G+ PN TYN ++++ C G
Sbjct: 151 GYVPSVLAYNAVLLA--LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKE 208
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
SIL +MR PN + L+A F++ + + +++ MM + G+ + +N +
Sbjct: 209 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVN 268
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+CK + E+A+ + D M+ G+ P+ +Y L+ G+ K G A +FA MT G P
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 328
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
D F + +C+ G E A+ + R +G + T +L+ G
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDG 374
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 36/293 (12%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A + F+EM + GL + N L+ G + E +F E + GI P+
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ-KGIMPDV 330
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+ +I C++G+ +++ +MR + ++ N F L+ GF K+ +D ++
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK--- 299
M++C I V YN I C + R +EA+ LL M ++G+KP++ TY +I + K
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450
Query: 300 --------------------------------EGNLEGAKKLFASMTNGGCEPDSYCFFM 327
E L A LF +M G +PD + +
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ G E+AL + + G +P T L+ GL+ ++ EA +L+
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 111/257 (43%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+ M G+ +V N L+ + +E I + + G PN TYN ++
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDM-RGAGCGPNVVTYNTLV 232
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+F +G+ ++ MR ++PN F ++ G K K ED KV M + G+A
Sbjct: 233 AAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLA 292
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + CK S EA ++ M +GI P++ T+ LIH K GNLE A L
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + F C+ G + AL R P +L+ G
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCM 412
Query: 370 ISKVAEANELIGLMKKR 386
+ ++ EA EL+ M+ +
Sbjct: 413 VGRMDEARELLHEMEAK 429
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 101/250 (40%), Gaps = 1/250 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ +M G +V N L+ + + +R+ + G++PN T+N ++
Sbjct: 209 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM-REGGLKPNLVTFNSMV 267
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C++G + EM R+ + P+ + L+ G+ K + V M + GI
Sbjct: 268 NGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V + I +CK E A L+ M RG++ N T+ LI GF K+G L+ A
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M +P C+ C G + A ++ AKG P T ++++
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 447
Query: 370 ISKVAEANEL 379
A EL
Sbjct: 448 NCDTHSAFEL 457
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 141/356 (39%), Gaps = 50/356 (14%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + + +A + L+ +++ R L+ NE I + + +D A+
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRER-GLQMNEVTFTALIDGFCKKGFLDDALLA 387
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PKVY----------- 176
M + ++ SV NAL+ G + +E + + E P V
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 447
Query: 177 -----------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
G+ P++ TY+ +I+ C S + + M + ++P+
Sbjct: 448 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFT 507
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL---- 275
+ L+ G KE E + M K G+ V Y++ I L K R+ EA+ LL
Sbjct: 508 YTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 567
Query: 276 -----------DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
D ++ K L + L+ GF +G + A K++ SM + D
Sbjct: 568 HEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV 627
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + C+ G AL + + G+ P+ ++ SL+ GL V EA+++I
Sbjct: 628 YSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVI 683
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ Y+ +I C +G+ S +M + PN+T L+ G ++ + +V+
Sbjct: 624 DGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVI 683
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q ++ + C L +E +KAL+D L+ G N+D ++HG K+
Sbjct: 684 Q----------------QLLNYCSLADAEASKALIDLNLNEG---NVDAVLDVLHGMAKD 724
Query: 301 GNLEGAK 307
G L +
Sbjct: 725 GLLPSPR 731
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 81/212 (38%), Gaps = 17/212 (8%)
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
VL G+ + D A F+ M K GL+ +L+ G N E + + K G+
Sbjct: 479 VLCGEKRLSD-AHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA-GV 536
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL--------------- 223
P+ TY+ +I +S + +L ++ + P T + L
Sbjct: 537 LPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLAL 596
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L GF + + KV Q M +VY++ I C+ +A + ML G
Sbjct: 597 LKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGF 656
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
PN + LI G + G + A ++ + N
Sbjct: 657 APNSTSTISLIRGLFENGMVVEADQVIQQLLN 688
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 136/306 (44%), Gaps = 8/306 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
DR+ V+ + N + L++ E+ RPD+ + S+ + ++ A
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAI-IDSLC---KTRRVNDA 209
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F+E+ + G+R +V AL+ G S + + R+ + K I PN TY+ ++
Sbjct: 210 LDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIK-RKITPNVITYSALLD 268
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+F ++G I EM R SI P+ + L+ G + ++ ++ +M G
Sbjct: 269 AFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFP 328
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN I CK KR E+ L M RG+ N TY LI GF + G+++ A++ F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFF 388
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M + G PD + + + LC G E AL + T +++ G+
Sbjct: 389 SQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKT 448
Query: 371 SKVAEA 376
KV +A
Sbjct: 449 GKVEDA 454
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 136/316 (43%), Gaps = 10/316 (3%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMD 138
A+ K+ + + ++ + +E L R DL + +IV+ + + A+ +M
Sbjct: 94 AIVKMKKYDVVISLGKKMEVLGIRNDL------YTFNIVINCFCCCFQVSLALSVLGKML 147
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K G + +L+ G + + + ++ G P+ YN +I S C++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI-GYRPDIVAYNAIIDSLCKTRRV 206
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ E+ RK IRPN + L+ G ++ D ++L+ M K I V Y+
Sbjct: 207 NDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSAL 266
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ + K + EAK + + M+ I P++ TY LI+G ++ A ++F M + GC
Sbjct: 267 LDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
PD + C+ E +K+ R +G V + T +L+ G + V +A E
Sbjct: 327 FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE 386
Query: 379 LIGLMKKRFPKSGDMW 394
M F S D+W
Sbjct: 387 FFSQMDS-FGVSPDIW 401
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 3/262 (1%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ F EM K S+ N LL + K Y+ V + + +V GI + T+N V
Sbjct: 68 DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKM-EVLGIRNDLYTFNIV 126
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I FC S S+L +M + P+ G L+ GF + ++ D ++ M + G
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I SLCK +R +A + +GI+PN+ TY L++G G A +
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M P+ + + G+ A ++ + P T SL+ GL
Sbjct: 247 LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 369 SISKVAEANELIGLM--KKRFP 388
++ EAN++ LM K FP
Sbjct: 307 LHDRIDEANQMFDLMVSKGCFP 328
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 2/312 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A++ + L + N +E+ R +R N + + + + A +
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIG-RKGIRPNVVTYTALVNGLCNSGRWNDAARL 247
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M K + +V +ALL + + E K IF E ++ I+P+ TY+ +I C
Sbjct: 248 LRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRM-SIDPDIVTYSSLINGLC 306
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ M K P+ + L+ GF K + ED K+ + M + G+ +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTV 366
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN IQ ++ ++A+ M S G+ P++ TY L+ G G LE A +F M
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM 426
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ D + +C+ G+ E A + + KG P T ++++GL +
Sbjct: 427 QKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQ 486
Query: 374 AEANELIGLMKK 385
E L MK+
Sbjct: 487 HEVEALYTKMKQ 498
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 9/232 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A Q F+ M G V + N L+ G +K E+ ++F + + G+ N+ TYN
Sbjct: 311 IDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ-RGLVNNTVTYN 369
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ F + GD ++M + P+ + +LL G E + + M+K
Sbjct: 370 TLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKS 429
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + Y IQ +CK + E+A L + +G+KP++ TY ++ G +G
Sbjct: 430 EMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEV 489
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQG-GEYETALKVCRASMAKGWVPHF 357
+ L+ M G + LC G G+ + ++ + ++ G+ P
Sbjct: 490 EALYTKMKQEGLMKND-------SMLCLGDGDITISAELIKKMLSCGYAPSL 534
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 133/275 (48%), Gaps = 5/275 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A I+ FEE+ GL V + + L+ G + ++ ++F E K G+ ++
Sbjct: 563 KAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEM-KEQGLHLDT 621
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN VI FC+SG + Y +L EM+ K ++P +G ++ G K + ++ + +
Sbjct: 622 RAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 681
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ + V VY+ I K+ R +EA +L+ ++ +G+ PN T+ L+ K
Sbjct: 682 AKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEE 741
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A F +M N C P+ + + LC+ ++ A + +G P+ T +
Sbjct: 742 IDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTT 801
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
+++GLA + V EA +L +RF SG + ++A
Sbjct: 802 MISGLARVGNVLEAKDLF----ERFKSSGGIPDSA 832
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 2/252 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + L + +L E+K + L + R + I + ++ ++ A Q
Sbjct: 585 DVRSYSILIHGLVKGGFSKDTYKLFYEMKEQ-GLHLDTRAYNIVIDGFCKSGKVNKAYQL 643
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM GL+ +V +++ G +E +F E K ++ N Y+ +I F
Sbjct: 644 LEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSKAVDLNVVVYSSLIDGFG 702
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y IL E+ +K + PN + LL K + ++ Q M+
Sbjct: 703 KVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEV 762
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I + LCK+++ +A M +G+KPN TY +I G + GN+ AK LF
Sbjct: 763 TYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERF 822
Query: 314 TNGGCEPDSYCF 325
+ G PDS C+
Sbjct: 823 KSSGGIPDSACY 834
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 1/243 (0%)
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
S +A NALL+ ++N E +++I E + G P++ T +++ SF +S +
Sbjct: 130 HSPEAYNALLMLMARTRNLEYLEQILEEM-SMAGFGPSNNTCIEMVASFVKSRKLREAFG 188
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
++ MR+ RP + + L+ H+ + + +L+ M++ G V+++ I
Sbjct: 189 VIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFA 248
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+ R + A +LLD M S +L Y I FGK G ++ A K F + + G PD
Sbjct: 249 REGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDV 308
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
F LC+ + A+++ + VP +++ G S+ K EA L+
Sbjct: 309 TFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQ 368
Query: 384 KKR 386
K++
Sbjct: 369 KRK 371
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 136/302 (45%), Gaps = 5/302 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+A++ ++ L + ++LE +K D N + I + +A ++ A++ +
Sbjct: 378 IAYNCILTCLGRKGKVEEALRILEAMKM--DAAPNLTSYNILIDMLCKAGELEAALKVQD 435
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP-KVYGIEPNSETYNKVIKSFCE 194
M + GL ++ +N ++ ++ +E IF KV P+S T+ +I
Sbjct: 436 SMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKV--CTPDSVTFCSLIDGLGR 493
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G + Y + +M PNA + L+ F+K + ED K+ + M G + + +
Sbjct: 494 HGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLML 553
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
N + + K E+ +AL + + ++G+ P++ +Y LIHG K G + KLF M
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK 613
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G D+ + + C+ G+ A ++ KG P T S++ GLA I ++
Sbjct: 614 EQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLD 673
Query: 375 EA 376
EA
Sbjct: 674 EA 675
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 125/314 (39%), Gaps = 5/314 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A++ + +++ + + Q+LEE+ + + + + + ++ + A E
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEM-SMAGFGPSNNTCIEMVASFVKSRKLREAFGVIET 192
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K+ R + A L+ + + + + + ++ G E + +I F G
Sbjct: 193 MRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEI-GYEVTVHLFTTLICVFAREG 251
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ S+L EM+ S + + + + F K K + K ++ G+ +
Sbjct: 252 RVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFT 311
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I LCK +R +EA L + + S P + Y +I G+G G A L
Sbjct: 312 SMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRK 371
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
GC P + L + G+ E AL++ A M P+ ++ L+ L ++ A
Sbjct: 372 GCIPSVIAYNCILTCLGRKGKVEEALRILEA-MKMDAAPNLTSYNILIDMLCKAGELEAA 430
Query: 377 NELIGLMKKR--FP 388
++ MK+ FP
Sbjct: 431 LKVQDSMKEAGLFP 444
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A++ +EM+ G++ ++ + L+ G + K++ IF + K G
Sbjct: 95 INLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKD-G 153
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I+P+ YN +I +FC G + EM+++ +P F ++ GF ++ + +
Sbjct: 154 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 213
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V MM G V+ YN I L + ++ E+A+ +LD M G+ PN TY ++HG+
Sbjct: 214 DVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGY 273
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A F + + G + D Y + C+ G ++AL V + A+ +
Sbjct: 274 ASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 333
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A V EA +L+ MK+
Sbjct: 334 FIYNILIDGWARRGDVWEAADLMQQMKR 361
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 1/259 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I Y Q +D A EM++ G+ +D + ++ G + + ++ +F F K G
Sbjct: 25 IYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERF-KECG 83
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ TY +I + + G S + EM I+ N + +L+ GF K + +
Sbjct: 84 LNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAF 143
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ + + K GI V +YN I + C + + + A + M + KP T+ +IHGF
Sbjct: 144 AIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGF 203
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++G ++ A +F M GC P + + L + + E A ++ G P+
Sbjct: 204 ARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNE 263
Query: 358 STMKSLVTGLASISKVAEA 376
T +++ G AS+ +A
Sbjct: 264 HTYTTIMHGYASLGDTGKA 282
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 154/392 (39%), Gaps = 49/392 (12%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+LK +N F I + + P+ L + A + + + + +++ + +P
Sbjct: 135 KLKDWANAFAIFEDLIKDGIKPDVVLYNNIIT-AFCGMGKMDRAVCTVKEMQKQRHKPTT 193
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R +H G+ + A+ F+ M G +V NAL+LG + + E+ ++
Sbjct: 194 RTFMPI-IHGFARKGE---MKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQ 249
Query: 168 IFTEFPKVYGIEPNSETYNKV-----------------------------------IKSF 192
I E + G+ PN TY + +K+
Sbjct: 250 ILDEMT-LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKAC 308
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+SG S ++ EM ++I N + +L+ G+ + + ++Q M++ G+ +
Sbjct: 309 CKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDI 368
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y I + K + A ++ M S G+KPN+ TY LI+G+ + E A F
Sbjct: 369 HTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEE 428
Query: 313 MTNGGCEPDSYCFF-MFTYFL-----CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +PD + + T L G Y L VCR + T
Sbjct: 429 MKLSGLKPDRAVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKC 488
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
L I + E+ ++K FP + +++N L
Sbjct: 489 LLKIERT--GGEITEALQKTFPPNWNVYNNTL 518
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 105/241 (43%), Gaps = 6/241 (2%)
Query: 148 ALNALLLGCILSK-----NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+LNA++ G I+ N ++ + + E + GI+ + Y+ ++ + GD
Sbjct: 15 SLNAIIYGNIIYAYCQRCNMDKAEALVREMEE-EGIDAPIDIYHTMMDGYTMVGDEDKCL 73
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ + + P+ +G L+ + K K +V + ME GI + Y++ I
Sbjct: 74 LVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGF 133
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
KLK A A+ + ++ GIKP++ Y ++I F G ++ A M +P +
Sbjct: 134 LKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTT 193
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F + + GE + AL V G +P T +L+ GL K+ +A +++
Sbjct: 194 RTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDE 253
Query: 383 M 383
M
Sbjct: 254 M 254
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 117/316 (37%), Gaps = 40/316 (12%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNA 151
+S+ LE K +S+++ G + D +A FE++ K G++ V N
Sbjct: 104 VSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNN 163
Query: 152 LLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
++ C + K V + E K +P + T+ +I F G+ + MR
Sbjct: 164 IITAFCGMGKMDRAVCTV-KEMQKQRH-KPTTRTFMPIIHGFARKGEMKKALDVFDMMRM 221
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG------------------- 251
P + L+ G ++ K E ++L M G++
Sbjct: 222 SGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGK 281
Query: 252 ----------------VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V Y +++ CK R + A A+ M ++ I N Y LI
Sbjct: 282 AFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILID 341
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+ + G++ A L M G +PD + + F + G+ + A K + G P
Sbjct: 342 GWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKP 401
Query: 356 HFSTMKSLVTGLASIS 371
+ T +L+ G A S
Sbjct: 402 NVKTYTTLINGWARAS 417
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 86/204 (42%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ Y +I ++C+ + +++ EM + I + ++ G+ + V
Sbjct: 17 NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ++CG+ V Y I KL + +A + M GIK N+ TY LI+GF K
Sbjct: 77 ERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKL 136
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+ A +F + G +PD + C G+ + A+ + + P T
Sbjct: 137 KDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTF 196
Query: 361 KSLVTGLASISKVAEANELIGLMK 384
++ G A ++ +A ++ +M+
Sbjct: 197 MPIIHGFARKGEMKKALDVFDMMR 220
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 5/297 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDH 129
L+ ++F+I V+ L + N ++E++K P++ + G+ +
Sbjct: 153 LNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTL-IDGYCKMGRIGKMYK 211
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A +EM G+ + N L+ G +N R+F E + G+ PN TYN +I
Sbjct: 212 ADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQR-QGLRPNVVTYNILI 270
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C G ++ +M + PN +L+ GF K + + MEK G+
Sbjct: 271 NGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVD 330
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I + CK R E+A AL + M+ RGI P + TY LI G ++G+++ A+ L
Sbjct: 331 PNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSL 390
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M + D + + LC+ GE A+K+ KG P T +L+ G
Sbjct: 391 MNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDG 447
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 9/278 (3%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSK--NYEEVKRIFTE 171
+IV+ G + ++ A E+M +G+ +V N L+ G C + + + I E
Sbjct: 159 NIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKE 218
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
GI PN TYN +I FC+ + S + EM+R+ +RPN + +L+ G +
Sbjct: 219 MV-AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
K ++ + M + V +N+ I CK K EA L + M +G+ PN TY
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI + K+G +E A L+ M + G P+ + LC+ G+ + A + ++K
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
T L+ S+ K E+ + + L+ + F K
Sbjct: 398 KLSADVVTYNILID---SLCKKGESRKAVKLLDEMFEK 432
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM+ F EM + GLR +V N L+ G +E + + +EPN T+N
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVS-SDLEPNVVTHN 302
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC++ + ++ +M ++ + PNA + L+ + K+ + ED + MM
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI V+ YN I LC+ + A++L++ M+S+ + ++ TY LI K+G A
Sbjct: 363 GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKA 422
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KL M G P + C+ G AL V KG + T L+ G
Sbjct: 423 VKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKG 482
Query: 367 LASISKVAEANELIGLMKKR 386
++ +AN L+ M +R
Sbjct: 483 FCLKGRLEDANGLLNEMLER 502
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAM 131
+ + ++I + + + + ++ E++ R LR N ++I++ G + +D A+
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQ-RQGLRPN--VVTYNILINGLCSDGKVDEAV 283
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
++M L +V N L+ G +K E +F + K G++PN+ TY +I +
Sbjct: 284 ALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEK-QGVDPNAMTYTTLIDA 342
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C+ G +++ M + I P + + L+AG ++ + ++ M +++
Sbjct: 343 YCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSAD 402
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YNI I SLCK S +A LLD M +G+ P+ TY L+ G+ +EGNL A +
Sbjct: 403 VVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRT 462
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
M G + + + C G E A + + +G VP+ +T
Sbjct: 463 RMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTT 510
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN-- 216
+K Y +++ +F K + + + + SGDS V SILA+M + N
Sbjct: 45 TKKYSKIRSFLDKFVKY----EKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLK 100
Query: 217 ----------ATDFGL---------LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
A D+G LL+G KE + D+ V + M K I V +NI
Sbjct: 101 ILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNI 160
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF---GKEGNLEGAKKLFASMT 314
+ LCK+ + A +++ M G+ PN+ TY LI G+ G+ G + A + M
Sbjct: 161 VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMV 220
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G P+ + + C+ A++V +G P+ T L+ GL S KV
Sbjct: 221 AKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVD 280
Query: 375 EA 376
EA
Sbjct: 281 EA 282
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 1/171 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ++ A + M G+ V N L+ G + + + + E +
Sbjct: 343 YCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVS-KKLSA 401
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I S C+ G+S +L EM K + P+ + L+ G+ +E V
Sbjct: 402 DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVR 461
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
ME+ G + V +N+ I+ C R E+A LL+ ML RG+ PN TY+
Sbjct: 462 TRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYE 512
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 13/317 (4%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG- 122
+A PLD ++ ++ L + QLL++++ RP+L +S V+ G
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLI------TYSTVIDGL 205
Query: 123 -QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
+ +I A++ F + G+ V A N+L+ GC + E R+ T + I P+
Sbjct: 206 CKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVR-GNINPD 264
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
T+N ++ + C+ G + A M ++ +P+ + L+ GF + + ++
Sbjct: 265 DYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFN 324
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M K G+ V YN+ I CK+ +EA L + + + PNL TY LI G K G
Sbjct: 325 RMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLG 384
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ ++L M + G PD + +F C+ YE A+ + R + W P F
Sbjct: 385 RMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIW-PDFYMYD 443
Query: 362 SLVTGLASISKVAEANE 378
+V K+ A E
Sbjct: 444 VIVENFCKGEKLKIAEE 460
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F ++ G+ S+ L +L+ C + + G +PN T+N +I
Sbjct: 74 AISLFSQLHSKGITPSIATL-TILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLI 132
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC +G S + ++ K + +G L+ G K + D ++LQ ME+ +
Sbjct: 133 NGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVR 192
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+ I LCK + +A L + SRGI ++ Y LIHG G A +L
Sbjct: 193 PNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRL 252
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G PD Y F + LC+ G A V M +G P T +L+ G
Sbjct: 253 LTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCL 312
Query: 370 ISKVAEANELIGLMKKR 386
+ V+EA EL M KR
Sbjct: 313 SNNVSEARELFNRMVKR 329
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN TY+ VI C+ + + + + + I + + L+ G ++ +
Sbjct: 191 VRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREAT 250
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++L MM + I +NI + +LCK R EA+ + M+ RG KP++ TY L+ GF
Sbjct: 251 RLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGF 310
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
N+ A++LF M G EPD + + C+ + A+ + + K VP+
Sbjct: 311 CLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNL 370
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
+T SL+ GL + +++ EL+ M R
Sbjct: 371 ATYNSLIDGLCKLGRMSCVQELVDEMCDR 399
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 2/231 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+N + A + F M K GL V N L+ G +E +F E + + PN
Sbjct: 313 SNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEI-RCKNLVPNLA 371
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +I C+ G S V ++ EM + P+ + + L F K YE + + +
Sbjct: 372 TYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI 431
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ GI +Y++ +++ CK ++ + A+ L +L G PN+ TY +I+ K+ +
Sbjct: 432 VQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSF 490
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ A L + M + C PD+ F L + E + A K+ + +G V
Sbjct: 491 DEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 2/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A F M K G + + NAL+ G LS N E + +F K G+EP+ YN
Sbjct: 281 IVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVK-RGLEPDVLNYN 339
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ + E+R K++ PN + L+ G K + V +++ M
Sbjct: 340 VLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDR 399
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + YNI + + CK K E+A +L ++ +GI P+ Y ++ F K L+ A
Sbjct: 400 GQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKIA 458
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ + GC P+ + + LC+ ++ A+ + P T ++++
Sbjct: 459 EEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGA 518
Query: 367 LASISKVAEANEL 379
L ++ +A +L
Sbjct: 519 LQERNETDKAEKL 531
>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
mitochondrial-like [Cucumis sativus]
Length = 653
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G +++ + + M + G+ S+ N L+ G + S E +++F E I P
Sbjct: 195 FGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF-EVMDGGKIVP 253
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +IK +C++G +M K+++P+ + L+ Y E ++ +
Sbjct: 254 DTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLY 313
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME+ G+ + Y++ I LCK ++ EA A+ + M +G + N+ Y LI + K
Sbjct: 314 LEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKN 373
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++E A +LF M N G EPD+ + + LC+ G + +++ KG +
Sbjct: 374 GSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFY 433
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL ++ +A L M ++
Sbjct: 434 ASLIDGLGKAGRIEDAENLFEEMSEK 459
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A + AM+ F +M+ ++ L+ C ++++ ++ E + G+E
Sbjct: 265 YCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEE-RGLEI 323
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+Y+ VI C+ Y++ M +K R N + L+ + K E+ ++
Sbjct: 324 PPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLF 383
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ G Y++ + LCK R ++ L D ++G+ N Y LI G GK
Sbjct: 384 ERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKA 443
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G +E A+ LF M+ GC DSYC+ L + G+ + AL + +G T
Sbjct: 444 GRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTF 503
Query: 361 KSLVTGLASISKVAEA 376
L+ GL K EA
Sbjct: 504 TILIDGLFKEHKNEEA 519
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 4/268 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +S+V+ G + A FE M++ G R +V AL+ + + EE R+F E
Sbjct: 326 HSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLF-E 384
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G EP++ TY+ ++ C+SG + R K + NA + L+ G K
Sbjct: 385 RMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAG 444
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ ED + + M + G A YN I +L K + ++A AL M G + T+
Sbjct: 445 RIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFT 504
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G KE E A K + M + G P F LC G+ A K+
Sbjct: 505 ILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPM 564
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANEL 379
G +P + + ++ L ++ EA +L
Sbjct: 565 GIIPE-TAFEDMINTLCKAQRIKEACKL 591
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 3/244 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S+ V+ L ++ + +L + + + + N F+ I G+A I+ A
Sbjct: 394 DAVTYSVLVNGLCKSGRLDDGMELFDFCRNK-GVAINAMFYASLIDGLGKAGRIEDAENL 452
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEEM + G + NA++ ++ +F + G + T+ +I
Sbjct: 453 FEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEE-EGCDQTVYTFTILIDGLF 511
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +M K I P F L G K K+L + GI
Sbjct: 512 KEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPETA 571
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++ I +LCK +R +EA L DG++ RG + LI+ K GN + KL S
Sbjct: 572 FEDM-INTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSK 630
Query: 314 TNGG 317
G
Sbjct: 631 IGIG 634
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 109/270 (40%), Gaps = 7/270 (2%)
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+L G +NM +H + +F K+ ++ S + + +L L + E R F K
Sbjct: 90 LLDGSSNM-EHNLDSF--CRKFFVKLSPNFVTFVLQSVELREKPEVAVRFFFWAGKQKKY 146
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
E + +I+ S D + + E++ + + + L+ F E++
Sbjct: 147 VHKIECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLW 206
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V + M++ GI + YN + L E A+ + + M I P+ TY +I G+
Sbjct: 207 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 266
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW--VPH 356
K G L+ A + F M +PD + +++T L + +G PH
Sbjct: 267 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 326
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
++ ++ GL K EA + M ++
Sbjct: 327 SYSL--VIGGLCKQRKCMEAYAVFETMNQK 354
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 136/307 (44%), Gaps = 1/307 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D+ ++ +S + ++ +E+ T+ ++ + + I Y +D A+Q
Sbjct: 182 DKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQY 241
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E+M + G+ +V N L+ + + + E K G P+ TYN +I +C
Sbjct: 242 REDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQK-NGFSPDVFTYNILINGYC 300
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G+ + EM +K +R A + L+ F ++ + ++ ++ + K GI V
Sbjct: 301 KEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVV 360
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I S C E A ++ M + I P+ TY L+ GF G L+ A+ L M
Sbjct: 361 MYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEM 420
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
T G +PD + G+ + AL+V M KG+ P T +L+ GL I +
Sbjct: 421 TKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQG 480
Query: 374 AEANELI 380
+A L+
Sbjct: 481 DDAENLM 487
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 36/240 (15%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ FEEM + G+R + +L+ +E R+F K GI P+ YN +I
Sbjct: 308 ALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK-KGIRPDVVMYNALI 366
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C GD Y I+AEM +K I P+ + L+ GF
Sbjct: 367 NSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGF---------------------- 404
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
C L R +EA+ L+D M RGI+P+L +Y LI G+ +G+++ A ++
Sbjct: 405 -------------CLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + G P + LC+ + + A + + +AKG P ST SL+ GL +
Sbjct: 452 RDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTT 511
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 3/290 (1%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGC 156
LE L+ P R N + I + + A++ EM ++ G+ L+ G
Sbjct: 136 LELLRQMP--RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGW 193
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
E+ ++F E + P++ YN +I +C+ G +M ++ I
Sbjct: 194 CKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMT 253
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ LL+ + + + D VL+ M+K G + V YNI I CK ++A + +
Sbjct: 254 VATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFE 313
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M +G++ TY LI+ F ++G ++ +LF G PD + C GG
Sbjct: 314 EMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGG 373
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ E A ++ K P T +L+ G + ++ EA LI M KR
Sbjct: 374 DMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 38/254 (14%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMR-RKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN+ TYN VI FC G + ++ EMR R I P+ + L++G+ K + ED K
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204
Query: 239 VL-QMMEK-----------------C------------------GIASGVNVYNIRIQSL 262
V +M+ K C GIA V YN+ + +L
Sbjct: 205 VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
R+ +A A+L+ M G P++ TY LI+G+ KEGN + A ++F M+ G +
Sbjct: 265 FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATA 324
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ Y + G+ + ++ ++ KG P +L+ + + A E++
Sbjct: 325 VTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAE 384
Query: 383 M-KKRFPKSGDMWN 395
M KKR P +N
Sbjct: 385 MEKKRIPPDDMTYN 398
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL- 240
+ T+N +++ C +G +L R+ RPNA + ++AGF + + +V+
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELL----RQMPRPNAVTYNTVIAGFCARGRVQAALEVMR 171
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIHGFGK 299
+M E+ GIA Y I CK+ R E+A + D ML++G + P+ Y LI G+
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G L+ A + M G + + + L A V G+ P T
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT 291
Query: 360 MKSLVTG 366
L+ G
Sbjct: 292 YNILING 298
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSI---LAEMRRKSIRPNATDFGLLLAGFYKE 230
K +G+ P+ TYN +I +C+ G + ++Y + L EM I P A FG+L+ G+ K
Sbjct: 218 KAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKN 277
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+V + M++ GIA+ V YN I LC + EE L++ M G+ PN T+
Sbjct: 278 SNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITF 337
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
++ GF K+G + A MT EPD + + + G+ E A+ V A
Sbjct: 338 GCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAK 397
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KG P+ +T L+TG + A+ L+ MK++
Sbjct: 398 KGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 2/264 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G NM H +EM + G+ + L+ G + N R+F E K GI +
Sbjct: 241 GAGNMY-HVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM-KQQGIAAS 298
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I C G ++ EM + PN FG +L GF K+ D +
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + + V +Y I I +L + E+A A+ + M +GI PN+ TY LI GF + G
Sbjct: 359 GMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A L M G E D + + LC GE A+K+ G P+ T
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYN 478
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
+++ G + A E+ M+K
Sbjct: 479 TIIQGFCDKGNIKSAYEIRTRMEK 502
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ FEEM + G+ SV N+L+ G EE ++ E + G+ PN T+ V+
Sbjct: 283 AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDL-GLSPNEITFGCVL 341
Query: 190 KSFCESG---DSSS---------------VYSILAE-----------------MRRKSIR 214
K FC+ G D++ +Y+IL + M +K I
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGIS 401
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PN T + L+ GF + + +L M++ GI + V YN+ I +LC +A L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
LD M G++PN TY +I GF +GN++ A ++ M + + +F + CQ
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G+ + A + + K VP+ T +++ G+
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 115 VHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+++I++ Y + ++ AM E M K G+ +V N L+ G S ++ + E
Sbjct: 371 IYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEM 430
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K GIE + TYN +I + C G+ +L EM + PN + ++ GF +
Sbjct: 431 -KEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ ++ MEKC + V YN+ I+ C++ + +EA LL+ ML + + PN TY+
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549
Query: 293 LIHGFGKEG 301
+ G ++G
Sbjct: 550 IKEGMMEKG 558
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R+ + P+ F +++G + + G V + ++ G+A V YN I CK +
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243
Query: 270 ---EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
LL M+ GI P T+ LI+G+ K N A ++F M G +
Sbjct: 244 NMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN 303
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC G+ E +K+ G P+ T ++ G +A+AN+ I M +R
Sbjct: 304 SLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTER 363
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 3/170 (1%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
RP+ + LLAG + + K + + ++ + +N I LC++ + +A
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGF---GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
+ + + G+ P++ TY LI G+ G GN+ L M G P + F +
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ A++V +G T SL++GL S KV E +L+
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++ ++ S++ + + S LL+E+K + ++V L + + A++ +EM
Sbjct: 407 YNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE-VRKAVKLLDEM 465
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ GL + N ++ G N + I T K N TYN IK FC+ G
Sbjct: 466 SEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK-RANVVTYNVFIKYFCQIGK 524
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
+L EM K + PN + + G ++ D+
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDI 563
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 133/309 (43%), Gaps = 37/309 (11%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++I V LS A + + +++E+K + ++ + + I Y +A + A + F+E
Sbjct: 205 YTILVDSLSTAGDISKVEAVVDEMKAK-NVAGDVYLYTAVINAYCRAGNVRRASEVFDE- 262
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
C+ + GIEPN TY +I FC+ G
Sbjct: 263 ------------------CVGN-----------------GIEPNERTYGVLINGFCKIGQ 287
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ +LA+M+ + + N F ++ G+ ++ ++ KV MEK GI V YN
Sbjct: 288 MEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNT 347
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
LC++ R EAK LL M+ +G+ PN TY LI KEG++ A++LF M G
Sbjct: 348 LACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKG 407
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P + + + G A + + KG VP T SLV G KV A
Sbjct: 408 AMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVAL 467
Query: 378 ELIGLMKKR 386
+L MK R
Sbjct: 468 KLFEEMKHR 476
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 8/269 (2%)
Query: 58 ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
+ D C G + P + + + ++ + A LL +++ R + N+
Sbjct: 259 VFDECVGNGIEP----NERTYGVLINGFCKIGQMEAAEMLLADMQGR-GVGHNQIIFNTM 313
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVY 176
I Y + M+D+A++ M+K G+ V N L G C +++ E + K
Sbjct: 314 IDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK-- 371
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TY +I C+ GD + EM K P+ + +++ G+ K+ +
Sbjct: 372 GVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREA 431
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + MEK G+ V Y + C + + A L + M RG +PN+ Y LI G
Sbjct: 432 ERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISG 491
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
KEG E A +L+ M G PD +
Sbjct: 492 LAKEGRSEEAFQLYDDMLKAGLTPDDSLY 520
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
S+V+ G ++ +D A +EM ++G+R + N+LL + K+ V+ + E +
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELL-EIME 194
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
GIE TY ++ S +GD S V +++ EM+ K++ A D L A +
Sbjct: 195 NGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNV---AGDVYLYTAVINAYCRAG 251
Query: 235 DVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+V + ++ ++C GI Y + I CK+ + E A+ LL M RG+ N +
Sbjct: 252 NVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFN 311
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
+I G+ ++G ++ A K+ A+M G E D Y + LC+ A + + K
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371
Query: 352 GWVPHFSTMKSLVT 365
G P++ T +L++
Sbjct: 372 GVPPNYVTYTTLIS 385
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 3/240 (1%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A + ++ G S ++ + + E P+ +G+ N+ YN ++ + D + V +L
Sbjct: 134 AASVVVDGFCKSGRVDDARALLDEMPR-HGVRLNALCYNSLLDCYVRRKDDARVQELLEI 192
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M I + +L+ V V+ M+ +A V +Y I + C+
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
A + D + GI+PN TY LI+GF K G +E A+ L A M G + F
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312
Query: 328 FTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G + ALKV +A+M K G T +L GL ++++AEA L+ +M ++
Sbjct: 313 MIDGYCRQGMVDNALKV-KAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 2/227 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G SV A NA+LL LS R F + G+ PN TYN ++++ C G
Sbjct: 118 GYAPSVLAYNAVLLA--LSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKE 175
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
S+L +MR PNA + L+A F + + + +++ MM + G+ + +N +
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+CK R E+A+ + D M+ G+ P+ +Y L+ G+ K G A +FA MT G P
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
D F + +C+ G E A+ + R +G + T +L+ G
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGF 342
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 3/245 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPN 181
+A ++ A + F+EM K GL + N L+ G C + ++E + +F E + GI P+
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALS-VFAEMTR-KGIMPD 296
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
T+ +I C++G+ ++ EMR + ++ N F L+ GF K+ +D ++
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M +C I V YN I C + R +EA+ L+ M ++G+KP++ TY ++ + K G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A +L M G PD+ + LC+ A + + ++ G P T
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476
Query: 362 SLVTG 366
SL+ G
Sbjct: 477 SLIDG 481
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+ M G+ +V N L+ + +E + + + G +PN+ TYN ++
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDM-RGAGCDPNAVTYNTLV 199
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC +G+ ++ MR ++PN F ++ G K + ED KV M K G+A
Sbjct: 200 AAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLA 259
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + CK+ S EA ++ M +GI P++ T+ LIH K GNLE A L
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL 319
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + F C+ G + AL R P +L+ G
Sbjct: 320 VREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCM 379
Query: 370 ISKVAEANELIGLMKKR 386
+ ++ EA EL+ M+ +
Sbjct: 380 VGRMDEARELVREMEAK 396
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 121/280 (43%), Gaps = 1/280 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + A+ F EM + G+ V +L+ + N E + E + G++
Sbjct: 272 YCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREM-RERGLQM 330
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T+ +I FC+ G + EMR+ I+P+ + L+ G+ + ++ +++
Sbjct: 331 NEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELV 390
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME G+ V Y+ + + CK + A L ML G+ P+ TY LI +E
Sbjct: 391 REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEE 450
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L A LF +M + G +PD + C+ G E AL + + G +P T
Sbjct: 451 KRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTY 510
Query: 361 KSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAALPR 400
L+ GL+ ++ EA L+ + P ++ AL R
Sbjct: 511 SVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR 550
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 1/237 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ +M G + N L+ + + +R+ + + G++PN T+N V+
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL-VDMMREGGLKPNLVTFNSVV 234
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C++G + EM ++ + P+ + L+ G+ K + V M + GI
Sbjct: 235 NGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V + I +CK E A L+ M RG++ N T+ LI GF K+G L+ A
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLA 354
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M +P C+ C G + A ++ R AKG P T ++++
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSA 411
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 125/334 (37%), Gaps = 87/334 (26%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + + +A + L+ E++ R L+ NE I + + +D A+
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRER-GLQMNEITFTALIDGFCKKGFLDDALLA 354
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM + ++ SV NAL+ G + +E + + E + G++P+ TY+ ++ ++C
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM-EAKGVKPDVVTYSTILSAYC 413
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDF--------------------------GL----- 222
++GD+ S + + +M + P+A + GL
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473
Query: 223 ----LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK------ 272
L+ G KE E + M K G+ V Y++ I L K R++EA+
Sbjct: 474 TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533
Query: 273 ----------------------------ALLDGMLSRGIKP--------------NLD-- 288
ALL G +G+ NLD
Sbjct: 534 YHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGS 593
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
Y LIHG +EGN+ A M G P+S
Sbjct: 594 VYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNS 627
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 19/127 (14%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ Y+ +I C G+ S +M + PN+T L+ G +++ + +V+
Sbjct: 591 DGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVI 650
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q + C C L +E +KAL+D L G N+D ++HG ++
Sbjct: 651 QQLLNC----------------CSLADAEASKALIDLNLKEG---NVDAVLDVLHGMARD 691
Query: 301 GNLEGAK 307
G L +
Sbjct: 692 GLLPSPR 698
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 1/291 (0%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
++L E++ + +E + I Y + + A++ +EM K GL+ ++ N+L+ G
Sbjct: 157 KVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLING 216
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+ E +R+ K+ ++P+S +Y ++ +C G SS +++ +M RK I P
Sbjct: 217 YCKNGQVHEGERLLMCMRKL-DLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEP 275
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ LL G + Y+D ++ +M + G+ Y + L K+ A L
Sbjct: 276 TVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLW 335
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
D +L+RGI ++ + +I+G K G ++GAK+ F M GC+PD + + C+
Sbjct: 336 DDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKV 395
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G E A K+ + P SL+ GL + K+++ +L+ M R
Sbjct: 396 GNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTR 446
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 130/302 (43%), Gaps = 35/302 (11%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN-------YEEVKR----- 167
+Y + M+ +A+ F+ M KYG + S+ + N+LL + Y++++R
Sbjct: 5 VYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVP 64
Query: 168 -IFT------------------EFPK---VYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
+FT EF + G E N+ +YN ++ + GD +L
Sbjct: 65 DVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVL 124
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGIASGVNVYNIRIQSLCK 264
M K + N LL+ G+ K+ K E+ KVL+ MEK G+ Y I CK
Sbjct: 125 KFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCK 184
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ + +A + D ML G+K NL LI+G+ K G + ++L M +PDSY
Sbjct: 185 VGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYS 244
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ C+ G A VC + KG P T +L+ GL +A L LM
Sbjct: 245 YCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLML 304
Query: 385 KR 386
+R
Sbjct: 305 QR 306
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 4/254 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A + M + G+ ++ L L+ G EE +++ E K G+ + Y
Sbjct: 117 IEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYG 176
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ G + EM + ++ N L+ G+ K + + ++L M K
Sbjct: 177 ALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKL 236
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ Y + C+ S +A + D ML +GI+P + TY L+ G + G+ + A
Sbjct: 237 DLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDA 296
Query: 307 KKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+L+ M G P+ YC + F + G++ AL + +A+G +++
Sbjct: 297 LRLWHLMLQRGVTPNEVGYCTLLDGLF--KMGDFSRALTLWDDILARGINKSIYAFNTMI 354
Query: 365 TGLASISKVAEANE 378
GL + ++ A E
Sbjct: 355 NGLCKMGEMDGAKE 368
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 83/212 (39%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ YN + C+SG + + S P+ + L+ GF + +
Sbjct: 555 PNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNL 614
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M G+ + YN + LCK + A+ L D + +G+ PN+ TY LI G+ K
Sbjct: 615 RDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCK 674
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G+ A L M G P + C+ + E A+K+ A +T
Sbjct: 675 SGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIAT 734
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
LV G V + ++L +M P +G
Sbjct: 735 FSKLVEGCIQHGDVKKMSKLHNMMHMACPSAG 766
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 111/278 (39%), Gaps = 1/278 (0%)
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
DL+ + + + Y + + A ++M + G+ +V N LL G +Y++
Sbjct: 237 DLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDA 296
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
R++ + G+ PN Y ++ + GD S ++ ++ + I + F ++
Sbjct: 297 LRLWHLMLQ-RGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMIN 355
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G K + + + + ME+ G Y CK+ EEA + + M I P
Sbjct: 356 GLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFP 415
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+++ Y LI G + L A M G P+ + C G + A
Sbjct: 416 SIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAY 475
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ KG+ P+ +V+ L + ++ EAN L+ M
Sbjct: 476 FEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 513
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TYN ++ C+SG + ++ K + PN + +L+ G+ K +
Sbjct: 622 GLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREA 681
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M K GI+ + Y+ I CK EEA LL+ M + + + T+ L+ G
Sbjct: 682 LDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEG 741
Query: 297 FGKEGNLEGAKKLFASM 313
+ G+++ KL M
Sbjct: 742 CIQHGDVKKMSKLHNMM 758
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ A ++ A +EM GL ++ NALL G S + +R+F + + G+ P
Sbjct: 602 FSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKL-HLKGLIP 660
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +I +C+SG + +M ++ I P+ + L+ GF K+ E+ K+L
Sbjct: 661 NVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLL 720
Query: 241 QMMEKCGIASGVNVYN 256
M+ + + ++
Sbjct: 721 NEMKASNVDQTIATFS 736
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ ++++ G+ +S+ A N ++ G + K F ++ G +P+ TY +
Sbjct: 330 RALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEEL-GCKPDGITYRTL 388
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+C+ G+ + I +M ++ I P+ + L+ G + K + +L M+ G+
Sbjct: 389 SDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGL 448
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ V Y I C R ++A + M+ +G PN+ ++ + G ++ A
Sbjct: 449 SPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANM 508
Query: 309 LFASMTNGGCEPDSYCF 325
L M + D C
Sbjct: 509 LLQKMVDFDLVLDHRCL 525
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 13/194 (6%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL 120
G S +P D + + S A + N L +E+ + P++ ++ +L
Sbjct: 582 GLSHGSFTP-DNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNIT------TYNALL 634
Query: 121 YG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
G ++ +D A + F+++ GL +V N L+ G S + E + + K GI
Sbjct: 635 NGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLK-EGI 693
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ TY+ +I FC+ D +L EM+ ++ F L+ G + + + K
Sbjct: 694 SPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSK 753
Query: 239 VLQMMEKCGIASGV 252
+ MM ++G+
Sbjct: 754 LHNMMHMACPSAGI 767
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 7/314 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P R A + L Q N A ++L+E+ R ++ + + + + + +D A
Sbjct: 133 PPHRRAAAGRTWALCQNNRVGAARKMLDEM-ARKGCPPDDVTYATIVSVLCKLDRLDEAT 191
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ M + NA++L +EV + ++ G++PN TY ++ +
Sbjct: 192 EVLAAMPPVAA-----SYNAIVLALCREFRMQEVFSVVSDMVG-RGLQPNVITYTTIVDA 245
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC++G+ +ILA M PN F L+ G + + + D + + M G A
Sbjct: 246 FCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 305
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
YNI I+ LC + + A ++L+ M G PN+ TY LI GF K G+L GA ++
Sbjct: 306 TVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWN 365
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M+ GC+P+ + C+ + A + + + P+ T +L+ L
Sbjct: 366 DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCR 425
Query: 372 KVAEANELIGLMKK 385
+V A + M++
Sbjct: 426 RVGRALGVFHEMRR 439
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 139/334 (41%), Gaps = 35/334 (10%)
Query: 60 DICCGASL--APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
D CGA AP + A AV +L+ A + + L+E++ R + E V +
Sbjct: 38 DPLCGAGPPPAPGTGDAARAHEAAVRRLAAAGDVDGVQLALQEMRLR-GVPCTEGALVAA 96
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+ + +A D A++TF R D LGC ++
Sbjct: 97 VGAFARAGAPDRALKTF-------YRAVHD------LGCARPHRAAALQ----------- 132
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ + C++ + +L EM RK P+ + +++ K + ++
Sbjct: 133 -PPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEAT 191
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+VL M + YN + +LC+ R +E +++ M+ RG++PN+ TY ++ F
Sbjct: 192 EVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAF 246
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G L A + A M GC P+ F L G AL + R +A+GW P
Sbjct: 247 CKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPST 306
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR--FPK 389
+ L+ GL S+ + A+ ++ M++ FP
Sbjct: 307 VSYNILIRGLCSVGDLKGASSILNSMEQHGCFPN 340
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 2/292 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++++I + L S +L ++ N R + I + +A + A+ +
Sbjct: 307 VSYNILIRGLCSVGDLKGASSILNSMEQH-GCFPNVRTYSTLIDGFSKAGDLGGAISIWN 365
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M + G + +V ++ + + K + + + PN+ T+N +I+S C+
Sbjct: 366 DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM-LLENCPPNTVTFNTLIRSLCDC 424
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ EMRR PN + L+ G ++E D ++ M+ GI + Y
Sbjct: 425 RRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTY 484
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + LC+ + S EA + M+ +GI+PN T+ +IH + KEG + A + +M
Sbjct: 485 NTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNV 544
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
C + + + LC + A+ + +G P+ T LV G+
Sbjct: 545 VNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 5/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ + M G S + N L+ G + + I + +G PN TY+
Sbjct: 287 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQ-HGCFPNVRTYS 345
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ--MME 244
+I F ++GD SI +M R +PN + ++ F K+ + ++ ++E
Sbjct: 346 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 405
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
C +N I+SLC +R A + M G PN TY LIHG +EGN
Sbjct: 406 NC--PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 463
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M + G E + LCQ A+ + +G P+ T +++
Sbjct: 464 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 523
Query: 365 TGLASISKVAEANELIGLMK 384
+V A ++G M
Sbjct: 524 HAYCKEGEVRMAAWMLGAMN 543
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ ++M+K + V ++ KN + +FTE GI PN TYN
Sbjct: 220 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN-KGIRPNVVTYN 278
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ C G S +L++M + I PN F L+ F KE K + K+ M K
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + Y+ I C R +EAK + + M+S+ PN+ TY LI GF K +E
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M+ G ++ + L Q G+ + A K+ + ++ G P T L+ G
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 458
Query: 367 LASISKVAEA 376
L K+ +A
Sbjct: 459 LCKYGKLEKA 468
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ F EMD G+R +V N+L+ + + R+ ++ + I PN T++
Sbjct: 255 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFS 313
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F + G + EM ++SI P+ + L+ GF + ++ + ++M
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I+ CK KR EE L M RG+ N TY LI G + G+ + A
Sbjct: 374 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 433
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+K+F M + G PD + + LC+ G+ E AL V P T ++ G
Sbjct: 434 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 493
Query: 367 LASISKVAEANEL 379
+ KV + +L
Sbjct: 494 MCKAGKVEDGWDL 506
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 106/266 (39%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I A+ ++M + + N L+ G L E + G +P
Sbjct: 144 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQP 202
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY V+ C+ GD S+L +M + I + + ++ D +
Sbjct: 203 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 262
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ GI V YN I+ LC R +A LL M+ R I PN+ T+ LI F KE
Sbjct: 263 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 322
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KL+ M +PD + + C + A + ++K P+ T
Sbjct: 323 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 382
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V E EL M +R
Sbjct: 383 NTLIKGFCKAKRVEEGMELFREMSQR 408
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A FE M +V N L+ G +K EE +F E + G+ N+ TYN
Sbjct: 360 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYN 418
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ ++GD I +M + P+ + +LL G K K E V + ++K
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YNI I+ +CK + E+ L + +G+KPN+ Y +I GF ++G E A
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 538
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M G P+S + + G+ + ++ + + G+V ST+ ++
Sbjct: 539 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 598
Query: 367 L 367
L
Sbjct: 599 L 599
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 10/323 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + L + N L E+ RP++ + + YG+ + A
Sbjct: 238 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL-IRCLCNYGRWS---DA 293
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +M + + +V +AL+ + E ++++ E K I+P+ TY+ +I
Sbjct: 294 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLIN 352
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + M K PN + L+ GF K + E+ ++ + M + G+
Sbjct: 353 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 412
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN IQ L + + A+ + M+S G+ P++ TY L+ G K G LE A +F
Sbjct: 413 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 472
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ EPD Y + + +C+ G+ E + + KG P+ ++++G
Sbjct: 473 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 532
Query: 371 SKVAEANELIGLMKK--RFPKSG 391
EA+ L MK+ P SG
Sbjct: 533 GLKEEADALFREMKEDGTLPNSG 555
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 1/256 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + ++EM K + + ++L+ G + +E K +F E PN TYN +
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTL 385
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
IK FC++ + EM ++ + N + L+ G ++ + K+ + M G+
Sbjct: 386 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 445
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y+I + LCK + E+A + + + ++P++ TY +I G K G +E
Sbjct: 446 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 505
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF S++ G +P+ + C+ G E A + R G +P+ T +L+
Sbjct: 506 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 565
Query: 369 SISKVAEANELIGLMK 384
A + ELI M+
Sbjct: 566 RDGDKAASAELIKEMR 581
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EM + S+ N LL I N ++ E + I + +YN
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLL-SAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC ++L +M + P+ LL G+ + + ++ M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+N I L ++ EA AL+D M++RG +P+L TY +++G K G+++ A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G E D + LC AL + KG P+ T SL+
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283
Query: 367 LASISKVAEANELIGLMKKR 386
L + + ++A+ L+ M +R
Sbjct: 284 LCNYGRWSDASRLLSDMIER 303
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A ++ M+ F EM + GL + N L+ G + + + ++IF + G+ P
Sbjct: 389 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPP 447
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ ++ C+ G + +++ + P+ + +++ G K K ED +
Sbjct: 448 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 507
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V +Y I C+ EEA AL M G PN TY LI ++
Sbjct: 508 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 567
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
G+ + +L M + G D+ M L G
Sbjct: 568 GDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 602
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 85/210 (40%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP+ T + ++ +C S +++ +M +PN F L+ G + +K +
Sbjct: 129 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 188
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M G + Y + LCK + A +LL M I+ ++ Y +I
Sbjct: 189 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 248
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
N+ A LF M N G P+ + LC G + A ++ + + P+
Sbjct: 249 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 308
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K+ EA +L M KR
Sbjct: 309 VVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 1/233 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM G+ + N L+ G KN ++F E + G++PN TYN +I C
Sbjct: 203 LKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNR-QGVKPNVVTYNSLINGLC 261
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G + ++ +M + PN LL GF K + G++ + M K I V
Sbjct: 262 NNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVT 321
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI I + CK + E+A AL ML +G+ P++ TY LI G ++G+LEGA+ + M
Sbjct: 322 TYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEM 381
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ D + + LC GE + L++ KG P T +++ G
Sbjct: 382 DTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDG 434
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+IL EM+ I PN F +L+ GF + KV M + G+ V YN I L
Sbjct: 201 AILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGL 260
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + EA L D M++ ++PN+ T+ L++GF K ++ A +LF M P+
Sbjct: 261 CNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNV 320
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ + C+ E A + R + KG P ST L+ GL
Sbjct: 321 TTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLC 366
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A ++M L ++ NALL G +K ++ +F + PK I PN TYN
Sbjct: 266 VNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPK-QRITPNVTTYN 324
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I ++C+ + +++ M K + P+ + + L+ G ++ E + M+
Sbjct: 325 ILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTK 384
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ + + YNI + SLC ++ LLD M +G+KP+ TY +I G+ KEGNL
Sbjct: 385 HLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNL 441
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
L + +A A+L M + GI PN T+ LI GF + N+ A K+FA M G +P+
Sbjct: 193 LVKMYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVT 252
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWV-PHFSTMKSLVTGLASISKVAEANELIGLM 383
+ LC G+ A + R M + P+ T +L+ G V +A EL M
Sbjct: 253 YNSLINGLCNNGKVNEATTL-RDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDM 311
Query: 384 KKR 386
K+
Sbjct: 312 PKQ 314
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 2/226 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G SV A NA+LL LS R F + G+ PN TYN +I++ C G
Sbjct: 111 GYVPSVLAYNAVLLA--LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKE 168
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
SIL +MR PN + L+A F++ + + +++ MM G+ + +N +
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+CK + E+A+ + D M+ G+ P+ +Y L+ G+ K G A +FA MT G P
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
D F + +C+ G E A+ + R +G + T +L+ G
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDG 334
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 36/293 (12%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A + F+EM + GL + N L+ G + E +F E + GI P+
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ-KGIMPDV 290
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+ +I C++G+ +++ +MR + ++ N F L+ GF K+ +D ++
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK--- 299
M +C I V YN I C + R +EA+ LL M ++G+KP++ TY +I + K
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410
Query: 300 --------------------------------EGNLEGAKKLFASMTNGGCEPDSYCFFM 327
E L A LF +M G +PD + +
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ G E AL + + G +P T L+ GL+ ++ EA +L+
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+ M G+ +V N L+ + +E I + + G PN TYN ++
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDM-RGAGCGPNVVTYNTLV 192
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+F +G+ ++ M ++PN F ++ G K K ED KV M + G+A
Sbjct: 193 AAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLA 252
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + CK S EA ++ M +GI P++ T+ LIH K GNLE A L
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + F C+ G + AL R P +L+ G
Sbjct: 313 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCM 372
Query: 370 ISKVAEANELIGLMKKR 386
+ ++ EA EL+ M+ +
Sbjct: 373 VGRMDEARELLHEMEAK 389
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 143/356 (40%), Gaps = 50/356 (14%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + + +A + L+ +++ R L+ NE I + + +D A+
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRER-GLQMNEVTFTALIDGFCKKGFLDDALLA 347
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PKVY----------- 176
M + ++ SV NAL+ G + +E + + E P V
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 407
Query: 177 -----------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
G+ P++ TY+ +I+ CE S + + M + ++P+
Sbjct: 408 NCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFT 467
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL---- 275
+ L+ G KE E + M K G+ V Y++ I L K R+ EA+ LL
Sbjct: 468 YTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLY 527
Query: 276 -----------DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
D ++ K L + L+ GF +G + A K++ SM + D
Sbjct: 528 HEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV 587
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + C+ G AL + + +G+ P+ ++ SL+ GL V EA+++I
Sbjct: 588 YSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVI 643
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++PN T+N ++ C++G + EM R+ + P+ + L+ G+ K +
Sbjct: 215 GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEA 274
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
V M + GI V + I +CK E A L+ M RG++ N T+ LI G
Sbjct: 275 LSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDG 334
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+G L+ A M +P C+ C G + A ++ AKG P
Sbjct: 335 FCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 394
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T ++++ A EL
Sbjct: 395 VVTYSTIISAYCKNCDTHSAFEL 417
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ Y+ +I C +G+ S +M ++ PN+T L+ G ++ + +V+
Sbjct: 584 DGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVI 643
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q + C C L +E +KAL+D L+ G N+D ++HG K+
Sbjct: 644 QQLLNC----------------CSLADAEASKALIDLNLNEG---NVDAVLDVLHGMAKD 684
Query: 301 GNLEGAK 307
G L +
Sbjct: 685 GLLPSPR 691
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 16/197 (8%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M K GL+ +L+ G N E + + K G+ P+ TY+ +I
Sbjct: 453 FKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKA-GVLPDVVTYSVLINGLS 511
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLL---------------LAGFYKEHKYEDVGK 238
+S + +L ++ + P T + L L GF + + K
Sbjct: 512 KSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADK 571
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V Q M +VY++ I C+ +A + ML RG PN + LI G
Sbjct: 572 VYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLF 631
Query: 299 KEGNLEGAKKLFASMTN 315
+ G + A ++ + N
Sbjct: 632 ENGMVVEADQVIQQLLN 648
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 3/280 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK-NYEEVKRIFTEFPKVYGIE 179
Y + ++ID A+ +G V + NA+L I SK N + +F E + +
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES-QVS 202
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN +I+ FC +G+ ++ +M K PN + L+ G+ K K +D K+
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M G+ + YN+ I LC+ R +E +L M RG + TY LI G+ K
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EGN A + A M G P + + +C+ G A++ +G P+ T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
+LV G + + EA ++ M F S +NA +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 6/333 (1%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+L+ + F++L L P + +++++ ++ L + +S +L E+ R
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEP----NLISYNVVINGLCREGRMKEVSFVLTEMNRR-GY 306
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
+E + I Y + A+ EM ++GL SV +L+ + N
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F + +V G+ PN TY ++ F + G + Y +L EM P+ + L+ G
Sbjct: 367 -FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K ED VL+ M++ G++ V Y+ + C+ +EA + M+ +GIKP+
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LI GF ++ + A L+ M G PD + + C G+ E AL++
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE 545
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ KG +P T L+ GL S+ EA L+
Sbjct: 546 MVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 150/356 (42%), Gaps = 54/356 (15%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + + +A + N + L++++ R L NER + + + Q ++ A +
Sbjct: 346 ITYTSLIHSMCKAGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM+ G SV NAL+ G ++ E+ + + K G+ P+ +Y+ V+ FC S
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVVSYSTVLSGFCRS 463
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK-------YE-------------- 234
D + EM K I+P+ + L+ GF ++ + YE
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 235 -----------DVGKVLQ----MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
D+ K LQ M+EK G+ V Y++ I L K R+ EAK LL +
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 280 SRGIKPNLDTYKHLIH---------------GFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
P+ TY LI GF +G + A ++F SM +PD
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + C+ G+ A + + + G++ H T+ +LV L KV E N +I
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A F+EM + + +V N L+ G + N + +F + + G PN TYN
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYN 244
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ + +L M K + PN + +++ G +E + ++V VL M +
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN I+ CK +A + ML G+ P++ TY LIH K GN+ A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M G P+ + Q G A +V R G+ P T +L+ G
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 367 LASISKVAEANELIGLMKKR 386
K+ +A ++ MK++
Sbjct: 425 HCVTGKMEDAIAVLEDMKEK 444
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 12/315 (3%)
Query: 77 AFSIAVSKLSQANHFN-AISQL--LEELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAM 131
+ +I ++ L + NH + A+S + +L +PD+ + ++ G N I A+
Sbjct: 130 SLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVI------TFTTLINGVCNEGKIKVAV 183
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ + EM + G V + N L+ G S N +F + + G +PN TYN +I S
Sbjct: 184 ELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ-NGCKPNVVTYNTIIDS 242
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ + L+EM + I P+A + ++ G + + ++ + ME+ G
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YNI I SL K + +A L M+ +GI P++ TY ++HG G L A +LF
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M GC+PD + LC+ A++ + +G P+ T +++ G ++
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422
Query: 372 KVAEANELIGLMKKR 386
++ EA +L M R
Sbjct: 423 QLDEATQLFKEMVGR 437
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+++ AM EM G+ N+++ G E R+F + G +P+ TY
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ-NGCKPDVVTY 306
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I S + + L+EM + I P+ + +L G + + ++ + ME+
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V YN I SLCK + +A L M+ RGI PN TY ++HGF G L+
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +LF M P++ F + LCQ G A V KG P+ T +L+
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486
Query: 366 GLASISKVAEANELIGLM 383
G K+ EA ++ +M
Sbjct: 487 GYCLRCKMNEARKVFEIM 504
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++I + L + N + L E+ + PD+ +H + GQ N A
Sbjct: 302 DVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI-LHGLCYLGQLN---EA 357
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ F++M++ G + V A N ++ + + +E GI PN+ TY+ ++
Sbjct: 358 IRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVD-RGIPPNAVTYSTILH 416
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC G + EM +++ PN F +L+ G +E + V + M + G+
Sbjct: 417 GFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEP 476
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN + C + EA+ + + M+ +G P+L +Y LI+G+ ++ AK L
Sbjct: 477 NIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALL 536
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ P++ + LC G A ++ + + G +P T L+ GL
Sbjct: 537 TQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKH 596
Query: 371 SKVAEANELIGLMKKR 386
+ EA +L MK++
Sbjct: 597 GHLDEALKLFKSMKEK 612
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 5/253 (1%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFC 193
+MD +G+ +V +LN +L+ C+ N+ V + + K++ GI+P+ T+ +I C
Sbjct: 118 QMDLFGVTHTVYSLN-ILINCLCRLNH--VDFAVSVWGKMFKLGIQPDVITFTTLINGVC 174
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G + EM R P+ + L+ G V + ME+ G V
Sbjct: 175 NEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVV 234
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I SLCK + +A L M+ RGI P+ TY ++HG G L A +LF M
Sbjct: 235 TYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRM 294
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC+PD + + L + A + +G P T +++ GL + ++
Sbjct: 295 EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQL 354
Query: 374 AEANELIGLMKKR 386
EA L M+++
Sbjct: 355 NEAIRLFKKMEQK 367
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 6/308 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
D +A++ + L + N + L E+ R + N +S +L+G N+ +D A
Sbjct: 372 DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR-GIPPNAV--TYSTILHGFCNLGQLDEAT 428
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q F+EM + + + L+ G E + +F + G+EPN TYN ++
Sbjct: 429 QLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTE-KGVEPNIYTYNALMNG 487
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C + + M K P+ + +L+ G+ + + +L M +
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPN 547
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
YN ++ LC + R +A+ L M S G+ P L TY L++G K G+L+ A KLF
Sbjct: 548 TVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFK 607
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
SM EPD + + + GG+ E A + A G P T ++ GL
Sbjct: 608 SMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEG 667
Query: 372 KVAEANEL 379
EA EL
Sbjct: 668 LSDEAYEL 675
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 6/251 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDH 129
P + + +S + + +QL +E+ R + F SI++ G Q M+
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTF---SILVDGLCQEGMVSE 461
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A FE M + G+ ++ NAL+ G L E +++F E G P+ +YN +I
Sbjct: 462 ARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF-EIMVGKGCAPDLHSYNILI 520
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C S ++L +M K + PN + ++ G + D ++ + M G+
Sbjct: 521 NGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGML 580
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+I + LCK +EA L M + ++P++ Y LI G G LE AK L
Sbjct: 581 PTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGL 640
Query: 310 FASMTNGGCEP 320
F+ ++ G +P
Sbjct: 641 FSKLSADGIQP 651
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 195 SGDSSSVYSILA---EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
S ++ SV LA M R + RP+ +FG L K +Y V + M+ G+
Sbjct: 68 SSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHT 127
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V NI I LC+L + A ++ M GI+P++ T+ LI+G EG ++ A +L+
Sbjct: 128 VYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYN 187
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M G EPD + LC G A+ V + G P+ T +++ L
Sbjct: 188 EMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR 247
Query: 372 KVAEANELIGLMKKR-FPKSGDMWNAAL 398
V +A + + M R P +N+ +
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIV 275
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 13/313 (4%)
Query: 81 AVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL--YGQANMIDHAMQTFE 135
+ +L +A ++ LLE + R PD+ HS+++ +A+ I A + +
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMA------THSMLINELCKADKIQEAQEFLQ 108
Query: 136 EMDKY--GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M++ S + N+LL +K + IF+ + P+ +Y+ +I FC
Sbjct: 109 GMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFC 168
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + + +M + PN T + L G ++ + D V + M G + V
Sbjct: 169 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVI 228
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I ++ ++A L + M+SRG +PN TY L+HG KE + A +LF M
Sbjct: 229 TYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 288
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC+PD + Y C G+ E A++V ++KG P L+ G K
Sbjct: 289 VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 348
Query: 374 AEANELIGLMKKR 386
EA +L +M R
Sbjct: 349 GEARQLFQVMVSR 361
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 94/219 (42%), Gaps = 2/219 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A +EEM G V + L+ G L++ +++ +F E G PN+ TYN
Sbjct: 208 IADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF-EAMISRGCRPNAVTYN 266
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+ + + +M + P+ + LL GF K E +V M
Sbjct: 267 CLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 326
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN ++ + + EA+ L M+SR KP+ ++ +I G K L+ A
Sbjct: 327 GHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDA 386
Query: 307 KKLFASM-TNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
++F M + GC PD + + LC A+KV
Sbjct: 387 VEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 425
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 135/322 (41%), Gaps = 3/322 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
D S+ +++L +A+ + L+ + R + F +S++ +A + A
Sbjct: 83 DMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVHQAFA 142
Query: 133 TFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F M + + V + + L+ G ++++ + + + PN TYN +
Sbjct: 143 IFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV-PNVTTYNAFLNG 201
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
G + + EM P+ + L+ GF K++ ++ + M G
Sbjct: 202 LMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPN 261
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
YN + LCK + +EA L M+ RG P+ TY L++GF G +E A ++F
Sbjct: 262 AVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFD 321
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G +PD + + G+ A ++ + +++ P + ++ GL+
Sbjct: 322 EMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAK 381
Query: 372 KVAEANELIGLMKKRFPKSGDM 393
++ +A E+ M++ S D+
Sbjct: 382 RLDDAVEVFERMEQDHGCSPDL 403
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + FE M G R + N LL G +E +F + + G +P+ TY
Sbjct: 244 DQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE-RGCDPDKVTYTT 302
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC G + EM K P+ + LL GF++ K + ++ Q+M
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+NI I L K KR ++A + + M G P+L TY LI G E L A
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422
Query: 307 KKLFASMTNGGCEPDSYCF 325
K+F + PD + F
Sbjct: 423 MKVFKEIDRLKLSPDPHAF 441
>gi|218195588|gb|EEC78015.1| hypothetical protein OsI_17428 [Oryza sativa Indica Group]
Length = 363
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 3/292 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+S+ + +L+ F+ + ++L + R ++ F I +YG AN A++T
Sbjct: 74 YSLMIDRLASCRRFSDVEEVLARARAE-SFRFSDEFFYRLIKMYGNVANHPQKAIETLFA 132
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M Y S N +L + + YE V ++ ++ G+ ++ +N ++K C+ G
Sbjct: 133 MPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRL-GVTLDTCCFNILVKGLCQFG 191
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+L EM ++ PN T + L+ + + + ++ + M+K IA+ VYN
Sbjct: 192 KFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYN 251
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I LC+ +R EA L M+ +G PN TY+ L+ G G AK L + M
Sbjct: 252 ILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAE 311
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
P F + LC + A V + + +G+VP T LVT +
Sbjct: 312 RMRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLVTSMC 363
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ F +L + +YE V +V + G+ +NI ++ LC+ + ++A +L
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFDDAISL 199
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M +G PN+ TY L++ + G ++ A +L M D+ + + LC+
Sbjct: 200 LYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYNILISGLCR 259
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
A + ++ + KG P+ T + L+ GL S K EA L+ +M+ + G
Sbjct: 260 EQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPG 316
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 4/192 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD F+I V L Q F+ LL E+ + + N + + Q +D A +
Sbjct: 175 LDTCCFNILVKGLCQFGKFDDAISLLYEMPKQGCV-PNVTTYSTLMNFLCQHGQVDKAFE 233
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF-TEFPKVYGIEPNSETYNKVIKS 191
E M K + N L+ G + E +F + PK G PNS TY ++
Sbjct: 234 LCERMQKEDIAADAVVYNILISGLCREQRVTEAFNLFKSMVPK--GCYPNSGTYQVLLDG 291
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
SG +++ MR + +RP + F LL+ G + +D VL+ M + G
Sbjct: 292 LLSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPR 351
Query: 252 VNVYNIRIQSLC 263
V + + S+C
Sbjct: 352 VGTWTKLVTSMC 363
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 112/266 (42%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + I A+ ++M + G + N L+ G L E + + + G +P
Sbjct: 160 YCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQ-RGCQP 218
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY V+ C+ GD S+L +M + I + + ++ G K +D +
Sbjct: 219 DLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALF 278
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME GI V YN I LC R +A LL M+ R I PN+ T+ LI F KE
Sbjct: 279 NKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKE 338
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KL+ M +PD + + C + A + ++K P+ T
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V E EL M +R
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQR 424
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ ++M+K + V N ++ G K+ ++ +F + + GI P+ TYN
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM-ETKGIRPDVFTYN 294
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G S +L+ M + I PN F L+ F KE K + K+ M K
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + Y+ I C R +EAK + + M+S+ PN+ TY LI GF K +E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M+ G ++ + L Q G+ + A K+ + ++ G P T L+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 367 LASISKVAEA 376
L K+ +A
Sbjct: 475 LCKYGKLEKA 484
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 112/253 (44%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A F +M+ G+R V N+L+ + + R+ + + I PN T++
Sbjct: 271 IDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIE-RKINPNVVTFS 329
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F + G + EM ++SI P+ + L+ GF + ++ + ++M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I+ CK KR EE L M RG+ N TY LI G + G+ + A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+K+F M + G PD + + LC+ G+ E AL V P T ++ G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 367 LASISKVAEANEL 379
+ KV + +L
Sbjct: 510 MCKAGKVEDGWDL 522
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A FE M +V N L+ G +K EE +F E + G+ N+ TYN
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYN 434
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ ++GD I +M + P+ + +LL G K K E V + ++K
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YNI I+ +CK + E+ L + +G+KPN+ Y +I GF ++G E A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M G PDS C+ + G+ + ++ + + G+V ST+ ++
Sbjct: 555 DALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Query: 367 L 367
L
Sbjct: 615 L 615
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 139/323 (43%), Gaps = 10/323 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + L + H + L +++T RPD+ + + YG+ + A
Sbjct: 254 DVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL-ISCLCNYGRWS---DA 309
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ M + + +V +AL+ + E ++++ E K I+P+ TY+ +I
Sbjct: 310 SRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLIN 368
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + M K PN + L+ GF K + E+ ++ + M + G+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN IQ L + + A+ + M+S G+ P++ TY L+ G K G LE A +F
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ EPD Y + + +C+ G+ E + + KG P+ ++++G
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 371 SKVAEANELIGLMKK--RFPKSG 391
EA+ L MK+ P SG
Sbjct: 549 GLKEEADALFREMKEDGTLPDSG 571
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + ++EM K + + ++L+ G + +E K +F E PN TYN +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTL 401
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
IK FC++ + EM ++ + N + L+ G ++ + K+ + M G+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y+I + LCK + E+A + + + ++P++ TY +I G K G +E
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF S++ G +P+ + C+ G E A + R G +P +L+
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARL 581
Query: 369 SISKVAEANELIGLMK 384
A + ELI M+
Sbjct: 582 RDGDKAASAELIKEMR 597
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EM + S+ N LL K ++ V + + I + +YN
Sbjct: 61 LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLR-ISYDLYSYN 119
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC ++L +M + P+ LL G+ + D ++ M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G +N I L ++ EA AL+D M+ RG +P+L TY +++G K G+++ A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G E D + LC+ + A + KG P T SL++
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299
Query: 367 LASISKVAEANELIGLMKKR 386
L + + ++A+ L+ M +R
Sbjct: 300 LCNYGRWSDASRLLSNMIER 319
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 90/210 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP+ T + ++ +C S S +++ +M +P+ F L+ G + +K +
Sbjct: 145 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEA 204
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G + Y + LCK + A +LL M I+ ++ Y +I G
Sbjct: 205 VALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 264
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K +++ A LF M G PD + + LC G + A ++ + + P+
Sbjct: 265 LCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPN 324
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K+ EA +L M KR
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 1/215 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A ++ M+ F EM + GL + N L+ G + + + ++IF + G+ P
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPP 463
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ ++ C+ G + +++ + P+ + +++ G K K ED +
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V +Y I C+ EEA AL M G P+ Y LI ++
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 583
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
G+ + +L M + G D+ M L G
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+AN + + Q F+ M G+ V + ++ ++ +F + KV G+ PN
Sbjct: 174 KANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKV-GVAPNV 232
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I C++G + +M ++ ++P+ +G+L+ G K ++++ +L+
Sbjct: 233 VTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKE 292
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G A VYN I C++ A + D M+S GI PN T LI G+ K
Sbjct: 293 MSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQ 352
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A+ L M GG + F + LC +++AL + + + P+ +
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTL 412
Query: 363 LVTGLASISKVAEANEL-IGLMKKRFPKSGDMWNAAL 398
LV+GL K +EA EL L++K F + NA +
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALI 449
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 12/299 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--I 127
LD ++++ + + +L EE+ R PD+ + ++++L+G NM I
Sbjct: 475 LDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDM------YTYNMLLHGLCNMGKI 528
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + E K G ++ G + EE +++F E + IE N+ Y
Sbjct: 529 EEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM-KIEQNAVVYGT 587
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+++CE+G+ + + +MR + I + + L+ G + ++L M K G
Sbjct: 588 LIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEG 647
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
++ V Y I CKL + + ++L M + PN TY +I+G K GN++ A
Sbjct: 648 LSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAA 707
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KL M G PD+ + T C+ G+ E ALKVC G T +L+ G
Sbjct: 708 KLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + +EM + GL + N L+L C EE ++ E + GI+P+ TYN
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR-RGIQPDMYTYNM 517
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C G + E ++ P+A +G+++ G+ K ++ E+ K+ Q M
Sbjct: 518 LLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK 577
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I VY I++ C+ EA L D M SRGI TY LIHG G ++ A
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L M G P+ C+ C+ G+ + + P+ T ++ G
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697
Query: 368 ASISKVAEANELIGLMKKR 386
+ + A +L+ M ++
Sbjct: 698 CKLGNMKAAAKLLNEMAQK 716
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 148/375 (39%), Gaps = 49/375 (13%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNER 112
+++ DI C + P D FS V+ + +L +E++ P++
Sbjct: 182 YQVFDIMCHCGVTP----DVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNN 237
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+H + G+ +D A Q E+M+K ++ S+ L+ G + + ++E I E
Sbjct: 238 I-IHGLCKNGR---LDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEM 293
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
G PN+ YN +I +C G+ S+ I +M I PN+ L+ G+ K ++
Sbjct: 294 SD-RGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQ 352
Query: 233 YEDVGKVLQMM--------------------EKCGIASGV---------------NVYNI 257
E +L+ M KC S + + +
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTL 412
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ LC+ + EA L +L +G N T LIHG + G+ E A KL M G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
DS + C+ G+ E K+ + +G P T L+ GL ++ K+ EA
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532
Query: 378 ELIGLMKK--RFPKS 390
L KK FP +
Sbjct: 533 GLWHECKKNGNFPDA 547
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 14/343 (4%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
R+ + S +I D ++P S + + + ++N LLEE+ T
Sbjct: 313 CRIGNISTALQIRDDMISNGISPNS----VTCNSLIQGYCKSNQMEHAEHLLEEMLTGGG 368
Query: 107 LRQNERFH--VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYE 163
+ F +H + L + D A+ EM + + L L+ G C K E
Sbjct: 369 VINQGTFTSVIHRLCLKCR---FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSE 425
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
++ + K G N+ T N +I CE+G +L EM + + ++ + L
Sbjct: 426 AIELWYRLLEK--GFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ KE K E+ K+ + M + GI + YN+ + LC + + EEA L G
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ TY +I G+ K +E +KLF M E ++ + C+ G A +
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603
Query: 344 VCRASMAKGWVPHFS-TMKSLVTGLASISKVAEANELIGLMKK 385
+ R M +P S T SL+ GL++I V AN+L+ M+K
Sbjct: 604 L-RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRK 645
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +T N ++ S ++ + Y + M + P+ F ++ F + +D
Sbjct: 157 GLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDA 216
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + MEK G+A V YN I LCK R +EA + M +KP+L TY LI+G
Sbjct: 217 IELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLING 276
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K + A + M++ G P++ + C+ G TAL++ ++ G P+
Sbjct: 277 LVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPN 336
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T SL+ G +++ A L+
Sbjct: 337 SVTCNSLIQGYCKSNQMEHAEHLL 360
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 2/226 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + I + +AN +L +E+ T + QN + I Y + + A +
Sbjct: 546 DAYTYGIMIDGYCKANRVEEGEKLFQEMVTM-KIEQNAVVYGTLIRAYCENGNMREAFRL 604
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M G+ Q+ ++L+ G + ++ E K G+ PN Y +I +C
Sbjct: 605 RDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRK-EGLSPNVVCYTALIGGYC 663
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G V SIL EM ++ PN + +++ G K + K+L M + GI
Sbjct: 664 KLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAV 723
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
YN CK + EEA + D M + GI + TY LI G+ K
Sbjct: 724 TYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%)
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
V+ + + + K + P+ LL+ K ++ + +V +M CG+ V +++ +
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVN 205
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+ C R ++A L M G+ PN+ TY ++IHG K G L+ A + M +P
Sbjct: 206 AFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKP 265
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ + L + ++ A + + +G+ P+ +L+ G I ++ A
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTA 321
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQM---MEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
T LL+ + + K+ G V ++ + G+ + N + SL K + +
Sbjct: 124 VTVVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQ 183
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+ D M G+ P++ + +++ F G ++ A +LF M G P+ + + LC
Sbjct: 184 VFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLC 243
Query: 334 QGGEYETALKVCRASMAKGWV-PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G + A + + M K V P T L+ GL + + EAN ++ M R
Sbjct: 244 KNGRLDEAFQF-KEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDR 296
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 1/295 (0%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+ Q+L E+ T D ++ G+ +M + EM G+R ++ NA++
Sbjct: 150 VIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMI 209
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
+E + I YG P++ TY +I C++G+ + + M +
Sbjct: 210 KILCNKGKVQEAELIMGHIFH-YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGC 268
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PN+ + L+ G E + E+ +L+ M GI V+ Y I I SLC RS EA
Sbjct: 269 DPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVK 328
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M RG PN+ TY LI G ++G E A ++ M G P + + L
Sbjct: 329 LLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLY 388
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
G +ETAL + ++ +P+ T ++ G SI + +A + M K P
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGP 443
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 152/332 (45%), Gaps = 8/332 (2%)
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMI 127
A SP + + ++I + + + N +LLE +K L+ + + + I + + +
Sbjct: 441 AGPSP-NVITYNIIIHIYFKQGYMNNAMRLLEMMKGN-GLKLDTWTYANLISGFSRGGKL 498
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+HA F EM ++G+ +V NA++ G + ++ +F + + G P+S TYN
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES-GNVPSSGTYNM 557
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I F ++ S + +M ++ + PN + + G K + K+ M+K
Sbjct: 558 MISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y+ I LC+ ++E+A+ LLD G +PN+DTY L+ G +G A
Sbjct: 618 YFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEAD 673
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L SM G +P + C+ E E+ALK+ + + G+ P S K+L+ L
Sbjct: 674 QLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICAL 733
Query: 368 ASISKVAEANELIGLMKKRFPKSGD-MWNAAL 398
+ +A + M K+ S + +W L
Sbjct: 734 CKANFRQKAQCMFQTMLKKHWNSDEVVWTVLL 765
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 4/314 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A++I + L A +LL ++K R N + + I + + A+ + +
Sbjct: 309 AYTIPIVSLCDAGRSCEAVKLLGKMKKR-GCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M GL + +AL+ + +E IF E+ + PN+ETYN +IK FC G
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIF-EWMLSHDSLPNTETYNVIIKGFCSIG 426
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+I +M + PN + +++ ++K+ + ++L+MM+ G+ Y
Sbjct: 427 YIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYA 486
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + + E A +L + M+ GI PN+ TY +I+G+ ++ A LF M
Sbjct: 487 NLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G P S + M + A C + +G +P+ T S + GL + + A
Sbjct: 547 GNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLA 606
Query: 377 NELIGLMKKR--FP 388
++ MKKR FP
Sbjct: 607 FKIFHEMKKRDYFP 620
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 38/302 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F+ M K G + +AL+ G EE + E GIEP Y
Sbjct: 253 LDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMID-KGIEPTVHAYT 311
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I S C++G S +L +M+++ PN + L++G ++ K+E V M
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ Y+ I L R E A + + MLS PN +TY +I GF G ++ A
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKA 431
Query: 307 KKLFASMTNGGCEPD--SYCFFMFTYF--------------------------------- 331
+F M G P+ +Y + YF
Sbjct: 432 TAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISG 491
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK--RFPK 389
+GG+ E A + + G P+ T +++ G +++KV +A L M + P
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPS 551
Query: 390 SG 391
SG
Sbjct: 552 SG 553
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 5/189 (2%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F EM K ++ ++L+ G E+ +R+ + G EPN +TY ++
Sbjct: 606 AFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD-----GCEPNVDTYTTLV 660
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C G ++ M++K ++P+ + LL G K + E K+ M G
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ 720
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
++ Y I +LCK ++A+ + ML + + + L+ G KEG + + +L
Sbjct: 721 PCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLEL 780
Query: 310 FASMTNGGC 318
M + C
Sbjct: 781 LHVMESRNC 789
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 26/336 (7%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
F+I+ + G P D +S ++ L +A L +E+K+ + N +
Sbjct: 273 FQIIKVMMGKGFVP----DTSTYSKVITFLCEAMKVEKAFLLFQEMKS---VGVNPDVYT 325
Query: 116 HSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++I++ + +A +I+ A F+EM G +V ALL + +K + IF
Sbjct: 326 YTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMI 385
Query: 174 KVYGIEPNSETYNKVIKSFCESGD---SSSVYSILAEM-------------RRKSIRPNA 217
G PN+ TY+ ++ C++G+ + VY+ L SI PN
Sbjct: 386 DA-GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNV 444
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+G L+ G K HK D ++L M G +Y+ I CK+ + + A+ +
Sbjct: 445 VTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLR 504
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M G P + TY LI K+ L+ A K+ + M C P+ + LC+ GE
Sbjct: 505 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGE 564
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ ALK+ KG P+ T +L+ GL KV
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKV 600
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 97/233 (41%), Gaps = 13/233 (5%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EPN Y+ +I FC+ G + + M + P + L+ +K+ + +
Sbjct: 474 GCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 533
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KVL M + V Y I LC++ ++A LL M +G PN+ TY LI G
Sbjct: 534 MKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDG 593
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
GK G ++ + +LF M+ GC P+ + + C G + A + W +
Sbjct: 594 LGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKY 653
Query: 357 FSTMKSLVTG-----LASISKVAEANE--------LIGLMKKRFPKSGDMWNA 396
S+V G +AS+ + E + GL+ F K+G + A
Sbjct: 654 LQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEA 706
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 16/210 (7%)
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C G + I+ M K P+ + + ++ + K E + Q M+ G+
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I I S CK E+A++ D M S G N+ TY L+H + K L A +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV----------------CRASMAKGW 353
F M + GC P++ + LC+ GE + A +V
Sbjct: 381 FNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLM 383
P+ T +L+ GL KV +A EL+ M
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAM 470
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 114/310 (36%), Gaps = 52/310 (16%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A Q + M G + ++ + E+ +F E V G+ P+ TY
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV-GVNPDVYTYTI 328
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I SFC++G S EMR N + LL + K + + M G
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388
Query: 248 ---------------------------------------------------IASGVNVYN 256
IA V Y
Sbjct: 389 CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYG 448
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I LCK + +A+ LLD MLS G +PN Y LI GF K G ++ A+++F M+
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKC 508
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G P + + + + + A+KV + P+ T +++ GL I + +A
Sbjct: 509 GYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKA 568
Query: 377 NELIGLMKKR 386
+L+ +M+++
Sbjct: 569 LKLLSMMEEK 578
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 104/289 (35%), Gaps = 37/289 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID+A + F M K G +V +L+ + + ++ ++ + PN TY
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVES-SCTPNVVTYT 553
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G+ +L+ M K PN + L+ G K K + ++ M
Sbjct: 554 AMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTK 613
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLD-----------------------------G 277
G A Y + I C +EA +LL G
Sbjct: 614 GCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLG 673
Query: 278 ML----SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF-- 331
+L S G P Y LI F K G LE A +L M + M+T
Sbjct: 674 LLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQ 733
Query: 332 -LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
LC + E A ++ KG VP S L+ GL ++K EA +L
Sbjct: 734 ALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQL 782
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 6/205 (2%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++I E+ S L MR S PN + LL GF K+ + +++ MM K
Sbjct: 111 TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMK 170
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF--GKE--- 300
G +++N + S C + A LL M G P Y I G+E
Sbjct: 171 EGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPS 230
Query: 301 -GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
L A+K++ M C + F LC G+++ A ++ + M KG+VP ST
Sbjct: 231 PDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTST 290
Query: 360 MKSLVTGLASISKVAEANELIGLMK 384
++T L KV +A L MK
Sbjct: 291 YSKVITFLCEAMKVEKAFLLFQEMK 315
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 3/184 (1%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K +G P+ TYN +++ +G + + EM + G KE ++
Sbjct: 32 KDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRW 91
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
D L M+E+ + I L + +EA + L M PN+ TY+ L
Sbjct: 92 SDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTL 148
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ GF K+ L K++ M GC P+ F + C +Y A K+ + G
Sbjct: 149 LTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGC 208
Query: 354 VPHF 357
P +
Sbjct: 209 PPGY 212
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G++ +D ++Q F +M G + L+ C + +E + +E + Y
Sbjct: 595 GKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW-PKY 653
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL- 240
+ Y V++ F + +S +L E+ P A +GLL+ F K + E+ ++
Sbjct: 654 LQGYCSVVQGFSKKFIAS--LGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHK 711
Query: 241 QMMEKCGIASGVNV-----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+MME ++S +N+ Y IQ+LC + E+A L + +G+ P L + LI
Sbjct: 712 EMME---LSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIK 768
Query: 296 GFGKEGNLEGAKKLFASMTNGG 317
G K A +L S+ + G
Sbjct: 769 GLIKVNKWNEALQLCYSICDEG 790
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 91/249 (36%), Gaps = 39/249 (15%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY ++ F + I+ M ++ PN + F L+ + Y K+
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEE---------AKALLDGMLSRGI---KPNL 287
L+ M CG G YNI I S+C EE A+ + + ML+ K N
Sbjct: 200 LKRMADCGCPPGYVAYNIFIGSICG---GEELPSPDLLALAEKVYEEMLASSCVLNKVNT 256
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
+ + G GK + A ++ M G PD+ + FLC+ + E A + +
Sbjct: 257 ANFARCLCGMGK---FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQE 313
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK---------------------KR 386
+ G P T L+ + +A M+ K+
Sbjct: 314 MKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQ 373
Query: 387 FPKSGDMWN 395
P++ D++N
Sbjct: 374 LPQASDIFN 382
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 4/263 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A++ F + K G V N L+ G + E +F+ K +G+EP++ TY
Sbjct: 164 VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK-HGLEPDAITYT 222
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I C++G +L +M K P+ ++ G KE + ++ +L ME
Sbjct: 223 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK---EGNL 303
G + +N I C+ + ++A ML RG+KP + TY L+ G K EG +
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A LF +M G PD + L + G+ + A ++ A AKG +P+ T SL
Sbjct: 343 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 402
Query: 364 VTGLASISKVAEANELIGLMKKR 386
++GL + KV EA EL M ++
Sbjct: 403 ISGLCGLEKVDEALELFVAMVEK 425
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 6/255 (2%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++I++ G + + ++ A + F + K+GL + G + E+ + +
Sbjct: 186 YNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 245
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G P+ ++N VI C+ +L+ M K PNA F L+ G + K+
Sbjct: 246 E-KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK---RSEEAKALLDGMLSRGIKPNLDTY 290
+ + M K G+ V YNI + LCK + R +EA L D M+ +G P++ TY
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI G GK G L+ A++L +M GC P+ Y + LC + + AL++ A +
Sbjct: 365 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVE 424
Query: 351 KGWVPHFSTMKSLVT 365
KG VP T ++++
Sbjct: 425 KGCVPDTITYGTIIS 439
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 10/274 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A+ +D A + + M L V N+L+ G + +E + + + G P
Sbjct: 90 FCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD----KGFSP 145
Query: 181 NSETYNKVIKSFC-ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
N TY+ +I C E S + + ++ P + +L+ G KE + + ++
Sbjct: 146 NVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFEL 205
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ K G+ Y + I LCK R E+A +L M +G P++ ++ +I+G K
Sbjct: 206 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 265
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
E ++ A+ L + M GC P++ F C+ G+++ A+ + + +G P T
Sbjct: 266 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 325
Query: 360 MKSLVTGLASISKVAEANELIGLM-----KKRFP 388
LV GL + E I L K R P
Sbjct: 326 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP 359
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 7/212 (3%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G PN TYN ++ C G S ++ M + P+ + LL GF K + ++
Sbjct: 4 HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDE 63
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
K+ K G V YN I CK + +EA+ +L M+S + P++ TY L++
Sbjct: 64 ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVN 123
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG--GEYETALKVCRASMAKGW 353
G K G ++ A+ L + + G P+ + LC+ G E ALK+ + + +G+
Sbjct: 124 GLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSE-ALKLFGSVLKQGY 179
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI-GLMK 384
P T L+ GL +V EA EL GL+K
Sbjct: 180 EPEVPTYNILIDGLLKEDRVNEAFELFSGLVK 211
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
MR+ PN + LL+G + D + + M K G + V YN + CK+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA + DG + RG P++ TY LI+GF K L+ A+++ M + PD +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA-SISKVAEANELIGLMKKR 386
LC+ G + A + + KG+ P+ T +L++GL + V+EA +L G + K+
Sbjct: 121 LVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ ++M+K + V ++ KN + +FTE GI PN TYN
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDN-KGIRPNVVTYN 294
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ C G S +L++M + I PN F L+ F KE K + K+ M K
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + Y+ I C R +EAK + + M+S+ PN+ TY LI GF K +E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M+ G ++ + L Q G+ + A K+ + ++ G P T L+ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 367 LASISKVAEA 376
L K+ +A
Sbjct: 475 LCKYGKLEKA 484
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ F EMD G+R +V N+L+ + + R+ ++ + I PN T++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFS 329
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F + G + EM ++SI P+ + L+ GF + ++ + ++M
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I+ CK KR EE L M RG+ N TY LI G + G+ + A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+K+F M + G PD + + LC+ G+ E AL V P T ++ G
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 367 LASISKVAEANEL 379
+ KV + +L
Sbjct: 510 MCKAGKVEDGWDL 522
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 106/266 (39%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I A+ ++M + + N L+ G L E + G +P
Sbjct: 160 YCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQP 218
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY V+ C+ GD S+L +M + I + + ++ D +
Sbjct: 219 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLF 278
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ GI V YN I+ LC R +A LL M+ R I PN+ T+ LI F KE
Sbjct: 279 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KL+ M +PD + + C + A + ++K P+ T
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 398
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V E EL M +R
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQR 424
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A FE M +V N L+ G +K EE +F E + G+ N+ TYN
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYN 434
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ ++GD I +M + P+ + +LL G K K E V + ++K
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YNI I+ +CK + E+ L + +G+KPN+ Y +I GF ++G E A
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M G P+S + + G+ + ++ + + G+V ST+ ++
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Query: 367 L 367
L
Sbjct: 615 L 615
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 137/323 (42%), Gaps = 10/323 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + L + N L E+ RP++ + + YG+ + A
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL-IRCLCNYGRWS---DA 309
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +M + + +V +AL+ + E ++++ E K I+P+ TY+ +I
Sbjct: 310 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLIN 368
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + M K PN + L+ GF K + E+ ++ + M + G+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN IQ L + + A+ + M+S G+ P++ TY L+ G K G LE A +F
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ EPD Y + + +C+ G+ E + + KG P+ ++++G
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 371 SKVAEANELIGLMKK--RFPKSG 391
EA+ L MK+ P SG
Sbjct: 549 GLKEEADALFREMKEDGTLPNSG 571
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 114/256 (44%), Gaps = 1/256 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + ++EM K + + ++L+ G + +E K +F E PN TYN +
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTL 401
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
IK FC++ + EM ++ + N + L+ G ++ + K+ + M G+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y+I + LCK + E+A + + + ++P++ TY +I G K G +E
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF S++ G +P+ + C+ G E A + R G +P+ T +L+
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 369 SISKVAEANELIGLMK 384
A + ELI M+
Sbjct: 582 RDGDKAASAELIKEMR 597
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EM + S+ N LL I N ++ E + I + +YN
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLL-SAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC ++L +M + P+ LL G+ + + ++ M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+N I L ++ EA AL+D M++RG +P+L TY +++G K G+++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G E D + LC AL + KG P+ T SL+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 367 LASISKVAEANELIGLMKKR 386
L + + ++A+ L+ M +R
Sbjct: 300 LCNYGRWSDASRLLSDMIER 319
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A ++ M+ F EM + GL + N L+ G + + + ++IF + G+ P
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPP 463
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ ++ C+ G + +++ + P+ + +++ G K K ED +
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V +Y I C+ EEA AL M G PN TY LI ++
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
G+ + +L M + G D+ M L G
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 85/210 (40%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP+ T + ++ +C S +++ +M +PN F L+ G + +K +
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M G + Y + LCK + A +LL M I+ ++ Y +I
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
N+ A LF M N G P+ + LC G + A ++ + + P+
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K+ EA +L M KR
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 145/318 (45%), Gaps = 12/318 (3%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANM 126
P + +++SI ++ + L E+ R PD+ ++ V+ G +A +
Sbjct: 196 PPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVV------TYTTVIDGLCKAQL 249
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
D A F++M G + + N L+ G + ++EV ++ E G++P+ TY
Sbjct: 250 FDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM-SARGLKPDCYTYG 308
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G M RK I+P + +G+L+ G+ + ++ L +M +
Sbjct: 309 SLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVEN 368
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G++ +++NI + K ++A + + M G+ PN+ Y LI K G ++ A
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ F M N G P+ F Y LC ++E A ++ + +G P+ +L+
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 488
Query: 367 LASISKVAEANELIGLMK 384
L ++ +V E LI LM+
Sbjct: 489 LCNVGRVMEGRRLIDLME 506
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 12/301 (3%)
Query: 88 ANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQS 145
+HFN + + + K P+L +SI++ + + ++H F + K G R
Sbjct: 72 VSHFNRMVRECSD-KVAPNL------CTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMD 124
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
A+N LL G K E + + G P++ +Y ++K C + +L
Sbjct: 125 HIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELL 184
Query: 206 AEMRRKSIR---PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
M R PN + +++ GF+ E + + + M GI V Y I L
Sbjct: 185 HMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGL 244
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CK + + A+ + M+ G KPN TY LIHG+ G + ++ M+ G +PD
Sbjct: 245 CKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDC 304
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
Y + +LC+ G A + + KG P ST L+ G A+ ++E + + L
Sbjct: 305 YTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDL 364
Query: 383 M 383
M
Sbjct: 365 M 365
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 12/290 (4%)
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAMQTFEEM-DKYGLR--QSV 146
+ + Q + EL PD ++I+L G N + A++ M D +G R +V
Sbjct: 146 DVLLQRMPELGCMPDTVS------YTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNV 199
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
+ + ++ G ++ +F E GI P+ TY VI C++ +
Sbjct: 200 VSYSIVINGFFTEGQVDKPYNLFLEMID-RGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQ 258
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+M +PN + L+ G+ K+++V ++L+ M G+ Y + LCK
Sbjct: 259 QMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNG 318
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R EA+ D M+ +GIKP + TY LIHG+ +G L M G PD + F
Sbjct: 319 RCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFN 378
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+F + G + A+ + G P+ +L+ L + +V +A
Sbjct: 379 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 109/250 (43%), Gaps = 1/250 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M+ G+R + L+ G L+ +E +++F + G+ P TYN ++ +C +
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSI-GLSPTEVTYNTLLHGYCSAS 563
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
Y + EM RK + P + +L G ++ ++ + ++ M G + YN
Sbjct: 564 RIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 623
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + LCK +EA + + S+G++ N+ T+ +I K G E A LFA++
Sbjct: 624 IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPAN 683
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G P+ + + L + G E + A G P+ + +LV L ++ A
Sbjct: 684 GLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743
Query: 377 NELIGLMKKR 386
+ + +R
Sbjct: 744 GAYLSKLDER 753
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 3/265 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H+ +I Y + MID AM F +M ++GL +V AL+ ++ + F +
Sbjct: 375 HIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQ 434
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G+ PN +N ++ C ++ EM + I PNA F L+
Sbjct: 435 MIN-EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + +++ +ME G+ Y I C R++EA+ + DGM+S G+ P TY
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+HG+ ++ A LF M G P + + L Q + A ++ +
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 613
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G T ++ GL + V EA
Sbjct: 614 GTKCDIYTYNIILNGLCKSNCVDEA 638
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P++ +Y +I +C +G + + M + P + LL G+ + +D
Sbjct: 509 GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDA 568
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + M + G+ GV YN + L + KR EAK L M++ G K ++ TY +++G
Sbjct: 569 YCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNG 628
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K ++ A K+F S+ + G + + F + L +GG E A+ + A A G VP+
Sbjct: 629 LCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 688
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR--FPKSGDMWNAALPR 400
T + + L + E + L M+K P S M NA + R
Sbjct: 689 VVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNS-QMLNALVRR 733
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 9/269 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-----GIEPN 181
+D A++ F+E+ + SV A N LL ++ + + F ++ + PN
Sbjct: 30 LDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPN 89
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF-YKEHKYEDVGKVL 240
TY+ +I FC G ++ + + R + LL G + + E + +L
Sbjct: 90 LCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL 149
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS---RGIKPNLDTYKHLIHGF 297
Q M + G Y I ++ LC KR+EEA LL M R PN+ +Y +I+GF
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
EG ++ LF M + G PD + LC+ ++ A V + + G+ P+
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNN 269
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ G SI K E +++ M R
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSAR 298
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 1/243 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M + G++ V L+ G E+ F + G+ P+ +N ++
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHS-FLDLMVENGLSPDHHIFNIFFSAYA 385
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G I +MR+ + PN ++G L+ K + +D M G+ +
Sbjct: 386 KCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIV 445
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
V+N + LC + + E A+ L+ ML +GI PN + LI G + ++L M
Sbjct: 446 VFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLM 505
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G PD++ + C G + A KV ++ G P T +L+ G S S++
Sbjct: 506 EHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRI 565
Query: 374 AEA 376
+A
Sbjct: 566 DDA 568
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 73/224 (32%), Gaps = 36/224 (16%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A+ ID A F EM + G+ V N +L G +K + E K ++ G +
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS-GTKC 617
Query: 181 NSETYNKVIKSFCES-----------------------------------GDSSSVYSIL 205
+ TYN ++ C+S G +
Sbjct: 618 DIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLF 677
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
A + + PN + L+ +E E+ + MEK G A + N ++ L
Sbjct: 678 AAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHR 737
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
A A L + R T L+ F + AK L
Sbjct: 738 GDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ +++M GL V L+ G + + +F K + + PN YN +
Sbjct: 270 QALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIK-FSVTPNIAVYNSL 328
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I ++C+ GD S ++ E+ R + P+ + +L+ G + E+ G + + M K GI
Sbjct: 329 IDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGI 388
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I CK + ++A + M G++PN+ T+ LI G+ K NL+ A
Sbjct: 389 LANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMG 448
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+++ M PD + C+ G + ALK+ + G P+ T+ L+ GL
Sbjct: 449 IYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLC 508
Query: 369 SISKVAEANEL 379
K+++A EL
Sbjct: 509 KDGKISDALEL 519
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 5/271 (1%)
Query: 120 LYGQANMIDHAMQTFEE----MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
+YG+ ++ M+ EE K G ++ A N LL + + +E + RI+ E
Sbjct: 117 VYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMIS- 175
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+ P+ T+ +I C GD + EMR K I P + +L+ G ++K E+
Sbjct: 176 NGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEE 235
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ + M + G+ V YN + CKL +++A L ML G+ P++ T+ LI
Sbjct: 236 AESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILID 295
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G K G ++ A+ LF +M P+ + C+ G+ A+ + P
Sbjct: 296 GLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSP 355
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ GL S+S+ EA + M K
Sbjct: 356 DVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM G+ +V L+ G EE + + +V G+ PN TYN ++
Sbjct: 201 AQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREV-GVYPNVYTYNTLM 259
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ ++ + +M + + P+ FG+L+ G K + + + M K +
Sbjct: 260 DGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVT 319
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ VYN I + CK+ EA AL + + P++ TY LI G E A +
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNI 379
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F MT G +S + C+ G+ + AL++C G P+ T +L+ G
Sbjct: 380 FEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCK 439
Query: 370 ISKVAEA 376
I + A
Sbjct: 440 IRNLQAA 446
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 104/254 (40%), Gaps = 1/254 (0%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +EEM GL SV L+ GC + + +F E +V GI P Y +I+
Sbjct: 168 RIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEM-RVKGIVPTVIVYTILIRG 226
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C S+ MR + PN + L+ G+ K + ++ Q M G+
Sbjct: 227 LCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPD 286
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V + I I LCK + A+ L M+ + PN+ Y LI + K G++ A LF
Sbjct: 287 VVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFL 346
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ PD + + + LC E A + +G + + T SL+ G
Sbjct: 347 ELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEG 406
Query: 372 KVAEANELIGLMKK 385
K+ +A E+ M +
Sbjct: 407 KMDKALEICSQMTE 420
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 122/311 (39%), Gaps = 19/311 (6%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
+L + R+ G L P D + F I + L + A L + +
Sbjct: 263 CKLANAKQALRLYQDMLGEGLVP----DVVTFGILIDGLCKFGEMKAARNLFVNM-IKFS 317
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
+ N + I Y + + AM F E++++ + V + L+ G EE
Sbjct: 318 VTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAG 377
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
IF + K GI NS TYN +I C+ G I ++M + PN F L+ G
Sbjct: 378 NIFEKMTK-EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDG 436
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ K + + M ++ V Y I CK +EA L ML GI PN
Sbjct: 437 YCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPN 496
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFA----------SMTNGGCEP---DSYCFFMFTYFLC 333
T L+ G K+G + A +LF ++ GG +P + + + LC
Sbjct: 497 CYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLC 556
Query: 334 QGGEYETALKV 344
Q G++ A+K+
Sbjct: 557 QDGQFSKAVKL 567
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 32/159 (20%)
Query: 253 NVYNIRIQSLCKLKRSEEAKAL--------------------------------LDGMLS 280
NVY I LCK++ EEA ++ + M+S
Sbjct: 116 NVYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMIS 175
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G+ P++ T+ LI G ++G+L A+++F M G P + + LC + E
Sbjct: 176 NGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEE 235
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A + RA G P+ T +L+ G ++ +A L
Sbjct: 236 AESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRL 274
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 135/290 (46%), Gaps = 2/290 (0%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
Q +H I + ++ L+ RP+L ++S+V Y ++ + + + F + K G+ +V
Sbjct: 150 QPHHAFQIFKKMKRLRLRPNLLTCNTL-LNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV 208
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
+ N ++ G L +++ K Y P++ TYN ++ + C+ G +L
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGK-YNCSPDNVTYNTILDTLCKKGRLGDARDLLM 267
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+M+ + + PN + +L+ G+ K ++ V+++M + + V YN+ I LC
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R EEA L D M + + P++ +Y LI+G + + A KL M+ G +P++
Sbjct: 328 RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ + C+ G+ + A G+ P T +L+ G + EA
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 147/313 (46%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ ++ + + + +LLEE+ + ++ N H + Y + +D A T
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEK-GVKPNAVTHNIMVKWYCKEGKMDDASNT 405
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M++ G N L+ G + N E R E + ++ +S T N ++++ C
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGR-KNMKMDSVTLNTILRTLC 464
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
Y +L+ R++ + +G L+ G++K+ + K+ M++ I
Sbjct: 465 REKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTV 524
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I LC+ ++E+A + L+ +L G+ P+ TY ++HG+ +EG++E A + M
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+PD + + LC G E ALK+ ++KG T +L+T L ++
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRL 644
Query: 374 AEANELIGLMKKR 386
+A L+ M+++
Sbjct: 645 DDAFNLLSEMEEK 657
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--ID 128
SP D + ++ + L + LL ++K+R L + ++I++YG M +
Sbjct: 240 SP-DNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNR---NTYNILVYGYCKMGWLK 295
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A E M + L V N L+ G EE ++ E + + P+ +YN +
Sbjct: 296 EAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL-KLLPDVVSYNTL 354
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I E S + +L EM K ++PNA +++ + KE K +D + ME+ G
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I CK EA +D M + +K + T ++ +E LE A K
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474
Query: 309 LFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L +S G D SY + YF + G + ALK+ K +P T ++ G
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYF--KDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532
Query: 367 LASISKVAEA----NELI 380
L K +A NEL+
Sbjct: 533 LCQCGKTEQAISKLNELL 550
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 38/245 (15%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR------------------------- 214
P+ + I ++ +SG + I +M+R +R
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 215 -------------PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
PN F +++ G+ E+K++D + L +M K + YN + +
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCK R +A+ LL M SRG+ PN +TY L++G+ K G L+ A + MT PD
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + M LC G E A K+ +P + +L+ G SK++EA +L+
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 382 LMKKR 386
M ++
Sbjct: 373 EMSEK 377
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 116/272 (42%), Gaps = 4/272 (1%)
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV---KRIFTEFP 173
+I Y Q+ HA Q F++M + LR ++ N LL + + V + F +
Sbjct: 141 AIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAI 200
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K+ GI PN T+N VI +C L M + + P+ + +L K+ +
Sbjct: 201 KL-GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRL 259
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
D +L M+ G+ N YNI + CK+ +EA +++ M + P++ TY L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I+G EG +E A KL M N PD + + + A K+ KG
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ T +V K+ +A+ I M++
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 30/285 (10%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVY 176
IV Y + +D A++ ++EM + + S N ++ G C K + + ++
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-- 552
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN ++ +C GD + +M S +P+ +LL G E E
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKA 612
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ G A YN I SLCK R ++A LL M + + P+ TY +I
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDS-----------------------YCFFMFTYFLC 333
G + A++ + M G PD + + LC
Sbjct: 673 LTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELC 732
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL----ASISKVA 374
G+Y+ A+++ S KG ST +L+ GL SISK A
Sbjct: 733 TEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEA 777
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 1/205 (0%)
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
L++G N + +++ E K I P++ TYN +I C+ G + S L E+
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEM-KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+ P+ T + +L G+ +E E + M + V NI ++ LC E+
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEK 611
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L + +S+G + TY LI KEG L+ A L + M PD Y +
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT 671
Query: 331 FLCQGGEYETALKVCRASMAKGWVP 355
L G A + + KG +P
Sbjct: 672 ALTDSGRIREAEEFMSKMLEKGNLP 696
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 142/349 (40%), Gaps = 37/349 (10%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAM 131
LD A+ + LS+ F A+ L+EE++ P L + F V + + A M+ A+
Sbjct: 128 LDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVF-VILMRRFASARMVHKAV 186
Query: 132 QTFEEMDKYG----------------------------------LRQSVDALNALLLGCI 157
Q +EM YG + SV +LL G
Sbjct: 187 QVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKHFTSLLYGWC 246
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
E K + + K GIEP+ YN ++ + ++ Y +L EMRRK PNA
Sbjct: 247 KEGKLMEAKHVLVQM-KDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNA 305
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
T + +L+ K + E+ +V M++ G + + Y+ I CK + + LLD
Sbjct: 306 TSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDE 365
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M+ +G PN Y+H++ K+ LE K+L M GC PD + C+ GE
Sbjct: 366 MIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGE 425
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +++ + G P T ++ G + EA E M R
Sbjct: 426 VKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGR 474
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 39/303 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA+ + A +EM + G + + L+ + EE R+F E + G +
Sbjct: 280 YAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQR-NGCQA 338
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ +I FC+ G Y +L EM ++ PN + ++ K+ + E+ +++
Sbjct: 339 DLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELV 398
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+K G A +++YN I+ CKL +E L + M S G+ P++DT+ +I+GF ++
Sbjct: 399 NEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQ 458
Query: 301 GNLEGAKKLFASMT--------------------------------------NGGCEPDS 322
G L A + F M + GC+ +
Sbjct: 459 GCLVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNV 518
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ ++ + L G + A C A M K +P T L+ GL + A E+
Sbjct: 519 SAWTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRGLKKLYNREFAAEITEK 578
Query: 383 MKK 385
++K
Sbjct: 579 VRK 581
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 129/268 (48%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + I A++ + M+ G++ ++ + L+ G + K++ IF + K G
Sbjct: 488 INLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKD-G 546
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I++FC G ++ EM+++ RP + F ++ GF + + +
Sbjct: 547 LKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRAL 606
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V MM + G V+ +N I L + ++ E+A +LD M G+ PN TY ++HG+
Sbjct: 607 DVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGY 666
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A + F + + G + D Y + C+ G ++AL V + A+ +
Sbjct: 667 AALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNT 726
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A V EA +L+ MK+
Sbjct: 727 FVYNILIDGWARRGDVWEAADLMQQMKQ 754
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 152/387 (39%), Gaps = 49/387 (12%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+LK +N F I + L P+ L +I + AI + E K R
Sbjct: 528 KLKDWANAFAIFEDVVKDGLKPDVVLYN---NIIRAFCGMGTMDRAICMVKEMQKERH-- 582
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R R + I + +A + A+ F+ M + G +V NAL+LG + + E+
Sbjct: 583 RPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIE 642
Query: 168 IFTEFPKVYGIEPNSETYNKV-----------------------------------IKSF 192
I E + G+ PN TY + +K+
Sbjct: 643 ILDEM-ALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKAC 701
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+SG S ++ EM ++I N + +L+ G+ + + ++Q M++ G+ +
Sbjct: 702 CKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDI 761
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y I + CK A +++ M + G+KPN+ TY LIHG+ + E A + F
Sbjct: 762 HTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQE 821
Query: 313 MTNGGCEPDSYCFF-MFTYFLCQGGEYET-----ALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +PD + + T L + E L +C+ + G + T
Sbjct: 822 MKLAGLKPDKAVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGLIVDMGTAVHWSKS 881
Query: 367 LASISKVAEANELIGLMKKRFPKSGDM 393
L I + EL ++K FP +M
Sbjct: 882 LRKIERT--GGELTEALQKTFPPDWNM 906
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 2/303 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI V ++ + +A + +E K R N + + I Y Q +D A
Sbjct: 377 VTYSIIVGGFAKIGNADAADRWFKEAKDRHS-HMNAIIYGNMIYAYCQTCNMDQAEALVR 435
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM+ G+ +D + ++ G + N E+ +F K G P+ +Y +I + +
Sbjct: 436 EMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERL-KECGFAPSVVSYGCLINLYAKV 494
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + M I+ N + +L+ GF K + + + + + K G+ V +Y
Sbjct: 495 GKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLY 554
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I++ C + + A ++ M +P T+ +IHGF + G ++ A +F M
Sbjct: 555 NNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRR 614
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + F L + + E A+++ G P+ T +++ G A++ +
Sbjct: 615 SGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGK 674
Query: 376 ANE 378
A E
Sbjct: 675 AFE 677
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+ + Y+ ++ + G+ ++ ++ P+ +G L+ + K K
Sbjct: 441 GIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKA 500
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V +MME GI + Y++ I KLK A A+ + ++ G+KP++ Y ++I
Sbjct: 501 LEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRA 560
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F G ++ A + M P S F + + GE + AL V G +P
Sbjct: 561 FCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPT 620
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
T +L+ GL ++ +A E++ M
Sbjct: 621 VHTFNALILGLVEKRQMEKAIEILDEM 647
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 126/327 (38%), Gaps = 47/327 (14%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDK 139
V K+S+A +S+++E + +++ +S+++ G + D +A FE++ K
Sbjct: 494 VGKISKALE---VSKMMESAGIKHNMK------TYSMLINGFLKLKDWANAFAIFEDVVK 544
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
GL+ V N ++ + + E K P S T+ +I F +G+
Sbjct: 545 DGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERH-RPTSRTFMPIIHGFARAGEMK 603
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYK----------------------EHKYE--- 234
+ MRR P F L+ G + EH Y
Sbjct: 604 RALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIM 663
Query: 235 -------DVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
D GK + K G+ V Y +++ CK R + A A+ M ++ I
Sbjct: 664 HGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 723
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
N Y LI G+ + G++ A L M GG +PD + + F C+ G+ A K+
Sbjct: 724 RNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKM 783
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASIS 371
G P+ T +L+ G A S
Sbjct: 784 MEEMETSGVKPNVKTYTTLIHGWARAS 810
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 127/311 (40%), Gaps = 2/311 (0%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R + + VS ++ + Q E ++ R + + I Y ++ A+
Sbjct: 306 RREYGLMVSYYARRGDMHRARQTFESMRAR-GIEPTSHVYTSLIHAYAVGRDMEEALSCA 364
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + G+ S+ + ++ G N + R F E + N+ Y +I ++C+
Sbjct: 365 RKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHS-HMNAIIYGNMIYAYCQ 423
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + +++ EM + I + ++ G+ E V + +++CG A V
Sbjct: 424 TCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVS 483
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I K+ + +A + M S GIK N+ TY LI+GF K + A +F +
Sbjct: 484 YGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVV 543
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +PD + C G + A+ + + + P T ++ G A ++
Sbjct: 544 KDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMK 603
Query: 375 EANELIGLMKK 385
A ++ +M++
Sbjct: 604 RALDVFDMMRR 614
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 89/227 (39%), Gaps = 9/227 (3%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+N+++V F K P+ Y ++ + GD MR + I P +
Sbjct: 289 ENWQDVVSAFERIKK-----PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHV 343
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ + E+ + M++ G+ + Y+I + K+ ++ A
Sbjct: 344 YTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAK 403
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQGGE 337
R N Y ++I+ + + N++ A+ L M G + D Y M Y + G
Sbjct: 404 DRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMV--GN 461
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
E L V G+ P + L+ A + K+++A E+ +M+
Sbjct: 462 EEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMME 508
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%)
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
KP+ Y ++ + + G++ A++ F SM G EP S+ + + G + E AL
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
R +G T +V G A I A+ K R
Sbjct: 363 CARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDR 405
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 150/342 (43%), Gaps = 24/342 (7%)
Query: 61 ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAIS--QLLEELKTRPDLRQNERFHVHSI 118
I C + L ++PL +FS+ L N I+ L++ L + + Q +FH +
Sbjct: 114 INCFSQLG-QNPL---SFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169
Query: 119 VLYGQANMIDH---------------AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
L N + + A+Q +D ++ +V N ++ K
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E +++E GI P+ TYN +I FC G + +M ++I PN F +L
Sbjct: 230 EAFDLYSEMVS-KGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF KE + ++ VL MM K GI V YN + C +K +AK + + + RG+
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
PN+ +Y +IHGF K ++ A LF M PD + LC+ G+ ALK
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408
Query: 344 VCRASMAKGWVPHFS-TMKSLVTGLASISKVAEANELIGLMK 384
+ +G VPH T S++ L +V +A L+ MK
Sbjct: 409 LVDEMHDRG-VPHDKITYNSILDALCKNHQVDKAIALLTKMK 449
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 108/222 (48%), Gaps = 1/222 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++PN YN +I S C+ + + + +EM K I P+ + L++GF K +D
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M I V +NI + CK +R +EAK +L M+ +GIKP++ TY L+ +
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRY 327
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ AK +F +++ G P+ + + + + C+ + + A+ + + +P
Sbjct: 328 CLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDV 387
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
T SL+ GL + K++ A +L+ M R P +N+ L
Sbjct: 388 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSIL 429
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 145/348 (41%), Gaps = 37/348 (10%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAM 131
L+++++ ++ L + +A QLL + + L Q ++I+ + +++ A
Sbjct: 175 LNKVSYGTLINGLCKVGQTSAALQLLRRVDGK--LVQPNVVMYNTIIDSMCKVKLVNEAF 232
Query: 132 QTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEV----KRIFTEF-PKVY--------- 176
+ EM G+ V NAL+ G CI+ K + K IF P VY
Sbjct: 233 DLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGF 292
Query: 177 -------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
GI+P+ TYN ++ +C + + I + ++ + PN
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNI 352
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ +++ GF K K ++ + + M I V YN I LCKL + A L+D
Sbjct: 353 HSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDE 412
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M RG+ + TY ++ K ++ A L M + G +PD + LC+ G
Sbjct: 413 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGR 472
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
E A V + KG++ + +++ G S E+ +L+ M++
Sbjct: 473 LEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEE 520
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A M K G++ V N+L+ L K + K IF + G+ PN +Y+ +I
Sbjct: 301 AKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQ-RGVNPNIHSYSIMI 359
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ ++ EM +I P+ + L+ G K K K++ M G+
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 419
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + +LCK + ++A ALL M GI+P++ TY L+ G K G LE A+ +
Sbjct: 420 HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIV 479
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F + G D + C G ++ +L + G +P+ T + ++ L
Sbjct: 480 FEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFD 539
Query: 370 ISKVAEANELIGLMKKR 386
+ +A +L+ M R
Sbjct: 540 KDENDKAEKLLREMITR 556
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A F + + G+ ++ + + ++ G K +E +F E I P+ TYN
Sbjct: 333 VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEM-HCNNIIPDVVTYN 391
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G S ++ EM + + + + +L K H+ + +L M+
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 451
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + Y + LCK R E+A+ + + +L +G +++ Y +I GF G + +
Sbjct: 452 GIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDES 511
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
L + M GC P++ + + L E + A K+ R + +G
Sbjct: 512 LDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF------YKE 230
GI + + +I F + G + +S+LA++ + PN L+ G ++
Sbjct: 102 GITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQA 161
Query: 231 HKYED-----------------------VGKV---LQMMEKCG---IASGVNVYNIRIQS 261
++ D VG+ LQ++ + + V +YN I S
Sbjct: 162 LQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 221
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+CK+K EA L M+S+GI P++ TY LI GF G ++ A LF M P+
Sbjct: 222 MCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPN 281
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
Y F + C+ + A V M +G P T SL+ + +V +A +
Sbjct: 282 VYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFN 341
Query: 382 LMKKR 386
+ +R
Sbjct: 342 TISQR 346
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 140/319 (43%), Gaps = 6/319 (1%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A L PE+ L F++ + L + + + +E+++R R F+ I +A
Sbjct: 110 AGLPPEAKL----FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTM-ISGMCRA 164
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+D A M + G+ V AL+ G E+ + +F + G++PN+
Sbjct: 165 GDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG-RGMKPNAVV 223
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+ +I + C+ GD+ ++ + EMR + +RP+A + ++ G + + ++ M
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ Y I CK + + A + M++ G+ + TY LI G K G
Sbjct: 284 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 343
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A+++ M G EPD+ + M C+ G+ +T L++ + KG P T ++
Sbjct: 344 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 403
Query: 365 TGLASISKVAEANELIGLM 383
G + ++ A+ L+ M
Sbjct: 404 NGFCKLGQMKNADMLLNAM 422
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 12/309 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
++F+ +S + +A + L + E PD+ + + ++ G + I+ A
Sbjct: 152 VSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV------YTYGALIQGLCRVGRIEDA 205
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
FE+M G++ + L+ + E + + E + G+ P++ TYN ++
Sbjct: 206 RGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREM-RERGVRPDAVTYNAIVN 264
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + D S I+ EMR +RP+ + L+ G+ KE + + ++ Q M G+
Sbjct: 265 GLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 324
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I L K RS +A+ +L M+ G++P+ TY +I F ++G+++ +L
Sbjct: 325 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLL 384
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N G +P + + C+ G+ + A + A + G P T L+ G
Sbjct: 385 KEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 444
Query: 371 SKVAEANEL 379
KV + EL
Sbjct: 445 GKVTDIEEL 453
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 5/265 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A ++M + + N+L+ G + S + E RI E + G PN TYN
Sbjct: 172 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSR-DGQRPNVVTYN 230
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+SG + I M + +P+AT +G LL G+ E ++ V +M +
Sbjct: 231 MLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQN 290
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ S + ++I I + CK R +EA M G P++ TY +I G K G L+ A
Sbjct: 291 GMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDA 350
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
F M + G P+ F + G++E A ++ M +G P + +++
Sbjct: 351 MSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDR 410
Query: 367 LASISKVAEANELIGLMKKRFPKSG 391
L KV EA +L LM P++G
Sbjct: 411 LFKEGKVTEAQKLFDLM----PRAG 431
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 2/215 (0%)
Query: 164 EVKRIFTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+V + +T F K+ +GI PN T N VI C+ ++L +M + I PN T +
Sbjct: 136 DVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYN 195
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ G+ ++ + ++L+ M + G V YN+ I LCK EA+ + + M+
Sbjct: 196 SLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQS 255
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G KP+ TY L+HG+ EGNL + M G + + F + Y C+ G + A
Sbjct: 256 GPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEA 315
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G++P T +++ GL I ++ +A
Sbjct: 316 SLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDA 350
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 22/236 (9%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-C 156
+++L + +R N I Y + +D A TF +M + G + ++ G C
Sbjct: 283 VKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLC 342
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+ + + + R G+ PN T+ +I F G + EM + I P+
Sbjct: 343 KIGRLDDAMSRFCQMIDD--GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPD 400
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS--------------- 261
T F ++ +KE K + K+ +M + G V YN I
Sbjct: 401 VTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 460
Query: 262 ---LCKLKRSEEA-KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
L LK + LLDGM+S G+KP++DT K LI ++G +E LF M
Sbjct: 461 DMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREM 516
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY VI C+ G S +M + PN F L+ GF K+E
Sbjct: 326 GFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKA 385
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M GI V ++ I L K + EA+ L D M G KPN+ +Y +IHG
Sbjct: 386 EELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHG 445
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ G + KL M G +P + F
Sbjct: 446 YFIAGEVGEVMKLLDDMLLIGLKPTAVTF 474
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 93/245 (37%), Gaps = 38/245 (15%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSI-LAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+ ++ + ++++ C +S +I L M P+ + LL G E K E+
Sbjct: 43 GLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEE 102
Query: 236 VGKVLQMMEKCGIASGVNV--YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL------ 287
+++ MM + G +V Y+ I K +A L ML GI PN+
Sbjct: 103 AAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSV 162
Query: 288 -----------------------------DTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
TY LIHG+ G A ++ M+ G
Sbjct: 163 IDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQ 222
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
P+ + M LC+ G + A ++ + + G P +T SL+ G A+ + E N
Sbjct: 223 RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNN 282
Query: 379 LIGLM 383
+ LM
Sbjct: 283 VKDLM 287
>gi|359489475|ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
vinifera]
Length = 1105
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 9/288 (3%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+S+P +I ASL P +F I + KL A F+ + LL LK+
Sbjct: 52 IASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMRLKSE-QYS 110
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
N I +YG+AN+ D A++TF M ++ + LN LL + +NY ++
Sbjct: 111 INPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSHRNY--IRPA 168
Query: 169 FTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F F YG+ P++++YN ++ +FC +GD S Y++ +M ++ + P+ + +L+ G
Sbjct: 169 FDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQG 228
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++ + +L+ M G + + LC +EAK ++ MLS+G +
Sbjct: 229 LCRKSQVNRAVDLLEDMLNKGYVPDATL----VSGLCDQGLYDEAKNYVEEMLSKGFSLH 284
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ LI+GF G LE A ++ M G P + + +C+
Sbjct: 285 FSVFHALINGFCNVGKLEEACEVLREMLRHGEAPHTETWVAIIPRICE 332
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN YN +I C+ + Y + +EM + I P+A + L+ GF + +
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSL 207
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M I GV +YNI I +LCK +EAK LL M GIKP + TY L+ G+
Sbjct: 208 LDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCL 267
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G ++ AK++F +M G P+ Y + + LC+ + A+ + R + K VP T
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVT 327
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL ++ A L+ M R
Sbjct: 328 YNSLIDGLCKSGRITSALNLMNEMHHR 354
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 11/287 (3%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+++E+ TRP++ +++ ++ G + +++ A + EMD G+ L+
Sbjct: 139 RMIEDRSTRPNVV------MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 154 LG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
G C+L + + K I P YN +I + C+ G+ ++LA M ++
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILK--NINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEG 250
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
I+P + L+ G+ + ++ ++ M + G+ V YNI I LCK KR +EA
Sbjct: 251 IKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAM 310
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
LL ML + + P+ TY LI G K G + A L M + G D + L
Sbjct: 311 NLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDAL 370
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
C+ + A + +G P T +L+ GL ++ A EL
Sbjct: 371 CKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 417
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 1/231 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K G++ V + L+ G L + K+IF ++ G+ PN +YN +I C+
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQM-GVNPNVYSYNIMINGLCKCK 304
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
++L EM K++ P+ + L+ G K + ++ M G + V Y
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ +LCK + ++A AL M RGI+P + TY LI G K G L+ A++LF +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
GC D + + + LC+ G ++ AL + G +P+ T + ++ L
Sbjct: 425 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSL 475
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 1/228 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ +A Q F M + G+ +V + N ++ G K +E + E + P++ TYN
Sbjct: 271 VQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH-KNMVPDTVTYN 329
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+SG +S +++ EM + + + LL K + + M++
Sbjct: 330 SLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 389
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + Y I LCK R + A+ L +L +G ++ TY +I G KEG + A
Sbjct: 390 GIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEA 449
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ + M + GC P++ F + L + E + A K+ +AKG +
Sbjct: 450 LAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 8/222 (3%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+V GI N T N +I FC G + +S+L ++ + +P+ L+ G +
Sbjct: 37 EVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKG-- 94
Query: 234 EDVGKVLQMMEKCGIASGVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+V K L +K +A G + Y + LCK+ + A LL + R +PN+
Sbjct: 95 -EVKKSLHFHDKV-VAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVM 152
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y +I G K+ + A L++ M G PD+ + Y C G+ A + +
Sbjct: 153 YNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMI 212
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
K P L+ L V EA L+ +M K K G
Sbjct: 213 LKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPG 254
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+N + SL K+K+ A +L M +GI+ N T LI+ F G + + + +
Sbjct: 13 FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL 72
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +PD+ LC GE + +L +A+G+ + +L+ GL I +
Sbjct: 73 KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132
Query: 375 EANELIGLMKKR 386
A +L+ +++ R
Sbjct: 133 CAVKLLRMIEDR 144
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 38/314 (12%)
Query: 107 LRQNERFHVHSIVL----YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
+R E +V + + Y +A ++ A+ TF M+KY ++ +V A N LL SKN
Sbjct: 82 MRNKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGLLSALCKSKNV 141
Query: 163 EEVKRIFTE------------------------FPK---VY------GIEPNSETYNKVI 189
+ + IF PK +Y G P+ TY+ ++
Sbjct: 142 RKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMV 201
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C++G I+ EM + +P++ + +L+ + E++ ED ME+ G+
Sbjct: 202 DVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVM 261
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ V YN I + CK + + +L M +G+ PN T +I+ G + A K+
Sbjct: 262 ADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKI 321
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M CEPD + M C E + ALK+ + K +VP T L+ GL
Sbjct: 322 FRRMIK-VCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQ 380
Query: 370 ISKVAEANELIGLM 383
I +A L+ M
Sbjct: 381 IGNATQACVLLEEM 394
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 3/247 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +SI V L +A + ++++E+ + + + + + YG N I+ A+ T
Sbjct: 193 DEVTYSIMVDVLCKAGRVDEAVEIVKEMDYN-NCKPSSFIYSVLVHTYGVENRIEDAVST 251
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM++ G+ V A NAL+ + + V R+ + + G+ PNS T N +I S
Sbjct: 252 FLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDM-DLKGVNPNSRTCNIIINSLI 310
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G++ + I M K P+ + +++ F + + K+ + M+K ++
Sbjct: 311 GRGETDEAFKIFRRMI-KVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMH 369
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+++ I LC++ + +A LL+ M+ +GI+P+ T+ L H KEG + K L M
Sbjct: 370 TFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKDVLKFLQEKM 429
Query: 314 TNGGCEP 320
EP
Sbjct: 430 NLLVKEP 436
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 26/290 (8%)
Query: 111 ERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV-DALNAL----LLG----CILSKN 161
+R +VHS+ Y H+M E + K Q V D +NA+ +L CI+ +
Sbjct: 49 QRNYVHSVRAY-------HSM--IESLAKIRQYQMVWDLVNAMRNKEILNVEAFCIIMRK 99
Query: 162 Y------EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
Y EE F K Y ++PN +N ++ + C+S + I M+ + + P
Sbjct: 100 YARAQKVEEAVYTFNVMEK-YNMKPNVAAFNGLLSALCKSKNVRKAQEIFDNMKDQFV-P 157
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
++ + +L+ G+ + ++ + M G Y+I + LCK R +EA ++
Sbjct: 158 DSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIV 217
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M KP+ Y L+H +G E +E A F M G D + C+
Sbjct: 218 KEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMERNGVMADVAAYNALISAFCKA 277
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ + +V + KG P+ T ++ L + EA ++ M K
Sbjct: 278 NKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIK 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 2/214 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A++ +EMD + S + L+ + E+ F E + G+ +
Sbjct: 206 KAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFLEMER-NGVMADV 264
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN +I +FC++ +VY +L +M K + PN+ +++ + ++ K+ +
Sbjct: 265 AAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRR 324
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M K V+ Y + I+ C K + A + M + P++ T+ LI+G + GN
Sbjct: 325 MIKV-CEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGN 383
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
A L M G P F + L + G
Sbjct: 384 ATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEG 417
>gi|297599210|ref|NP_001046823.2| Os02g0468500 [Oryza sativa Japonica Group]
gi|47497324|dbj|BAD19365.1| fertility restorer homologue A-like [Oryza sativa Japonica Group]
gi|125582052|gb|EAZ22983.1| hypothetical protein OsJ_06677 [Oryza sativa Japonica Group]
gi|255670892|dbj|BAF08737.2| Os02g0468500 [Oryza sativa Japonica Group]
Length = 506
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 147/330 (44%), Gaps = 8/330 (2%)
Query: 73 LDRMAFSIAVSKLSQANHF-NAISQLLEELK-TRPDLRQNERFHVHSIVL--YGQANMID 128
+ R A ++ + +L + + +++LL +L+ R +++I++ Y + +
Sbjct: 150 VSRKALAVCLDRLVSSRRCPDVLTELLADLRDPRSKYLPQPNTCIYNILIKHYVKKGDLG 209
Query: 129 HAMQTFEEMDKYG---LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
A Q F+EM K +R S+ + L+ G +E +F + + I P+ TY
Sbjct: 210 TAFQVFDEMRKMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTY 269
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I FC G SI MR+ PNA ++ L+ G K+ + E V + M +
Sbjct: 270 NLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIR 329
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y + LC+ +E L+ M +G K ++ TY L+ G K+ +
Sbjct: 330 SGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAE 389
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A L + + G + + + + LC GE E A + + +G+VPH++ L+
Sbjct: 390 AVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLI 449
Query: 366 GLASISKVAEAN-ELIGLMKKRFPKSGDMW 394
GL + +V++A L GL+ F W
Sbjct: 450 GLCDVGRVSDATVTLYGLVDTGFMPEARCW 479
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 135/290 (46%), Gaps = 2/290 (0%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
Q +H I + ++ L+ RP+L ++S+V Y ++ + + + F + K G+ +V
Sbjct: 150 QPHHAFQIFKKMKRLRLRPNLLTCNTL-LNSLVRYPSSHSVSFSREAFNDAIKLGIVPNV 208
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
+ N ++ G L +++ K Y P++ TYN ++ + C+ G +L
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGK-YNCSPDNVTYNTILDALCKKGRLGDARDLLM 267
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+M+ + + PN + +L+ G+ K ++ V+++M + + V YN+ I LC
Sbjct: 268 DMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG 327
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R EEA L D M + + P++ +Y LI+G + + A KL M+ G +P++
Sbjct: 328 RIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHN 387
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ + C+ G+ + A G+ P T +L+ G + EA
Sbjct: 388 IMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 147/313 (46%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ ++ + + + +LLEE+ + ++ N H + Y + +D A T
Sbjct: 347 DVVSYNTLINGCLEWSKISEAFKLLEEMSEK-GVKPNAVTHNIMVKWYCKEGKMDDASNT 405
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M++ G N L+ G + N E R E + ++ +S T N ++++ C
Sbjct: 406 ITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGR-KNMKMDSVTLNTILRTLC 464
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
Y +L+ R++ + +G L+ G++K+ + K+ M++ I
Sbjct: 465 REKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTV 524
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I LC+ ++E+A + L+ +L G+ P+ TY ++HG+ +EG++E A + M
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+PD + + LC G E ALK+ ++KG T +L+T L ++
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRL 644
Query: 374 AEANELIGLMKKR 386
+A L+ M+++
Sbjct: 645 DDAFNLLSEMEEK 657
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 134/318 (42%), Gaps = 15/318 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--ID 128
SP D + ++ + L + LL ++K+R L + ++I++YG M +
Sbjct: 240 SP-DNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNR---NTYNILVYGYCKMGWLK 295
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A E M + L V N L+ G EE ++ E + + P+ +YN +
Sbjct: 296 EAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL-KLLPDVVSYNTL 354
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I E S + +L EM K ++PNA +++ + KE K +D + ME+ G
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGF 414
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I CK EA +D M + +K + T ++ +E LE A K
Sbjct: 415 SPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYK 474
Query: 309 LFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L +S G D SY + YF + G + ALK+ K +P T ++ G
Sbjct: 475 LLSSARKRGYFIDEVSYGTLIVGYF--KDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGG 532
Query: 367 LASISKVAEA----NELI 380
L K +A NEL+
Sbjct: 533 LCQCGKTEQAISKLNELL 550
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 38/245 (15%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR------------------------- 214
P+ + I ++ +SG + I +M+R +R
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 215 -------------PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
PN F +++ G+ E+K++D + L +M K + YN + +
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCK R +A+ LL M SRG+ PN +TY L++G+ K G L+ A + MT PD
Sbjct: 253 LCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPD 312
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + M LC G E A K+ +P + +L+ G SK++EA +L+
Sbjct: 313 VWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLE 372
Query: 382 LMKKR 386
M ++
Sbjct: 373 EMSEK 377
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 116/272 (42%), Gaps = 4/272 (1%)
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV---KRIFTEFP 173
+I Y Q+ HA Q F++M + LR ++ N LL + + V + F +
Sbjct: 141 AIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAI 200
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K+ GI PN T+N VI +C L M + + P+ + +L K+ +
Sbjct: 201 KL-GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRL 259
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
D +L M+ G+ N YNI + CK+ +EA +++ M + P++ TY L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I+G EG +E A KL M N PD + + + A K+ KG
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ T +V K+ +A+ I M++
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 114/285 (40%), Gaps = 30/285 (10%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVY 176
IV Y + +D A++ ++EM + + S N ++ G C K + + ++
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES-- 552
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN ++ +C GD + +M S +P+ +LL G E E
Sbjct: 553 GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKA 612
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ G A YN I SLCK R ++A LL M + + P+ TY +I
Sbjct: 613 LKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITA 672
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSY-----------------------CFFMFTYFLC 333
G + A++ + M G P + + LC
Sbjct: 673 LTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELC 732
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL----ASISKVA 374
G+Y+ A+++ S KG ST +L+ GL SISK A
Sbjct: 733 TEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEA 777
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 1/205 (0%)
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
L++G N + +++ E K I P++ TYN +I C+ G + S L E+
Sbjct: 493 TLIVGYFKDGNVDRALKLWDEM-KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+ P+ T + +L G+ +E E + M + V NI ++ LC E+
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEK 611
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L + +S+G + TY LI KEG L+ A L + M PD Y +
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT 671
Query: 331 FLCQGGEYETALKVCRASMAKGWVP 355
L G A + + KG +P
Sbjct: 672 ALTDSGRIREAEEFMSKMLEKGXLP 696
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 5/266 (1%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L ++D A+ + + + + N +LL ++ E R+F + P
Sbjct: 137 LLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA----- 191
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN T+N +I C+ GD + ++LA M+ P+ + L+ G+ K + E+V K+
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M CG V YN + CK R E A + M G+ N+ T+ + F K
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A KLFA M G +P+ + C+ G + AL + + +G + T
Sbjct: 312 NGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
LV GL KVAEA ++ LM++
Sbjct: 372 YTVLVDGLCKEGKVAEAEDVFRLMER 397
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 8/308 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH---VHSIVLYGQANMID 128
PL+ + +++ V L + A ++ + L R +R NE + +H +Y + +
Sbjct: 366 PLNVVTYTVLVDGLCKEGKV-AEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS---E 421
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ EM G+ V AL+ G + +E K + + + G++PN+ Y +
Sbjct: 422 RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDEC-GLKPNNVIYTNI 480
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + ++ S ++L +M RPN + L+ G K ++ M G+
Sbjct: 481 MDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGL 540
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y + LCK R ++A LLD M+ +G+ + L+ G K+GNL+ A
Sbjct: 541 EPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFA 600
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L A M N G + D Y + F + C + A +V + G P L+
Sbjct: 601 LKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQ 660
Query: 369 SISKVAEA 376
+ + EA
Sbjct: 661 KLGNMEEA 668
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 109/251 (43%), Gaps = 5/251 (1%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G V N+L+ G EEV+++ E + G P+ TYN ++ FC+ G
Sbjct: 220 MKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM-RGCGCRPDVVTYNALVNCFCKFG 278
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
YS AEM+R+ + N F + F K + K+ M G+ Y
Sbjct: 279 RMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYT 338
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ CK R ++A L + M+ +G+ N+ TY L+ G KEG + A+ +F M
Sbjct: 339 CLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERA 398
Query: 317 GCEPDS--YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G + Y + +F+ + E AL + KG S +L+ GL ++ K+
Sbjct: 399 GIRANELLYTTLIHGHFVYKNS--ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLD 456
Query: 375 EANELIGLMKK 385
EA L+ M +
Sbjct: 457 EAKSLLNKMDE 467
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A+ EM + G+ +V L+ G E + +F + GI N
Sbjct: 346 KAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERA-GIRANE 404
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I +S S+L+EM+ K + + + +G L+ G K ++ +L
Sbjct: 405 LLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNK 464
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M++CG+ +Y + + K ++ EA ALL M+ G +PN+ TY L+ G K G+
Sbjct: 465 MDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGS 524
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A F M + G EP+ + LC+ G + A+ + + KG S
Sbjct: 525 IDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTS 584
Query: 363 LVTG 366
L+ G
Sbjct: 585 LMDG 588
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 165/419 (39%), Gaps = 67/419 (15%)
Query: 3 LLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDIC 62
L +RL V N+ L GD A A RA +AR+K+ I
Sbjct: 181 LAWRLFEQLPAPNVFTFNIMIDFLCKEGDLAEA-------RALLARMKA---------IG 224
Query: 63 CGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIV 119
C SP D + ++ + + + +L+ E++ RPD+ V+
Sbjct: 225 C-------SP-DVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNAL-VNCFC 275
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
+G+ ++ A F EM + G+ +V + + + E ++F + ++ G++
Sbjct: 276 KFGR---MERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQM-RMKGMK 331
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY ++ C++G + EM ++ + N + +L+ G KE K + V
Sbjct: 332 PNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDV 391
Query: 240 LQMMEKCGIASG-----------------------------------VNVYNIRIQSLCK 264
++ME+ GI + V++Y I LC
Sbjct: 392 FRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCN 451
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
L++ +EAK+LL+ M G+KPN Y +++ K A L M + G P+
Sbjct: 452 LQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVT 511
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ LC+ G + A+ + G P+ +LV GL ++ +A L+ M
Sbjct: 512 YCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEM 570
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
LA +R + PN +L +E E ++ + + A V +NI I LCK
Sbjct: 151 LARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCK 206
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
EA+ALL M + G P++ TY LI G+GK G LE +KL M GC PD
Sbjct: 207 EGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVT 266
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ C+ G E A +G + + T + V V EA +L M+
Sbjct: 267 YNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMR 326
Query: 385 KRFPKSGDM 393
+ K ++
Sbjct: 327 MKGMKPNEV 335
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEP 180
+ NM+ A++ F M G SV N ++LG ++ EV ++ F ++ + P
Sbjct: 121 RENMVGDAVEAFRLMGFRGFSPSVFTCN-MVLGSLVKD--REVDLFWSFFKEMIANRVSP 177
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T+N ++ + CE G S +L +M P A + LL + K+ +Y+ +++
Sbjct: 178 NVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELI 237
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M GIA+ V YN+ I LC+ RS + +L M + PN TY LI+G KE
Sbjct: 238 DAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKE 297
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A K+F M+ P+S + + C G E AL++C ++ G P+ T
Sbjct: 298 GKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTY 357
Query: 361 KSLVTGLASISKVAEANELIGLMK 384
+L+ G++ ++ + ++ M+
Sbjct: 358 GALLNGISKHAQFGLVSSVLERMR 381
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 76/191 (39%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI + TYN +I C S+ Y IL MR+ + PN + L+ G KE K
Sbjct: 244 GIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVA 303
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV + M C + YN I C EEA L D M+S G++PN TY L++G
Sbjct: 304 TKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNG 363
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K + M G + LC+ G E A+++ + P
Sbjct: 364 ISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPD 423
Query: 357 FSTMKSLVTGL 367
T LV G
Sbjct: 424 IVTFSVLVNGF 434
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + ++F E + + PNS TYN +I C +G+ + M
Sbjct: 288 NTLINGLVKEGKIGVATKVFEEM-SLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMV 346
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+RPN +G LL G K ++ V VL+ M G+ G Y I LCK E
Sbjct: 347 SHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLE 406
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKE-------------------GNLEGAKKLF 310
EA LLD ML + P++ T+ L++GF K GNL+ A +
Sbjct: 407 EAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAY 466
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
A M G D + + C+ G E A
Sbjct: 467 AVMNQSGHVSDHFTSSVLVASFCRCGRLEEA 497
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN Y ++ + G S + + +M + ++P+A F +LL + ++ K V
Sbjct: 650 LSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVN 709
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L M + + YNI + K L + M+ G P+ T+ LI G+
Sbjct: 710 DILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGY 769
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G+L+ A K +T G + D + + LC+ E + A + + G P+
Sbjct: 770 CKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNV 829
Query: 358 STMKSLVTGLASISKVAEA 376
T SL G EA
Sbjct: 830 DTYNSLFNGFVRTCSFDEA 848
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 129/287 (44%), Gaps = 7/287 (2%)
Query: 111 ERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+R HS++L Y ++ +D A++ ++ G + LN +L+ + +N E+K F
Sbjct: 758 DRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLN-VLVSKLCERN--EIKMAF 814
Query: 170 TEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
++ G+ PN +TYN + F + IL + P F L+ G
Sbjct: 815 DLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGM 874
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ + ++ M+ G++S + I+ L + ++++EA +L ML I P +
Sbjct: 875 CRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTV 934
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ L+H + KEGN+ A +L + M + D + + LC G+ + A K+
Sbjct: 935 ATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEE 994
Query: 348 SMAKGWVPHFSTMKSLVTG-LASISKVAEANELIGLMKKRFPKSGDM 393
+ P+ S L+ L + + + E+ +L+ ++ R S D+
Sbjct: 995 MEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLRTRELMSLDL 1041
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 35/242 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++P++ +N ++ + G S V IL+ MR +S+ N + +LL G+ K H
Sbjct: 684 GVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARC 743
Query: 237 GKVLQMMEKCGIA-------------------------------SGVNV----YNIRIQS 261
K+ M G A G V N+ +
Sbjct: 744 SKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSK 803
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LC+ + A L+ + G+ PN+DTY L +GF + + + A+ + ++ G P
Sbjct: 804 LCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPT 863
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
F +C+ G + A+++ G M +++ GLA K EA ++G
Sbjct: 864 CKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILG 923
Query: 382 LM 383
+M
Sbjct: 924 IM 925
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 5/204 (2%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMR---RKSIRPNATDFGLLLAGFYKEHKYEDV 236
P+S TY +I C G V ++L R + + PN + L+ G KE +
Sbjct: 616 PDSFTYTSLIAGLCRKG--KMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAA 673
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + M G+ +N+ + + + + +L M SR + NL TY L+HG
Sbjct: 674 LYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHG 733
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K + KL+ M G PD + C+ G + A+K R +G+
Sbjct: 734 YSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVD 793
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T+ LV+ L +++ A +L+
Sbjct: 794 CFTLNVLVSKLCERNEIKMAFDLV 817
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 20/218 (9%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A++ + M +GLR + ALL G + V + E ++ G+ +Y
Sbjct: 335 IEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVL-ERMRMDGVRVGHISYT 393
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE-------------HKY 233
+I C++G +L +M + S+ P+ F +L+ GF K + Y
Sbjct: 394 TMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNY 453
Query: 234 EDVGKVLQ------MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+G + + +M + G S ++ + S C+ R EEA+ +D M G+ P+
Sbjct: 454 CKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSS 513
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
T+ +I +G G+ A +F M + G P + +
Sbjct: 514 VTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTY 551
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/211 (18%), Positives = 90/211 (42%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
++G P+ T++ +I +C+SG L ++ + + + +L++ + ++ +
Sbjct: 752 IHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIK 811
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+++ + G+ V+ YN + +EA+ +L +L G P + LI
Sbjct: 812 MAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLI 871
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G + GN++GA +L M G L + + + A ++ + +
Sbjct: 872 RGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQII 931
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P +T +L+ VA+A EL +M++
Sbjct: 932 PTVATFTTLMHTYCKEGNVAKALELRSVMEQ 962
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N F LL+ +E+ D + ++M G + V N+ + SL K + + +
Sbjct: 108 NPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFF 167
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M++ + PN+ T+ L++ + G + A L M G P + + + C+
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKK 227
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G Y+ A ++ A +KG T L+ L S+ A+ ++ M+K
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRK 277
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 66/348 (18%), Positives = 133/348 (38%), Gaps = 58/348 (16%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
R+ D+ L P + + + ++ +S+ F +S +LE ++ +R +
Sbjct: 339 LRLCDVMVSHGLRP----NEVTYGALLNGISKHAQFGLVSSVLERMRM-DGVRVGHISYT 393
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I + +++ A+Q ++M K + + + L+ G F K
Sbjct: 394 TMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNG----------------FLKT 437
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+ PN ++ +I ++C+ G+ + A M + + +L+A F + + E+
Sbjct: 438 -GLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEE 496
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK---- 291
+ M + G+A ++ I + + +A ++ D M S G P+ TY+
Sbjct: 497 AEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLK 556
Query: 292 -------------------HLIHGFG------------KEGNLEGAKKLFASMTNGGCEP 320
+ + G + GNL A L M P
Sbjct: 557 GLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVP 616
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-PHFSTMKSLVTGL 367
DS+ + LC+ G+ AL + ++ KG + P+ + SLV GL
Sbjct: 617 DSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGL 664
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ + TY +I+ C++ + ++ EM I PN + LL G+ K ++EDV
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
GKV M + GI V +Y I SLCK+ ++++A ++D M+ RG++PN+ TY LI+
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINC 264
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG---W 353
KEG+++ A + M+ G PD + L E + A+ + M +G
Sbjct: 265 MCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE-EMVRGKNIV 323
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ T S++ GL I ++ +A ++ +M++
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 12/279 (4%)
Query: 118 IVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+V YG A +D A++ EM + G+ +V ++LL G S +E+V ++F
Sbjct: 150 VVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E + GIEP+ Y +I S C+ G + + ++ M R+ + PN + +L+ KE
Sbjct: 210 EMSE-KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKE 268
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG---IKPNL 287
++ VL+ M + G+A V YN I+ L + +EA LL+ M+ RG +KPN+
Sbjct: 269 GSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNV 327
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ +I G G + A ++ A M GC + + + L + + A+++
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G P T L+ G + +V A +L+ M+ R
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 35/289 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI-EPNSETY 185
+ A+ ++M + G+ V N L+ G +E + E + I +PN T+
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI+ C+ G + + A M N + LL+ G + HK +++ M
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL------------------ 287
G+ Y+I I+ CK+ + + A+ LL M RGI+P L
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450
Query: 288 ----------------DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
Y +IHG K G+L+ AK+L S+ + G PD+ + +
Sbjct: 451 ARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ G+ E A V + A G++P + SL+ G ++ ++ + ELI
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI 559
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR---RKSIRPNATDF 220
E + P V ++ +YN V+ + C G ++L M + RPNA +
Sbjct: 63 EATSLLDALPSVR----DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+L+ + + +L+ M G+ + V Y I+ LC ++A L+ M
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
GI+PN+ Y L+ G+ K G E K+F M+ G EPD + LC+ G+ +
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKK 238
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A V + +G P+ T L+ + V EA IG++KK
Sbjct: 239 AHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA---IGVLKK 280
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ +Y ++++ C + +L MR +R + +G L+ G + + ++
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + GI V VY+ +Q CK R E+ + M +GI+P++ Y LI K
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A + M G EP+ + + +C+ G + A+ V + KG P T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 360 MKSLVTGLASISKVAEANELI 380
+L+ GL+ + ++ EA L+
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLL 313
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 123/298 (41%), Gaps = 5/298 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
D + ++ + LS + LLEE+ ++ + +S V+ G ++ + A
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS-VIQGLCDIGRMRQAF 347
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q M++ G ++ N L+ G + + + E + G+EP+S TY+ +IK
Sbjct: 348 QVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL-GLEPDSFTYSILIKG 406
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ +L+ MR + I P + LL ++ E + M+
Sbjct: 407 FCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLD 465
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y+ I CK + AK LL ++ G+ P+ TY +I+ F K G++E A +
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
MT G PD F GE L++ R + K + +L T L +
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVA 583
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH-VHSIVLYGQANMIDHAMQ 132
D +SI + + + LL ++ R + E FH + +V + M++ A
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG--IEPELFHYIPLLVAMCEQGMMERARN 453
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F EMD V A + ++ G + + + K + G+ P++ TY+ VI F
Sbjct: 454 LFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD-EGLTPDAVTYSIVINMF 511
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+SGD + +L +M P+ F L+ G+ + + V ++++ M IA
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGM 278
+ + SL S E KALL +
Sbjct: 572 KIISTLSTSLVA---SNEGKALLQSL 594
>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
Length = 833
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 5/233 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++H F + K G R + N LL G +K +E I +G PN +YN
Sbjct: 211 LEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYN 270
Query: 187 KVIKSFCESG---DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV-LQM 242
++K FC ++ + ++A+ + S P+ + ++ GF++E + + + LQM
Sbjct: 271 TLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQM 330
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+++ GI V YN I LCK + + AKA+ ML +G+KP+ TY LIHG+ G
Sbjct: 331 IDR-GIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGK 389
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ +L M+ EPD + + + +LC+ G A + + + KG P
Sbjct: 390 WKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKP 442
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 22/276 (7%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYG------- 177
MID A+ F++M + GL +V AL+ C L + + + + +VYG
Sbjct: 445 MIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKW 504
Query: 178 --------------IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
I + +N ++ C G ++ M R +RP+ + L
Sbjct: 505 EKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTL 564
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G + ++ K+L +M G+ YN + CK +R ++A +LL ML G
Sbjct: 565 VDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGP 624
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P++ TY ++HG + G AK+L+ +M N + D Y + + LC+ + A K
Sbjct: 625 TPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFK 684
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ ++ +KG H T ++ L K +A +L
Sbjct: 685 MFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDL 720
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 1/235 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + E M + G+R V + N L+ G L+ +E ++ + G++PN TYN ++
Sbjct: 542 AQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSI-GLKPNEFTYNTLL 600
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C++ YS+L EM P+ + +L G ++ ++ + ++ M
Sbjct: 601 HGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQ 660
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YNI + LCK +EA + + S+G++ ++ T+ +I K G E A L
Sbjct: 661 WDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDL 720
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
FA+++ G PD + + L + G E + A G P+ + +LV
Sbjct: 721 FATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALV 775
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 126/280 (45%), Gaps = 36/280 (12%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++D A F++M G++ S N L+ G + + ++EV R+ E + +EP+
Sbjct: 351 KAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEM-STHDLEPDC 409
Query: 183 ETYNKVIKSFCESG---DSSSVYS------------------ILAEMRRKSIRPNATDFG 221
Y ++ C++G ++ +++ I +MR++ + PN ++G
Sbjct: 410 FIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYG 469
Query: 222 LLLAGFYKEHKYED-VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ K + +D + K QM+ + + LC +++ E+A+ L+ ML
Sbjct: 470 ALIDALCKLGRVDDAILKFNQMINE-------------VYGLCTVEKWEKAEELVFEMLD 516
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+GI+ ++ + L+ +EG + A++L M G PD + C G +
Sbjct: 517 QGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDE 576
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
A K+ ++ G P+ T +L+ G ++ +A L+
Sbjct: 577 AAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLL 616
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 4/207 (1%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ TY+ +I FC G +++ + + R N F LL G + ++
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250
Query: 238 KV-LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIK--PNLDTYKHL 293
+ L M + G V YN ++ C R+EEA LL M +G+ P++ +Y +
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I+GF +EG ++ A LF M + G PD + LC+ + A V + + KG
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI 380
P T L+ G S K E L+
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLL 397
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 94/228 (41%), Gaps = 33/228 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P+ TYN VI C++ ++ +M K ++P+ + L+ G+ K+++V
Sbjct: 334 GIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEV 393
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK------------ 284
++L+ M + +Y + + LCK R EA+ + D ++ +GIK
Sbjct: 394 VRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIF 453
Query: 285 ---------PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
PN+ Y LI K G ++ A F M N Y LC
Sbjct: 454 DKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE------------VYGLCTV 501
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
++E A ++ + +G +L+ L +V EA LI LM
Sbjct: 502 EKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELM 549
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 72/175 (41%), Gaps = 4/175 (2%)
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA- 271
+ P+ + +L+ F + + E V ++ K G V+N ++ LC KR +EA
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG---GCEPDSYCFFMF 328
LL M G PN+ +Y L+ GF E E A +L M + C PD +
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ G+ + A + + +G P T +++ GL V A + M
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQM 365
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/174 (18%), Positives = 69/174 (39%), Gaps = 6/174 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + ++ + L Q F+ +L + R + ++I+L G + N +D A
Sbjct: 627 DVVTYNTILHGLFQTGRFSEAKELYLNMINS---RTQWDMYTYNIILNGLCKNNCVDEAF 683
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F+ + GL+ + N ++ + E+ +F YG+ P+ ETY + ++
Sbjct: 684 KMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATI-SAYGLVPDVETYCLIAEN 742
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ G + + + M PN+ L+ F G L +++
Sbjct: 743 LIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDE 796
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 4/212 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TY +I+ C++ D + +L EM I PN + LL G+ K ++E V
Sbjct: 124 GVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESV 183
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
GKV + M GI V +Y I SLC+ + ++A ++D M RG++PN+ TY LI+
Sbjct: 184 GKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINS 243
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-- 354
KEG++ A L +M+ G +PD + L E + A+ + M +G
Sbjct: 244 MCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLE-EMMQGETRV 302
Query: 355 -PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T S++ GL I + +A ++ +M +
Sbjct: 303 RPDLMTFNSVIHGLCKIGWMRQALQVRAMMAE 334
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R+ + P++ PN+ +Y ++++ C ++ +L M+ +RP+ +G L+ G
Sbjct: 80 RVMSHEPRLAS-RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRG 138
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ ++L M + GI V VY+ + CK R E + + M RGI+P+
Sbjct: 139 LCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPD 198
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ Y LI + G ++ A ++ MT G EP+ + + +C+ G AL + +
Sbjct: 199 VVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRK 258
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
KG P T +L+TGL+S+ ++ EA L+
Sbjct: 259 NMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 21/298 (7%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALN 150
+++ RPD +V YG A +D A++ EM + G+ +V +
Sbjct: 120 MQDCGVRPD-----------VVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYS 168
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
LL G + +E V ++F E GIEP+ Y +I S C G ++ M
Sbjct: 169 CLLHGYCKTGRWESVGKVFEEMSG-RGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTE 227
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+ + PN + +L+ KE + + + M + G+ V YN I L + +E
Sbjct: 228 RGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDE 287
Query: 271 AKALLDGMLS--RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
A ALL+ M+ ++P+L T+ +IHG K G + A ++ A M GC + F +
Sbjct: 288 AMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLL 347
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L + + + A+++ + G P T L+ G + +V A + M+ +
Sbjct: 348 IGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQ 405
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 35/275 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK-VYGIEPNSETY 185
+ A+ + M + G++ V N L+ G +E + E + + P+ T+
Sbjct: 250 VREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTF 309
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI C+ G + A M R N F LL+ G + HK + +++ M
Sbjct: 310 NSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMAS 369
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------------------- 286
G+ Y+I I CK+++ E A++ L M +G++P
Sbjct: 370 SGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQ 429
Query: 287 -------------LD--TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
LD Y +IHG K G + A++ M + G PD+ + +
Sbjct: 430 ARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINM 489
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G+ A +V + A G+VP + SL+ G
Sbjct: 490 FAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQG 524
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%)
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y +++LC +R+ +A LL M G++P++ TY LI G +++ A +L M
Sbjct: 97 YTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G EP+ + + C+ G +E+ KV +G P +L+ L KV
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVK 216
Query: 375 EANELIGLMKKR 386
+A ++ +M +R
Sbjct: 217 KAARVMDMMTER 228
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%), Gaps = 19/221 (8%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
R+ ++D + L P+S +SI ++ + L E++ +
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDS----FTYSILINGFCKMRQVERAESYLSEMRHQ--- 405
Query: 108 RQNERFHVHSIVLYG---QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
E VH I L M+ A F EMD+ + A + ++ G S
Sbjct: 406 -GMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIHGAFKSGE--- 460
Query: 165 VKRIFTEFPKVY---GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
K+I EF K G+ P++ TY+ I F +SGD ++ +L +M P+ F
Sbjct: 461 -KKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFD 519
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
L+ G+ + E + ++ + M +A + + + SL
Sbjct: 520 SLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 13/313 (4%)
Query: 81 AVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL--YGQANMIDHAMQTFE 135
+ +L +A ++ LLE + R PD+ HS+++ +A+ I A + +
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDM------ATHSMLINELCKADKIQEAQEFLQ 433
Query: 136 EMDK--YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
MD+ S + N+LL +K + IF+ P+ +Y+ +I FC
Sbjct: 434 GMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFC 493
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + + +M + PN T + L G ++ + D V + M G + V
Sbjct: 494 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVI 553
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I ++ ++A L + M+SRG +PN TY L+HG KE + A +LF M
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 613
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC+PD + Y C G+ E A++V ++KG P L+ G K
Sbjct: 614 VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 673
Query: 374 AEANELIGLMKKR 386
EA +L +M R
Sbjct: 674 GEAKQLFQVMVSR 686
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 7/274 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +++SI + + + +L +++ DL ++ L G + I A
Sbjct: 481 DVVSYSILIDGFCKIDELGRAEKLYKQM---IDLNCVPNVTTYNAFLNGLMRKGRIADAQ 537
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+EEM G V + L+ G L++ +++ +F E G PN+ TYN ++
Sbjct: 538 GVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF-ETMISRGCRPNAVTYNCLLHG 596
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ + + +M + P+ + LL GF K E +V M G
Sbjct: 597 LCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN ++ + + EAK L M+SR KP+ ++ +I G K L+ A ++F
Sbjct: 657 VVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFE 716
Query: 312 SM-TNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
M + GC PD + + LC A+KV
Sbjct: 717 RMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKV 750
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN + G + + EM P+ + L+ GF K++ ++
Sbjct: 515 PNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHEL 574
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M G YN + LCK + +EA L M+ RG P+ TY L++GF
Sbjct: 575 FETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCN 634
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G +E A ++F M + G +PD + + G+ A ++ + +++ P +
Sbjct: 635 VGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVS 694
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
++ GL+ ++ +A E+ M++ S D+
Sbjct: 695 HNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDL 728
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 2/199 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + FE M G R + N LL G +E +F + + G +P+ TY
Sbjct: 569 DQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE-RGCDPDRVTYTT 627
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC G + EM K P+ + LL GF++ K + ++ Q+M
Sbjct: 628 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQ 687
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+NI I L K KR ++A + + M G P+L TY LI G E L A
Sbjct: 688 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 747
Query: 307 KKLFASMTNGGCEPDSYCF 325
K+F + PD + F
Sbjct: 748 MKVFKEIDRLKLSPDPHAF 766
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 106/296 (35%), Gaps = 36/296 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A Q FE+M G+ + L+ +N +E R F E G +P+S Y
Sbjct: 145 LKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVD-KGFKPSSTLYQ 203
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
KV + +G + K + LL F + K + K+ + M K
Sbjct: 204 KVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKS 263
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEA--------------------KALLDGMLSRG---- 282
G +Y+ + + CKL+ +EA A L G+ G
Sbjct: 264 GCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQ 323
Query: 283 -----------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ + Y LI + G ++ A++ + +P S
Sbjct: 324 AFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQE 383
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
LC+ G ++AL + + +G+ P +T L+ L K+ EA E + M ++
Sbjct: 384 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKI 439
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 97/249 (38%), Gaps = 39/249 (15%)
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
ET VIK + G++ + + L + ++ + + + LL + + G+V +
Sbjct: 98 ETVGAVIKHLRDGGEALTFFRWL---QARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEK 154
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL---IHGFGK 299
M G+ Y + +QS C + S+EA M+ +G KP+ Y+ + + GK
Sbjct: 155 MVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGK 214
Query: 300 EG--------NLEG------------------------AKKLFASMTNGGCEPDSYCFFM 327
EG +LE A KLF +M GC+PD+ +
Sbjct: 215 EGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSY 274
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVP-HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ + A K+ + P + + ++GL K+ +A E M++
Sbjct: 275 MVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES 334
Query: 387 FPKSGDMWN 395
S +++
Sbjct: 335 LSSSQPVYD 343
>gi|297723459|ref|NP_001174093.1| Os04g0618050 [Oryza sativa Japonica Group]
gi|222629567|gb|EEE61699.1| hypothetical protein OsJ_16179 [Oryza sativa Japonica Group]
gi|255675780|dbj|BAH92821.1| Os04g0618050 [Oryza sativa Japonica Group]
Length = 363
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 3/292 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+S+ + +L+ F+ + +LL + R ++ F I +YG AN + A++T
Sbjct: 74 YSMMIDRLASCRRFSDVEELLARARAE-RFRFSDEFFYRLIKMYGNVANHPEKAIETLFA 132
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M Y S N +L + + YE V ++ ++ G+ ++ +N ++K C+ G
Sbjct: 133 MPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRL-GVTLDTCCFNILVKGLCQFG 191
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+L EM ++ PN T + L+ + + + ++ + M+K I + VYN
Sbjct: 192 KFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYN 251
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I LC+ +R EA L M+ +G PN TY+ L+ G G AK L + M
Sbjct: 252 ILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAE 311
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
P F + LC + A V + + +G+VP T LVT +
Sbjct: 312 RMRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRVGTWTKLVTSMC 363
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ F +L + +YE V +V + G+ +NI ++ LC+ + +A +L
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISL 199
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M +G PN+ TY L++ + G ++ A +L M D+ + + LC+
Sbjct: 200 LYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCR 259
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
A + ++ + KG P+ T + L+ GL S K EA L+ +M+ + G
Sbjct: 260 EQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPG 316
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 4/192 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD F+I V L Q F LL E+ + + N + + Q +D A +
Sbjct: 175 LDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCV-PNVTTYSTLMNFLCQHGQVDKAFE 233
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF-TEFPKVYGIEPNSETYNKVIKS 191
E M K + N L+ G + E +F + PK G PNS TY ++
Sbjct: 234 LCERMQKEDIVADAVVYNILIAGLCREQRVTEAFNLFKSMVPK--GCYPNSGTYQVLLDG 291
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
SG +++ MR + +RP + F LL+ G + +D VL+ M + G
Sbjct: 292 LLSSGKFVEAKGLVSMMRAERMRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPR 351
Query: 252 VNVYNIRIQSLC 263
V + + S+C
Sbjct: 352 VGTWTKLVTSMC 363
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 186 NKVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N+++K F D S + S R+ +PN + +++ ++ DV ++L
Sbjct: 39 NELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEELLARAR 98
Query: 245 KCGIASGVNVYNIRIQSLCKL-----KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
A + L K+ E+A L M P+ T+ +++H
Sbjct: 99 ----AERFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVC 154
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ E +++ S + G D+ CF + LCQ G++ A+ + +G VP+ +T
Sbjct: 155 KRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTT 214
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+L+ L +V +A EL M+K
Sbjct: 215 YSTLMNFLCQHGQVDKAFELCERMQK 240
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 9/311 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF-- 134
A V +L+ A + + L+E++ R + E V +I + +A D A++TF
Sbjct: 57 AHEATVRRLAAAGDLDGVQYTLQEMRLR-GVACPEGALVAAICAFARAGAADRALKTFYR 115
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
D +V N LL + V ++ K G+EPN TYN +IK+ C+
Sbjct: 116 ARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKA-GVEPNVYTYNLLIKALCQ 174
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + +L EM RK RP+ +++ K + ++ +L M G +
Sbjct: 175 NDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS----- 229
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN + +LC R E ++D M+ RG++P+ Y ++ F K L A + A M
Sbjct: 230 YNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMV 289
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC P+ F + G+ AL + +A+GW P + L+ GL I +
Sbjct: 290 TEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLK 349
Query: 375 EANELIGLMKK 385
A + M K
Sbjct: 350 RALFVFSCMGK 360
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 8/322 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+++ + L Q + A ++L+E+ R R +E H I + + +D A EM
Sbjct: 165 YNLLIKALCQNDRVGAARRMLDEM-ARKGCRPDEVSHTTIISALCKLDRLDEARGILAEM 223
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
G S +A+ L G EV + E G+ P++ Y ++ +FC++ +
Sbjct: 224 TPVG--ASYNAVVHALCG---QFRMREVFLVVDEMVH-RGLRPDTVAYTSIVGAFCKARE 277
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ILA M + PN F +L+ GF+ + K D + M G A YN+
Sbjct: 278 LRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNV 337
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I+ LC + + A + M P++ TY LI GF K G+L+ A ++ MTN G
Sbjct: 338 LIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAG 397
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA- 376
C+P+ + LC+ ++ A + + P+ T +L+ L + + A
Sbjct: 398 CKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRAL 457
Query: 377 NELIGLMKKRFPKSGDMWNAAL 398
N G+ + P + +N L
Sbjct: 458 NVFHGMRRYGCPPNDRTYNELL 479
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 5/263 (1%)
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PD+R I + +A +D AM + +M G + +V ++ +++
Sbjct: 365 PDVRTYSTL----IDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQ 420
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
+ + + + PN+ T+N +I+S C+ G + ++ MRR PN + LL
Sbjct: 421 AENLIDKM-SLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELL 479
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G ++E ED ++L M G + YN I LC+++ +EA LL M+ +GI+
Sbjct: 480 HGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQ 539
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ T+ +IH + KEGN+ A + M C + + LC + + A+
Sbjct: 540 PDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVY 599
Query: 345 CRASMAKGWVPHFSTMKSLVTGL 367
+ +G P+ +T LV G+
Sbjct: 600 LLKMLYEGICPNEATWNVLVRGI 622
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 86/207 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ +YN +I+ C GD + + M + P+ + L+ GF K +
Sbjct: 327 GWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVA 386
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M G V VY + LCK ++A+ L+D M PN T+ LI
Sbjct: 387 MSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRS 446
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G A +F M GC P+ + + L + G E AL++ + G+
Sbjct: 447 LCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELS 506
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
+ + ++GL + + EA L+G M
Sbjct: 507 LVSYNTTISGLCQMRMIKEAMILLGRM 533
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 143/316 (45%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D + +S +S L + +++EE+ + N ++I++ +A +D A
Sbjct: 9 DVVTYSTIISGLCKTGKVTEALEMVEEMTEKG---VNPDVATYTIIVDRLCRAGKVDEAD 65
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F +M + G + A NAL+ G +N E ++ E G EP++ TYN ++
Sbjct: 66 ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS-KGYEPDNITYNTILSG 124
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG--IA 249
C G S M + P+ + LL YKE K + + + M+ +A
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I C++++++EA L ++++G P+ TY ++ G ++ N++ A+++
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M + GC P+ + + C+ G L++ K + P +++ L
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304
Query: 370 ISKVAEANELIGLMKK 385
KV +A++++ M K
Sbjct: 305 AKKVDDAHKVLEEMSK 320
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D AM+ F+++ G N++LLG N +E + +F + G PN TY+
Sbjct: 204 DEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD-SGCAPNGATYSI 262
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
V+ C G+ + + EM K P+ ++ K K +D KVL+ M K G
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V YNI + LCK ++A L M+ G P++ +Y +++G K + A+
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 382
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M PD F + LC+ G+ + A + +P T +L+ GL
Sbjct: 383 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGL 442
Query: 368 ASISKVAEANELIGLMKKR 386
+ EA L M ++
Sbjct: 443 CRDKRTDEAVRLFQYMVEK 461
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 41/258 (15%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP+ TY+ +I C++G + ++ EM K + P+ + +++ + K ++
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G ++ YN I LCK + E A LL+ M S+G +P+ TY ++ G
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSG 124
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPD-------------------SYCFF----------- 326
+ G + AK+ F SM + G PD ++ F
Sbjct: 125 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVA 184
Query: 327 --MFTY-----FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ TY C+ + + A+K+ + +AKG++P T S++ GLA S + EA E
Sbjct: 185 PDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEE- 243
Query: 380 IGLMKKRFPKSGDMWNAA 397
M K+ SG N A
Sbjct: 244 ---MFKKMVDSGCAPNGA 258
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 14/316 (4%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIV-LYGQANMIDHAMQT 133
+SI +S + + +L EE+ + PD+ ++++ + +A +D A +
Sbjct: 260 YSIVLSGHCRVGNMARCLELYEEMTEKRFSPDV-----LLCNAVIDMLCKAKKVDDAHKV 314
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM K G V N LL G + ++ +F+ G P+ +Y+ V+ C
Sbjct: 315 LEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD-NGCAPDIVSYSVVLNGLC 373
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM-EKCGIASGV 252
++ + M + + P+ F +L+ G K K ++ +L +M E + GV
Sbjct: 374 KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGV 433
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ + LC+ KR++EA L M+ +G ++ + ++ G +EG L A F S
Sbjct: 434 TCTTL-MHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKS 492
Query: 313 M--TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M ++G PD + L + G + A+ + G P + +L+ GL
Sbjct: 493 MVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQ 552
Query: 371 SKVAEANELIGLMKKR 386
+ +A+ L MK++
Sbjct: 553 GRHIQADRLTQAMKEK 568
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 137/348 (39%), Gaps = 41/348 (11%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQT 133
+A++ ++ L + + +LLEE+ ++ N ++ +L G M + A Q
Sbjct: 81 VAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT---ILSGLCRMGKVSEAKQF 137
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-YGIEPNSETYNKVIKSF 192
F+ M G V A N LL E +F + P+ TYN +I F
Sbjct: 138 FDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGF 197
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C + + ++ K P+ + +L G ++ ++ ++ + M G A
Sbjct: 198 CRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNG 257
Query: 253 NVYNI-----------------------------------RIQSLCKLKRSEEAKALLDG 277
Y+I I LCK K+ ++A +L+
Sbjct: 258 ATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEE 317
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M G P++ TY L+ G K ++ A +LF++M + GC PD + + LC+ +
Sbjct: 318 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 377
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A + + + VP T L+ GL K+ EA +L+ +M +
Sbjct: 378 VHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M K P+ + +++G K K + ++++ M + G+ V Y I + LC+ +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA L M+ RG N Y LI+G K+ N+E A KL M + G EPD+ +
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC+ G+ A + + ++G+ P L+ L KVAEA L M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 130/291 (44%), Gaps = 15/291 (5%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QAN 125
SP D + + + L +A + ++LEE+ PD+ ++I+L G + N
Sbjct: 289 SP-DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVV------TYNILLDGLCKTN 341
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++D A + F M G + + + +L G + + + +F + + P+ T+
Sbjct: 342 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIE-RKLVPDVVTF 400
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ C++G +L M ++ P+ L+ G ++ + ++ ++ Q M +
Sbjct: 401 NILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE 460
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRG-IKPNLDTYKHLIHGFGKEGNL 303
G + V +NI + LC+ + +A M+ S G P++ TY L++ + G +
Sbjct: 461 KGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRV 520
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ A F MT GC PD + L + G + A ++ +A KG++
Sbjct: 521 DQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 571
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M EK G V Y+ I LCK + EA +++ M +G+ P++ TY ++ + G
Sbjct: 1 MAEK-GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAG 59
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ A +LF M GC ++ + LC+ E A K+ +KG+ P T
Sbjct: 60 KVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYN 119
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
++++GL + KV+EA + M R
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSR 144
>gi|195640760|gb|ACG39848.1| hypothetical protein [Zea mays]
Length = 359
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 9/247 (3%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
AL+ALL ++ Y+ R F P GI+P ++N ++K+ SGD ++ +++ E
Sbjct: 87 ALSALLSAYHDNRLYDRTVRAFNTLPAELGIKPGLVSHNVLLKALVASGDVAAAHTLFDE 146
Query: 208 MRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--EKCGIASGVNVYNIRIQSLCK 264
M + ++P+ +L G+ + ++++ + K + V YN+R+ LC
Sbjct: 147 MPDTAGVQPDIVSCNEILKGYLNAGDADAFDRLVKEIAGPKRRLKPNVGTYNLRMALLCS 206
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT------NGGC 318
RS EA+ LLD M + G+ PN ++ +I G EG + A LF M G
Sbjct: 207 KMRSFEAEELLDVMGANGVPPNRTSFNTVIKGLCNEGEVGAAMALFKRMPEVPRQHGKGV 266
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
P+ + M L + ++ AL++C+ + W P F +K LV GL K A E
Sbjct: 267 SPNFETYIMLLEALVKKNLFDPALEICKECLRNKWAPPFQAVKGLVQGLLKSRKAKHARE 326
Query: 379 LIGLMKK 385
+ M+K
Sbjct: 327 VFMAMRK 333
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 114/261 (43%), Gaps = 5/261 (1%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +D ++ +M K G+ NAL+ G +E +F E K G EPN +
Sbjct: 142 NHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVK-RGHEPNVIS 200
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y VI C++G++S + +M + +PN + ++ K+ D + L M
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ GI V YN + C L + EA L M+ R + PN T+ L+ G KEG +
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320
Query: 305 GAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A+ +F +MT G EPD +Y M Y C A KV + KG P +
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGY--CLQRLMNEAKKVFEIMIRKGCAPGAHSYNI 378
Query: 363 LVTGLASISKVAEANELIGLM 383
L+ G ++ EA L+ M
Sbjct: 379 LINGYCKSRRMDEAKSLLAEM 399
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 1/254 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+++ AM+ EM + G+ +V N+++ G E R+F E + PN+ T+
Sbjct: 248 LVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVG-RDVMPNTVTF 306
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ C+ G S + M K + P+ + + L+ G+ + + KV ++M +
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G A G + YNI I CK +R +EAK+LL M + + P+ TY L+ G + G +
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF M + G P+ + + C+ G + ALK+ ++ K P+ L+
Sbjct: 427 ALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486
Query: 366 GLASISKVAEANEL 379
G+ K+ A EL
Sbjct: 487 GMFIAGKLEVAKEL 500
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFC 193
+MD + + +V +LN +L+ C+ N+ V + K++ GI P++ T+N +I C
Sbjct: 118 QMDLFRVTHNVYSLN-ILINCLCRLNH--VDFSVSVLGKMFKLGIHPDAITFNALINGLC 174
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G + EM ++ PN + ++ G K V + ME+ G V
Sbjct: 175 NEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVV 234
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I SLCK + +A L M+ RGI PN+ TY ++HGF G L A +LF M
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
P++ F + LC+ G A V KG P ST +L+ G +
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354
Query: 374 AEANELIGLMKKR 386
EA ++ +M ++
Sbjct: 355 NEAKKVFEIMIRK 367
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F++M++ G + +V + ++ + + +E + GI PN TYN ++
Sbjct: 217 AVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVE-RGIPPNVFTYNSIV 275
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G + + EM + + PN F +L+ G KE + V + M + G+
Sbjct: 276 HGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVE 335
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
++ YN + C + EAK + + M+ +G P +Y LI+G+ K ++ AK L
Sbjct: 336 PDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSL 395
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M + PD+ + LCQ G + AL + + + G P+ T L+ G
Sbjct: 396 LAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCK 455
Query: 370 ISKVAEANELIGLMKKR 386
+ EA +L+ MK++
Sbjct: 456 HGHLDEALKLLKSMKEK 472
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 141/319 (44%), Gaps = 7/319 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDH 129
P + ++ V N ++L +E+ R + F +I++ G + M+
Sbjct: 265 PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF---TILVDGLCKEGMVSE 321
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A FE M + G+ + NAL+ G L + E K++F E G P + +YN +I
Sbjct: 322 ARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF-EIMIRKGCAPGAHSYNILI 380
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+S S+LAEM K++ P+ + L+ G + + ++ + + M G
Sbjct: 381 NGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPH 440
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y I + CK +EA LL M + ++PN+ Y LI G G LE AK+L
Sbjct: 441 PNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKEL 500
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F+ + G PD + + L + G + A + R G++P+ + ++ G
Sbjct: 501 FSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQ 560
Query: 370 ISKVAEANELIG-LMKKRF 387
+ A LI ++ KRF
Sbjct: 561 NQDSSTAIRLIDEMVGKRF 579
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 135/314 (42%), Gaps = 12/314 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--IDHA 130
+ +S + L + N + L E+ R P++ F +SIV +G N+ ++ A
Sbjct: 234 VTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNV-----FTYNSIV-HGFCNLGQLNEA 287
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F+EM + + L+ G E + +F + G+EP+ TYN ++
Sbjct: 288 TRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTE-KGVEPDISTYNALMD 346
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C + + M RK P A + +L+ G+ K + ++ +L M +
Sbjct: 347 GYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNP 406
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y+ +Q LC+L R +EA L M S G PNL TY L+ GF K G+L+ A KL
Sbjct: 407 DTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLL 466
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
SM EP+ + + + G+ E A ++ G P T ++ GL
Sbjct: 467 KSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKE 526
Query: 371 SKVAEANELIGLMK 384
EA +L M+
Sbjct: 527 GLSDEAYDLFRKME 540
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 112/244 (45%), Gaps = 1/244 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +++ A + FE M + G + N L+ G S+ +E K + E + P
Sbjct: 348 YCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH-KALNP 406
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TY+ +++ C+ G ++ EM PN + +LL GF K ++ K+L
Sbjct: 407 DTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLL 466
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ + + Y I I+ + + E AK L + G +P++ TY +I G KE
Sbjct: 467 KSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKE 526
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A LF M + G P+S + + Q + TA+++ + K + + ST
Sbjct: 527 GLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTF 586
Query: 361 KSLV 364
+ L+
Sbjct: 587 QMLL 590
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M R + RP+ +FG L F K+ +Y V + M+ + V NI I LC+L
Sbjct: 84 MVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNH 143
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+ + ++L M GI P+ T+ LI+G EG ++ A +LF M G EP+ +
Sbjct: 144 VDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTT 203
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ G A+ V + G P+ T +++ L V +A E + M +R
Sbjct: 204 VINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVER 262
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ + K + SF + S+V S+ +M + N +L+ + + + V
Sbjct: 91 PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M K GI +N I LC + +EA L + M+ RG +PN+ +Y +I+G K
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCK 210
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
GN A +F M GC+P+ + LC+ A++ + +G P+ T
Sbjct: 211 TGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFT 270
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
S+V G ++ ++ EA L M R
Sbjct: 271 YNSIVHGFCNLGQLNEATRLFKEMVGR 297
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 35/325 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELK-TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++ I V L + F + L E++ TR + +E F H Y +A++ A++ F
Sbjct: 117 SYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFW-HVFTAYSRADLPQDAIRAFN 175
Query: 136 EMDKYGLRQSVDALNALLLGCILSKN-------YEEVKRIFTEFPKVYGI---------- 178
M ++G+R VD L+ LL K+ +++VK +F K Y I
Sbjct: 176 RMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGD 235
Query: 179 EPNSE----------------TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
N++ YN ++++ C+ G Y + EM + P+A + +
Sbjct: 236 SNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSI 295
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+ +E+ V +VL+ ++ + V YN I+ LCK + EEA +LD M+ RG
Sbjct: 296 FIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERG 355
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P+ +Y + + A L M C PD + + M L + G ++ A
Sbjct: 356 VTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRAN 415
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGL 367
+V + +G+ P ST ++ G
Sbjct: 416 EVWESMGKRGFYPSVSTYAVMIHGF 440
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR--RKSIRPNATDFGLLL 224
R F ++ G EP+ ++Y+ V+ SG + ++ L E+R R S+ + F +
Sbjct: 100 RFFLWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHEL-FWHVF 158
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
+ + +D + M + GI +GV+ + + +LCK K A+ D + S
Sbjct: 159 TAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKS-VFN 217
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P++ TY L G+G G+ A+K+F M GC D + LC+GG+ + A K+
Sbjct: 218 PSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKM 277
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 153/344 (44%), Gaps = 47/344 (13%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLL---EELKTRPDLRQNERFHVHSIVLYG--QANMI 127
+D+++++ ++ L + + +LL E+ TRP++ +++ ++ G + ++
Sbjct: 113 MDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVV------MYNTIIDGLCKDKLV 166
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + EMD G+ +V + L+ G L+ E + E + I PN TY
Sbjct: 167 NEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMI-LKNINPNVYTYTI 225
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ + C+ G ++LA M ++ ++PN + L+ G+ + ++ ++ M + G
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG------ 301
+ V YNI I LCK KR +EA LL +L + + PN TY LI GF K G
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345
Query: 302 -----------------------------NLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
NL+ A LF M G +P+ Y + L
Sbjct: 346 DLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
C+GG ++ A K+ + + KG + T +++GL + EA
Sbjct: 406 CKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEA 449
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN YN +I C+ + Y + +EM + I PN + L+ GF + + +
Sbjct: 148 PNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGL 207
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M I V Y I + +LCK + +EAK LL M G+KPN+ +Y L+ G+
Sbjct: 208 LNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCL 267
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G ++ AK++F +M G P+ Y + + LC+ + A+ + R + K VP+ T
Sbjct: 268 IGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVT 327
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
SL+ G + ++ A +L+ M R
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEMYHR 354
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K G++ +V + N L+ G L + K++F + G+ PN +YN +I C+S
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ-KGVNPNVYSYNIMIDRLCKSK 304
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
++L E+ K++ PN + L+ GF K + +L+ M G + V Y
Sbjct: 305 RVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYT 364
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ +LCK + ++A AL M RGI+PN TY LI G K G + A+KLF +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVK 424
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
GC + + + + LC+ G + AL + G +P T + ++ L + +A
Sbjct: 425 GCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKA 484
Query: 377 NELI 380
+L+
Sbjct: 485 EKLL 488
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 141/333 (42%), Gaps = 20/333 (6%)
Query: 73 LDRMAFSIAVS----KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
L +M FS V KL + ++ L++ L + +++++ FH + Q + +
Sbjct: 58 LGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVS 117
Query: 129 HA---------------MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+A ++ ++ R +V N ++ G K E +++E
Sbjct: 118 YATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM- 176
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
GI PN TY+ +I FC +G + +L EM K+I PN + +L+ KE K
Sbjct: 177 DARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKV 236
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ +L +M K G+ V YN + C + + AK + M+ +G+ PN+ +Y +
Sbjct: 237 KEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIM 296
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I K ++ A L + + P++ + C+ G +AL + + +G
Sbjct: 297 IDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQ 356
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ L + +A L MK+R
Sbjct: 357 PADVVTYTSLLDALCKNQNLDKATALFMKMKER 389
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 1/225 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ +A Q F M + G+ +V + N ++ SK +E + E + PN+ TY+
Sbjct: 271 VQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH-KNMVPNTVTYS 329
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ G +S +L EM + + + LL K + + M++
Sbjct: 330 SLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 389
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI Y I LCK R + A+ L +L +G + N+ TY +I G KEG L+ A
Sbjct: 390 GIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEA 449
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
+ + M GC PD+ F + L + + + A K+ +AK
Sbjct: 450 LAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 36/262 (13%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA-- 217
K+Y +F + +V GIEP+ T N +I FC G + +++L ++ + +PN
Sbjct: 24 KHYPTAISLFKQM-QVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTIT 82
Query: 218 ---------------------------------TDFGLLLAGFYKEHKYEDVGKVLQMME 244
+ LL G K + K+L+M+E
Sbjct: 83 LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIE 142
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
V +YN I LCK K EA L M +RGI PN+ TY LI+GF G L
Sbjct: 143 DRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLM 202
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A L M P+ Y + + LC+ G+ + A + +G P+ + +L+
Sbjct: 203 EAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLM 262
Query: 365 TGLASISKVAEANELIGLMKKR 386
G I +V A ++ M ++
Sbjct: 263 DGYCLIGEVQNAKQMFHTMVQK 284
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 90/245 (36%), Gaps = 43/245 (17%)
Query: 180 PNSETYNKVIKS-----------------------------------FCESGDSSSVYSI 204
P +NK++ S FC G + +++
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV----YNIRIQ 260
L ++ + +PN L+ G + +V K L +K +A G + Y +
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKG---EVKKSLHFHDKV-VAQGFQMDQVSYATLLN 123
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK+ + A LL + R +PN+ Y +I G K+ + A L++ M G P
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + Y C G+ A + + K P+ T L+ L KV EA L+
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243
Query: 381 GLMKK 385
+M K
Sbjct: 244 AVMTK 248
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 7/241 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+++I + +L ++ + LL E+ ++ N + I + + I A+ +E
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLLREV-LHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKE 350
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G V +LL ++N ++ +F + K GI+PN TY +I C+ G
Sbjct: 351 MYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM-KERGIQPNKYTYTALIDGLCKGG 409
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ + + K R N + ++++G KE ++ + ME+ G +
Sbjct: 410 RHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFE 469
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I+SL + ++++A+ LL M+++ + D HG + A+KL M
Sbjct: 470 IIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRD-----FHGERSPNENDKAEKLLHEMIAK 524
Query: 317 G 317
G
Sbjct: 525 G 525
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 2/176 (1%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P +F ++ K Y + + M+ GI + NI I C L + + +
Sbjct: 8 PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L +L G +PN T L+ G +G ++ + + G + D + LC+
Sbjct: 68 LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
GE +ALK+ R + P+ +++ GL V EA +L M R FP
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 138/317 (43%), Gaps = 14/317 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+F+ ++ L++ H++ + L +++ PDL I N I+ +
Sbjct: 93 SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNIL----INCLCNVNRINEGLAA 148
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ + G V L+ G + E ++F K+ G PN TY +IK C
Sbjct: 149 MAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKL-GCTPNVVTYGTLIKGLC 207
Query: 194 ESGDSSSVYSILAEMRRKS------IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
G+ + EM + RPN + +++ G K +E+ + M G
Sbjct: 208 ALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQG 267
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V +++ I LCK + +AK LL+ M+ GI PNL TY LI GF G+L AK
Sbjct: 268 VQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAK 327
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF SM + G EPD + M C+ + E A+K+ + G P T L+ L
Sbjct: 328 ELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKAL 387
Query: 368 ASISKVAEANELIGLMK 384
KV +A EL ++K
Sbjct: 388 FLAGKVDDAKELFRVIK 404
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 12/266 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A Q F+ M +S+ + N LL G ++Y +V ++ + + G+ P+ T N
Sbjct: 77 VTQAHQFFDLM-----MRSIFSFNRLLAGLAKIEHYSQVFSLYKQM-HLAGLWPDLLTLN 130
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C + + +A + R+ P+ F L+ G EH+ + K+ M+K
Sbjct: 131 ILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKL 190
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR------GIKPNLDTYKHLIHGFGKE 300
G V Y I+ LC L A ML+ +PN+ +Y +I G K
Sbjct: 191 GCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKV 250
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN E A LF M + G +P+ F + LC+ G+ A K+ + G VP+ T
Sbjct: 251 GNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTY 310
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ G + + A EL M +
Sbjct: 311 TSLIKGFCLVGDLNSAKELFVSMPSK 336
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 139/318 (43%), Gaps = 4/318 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+++SI + L + ++ L E+ + F V +L + +I A + E
Sbjct: 238 ISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIK-AKKLLE 296
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M + G+ ++ +L+ G L + K +F P G EP+ +YN +I +C++
Sbjct: 297 MMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPS-KGYEPDVISYNMLINGYCKT 355
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ EM + P+ G+LL + K +D ++ ++++ + + +
Sbjct: 356 LKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCIC 415
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + LCK EA L + + S +K +++T+ LI G K G LE A +LF +
Sbjct: 416 CIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYE 475
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G +PD+ + + C+ G+ + A + + G P T L+ G +K+ +
Sbjct: 476 EGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEK 535
Query: 376 ANELIGLM--KKRFPKSG 391
+L+ M K +P G
Sbjct: 536 VVQLLHRMIEKDVWPDDG 553
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 1/224 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ++ AM+ F EM G+ V LL L+ ++ K +F K Y +
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVI-KPYAMPK 410
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ + C++G + E+ +++ + FG L+ G K K E ++
Sbjct: 411 DLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELF 470
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ + + GI Y+ I CK + ++A L M G P+L TY L+ GF +
Sbjct: 471 EKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYES 530
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
LE +L M PD + + +C+ +Y+ L +
Sbjct: 531 NKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDL 574
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSET 184
I AM+ F E++ Y ++ ++ L+ G + E +F K+Y GI+P++
Sbjct: 428 IFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFE---KLYEEGIQPDAMA 484
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ +I FC+ G + +M P+ + +L+ GFY+ +K E V ++L M
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMI 544
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + +Y I +CK ++ +E LL
Sbjct: 545 EKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 20/314 (6%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
+E L +P++ +H L G+ A F+ M GL N+ + G
Sbjct: 242 METLGVKPNVVTYNTI-IHGHCLRGK---FQRARVIFQTMKDKGLEPDCYTYNSFISGLC 297
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
EE + + + G+ PN+ TYN +I +C GD Y+ EM K I +
Sbjct: 298 KEGRLEEASGLICKMLEG-GLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASL 356
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ L + + E + D +++ M + G+ +NI I C+ ++ A LLD
Sbjct: 357 VTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDE 416
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M+ +GI+P L TY LI+ GK ++ A LF+ + G PD F C G
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR----------- 386
+ A ++ + +P T +L+ G KV EA +L+ MK+R
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536
Query: 387 ----FPKSGDMWNA 396
+ K GDM +A
Sbjct: 537 LISGYSKRGDMKDA 550
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 6/249 (2%)
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-----GIEPNSETYNKVIKSFCESGD 197
R VDA L+ +L + Y E+K+ Y G PN ET N+++ F +
Sbjct: 138 RDRVDAKTTLIFD-LLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNR 196
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ + + AEM R +IR + F +++ KE K + + + ME G+ V YN
Sbjct: 197 TQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNT 256
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I C + + A+ + M +G++P+ TY I G KEG LE A L M GG
Sbjct: 257 IIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGG 316
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P++ + C G+ + A ++KG + T + L ++ +A+
Sbjct: 317 LVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDAD 376
Query: 378 ELIGLMKKR 386
+I M+++
Sbjct: 377 NMIKEMREK 385
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A +EM G+ S+ N + + + + E + G+ P++ T+N
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM-REKGMMPDAVTHN 395
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C GD+ + +L EM K I+P + L+ K ++ ++ + +++
Sbjct: 396 ILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQE 455
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + V+N I C + A LL M + + P+ TY L+ G+ +EG +E A
Sbjct: 456 GLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEA 515
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++L M G +PD + + G+ + A +V M G+ P T +L+ G
Sbjct: 516 RQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQG 575
Query: 367 LASISKVAEANELIGLM 383
L + A EL+ M
Sbjct: 576 LCKNQEGEHAEELLKEM 592
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 3/206 (1%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T+N +I C+ G + M ++PN + ++ G K++ + Q M
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G+ YN I LCK R EEA L+ ML G+ PN TY LI G+ +G+L
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A M + G + +F + L G A + + KG +P T L
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397
Query: 364 VTGLASISKVAEANELIGLMKKRFPK 389
+ G + +A GL+ + K
Sbjct: 398 INGYC---RCGDAKRAFGLLDEMVGK 420
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 142/311 (45%), Gaps = 1/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +++ + + + ++L ++ L +ER + I Y + ID A++ +
Sbjct: 297 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 356
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + GL+ ++ N+L+ G E + + T + ++P+S +YN ++ +C
Sbjct: 357 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD-WNLKPDSYSYNTLLDGYCRE 415
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +S +++ +M ++ I P + LL G + ++D ++ +M K G+A Y
Sbjct: 416 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGY 475
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ + L K++ E A L +L+RG + T+ +I G K G + A+++F M +
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC PD + C+ A KV A + P SL++GL ++ E
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVE 595
Query: 376 ANELIGLMKKR 386
+L+ M R
Sbjct: 596 XTDLLTEMGIR 606
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+EPN TY+ +I + GD + +L M K + N + LL+ G+ K+ K ++
Sbjct: 256 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 315
Query: 237 GKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
KVL+ M E+ + Y + I C+ + ++A LLD ML G+K NL LI+
Sbjct: 316 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 375
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+ K G + A+ + M + +PDSY + C+ G A +C + +G P
Sbjct: 376 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 435
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ GL + +A ++ LM K
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMK 465
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 6/288 (2%)
Query: 98 LEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
+E L P++ HS++ Y ++ A + M + G+ ++V L+ G
Sbjct: 252 MENLGVEPNI-----VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 306
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+E +++ + + P+ Y +I +C +G +L EM R ++ N
Sbjct: 307 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 366
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
L+ G+ K + + V+ M + YN + C+ + EA L D
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCD 426
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
ML GI+P + TY L+ G + G + A +++ M G PD + L +
Sbjct: 427 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKME 486
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+E A + + +A+G+ T ++++GL + K+ EA E+ MK
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 149/380 (39%), Gaps = 73/380 (19%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQ 132
R+ F+ +S L + ++ +++K DL + + ++ Y +A+ + A +
Sbjct: 507 RITFNTMISGLCKMGKMVEAEEIFDKMK---DLGCSPDGITYRTLIDGYCKASNVGQAFK 563
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M++ + S++ N+L+ G S+ E + TE + G+ PN TY +I +
Sbjct: 564 VKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEM-GIRGLTPNIVTYGALIDGW 622
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--------E 244
C+ G +S EM + N +++G Y+ + ++ ++Q M
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682
Query: 245 KCGIASGVN------------------------VYNIRIQSLCKLKRSEEAKA------- 273
+C + S + VYNI I LCK + ++A+
Sbjct: 683 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 742
Query: 274 ----------------------------LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
L D ML RG+ PN+ TY LI+G K N++
Sbjct: 743 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 802
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++LF + G P+ + C+ G + A K+ + +G P T +L+
Sbjct: 803 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862
Query: 366 GLASISKVAEANELIGLMKK 385
GL + + +L+ M K
Sbjct: 863 GLCKHGDIERSMKLLNQMIK 882
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
+L + + N + Q + + PD + + + A+ +D + +TF L
Sbjct: 659 RLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTF-------LL 711
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
+ N + G + ++ +R F+ + G P++ TY +I + +G+ +
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSML-SLKGFVPDNFTYCTLIHGYSAAGNVDEAFR 770
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+ EM R+ + PN + L+ G K + ++ + + G+ V YN I C
Sbjct: 771 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 830
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD-- 321
K+ + A L D M+ GI P++ TY LI+G K G++E + KL M G +
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890
Query: 322 SYCFFMFTYFLCQGG 336
YC L QGG
Sbjct: 891 EYC------TLVQGG 899
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+Q + M K G+ + LL G +N+E ++ + G + T+N
Sbjct: 454 DDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI-LARGFTKSRITFNT 512
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G I +M+ P+ + L+ G+ K KV ME+
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ + +YN I L K +R E LL M RG+ PN+ TY LI G+ KEG L+ A
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP-HFSTMKSLVTG 366
+ MT G + L + G + A + + + G+ P H +KS +
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR- 691
Query: 367 LASISKVAEA 376
A+I K+A++
Sbjct: 692 YAAIQKIADS 701
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 2/252 (0%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A L+ G + ++ R+ E ++ G++ N N +I +C+ G+ ++
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRL-GLKTNLFICNSLINGYCKRGEIHEAEGVITR 392
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M +++P++ + LL G+ +E + + M + GI V YN ++ LC++
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
++A + M+ G+ P+ Y L+ G K N EGA L+ + G F
Sbjct: 453 FDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
LC+ G+ A ++ G P T ++L+ G S V +A ++ G M++
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572
Query: 387 FPKSGDMWNAAL 398
S +M+N+ +
Sbjct: 573 ISPSIEMYNSLI 584
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ YN I C++G + + K P+ + L+ G+ ++ ++
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M + G+ + YN I LCK + + A+ L + +G+ PN+ TY LI G+ K
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
GN++ A KL M G P + LC+ G+ E ++K+ + G
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891
Query: 360 MKSLVTG 366
+LV G
Sbjct: 892 YCTLVQG 898
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 146/358 (40%), Gaps = 42/358 (11%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSI------AVSKLSQANHFNAISQ 96
R + +L+ ES+P AP + R+ + A+SKL+ + +
Sbjct: 26 RTLLWKLRDESHP------------APPELVSRICRLVLLRRCNAISKLNFVFSDDIVDA 73
Query: 97 LLEELKTRPDL----------RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
+L L+ P +QN R +V S Y + I + ++E Y L Q V
Sbjct: 74 VLRNLRLNPTASLGFFQFVSKQQNFRPNVKS---YCKLVHILSRGRMYDETRAY-LNQLV 129
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
D G ++ ++E+ ++ EF P ++ ++K + E G + + +
Sbjct: 130 DLCKFKDRGNVI---WDELVGVYREF----AFSPT--VFDMILKVYVEKGLTKNALYVFD 180
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
M + P+ LL K + V Q M + GI V + +I + + CK
Sbjct: 181 NMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG 240
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ +EA + M + G++PN+ TY LI+G+ G++E AK + M+ G + +
Sbjct: 241 KVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYT 300
Query: 327 MFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ C+ + + A KV R + VP L+ G K+ +A L+ M
Sbjct: 301 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
V++I + G + +D A + F + G L+ G + N +E R+ E
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G+ PN TYN +I C+S + + ++ +K + PN + L+ G+ K
Sbjct: 776 LR-RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ K+ M + GI+ V Y+ I LCK E + LL+ M+ G+ L Y
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGC 318
L+ G K N K A N C
Sbjct: 895 LVQGGFKTSNYNEMSKPEALKQNMNC 920
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%)
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
T F ++L + ++ ++ V M KCG + N + +L K + A +
Sbjct: 157 TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 216
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M+ GI P++ +++ F K+G ++ A M N G EP+ + G+
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
E A V + KG + T L+ G K+ EA +++ M++
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 232 KYEDVGKVLQMMEKCGI----ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K++D G V+ E G+ A V+++ ++ + ++ A + D M G P+L
Sbjct: 133 KFKDRGNVI-WDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSL 191
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
+ L++ K G A ++ M G PD + + C+ G+ + A +
Sbjct: 192 RSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKK 251
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G P+ T SL+ G S+ V A ++ M ++
Sbjct: 252 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 290
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I+ A + + M G+ +L+ G EE +F + ++ G+ P
Sbjct: 272 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI-GLVP 330
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN +I +C GD +S EM +K I P+ + + LL+ + E + + ++
Sbjct: 331 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 390
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K GI YNI I + +++A L + MLS+GI+P TY LI+ +
Sbjct: 391 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 450
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
++ A LF + + G PD F C G E A + + K P T
Sbjct: 451 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 510
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G KV EA L+ MK+R
Sbjct: 511 NTLMQGRCREGKVEEARMLLDEMKRR 536
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L+ + N ++ A + EM + + +V N +++ + + + R F F + G +
Sbjct: 201 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFN-IMVNVLCKEGKLKKAREFIGFMEGLGFK 259
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN +YN +I + G+ IL MR K I P++ +G L++G KE + E+ +
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 319
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M + G+ YN I C E A + D M+ +GI P++ TY L+H
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 379
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG + A + M G PD+ + + + G + A + ++KG P T
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 439
Query: 360 MKSLVTGLASISKVAEANEL 379
SL+ L+ +++ EA++L
Sbjct: 440 YTSLIYVLSRRNRMKEADDL 459
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 6/259 (2%)
Query: 132 QTFEEM----DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ F+E+ D+ ++ S+ + L+ C + +E + F K GI P ET N
Sbjct: 140 ELFDELTLSRDRLSVKSSI-VFDLLVRVCCELRRADEAFKCFYMM-KEKGIVPKIETCND 197
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ F + + + AEM R I F +++ KE K + + + ME G
Sbjct: 198 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 257
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V YN I E A+ +LD M +GI+P+ TY LI G KEG LE A
Sbjct: 258 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 317
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M G P++ + C G+ E A + KG +P ST LV L
Sbjct: 318 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 377
Query: 368 ASISKVAEANELIGLMKKR 386
++ EA+++I M+K+
Sbjct: 378 FMEGRMGEADDMIKEMRKK 396
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 123/286 (43%), Gaps = 36/286 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A +EM K G+ SV N L+ + E + E K GI P++ TYN
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK-KGIIPDAITYN 406
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + G++ + + EM K I P + L+ + ++ ++ + + +
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466
Query: 247 GIASGV--------------NV---------------------YNIRIQSLCKLKRSEEA 271
G++ V NV +N +Q C+ + EEA
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ LLD M RGIKP+ +Y LI G+G+ G+++ A ++ M + G P +
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
LC+ E + A ++ + + KG P ST SL+ G+ ++ + E N
Sbjct: 587 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 632
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 150/332 (45%), Gaps = 9/332 (2%)
Query: 63 CGASLAPE----SPLDRMAFSIAVSKLSQANHFNAISQLLEE---LKTRPDLRQNERFHV 115
C + L P P + F IA+S A + Q+ ++ LK +P+L +
Sbjct: 115 CNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLI 174
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
+V Y + I A + F++M K G+ V N L+ G L E+ +
Sbjct: 175 -GLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+ + P++ TYN ++K+ + G S V +L +M+R + PN + L+ G+ K ++
Sbjct: 234 FNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+++++M++ I + YNI I +C E L+D M S ++P++ TY LI
Sbjct: 294 AFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLID 353
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL-KVCRASMAKGWV 354
G + G AKKL M N G +P+ + +LC+ + E KV G+
Sbjct: 354 GCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFS 413
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T +L+ + ++ A E++ M ++
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/445 (20%), Positives = 186/445 (41%), Gaps = 73/445 (16%)
Query: 1 MALLYRLRTNFNLKTVNYRNLATSSLLSAGDEAAALT-----IKEKKRATIA-------- 47
+ +L R+ + FN VN N+ +++L A + L+ + + KR +
Sbjct: 224 LGMLERMVSEFN---VNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNN 280
Query: 48 ------RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNA---ISQLL 98
+L S F+I+++ ++ P D ++I ++ + A + ++
Sbjct: 281 LVYGYCKLGSLKEAFQIVELMKQTNILP----DLCTYNILINGVCNAGSIREGLELMDVM 336
Query: 99 EELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
+ LK +PD+ ++ ++ G + + A + E+M+ G++ + N L
Sbjct: 337 KSLKLQPDVV------TYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWL 390
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+ EEV R E +++G P+ TY+ +IK++ + GD S ++ EM +K I+ N
Sbjct: 391 CKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMN 450
Query: 217 A-----------------------------------TDFGLLLAGFYKEHKYEDVGKVLQ 241
+G L+ G+++E K E ++
Sbjct: 451 TITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWD 510
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M++ I V +N I LC ++E A D + G+ P+ T+ +I G+ KEG
Sbjct: 511 EMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEG 570
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+E A + + +PD+Y + LC+ G E AL + + V T
Sbjct: 571 RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTV-TYN 629
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
++++ K+ EA +L+ M+++
Sbjct: 630 TMISAFCKDKKLKEAYDLLSEMEEK 654
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 6/195 (3%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I+ Y + ++ A + ++EM + + +V N+L+ G E F E + G
Sbjct: 493 IMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAE-SG 551
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ T+N +I +C+ G + E + S +P+ +LL G KE E
Sbjct: 552 LLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTE--- 608
Query: 238 KVLQMMEKCGIASGVNV--YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
K L V+ YN I + CK K+ +EA LL M + ++P+ TY +I
Sbjct: 609 KALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIIT 668
Query: 296 GFGKEGNLEGAKKLF 310
++G L A +L
Sbjct: 669 SLMEDGKLSEADELL 683
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 83/215 (38%), Gaps = 2/215 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + K G L++G + E+ ++ E ++ I P T+N
Sbjct: 467 VDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRI-KITPTVTTFN 525
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G + E+ + P+ F ++ G+ KE + E + K
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
NI + LCK +E+A + +++ + + TY +I F K+ L+ A
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEA 644
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
L + M EPD + + L + G+ A
Sbjct: 645 YDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEA 679
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 116 HSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+SI+L Y + ++ A + + E K+ + N LL G E+ F
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-- 617
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ E ++ TYN +I +FC+ Y +L+EM K + P+ + ++ ++ K
Sbjct: 618 ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLS 677
Query: 235 DVGKVLQ 241
+ ++L+
Sbjct: 678 EADELLK 684
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I+ A + + M G+ +L+ G EE +F + ++ G+ P
Sbjct: 294 YSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI-GLVP 352
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN +I +C GD +S EM +K I P+ + + LL+ + E + + ++
Sbjct: 353 NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMI 412
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K GI YNI I + +++A L + MLS+GI+P TY LI+ +
Sbjct: 413 KEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRR 472
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
++ A LF + + G PD F C G E A + + K P T
Sbjct: 473 NRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 532
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G KV EA L+ MK+R
Sbjct: 533 NTLMQGRCREGKVEEARMLLDEMKRR 558
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 1/260 (0%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L+ + N ++ A + EM + + +V N +++ + + + R F F + G +
Sbjct: 223 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFN-IMVNVLCKEGKLKKAREFIGFMEGLGFK 281
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN +YN +I + G+ IL MR K I P++ +G L++G KE + E+ +
Sbjct: 282 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 341
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M + G+ YN I C E A + D M+ +GI P++ TY L+H
Sbjct: 342 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 401
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG + A + M G PD+ + + + G + A + ++KG P T
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 461
Query: 360 MKSLVTGLASISKVAEANEL 379
SL+ L+ +++ EA++L
Sbjct: 462 YTSLIYVLSRRNRMKEADDL 481
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 114/259 (44%), Gaps = 6/259 (2%)
Query: 132 QTFEEM----DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ F+E+ D+ ++ S+ + L+ C + +E + F K GI P ET N
Sbjct: 162 ELFDELTLSRDRLSVKSSI-VFDLLVRVCCELRRADEAFKCFYMM-KEKGIVPKIETCND 219
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ F + + + AEM R I F +++ KE K + + + ME G
Sbjct: 220 MLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLG 279
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V YN I E A+ +LD M +GI+P+ TY LI G KEG LE A
Sbjct: 280 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 339
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M G P++ + C G+ E A + KG +P ST LV L
Sbjct: 340 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 399
Query: 368 ASISKVAEANELIGLMKKR 386
++ EA+++I M+K+
Sbjct: 400 FMEGRMGEADDMIKEMRKK 418
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 36/292 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ A +EM K G+ SV N L+ + E + E K GI P
Sbjct: 364 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK-KGIIP 422
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I + G++ + + EM K I P + L+ + ++ ++ +
Sbjct: 423 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 482
Query: 241 QMMEKCGIASGV--------------NV---------------------YNIRIQSLCKL 265
+ + G++ V NV +N +Q C+
Sbjct: 483 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ EEA+ LLD M RGIKP+ +Y LI G+G+ G+++ A ++ M + G P +
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
LC+ E + A ++ + + KG P ST SL+ G+ ++ + E N
Sbjct: 603 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 654
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 5/267 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI--FTEFPKVYGIEPNSET 184
I A F E+ K GLR + + N L+ G S+N +E R+ E ++Y P+ T
Sbjct: 239 IRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY---PDVFT 295
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ +I C+ G + EM+++ +RPN F L+ G Y+ + + M
Sbjct: 296 YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQML 355
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ + +YN + LCK+ +A+ L+D M G+KP+ TY LI G+ KEG+LE
Sbjct: 356 TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLE 415
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A ++ M G D+ F C+ G A + R + G P +T ++
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475
Query: 365 TGLASISKVAEANELIGLMKKRFPKSG 391
G V +L+ M+ K G
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPG 502
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%), Gaps = 5/292 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +S+ + L + + QL +E++ R LR N I ++ +D AM T
Sbjct: 292 DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR-GLRPNGITFTALIDGQYRSRRMDSAMNT 350
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ +M G++ + N LL G + + +++ E K+ G++P+ TY +I +C
Sbjct: 351 YHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM-KMVGMKPDKITYTTLIDGYC 409
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD S I M + + + F L++GF ++ + D + L+ M + G+
Sbjct: 410 KEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDA 469
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + I CK + LL M G KP + TY L++G K+G ++ A L +M
Sbjct: 470 TYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAM 529
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
N G PD + + C+ G+ E LK+ KG + ++ SLV+
Sbjct: 530 LNLGVTPDDITYNILLEGHCKNGKAEDLLKL---RNEKGLIVDYAYYTSLVS 578
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 141/296 (47%), Gaps = 12/296 (4%)
Query: 76 MAFSIAVSKLSQANHFNA---ISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
++F+ ++ L ++ + + + + +EE + PD+ +S++++G + +D A
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDV------FTYSVLIHGLCKEGRLDVA 312
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q F+EM + GLR + AL+ G S+ + + + + G++P+ YN ++
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTM-GVKPDLVMYNTLLN 371
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ GD + ++ EM+ ++P+ + L+ G+ KE E ++ + M + G+
Sbjct: 372 GLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ I C+ R +A+ L M+ G+KP+ TY +I G+ K+GN++ KL
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +P + + LC+ G+ + A + A + G P T L+ G
Sbjct: 492 KEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
++ Y + + A+Q F + + LL I S + + ++E + YG
Sbjct: 160 MIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILE-YG 218
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P + YN +I FC+ G I E+R++ +RP F L+ G K ++
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ + ME+ I V Y++ I LCK R + A+ L D M RG++PN T+ LI G
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ ++ A + M G +PD + LC+ G+ A K+ G P
Sbjct: 339 YRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDK 398
Query: 358 STMKSLVTGLASISKVAEANEL 379
T +L+ G + A E+
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEI 420
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V NAL+ G ++E + E G++PN +Y+ VI + G+ ++
Sbjct: 244 VPVYNALIHGVCKECRFKEAFDLMNEMVD-RGVDPNVISYSTVISCLSDMGNVELSLAVF 302
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
M + RPN F L+ GF+ + D + +M + G++ V YN I LC
Sbjct: 303 GRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSD 362
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+EA ++ + M I+PN+ TY +I+GF K G+L A + + M N GC P+ +
Sbjct: 363 GNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVY 422
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LCQ ++ A + ++ G P T + + GL +V A ++ M+K
Sbjct: 423 TCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEK 482
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 1/195 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ ++ F M G R +V +L+ G + + ++ + G+ PN YN
Sbjct: 295 VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIR-EGVSPNVVAYN 353
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G+ S+ +M + SIRPN T + ++ GF K + M C
Sbjct: 354 TLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V VY + LC++ ++A L+D M+S G P + T+ + I G + G +E A
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473
Query: 307 KKLFASMTNGGCEPD 321
+ M C P+
Sbjct: 474 MNVLDQMEKYECLPN 488
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 86/212 (40%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V G PN +T+ +IK F G + M R+ + PN + L+ G + +
Sbjct: 307 VRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMD 366
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ V MEK I V Y+ I K A + M++ G +PN+ Y ++
Sbjct: 367 EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMV 426
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ + A L +M + GC P F F LC+ G E A+ V +
Sbjct: 427 DVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECL 486
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T L+ GL + EA LI +++R
Sbjct: 487 PNIRTYNELLDGLFRANAFREACGLIRELEER 518
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I + + V +L +M+ +++ + F ++ + + + E K+ +
Sbjct: 76 TYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRI 135
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G V +YN+ + +L + AL + M S G++PN+ TY L+ + G +
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+GA KL M+N GC+PD + +C+ G+ + A +A + P +L
Sbjct: 196 DGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA-----RELAMKFEPVVPVYNAL 250
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ G+ + EA +L+ M R
Sbjct: 251 IHGVCKECRFKEAFDLMNEMVDR 273
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 106/286 (37%), Gaps = 48/286 (16%)
Query: 129 HAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
H T+E M DK G +D ++ LL + K+ + + E +
Sbjct: 72 HTHLTYETMIDKLGRNNEMDGVSYLL-----------------QQMKLENVPCSQELFQF 114
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VIK + S + +R P+ + L+L ++ ++ + + M+ G
Sbjct: 115 VIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEG 174
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN--------------------- 286
+ V YN+ +++LC+ + + A LL M ++G P+
Sbjct: 175 LEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAR 234
Query: 287 ---------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
+ Y LIHG KE + A L M + G +P+ + L G
Sbjct: 235 ELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGN 294
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
E +L V +G P+ T SL+ G +V +A L LM
Sbjct: 295 VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM 340
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 129/310 (41%), Gaps = 24/310 (7%)
Query: 86 SQANHFNAIS--QLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKYG 141
S N AIS +E+ RP++ +S ++YG A D A +T+ +M G
Sbjct: 361 SDGNMDEAISVWNQMEKDSIRPNVT------TYSTIIYGFAKSGDLVSACETWNKMINCG 414
Query: 142 LRQSVDA----LNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
R +V ++ L + + ++ + + ++ G P T+N IK C +G
Sbjct: 415 CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISD-----GCPPTVITFNNFIKGLCRAGR 469
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
++L +M + PN + LL G ++ + + + +++ +E+ + YN
Sbjct: 470 VEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNT 529
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT-NG 316
+ ++ LL ML GIK + T ++ + K G ++ A K+ +++
Sbjct: 530 IMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEK 589
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG----LASISK 372
D + + +C E A+ + +G P+ +T LV G L +
Sbjct: 590 EFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGHMGP 649
Query: 373 VAEANELIGL 382
+ +++IG+
Sbjct: 650 IRILDDIIGM 659
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 6/304 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFE 135
FS S + + H+ + L +E++ L + H SI++ + + +D +
Sbjct: 65 FSKLFSSIVRMGHYETVVYLSKEIEF---LGIEQDIHSLSILINCFCHLHRVDFGLSVLS 121
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
++ K GL S+ LL G + ++V ++ + V G++PN TYN +I S +S
Sbjct: 122 KILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM-LVRGLQPNVYTYNVIINSLSKS 180
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++ L +M + PN ++ L+ G+ + ++ V +M G V Y
Sbjct: 181 GKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTY 240
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ CK++R EEA LLD L +G+ P++ T+ +I G + G A++LF +
Sbjct: 241 TSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICA 300
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P+ + + LC+ G E A + + P+ L+ L K+ +
Sbjct: 301 HGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKD 360
Query: 376 ANEL 379
EL
Sbjct: 361 GKEL 364
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 110/241 (45%), Gaps = 5/241 (2%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
++SK +AN + +E++ P++ N + L GQ +D A F+ M
Sbjct: 176 SLSKSGKANEALGFLKQMEKVGCVPNV-VNYSTLIDGYCLRGQ---MDEARSVFDLMVSK 231
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G +V +L+ G + EE ++ E + G+ P+ T+ +I C +G +
Sbjct: 232 GCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLR-KGLVPDIVTFTTIISGLCRAGRPLA 290
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ + PN +G+LL G K E+ + Q M++ + + +Y I I
Sbjct: 291 AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILID 350
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
SLCK + ++ K L ++ G+KPN+ TY L+ KEG + A KLF M GC P
Sbjct: 351 SLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410
Query: 321 D 321
D
Sbjct: 411 D 411
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 3/252 (1%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVK-RIFTEFPKVYGIEPNSETYNKVIKSFC 193
+E++ G+ Q + +L ++L+ C + + + ++ K+ G+EP+ T+ ++ C
Sbjct: 86 KEIEFLGIEQDIHSL-SILINCFCHLHRVDFGLSVLSKILKL-GLEPSIVTFTTLLNGLC 143
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G V + +M + ++PN + +++ K K + L+ MEK G V
Sbjct: 144 MEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVV 203
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I C + +EA+++ D M+S+G PN+ TY L++G+ K +E A +L
Sbjct: 204 NYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDET 263
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD F LC+ G A ++ R A G P+ T L+ GL +
Sbjct: 264 LRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNL 323
Query: 374 AEANELIGLMKK 385
EA L M++
Sbjct: 324 EEAFALFQEMQR 335
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 134/314 (42%), Gaps = 8/314 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH---VHSIVLYGQANMIDHAMQ 132
+ F+ ++ L + + L +++ R L+ N + ++S+ G+AN A+
Sbjct: 133 VTFTTLLNGLCMEGKMDQVMMLYDDMLVR-GLQPNVYTYNVIINSLSKSGKAN---EALG 188
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++M+K G +V + L+ G L +E + +F + G PN TY ++ +
Sbjct: 189 FLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVF-DLMVSKGCTPNVYTYTSLMNGY 247
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ +L E RK + P+ F +++G + + ++ + + G +
Sbjct: 248 CKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNI 307
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + + LCK EEA AL M +KPNL Y LI K G ++ K+LF+
Sbjct: 308 MTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSR 367
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
+ + G +P+ Y + LC+ G A K+ R G P ++ G
Sbjct: 368 LIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKD 427
Query: 373 VAEANELIGLMKKR 386
+ A +L+ M R
Sbjct: 428 PSMARQLVEEMVNR 441
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P ++K+ S G +V + E+ I + +L+ F H+ + V
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L + K G+ + + + LC + ++ L D ML RG++PN+ TY +I+ K
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G A M GC P+ + C G+ + A V ++KG P+ T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239
Query: 360 MKSLVTGLASISKVAEANELI 380
SL+ G I ++ EA +L+
Sbjct: 240 YTSLMNGYCKIERIEEAVQLL 260
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Query: 205 LAEMRRKSIR---PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
LA R +R P +F L + + YE V + + +E GI ++ +I I
Sbjct: 47 LASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINC 106
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
C L R + ++L +L G++P++ T+ L++G EG ++ L+ M G +P+
Sbjct: 107 FCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPN 166
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
Y + + L + G+ AL + G VP+ +L+ G ++ EA +
Sbjct: 167 VYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFD 226
Query: 382 LM 383
LM
Sbjct: 227 LM 228
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A Q F + +G ++ LL G N EE +F E + ++PN Y +I
Sbjct: 291 AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR-STVKPNLVIYTILI 349
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C+ G + + + + ++PN + L+ KE + K+ + ME+ G
Sbjct: 350 DSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCT 409
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
YN+ IQ + K A+ L++ M++RG + T
Sbjct: 410 PDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 12/308 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMID 128
D F+ + L + N + L++ + + PDL + IV+ G + ID
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV------TYGIVVNGLCKRGDID 238
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ ++M++ + V N ++ KN + +FTE GI PN TYN +
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN-KGIRPNVVTYNSL 297
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I+ C G S +L++M + I PN F L+ F KE K + K+ M K I
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y+ I C R +EAK + + M+S+ PN+ TY LI GF K ++ +
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M+ G ++ + + Q E + A V + ++ G +P T L+ GL
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 369 SISKVAEA 376
+ KV A
Sbjct: 478 NNGKVETA 485
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 139/311 (44%), Gaps = 12/311 (3%)
Query: 74 DRMAFSIAVSKLSQANHFN-AISQL--LEELKTRPDLRQNERFHVHSIVLYGQANM--ID 128
D + + I V+ L + + A+S L +E+ K P + +++ ++ N ++
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV------IYNTIIDALCNYKNVN 273
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ F EMD G+R +V N+L+ + + R+ ++ + I PN T++ +
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSAL 332
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +F + G + EM ++SI P+ + L+ GF + ++ + ++M
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 392
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V YN I+ CK KR +E L M RG+ N TY LIHGF + + A+
Sbjct: 393 FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQI 452
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+F M + G PD + + LC G+ ETAL V P T ++ G+
Sbjct: 453 VFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC 512
Query: 369 SISKVAEANEL 379
KV + +L
Sbjct: 513 KAGKVEDGWDL 523
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 139/345 (40%), Gaps = 39/345 (11%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFE 135
FS +S +++ N F+ + L E+++ +L + + +SI++ + + + + A+
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQ---NLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 136 EMDKYGLRQSVDALNALL---------------LGCILSKNYEEVKRIFTEFPK------ 174
+M K G + LN+LL +G ++ Y+ F
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 175 -------------VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
V G +P+ TY V+ C+ GD S+L +M + I P +
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
++ D + M+ GI V YN I+ LC R +A LL M+ R
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 320
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
I PN+ T+ LI F KEG L A+KL+ M +PD + + C + A
Sbjct: 321 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ ++K P+ T +L+ G +V E EL M +R
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F +M K S+ + LL ++ V + + + GI N TY+
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTYS 120
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC S ++LA+M + P+ LL GF ++ D ++ M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G +N I L + R+ EA AL+D M+ +G +P+L TY +++G K G+++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G EP + LC AL + KG P+ T SL+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 367 LASISKVAEANELIGLMKKR 386
L + + ++A+ L+ M +R
Sbjct: 301 LCNYGRWSDASRLLSDMIER 320
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 114/255 (44%), Gaps = 1/255 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++EM K + + ++L+ G + +E K +F E PN TYN +I
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLI 403
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K FC++ + EM ++ + N + L+ GF++ + ++ V + M G+
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL 463
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+I + LC + E A + + + ++P++ TY +I G K G +E L
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F S++ G +P+ + C+ G E A + R +G +P T +L+
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 370 ISKVAEANELIGLMK 384
A + ELI M+
Sbjct: 584 DGDKAASAELIREMR 598
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 128/307 (41%), Gaps = 3/307 (0%)
Query: 80 IAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK 139
I++++L+ +A++ + +K+RP E + S + + N D + E+M
Sbjct: 52 ISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAI--AKMNKFDLVISLGEQMQN 109
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G+ ++ ++L+ C ++ + G EP+ T N ++ FC S
Sbjct: 110 LGISHNLYTY-SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
S++ +M +P++ F L+ G ++ ++ + ++ M G + Y I +
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
LCK + A +LL M I+P + Y +I N+ A LF M N G
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
P+ + LC G + A ++ + + P+ T +L+ K+ EA +L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 380 IGLMKKR 386
M KR
Sbjct: 349 YDEMIKR 355
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 1/193 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A +D M+ F EM + GL + L+ G ++ + + +F + G+ P
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLP 464
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY+ ++ C +G + + ++R + P+ + +++ G K K ED +
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V Y + C+ EEA AL M G P+ TY LI ++
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 301 GNLEGAKKLFASM 313
G+ + +L M
Sbjct: 585 GDKAASAELIREM 597
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ + TY +I+ C++ + ++ EM I PN + LL G+ K ++EDV
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
GKV M + GI V +Y I SLCK+ ++++A ++D M+ RG++PN+ TY LI+
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINC 264
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG---W 353
KEG+++ A + M+ G PD + L E + A+ + M +G
Sbjct: 265 MCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE-EMVRGKNIV 323
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ T S++ GL I ++ +A ++ +M++
Sbjct: 324 KPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEE 355
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 12/279 (4%)
Query: 118 IVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+V YG A +D A++ EM + G+ +V ++LL G S +E+V ++F
Sbjct: 150 VVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFV 209
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E + GIEP+ Y +I S C+ G + + ++ M R+ + PN + +L+ KE
Sbjct: 210 EMSE-KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKE 268
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG---IKPNL 287
++ VL+ M + G+A V YN I+ L + +EA LL+ M+ RG +KPN+
Sbjct: 269 GSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNV 327
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ +I G G + A ++ A M GC + + + L + + A+++
Sbjct: 328 VTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE 387
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G P T L+ G + +V A +L+ M+ R
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 35/289 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI-EPNSETY 185
+ A+ ++M + G+ V N L+ G +E + E + I +PN T+
Sbjct: 271 VKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTF 330
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI+ C+ G + + A M N + LL+ G + HK +++ M
Sbjct: 331 NSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS 390
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL------------------ 287
G+ Y+I I+ CK+ + + A+ LL M RGI+P L
Sbjct: 391 LGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMER 450
Query: 288 ----------------DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
Y +IHG K G+L+ AK+L S+ + G PD+ + +
Sbjct: 451 ARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINM 510
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ G+ E A V + A G++P + SL+ G ++ ++ + ELI
Sbjct: 511 FAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELI 559
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 10/225 (4%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR---RKSIRPNATDF 220
E + P V ++ +YN V+ + C G ++L M + RPNA +
Sbjct: 63 EATSLLDALPSVR----DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+L+ + + +L+ M G+ + V Y I+ LC ++A L+ M
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
GI+PN+ Y L+ G+ K G E K+F M+ G EPD + LC+ G+ +
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKK 238
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A V + +G P+ T L+ + V EA IG++KK
Sbjct: 239 AHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA---IGVLKK 280
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ +Y ++++ C + +L MR +R + +G L+ G + + ++
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + GI V VY+ +Q CK R E+ + M +GI+P++ Y LI K
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A + M G EP+ + + +C+ G + A+ V + KG P T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 360 MKSLVTGLASISKVAEANELI 380
+L+ GL+ + ++ EA L+
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLL 313
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 123/298 (41%), Gaps = 5/298 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
D + ++ + LS + LLEE+ ++ + +S V+ G ++ + A
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNS-VIQGLCDIGRMRQAF 347
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q M++ G ++ N L+ G + + + E + G+EP+S TY+ +IK
Sbjct: 348 QVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSL-GLEPDSFTYSILIKG 406
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ +L+ MR + I P + LL ++ E + M+
Sbjct: 407 FCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLD 465
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y+ I CK + AK LL ++ G+ P+ TY +I+ F K G++E A +
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
MT G PD F GE L++ R + K + +L T L +
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVA 583
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 8/206 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH-VHSIVLYGQANMIDHAMQ 132
D +SI + + + LL ++ R + E FH + +V + M++ A
Sbjct: 396 DSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG--IEPELFHYIPLLVAMCEQGMMERARN 453
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F EMD V A + ++ G + + + K + G+ P++ TY+ VI F
Sbjct: 454 LFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD-EGLTPDAVTYSIVINMF 511
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+SGD + +L +M P+ F L+ G+ + + V ++++ M IA
Sbjct: 512 AKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDS 571
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGM 278
+ + SL S E KALL +
Sbjct: 572 KIISTLSTSLVA---SNEGKALLQSL 594
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A+SI + L + + +A + L+ E+ + + + + I + + ++ A
Sbjct: 314 DNVAYSILIDGLLKGRNADAANGLVHEMVSHG-FSIDPMMYDYFICVMSKEGAMEKAKAL 372
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M +G+ A +L+ G KN + + E K I + TY +K C
Sbjct: 373 FDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKK-RNIVISPYTYGTAVKGMC 431
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
SGD Y+I+ EM RPN + L+ F ++ ++ D +VL+ M + GIA
Sbjct: 432 SSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTF 491
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I L K K+ +EA++ L M+ G KP+ TY I G+ + G A K M
Sbjct: 492 CYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM 551
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P+ C+ G+ A R+ + +G + T L+ GL KV
Sbjct: 552 LECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKV 611
Query: 374 AEANELIGLMKKR 386
+A E+ M+ +
Sbjct: 612 NDAEEIFHEMRGK 624
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 2/308 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ AV + + + +++E+ R N + I + Q + A++ +E
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGA-SGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKE 480
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M + G+ N+L++G +K +E + E + G +P++ TY I + E+G
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE-NGFKPDAFTYGAFISGYIEAG 539
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ +S + EM + PN L+ + K+ K + + M + GI Y
Sbjct: 540 EFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYT 599
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ + L K + +A+ + M +GI P++ +Y LI GF K GN++ A +F M
Sbjct: 600 VLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQA 659
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G + + M C+ GE E A ++ KG+ P+ T +++ G +AEA
Sbjct: 660 GLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEA 719
Query: 377 NELIGLMK 384
+L MK
Sbjct: 720 FQLFDEMK 727
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 2/216 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI +++TY ++ ++G + I EMR K I P+ +G L+ GF K +
Sbjct: 590 GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKA 649
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M + G+ S V +YN+ + C+ E+AK LLD M +G PN TY +I G
Sbjct: 650 SSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDG 709
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K G+L A +LF M G PDS+ + C+ + E A+ + + KG
Sbjct: 710 YCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN-EKGCASS 768
Query: 357 FSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSG 391
+ +L+ + K ++I LM F K G
Sbjct: 769 SAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFG 804
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 138/327 (42%), Gaps = 14/327 (4%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDHAMQT 133
++ + Q + F ++L+E++ + PD F +S+++ +A +D A
Sbjct: 458 YTTLIKTFLQKSRFGDAVRVLKEMREQGIAPD-----TFCYNSLIIGLSKAKKMDEARSF 512
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM + G + A + G I + + + E + G+ PN +I +C
Sbjct: 513 LLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC-GVIPNKVLCTGLINEYC 571
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G S M + I +A + +L+ G K K D ++ M GIA V
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I KL ++A ++ D M+ G+ N+ Y L+ GF + G +E AK+L M
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 314 TNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ G P+ +YC + Y C+ G+ A ++ KG VP +LV G ++
Sbjct: 692 SGKGFPPNAVTYCTIIDGY--CKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLN 749
Query: 372 KVAEANELIGLMKKRFPKSGDMWNAAL 398
V A + +K S +NA +
Sbjct: 750 DVERAITIFETNEKGCASSSAPFNALI 776
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 144/354 (40%), Gaps = 53/354 (14%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDH 129
D +++ ++ L + N ++ E++ + PD+ F +++ + + +
Sbjct: 594 DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDV-----FSYGTLIDGFSKLGNMQK 648
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F+EM + GL +V N LL G S E+ K + E G PN+ TY +I
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSG-KGFPPNAVTYCTII 707
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGI 248
+C+SGD + + + EM+ K + P++ + L+ G + + E + + EK C
Sbjct: 708 DGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCAS 767
Query: 249 ASG---------------------VN----------------VYNIRIQSLCKLKRSEEA 271
+S +N YNI I LCK E A
Sbjct: 768 SSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAA 827
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
K L M + P + TY L++G+ K G +F + G EPD+ + +
Sbjct: 828 KELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINA 887
Query: 332 LCQGGEYETALKVCRASMAKGWVPH-----FSTMKSLVTGLASISKVAEANELI 380
+ G AL + AK V ST ++L++G A + ++ A +++
Sbjct: 888 FLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVV 941
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 92/239 (38%), Gaps = 35/239 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ ++YN +I C+ S+L EM + + + +L+ G K +
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M G + +Y+ I + K E+AKAL DGM++ G+ P Y LI G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394
Query: 297 FGKE-----------------------------------GNLEGAKKLFASMTNGGCEPD 321
F +E G+L+GA + M GC P+
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ Q + A++V + +G P SL+ GL+ K+ EA +
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFL 513
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 22/265 (8%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANM 126
P + + + + ++ QL +E+K + PD V++ ++ G + N
Sbjct: 697 PPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPD------SFVYTTLVDGCCRLND 750
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCI----LSKNYEEVKRIFTEFPKVYGIEPNS 182
++ A+ FE +K G S NAL+ + + R+ +G +PN
Sbjct: 751 VERAITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFG-KPND 808
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I C+ G+ + + M++ ++ P + LL G+ K + ++ V
Sbjct: 809 VTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDE 868
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-----GIKPNLDTYKHLIHGF 297
+ GI +Y++ I + K + +A LLD M ++ G K ++ T + L+ GF
Sbjct: 869 VIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGF 928
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDS 322
K G +E A+K+ +M PDS
Sbjct: 929 AKVGEMEVAEKVVENMVRLKYIPDS 953
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 49/308 (15%)
Query: 46 IARLKSESNPFRILDICCGASLA-PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR 104
+ K +S F LD+C S+ S + RM K A +++I + L E +
Sbjct: 92 VTEQKLDSFSFLALDLCNFGSIEKAHSVVIRMI----ERKWPVAEVWSSIVRCLREFVGK 147
Query: 105 PDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNAL-----LLGCI 157
D +R + I++ Y + +D A+ F L D + +L LL +
Sbjct: 148 SD----DRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDL----DLVPSLARCNHLLDAL 199
Query: 158 LSKN----YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE------ 207
L +N + +V + E V+ ++ +Y +I + C G+ +L +
Sbjct: 200 LKRNRLDLFWDVYKGMVERNVVFDVQ----SYEMLIGAHCRDGNVQLAKDVLLKTEEELG 255
Query: 208 ---------------MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
M K + P+ + LL+ G K+ + ED +L M G+ +
Sbjct: 256 TATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADN 315
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+I I L K + ++ A L+ M+S G + Y + I KEG +E AK LF
Sbjct: 316 VAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDG 375
Query: 313 MTNGGCEP 320
M G P
Sbjct: 376 MITFGVTP 383
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 1/292 (0%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
++Q L E+ ++ D ++ G+ +M+D A + +M G+R S+ N ++
Sbjct: 150 VTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMI 209
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
+E K I + + Y PN+ TY +I C + + +++ M +
Sbjct: 210 NILCKKGRVQEAKLIMSHIFR-YDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGC 268
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PN+ + L+ G E + E+ +L+ M + GI V Y I + SLC S EA
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M RG PN+ T+ LI G ++G E A L+ M G P + + LC
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G +ETA + + ++ G +P T ++ + + +A + M K
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 120/282 (42%), Gaps = 2/282 (0%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
R D N + I+ + + + +D A F+ M K G + + L+ G E
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E + E + GIEP TY + S C++G SS +L +M+++ PN F L
Sbjct: 290 EAMDMLEEMVQ-KGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
++G ++ K+E + M G+ YN I LC R E A + MLS G
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ TY +I F G+++ A +F M G P+ + Y C+ G A++
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI-GLMK 384
+ G P T L++G + K+ A L G+M+
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ + +M GL + NAL+ + +E IF ++ +G P+++TYN++I
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF-KWMLSHGSLPSTQTYNEII 419
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K FC GD I +M + PN + L+ G+ K+ + ++L++M+ G+
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I + + E A +L GM+ GI PN TY +I G+ ++ A L
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M G P S + + + A C + +G +P+ T S + GL
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599
Query: 370 ISKVAEANELIGLMKKR--FP 388
+ A ++ M+KR FP
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFP 620
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 2/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F+ M +G S N ++ L + ++ IF + K G PN TYN +I
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA-GSSPNVITYNTLI 454
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ G+ ++ +L M+ ++P+A + L++GF + K E + M + GI+
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I L + ++A AL M+ G P+ TY +I GF K ++ A+
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P+ + F LC+ G A K+ + + P+ T SL+ GL
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Query: 370 ISKVAEANELIGLMKK 385
+ AE E+ L+ +
Sbjct: 635 EGR-AEDAEMYNLLAR 649
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
Q N NA+ +LLE +K L+ + + I + + ++HA F M ++G+ +
Sbjct: 460 QGNLNNAM-RLLEIMKGN-GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSI 204
A++ G N +V F K+ G P+S+TYN +I F ++ S +
Sbjct: 518 VTYTAIIDGYF---NLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+M ++ + PN + + G + + K+ MEK + Y+ I LC+
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Query: 265 LKRSEEAKA--LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
R+E+A+ LL + G +PN+DTY L+ G EG A +L SM G +P
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ C+ + E+AL + + G+ H S K+L+ L + + EA +
Sbjct: 695 EIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQT 754
Query: 383 MKKRFPKSGD-MWNAAL 398
M ++ S + +W L
Sbjct: 755 MLEKHWNSDEVVWTVLL 771
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF----YKEHKYEDVGKVLQM- 242
+IKS G+ V L+E+ K DFG L F + K++ V M
Sbjct: 137 MIKSCRNEGEVKRVTQFLSEINSK------YDFGYTLCSFTTLLIQLGKFDMVDLARDMY 190
Query: 243 --MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M GI + +N I LCK R +EAK ++ + PN TY LI G +
Sbjct: 191 IKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRN 250
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
NL+ A +F M GC+P+S + LC G E A+ + + KG P T
Sbjct: 251 HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+ L +EA EL+G MKKR
Sbjct: 311 TIPLVSLCDAGCSSEAVELLGKMKKR 336
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 6/269 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N I A +M K GL +V + + G + +IF E K P
Sbjct: 562 FSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK-RNYFP 620
Query: 181 NSETYNKVIKSFCESG--DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
N TY+ +I C+ G + + +Y++LA + PN + L+ G E + + +
Sbjct: 621 NLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQ 680
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
++ M+K G+ +Y + CK + E A + M + G + +L YK LI
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC 740
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KE +E A+ +F +M D + + L + GE + LK+ ++ +F
Sbjct: 741 KENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQ 800
Query: 359 TMKSLVTGLASIS---KVAEANELIGLMK 384
T L L+++ K+ + ++ +G++K
Sbjct: 801 TYVMLARELSALDCAIKIPQISQQLGIVK 829
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 107/207 (51%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TYN ++ + C++ +L +M SI+P+ + ++ G+ ++++
Sbjct: 302 GVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEA 361
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ + M + G+ + +N + SLCK KRS+EA + + ++G KP++ +Y L+HG
Sbjct: 362 AKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHG 421
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ EG LF SMT+ G DS+CF + + G + AL + +G P+
Sbjct: 422 YATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPN 481
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
T +++ L + ++A+A E + M
Sbjct: 482 VVTYATVIAALCRMGRLADAMEKLSQM 508
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F + + GLR N L +K +E + G P++ +YN VIKS C
Sbjct: 188 FARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLC 247
Query: 194 ESGDSSSVYSILAEMRR-KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
S +L M + P+ + +++ G + E + + M + G+ V
Sbjct: 248 GGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNV 307
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN + +LCK + ++A+ +L M I+P+ TY +IHG+ G + A K+F
Sbjct: 308 VTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKE 367
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
MT G PD F LC+ + A ++ + KG P + L+ G A+ +
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGR 427
Query: 373 VAEANEL 379
+ N L
Sbjct: 428 FVDMNNL 434
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 124/308 (40%), Gaps = 50/308 (16%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDK--YGLRQSVD--------ALNALLLGCILSKNYEE 164
V ++V Y N I HA+ MDK LRQ D A++ G ++E
Sbjct: 304 VPNVVTY---NSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKE 360
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
++F E + G+ P+ T+N ++ S C+ S I + K +P+ + +LL
Sbjct: 361 AAKMFKEMTR-EGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS----------------------- 261
G+ E ++ D+ + M GI + + +NI I +
Sbjct: 420 HGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVS 479
Query: 262 ------------LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
LC++ R +A L M+S G+KPN Y LI GF G+L AK+L
Sbjct: 480 PNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKEL 539
Query: 310 FASMTNGGCEPDSYCFFM-FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ M + G + FF + LC G A V + G P T SL+ G
Sbjct: 540 VSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYC 599
Query: 369 SISKVAEA 376
+ K+ +A
Sbjct: 600 LVGKMDKA 607
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 114/279 (40%), Gaps = 40/279 (14%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+S+++++ RP++ +HS+ G+ + +A F + G R + N+L+
Sbjct: 540 VSEMMDQGIPRPNITFFSSI-IHSLCNEGR---VMNAQDVFNLVIHIGDRPDIFTFNSLI 595
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G L ++ + G EP+ TY+ +I + +SG + EM K +
Sbjct: 596 DGYCLVGKMDKAFGVLDAMVSA-GTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRV 654
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC---------- 263
+P + L+L G ++ + K+ M + G A ++ Y I +Q LC
Sbjct: 655 KPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAIT 714
Query: 264 -------------------------KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
K+KR EEA L + + G+ PN TY +I
Sbjct: 715 LFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLL 774
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
KEG++E A +F+SM GC P S L Q GE
Sbjct: 775 KEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGE 813
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 153/387 (39%), Gaps = 81/387 (20%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++SI + + F ++ L + + + F++ I + + M+D A+
Sbjct: 411 DIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNI-LINAHAKRGMMDEALLI 469
Query: 134 FEEMDKYGLRQSV----DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
F EM G+ +V + AL L+ E++ ++ + G++PN+ Y+ +I
Sbjct: 470 FTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS-----IGLKPNTVVYHSLI 524
Query: 190 KSFCESGDSSSVYSILAEMRRKSI-RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ FC GD +++EM + I RPN T F ++ E + + V ++ G
Sbjct: 525 QGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGD 584
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE---- 304
+ +N I C + + ++A +LD M+S G +P++ TY LI+G+ K G ++
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644
Query: 305 -------------------------------GAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
AKK+F M G + + LC
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704
Query: 334 QGG-----------------EYETAL---------KVCR--------ASM-AKGWVPHFS 358
+ ++E A+ KV R AS+ A G VP+ S
Sbjct: 705 RNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAS 764
Query: 359 TMKSLVTGLASISKVAEANELIGLMKK 385
T ++ L V EA+ + M+K
Sbjct: 765 TYGVMIINLLKEGSVEEADIMFSSMEK 791
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 4/215 (1%)
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF-YKEH 231
P+V + TY ++ C + + A + R +R + L Y +
Sbjct: 158 PRV--VPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKR 215
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPNLDTY 290
E + +L M + G YN I+SLC RS+EA +L M G P++ +Y
Sbjct: 216 TDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSY 275
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+IHG EG + A LF M G P+ + + LC+ + A V R
Sbjct: 276 TMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFD 335
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T +++ G + + + EA ++ M +
Sbjct: 336 NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTR 370
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 121/272 (44%), Gaps = 9/272 (3%)
Query: 104 RPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
RPD+ +++ ++ G + ++ A+ F E+ G+R V + L+ G S
Sbjct: 221 RPDIV------IYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQ 274
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
EE +F E + I P+ T+N ++ C+ G S I+ M K + PN +
Sbjct: 275 KEEASALFNEMMSL-NIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYN 333
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ G+ ++K + V M G V YNI I CK +R +EA+ L D M R
Sbjct: 334 SLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G+ PN Y LI G + G A++LF M GC PD + LC+ G + A
Sbjct: 394 GLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNA 453
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
L++ RA P+ T L+ + K+
Sbjct: 454 LRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 139/314 (44%), Gaps = 12/314 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER--FHVHSIV-LYGQANMIDHAMQTF 134
F +S L + H+ + L R +L + ER FH + ++ + + +D A
Sbjct: 87 FDKLLSALVRIKHYGTVL----SLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVL 142
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
++ K G ++L+ G + F E G +PN TYN +IK FC+
Sbjct: 143 GKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV-ASGYQPNLHTYNTIIKGFCK 201
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G ++ +L +M + RP+ + ++ G K+ + + ++ G+ V
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y+I + LC + EEA AL + M+S I P++ T+ L+ KEG L A+ + M
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321
Query: 315 NGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
G EP+ +Y M Y L Q +E + V A + KG +P+ + L+ G +
Sbjct: 322 EKGVEPNYATYNSLMNGYCL-QNKVFEARM-VFDAMITKGCMPNVVSYNILINGYCKAQR 379
Query: 373 VAEANELIGLMKKR 386
+ EA EL M R
Sbjct: 380 IDEARELFDEMSFR 393
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 143/316 (45%), Gaps = 12/316 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANM--ID 128
D + FS ++ L + F + +E+ +P+L H ++ ++ G +
Sbjct: 153 DAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNL------HTYNTIIKGFCKIGKTT 206
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ ++MDK G R + N ++ G + E IF+E K G+ P+ TY+ +
Sbjct: 207 VAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEI-KGKGVRPDVFTYSIL 265
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C S ++ EM +I P+ F +L+ KE + ++++M + G+
Sbjct: 266 MHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGV 325
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
YN + C + EA+ + D M+++G PN+ +Y LI+G+ K ++ A++
Sbjct: 326 EPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARE 385
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M+ G P+++ + LCQ G + A ++ + A+G P T L+ L
Sbjct: 386 LFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLC 445
Query: 369 SISKVAEANELIGLMK 384
+ + A L M+
Sbjct: 446 KLGYLDNALRLFRAMQ 461
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%)
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
M K P +F LL+ + Y V + + +E I V +NI I +L+
Sbjct: 74 HMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQ 133
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R + A ++L ++ G +P+ T+ LI+G E A + F M G +P+ + +
Sbjct: 134 RVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYN 193
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G+ A+ + + G P +++ GL V+EA ++ +K +
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGK 253
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM+ F EM G + V N L+ G +E R + P YG +P+ ++N
Sbjct: 232 VGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS-YGCQPDVISHN 290
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++S C G +LA M RK P+ F +L+ ++ VL+MM K
Sbjct: 291 MILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKH 350
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G +N IQ C K + A L+ M+SRG P++ TY L+ K+G ++ A
Sbjct: 351 GHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 410
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + +++ GC P + L + G+ E A+++ KG P T S+V G
Sbjct: 411 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 470
Query: 367 LASISKVAEANELIGLMKK 385
L+ KV EA + +K+
Sbjct: 471 LSREGKVREAMKFFHYLKR 489
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 4/258 (1%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+A Q +++ G V + N L+ G S EE R+ G+ PN+ TY+ V
Sbjct: 132 NASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM----GVSPNAATYDAV 187
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ S C+ G +L + P+ +L+ KE K+ M G
Sbjct: 188 LCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGC 247
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V YN+ I+ CK R +EA L + S G +P++ ++ ++ G A K
Sbjct: 248 KPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMK 307
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L A+M GC P F + FLCQ G AL V G P+ + L+ G
Sbjct: 308 LLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC 367
Query: 369 SISKVAEANELIGLMKKR 386
+ + A E + +M R
Sbjct: 368 NGKGIDRAIEYLEIMVSR 385
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 1/250 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM+ M + G SV N L+ + + PK +G PNS ++N +I
Sbjct: 305 AMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPK-HGHTPNSRSFNPLI 363
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ FC L M + P+ + +LL K+ K +D +L + G +
Sbjct: 364 QGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 423
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I L K+ ++E A LL+ M +G+KP+L T ++ G +EG + A K
Sbjct: 424 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKF 483
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F + P+++ + LC+ + A+ +AKG P +T +L+ G+
Sbjct: 484 FHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITY 543
Query: 370 ISKVAEANEL 379
+A++L
Sbjct: 544 EGLAEDASKL 553
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 96/234 (41%), Gaps = 2/234 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ F+I ++ L Q +LE + + F+ I + ID A++ E
Sbjct: 322 VTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFN-PLIQGFCNGKGIDRAIEYLE 380
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G + N LL ++ I ++ G P+ +YN VI +
Sbjct: 381 IMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS-KGCSPSLISYNTVIDGLLKV 439
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + +L EM K ++P+ ++ G +E K + K +++ I +Y
Sbjct: 440 GKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIY 499
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
N I LCK +++ A L M+++G KP TY LI G EG E A KL
Sbjct: 500 NSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 38/217 (17%)
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L M K P+ L+ F K + ++ +++ ++E+ G V YN+ I CK
Sbjct: 102 LEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCK 161
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKH-------------------------------- 292
EEA +LD M G+ PN TY
Sbjct: 162 SGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVT 218
Query: 293 ---LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
LI KE + A KLF M N GC+PD + + C+GG + A++ +
Sbjct: 219 CTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLP 278
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G P + ++ L S + +A +L+ M ++
Sbjct: 279 SYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRK 315
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++I ++ L + + +L +L ++ P L + ++ G+A + A
Sbjct: 390 DIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTV-IDGLLKVGKAEL---A 445
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ EEM GL+ + +++ G E + F + K + I PN+ YN +I
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFF-HYLKRFAIRPNAFIYNSIIT 504
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
C+S +S LA+M K +P + L+ G E ED K+
Sbjct: 505 GLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 26/330 (7%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMI 127
SP D ++ I + L++A N L ++L P +H + + AN
Sbjct: 320 SP-DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL-IHGLCM---ANSF 374
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALL-LGC---ILSKNYEEVKRIFTEFPKVYGIEPNSE 183
D A + F +M++ G S N ++ C +L + + +K++ + G P+
Sbjct: 375 DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIED-----GHVPDVV 429
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE--------- 234
TYN V+ C+S + EM R PN ++ G ++ K +
Sbjct: 430 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLD 489
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ ++L+ M G V Y+ I LC + R ++A+ LL+ M+ R KP + T LI
Sbjct: 490 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 549
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
HG K G ++ A+++ +M + G PD + + C+ G+ E A ++ +A+G
Sbjct: 550 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLA 609
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMK 384
P+ T +LV+GL +++ EA + MK
Sbjct: 610 PNVVTYTALVSGLCKANRLPEACGVFAQMK 639
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 133/317 (41%), Gaps = 11/317 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+A++ + L AN F+ +L ++ R ++V I + M++ A +
Sbjct: 359 VAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVM-IDASCKRGMLEEACDLIK 417
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M + G V N ++ G S EE +F E ++ G PN ++N +I C+
Sbjct: 418 KMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL-GCTPNRRSHNTIILGLCQQ 476
Query: 196 ---------GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
G + +L M P+ + L++G + +D +L+ M K
Sbjct: 477 SKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 536
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V N I LCK R +EA+ +LD M+S G P++ TY L+HG + G E A
Sbjct: 537 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 596
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++L + M G P+ + LC+ A V + G P+ T +L+ G
Sbjct: 597 RELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILG 656
Query: 367 LASISKVAEANELIGLM 383
S +V +L G M
Sbjct: 657 FCSAGQVDGGLKLFGEM 673
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 15/285 (5%)
Query: 111 ERFHVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNY 162
E HV +V Y +++ ++ A+ F EM++ G + + N ++LG C SK
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480
Query: 163 EEVKR-----IFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+ +R F ++ G P+ TY+ +I C +L +M ++ +P
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
L+ G K + ++ +VL M G + V YN + C+ ++E A+ LL
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M++RG+ PN+ TY L+ G K L A +FA M + GC P+ + + C
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 660
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
G+ + LK+ + G P +L L + A A E++
Sbjct: 661 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 137/324 (42%), Gaps = 21/324 (6%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAM 131
++I + L Q + + Q+ E++ R PD + I++ G +A ++ A
Sbjct: 290 GYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWS------YGILIDGLAKAGKLNDAR 343
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F+++ G+ S A +L+ G ++ ++++ + +F + + G P+ TYN +I +
Sbjct: 344 NLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR-RGCPPSPVTYNVMIDA 402
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G ++ +M P+ + ++ G K + E+ + ME+ G
Sbjct: 403 SCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPN 462
Query: 252 VNVYNIRIQSLCKLKRSE---------EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+N I LC+ + + EA LL M G P++ TY LI G
Sbjct: 463 RRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 522
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A+ L M C+P + LC+ G + A +V A ++ G P T +
Sbjct: 523 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 582
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
LV G + A EL+ M R
Sbjct: 583 LVHGHCRAGQTERARELLSDMVAR 606
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 11/282 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ + L +++ L E++ R N R H I+ Q + ID A Q
Sbjct: 427 DVVTYNTVMDGLCKSSRVEEALLLFNEME-RLGCTPNRRSHNTIILGLCQQSKIDQACQR 485
Query: 134 ---------FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ M G V + L+ G ++ + + + K +P T
Sbjct: 486 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK-RQCKPTVVT 544
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N +I C++G +L M P+ + L+ G + + E ++L M
Sbjct: 545 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV 604
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+A V Y + LCK R EA + M S G PNL TY LI GF G ++
Sbjct: 605 ARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVD 664
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
G KLF M G PD + LC+ G AL++ R
Sbjct: 665 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 706
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 144/383 (37%), Gaps = 75/383 (19%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR--PDLRQNERFHVHSIVLYG--------- 122
D F+ + L +A + +++E+++R P F H + L G
Sbjct: 78 DSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLL 137
Query: 123 -------------------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
+A +D A++ M + + + +L+++L+G + S +
Sbjct: 138 EIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRID 197
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E +++ E + EP T N +++ FC G +L M + P+ + +
Sbjct: 198 EALQVYRENRR----EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTV 253
Query: 224 LAGFYKEHKYED--------------------------------------VGKVLQMMEK 245
L G K + E+ + + +QM EK
Sbjct: 254 LDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEK 313
Query: 246 CG---IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
++ Y I I L K + +A+ L +L G+ P+ Y LIHG +
Sbjct: 314 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 373
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A++LFA M GC P + + C+ G E A + + + G VP T +
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433
Query: 363 LVTGLASISKVAEANELIGLMKK 385
++ GL S+V EA L M++
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMER 456
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 177 GIEPNSETYNKVIKSFCESG---DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
GI P + VI+ +C G ++ ++S++ E P + +L+ K +
Sbjct: 5 GIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHS----PYPDVYNVLIDSLSKRQET 60
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E V K++Q+M G + + LCK + +EA+ ++D M SR I P T L
Sbjct: 61 EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
H G++E A +L M +S + + LC+ + AL++ R +M++
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELAR-TMSEKR 175
Query: 354 VP-HFSTMKSLVTGLASISKVAEA 376
+P ++ S++ GL ++ EA
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEA 199
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI ++ IQ C + R+ EA + ++ P D Y LI K E
Sbjct: 5 GIFPAPLLFTSVIQGWCNVGRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAV 63
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KK+ M + GC PDS+ F LC+ G+ + A V ++ P+F+T L
Sbjct: 64 KKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHE 123
Query: 367 LASISKVAEANELIGLM 383
L + A +L+ +M
Sbjct: 124 LCLRGSMERAFQLLEIM 140
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 88/214 (41%), Gaps = 7/214 (3%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
+SP D + ++ V +A +LL ++ R L N + + +AN +
Sbjct: 573 QSP-DVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPE 630
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F +M G ++ AL+LG + + ++F E GI P+ Y +
Sbjct: 631 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEM-VCAGISPDHVVYGTLA 689
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATD---FGLLLAGFYKEHKYEDVGKVLQMMEKC 246
C+SG S+ IL E R+S+R A + + G + K E ++ M +
Sbjct: 690 AELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRG 748
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
G + LCK + EA+A+L+ ++
Sbjct: 749 GQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 782
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 1/208 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN T+ V+KSFC+ G Y + +M I P+ ++ +L+ G+ K+ + ++ ++
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M G+ + YN + + CK + +EA L M +G +P++ TY +I G K
Sbjct: 66 YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125
Query: 300 EGNL-EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
G + E + LF M GC ++ + LC+ E A K+ +KG+VP
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T ++++GL + KV+EA + M R
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSR 213
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 6/313 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQT 133
+A++ ++ L + + +LLEE+ ++ + N ++ +L G M + A Q
Sbjct: 150 VAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNT---ILSGLCRMGKVSEAKQF 206
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M G V A N LL +E ++F + G P++ TYN ++
Sbjct: 207 FDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI-AKGYMPDTVTYNSILLGLA 265
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +M PN + ++L+G + K +D KVL+ M K G V
Sbjct: 266 RKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVV 325
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + LCK ++A L M+ G P++ +Y +++G K + A+ LF M
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
PD F + LC+ G+ + A + G P + +L+ GL +
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRH 445
Query: 374 AEANELIGLMKKR 386
+A+ L MK++
Sbjct: 446 IQADRLTQAMKEK 458
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 128/284 (45%), Gaps = 8/284 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ +S L + + Q + + +R PD+ ++ LY + D A
Sbjct: 183 DNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVA---YNGLLDALYKEGK-TDEA 238
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M+ F+++ G N++LLG N +E + +F + G PN TY+ V+
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV-ASGCAPNGATYSIVLS 297
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + + +L EM + P+ + +LL G K + + ++ M G A
Sbjct: 298 GHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ Y++ + LCK + +A+ L D M+ R + P++ T+ L+ G K G L+ AK L
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
MT GC PD + L + G + A ++ +A KG++
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFL 461
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 2/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A + +EEM GL S+ N+LL +E +F + G EP
Sbjct: 53 YAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAE-KGFEP 111
Query: 181 NSETYNKVIKSFCESGDSSSVYSIL-AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
+ TY+ +I C++G + +L +M + N + L+ G K+ E K+
Sbjct: 112 DVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKL 171
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M G YN + LC++ + EAK D M SRG P++ Y L+ K
Sbjct: 172 LEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYK 231
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG + A KLF + G PD+ + L + + A ++ + +A G P+ +T
Sbjct: 232 EGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGAT 291
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+++G KV +A++++ M K
Sbjct: 292 YSIVLSGHCRAKKVDDAHKVLEEMSK 317
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 106/257 (41%), Gaps = 40/257 (15%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P+ YN +I + + G + EM + P+ + LL F KE K ++
Sbjct: 38 GISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEA 97
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA-KALLDGMLSRGIKPNLDTYKHLIH 295
++ + M + G V Y+ I LCK + EA + L M+ RG N Y LI+
Sbjct: 98 MELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALIN 157
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC---------------------- 333
G K+ N+E A KL M + G PD+ + LC
Sbjct: 158 GLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSP 217
Query: 334 -------------QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ G+ + A+K+ + +AKG++P T S++ GLA S + EA E+
Sbjct: 218 DVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 277
Query: 381 GLMKKRFPKSGDMWNAA 397
K+ SG N A
Sbjct: 278 ----KKMVASGCAPNGA 290
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
++NM D A + F++M G + + +L G +K ++ ++ E K+ G P+
Sbjct: 267 KSNM-DEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKI-GAVPDV 324
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++ C++ + + + M P+ + ++L G K +K D +
Sbjct: 325 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 384
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + + V +NI + LCK + +EAK LLD M G P+ Y L++G K+G
Sbjct: 385 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGR 444
Query: 303 LEGAKKLFASMTNGGCEPDSYCF 325
A +L +M G D CF
Sbjct: 445 HIQADRLTQAMKEKGFLSD--CF 465
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%)
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
R PN T++ ++ F K+G L KLF M + G PD + + + G +
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A ++ ++ G P T SL+ +K+ EA EL M ++
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK 107
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 37/301 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + A++ EEM+ GL ++ A +A++ C + E R E + G+ P
Sbjct: 228 YCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM-DCYCGMGWTEDARRILESLQRKGLSP 286
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGKV 239
N TY ++K +C+ G ++ EM+ I + +G+++ G+ + + +D +V
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M GI + VYN I LCKL R EE + +L M G++P+ +Y LI G+ +
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCR 406
Query: 300 EGNL-----------------------------------EGAKKLFASMTNGGCEPDSYC 324
EG++ + A +L+ M G P+
Sbjct: 407 EGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
L + G+ E AL + + ++A+G + T +++ GL I ++AEA EL+ MK
Sbjct: 467 CSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526
Query: 385 K 385
+
Sbjct: 527 E 527
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 141/333 (42%), Gaps = 34/333 (10%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ F+ ++ L + +LL+ EL+ PD R GQ H M
Sbjct: 500 ITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD-SLTYRTLFDGYCKLGQLGTATHLMN 558
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
E + G SV+ N+ + G ++K + +V I +E G+ PN TY +I +
Sbjct: 559 KMEHL---GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM-SARGLSPNLVTYGALIAGW 614
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ------MMEKC 246
C+ G+ ++ EM + PN L++ FYKE K ++ VLQ M+ C
Sbjct: 615 CKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGC 674
Query: 247 GIAS-------------------GVNV-YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
I++ NV +N+ I LCK R +AK+L + + ++ P+
Sbjct: 675 SISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD 734
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
TY LIHG G+++ A L M + G P+ + Y LC+ G+ A+ +
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+KG P+ T +L+ K EA +L
Sbjct: 795 KLQSKGISPNGITYNTLIDEYCKEGKTTEAFKL 827
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 141/330 (42%), Gaps = 5/330 (1%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
RIL+ L+P + + +++ V + ++++E+K D+ +E +
Sbjct: 274 RILESLQRKGLSP----NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
I Y Q +D A + EM G+ ++ N ++ G EEV+++ E V
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV- 388
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +YN +I +C G + + M R + + LL GF H +D
Sbjct: 389 GMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDA 448
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ +M K G+A + + L K ++E+A L L+RG+ N+ T+ +I+G
Sbjct: 449 LRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVING 508
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G + A++L M C PDS + C+ G+ TA + G+ P
Sbjct: 509 LCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
S +TG + + N++ M R
Sbjct: 569 VEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 2/217 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A++ + M K G+ + + + LL G + E+ ++ E G+ N T+N
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE-TLARGLAKNVITFN 503
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+ G + +L M+ P++ + L G+ K + ++ ME
Sbjct: 504 TVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL 563
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A V ++N I K+ + + M +RG+ PNL TY LI G+ KEGNL A
Sbjct: 564 GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 307 KKLFASMTNGGCEPDSY-CFFMFTYFLCQGGEYETAL 342
L+ M N G P+ + C + + F +G E L
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANL 660
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F KV G P+ + N+++ +SGD + +MR + P+ ++ +
Sbjct: 170 VFDGMGKV-GCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAY 228
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
++ + + ++ ME G+ + Y+ + C + +E+A+ +L+ + +G+ PN+
Sbjct: 229 CRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNV 288
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMT-NGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
TY L+ G+ K+G +E A+++ M G D + M CQ G + A +V
Sbjct: 289 VTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRN 348
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G + +++ GL + ++ E +++ M+
Sbjct: 349 EMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+++++G ++ I A FE + ++L+ GC S + +E + +
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL-RDVML 762
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ PN TYN +I C+SG S ++ +++ K I PN + L+ + KE K
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ K+ Q M + G EEA LLD M+ + PN TY LI
Sbjct: 823 EAFKLKQKMVEEGYM-------------------EEAIKLLDQMIENNVDPNYITYCTLI 863
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
HG+ K GN+E KL+ M G P ++
Sbjct: 864 HGYIKSGNMEEISKLYDEMHIRGLLPTNW 892
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 1/292 (0%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
++Q L E+ ++ D ++ G+ +M+D A + +M G+R S+ N ++
Sbjct: 150 VTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMI 209
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
+E K I + + Y PN+ TY +I C + + +++ M +
Sbjct: 210 NILCKKGRVQEAKLIMSHIFR-YDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGC 268
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PN+ + L+ G E + E+ +L+ M + GI V Y I + SLC S EA
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M RG PN+ T+ LI G ++G E A L+ M G P + + LC
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G +ETA + + ++ G +P T ++ + + +A + M K
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 120/282 (42%), Gaps = 2/282 (0%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
R D N + I+ + + + +D A F+ M K G + + L+ G E
Sbjct: 230 RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLE 289
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E + E + GIEP TY + S C++G SS +L +M+++ PN F L
Sbjct: 290 EAMDMLEEMVQ-KGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTAL 348
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
++G ++ K+E + M G+ YN I LC R E A + MLS G
Sbjct: 349 ISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ TY +I F G+++ A +F M G P+ + Y C+ G A++
Sbjct: 409 LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMR 468
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI-GLMK 384
+ G P T L++G + K+ A L G+M+
Sbjct: 469 LLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMME 510
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ + +M GL + NAL+ + +E IF ++ +G P+++TYN++I
Sbjct: 361 AIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF-KWMLSHGSLPSTQTYNEII 419
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K FC GD I +M + PN + L+ G+ K+ + ++L++M+ G+
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I + + E A +L GM+ GI PN TY +I G+ ++ A L
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M G P S + + + A C + +G +P+ T S + GL
Sbjct: 540 FWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCR 599
Query: 370 ISKVAEANELIGLMKKR--FP 388
+ A ++ M+KR FP
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFP 620
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 2/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F+ M +G S N ++ L + ++ IF + K G PN TYN +I
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA-GSSPNVITYNTLI 454
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ G+ ++ +L M+ ++P+A + L++GF + K E + M + GI+
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I L + ++A AL M+ G P+ TY +I GF K ++ A+
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P+ + F LC+ G A K+ + + P+ T SL+ GL
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Query: 370 ISKVAEANELIGLMKK 385
+ AE E+ L+ +
Sbjct: 635 EGR-AEDAEMYNLLAR 649
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
Q N NA+ +LLE +K L+ + + I + + ++HA F M ++G+ +
Sbjct: 460 QGNLNNAM-RLLEIMKGN-GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSI 204
A++ G N +V F K+ G P+S+TYN +I F ++ S +
Sbjct: 518 VTYTAIIDGYF---NLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+M ++ + PN + + G + + K+ MEK + Y+ I LC+
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQ 634
Query: 265 LKRSEEAKA--LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
R+E+A+ LL + G +PN+DTY L+ G EG A +L SM G +P
Sbjct: 635 EGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSE 694
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ C+ + E+AL + + G+ H S K+L+ L + + EA +
Sbjct: 695 EIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQT 754
Query: 383 MKKRFPKSGDM-WNAAL 398
M ++ S ++ W L
Sbjct: 755 MLEKHWNSDEVAWTVLL 771
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF----YKEHKYEDVGKVLQM- 242
+IKS G+ V L+E+ K DFG L F + K++ V M
Sbjct: 137 MIKSCRNEGEVKRVTQFLSEINSKY------DFGYTLCSFTTLLIQLGKFDMVDLARDMY 190
Query: 243 --MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M GI + +N I LCK R +EAK ++ + PN TY LI G +
Sbjct: 191 IKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRN 250
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
NL+ A +F M GC+P+S + LC G E A+ + + KG P T
Sbjct: 251 HNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTY 310
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+ L +EA EL+G MKKR
Sbjct: 311 TIPLVSLCDAGCSSEAVELLGKMKKR 336
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 117/269 (43%), Gaps = 6/269 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N I A +M K GL +V + + G + +IF E K P
Sbjct: 562 FSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEK-RNYFP 620
Query: 181 NSETYNKVIKSFCESG--DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
N TY+ +I C+ G + + +Y++LA + PN + L+ G E + + +
Sbjct: 621 NLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQ 680
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
++ M+K G+ +Y + CK + E A + M + G + +L YK LI
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALC 740
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KE +E A+ +F +M D + + L + GE + LK+ ++ +F
Sbjct: 741 KENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQ 800
Query: 359 TMKSLVTGLASIS---KVAEANELIGLMK 384
T L L+++ K+ + ++ +G++K
Sbjct: 801 TYVMLARELSALDCAIKIPQISQQLGIVK 829
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 156/371 (42%), Gaps = 46/371 (12%)
Query: 45 TIARLKSESNPFRILDICCGASLAPESPLDRMA--FSIAVSKLSQANHFNAISQLLEELK 102
+ RLK++ N +L +++A + A + + + +L + + + +L+++K
Sbjct: 44 VLKRLKTDRNLSSVLGF--FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
+ E + I Y + + A++ F + ++G + +V N LL + +
Sbjct: 102 MD-GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKF 160
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+ + ++T K G+ PN TYN ++K+ C++ + + + EM K P+A +
Sbjct: 161 QMINPLYTNMKK-DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+++ K K +D ++ + V VYN I +CK R E A LL M+ G
Sbjct: 220 MVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFAS------------------------------ 312
+ PN+ +Y +I+ GN+E A LFA
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334
Query: 313 -----MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
M GCEP+ + + LC G E AL+VC G +P+ +T L+ G
Sbjct: 335 DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394
Query: 368 ASISKVAEANE 378
A + A+E
Sbjct: 395 AKSGDLVGASE 405
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+ SV NAL+ G E ++ E G++PN +Y+ +I S C SG+
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMD-NGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+++ A+M + N F L+ G + K + + ++M + G V YN I
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LC EEA + D M G PN+ TY LI GF K G+L GA + + M + GC P+
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ LC+ ++ A + +G P+ T + + GL +V A +L+
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLE 478
Query: 382 LMK 384
M+
Sbjct: 479 RMQ 481
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 2/251 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+Q ++M + G +V + L+ G S + + +G PN TY
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS-HGCRPNVVTYT 423
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++ S++ +M + PN F + G + E K+L+ M+
Sbjct: 424 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGH 483
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN + +L ++ + EEA L + +R ++PNL TY +++GF + G + A
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC-RASMAKGWVPHFSTMKSLVT 365
+LF G PDS + + C+ G+ + A ++ R S K W P T SL+
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 603
Query: 366 GLASISKVAEA 376
G + + EA
Sbjct: 604 GACNWMNIEEA 614
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 6/278 (2%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
++S+ + G ++ A F +M G ++ L+ GC + E ++ +
Sbjct: 286 INSLCVSGN---VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G EPN YN +I C +G + +M+R PN T + +L+ GF K
Sbjct: 343 -DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLV 401
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ M G V Y + LCK ++A +L++ M G PN T+ I
Sbjct: 402 GASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFI 461
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G G +E A KL M GC P+ + L + +YE A + + A+
Sbjct: 462 KGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521
Query: 355 PHFSTMKSLVTGLASISKVAEANELIG--LMKKRFPKS 390
P+ T +++ G + + EA +L G L++ P S
Sbjct: 522 PNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDS 559
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 8/254 (3%)
Query: 116 HSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTE 171
+SI++ G A D A +T+ M +G R +V ++ +L KN +++ + E
Sbjct: 387 YSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD--VLCKNSMFDQANSL-VE 443
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ G PN+ T+N IK C +G +L M+ PN T + LL ++ +
Sbjct: 444 KMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
KYE+ + Q +E + + YN + + EA L L RG P+ TY
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYN 563
Query: 292 HLIHGFGKEGNLEGAKKLFASMTN-GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+IH + K+G ++ A +L +++ PD + + C E A+ ++
Sbjct: 564 TMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623
Query: 351 KGWVPHFSTMKSLV 364
+G P+F+T +LV
Sbjct: 624 QGICPNFATWNALV 637
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 9/246 (3%)
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+K L Q D L L +N V F+ + + TY +I+ +
Sbjct: 34 NKQQLLQESDVLKRLKT----DRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECE 89
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
V IL +M+ I F ++ G+ + E K+ + + G V +YN
Sbjct: 90 MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ +L + + L M G+ PN+ TY L+ K ++ A KLF M+N G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
C PD+ + LC+ G+ + A +A + P +L+ G+ ++ A
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDA-----RELAGRFKPSVPVYNALIDGMCKEGRIEVAI 264
Query: 378 ELIGLM 383
+L+G M
Sbjct: 265 KLLGEM 270
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 3/223 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ V L + + F+ + L+E++ F+ L G ++ AM+ E
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGR-VEWAMKLLE 478
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M +G ++ N LL YEE +F E + ++PN TYN V+ F +
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI-EARNLQPNLVTYNTVLYGFSRA 537
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNV 254
G + + + P++ + ++ + K+ K + ++++ + +
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIIT 597
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
Y I C EEA A LD +++GI PN T+ L+ F
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 152/332 (45%), Gaps = 15/332 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQA---NMI 127
D +A++ ++ +AN ++ Q+L+ +K + PD+ V +L G M+
Sbjct: 125 DLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDI-------VTYNILIGSLCSRGML 177
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A++ ++ K + +V L+ +L +E ++ E ++ ++P+ TYN
Sbjct: 178 DSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEI-NLQPDMFTYNS 236
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+ C G + I++ + K P+ + +LL G + K+E +++ M G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V Y++ I S+C+ + EE LL M +G+KP+ Y LI KEG ++ A
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++ M + GC PD + LC+ + AL + G P+ S+ S+ + L
Sbjct: 357 EVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL 416
Query: 368 ASIS-KVAEANELIGLMKKRFPKSGDMWNAAL 398
S KV ++ ++ K G +N+ +
Sbjct: 417 WSTGHKVRALGMILEMLDKGVDPDGITYNSLI 448
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 129/293 (44%), Gaps = 15/293 (5%)
Query: 100 ELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL 158
E+ +PD+ F +SI+ + +D A Q + G V N LL G +
Sbjct: 224 EINLQPDM-----FTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLN 278
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
+E + ++ G E N TY+ +I S C G +L +M++K ++P+
Sbjct: 279 QGKWEAGYELMSDM-VARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGY 337
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ L+A KE + + +VL +M G + YN + LCK KR++EA ++ + +
Sbjct: 338 CYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL 397
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
G PN +Y + G+ A + M + G +PD + LC+ G
Sbjct: 398 GEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMV 457
Query: 339 ETALKVC-----RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A+++ +S K P + ++ GL +S+V++A E++ M +
Sbjct: 458 DEAIELLVDMEMESSECK---PSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDK 507
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ YN +I FC + S Y +L M+ K P+ + +L+ + +
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALE 182
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ K V Y I I++ +EA LLD ML ++P++ TY +I G
Sbjct: 183 FKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMC 242
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+EG ++ A ++ +S+++ G PD + + L G++E ++ +A+G +
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T L++ + KV E L+ MKK+
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKK 330
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 108/242 (44%), Gaps = 4/242 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S+ +S + + LL+++K + L+ + + I + +D A++ +
Sbjct: 302 VTYSVLISSVCRDGKVEEGVGLLKDMKKK-GLKPDGYCYDPLIAALCKEGRVDLAIEVLD 360
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G + N +L K +E IF + +V G PN+ +YN + + +
Sbjct: 361 VMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEV-GCSPNASSYNSMFSALWST 419
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL--QMMEKCGIASGVN 253
G ++ EM K + P+ + L++ ++ ++ ++L ME V
Sbjct: 420 GHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVV 479
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + LCK+ R +A +L M+ +G +PN TY LI G G G L A+ L ++
Sbjct: 480 SYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539
Query: 314 TN 315
N
Sbjct: 540 VN 541
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CK E+ L ++++G KP++ LIHG ++ A ++ + N G PD
Sbjct: 68 CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ C+ ++A +V KG+ P T L+ L S
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCS 173
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN T+N +I C+S S + I ++ + + P+ F +L+AG K +E
Sbjct: 323 GCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQA 382
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + M + V + I LCK + E A+ +LD M + G+ PN+ TY L+HG
Sbjct: 383 SALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHG 442
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G +E + M + GC P+S + Y LC+ + AL++ + GW P
Sbjct: 443 LCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPD 502
Query: 357 FSTMKSLVTGLASISKVAEA----NELIG 381
T LV GL K +A E++G
Sbjct: 503 TVTYNILVDGLWKSGKTEQAITVLEEMVG 531
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 7/274 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--I 178
+ +A+ +D A++ M G +V N+++ G S E +I + VY +
Sbjct: 303 FCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQ---VYNRML 359
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ T+N +I C++G+ ++ EM K+++P+ FG L+ G K + E
Sbjct: 360 VPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARD 419
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L +M G+ V YN+ + LCK R EE L+ M+S G P TY L++
Sbjct: 420 ILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALC 479
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+ + A +L + + + G +PD+ + + L + G+ E A+ V + KG P
Sbjct: 480 RASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 539
Query: 359 TMKSLVTGLASISKVAEANEL--IGLMKKRFPKS 390
T + GL +A EL + L K P +
Sbjct: 540 TFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDA 573
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 163/411 (39%), Gaps = 70/411 (17%)
Query: 14 KTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPL 73
++V N+ SL AG+ A AL I R +AR +AP
Sbjct: 43 RSVADYNIVLQSLCRAGETARALEIF---RGEMAR----------------DGVAPTI-- 81
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRP-------------------DLRQNERFH 114
+ ++ ++ L ++N A +L EEL R DL + R H
Sbjct: 82 --VTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLH 139
Query: 115 --------VHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDAL------NALL 153
V ++V Y + ID A + +EM R+S D L N+ L
Sbjct: 140 GGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMT----RKSCDVLPNIITYNSFL 195
Query: 154 LG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
G C S E + + + + P++ T++ +I C+ G + + +M
Sbjct: 196 DGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGG 253
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
PN + L+ G K K E +++ M G+ V Y++ + + CK R +EA
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEAL 313
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
LL GM SRG PN+ T+ +I G K A ++ + N PD F +
Sbjct: 314 ELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGA 373
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
C+ G +E A + +AK P T +L+ GL +V A +++ LM
Sbjct: 374 CKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLM 424
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 3/251 (1%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
++M G +V NAL+ G + E + G+ P+ TY+ ++ +FC+
Sbjct: 247 DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVD-KGVTPDVITYSVLVDAFCK 305
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV-LQMMEKCGIASGVN 253
+ +L M + PN F ++ G K + + ++ LQ+ + + V
Sbjct: 306 ASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVT 365
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+NI I CK E+A AL + M+++ ++P++ T+ LI G K G +E A+ + M
Sbjct: 366 -FNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLM 424
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
N G P+ + + + LC+ G E + ++ G VP T SLV L S+
Sbjct: 425 GNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRT 484
Query: 374 AEANELIGLMK 384
+A +L+ +K
Sbjct: 485 DDALQLVSKLK 495
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 130/298 (43%), Gaps = 16/298 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-------LYGQANM 126
D + +S+ V +A+ + +LL + +R F+ SI+ G+A
Sbjct: 292 DVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN--SIIDGLCKSDRSGEAFQ 349
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+Q + M L N L+ G + N+E+ +F E ++P+ T+
Sbjct: 350 I--ALQVYNRM----LVPDKVTFNILIAGACKAGNFEQASALFEEM-VAKNMQPDVMTFG 402
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++G + IL M + PN + +L+ G K + E+ + L+ M
Sbjct: 403 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS 462
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y + +LC+ R+++A L+ + S G P+ TY L+ G K G E A
Sbjct: 463 GCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQA 522
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+ M G +PDS+ F L + G +++ R +AKG +P +T S++
Sbjct: 523 ITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI +QSLC+ + A + G ++R G+ P + TY +I+G K L +LF +
Sbjct: 48 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD + LC+ G+ E A ++ ++G VP+ T L+ GL + ++
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167
Query: 374 AEANELIGLMKKR 386
EA ELI M ++
Sbjct: 168 DEARELIQEMTRK 180
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 1/262 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N + A+ +M K G++ N L+ G + +E +F E + G +P+ +
Sbjct: 141 NHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR-RGHQPDVIS 199
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ VI C+SG++S +L +M K +PN + ++ K+ D +L M
Sbjct: 200 YSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMV 259
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI V Y+ + C L EA L + M+ R + PN T+ L+ G KEG +
Sbjct: 260 DRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVS 319
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A+ +F +MT G EP++Y + C + + A KV + KG P + L+
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379
Query: 365 TGLASISKVAEANELIGLMKKR 386
G ++ EA L+ M ++
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEK 401
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 138/309 (44%), Gaps = 8/309 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLL---EELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D +++S ++ L ++ + + QLL EE +P+L + I + +++ A
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVA----YTTIIDSLCKDTLVNDA 251
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M EM G+ V + +L G + E +F E + PN+ T+ ++
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVG-RNVMPNTVTFTILVD 310
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ G S + M +K PNA + L+ G+ ++ ++ KVL +M G A
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V+ YNI I CK +R +EAK+LL M + + P+ TY L+ G + G + A LF
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G PD + LC+ G + ALK+ ++ P L+ G+
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA 490
Query: 371 SKVAEANEL 379
K+ A EL
Sbjct: 491 GKLEVAKEL 499
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+Q +M++ G + ++ A ++ + + +E GI P+ TY+ ++
Sbjct: 216 ALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVD-RGIPPDVVTYSTIL 274
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G + + EM +++ PN F +L+ G KE + V + M K G
Sbjct: 275 HGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAE 334
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + C + +EA+ +LD M+ +G P + +Y LI+G+ K L+ AK L
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSL 394
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M+ PD+ + LCQ G + AL + + + G +P T +L+ GL
Sbjct: 395 LVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCK 454
Query: 370 ISKVAEANELIGLMKK 385
+ EA +L+ M++
Sbjct: 455 HGHLDEALKLLKSMQE 470
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 12/309 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--IDHA 130
+A++ + L + N LL E+ R PD+ +S +L+G ++ ++ A
Sbjct: 233 VAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV------TYSTILHGFCSLGHLNEA 286
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F EM + + L+ G E + +F K G EPN+ TYN ++
Sbjct: 287 TILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTK-KGAEPNAYTYNALMD 345
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C + +L M K P + +L+ G+ K + ++ +L M + +
Sbjct: 346 GYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTP 405
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y+ +Q LC++ R +EA L M S G+ P+L TY L+ G K G+L+ A KL
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
SM EPD + + + G+ E A ++ A G P T ++ GL
Sbjct: 466 KSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKE 525
Query: 371 SKVAEANEL 379
EA EL
Sbjct: 526 GLSDEAYEL 534
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 140/330 (42%), Gaps = 7/330 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDH 129
P D + +S + H N + L E+ R + F +I++ G + M+
Sbjct: 264 PPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF---TILVDGLCKEGMVSE 320
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A FE M K G + NAL+ G L+ +E +++ + G P +YN +I
Sbjct: 321 ARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL-DIMVDKGCAPVVHSYNILI 379
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ S+L EM K + P+ + L+ G + + ++ + + M G+
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+ + LCK +EA LL M I+P++ Y LI G G LE AK+L
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F+ + G +P + + L + G + A ++ R G++P+ + ++ G
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559
Query: 370 ISKVAEANELIG-LMKKRFPKSGDMWNAAL 398
+ A LI ++ KRF + L
Sbjct: 560 NQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 195 SGDSSSVYSILAE---MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
S +S S+ LA M R + RP+ +FG L K+ +Y V + M+ G+
Sbjct: 67 SNNSISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHN 126
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V NI I LC+L A ++L M GI+P+ T+ LI+G EG ++ A LF
Sbjct: 127 VYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFN 186
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M G +PD + LC+ G AL++ R KG P+ +++ L +
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDT 246
Query: 372 KVAEANELIGLMKKR 386
V +A +L+ M R
Sbjct: 247 LVNDAMDLLSEMVDR 261
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 106/260 (40%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ +F M + R SV L K Y V + + ++G+ N + N
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQM-DLFGVTHNVYSLN 131
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C S+L +M + I+P+A F L+ G E + ++ + M +
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V Y+ I LCK + A LL M +G KPNL Y +I K+ + A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L + M + G PD + + C G A + + + +P+ T LV G
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311
Query: 367 LASISKVAEANELIGLMKKR 386
L V+EA + M K+
Sbjct: 312 LCKEGMVSEARCVFEAMTKK 331
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 99/197 (50%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G I EM+ + + PN + L+ GF K E+ ++ M G
Sbjct: 68 IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG 127
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + +N+ I LCK + EAK LL+ + RGI +L TY LI GF K G+L A+
Sbjct: 128 VQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSAR 187
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KLF SM + GCE + + + C+ + E A+ + G P+ T +L+TGL
Sbjct: 188 KLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGL 247
Query: 368 ASISKVAEANELIGLMK 384
KV +AN+L G+MK
Sbjct: 248 LQTGKVGDANKLFGVMK 264
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 110/252 (43%), Gaps = 1/252 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + FEEM G+ +V + ++L+ G + EE KR+F E G++PN +N
Sbjct: 79 DEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVD-QGVQPNLVQFNV 137
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G +L ++ I + + L+ GF K K+ M G
Sbjct: 138 LIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKG 197
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
Y I I CK+ + EEA L + M G +PN+ TY L+ G + G + A
Sbjct: 198 CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDAN 257
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KLF M G DS + +F LC+ G A+++ + + F + L+ GL
Sbjct: 258 KLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGL 317
Query: 368 ASISKVAEANEL 379
KV A E
Sbjct: 318 CKAGKVEIAWEF 329
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 18/203 (8%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ T N + C S + + + R+ P+ + L+ G + H+
Sbjct: 5 GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRIS-- 62
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ C I G LCK+ +EAK + + M ++G+ PN+ +Y L+HG
Sbjct: 63 ------VATCIIIDG----------LCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHG 106
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F G LE +K+LF M + G +P+ F + LC+ G+ A K+ ++ +G +
Sbjct: 107 FCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILD 166
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T SL+ G I ++ A +L
Sbjct: 167 LVTYNSLIDGFCKIGDLSSARKL 189
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 146/355 (41%), Gaps = 52/355 (14%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+A I + L + H + ++ EE+K + P++ VH G+ ++ + +
Sbjct: 63 VATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSL-VHGFCCAGK---LEESKR 118
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYE--EVKRIFTEFPKVYGIEPNSETYNKVIK 190
F EM G++ ++ N L+ IL K + E K++ E GI + TYN +I
Sbjct: 119 LFNEMVDQGVQPNLVQFNVLID--ILCKEGKVIEAKKLL-EVTIQRGIILDLVTYNSLID 175
Query: 191 SFCESGDSSSV------------------YSILA-----------------EMRRKSIRP 215
FC+ GD SS Y+IL EM + RP
Sbjct: 176 GFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRP 235
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N + LL G + K D K+ +M+ GI+ +Y I + LCK EA L
Sbjct: 236 NVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELF 295
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
+ + S K + ++Y LI G K G +E A + F ++ G +P+ + + C+
Sbjct: 296 NELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRV 355
Query: 336 GEYETALKVCRASMAK----GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + A + M K G P T +L+ G +K+ E L+ M KR
Sbjct: 356 EQVDKA-NILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + I A++ M + G++ ++ + ++ G + K++ +F + K G
Sbjct: 492 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK-EG 550
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I +FC G+ + EM++ RP F ++ GF K
Sbjct: 551 MKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSL 610
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V MM +CG V+ +N I L + ++ E+A +LD M G+ N TY ++ G+
Sbjct: 611 EVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 670
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A + F + N G E D + + C+ G ++AL V + A+ +P
Sbjct: 671 ASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARN-IPRN 729
Query: 358 STMKS-LVTGLASISKVAEANELIGLMKK 385
S + + L+ G A V EA +LI MKK
Sbjct: 730 SFVYNILIDGWARRGDVWEAADLIQQMKK 758
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 147/383 (38%), Gaps = 49/383 (12%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
+LK +N F + + + P+ L +I + N AI + E K R
Sbjct: 531 VKLKDWANAFAVFEDMVKEGMKPDVILYN---NIIAAFCGMGNMDRAIQTVKEMQKLRH- 586
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
R R + I + ++ + +++ F+ M + G +V NAL+ G + + E+
Sbjct: 587 -RPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAV 645
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSF---------------------------------- 192
I E + G+ N TY K+++ +
Sbjct: 646 EILDEM-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKA 704
Query: 193 -CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+SG S ++ EM ++I N+ + +L+ G+ + + ++Q M+K G+
Sbjct: 705 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 764
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
++ Y I + K A ++ M + G+KPN+ TY LI G+ + E A +
Sbjct: 765 IHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYE 824
Query: 312 SMTNGGCEPDSYCFF-MFTYFLCQGG-----EYETALKVCRASMAKGWVPHFSTMKSLVT 365
M G +PD + + T L + Y + +C+ + G + T
Sbjct: 825 EMKAVGLKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSR 884
Query: 366 GLASISKVAEANELIGLMKKRFP 388
L I EL ++K FP
Sbjct: 885 CLCKIE--GSGGELTETLQKTFP 905
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 127/303 (41%), Gaps = 2/303 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S+ V S+A + A +E K R N + I + Q ++ A
Sbjct: 381 VTYSVIVGGFSKAGNAEAADHWFDEAK-RIHKTLNASIYGKIIYAHCQTCNMERAEALVR 439
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ + + ++ G + + ++ +F K G P TY +I + +
Sbjct: 440 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRL-KECGFTPTVVTYGCLINLYTKV 498
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + M+ + ++ N + +++ GF K + + V + M K G+ V +Y
Sbjct: 499 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 558
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I + C + + A + M +P T+ +I+GF K G++ + ++F M
Sbjct: 559 NNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRR 618
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + F L + + E A+++ G + T ++ G AS+ +
Sbjct: 619 CGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 678
Query: 376 ANE 378
A E
Sbjct: 679 AFE 681
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 47/327 (14%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDK 139
V K+S+A +S++++E + +L+ +S+++ G + D +A FE+M K
Sbjct: 498 VGKISKALE---VSRVMKEEGVKHNLK------TYSMMINGFVKLKDWANAFAVFEDMVK 548
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G++ V N ++ N + + E K+ P + T+ +I F +SGD
Sbjct: 549 EGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPIINGFAKSGDMR 607
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN--- 256
+ MRR P F L+ G ++ + E ++L M G+++ + Y
Sbjct: 608 RSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 667
Query: 257 ----------------IRIQ----------------SLCKLKRSEEAKALLDGMLSRGIK 284
R+Q + CK R + A A+ M +R I
Sbjct: 668 QGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP 727
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
N Y LI G+ + G++ A L M G +PD + + F + G+ A +
Sbjct: 728 RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 787
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASIS 371
A G P+ T +L+ G A S
Sbjct: 788 IEEMEALGVKPNIKTYTTLIKGWARAS 814
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 124/311 (39%), Gaps = 2/311 (0%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R F + V + + + E ++ R + R + I Y ++ A+
Sbjct: 310 RTEFGLMVKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMEEALSCV 368
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + G+ S+ + ++ G + N E F E +++ N+ Y K+I + C+
Sbjct: 369 RKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKT-LNASIYGKIIYAHCQ 427
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + +++ EM + I + ++ G+ + V + +++CG V
Sbjct: 428 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVT 487
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I K+ + +A + M G+K NL TY +I+GF K + A +F M
Sbjct: 488 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 547
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +PD + C G + A++ + P T ++ G A +
Sbjct: 548 KEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMR 607
Query: 375 EANELIGLMKK 385
+ E+ +M++
Sbjct: 608 RSLEVFDMMRR 618
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 6/179 (3%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+P+ T+FGL++ + + + + M GI +Y I + + EEA +
Sbjct: 307 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALS 366
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+ M GI+ +L TY ++ GF K GN E A F ++ + Y C
Sbjct: 367 CVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC 426
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK-KRFPKSG 391
Q E A + R +G + +++ G + A+E GL+ KR + G
Sbjct: 427 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV-----ADEKKGLIVFKRLKECG 480
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 156/371 (42%), Gaps = 46/371 (12%)
Query: 45 TIARLKSESNPFRILDICCGASLAPESPLDRMA--FSIAVSKLSQANHFNAISQLLEELK 102
+ RLK++ N +L +++A + A + + + +L + + + +L+++K
Sbjct: 44 VLKRLKTDRNLSSVLGF--FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMK 101
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
+ E + I Y + + A++ F + ++G + +V N LL + +
Sbjct: 102 MD-GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKF 160
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+ + ++T K G+ PN TYN ++K+ C++ + + + EM K P+A +
Sbjct: 161 QMINPLYTNMKK-DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+++ K K +D ++ + V VYN I +CK R E A LL M+ G
Sbjct: 220 MVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFAS------------------------------ 312
+ PN+ +Y +I+ GN+E A LFA
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334
Query: 313 -----MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
M GCEP+ + + LC G E AL+VC G +P+ +T L+ G
Sbjct: 335 DLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGF 394
Query: 368 ASISKVAEANE 378
A + A+E
Sbjct: 395 AKSGDLVGASE 405
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+ SV NAL+ G E ++ E G++PN +Y+ +I S C SG+
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMD-NGVDPNVVSYSCIINSLCVSGNVELA 298
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+++ A+M + N F L+ G + K + + ++M + G V YN I
Sbjct: 299 FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHG 358
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LC EEA + D M G PN+ TY LI GF K G+L GA + + M + GC P+
Sbjct: 359 LCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPN 418
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ LC+ ++ A + +G P+ T + + GL +V A +L+
Sbjct: 419 VVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLE 478
Query: 382 LMK 384
M+
Sbjct: 479 RMQ 481
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 2/251 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+Q ++M + G +V + L+ G S + + +G PN TY
Sbjct: 365 LEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS-HGCRPNVVTYT 423
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++ S++ +M + PN F + G + E K+L+ M+
Sbjct: 424 CMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGH 483
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN + +L ++ + EEA L + +R ++PNL TY +++GF + G + A
Sbjct: 484 GCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEA 543
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC-RASMAKGWVPHFSTMKSLVT 365
+LF G PDS + + C+ G+ + A ++ R S K W P T SL+
Sbjct: 544 LQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIW 603
Query: 366 GLASISKVAEA 376
G + + EA
Sbjct: 604 GACNWMNIEEA 614
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 6/278 (2%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
++S+ + G ++ A F +M G ++ L+ GC + E ++ +
Sbjct: 286 INSLCVSGN---VELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G EPN YN +I C +G + +M+R PN T + +L+ GF K
Sbjct: 343 -DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLV 401
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ M G V Y + LCK ++A +L++ M G PN T+ I
Sbjct: 402 GASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFI 461
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G G +E A KL M GC P+ + L + +YE A + + A+
Sbjct: 462 KGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQ 521
Query: 355 PHFSTMKSLVTGLASISKVAEANELIG--LMKKRFPKS 390
P+ T +++ G + + EA +L G L++ P S
Sbjct: 522 PNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDS 559
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 114/254 (44%), Gaps = 8/254 (3%)
Query: 116 HSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTE 171
+SI++ G A D A +T+ M +G R +V ++ +L KN +++ + E
Sbjct: 387 YSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVD--VLCKNSMFDQANSL-VE 443
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ G PN+ T+N IK C +G +L M+ PN T + LL ++ +
Sbjct: 444 KMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMN 503
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
KYE+ + Q +E + + YN + + EA L L RG P+ TY
Sbjct: 504 KYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYN 563
Query: 292 HLIHGFGKEGNLEGAKKLFASMTN-GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+IH + K+G ++ A +L +++ PD + + C E A+ ++
Sbjct: 564 TMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAIN 623
Query: 351 KGWVPHFSTMKSLV 364
+G P+F+T +LV
Sbjct: 624 QGICPNFATWNALV 637
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 99/246 (40%), Gaps = 9/246 (3%)
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+K L Q D L L +N V F+ + + TY +I+ +
Sbjct: 34 NKQQLLQESDVLKRLKT----DRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECE 89
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
V IL +M+ I F ++ G+ + E K+ + + G V +YN
Sbjct: 90 MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ +L + + L M G+ PN+ TY L+ K ++ A KLF M+N G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
C PD+ + LC+ G+ + A +A + P +L+ G+ ++ A
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDA-----RELAGRFKPSVPVYNALIDGMCKEGRIEVAI 264
Query: 378 ELIGLM 383
+L+G M
Sbjct: 265 KLLGEM 270
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 3/223 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ V L + + F+ + L+E++ F+ L G ++ AM+ E
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGR-VEWAMKLLE 478
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M +G ++ N LL YEE +F E + ++PN TYN V+ F +
Sbjct: 479 RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI-EARNLQPNLVTYNTVLYGFSRA 537
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNV 254
G + + + P++ + ++ + K+ K + ++++ + +
Sbjct: 538 GMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIIT 597
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
Y I C EEA A LD +++GI PN T+ L+ F
Sbjct: 598 YTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 120/284 (42%), Gaps = 36/284 (12%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM ++G S A++ L+ G N + + K +G+ P+ YN +I S
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKK-FGVAPSLFVYNALINS 364
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G S+ M K + PN + +L+ F K K + L M + GI +
Sbjct: 365 MCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKAT 424
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y+ I CKL + AK+L D M++ G+KPN+ Y LI G+ KEG L A +L+
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQG-----------------------------------G 336
MT G P++Y F LC G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
A ++ + KG VP T + L++GL S +V+EA E +
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 145/331 (43%), Gaps = 19/331 (5%)
Query: 54 NPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERF 113
N FR+ G ++P + F+ +S L AN ++L E+ ++ NE
Sbjct: 478 NAFRLYHEMTGKGISPNT----YTFTALISGLCHANRMAEANKLFGEM-VEWNVIPNEV- 531
Query: 114 HVHSIVLYG---QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+++++ G + N + A + +EM + GL L+ G + E +
Sbjct: 532 -TYNVLIEGHCKEGNTV-RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589
Query: 171 EFP-------KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+ ++ G PN TY +I C+ G + EM + PN +
Sbjct: 590 DLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACF 649
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L E E ++ ++ + +A+ V YNI I+ CKL R +EA +L M+ GI
Sbjct: 650 LDYLTSEGNIEKAIQLHDVLLEGFLANTV-TYNILIRGFCKLGRIQEAAEVLVNMIDSGI 708
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ +Y +I+ + + G+L+ A KL+ SM N G PD+ + Y C GE A +
Sbjct: 709 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 768
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
+ M +G P+ +T SL+ G +S V+
Sbjct: 769 LRDDMMRRGVKPNRATYNSLIHGTCLMSSVS 799
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 126/278 (45%), Gaps = 11/278 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D A+ +M + G++ +V ++L+ G C L K K +F E G++PN Y
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGK-LRAAKSLFDEMI-ANGLKPNVVIY 463
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I +C+ G+ + + + EM K I PN F L++G ++ + K+ M +
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+ YN+ I+ CK + A LLD M+ +G+ P+ TY+ LI G G +
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 306 AKKLFASMTNG--------GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
A++ + GC P+ + LC+ G + A +CR +A +P+
Sbjct: 584 AREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 643
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+T + L S + +A +L ++ + F + +N
Sbjct: 644 NTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYN 681
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 141/351 (40%), Gaps = 44/351 (12%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+S +S + A L +E+ L+ N + I Y + + +A + + EM
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIAN-GLKPNVVIYTSLISGYCKEGELHNAFRLYHEM 486
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
G+ + AL+ G + E ++F E + + + PN TYN +I+ C+ G+
Sbjct: 487 TGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE-WNVIPNEVTYNVLIEGHCKEGN 545
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV--------GKVLQMMEKCGIA 249
+ + +L EM K + P+ + L++G + + G+ ++ E G
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCL 605
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN-------LD-------------- 288
V Y I LCK+ ++A+ L ML+ PN LD
Sbjct: 606 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 665
Query: 289 -------------TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
TY LI GF K G ++ A ++ +M + G PD + Y C+
Sbjct: 666 HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 725
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ + A+K+ + + +G P L+ G ++ +A EL M +R
Sbjct: 726 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRR 776
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 143/350 (40%), Gaps = 53/350 (15%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMID--HAM 131
S ++ L + F L +E+ + RPD+ +V++ V+ + D A
Sbjct: 182 TLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDV------YVYTAVVRSLCELKDFIRAR 235
Query: 132 QTFEEMDKYGLRQSVDALNALLLG-CILSKNYE--EVKRIFTEFPKVYGIEPNSETYNKV 188
+ M+ G SV N + G C + +E E+K + + G+ + TY +
Sbjct: 236 EVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLS----YKGLRADVGTYCTL 291
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+ + + ++ EM P+ L+ G K+ ++ ++K G+
Sbjct: 292 VLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGV 351
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE---- 304
A + VYN I S+CK + +EA++L + M +G+ PN TY LI F K G L+
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Query: 305 -------------------------------GAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
AK LF M G +P+ + C
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ GE A ++ KG P+ T +L++GL +++AEAN+L G M
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEM 521
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 100/245 (40%), Gaps = 1/245 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G+ + L+ +L G I + + +F E G+ P+ Y V++S CE D
Sbjct: 175 GILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSS-GLRPDVYVYTAVVRSLCELKDFIR 233
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ M + + + + G K + + ++ ++ G+ + V Y +
Sbjct: 234 AREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVL 293
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK++ E + +++ M+ G P+ +L+ G K+GN+ A L + G P
Sbjct: 294 GLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAP 353
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + +C+ G+ + A + KG P+ T L+ K+ A +
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413
Query: 381 GLMKK 385
G M +
Sbjct: 414 GKMTE 418
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 86/201 (42%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
++ +I+++ ++ ++ M I P +L G + ++ + +
Sbjct: 148 FDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIV 207
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ V VY ++SLC+LK A+ ++ M S G ++ TY I G K +
Sbjct: 208 SSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVW 267
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A ++ ++ G D + LC+ E+E ++ + G+VP + + +LV
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327
Query: 365 TGLASISKVAEANELIGLMKK 385
GL + A +L+ +KK
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKK 348
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 133/311 (42%), Gaps = 8/311 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ F + KL +A F +E L +P++ +H Y I+ A + +
Sbjct: 180 IVFDLLEGKLKKAREFIG---FMEGLGFKPNVVSYNTI-IHG---YSSRGNIEGARRILD 232
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G+ +L+ G EE +F + ++ G+ PN+ TYN +I +C
Sbjct: 233 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI-GLVPNAVTYNTLIDGYCNK 291
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
GD +S EM +K I P+ + + LL+ + E + + +++ M K GI Y
Sbjct: 292 GDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITY 351
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
NI I + ++ A L + MLS+GI+P TY LI+ + ++ A LF + +
Sbjct: 352 NILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILD 411
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G PD F C G E A + + K P T +L+ G KV E
Sbjct: 412 QGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEE 471
Query: 376 ANELIGLMKKR 386
A L+ MK R
Sbjct: 472 ARMLLDEMKXR 482
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 36/286 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A +EM K G+ SV N L+ + E + E K GI P++ TYN
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK-KGIIPDAITYN 352
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + G++ + + EM K I P + L+ + ++ ++ + + +
Sbjct: 353 ILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 412
Query: 247 GIASGVNVYNIRI-----------------------------------QSLCKLKRSEEA 271
G++ V ++N I Q C+ + EEA
Sbjct: 413 GVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ LLD M RGIKP+ +Y LI G+G+ G+++ A + M + G P +
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
LC+ E + A ++ + + KG P ST SL+ G+ ++ + E N
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 578
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 140/319 (43%), Gaps = 6/319 (1%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A L PE+ L F++ + L + + + +E+++R R F+ I +A
Sbjct: 234 AGLPPEAKL----FNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT-MISGMCRA 288
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+D A M + G+ V AL+ G E+ + +F + G++PN+
Sbjct: 289 GDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCG-RGMKPNAVV 347
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+ +I + C+ GD+ ++ + EMR + +RP+A + ++ G + + ++ M
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ Y I CK + + A + M++ G+ + TY LI G K G
Sbjct: 408 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 467
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A+++ M G EPD+ + M C+ G+ +T L++ + KG P T ++
Sbjct: 468 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 527
Query: 365 TGLASISKVAEANELIGLM 383
G + ++ A+ L+ M
Sbjct: 528 NGFCKLGQMKNADMLLNAM 546
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 12/309 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
++F+ +S + +A + L + E PD+ + + ++ G + I+ A
Sbjct: 276 VSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDV------YTYGALIQGLCRVGRIEDA 329
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
FE+M G++ + L+ + E + + E + G+ P++ TYN ++
Sbjct: 330 RGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREM-RERGVRPDAVTYNAIVN 388
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + D S I+ EMR +RP+ + L+ G+ KE + + ++ Q M G+
Sbjct: 389 GLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGL 448
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I L K RS +A+ +L M+ G++P+ TY +I F ++G+++ +L
Sbjct: 449 DEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLL 508
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N G +P + + C+ G+ + A + A + G P T L+ G
Sbjct: 509 KEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKH 568
Query: 371 SKVAEANEL 379
KV + EL
Sbjct: 569 GKVTDIEEL 577
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 1/266 (0%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
++ + +++ A + F M + + N LL S N + V++ F + GI
Sbjct: 228 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA-GIA 286
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TYN +I C+ GD + + +MR + P+ + L+ G+ K E+V +
Sbjct: 287 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 346
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M+ G + YN I CK ++ A M + G+KPN+ TY LI F K
Sbjct: 347 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 406
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG ++GA KLF M G P+ + + C+ G A K+ + G + T
Sbjct: 407 EGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 466
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+L+ GL ++ EA E+ M K
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLK 492
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++++ + F +M + GL V N+L+ G + EEV +F E V G P+ TYN
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV-GCVPDIITYN 363
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ + +EM+ ++PN + L+ F KE + K+ M +
Sbjct: 364 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRT 423
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ Y I + CK EA LL+ ML G+K N+ TY L+ G K G + A
Sbjct: 424 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 483
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+++F SM G P+ + + + E A+K+ + P S++ G
Sbjct: 484 EEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWG 543
Query: 367 LASISKVAEANELIGLMKKR 386
S K+ E ++ MK R
Sbjct: 544 HCSQRKLEETKLILEEMKSR 563
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GI 178
YG+ ++ F EM G + N L+ C +E++ R F F ++ G+
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLI-NCYC--KFEKMPRAFEYFSEMKNNGL 390
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN TY+ +I +FC+ G + +MRR + PN + L+ K + K
Sbjct: 391 KPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 450
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L M + G+ + Y + LCK R EA+ + ML GI PN Y L+HG+
Sbjct: 451 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 510
Query: 299 KEGNLEGAKKLFASMTNGGCEPD 321
K +E A K+ MT +PD
Sbjct: 511 KAERMEDAMKILKQMTECNIKPD 533
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + M+ A++ F +M + GL + +L+ + N E ++ + + G++
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA-GVKL 462
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY ++ C++G + M + I PN + L+ G+ K + ED K+L
Sbjct: 463 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 522
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M +C I + +Y I C ++ EE K +L+ M SRGI N +I + K
Sbjct: 523 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 582
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A F M + G E + + LC+ G E A+ ++ G P+ +
Sbjct: 583 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVY 642
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL + + A +L M+ R
Sbjct: 643 TSLIDGLCKNNCIESAKKLFDEMQCR 668
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 110 NERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
N++ + + Y +A ++ AM+ ++M + ++ + +++ G + EE K I
Sbjct: 498 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL 557
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E K GI N +I ++ ++G SS + EM+ + + +L+ G K
Sbjct: 558 EEM-KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCK 616
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E M G+ V VY I LCK E AK L D M RG+ P++
Sbjct: 617 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITA 676
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI G K GNL+ A L + MT E D + + Q GE A K +
Sbjct: 677 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMI 736
Query: 350 AKGWVPH 356
KG +P
Sbjct: 737 EKGILPE 743
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 1/282 (0%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
R L NE + I +A + A + +M + G++ ++ ALL G +
Sbjct: 422 RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMI 481
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E + +F K GI PN + Y ++ + ++ IL +M +I+P+ +G +
Sbjct: 482 EAEEVFRSMLK-DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 540
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G + K E+ +L+ M+ GI++ + I + K +S +A M G+
Sbjct: 541 IWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGV 600
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+ + TY LI G K G +E A F M + G +P+ + LC+ E+A K
Sbjct: 601 EATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKK 660
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ +G P + +L+ G + EA LI M +
Sbjct: 661 LFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTE 702
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 89/237 (37%), Gaps = 35/237 (14%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S ++ + F E G + MR P A LL K + V K
Sbjct: 219 SGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFN 278
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M GIA V YN+ I LCK E ++ L M G+ P++ TY LI G+GK G
Sbjct: 279 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 338
Query: 302 NLEGAKKLFASMTNGGCEPD---------SYCFF-----MFTYF---------------- 331
+LE LF M + GC PD YC F F YF
Sbjct: 339 SLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYS 398
Query: 332 -----LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
C+ G + A+K+ G +P+ T SL+ + EA +L+ M
Sbjct: 399 TLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%)
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
SG V+++ +L EEA M + P + L+H K GN + +K
Sbjct: 216 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRK 275
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
F M G P + + + +LC+ G+ E + ++ G P T SL+ G
Sbjct: 276 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335
Query: 369 SISKVAEANELIGLMK 384
+ + E L MK
Sbjct: 336 KVGSLEEVASLFNEMK 351
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ +M+ + V N ++ ++ ++ +F E + GI PN TY+
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSS 300
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C G S +L++M K I PN F L+ F KE K+ + K+ M K
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I + YN + C R ++AK + + M+S+ P++ TY LI GF K +E
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF M++ G D+ + L G+ + A KV + ++ G P T L+ GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 368 ASISKVAEANELIGLMKK 385
+ K+ +A E+ M+K
Sbjct: 481 CNNGKLEKALEVFDYMQK 498
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 107/266 (40%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I A+ ++M + G R L+ G L E + + G +P
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQP 223
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY V+ C+ GD+ ++L +M I + F ++ K +D +
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME GI V Y+ I LC R +A LL M+ + I PNL T+ LI F KE
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A+KL+ M +PD + + C + A ++ ++K P T
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V + EL M R
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHR 429
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 10/323 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + F+ + L + H + L +E++T RP++ + + YG+ + A
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL-ISCLCSYGRWS---DA 314
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q +M + + ++ NAL+ + + E ++++ + K I+P+ TYN ++
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK-RSIDPDIFTYNSLVN 373
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + M K P+ + L+ GF K + ED ++ + M G+
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y IQ L + A+ + M+S G+ P++ TY L+ G G LE A ++F
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + D Y + +C+ G+ + + + KG P+ T ++++GL S
Sbjct: 494 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 553
Query: 371 SKVAEANELIGLMKKR--FPKSG 391
+ EA L+ MK+ P SG
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSG 576
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 7/263 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK---VYGIEPNSE 183
+D A+ F M K S+ N LL K ++ V + + + V+G+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY---- 121
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +I FC S ++L +M + P+ LL G+ + D ++ M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G + I L ++ EA AL+D M+ RG +PNL TY +++G K G+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A L M E D F LC+ + AL + + KG P+ T SL
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 364 VTGLASISKVAEANELIGLMKKR 386
++ L S + ++A++L+ M ++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEK 324
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 8/312 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ +S +S L ++ SQLL ++ K P+L F+ + ++ A +
Sbjct: 296 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT---FNALIDAFVKEGKFVE-AEK 351
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+++M K + + N+L+ G + ++ K++F EF P+ TYN +IK F
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGF 410
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+S + EM + + + + L+ G + + ++ KV + M G+ +
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+I + LC + E+A + D M IK ++ Y +I G K G ++ LF S
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
++ G +P+ + LC + A + + G +P+ T +L+
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 373 VAEANELIGLMK 384
A + ELI M+
Sbjct: 591 KAASAELIREMR 602
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP+ T + ++ +C S +++ +M RP+ F L+ G + +K +
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G + Y + + LCK ++ A LL+ M + I+ ++ + +I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K +++ A LF M G P+ + LC G + A ++ + K P+
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K EA +L M KR
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S Y +++++ + M + P+ +F LL+ K K++ V + +
Sbjct: 50 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 109
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M++ I G+ YNI I C+ + A ALL M+ G +P++ T L++G+
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A L M G PD+ F + L + A+ + + +G P+ T
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 362 SLVTGL 367
+V GL
Sbjct: 230 VVVNGL 235
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 116 HSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI+L G N ++ A++ F+ M K ++ + ++ G + ++ +F
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL- 531
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G++PN TYN +I C Y++L +M+ PN+ + L+ ++
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 591
Query: 234 EDVGKVLQMMEKC 246
++++ M C
Sbjct: 592 AASAELIREMRSC 604
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D M +SI + L ++ + ++ + +++ + + I +A +D
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 132 QTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
F + G++ +V N ++ G +L + Y +K++ + P PNS TYN
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-----PNSGTYNT 580
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+I++ GD ++ ++ EMR +A+ GL+
Sbjct: 581 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 37/335 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F + L + F + L+E ++ R L ++ F + + Y +A + A++TFE+
Sbjct: 156 GFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSKDT-FKI-IVRRYARARKVKEAVETFEK 213
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M +GL+ + N L+ SK ++ IF E + P+ +TY +++ +
Sbjct: 214 MSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEK 273
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D + ++ EM I+P+ +G+L++ F K K ++ KV ME+ G +VY
Sbjct: 274 DLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYC 333
Query: 257 IRIQSLCKLKRSEEA---------------------------KAL--------LDGMLSR 281
+ I L ++R +EA +AL +D M
Sbjct: 334 MLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKS 393
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI PN TY +++ K +E A LF M GCEP+ + M C + A
Sbjct: 394 GIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMA 453
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LKV + KG +P +L+ GL +++ EA
Sbjct: 454 LKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEA 488
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 1/227 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + ++ D A++ F EM++ G S L+ G + +E + F + K G
Sbjct: 301 ISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYF-QLSKESG 359
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
T N VI ++C + + + ++ EMR+ I PN + ++L K K E+
Sbjct: 360 FPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAY 419
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ Q ME+ G +N Y + + C +R + A + M +G+ P + + LI+G
Sbjct: 420 NLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGL 479
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
+ LE A F M + G P F L +GG A +V
Sbjct: 480 CFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEV 526
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 140/313 (44%), Gaps = 9/313 (2%)
Query: 77 AFSIAVSKLSQAN-HFNAISQL--LEELKTRPDLRQNERFHVHSIVLYGQANM-IDHAMQ 132
AFS +S ++ H AIS ++E RP+L + I G+ M +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVT----YNAVIDACGKGGMEFKQVAK 325
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+EM + G++ N+LL C +E + +F E IE + +YN ++ +
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTLLDAI 384
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G + ILA+M K I PN + ++ GF K ++++ + M GIA
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN + K+ RSEEA +L M S GIK ++ TY L+ G+GK+G + KK+F
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M P+ + +GG Y+ A+++ R + G +L+ L
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 373 VAEANELIGLMKK 385
V A LI M K
Sbjct: 565 VGSAVSLIDEMTK 577
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A D A+ F EM G+ + N LL EE I E V GI+
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKK 477
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN ++ + + G V + EM+R+ + PN + L+ G+ K Y++ ++
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ + G+ + V +Y+ I +LCK A +L+D M GI PN+ TY +I FG+
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 301 GNLEGAKKLFASMTNGGCEP 320
++ + A +NGG P
Sbjct: 598 ATMDRS----ADYSNGGSLP 613
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 67/174 (38%), Gaps = 36/174 (20%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN---- 302
G + V ++ I + + EEA ++ + M G++PNL TY +I GK G
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 303 --------------------------------LEGAKKLFASMTNGGCEPDSYCFFMFTY 330
E A+ LF MTN E D + +
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+C+GG+ + A ++ K +P+ + +++ G A + EA L G M+
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 35/325 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELK-TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++ I V L + F + L E++ TR + +E F H Y +A++ A++ F
Sbjct: 117 SYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFW-HVFTAYSRADLPQDAIRAFN 175
Query: 136 EMDKYGLRQSVDALNALLLGCILSKN-------YEEVKRIFTEFPKVYGI---------- 178
M ++G+R VD L+ LL K+ +++VK +F K Y I
Sbjct: 176 RMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVGD 235
Query: 179 EPNSE----------------TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
N++ YN ++++ C+ G Y + EM + P+A + +
Sbjct: 236 SNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSI 295
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+ +E+ V +VL+ ++ + V YN I+ LCK + EEA +LD M+ RG
Sbjct: 296 FIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERG 355
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P+ +Y + + A L M C PD + + M L + G ++ A
Sbjct: 356 VTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGRFDRAN 415
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGL 367
+V + +G+ P ST ++ G
Sbjct: 416 EVWESMGKRGFYPSVSTYAVMIHGF 440
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR--RKSIRPNATDFGLLL 224
R F ++ G EP+ ++Y+ V+ SG + ++ L E+R R S+ + F +
Sbjct: 100 RFFLWAKRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHEL-FWHVF 158
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
+ + +D + M + GI +GV+ + + +LCK K A+ D + S
Sbjct: 159 TAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKS-VFN 217
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P++ TY L G+G G+ A+K+F M GC D + LC+GG+ + A K+
Sbjct: 218 PSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKM 277
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 138/331 (41%), Gaps = 22/331 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D ++ ++ L QA + L +E+K + N + ++I++ + +A +I+ A
Sbjct: 451 DASTYTKVITFLCQAKRVDKAFLLFQEMKK---VGVNPDVYTYTILIDSFCKAGLIEQAQ 507
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F+EM G +V ALL + SK + IF PN+ TY+ +I
Sbjct: 508 SWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD-ACYPNAITYSALIDG 566
Query: 192 FCESGDSSSVYSILAEM----------------RRKSIRPNATDFGLLLAGFYKEHKYED 235
C++G+ + A++ +I PN +G L+ G K K D
Sbjct: 567 LCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSD 626
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L M G VY+ + CK+ + A+ + M G P++ TY LI
Sbjct: 627 AHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLID 686
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K+G L+ A K+ + M C P+ + LC+ GE E AL + KG P
Sbjct: 687 RMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSP 746
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ T +L+ GL KV EL MK +
Sbjct: 747 NVVTYTALIDGLGKAGKVDAGLELFMQMKTK 777
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 13/233 (5%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EPN Y+ ++ FC+ G+ S + M + P+ + L+ +K+ + +
Sbjct: 638 GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 697
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KVL M K V Y + LCK +E+A LL M +G PN+ TY LI G
Sbjct: 698 MKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDG 757
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
GK G ++ +LF M GC P+ + + C G + A + W +
Sbjct: 758 LGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKY 817
Query: 357 FSTMKSLVTG-----LASISKVAEANE--------LIGLMKKRFPKSGDMWNA 396
++ V G LAS+ + E + G++ F K+G + A
Sbjct: 818 LQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETA 870
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C G + I+ EM RK P+A+ + ++ + + + + Q M+K G+
Sbjct: 425 RCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVN 484
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I I S CK E+A++ D M S G PN+ TY L+H + K L A +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDI 544
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG----------------W 353
F M C P++ + LC+ GE + A +V +
Sbjct: 545 FHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTI 604
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLM 383
P+ T +LV GL KV++A++L+ M
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAM 634
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 17/274 (6%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A Q +EM + G ++ +K ++ +F E KV G+ P+ TY
Sbjct: 434 EKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKV-GVNPDVYTYTI 492
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I SFC++G S EMR PN + LL + K + + M
Sbjct: 493 LIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDA 552
Query: 248 IASGVNVYNIRIQSLCK---LKRSEEAKALL-------------DGMLSRGIKPNLDTYK 291
Y+ I LCK ++++ E A L +G + I PN+ TY
Sbjct: 553 CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYG 612
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L++G K + A L +M GCEP+ + C+ GE ++A +V
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKC 672
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G++P T SL+ + ++ A +++ M K
Sbjct: 673 GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 706
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 80/200 (40%), Gaps = 12/200 (6%)
Query: 149 LNALLLGCILSKNY----EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
LN L+ C L + EE+ R+ K +G P++ TYN +++ +G + +
Sbjct: 172 LNVLVRRCCLQGLWGEALEELGRL-----KDFGYRPSAVTYNALVQVLASAGQVEMAFRV 226
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
EM + + G KE ++ G L ++E+ + I L +
Sbjct: 227 QKEMSASGFCMDRSTVGSFAQALCKEGRW---GDALDLLEREDFKLDTVLCTQMISGLME 283
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
EA + L M PN+ TY+ L+ GF K+ L K++ M GC P
Sbjct: 284 ASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSL 343
Query: 325 FFMFTYFLCQGGEYETALKV 344
F + C +Y A K+
Sbjct: 344 FNSLVHTYCNAEDYAYAYKL 363
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 98/297 (32%), Gaps = 72/297 (24%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A + F M K G SV +L+ + ++ ++ K PN TY
Sbjct: 659 IDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD-SCNPNVVTYT 717
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G++ ++L+ M +K PN + L+ G K K + ++ M+
Sbjct: 718 AMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTK 777
Query: 247 GIASGVNVYNIRIQSLC-------------KLKRSEEAK--------------------A 273
G A Y I I C ++K++ K
Sbjct: 778 GCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLG 837
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL------------------------ 309
LL+ M S P Y LI F K G LE A +L
Sbjct: 838 LLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQ 897
Query: 310 --------------FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
++ M G PD F L + ++ AL++C +G
Sbjct: 898 ALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEG 954
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS-------KNYEEVKRIFTEFPK 174
G+A +D ++ F +M G + L+ C + +E+K+ T +PK
Sbjct: 759 GKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQ--THWPK 816
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ Y ++ F + +S +L EM P A +G+L+ F K + E
Sbjct: 817 YL------QGYRTTVQGFSKRFLAS--LGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLE 868
Query: 235 DVGKVL-QMMEKCGIASGVNV-----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
++ +MME ++S +N+ + IQ+LC + EEA AL M RGI P+L
Sbjct: 869 TALELHKEMME---VSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLS 925
Query: 289 TYKHLIHGF 297
+ L+ G
Sbjct: 926 AFVCLVKGL 934
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 112/235 (47%), Gaps = 1/235 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + MID+A++TFE + G + SV N +L + K E V +F E G
Sbjct: 170 IRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSD-KG 228
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN T+N +I C G+ ++L +M P + LL + K+ +Y+
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+++ M GI + V YN+ I +LC RS +A LL M I PN TY LI+GF
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
KEG + A ++F M+ P+ + C G++E AL++ A G
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 15/242 (6%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A ++M++ G ++ N LL Y+ + ++ GIE + TYN I
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELI-DYMICKGIEADVCTYNVFI 310
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C + S+ Y +L +MR++ I PN + L+ GF KE K +V M K ++
Sbjct: 311 DNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 370
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I C + EEA LLD M + G++ N + GN+ A K+
Sbjct: 371 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN------------EHGNVTEAMKV 418
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK-VCRASMAKGWVPHFSTMKSLVTGLA 368
+A M G D + + LC+ G+ A K +C S G VP+ T ++ G
Sbjct: 419 YAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI-GLVPNSITYDCIINGYG 477
Query: 369 SI 370
SI
Sbjct: 478 SI 479
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 127/320 (39%), Gaps = 28/320 (8%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++ + L NH +A + LL + + + NE + I + + I A Q
Sbjct: 302 DVCTYNVFIDNLC-TNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQV 360
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF----------------TEFPKVYG 177
F EM K+ L + NAL+ G ++EE R+ TE KVY
Sbjct: 361 FNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEHGNVTEAMKVYA 420
Query: 178 I------EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ + T N ++ S C G L M R + PN+ + ++ G+
Sbjct: 421 VMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIG 480
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT-- 289
+ M KCG Y ++ LCK EAK L+ + I +D+
Sbjct: 481 DPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL--HYIPGAVDSVM 538
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y L+ K GNL A LF M PDSY + LC+ G+ TA+ + +M
Sbjct: 539 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAM 598
Query: 350 AKGWV-PHFSTMKSLVTGLA 368
+G + P+ LV GL+
Sbjct: 599 GRGTLFPNHVMYTCLVDGLS 618
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 183 ETYNKVIKSFCESG-DSSSVYSILAEMRR--KSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
++ +++ C+ G S S++ L + SI P+ F LL+ + KE + +
Sbjct: 129 DSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSI-PSV--FDLLIRVYLKEGMIDYAVET 185
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+++ G V N+ + S+ K KR+E +L M +GI PN+ T+ LI+G
Sbjct: 186 FELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCV 245
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EGNL+ A L M G P + + C+ G Y+ A+++ + KG T
Sbjct: 246 EGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCT 305
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+ L + + A+A L+ M+K
Sbjct: 306 YNVFIDNLCTNHRSAKAYLLLKKMRK 331
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 100/250 (40%), Gaps = 16/250 (6%)
Query: 145 SVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+VD++ N LL S N E +F + + + P+S TY+ ++ C G + +
Sbjct: 533 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQ-NNVLPDSYTYSSLLTGLCRKGKAVTAV 591
Query: 203 SILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ M R ++ PN + L+ G K + + M K G +N I S
Sbjct: 592 CLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDS 651
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
+ + +A M G+ PNL TY L+HGF K+ L L+++M G PD
Sbjct: 652 CSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPD 711
Query: 322 SYCFFMFTYFLCQGGEYETALK------------VCRASMAKGWVPHFSTMKSLVTGLAS 369
F L + G + +K V + G +P + +L+ G+
Sbjct: 712 KLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVIPKHAQYITLINGMCR 771
Query: 370 ISKVAEANEL 379
+ + A +L
Sbjct: 772 VGDIQGAFKL 781
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 138/331 (41%), Gaps = 26/331 (7%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHAM 131
+ + ++ V LS+A H A EE+ + F+ + S GQ + A
Sbjct: 606 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQ---MMKAN 662
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVI 189
F M +G+ ++ N LL G SK + + R + + + GI P+ T++ +I
Sbjct: 663 DFFSTMRWWGVCPNLATYNILLHG--FSKK-QALLRYLSLYSTMMREGIFPDKLTFHSLI 719
Query: 190 KSFCESG--------------DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+SG + S+V +L EM + P + L+ G + +
Sbjct: 720 LGLSKSGIPDLGVKLLGKMIMEESTV--VLHEMLENGVIPKHAQYITLINGMCRVGDIQG 777
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
K+ ME G S + ++ L ++E+A +LD ML + P + T+ L+H
Sbjct: 778 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 837
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F ++ + A KL M G + D + + +C G+ A ++ + P
Sbjct: 838 RFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCP 897
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +T LV +++ + + + +L+ +++R
Sbjct: 898 NITTYAVLVDAISAANNLIQGEKLLTDLQER 928
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+P+ ++LA K+ + E V + + M GI V +NI I LC ++A
Sbjct: 195 KPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGN 254
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M G P + TY L++ + K+G + A +L M G E D + +F LC
Sbjct: 255 LLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLC 314
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A + + + P+ T +L+ G K+ A ++ M K
Sbjct: 315 TNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSK 366
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++ G + +L M R + P F L+ F ++ K + K+ +ME CG
Sbjct: 800 MVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCG 859
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V YN+ I +C S A L + M R + PN+ TY L+ NL +
Sbjct: 860 LKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGE 919
Query: 308 KLFASMTNGG 317
KL + G
Sbjct: 920 KLLTDLQERG 929
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++ + YN +I C +GDS++ + + EMR + + PN T + +L+ +
Sbjct: 859 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 918
Query: 237 GKVLQMMEKCGIAS 250
K+L +++ G+ S
Sbjct: 919 EKLLTDLQERGLIS 932
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 40/329 (12%)
Query: 85 LSQANHFNAISQLLEEL-KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
LS+ F A+ L+EE+ KT P+L + E F V + + ANM+ A++ +EM KYGL
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVV-LMRRFASANMVKKAVEVLDEMPKYGLE 199
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
LL + + +E ++F + + + PN + ++ +C G
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDMREKF--PPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+L +M+ + P+ F LL+G+ K D ++ M K G VN Y + IQ+LC
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 264 KL-KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG--------------------- 301
+ KR +EA + M G + ++ TY LI GF K G
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 302 --------------NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
E +L M GC PD + + C+ GE + A+++
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEA 376
A G P T ++ G S + EA
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIE 179
Y A + A +M K G +V+ L+ C K +E R+F E + YG E
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER-YGCE 339
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
+ TY +I FC+ G YS+L +MR+K + P+ + ++ K+ ++E+ ++
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL 399
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++ M++ G + +YN+ I+ CKL +EA L + M + G+ P +DT+ +I+GF
Sbjct: 400 IEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS 459
Query: 300 EGNLEGAKKLFASMTNGG 317
+G L A F M + G
Sbjct: 460 QGFLIEACNHFKEMVSRG 477
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G+ M++ + + +M + G+ ++ N L+ G + + + +R+F E + I+P
Sbjct: 197 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKP 255
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +IK +C++G + L M K + + + ++ Y + + +
Sbjct: 256 DVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALY 315
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M++ G+ + +++ I LCK + E A+ + M+ +G KPN+ Y LI G+ K
Sbjct: 316 QEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKT 375
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++E A +L M + G PD + + LC+ G E A+ + G +
Sbjct: 376 GSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFY 435
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL +V EA L M ++
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEK 461
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 134/323 (41%), Gaps = 41/323 (12%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+ +++E + +PD+ + I Y +A A++ M+ GL ++
Sbjct: 244 VFEVMESGRIKPDVVT----YNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMI 299
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
C ++ ++ E + G++ ++ VI C+ G + Y++ M RK
Sbjct: 300 QACYADSDFSSCVALYQEMDE-KGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGS 358
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+PN + +L+ G+ K ED ++L M G V Y++ + LCK R EEA
Sbjct: 359 KPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMD 418
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-------- 325
G+ N Y LI G GK G ++ A++LF M+ GC DSYC+
Sbjct: 419 YFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 326 -----------------------FMFTYFLCQGGEY-----ETALKVCRASMAKGWVPHF 357
++TY + G + E ALK+ + KG P
Sbjct: 479 KHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTA 538
Query: 358 STMKSLVTGLASISKVAEANELI 380
+ +++L TGL KVA A +++
Sbjct: 539 ACLRALSTGLCLSGKVARACKIL 561
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 1/226 (0%)
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
L+K+ + ++ I +E K + N +IKSF + G + + +M+ I P
Sbjct: 164 LAKDVDRIRFICSEIRK-FEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTL 222
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ L+ G + +V ++ME I V YN I+ CK ++++A L
Sbjct: 223 YTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRV 282
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M ++G++ + TY +I + + L+ M G + + F + LC+ G+
Sbjct: 283 METKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGK 342
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
V + KG P+ + L+ G A V +A L+ M
Sbjct: 343 LNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRM 388
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 110/277 (39%), Gaps = 4/277 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
AFS+ + L + N + E + R + N + I Y + ++ A++
Sbjct: 329 AFSLVIGGLCKEGKLNEGYAVFENM-IRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHR 387
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G V + ++ G + EE F + + G+ NS Y+ +I ++G
Sbjct: 388 MIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYF-QTCRFNGLAINSMFYSSLIDGLGKAG 446
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNVY 255
+ EM K ++ + L+ F K K ++ + + ME+ G V Y
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTY 506
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I I + K R+EEA L D M+ +GI P + L G G + A K+ +
Sbjct: 507 TILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAP 566
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
G D+ C M LC+ G + A K+ +G
Sbjct: 567 MGVILDAACEDMINT-LCKAGRIKEACKLADGITERG 602
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 92/246 (37%), Gaps = 2/246 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S+ V+ L + + + L N F+ I G+A +D A +
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEAMDYFQTCRFN-GLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEEM + G + NAL+ +E +F + G + TY +I
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMF 514
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + + M K I P A L G K K+L + G+
Sbjct: 515 KEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVILDAA 574
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++ I +LCK R +EA L DG+ RG + +I+ K G + A KL S
Sbjct: 575 CEDM-INTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSK 633
Query: 314 TNGGCE 319
G E
Sbjct: 634 IGIGYE 639
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N E Y ++ + D + I +E+R+ + L+ F K E++ V
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVW 210
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ GI + YN + L + A+ + + M S IKP++ TY +I G+ K
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKA 270
Query: 301 GNLEGAKKLFASMTNGGCEPD 321
G + A + M G E D
Sbjct: 271 GQTQKALEKLRVMETKGLEAD 291
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 36/304 (11%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
M+ +EM + G S A++ L+ G I + E + + K+ G+ PN YN +I
Sbjct: 314 GMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKL-GVVPNLFVYNSMI 372
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C++G + + M + + PN + +L+ GF + K + M +CGI+
Sbjct: 373 NSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGIS 432
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ V YN I CK + + A+ L M+ +G+KP + TY LI G+ K+G + A KL
Sbjct: 433 ATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKL 492
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV-----------------------CR 346
+ MT G P++ F LCQ + A K+ CR
Sbjct: 493 YHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCR 552
Query: 347 AS------------MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMW 394
+ KG P T + L+ GL S +V+EA E I + + + ++
Sbjct: 553 EGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELC 612
Query: 395 NAAL 398
AL
Sbjct: 613 YTAL 616
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 116 HSIVLYGQANMIDHAM-QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+++++ G N D + + EM G++ L+ G I S N +K+ F EF
Sbjct: 648 YAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGN---LKKAF-EFWY 703
Query: 175 VY---GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ G PNS TY ++ ++G + + M PN +G L KE
Sbjct: 704 IMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEG 763
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
E+ ++ M + A+ V YNI I+ C++ + +EA LLD M+ G+ P+ TY
Sbjct: 764 NMENALQLHNAMLQGSFANTVT-YNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYS 822
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
I+ + K GN++ A ++ M G +PD F + C GE + AL++ M +
Sbjct: 823 TFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLR 882
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G P ST SL+ LA +++ +
Sbjct: 883 GLKPTQSTYHSLMVQLAQRARLTQV 907
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 95 SQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL- 153
++LL + L N+ + I +G+ +D A F +M + G+ +V + N+++
Sbjct: 384 AELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMIN 443
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
C K + + +F E G++P TY +I +C+ G + + EM K I
Sbjct: 444 CQCKFGK-MKMAELLFKEMVD-KGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGI 501
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PN F L+ G + +K + K+ M + I YN+ I+ C+ + A
Sbjct: 502 APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFE 561
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LLD M+ +G+ P+ TY+ LI G G + AK+ + + D C+ C
Sbjct: 562 LLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFC 621
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G + AL + + +G + L++G
Sbjct: 622 KEGRIKEALVARQEMVGRGLQMDLVSYAVLISG 654
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 140/350 (40%), Gaps = 53/350 (15%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDH--AM 131
S ++ L++ F + +L + L +PD +++++V+ + D A
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDC------YIYTVVVKCLCELKDFNKAK 245
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKN-YE--EVKRIFTEFPKVYGIEPNSETYNKV 188
+ + + G S+ N + G SK +E EVKR E G++ + TY +
Sbjct: 246 EIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGE----KGLKADLVTYCTL 301
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C + ++ EM P+ L+ G K E ++L + K G+
Sbjct: 302 VLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGV 361
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE-------- 300
+ VYN I SLCK + EEA+ L M RG+ PN TY LI GFG+
Sbjct: 362 VPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFY 421
Query: 301 ---------------------------GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
G ++ A+ LF M + G +P + C
Sbjct: 422 YFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYC 481
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ G A K+ KG P+ T +L+ GL I+K+AEA++L M
Sbjct: 482 KDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEM 531
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 10/260 (3%)
Query: 126 MIDHAMQTFEEMD---------KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
+I H +Q MD YGL V L+ALL + + +V +F
Sbjct: 161 LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNA- 219
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++P+ Y V+K CE D + I+ + + + + + G K + +
Sbjct: 220 GVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEA 279
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V + + + G+ + + Y + LC+++ E ++D M+ G P+ LI G
Sbjct: 280 VEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEG 339
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G++EGA +L + G P+ + + LC+ G+ E A + +G P+
Sbjct: 340 LIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPN 399
Query: 357 FSTMKSLVTGLASISKVAEA 376
T L+ G +K+ A
Sbjct: 400 DVTYTILIDGFGRRAKLDVA 419
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 122/332 (36%), Gaps = 71/332 (21%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ++ A + + EM G+ + AL+ G E ++F E ++ I P
Sbjct: 480 YCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVEL-KILP 538
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +I+ C G+++ + +L EM +K + P+ + L+AG + + + +
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFI 598
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA--------------------------- 273
+ Y +Q CK R +EA
Sbjct: 599 NDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ 658
Query: 274 -------LLDGMLSRGIKPNLDTYKHLIHGFGKEGNL------------EG--------- 305
LL M +G++P+ Y LI GF K GNL EG
Sbjct: 659 NDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYT 718
Query: 306 --------------AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
AK LF M G P+ + F L + G E AL++ A M +
Sbjct: 719 ALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNA-MLQ 777
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G + T L+ G I K EA +L+ +M
Sbjct: 778 GSFANTVTYNILIRGYCQIGKFQEAAKLLDVM 809
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 88/200 (44%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+S ++ +I+ + ++ ++ MR + P LL + K+ V ++
Sbjct: 154 SSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELF 213
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ +Y + ++ LC+LK +AK +++ G ++ TY I+G K
Sbjct: 214 DTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKS 273
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+ A ++ S+ G + D + LC+ E+E +++ + G+VP + +
Sbjct: 274 KRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAV 333
Query: 361 KSLVTGLASISKVAEANELI 380
L+ GL + + A EL+
Sbjct: 334 SGLIEGLIKMGSIEGAFELL 353
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 37/335 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F + L + F + L+E ++ R L ++ F + + Y +A + A++TFE+
Sbjct: 156 GFHNLIEALGKIKQFRLVWSLVEAMRCRSCLSKDT-FKI-IVRRYARARKVKEAVETFEK 213
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M +GL+ + N L+ SK ++ IF E + P+ +TY +++ +
Sbjct: 214 MSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIPDLKTYTVLMEGWGHEK 273
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D + ++ EM I+P+ +G+L++ F K K ++ KV ME+ G +VY
Sbjct: 274 DLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYC 333
Query: 257 IRIQSLCKLKRSEEA---------------------------KAL--------LDGMLSR 281
+ I L ++R +EA +AL +D M
Sbjct: 334 MLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKS 393
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI PN TY +++ K +E A LF M GCEP+ + M C + A
Sbjct: 394 GIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMA 453
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LKV + KG +P +L+ GL +++ EA
Sbjct: 454 LKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEA 488
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 1/227 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + ++ D A++ F EM++ G S L+ G + +E + F + K G
Sbjct: 301 ISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYF-QLSKESG 359
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
T N VI ++C + + + ++ EMR+ I PN + ++L K K E+
Sbjct: 360 FPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAY 419
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ Q ME+ G +N Y + + C +R + A + M +G+ P + + LI+G
Sbjct: 420 NLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGL 479
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
E LE A F M + G P F L +GG A +V
Sbjct: 480 CFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEV 526
>gi|413951889|gb|AFW84538.1| hypothetical protein ZEAMMB73_463361, partial [Zea mays]
Length = 423
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 9/263 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKY-GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-- 177
+ +A M D A+ F ++ G + + NALL + ++ Y E F +G
Sbjct: 134 FSRALMPDAALAAFRDLPSLLGCNPGIRSHNALLDAFVRARRYSEADAFFASLS--HGAC 191
Query: 178 ---IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ PN +TYN +++S C GD S+ + +RR+ + P+ + L++G K + +
Sbjct: 192 GRRLAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLD 251
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPNLDTYKHL 293
+ +L M G+ + YN + K E+A + + ++ G PNL TYK +
Sbjct: 252 NALDLLDEMPDYGVQADAVCYNALLSGCFKTGMFEKAIKVWEQLVRDPGASPNLATYKVM 311
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ G K G + A ++++ M +PD+ + + + LC+ G+ ++A +V + G
Sbjct: 312 LDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYGILIHGLCRSGDVDSAARVYSDMVKAGL 371
Query: 354 VPHFSTMKSLVTGLASISKVAEA 376
V + SL+ G + + EA
Sbjct: 372 VLDVAVYNSLIKGFCKVGRTGEA 394
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 14/260 (5%)
Query: 47 ARLKSESNPF--RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR 104
AR SE++ F + CG LAP + ++I + L + L L+ R
Sbjct: 173 ARRYSEADAFFASLSHGACGRRLAP----NLQTYNIILRSLCARGDVDRAVSLFSSLRRR 228
Query: 105 ---PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
PD R + +V + Q +D+A+ +EM YG++ NALL GC +
Sbjct: 229 GVAPD-RVTYSTLMSGLVKHDQ---LDNALDLLDEMPDYGVQADAVCYNALLSGCFKTGM 284
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+E+ +++ + + G PN TY ++ C+ G + + M + +P+ +G
Sbjct: 285 FEKAIKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMVANNHQPDTVTYG 344
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ G + + +V M K G+ V VYN I+ CK+ R+ EA D
Sbjct: 345 ILIHGLCRSGDVDSAARVYSDMVKAGLVLDVAVYNSLIKGFCKVGRTGEAWKFWDSTGFS 404
Query: 282 GIKPNLDTYKHLIHGFGKEG 301
GI+ + TY ++ G G
Sbjct: 405 GIR-QITTYNVMMKGLLDSG 423
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC----EPDSYCFFMFTYFLCQGGE 337
G P + ++ L+ F + A FAS+++G C P+ + + LC G+
Sbjct: 155 GCNPGIRSHNALLDAFVRARRYSEADAFFASLSHGACGRRLAPNLQTYNIILRSLCARGD 214
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ A+ + + +G P T +L++GL ++ A +L+ M
Sbjct: 215 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLVKHDQLDNALDLLDEM 260
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 141/319 (44%), Gaps = 15/319 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH---VHSIVLYGQANMIDHAMQ 132
+ F+ + L +++ Q+ +++ + L ++ + + + G+A + +
Sbjct: 466 VTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLD 525
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE--PNSETYNKVIK 190
+ D Y ++ L+ L +V R + ++ +E P+ T+N +I
Sbjct: 526 AMPDPDTYAFNCCINGLSKL----------GDVSRALQVYNRMLELELVPDKVTFNILIA 575
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G+ ++ EM K+++P+ FG L+ G K + E +L +M G+
Sbjct: 576 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 635
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN + LCK R EEA L+ M+S G P+ TY L++ + + A +L
Sbjct: 636 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 695
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ + + G +PD+ + + L + G+ E A+ V + KG P T +L+ L
Sbjct: 696 SELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKA 755
Query: 371 SKVAEANELIGLMKKRFPK 389
+ EA L G M R +
Sbjct: 756 GDLEEARRLHGDMSSRVSR 774
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 147/355 (41%), Gaps = 44/355 (12%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D++ F+I ++ +A +F S L EE+ + +L+ + I +A ++ A
Sbjct: 566 DKVTFNILIAGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDI 624
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ M G+ +V NAL+ G S EE + E G P+S TY ++ + C
Sbjct: 625 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVS-SGCVPDSITYGSLVYALC 683
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +++E++ P+ + +L+ G +K + E VL+ M G V
Sbjct: 684 RASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGM---LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN I SLCK EEA+ L M +SR PN+ TY LI+G K G ++ A++L
Sbjct: 744 TYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELI 803
Query: 311 ASMTNGGCE---------------------------------------PDSYCFFMFTYF 331
M C+ PD+ F
Sbjct: 804 QEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDG 863
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ G+ + A V +A G+VP+ T L+ GL K+ A+ +I M +
Sbjct: 864 LCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDK 918
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+Q + M + L N L+ G + N+E+ +F E ++P+ T+
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEM-VAKNLQPDVMTFG 606
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++G + IL M + PN + L+ G K + E+ + L+ M
Sbjct: 607 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS 666
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y + +LC+ R+++A L+ + S G P+ TY L+ G K G E A
Sbjct: 667 GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQA 726
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV---CRASMAKGWVPHFSTMKSL 363
+ M G PD + LC+ G+ E A ++ + +++ VP+ T L
Sbjct: 727 ITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVL 786
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ GL + ++ EA ELI M ++
Sbjct: 787 INGLCKVGRIDEARELIQEMMRK 809
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 141/321 (43%), Gaps = 17/321 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYG--QANMID 128
D + + V L +A+ + QL+ ELK+ PD ++I++ G ++ +
Sbjct: 671 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV------TYNILVDGLWKSGQTE 724
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETYN 186
A+ EEM G V N L+ + + EE +R+ + PN TY+
Sbjct: 725 QAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYS 784
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKS--IRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+I C+ G ++ EM RKS + PN + L G K+ + ++++ +
Sbjct: 785 VLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844
Query: 245 KCG--IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
++ ++ I LCK +++EA + D M++ G PN+ TY L++G K
Sbjct: 845 DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDK 904
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A + SM + G PD + + C+ + AL++ ++G P+ T S
Sbjct: 905 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNS 964
Query: 363 LVTGLASISKVAEANELIGLM 383
++ GL + EA ++ M
Sbjct: 965 IIDGLCKSDQSGEAFQMFDDM 985
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL-AEMRRKSIRPNATDFGL 222
+V+R F ++ + YN V++S C +G+++ I EM R + P +
Sbjct: 162 DVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNT 221
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
++ G K ++ ++ + + + G V YN I SLCK EEA+ L M SR
Sbjct: 222 IINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS 281
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE----------------------- 319
PN+ TY LI+G K G ++ A++L MT C+
Sbjct: 282 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 341
Query: 320 ----------------PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
PD+ F LC+ G+ + A V +A G+VP+ T +L
Sbjct: 342 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 401
Query: 364 VTGLASISKVAEANELIGLMKKR 386
V GL K+ A+ +I M +
Sbjct: 402 VNGLCKADKMERAHAMIESMVDK 424
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 34/285 (11%)
Query: 77 AFSIAVSKLSQANHFNAIS--QLLEELKTRPDLRQNERFH-----------VHSIVLYG- 122
A ++ + + +H + ++ L++ L DL + R H V ++V Y
Sbjct: 726 AITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSV 785
Query: 123 ------QANMIDHAMQTFEEMDKYGLRQSVDAL------NALLLG-CILSKNYEEVKRIF 169
+ ID A + +EM +R+S D L N+ L G C S E + +
Sbjct: 786 LINGLCKVGRIDEARELIQEM----MRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMR 841
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ + P++ T++ +I C+ G + ++ +M PN + +L+ G K
Sbjct: 842 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCK 901
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
K E +++ M G+ V Y++ + + CK +EA LL GM SRG PN+ T
Sbjct: 902 TDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMT-NGGCEPD--SYCFFMFTYF 331
+ +I G K A ++F MT G PD +YC + F
Sbjct: 962 FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLF 1006
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 139/356 (39%), Gaps = 71/356 (19%)
Query: 20 NLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFS 79
N+ SL AG+ A AL I R +AR +AP + ++
Sbjct: 184 NIVLQSLCRAGETARALEIF---RGEMAR----------------DGVAPTI----VTYN 220
Query: 80 IAVSKLSQANHFNAISQLLEELKTRP-------------------DLRQNERFH------ 114
++ L ++N A +L EEL R DL + R H
Sbjct: 221 TIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 280
Query: 115 --VHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDAL------NALLLG-CIL 158
V ++V Y + ID A + +EM R+S D L N+ L G C
Sbjct: 281 SCVPNVVTYSVLINGLCKVGRIDEARELIQEM----TRKSCDVLPNIITYNSFLDGLCKQ 336
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
S E + + + + P++ T++ +I C+ G S+ +M PN
Sbjct: 337 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 396
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ L+ G K K E +++ M G+ V Y++ + + CK R +EA LL GM
Sbjct: 397 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 456
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT-NGGCEPD--SYCFFMFTYF 331
SRG PN+ T+ +I G K A ++F M G PD +YC + F
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLF 512
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 4/205 (1%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
++NK + +SG + + RPN + LL YK DV + L
Sbjct: 113 SFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGG--DVERTLGFF 170
Query: 244 EKCGIASG-VNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGKEG 301
+ +S V YNI +QSLC+ + A + G ++R G+ P + TY +I+G K
Sbjct: 171 RRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN 230
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
L +LF + G PD + LC+ G+ E A ++ ++ VP+ T
Sbjct: 231 ELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYS 290
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
L+ GL + ++ EA ELI M ++
Sbjct: 291 VLINGLCKVGRIDEARELIQEMTRK 315
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 93/249 (37%), Gaps = 36/249 (14%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A F++M G +V N L+ G + E + G+ P+ TY+
Sbjct: 871 DEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVD-KGVTPDVITYSV 929
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME--- 244
++ +FC++ +L M + PN F ++ G K + G+ QM +
Sbjct: 930 LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQS---GEAFQMFDDMT 986
Query: 245 -KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM--------------------LSRGI 283
K G+A Y I L + + +A+ LLD M +SR +
Sbjct: 987 LKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRAL 1046
Query: 284 K--------PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
P+ T+ LI G K GN E A LF M +PD F LC+
Sbjct: 1047 HRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 1106
Query: 336 GEYETALKV 344
G+ E +
Sbjct: 1107 GQVEATWDI 1115
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 82/184 (44%), Gaps = 7/184 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A+ +D A++ M G +V N+++ G S E ++F + +G+ P
Sbjct: 934 FCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAP 993
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I +G + +L M P+ F + G K DV + L
Sbjct: 994 DKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGL---SKLGDVSRAL 1046
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M + + +NI I CK E+A AL + M+++ ++P++ T+ LI G K
Sbjct: 1047 HRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 1106
Query: 301 GNLE 304
G +E
Sbjct: 1107 GQVE 1110
>gi|296089012|emb|CBI38715.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 135/288 (46%), Gaps = 7/288 (2%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+S+P +I ASL P +F I + KL A F+ + LL LK+
Sbjct: 66 IASQSDPLLAKEIFDLASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMRLKSE-QYS 124
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
N I +YG+AN+ D A++TF M ++ + LN LL + +NY ++
Sbjct: 125 INPSLFSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNRLLQLLVSHRNY--IRPA 182
Query: 169 FTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F F YG+ P++++YN ++ +FC +GD S Y++ +M ++ + P+ + +L+ G
Sbjct: 183 FDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQG 242
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++ + +L+ M G Y LC +EAK ++ MLS+G +
Sbjct: 243 LCRKSQVNRAVDLLEDMLNKGYVPDALSYTTF--GLCDQGLYDEAKNYVEEMLSKGFSLH 300
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ LI+GF G LE A ++ M G P + + +C+
Sbjct: 301 FSVFHALINGFCNVGKLEEACEVLREMLRHGEAPHTETWVAIIPRICE 348
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ +M+ + V N ++ ++ ++ +F E + GI PN TY+
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSS 262
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C G S +L++M K I PN F L+ F KE K+ + K+ M K
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I + YN + C R ++AK + + M+S+ P++ TY LI GF K +E
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 382
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF M++ G D+ + L G+ + A KV + ++ G P T L+ GL
Sbjct: 383 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 442
Query: 368 ASISKVAEANELIGLMKK 385
+ K+ +A E+ M+K
Sbjct: 443 CNNGKLEKALEVFDYMQK 460
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 107/266 (40%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I A+ ++M + G R L+ G L E + + G +P
Sbjct: 127 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQP 185
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY V+ C+ GD+ ++L +M I + F ++ K +D +
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME GI V Y+ I LC R +A LL M+ + I PNL T+ LI F KE
Sbjct: 246 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 305
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A+KL+ M +PD + + C + A ++ ++K P T
Sbjct: 306 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 365
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V + EL M R
Sbjct: 366 NTLIKGFCKSKRVEDGTELFREMSHR 391
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 10/323 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + F+ + L + H + L +E++T RP++ + + YG+ + A
Sbjct: 221 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL-ISCLCSYGRWS---DA 276
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q +M + + ++ NAL+ + + E ++++ + K I+P+ TYN ++
Sbjct: 277 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK-RSIDPDIFTYNSLVN 335
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + M K P+ + L+ GF K + ED ++ + M G+
Sbjct: 336 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 395
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y IQ L + A+ + M+S G+ P++ TY L+ G G LE A ++F
Sbjct: 396 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 455
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + D Y + +C+ G+ + + + KG P+ T ++++GL S
Sbjct: 456 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 515
Query: 371 SKVAEANELIGLMKKR--FPKSG 391
+ EA L+ MK+ P SG
Sbjct: 516 RLLQEAYALLKKMKEDGPLPNSG 538
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 7/263 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK---VYGIEPNSE 183
+D A+ F M K S+ N LL K ++ V + + + V+G+
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY---- 83
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +I FC S ++L +M + P+ LL G+ + D ++ M
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G + I L ++ EA AL+D M+ RG +PNL TY +++G K G+
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A L M E D F LC+ + AL + + KG P+ T SL
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263
Query: 364 VTGLASISKVAEANELIGLMKKR 386
++ L S + ++A++L+ M ++
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEK 286
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 8/312 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ +S +S L ++ SQLL ++ K P+L F+ + ++ A +
Sbjct: 258 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT---FNALIDAFVKEGKFVE-AEK 313
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+++M K + + N+L+ G + ++ K++F EF P+ TYN +IK F
Sbjct: 314 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF-EFMVSKDCFPDVVTYNTLIKGF 372
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+S + EM + + + + L+ G + + ++ KV + M G+ +
Sbjct: 373 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 432
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+I + LC + E+A + D M IK ++ Y +I G K G ++ LF S
Sbjct: 433 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 492
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
++ G +P+ + LC + A + + G +P+ T +L+
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 552
Query: 373 VAEANELIGLMK 384
A + ELI M+
Sbjct: 553 KAASAELIREMR 564
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 89/210 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP+ T + ++ +C S +++ +M RP+ F L+ G + +K +
Sbjct: 112 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 171
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G + Y + + LCK ++ A LL+ M + I+ ++ + +I
Sbjct: 172 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 231
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K +++ A LF M G P+ + LC G + A ++ + K P+
Sbjct: 232 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 291
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K EA +L M KR
Sbjct: 292 LVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S Y +++++ + M + P+ +F LL+ K K++ V + +
Sbjct: 12 SGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGE 71
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M++ I G+ YNI I C+ + A ALL M+ G +P++ T L++G+
Sbjct: 72 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 131
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A L M G PD+ F + L + A+ + + +G P+ T
Sbjct: 132 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 191
Query: 362 SLVTGL 367
+V GL
Sbjct: 192 VVVNGL 197
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Query: 116 HSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI+L G N ++ A++ F+ M K ++ + ++ G + ++ +F
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL- 493
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G++PN TYN +I C Y++L +M+ PN+ + L+ ++
Sbjct: 494 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDK 553
Query: 234 EDVGKVLQMMEKC 246
++++ M C
Sbjct: 554 AASAELIREMRSC 566
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D M +SI + L ++ + ++ + +++ + + I +A +D
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQ-KSEIKLDIYIYTTMIEGMCKAGKVDDGW 487
Query: 132 QTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
F + G++ +V N ++ G +L + Y +K++ + P PNS TYN
Sbjct: 488 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-----PNSGTYNT 542
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+I++ GD ++ ++ EMR +A+ GL+
Sbjct: 543 LIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 578
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
V I G A + A FEE+ + GL A NALL G + + + ++ + I +E +
Sbjct: 295 VAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER 354
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G P+ TY+ +I ++ +G S +L EM +RPN+ F +LA + K++
Sbjct: 355 S-GFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQ 413
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+VL+ M G++ + YN+ I + K + A A D M G++P+ T+ LI
Sbjct: 414 KSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLI 473
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K G+ A++LF +M GC P + + + + +E + ++G +
Sbjct: 474 DCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLL 533
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ T +LV + +A E + +MK S M+NA +
Sbjct: 534 ANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALI 578
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 3/274 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +S+++ Y A + A +EM+ G+R + + +L +++ ++ E
Sbjct: 362 HTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLRE 421
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ G+ P+ YN +I +F + + MR + ++P+A + L+ K
Sbjct: 422 M-RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 480
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ ++ + M++ G + YNI I S + +R E+ K LL M S+G+ N+ TY
Sbjct: 481 HHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYT 540
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ +G+ G + A + M + G +P S + Q G E A+ R A
Sbjct: 541 TLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRAD 600
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P + SL+ + AEA ++ MK+
Sbjct: 601 GLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKE 634
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 2/260 (0%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
Q+L E++ + + F+ I +G+ N +DHA+ TF+ M G++ N L+
Sbjct: 417 QVLREMRNS-GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDC 475
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
S ++ + + +F E + G P + TYN +I SF E V ++L +M+ + +
Sbjct: 476 HCKSGHHNKAEELF-EAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLA 534
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N + L+ + + +++D + L++M+ G+ +YN I + + SE+A
Sbjct: 535 NVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAF 594
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M + G+KP++ LI+ FG++ A + M +PD + L +
Sbjct: 595 RVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRV 654
Query: 336 GEYETALKVCRASMAKGWVP 355
+++ V G P
Sbjct: 655 EKFDKVPAVYEEMTLSGCTP 674
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 5/218 (2%)
Query: 143 RQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES--GDS 198
RQ++ L NAL+ C + + E+ + + + G + Y+ +I+S + DS
Sbjct: 179 RQTLTPLTYNALIGACARNDDLEKALNLMSRMRRD-GFPSDFVNYSFIIQSLTRTNKSDS 237
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
S + I AE+ I + ++ GF K L M++ G++
Sbjct: 238 SMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAV 297
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I +L R+EEA+A+ + + G+ P Y L+ G+ K G+L+ A+ + + M G
Sbjct: 298 ITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGF 357
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
PD + + + G +E+A V + A G P+
Sbjct: 358 SPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPN 395
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P + T VI + +G + +I E++ + P + LL G+ K +D
Sbjct: 286 GLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDA 345
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ ME+ G + + Y++ I + R E A+ +L M + G++PN + ++
Sbjct: 346 ESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILAS 405
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ G + + ++ M N G PD + +
Sbjct: 406 YRDRGKWQKSFQVLREMRNSGVSPDRHFY 434
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 2/182 (1%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
IE + + N +I F +SGD + S LA ++ + P ++ + E+
Sbjct: 252 IELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAE 311
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ + +++ G+ YN ++ K ++A++++ M G P+ TY LI +
Sbjct: 312 AIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAY 371
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP-- 355
G E A+ + M G P+SY F G+++ + +V R G P
Sbjct: 372 ANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDR 431
Query: 356 HF 357
HF
Sbjct: 432 HF 433
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 73/192 (38%), Gaps = 4/192 (2%)
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S +Y +R+++ P + L+ + E ++ M + G S Y
Sbjct: 165 GRSEKLYEAFLLSQRQTLTP--LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNY 222
Query: 256 NIRIQSLCKLKRSEEA--KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+ IQSL + +S+ + + + + S I+ + +I GF K G++ A A +
Sbjct: 223 SFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMV 282
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P + L G E A + G +P +L+ G +
Sbjct: 283 QGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSL 342
Query: 374 AEANELIGLMKK 385
+A ++ M++
Sbjct: 343 KDAESIVSEMER 354
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 154/335 (45%), Gaps = 14/335 (4%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEEL--KTRPDLRQNERF 113
F+ DI G P +A+ + L + S+++ E+ K+ PD
Sbjct: 100 FKFSDIAVGDGSLPHV----LAYKTMLDCLIKTGKTREASEVVGEMIKKSVPDGMT---- 151
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+ I + + N D AM+ F+ M + + ++D +LL ++ + R+F E
Sbjct: 152 YTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMI 211
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G P++ TY +++ C G S Y I + MR + P+ + L+ G +
Sbjct: 212 Q-RGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRI 270
Query: 234 EDVGKVL--QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ KVL +++E +YN+ I+ LC+ + EEA + GM+ +G P L TY
Sbjct: 271 TE-AKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYN 329
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI GF K ++ A +LF M G P++ + F LC+ G+ A + + S+ +
Sbjct: 330 ALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVER 389
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G VP T +L+ GL +++ EA+ L M +R
Sbjct: 390 GCVPDNVTYNALIRGLFGANRMDEAHRLYREMGER 424
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 128/296 (43%), Gaps = 38/296 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ + F+E++ G+ + A NA+L + S +++ + F++ G P+ Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFK-FSDIAVGDGSLPHVLAYK 119
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ ++G + ++ EM +KS+ P+ + L++ K ++ +D KV +M +
Sbjct: 120 TMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEK 178
Query: 247 GIASGVNVYN-----------------------------------IRIQSLCKLKRSEEA 271
I ++VY + ++ LC RS A
Sbjct: 179 EIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLA 238
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG-GCEPDSYCFFMFTY 330
+ M SRG P+ +TY LI+G G + AK LF + G D+ + +
Sbjct: 239 YDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIE 298
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + E AL+V + KG +P T +L+ G ++V +A +L +M+++
Sbjct: 299 GLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEK 354
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 75/167 (44%)
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
+L+ GC ++ E K +F E + ++ YN +I+ C + + A M
Sbjct: 259 SLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVD 318
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
K P + L+ GF+K ++ + ++ ++ME+ G + +Y+ I LCK+ + E
Sbjct: 319 KGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINE 378
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
A + RG P+ TY LI G ++ A +L+ M G
Sbjct: 379 AHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERG 425
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 1/210 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ ++YN +++ + ++L+ M + P+ GLL+ F + + +V
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ Q +E G+A G+ YN +++L + D + G P++ YK ++
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G A ++ M PD + LC+ + A+KV + K VP+
Sbjct: 125 LIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPN 183
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
SL+ K+ A L M +R
Sbjct: 184 LDVYTSLLAAHCRTRKLDGAYRLFVEMIQR 213
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + YN+ ++ L KL ++A+A+L M+ G P++ T L+ F + +
Sbjct: 5 GVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEV 64
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF + + G + L G+++ K ++ G +PH K+++
Sbjct: 65 CELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDC 124
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
L K EA+E++G M K+ G + A +
Sbjct: 125 LIKTGKTREASEVVGEMIKKSVPDGMTYTALI 156
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 143/340 (42%), Gaps = 9/340 (2%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
RL +IL+I G+ P D + +++ +S +A N +L+ + PD
Sbjct: 148 CRLGKTRKAAKILEILEGSGAVP----DVITYNVMISGYCKAGEINNALSVLDRMSVSPD 203
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
+ + S+ G+ + AM+ + M + V L+
Sbjct: 204 VVTYNTI-LRSLCDSGK---LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
++ E + G P+ TYN ++ C+ G L +M +PN ++L
Sbjct: 260 KLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++ D K+L M + G + V +NI I LC+ A +L+ M G +PN
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+Y L+HGF KE ++ A + M + GC PD + LC+ G+ E A+++
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+KG P T +++ GLA K +A +L+ M+ +
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
I + P+ +G +PNS +YN ++ FC+ L M + P+ + +L
Sbjct: 366 ILEKMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K+ K ED ++L + G + + YN I L K ++ +A LLD M ++ +KP+
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY L+ G +EG ++ A K F G P++ F LC+ + + A+
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF 544
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELI------GLMKK 385
+ +G P+ ++ L+ GLA EA EL+ GLMKK
Sbjct: 545 MINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 7/206 (3%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ +G+ + L M P+ L+ GF + K K+L+++E
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V YN+ I CK A ++LD M + P++ TY ++ G L+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A ++ M C PD + + C+ A+K+ +G P T LV
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 366 GLASISKVAEANELIGLMKKRFPKSG 391
G+ ++ EA + + M P SG
Sbjct: 283 GICKEGRLDEAIKFLNDM----PSSG 304
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 139/311 (44%), Gaps = 6/311 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDH 129
P + +++ + A+ +A LL E+ ++ N+R SI+L G + +
Sbjct: 22 PASSVTYNVLIRGFCNASDLDAAFSLLREMDVE-GMQCNDR--TTSIILQGLCRCGRVAQ 78
Query: 130 AMQTFE-EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ F+ ++ + V + L+ G + +F + G PN+ TYN +
Sbjct: 79 ALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNAL 138
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+ + +++ E R++ P+ + L+A ++ + ++ M + G
Sbjct: 139 VDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGY 198
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ +N I LC+ +R +A + + M+ R PNL TY +I G K L+ A++
Sbjct: 199 VPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQ 258
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M + GC PD + G ++AL + R +++G +P T ++ L
Sbjct: 259 LLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLC 318
Query: 369 SISKVAEANEL 379
+ +V +A+E+
Sbjct: 319 KVGRVDDAHEI 329
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 14/307 (4%)
Query: 84 KLSQA-NHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKY 140
+++QA HF+A LE +PD+ ++ ++ G + +D A F +M
Sbjct: 75 RVAQALEHFDAS---LELAHAQPDVVS------YTTLINGLCKLGRVDAAFDLFRKMVAA 125
Query: 141 G-LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G R + NAL+ G + + + TE K P+ TYN ++ + + G
Sbjct: 126 GGCRPNAFTYNALVDGLCKQDRLDAARAVITEARK-RDFAPDVVTYNTLMAALFQLGRVD 184
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ +M + P F ++ G + + D +V M + Y++ I
Sbjct: 185 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVI 244
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
LCK + +EA+ LLD M+S G +P+L Y L+ GF G L+ A L M + GC
Sbjct: 245 DGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI 304
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + + LC+ G + A ++ R +A P+ T +L+ G S+V E ++
Sbjct: 305 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 364
Query: 380 IGLMKKR 386
+ M R
Sbjct: 365 MREMACR 371
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 121/310 (39%), Gaps = 5/310 (1%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM 126
LA P D ++++ ++ L + +A L ++ R N + + + +
Sbjct: 89 LAHAQP-DVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 147
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A E K V N L+ +E FT+ + G P ++N
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTE-EGYVPTLVSFN 206
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C + + + EM + PN + +++ G K + ++ ++L M
Sbjct: 207 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 266
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y + R + A LL M+S+G P++ TY +I K G ++ A
Sbjct: 267 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 326
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++F + C P+ + C+ + KV R + P+ T +++ G
Sbjct: 327 HEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWG 383
Query: 367 LASISKVAEA 376
L+ + + EA
Sbjct: 384 LSMVDRNEEA 393
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 110/280 (39%), Gaps = 40/280 (14%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++ V L + + +A ++ E + R PD+ ++ L+ Q +D A+ TF
Sbjct: 135 YNALVDGLCKQDRLDAARAVITEARKRDFAPDVVT---YNTLMAALF-QLGRVDEALATF 190
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + G ++ + NA++ G ++ + +F E PN TY+ VI C+
Sbjct: 191 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID-RDFHPNLVTYSVVIDGLCK 249
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
S +L M + RP+ + L+ GF + + +L+ M G V
Sbjct: 250 SDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVT 309
Query: 255 YNIRIQSLCKLKRSEEA-------------------KALLDG-------------MLSRG 282
Y + I LCK+ R ++A AL+ G M
Sbjct: 310 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA 369
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+PN+ TY +I G E A +F M+ G PD+
Sbjct: 370 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 409
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
++F+ ++ L +A ++ E+ R D N +S+V+ G +++ +D A Q
Sbjct: 203 VSFNAIITGLCRARRLADALEVFNEMIDR-DFHPN--LVTYSVVIDGLCKSDQLDEAQQL 259
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEE----VKRIFTEFPKVYGIEPNSETYNKVI 189
+ M G R + A L+LG + + ++R+ ++ G P+ TY VI
Sbjct: 260 LDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ-----GCIPDVVTYTVVI 314
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G + I E+ PN + L+ G+ + + ++ GKV++ M
Sbjct: 315 DKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACR 371
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
V YN I L + R+EEA + M G P+ TY+ L
Sbjct: 372 PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415
>gi|255561325|ref|XP_002521673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539064|gb|EEF40660.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 341
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 9/299 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+++ ++KL+QA +F+AI +++ +K R + F + I +YG A I A+ T +
Sbjct: 33 YTLVINKLAQAKNFDAIEDIMQRIKLEKSCRLSNGFFYNVIKIYGHLAGRIKVAIDTLFD 92
Query: 137 MDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M + Y V N +L + ++ ++ V I+ + P + G+E ++ N +IK CE+
Sbjct: 93 MPRGYNCWPDVKTFNLVLNLLVSARIFDVVHEIYEKAP-ILGVEIDACCLNILIKGLCEN 151
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
GD + + +L E ++ +PN F L+ + + +L ME GI +
Sbjct: 152 GDLEAAFYVLDEFPKQRCKPNVRTFSTLMHYLCAKGEVNQAFGLLDRMENEGIEVDTITF 211
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
NI I L K R EE LL M +G +PN +Y+ +++G G AK M
Sbjct: 212 NILISGLRKRGRIEEGMELLVKMKLKGCEPNAGSYQEVLYGLLDAGKFSEAKDFMDRMVC 271
Query: 316 GGCEPDSYCFFMFTYFLCQG---GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G P + LC+ GE + LK + +G+VP K +V + S S
Sbjct: 272 EGNGPSFVSYKKLIDGLCKEKLIGEVDCVLK---QMLKQGFVPKMGMWKHIVGSMLSES 327
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 2/266 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM F M + L + N ++ G K E K +F E K +PNS T++ +I
Sbjct: 148 AMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEM-KGGECKPNSVTFSALI 206
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC++GD + +L EM + + + + L++GF + E ++ M + +
Sbjct: 207 DGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVT 266
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y+ + +LCK ++ +EA +LD M ++P++ Y L G K G A K+
Sbjct: 267 PNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKV 326
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G EP++ + LC+ G + AL + KG P T +LV GL
Sbjct: 327 LDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCG 386
Query: 370 ISKVAEANELIG-LMKKRFPKSGDMW 394
+ K+ EA +L+ LM K F D++
Sbjct: 387 VGKIDEAVDLLNLLMSKEFHIKPDVF 412
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 114/255 (44%), Gaps = 3/255 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ EEM+K GL V +AL+ G + E K +F E + + PN TY+
Sbjct: 215 VEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLR-KNVTPNVVTYS 273
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + C+ +L M +RP+ + +L G K + D KVL +M K
Sbjct: 274 CLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR 333
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G YN I LCK R ++A +L+ M +G KP++ TY L+ G G ++ A
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393
Query: 307 KKLFASMTNG--GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
L + + +PD + F + LC+ A +V + +G+ + T L+
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILI 453
Query: 365 TGLASISKVAEANEL 379
G S K+ +A EL
Sbjct: 454 DGYLSAGKLTKALEL 468
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 110/258 (42%), Gaps = 5/258 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI-FTEFPKVYGIEPNSETYNKV 188
A Q + M +R V A L G LSKN I + G EPN+ TYN +
Sbjct: 288 AAQMLDTMTGCKVRPDVVAYTVLADG--LSKNGRASDAIKVLDLMVKRGEEPNNVTYNAI 345
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--EKC 246
I C+ G IL M +K +P+ + L+ G K ++ +L ++ ++
Sbjct: 346 INGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEF 405
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I V +N+ IQ LCK +R AK + M+ RG N+ TY LI G+ G L A
Sbjct: 406 HIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKA 465
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L+ + G P++ + + LC+ A + A G P S +L+
Sbjct: 466 LELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMAS 525
Query: 367 LASISKVAEANELIGLMK 384
L S V +A L M+
Sbjct: 526 LCRESSVEQARNLFQEMR 543
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 105/240 (43%), Gaps = 3/240 (1%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
S + N L+ +K+Y+ V + ++ V + P + + +I+SF + S + +
Sbjct: 58 SYSSCNTLIDNLRKAKHYDHVISVHSKMASV-SVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGIASGVNVYNIRIQSLC 263
L + ++ N +F LLL GF + + MM++ C I V+ YN I LC
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVS-YNTVINGLC 175
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
K KR EAK L M KPN T+ LI GF K G++E L M G E D +
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ C G+ E ++ + K P+ T L+ L K EA +++ M
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 137/326 (42%), Gaps = 10/326 (3%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
++LD G + P D +A+++ LS+ + ++L+ + R + N ++
Sbjct: 290 QMLDTMTGCKVRP----DVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA- 344
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFP 173
++ G + +D A+ E M K G + V + L+ G C + K E V +
Sbjct: 345 --IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMS 402
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K + I+P+ +N VI+ C+ + M + N + +L+ G+ K
Sbjct: 403 KEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKL 462
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ + GI+ Y + I LCK++ AK L + + G +P + Y L
Sbjct: 463 TKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTL 522
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ +E ++E A+ LF M N +PD F + + G+ E+A ++ +
Sbjct: 523 MASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNL 582
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
VP T L+ + ++ EA L
Sbjct: 583 VPDNITFSILINRFLKLGQLDEAASL 608
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 3/229 (1%)
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
LS++ ++P P+ + N +I + ++ V S+ ++M S+ P
Sbjct: 38 LSESLSHFHHTLQDYPNSI---PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCF 94
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
T L+ F K VL ++ K G V +N+ ++ C+ S +A L
Sbjct: 95 TSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCM 154
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M + P+ +Y +I+G K L AK+LF M G C+P+S F C+ G+
Sbjct: 155 MKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGD 214
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
E + G +L++G S + EL M ++
Sbjct: 215 VEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK 263
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 107/281 (38%), Gaps = 27/281 (9%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A + A++ +++ G+ + L+ G + K +F + + G P
Sbjct: 456 YLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNK-KRASGTRP 514
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
YN ++ S C ++ EMR + P+ F +++ G K E ++L
Sbjct: 515 TVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M + ++I I KL + +EA +L + M+S G P+ + L+ G+ +
Sbjct: 575 LEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLK 634
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG-----WVP 355
G E + M + DS + + + C +M+K +P
Sbjct: 635 GKTEKVVSMLQQMADKDVVLDS--------------KLTSTILACLCNMSKDVDIEKILP 680
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNA 396
FS S+ + NEL+ + K P + ++ A
Sbjct: 681 KFSQH-------TSVGASIKCNELLMKLNKVHPDNANILVA 714
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 108/252 (42%), Gaps = 1/252 (0%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E M G + N L+LG + K Y R ++ G EPN TY +I FC+
Sbjct: 396 ESMLSVGCGPDIFTYNTLILG-LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 454
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G ++L EM K + NA + L++ K+ K +D + M G +
Sbjct: 455 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 514
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+N I LCK+ + EEA L ML G+ N TY LIH F + G ++ A KL M
Sbjct: 515 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 574
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC D + LC+ G E L + M+KG P+ + L+ GL +
Sbjct: 575 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 634
Query: 375 EANELIGLMKKR 386
A E + M R
Sbjct: 635 HALEFLRDMIHR 646
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 134/312 (42%), Gaps = 8/312 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + + KL A F LL ++K + + E + + YG+A + A + +
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMK-QEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 189
Query: 137 M-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M Y + + N +L + + V +F E GI P T+ V+K+ C
Sbjct: 190 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS-KGISPTVYTFGVVMKALCLV 248
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ S ++L +M R PNA + L+ K + +V K+L+ M G VN +
Sbjct: 249 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTF 308
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I LCK+ R EA L+D ML RG PN TY L+HG + G ++ A+ L + N
Sbjct: 309 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 368
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM-AKGWVPHFSTMKSLVTGLASISKVA 374
P+ F G + A V SM + G P T +L+ GL +
Sbjct: 369 ----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 424
Query: 375 EANELIGLMKKR 386
A EL+ M+ +
Sbjct: 425 SARELMNEMQIK 436
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 1/217 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE + + E G+ N+ YN +I + C+ ++ +M K +P+ F
Sbjct: 459 EEARNVLDEMSG-KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K +K+E+ + Q M G+ + YN I + + +EA L++ ML RG
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ TY LI + GN+E LF M + G P++ + LC+ G + AL
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 637
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ R + +G P T SL+ GL + EA L
Sbjct: 638 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 674
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 129/310 (41%), Gaps = 16/310 (5%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQ-NERFHVHSIVLYGQANM--IDHAMQTFEEM 137
A+SK+ + N + + + + PD+ N+ H G M I A + + M
Sbjct: 279 ALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH-------GLCKMLRIHEAAKLVDRM 331
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
G + L+ G +E + + + P PN +N +I + G
Sbjct: 332 LLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-----PNVVLFNTLINGYVSRGR 386
Query: 198 SSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+++ E M P+ + L+ G K+ +++ M+ G V Y
Sbjct: 387 LDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYT 446
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I CK R EEA+ +LD M +G+ N Y LI K+ ++ A +F M++
Sbjct: 447 ILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 506
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
GC+PD + F + LC+ ++E AL + + + +G + + T +L+ + EA
Sbjct: 507 GCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEA 566
Query: 377 NELIGLMKKR 386
+L+ M R
Sbjct: 567 LKLVNDMLFR 576
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 127/296 (42%), Gaps = 10/296 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + L + + + +L+ E++ + N + I + + ++ A
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIK-GCEPNVITYTILIDRFCKEGRLEEARNV 464
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSK--NYEEVKRIFTEFPKVY--GIEPNSETYNKVI 189
+EM GL ALNA+ C++S E+V+ F + G +P+ T+N +I
Sbjct: 465 LDEMSGKGL-----ALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 519
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ + +M + + N + L+ F + ++ K++ M G
Sbjct: 520 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 579
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I++LC+ E+ AL + M+S+G+ PN + LI+G + GN++ A +
Sbjct: 580 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 639
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
M + G PD + LC+ G + AL + +G P T +L++
Sbjct: 640 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 695
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ F +M G + + N+L+ G +EE ++ + + G+ N+ TYN
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM-LLEGVIANTITYN 551
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F G ++ +M + + + L+ + E + + M
Sbjct: 552 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 611
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ NI I LC+ + A L M+ RG+ P++ TY LI+G K G + A
Sbjct: 612 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 671
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
LF + G PD+ + + C+ G ++ A + + G++P+ T LV+
Sbjct: 672 LNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 730
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR-- 104
RL+ N +LD G LA L+ + ++ +S L + + ++ ++
Sbjct: 456 GRLEEARN---VLDEMSGKGLA----LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 508
Query: 105 -PDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
PD+ F +S++ + N + A+ +++M G+ + N L+ +
Sbjct: 509 KPDI-----FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 563
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E ++ + G + TYN +IK+ C +G+ ++ +M K + PN +
Sbjct: 564 QEALKLVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G + + + L+ M G+ + YN I LCK R++EA L D + G
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
I P+ TY LI KEG + A L + + G P+ +++ + G+ E
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 5/207 (2%)
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+ Y +I +G+ + ++L +M+++ I + F L++ + + ++L
Sbjct: 130 DVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 189
Query: 243 MEKCGIAS---GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M G+ S YN+ + L + + MLS+GI P + T+ ++
Sbjct: 190 MR--GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCL 247
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
++ A L MT GC P++ + + L + G LK+ + G +P +T
Sbjct: 248 VNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNT 307
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+ GL + ++ EA +L+ M R
Sbjct: 308 FNDAIHGLCKMLRIHEAAKLVDRMLLR 334
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
V A AL+ GC + E +R+F E P + G+ PN TY ++ + G +++
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMP-LLGLAPNEVTYTALMHGYFTHGQREKGFAL 95
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
EMRR + PN + L+ + + ++E + M GI V YN I LC+
Sbjct: 96 FEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCR 155
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ +A LLD M + G +P++ T+ L+ G+GK G + A F M G +P +
Sbjct: 156 HGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVT 215
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ M C+ + A + +G P T L+ A + + +A E++ M+
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGME 275
Query: 385 K 385
K
Sbjct: 276 K 276
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 4/272 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H +GQ + FEEM + G+ ++ N L+ + +E + +F E P
Sbjct: 80 MHGYFTHGQR---EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP- 135
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V GI N +YN +I C G +L MR + RP+ F LL+ G+ K K
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ M+ G YN+ I C+ + A L M RG++P TY LI
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F +E ++ A ++ A M G E D++ + + LC G + A K+ ++ KG
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P ++ G +A +LI M+++
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 2/257 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++ + + + F L +E+ R +R ++ L + D A + + M
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD-AAKLLDMM 169
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
G R S+ N L+ G + F + K G +P++ TYN +I FC + D
Sbjct: 170 RTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM-KAAGFQPSAVTYNMLIAGFCRARD 228
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ L++M+ + + P + +L+ F +E+ ++L MEK G+ + Y +
Sbjct: 229 MTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGV 288
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+++LC ++A+ L M +G++P+ Y +I+G+G+EG+ A KL M G
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKG 348
Query: 318 CEPDSYCFFMFTYFLCQ 334
P+S + + LC+
Sbjct: 349 LIPNSASYGLTIRVLCK 365
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+ GD + + EM + PN + L+ G++ + E + + M + G
Sbjct: 44 LVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGG 103
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + YN I C+ E A++L D M RGI N+ +Y LI G + G L A
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA 163
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KL M G P F + + G+ AL A G+ P T L+ G
Sbjct: 164 KLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGF 223
Query: 368 ASISKVAEANELIGLMKKR 386
+ AN + MK+R
Sbjct: 224 CRARDMTRANRALSDMKER 242
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 2/289 (0%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
L+E ++++P N + I Y +A+MI+ A + F++M+K G+ +V LN L+ G
Sbjct: 402 LVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGM 461
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
F E + G++ N+ TY +I++FC + + EM P+
Sbjct: 462 CKHGRINGAVEFFNEM-QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPD 520
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
A + L++G + K + VL M++ G + + +N+ I C+ + +EA +L
Sbjct: 521 AIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLK 580
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M + GIKP+ TY LI F K G+ A +L M G P + + C G
Sbjct: 581 EMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNG 640
Query: 337 EYETALKVCRASMAKGWVPHFSTMKS-LVTGLASISKVAEANELIGLMK 384
+ A+K+ R + VP + + + L+ L ++V A L+ MK
Sbjct: 641 NLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMK 689
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 2/216 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
QA +D A +M + G + + N L+ G +E + E GI+P+
Sbjct: 533 QAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENA-GIKPDG 591
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I F ++GD S+ + ++ +M ++ + P +G L+ + ++ K+ +
Sbjct: 592 VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651
Query: 243 MEKCG-IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + +YNI I SLC+ + + A +L+D M +G+KPN +T+ + G ++
Sbjct: 652 MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
L A +L MT C PD + T +L GE
Sbjct: 712 WLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 135/320 (42%), Gaps = 28/320 (8%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-------QANMIDHAMQTF 134
++ L +A F ++ LL E+K D++ N +V +G + +D A++ F
Sbjct: 312 LTALGRAREFKRMNTLLAEMKEM-DIQPN-------VVTFGILINHLCKFRRVDEALEVF 363
Query: 135 EEMDK-----YGLRQSVDALNALLLGCILSKNYEE----VKRIFTEFPKVYGIEPNSETY 185
E+M+ + + V N L+ G EE V+R+ ++ P+ PN+ TY
Sbjct: 364 EKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQ-PRCM---PNTVTY 419
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I +C++ + + +M + + PN L+ G K + + M+
Sbjct: 420 NCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQG 479
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y I++ C + E+A L D ML G P+ Y LI G + G L+
Sbjct: 480 KGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDR 539
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A + + M G PD F + C+ + + A ++ + G P T +L++
Sbjct: 540 ASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLIS 599
Query: 366 GLASISKVAEANELIGLMKK 385
+ + A+ L+ M K
Sbjct: 600 HFSKTGDFSTAHRLMKKMVK 619
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 7/244 (2%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE+ + ++F + + + PNS ++I C SG + + +L + + A
Sbjct: 252 EEIVGLVSKFAE-HEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNA 310
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL---LDGML 279
LL + +++ + +L M++ I V + I I LCK +R +EA + ++G
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370
Query: 280 SRG--IKPNLDTYKHLIHGFGKEGNLEGAKKLFASM-TNGGCEPDSYCFFMFTYFLCQGG 336
S G ++P++ TY LI G K G E L M + C P++ + C+
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNA 396
E A ++ G P+ T+ +LV G+ ++ A E M+ + K +
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490
Query: 397 ALPR 400
AL R
Sbjct: 491 ALIR 494
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMI 127
SP D ++F++ ++ + N + ++L+E++ +PD H + +
Sbjct: 553 SP-DIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISH----FSKTGDF 607
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A + ++M K GL +V AL+ L+ N +E +IF + + PN+ YN
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNI 667
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I S C S++ +M+ K ++PN F + G +++ + K ++M++
Sbjct: 668 LINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNW---LSKAFELMDR 722
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 108/252 (42%), Gaps = 1/252 (0%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E M G + N L+LG + K Y R ++ G EPN TY +I FC+
Sbjct: 378 ESMLSVGCGPDIFTYNTLILG-LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 436
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G ++L EM K + NA + L++ K+ K +D + M G +
Sbjct: 437 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 496
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+N I LCK+ + EEA L ML G+ N TY LIH F + G ++ A KL M
Sbjct: 497 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 556
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC D + LC+ G E L + M+KG P+ + L+ GL +
Sbjct: 557 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 616
Query: 375 EANELIGLMKKR 386
A E + M R
Sbjct: 617 HALEFLRDMIHR 628
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 8/310 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + + KL A F I LL ++K + + E + + YG+A + A + +
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMK-QEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 171
Query: 137 M-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M Y + + N +L + + V +F E GI P T+ V+K+ C
Sbjct: 172 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLS-KGISPTVYTFGVVMKALCLV 230
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ S ++L +M R PNA + L+ K + +V K+L+ M G VN +
Sbjct: 231 NEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTF 290
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I LCK+ R EA L+D ML RG PN TY L+HG + G ++ A+ L + N
Sbjct: 291 NDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 350
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM-AKGWVPHFSTMKSLVTGLASISKVA 374
P+ F G + A V SM + G P T +L+ GL +
Sbjct: 351 ----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLV 406
Query: 375 EANELIGLMK 384
A EL+ M+
Sbjct: 407 SARELMNEMQ 416
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 1/217 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE + + E G+ N+ YN +I + C+ ++ +M K +P+ F
Sbjct: 441 EEARNVLDEMSG-KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K +K+E+ + Q M G+ + YN I + + +EA L++ ML RG
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ TY LI + GN+E LF M + G P++ + LC+ G + AL
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 619
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ R + +G P T SL+ GL + EA L
Sbjct: 620 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNL 656
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 6/261 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + + M G + L+ G +E + + + P PN +N
Sbjct: 303 IHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-----PNVVLFN 357
Query: 187 KVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I + G +++ E M P+ + L+ G K+ +++ M+
Sbjct: 358 TLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQI 417
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y I I CK R EEA+ +LD M +G+ N Y LI K+ ++
Sbjct: 418 KGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQD 477
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +F M++ GC+PD + F + LC+ ++E AL + + + +G + + T +L+
Sbjct: 478 ALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIH 537
Query: 366 GLASISKVAEANELIGLMKKR 386
+ EA +L+ M R
Sbjct: 538 AFLRRGAMQEALKLVNDMLFR 558
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ T+N I C+ ++ M + PN+ +G+L+ G + K ++
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL-DGMLSRGIKPNLDTYKHLIH 295
+L + V ++N I R +EAKA++ + MLS G P++ TY LI
Sbjct: 342 RMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLIL 397
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G K+G L A++L M GCEP+ + + C+ G E A V KG
Sbjct: 398 GLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLAL 457
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ L++ L KV +A + G M +
Sbjct: 458 NAVGYNCLISALCKDEKVQDALNMFGDMSSK 488
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ F +M G + + N+L+ G +EE ++ + + G+ N+ TYN
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM-LLEGVIANTITYN 533
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F G ++ +M + + + L+ + E + + M
Sbjct: 534 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 593
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ NI I LC+ + A L M+ RG+ P++ TY LI+G K G + A
Sbjct: 594 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 653
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
LF + G PD+ + + C+ G ++ A + + G++P+ T LV+
Sbjct: 654 LNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 712
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 127/296 (42%), Gaps = 10/296 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + L + + + +L+ E++ + N + I + + ++ A
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIK-GCEPNVITYTILIDRFCKEGRLEEARNV 446
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSK--NYEEVKRIFTEFPKVY--GIEPNSETYNKVI 189
+EM GL ALNA+ C++S E+V+ F + G +P+ T+N +I
Sbjct: 447 LDEMSGKGL-----ALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 501
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ + +M + + N + L+ F + ++ K++ M G
Sbjct: 502 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 561
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I++LC+ E+ AL + M+S+G+ PN + LI+G + GN++ A +
Sbjct: 562 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 621
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
M + G PD + LC+ G + AL + +G P T +L++
Sbjct: 622 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR-- 104
RL+ N +LD G LA L+ + ++ +S L + + ++ ++
Sbjct: 438 GRLEEARN---VLDEMSGKGLA----LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 490
Query: 105 -PDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
PD+ F +S++ + N + A+ +++M G+ + N L+ +
Sbjct: 491 KPDI-----FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 545
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E ++ + G + TYN +IK+ C +G+ ++ +M K + PN +
Sbjct: 546 QEALKLVNDM-LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 604
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G + + + L+ M G+ + YN I LCK R++EA L D + G
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
I P+ TY LI KEG + A L + + G P+ +++ + G+ E
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 89/207 (42%), Gaps = 5/207 (2%)
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+ Y +I +G+ ++ ++L +M+++ I + F L++ + + ++L
Sbjct: 112 DVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 171
Query: 243 MEKCGIAS---GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M G+ S YN+ + L + + MLS+GI P + T+ ++
Sbjct: 172 MR--GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCL 229
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
++ A L MT GC P++ + + L + G LK+ + G +P +T
Sbjct: 230 VNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNT 289
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+ GL + ++ EA +L+ M R
Sbjct: 290 FNDAIHGLCKMLRIHEAAKLVDRMLLR 316
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 37/301 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + A++ EEM+ GL ++ A +A++ C + E R E + G+ P
Sbjct: 228 YCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM-DCYCGMGWTEDARRILESLQRKGLSP 286
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGKV 239
N TY ++K +C+ G ++ EM+ I + +G+++ G+ + + +D +V
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M GI + VYN I LCKL R EE + +L M G++P+ +Y LI G+ +
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCR 406
Query: 300 EGNL-----------------------------------EGAKKLFASMTNGGCEPDSYC 324
EG++ + A +L+ M G P+
Sbjct: 407 EGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEIS 466
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
L + G+ E AL + + ++A+G + T +++ GL I ++AEA EL+ MK
Sbjct: 467 CSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMK 526
Query: 385 K 385
+
Sbjct: 527 E 527
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 141/330 (42%), Gaps = 5/330 (1%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
RIL+ L+P + + +++ V + ++++E+K D+ +E +
Sbjct: 274 RILESLQRKGLSP----NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGM 329
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
I Y Q +D A + EM G+ ++ N ++ G EEV+++ E V
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDV- 388
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +YN +I +C G + + M R + + LL GF H +D
Sbjct: 389 GMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDA 448
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ +M K G+A + + L K ++E+A L L+RG+ N+ T+ +I+G
Sbjct: 449 LRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVING 508
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G + A++L M C PDS + C+ G+ TA + G+ P
Sbjct: 509 LCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
S +TG + + N++ M R
Sbjct: 569 VEMFNSFITGHFIAKQWHKVNDIHSEMSAR 598
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 3/209 (1%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+++++G ++ I A FE + ++L+ GC S + +E + +
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSL-RDVML 762
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ PN TYN +I C+SG S ++ +++ K I PN + L+ + KE K
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTT 822
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ K+ Q M + GI V Y+I I LC EEA LLD M+ + PN TY LI
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLI 882
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
HG+ K GN+E KL+ M G P ++
Sbjct: 883 HGYIKSGNMEEISKLYDEMHIRGLLPTNW 911
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 18/260 (6%)
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET--YNKVIKSFCESGDSSSVYSILAEMR 209
++ GC +S E+ +I + P+S +N +I C+SG + S+ +R
Sbjct: 670 MIPGCSIST--IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLR 727
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K P+ + L+ G ++ + +M G+ + YN I LCK +
Sbjct: 728 NKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
A L + + S+GI PN TY LI + KEG A KL M G +P + +
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILI 847
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG------LASISKVAEANELIGLM 383
Y LC G E A+K+ + P++ T +L+ G + ISK+ + + GL+
Sbjct: 848 YGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLL 907
Query: 384 --------KKRFPKSGDMWN 395
K+ P + WN
Sbjct: 908 PTNWIGNWKRSDPVVVNNWN 927
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 2/210 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A++ + M K G+ + + + LL G + E+ ++ E G+ N T+N
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKE-TLARGLAKNVITFN 503
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+ G + +L M+ P++ + L G+ K + ++ ME
Sbjct: 504 TVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHL 563
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A V ++N I K+ + + M +RG+ PNL TY LI G+ KEGNL A
Sbjct: 564 GFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 307 KKLFASMTNGGCEPDSY-CFFMFTYFLCQG 335
L+ M N G P+ + C + + F +G
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKEG 653
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 100/218 (45%), Gaps = 2/218 (0%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F KV G P+ + N+++ +SGD + +MR + P+ ++ +
Sbjct: 170 VFDGMGKV-GCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAY 228
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
++ + + ++ ME G+ + Y+ + C + +E+A+ +L+ + +G+ PN+
Sbjct: 229 CRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNV 288
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMT-NGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
TY L+ G+ K+G +E A+++ M G D + M CQ G + A +V
Sbjct: 289 VTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRN 348
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G + +++ GL + ++ E +++ M+
Sbjct: 349 EMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 99/236 (41%), Gaps = 10/236 (4%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDAL-NALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
+ + I H + T + G S + + N ++ G S + K +F E + P+
Sbjct: 680 EIDKISHVVDTIAD----GNPHSANVMWNVIIFGLCKSGRIADAKSLF-ESLRNKRFLPD 734
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY+ +I SG +S+ M + PN + L+ G K K +
Sbjct: 735 NFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFN 794
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
++ GI+ YN I CK ++ EA L M+ GI+P + TY LI+G +G
Sbjct: 795 KLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQG 854
Query: 302 NLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+E A KL M +P+ +YC + Y + G E K+ +G +P
Sbjct: 855 YMEEAIKLLDQMIENNVDPNYITYCTLIHGYI--KSGNMEEISKLYDEMHIRGLLP 908
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 108/252 (42%), Gaps = 1/252 (0%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E M G + N L+LG + K Y R ++ G EPN TY +I FC+
Sbjct: 3 ESMLSVGCGPDIFTYNTLILG-LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 61
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G ++L EM K + NA + L++ K+ K +D + M G +
Sbjct: 62 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+N I LCK+ + EEA L ML G+ N TY LIH F + G ++ A KL M
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC D + LC+ G E L + M+KG P+ + L+ GL +
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241
Query: 375 EANELIGLMKKR 386
A E + M R
Sbjct: 242 HALEFLRDMIHR 253
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 1/214 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE + + E G+ N+ YN +I + C+ ++ +M K +P+ F
Sbjct: 66 EEARNVLDEMSG-KGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K +K+E+ + Q M G+ + YN I + + +EA L++ ML RG
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ TY LI + GN+E LF M + G P++ + LC+ G + AL
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHAL 244
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ R + +G P T SL+ GL + EA
Sbjct: 245 EFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 278
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 127/296 (42%), Gaps = 10/296 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + L + + + +L+ E++ + N + I + + ++ A
Sbjct: 13 DIFTYNTLILGLCKKGYLVSARELMNEMQIKG-CEPNVITYTILIDRFCKEGRLEEARNV 71
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSK--NYEEVKRIFTEFPKVY--GIEPNSETYNKVI 189
+EM GL ALNA+ C++S E+V+ F + G +P+ T+N +I
Sbjct: 72 LDEMSGKGL-----ALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 126
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ + +M + + N + L+ F + ++ K++ M G
Sbjct: 127 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 186
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I++LC+ E+ AL + M+S+G+ PN + LI+G + GN++ A +
Sbjct: 187 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 246
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
M + G PD + LC+ G + AL + +G P T +L++
Sbjct: 247 LRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ F +M G + + N+L+ G +EE ++ + + G+ N+ TYN
Sbjct: 100 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML-LEGVIANTITYN 158
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F G ++ +M + + + L+ + E + + M
Sbjct: 159 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 218
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ NI I LC+ + A L M+ RG+ P++ TY LI+G K G + A
Sbjct: 219 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 278
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
LF + G PD+ + + C+ G ++ A + + G++P+ T LV+
Sbjct: 279 LNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVS 337
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR-- 104
RL+ N +LD G LA L+ + ++ +S L + + ++ ++
Sbjct: 63 GRLEEARN---VLDEMSGKGLA----LNAVGYNCLISALCKDEKVQDALNMFGDMSSKGC 115
Query: 105 -PDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
PD+ F +S++ + N + A+ +++M G+ + N L+ +
Sbjct: 116 KPDI-----FTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 170
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E ++ + G + TYN +IK+ C +G+ ++ +M K + PN +
Sbjct: 171 QEALKLVNDML-FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 229
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G + + + L+ M G+ + YN I LCK R++EA L D + G
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 289
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
I P+ TY LI KEG + A L + + G P+ +++ + G+ E
Sbjct: 290 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V A AL+ GC + E +R+F E P + G+ PN TY ++ + G +++
Sbjct: 38 VTACTALVNGCCKGGDVAEARRVFDEMP-LLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
EMRR + PN + L+ + + ++E + M GI V YN I LC+
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ +A LLD M + G +P++ T+ L+ G+GK G + A F M G +P + +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
M C+ + A + +G P T L+ A + + +A E++ M+K
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 4/272 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H +GQ + FEEM + G+ ++ N L+ + +E + +F E P
Sbjct: 80 MHGYFTHGQR---EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP- 135
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V GI N +YN +I C G +L MR + RP+ F LL+ G+ K K
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ M+ G YN+ I C+ + A L M RG++P TY LI
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F +E ++ A ++ A M G E D++ + + LC G + A K+ ++ KG
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P ++ G +A +LI M+++
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 117/257 (45%), Gaps = 2/257 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++ + + + F L +E+ R +R ++ L + D A + + M
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD-AAKLLDMM 169
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
G R S+ N L+ G + F + K G +P++ TYN +I FC + D
Sbjct: 170 RTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQM-KAAGFQPSAVTYNMLIAGFCRARD 228
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ L++M+ + + P + +L+ F +E+ ++L MEK G+ + Y +
Sbjct: 229 MTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGV 288
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+++LC ++A+ L M +G++P+ Y +I+G+G+EG+ A KL M G
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKG 348
Query: 318 CEPDSYCFFMFTYFLCQ 334
P+S + + LC+
Sbjct: 349 LIPNSASYGLTIRVLCK 365
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+ GD + + EM + PN + L+ G++ + E + + M + G
Sbjct: 44 LVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGG 103
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + YN I C+ E A++L D M RGI N+ +Y LI G + G L A
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA 163
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KL M G P F + + G+ AL A G+ P T L+ G
Sbjct: 164 KLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGF 223
Query: 368 ASISKVAEANELIGLMKKR 386
+ AN + MK+R
Sbjct: 224 CRARDMTRANRALSDMKER 242
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 3/261 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-GIEPNSETY 185
+D A+ +M K G++ N L+ G +E +F E V+ G EPN +Y
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM--VWSGHEPNVISY 204
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI C++G++ + +M + +PN + ++ K+ + + L M
Sbjct: 205 NTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVD 264
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
GI V YN + C L + EA L M+ R + P+ T+ L+ G KEG +
Sbjct: 265 RGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSE 324
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A+ + +MT G EP++Y + C + + A+KV + KG P+ S+ L+
Sbjct: 325 ARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN 384
Query: 366 GLASISKVAEANELIGLMKKR 386
G ++ EA L+ M ++
Sbjct: 385 GYCKSKRMNEAKRLLSEMSEK 405
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 113/254 (44%), Gaps = 1/254 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+++ A++ EM G+ V N +L G E R+F E + P++ T+
Sbjct: 251 LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVG-RNVMPDTVTF 309
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ C+ G S + M K PNA + L+ G+ ++ ++ KVL +M
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIG 369
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G A ++ YNI I CK KR EAK LL M + + P+ TY L+ G + G
Sbjct: 370 KGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPRE 429
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF M + G PD + + C+ G + ALK+ + + P+ L+
Sbjct: 430 ALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIR 489
Query: 366 GLASISKVAEANEL 379
G+ K+ A EL
Sbjct: 490 GMFIAGKLEVAKEL 503
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 142/318 (44%), Gaps = 5/318 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D + ++ + N ++L +E+ R + F++ L + M+ A
Sbjct: 268 PPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEG-MVSEAR 326
Query: 132 QTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
E M + G + NAL+ G C+ ++ E +K + K G PN +YN +I
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGK--GCAPNLSSYNILIN 384
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C+S + +L+EM K++ P+ + L+ G + + + + + M G+
Sbjct: 385 GYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLP 444
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ Y+I + CK +EA LL M R IKPN+ Y LI G G LE AK+LF
Sbjct: 445 DLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELF 504
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ ++ G PD + + + L + G + A + R G++P + ++ G
Sbjct: 505 SKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQN 564
Query: 371 SKVAEANELIG-LMKKRF 387
+ A +LI ++ KRF
Sbjct: 565 QDSSTAIQLIDEMVGKRF 582
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 113/257 (43%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F +M++ + +V N ++ + E +E GI P+ TYN ++
Sbjct: 220 AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVD-RGIPPDVVTYNTIL 278
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G + + EM +++ P+ F +L+ G KE + V + M + G
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + C + +EA +L M+ +G PNL +Y LI+G+ K + AK+L
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ M+ PD+ + LCQ G AL + + + G +P L+ G
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCK 458
Query: 370 ISKVAEANELIGLMKKR 386
+ EA +L+ M +R
Sbjct: 459 HGHLDEALKLLKEMHER 475
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 125/307 (40%), Gaps = 8/307 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ ++ + L + N + L E+ R PD+ +H GQ N A +
Sbjct: 237 VTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTI-LHGFCSLGQLN---EATR 292
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+EM + N L+ G E R +E G EPN+ TYN ++ +
Sbjct: 293 LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEA-RCVSETMTEKGAEPNAYTYNALMDGY 351
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C +L M K PN + + +L+ G+ K + + ++L M + +
Sbjct: 352 CLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDT 411
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+ +Q LC++ R EA L M S G+ P+L Y L+ GF K G+L+ A KL
Sbjct: 412 VTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M +P+ + + + G+ E A ++ A G P T ++ GL
Sbjct: 472 MHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGL 531
Query: 373 VAEANEL 379
EA E
Sbjct: 532 SDEAYEF 538
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 1/244 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y N +D A++ M G ++ + N L+ G SK E KR+ +E + + P
Sbjct: 351 YCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE-KNLTP 409
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TY+ +++ C+ G ++ EM + P+ + +LL GF K ++ K+L
Sbjct: 410 DTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLL 469
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + I + +Y I I+ + + E AK L + + GI+P++ TY +I G KE
Sbjct: 470 KEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKE 529
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A + F M + G PDS + + Q + TA+++ + K + ST
Sbjct: 530 GLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTF 589
Query: 361 KSLV 364
+ L+
Sbjct: 590 QMLL 593
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 1/192 (0%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M R + RP+ +FG L K+ +Y + M+ G+ V N+ I LC+L
Sbjct: 87 MVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSH 146
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+ A +++ M GI+P+ T+ LI+G EG ++ A LF M G EP+ +
Sbjct: 147 VDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNT 206
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
LC+ G A++V R P+ T +++ L V EA E + M R
Sbjct: 207 VINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRG 266
Query: 387 FPKSGDMWNAAL 398
P +N L
Sbjct: 267 IPPDVVTYNTIL 278
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 100/250 (40%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ +F M + R SV L K Y + + ++G+ N + N
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQM-DLFGVTHNVYSLN 135
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C S++ +M + I+P+A F L+ G E K ++ + M
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN I LCK + A + M KPN+ TY +I K+ + A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + M + G PD + + C G+ A ++ + + + +P T LV G
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315
Query: 367 LASISKVAEA 376
L V+EA
Sbjct: 316 LCKEGMVSEA 325
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ + K + S + SS S+ +M + N +L+ + + V
Sbjct: 94 PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M K GI +N I LC + +EA L + M+ G +PN+ +Y +I+G K
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
GN A ++F M +P+ + LC+ A++ + +G P T
Sbjct: 214 NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+++ G S+ ++ EA L M R
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGR 300
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 156/335 (46%), Gaps = 20/335 (5%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +S+ V L +A + LL+E+ R PD+ +++ +L G ++ +D A
Sbjct: 172 ITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV------IMYNTLLNGLCKSRRLDEA 225
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ + M + G +V N+L+ SK + R+ + G P+ YN VI
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSE-RGCPPDVINYNTVIA 284
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH------KYEDVGKVLQMME 244
C ++L +M P+ + ++ G K+ K E ++L+MM+
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G Y + I+ LC+ ++S++A ALL M+ + P+L ++ +I K +L+
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A K+F M+ C+P+ + L +GGE + A++V M + + P +T S++
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL-MVESFRPGVATYNSVL 463
Query: 365 TGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
GL + ++ EA ++ G++ K G + A +
Sbjct: 464 DGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 17/315 (5%)
Query: 82 VSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEE 136
+ L +A + +LL+E++ R P + VH+ V+ G +A A+ F+
Sbjct: 37 IHGLCKAGKLDQAYELLDEMRDRGIPPGV------AVHNGVIRGLCKAGRFGDALGYFKT 90
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+ + N L+ + S EE +IF PN TY VI C+ G
Sbjct: 91 VAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDG 150
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+L M PN + +L+ G K + + +LQ M + G V +YN
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ LCK +R +EA L+ M+ G P + TY L+ F + ++ A +L M+
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA------SI 370
GC PD + LC+ + A + + +A VP T +++ GL +
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Query: 371 SKVAEANELIGLMKK 385
K+ A E++ +MK+
Sbjct: 331 WKLEAACEILEMMKQ 345
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY +I C++G Y +L EMR + I P ++ G K ++ D
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFG 298
+ + + +NI + +L K R EEA + + M S PN+ TY +I+G
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K+G L+ A +L M GC P+ + + LC+ G + + + +G+ P
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 359 TMKSLVTGLASISKVAEANELIGLM 383
+L+ GL ++ EA EL+ LM
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLM 232
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P +N VI+ C++G + P+ F +L+ K + E+
Sbjct: 60 GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 237 GKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ + M V Y I LCK + + A LLD M G PN+ TY L+
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G K G + L MT G +PD + LC+ + AL++ + + G P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ +V A LI +M +R
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
R + PN +G L+ G K K + ++L M GI GV V+N I+ LCK R
Sbjct: 22 REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRF 81
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM-TNGGCEPDSYCFFM 327
+A + P++ T+ L+ K G +E A ++F SM T+ C P+ +
Sbjct: 82 GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
LC+ G+ + A+++ G P+ T LV GL + + L+ M +R
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201
Query: 387 FPKSGDMWNAAL 398
F M+N L
Sbjct: 202 FQPDVIMYNTLL 213
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ +++ VI S C+S D + Y I M + +PN + L+ G K + +
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V ++M + GV YN + LC + R EEA +++GM+ + P+ +Y LI G
Sbjct: 443 RVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 298 GKEGNLEGAKKLFASMTNGG 317
+ +E A +LF ++ G
Sbjct: 502 CRVSCVEEAYELFQAVEAKG 521
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 87/207 (42%), Gaps = 1/207 (0%)
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E K G PN+ TY VI+ C + S ++L M + P+ + F +++ K
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
H + K+ MM + Y I L K ++A + + M+ +P + TY
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVE-SFRPGVATY 459
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
++ G G +E A ++ M + C PD + LC+ E A ++ +A A
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEA 519
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEAN 377
KG+ LV L ++++A+
Sbjct: 520 KGFAMEVGVYNVLVNELCKKKRLSDAH 546
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F M + + + A AL+ G LSK E K + V P TYN
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDG--LSKGGEVDKAVRVFELMVESFRPGVATYN 460
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ C G ++ M K P+ +G L+ G + E+ ++ Q +E
Sbjct: 461 SVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G A V VYN+ + LCK KR +A + + ++ G K
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 142/311 (45%), Gaps = 1/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +++ + + + ++L ++ L +ER + I Y + ID A++ +
Sbjct: 297 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 356
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + GL+ ++ N+L+ G E + + T + ++P+S +YN ++ +C
Sbjct: 357 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD-WNLKPDSYSYNTLLDGYCRE 415
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +S +++ +M ++ I P + LL G + ++D ++ +M K G+A Y
Sbjct: 416 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 475
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ + L K++ E A L +L+RG + T+ +I G K G + A+++F M +
Sbjct: 476 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 535
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC PD + C+ A KV A + P SL++GL ++ E
Sbjct: 536 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE 595
Query: 376 ANELIGLMKKR 386
+L+ M R
Sbjct: 596 VTDLLTEMGIR 606
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+EPN TY+ +I + GD + +L M K + N + LL+ G+ K+ K ++
Sbjct: 256 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 315
Query: 237 GKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
KVL+ M E+ + Y + I C+ + ++A LLD ML G+K NL LI+
Sbjct: 316 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 375
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+ K G + A+ + M + +PDSY + C+ G A +C + +G P
Sbjct: 376 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 435
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ GL + +A ++ LM KR
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 466
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 6/288 (2%)
Query: 98 LEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
+E L P++ HS++ Y ++ A + M + G+ ++V L+ G
Sbjct: 252 MENLGVEPNI-----VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 306
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+E +++ + + P+ Y +I +C +G +L EM R ++ N
Sbjct: 307 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 366
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
L+ G+ K + + V+ M + YN + C+ + EA L D
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCD 426
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
ML GI+P + TY L+ G + G + A +++ M G PD + L +
Sbjct: 427 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 486
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+E A + + +A+G+ T ++++GL + K+ EA E+ MK
Sbjct: 487 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 150/380 (39%), Gaps = 73/380 (19%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQ 132
R+ F+ +S L + ++ +++K DL + + ++ Y +A+ + A +
Sbjct: 507 RITFNTMISGLCKMGKMVEAEEIFDKMK---DLGCSPDGITYRTLIDGYCKASNVGQAFK 563
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M++ + S++ N+L+ G S+ EV + TE + G+ PN TY +I +
Sbjct: 564 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM-GIRGLTPNIVTYGALIDGW 622
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--------E 244
C+ G +S EM + N +++G Y+ + ++ ++Q M
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682
Query: 245 KCGIASGVN------------------------VYNIRIQSLCKLKRSEEAKA------- 273
+C + S + VYNI I LCK + ++A+
Sbjct: 683 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 742
Query: 274 ----------------------------LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
L D ML RG+ PN+ TY LI+G K N++
Sbjct: 743 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 802
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++LF + G P+ + C+ G + A K+ + +G P T +L+
Sbjct: 803 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862
Query: 366 GLASISKVAEANELIGLMKK 385
GL + + +L+ M K
Sbjct: 863 GLCKHGDIERSMKLLNQMIK 882
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 143/350 (40%), Gaps = 35/350 (10%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P SP M S+ +S L ++ ++ LL E+ R L N + I + + M+D
Sbjct: 572 PISPSIEMYNSL-ISGLFKSRRLVEVTDLLTEMGIR-GLTPNIVTYGALIDGWCKEGMLD 629
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLG---------------------------CILSKN 161
A ++ EM + GL ++ + ++ G C L +
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689
Query: 162 --YEEVKRI---FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
Y +++I E K + + PN+ YN I C++G + + K P+
Sbjct: 690 IRYAAIQKIADSLDESCKTF-LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ L+ G+ ++ ++ M + G+ + YN I LCK + + A+ L
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+ +G+ PN+ TY LI G+ K GN++ A KL M G P + LC+ G
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHG 868
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ E ++K+ + G +LV G ++ + ++L +M R
Sbjct: 869 DIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIR 918
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 2/252 (0%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A L+ G + ++ R+ E ++ G++ N N +I +C+ G+ ++
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRL-GLKTNLFICNSLINGYCKRGEIHEAEGVITR 392
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M +++P++ + LL G+ +E + + M + GI V YN ++ LC++
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
++A + M+ RG+ P+ Y L+ G K N EGA L+ + G F
Sbjct: 453 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 512
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
LC+ G+ A ++ G P T ++L+ G S V +A ++ G M++
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572
Query: 387 FPKSGDMWNAAL 398
S +M+N+ +
Sbjct: 573 ISPSIEMYNSLI 584
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+Q + M K G+ + LL G +N+E ++ + G + T+N
Sbjct: 454 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI-LARGFTKSRITFNT 512
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G I +M+ P+ + L+ G+ K KV ME+
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ + +YN I L K +R E LL M RG+ PN+ TY LI G+ KEG L+ A
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP-HFSTMKSLVTG 366
+ MT G + L + G + A + + + G+ P H +KS +
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR- 691
Query: 367 LASISKVAEA 376
A+I K+A++
Sbjct: 692 YAAIQKIADS 701
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 10/237 (4%)
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERF--HVH 116
LD C L P + + ++IA++ L + + + L + + N + +H
Sbjct: 702 LDESCKTFLLP----NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIH 757
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
Y A +D A + +EM + GL ++ NAL+ G S+N + +R+F + +
Sbjct: 758 G---YSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ-K 813
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TYN +I +C+ G+ + + + +M + I P+ + L+ G K E
Sbjct: 814 GLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERS 873
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
K+L M K G+ S + Y +Q + ++ L D M R + ++K +
Sbjct: 874 MKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 146/358 (40%), Gaps = 42/358 (11%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSI------AVSKLSQANHFNAISQ 96
R + +L+ ES+P AP + R+ + A+SKL+ + +
Sbjct: 26 RTLLWKLRDESHP------------APPELVSRICRLVLLRRCNAISKLNFVFSDDIVDA 73
Query: 97 LLEELKTRPDL----------RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSV 146
+L L+ P +QN R +V S Y + I + ++E Y L Q V
Sbjct: 74 VLRNLRLNPTASLGFFQFVSKQQNFRPNVKS---YCKLVHILSRGRMYDETRAY-LNQLV 129
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
D G ++ ++E+ ++ EF P ++ ++K + E G + + +
Sbjct: 130 DLCKFKDRGNVI---WDELVGVYREF----AFSPT--VFDMILKVYVEKGLTKNALYVFD 180
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
M + P+ LL K + V Q M + GI V + +I + + CK
Sbjct: 181 NMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDG 240
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ +EA + M + G++PN+ TY LI+G+ G++E AK + M+ G + +
Sbjct: 241 KVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYT 300
Query: 327 MFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ C+ + + A KV R + VP L+ G K+ +A L+ M
Sbjct: 301 LLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEM 358
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%)
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
T F ++L + ++ ++ V M KCG + N + +L K + A +
Sbjct: 157 TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 216
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M+ GI P++ +++ F K+G ++ A M N G EP+ + G+
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
E A V + KG + T L+ G K+ EA +++ M++
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQE 324
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 232 KYEDVGKVLQMMEKCGI----ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K++D G V+ E G+ A V+++ ++ + ++ A + D M G P+L
Sbjct: 133 KFKDRGNVIWD-ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSL 191
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
+ L++ K G A ++ M G PD + + C+ G+ + A +
Sbjct: 192 RSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKK 251
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G P+ T SL+ G S+ V A ++ M ++
Sbjct: 252 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 290
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 156/335 (46%), Gaps = 20/335 (5%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +S+ V L +A + LL+E+ R PD+ +++ +L G ++ +D A
Sbjct: 172 ITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV------IMYNTLLNGLCKSRRLDEA 225
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ + M + G +V N+L+ SK + R+ + G P+ YN VI
Sbjct: 226 LELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSE-RGCPPDVINYNTVIA 284
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH------KYEDVGKVLQMME 244
C ++L +M P+ + ++ G K+ K E ++L+MM+
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G Y + I+ LC+ ++S++A ALL M+ + P+L ++ +I K +L+
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A K+F M+ C+P+ + L +GGE + A++V M + + P +T S++
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL-MVESFRPGVATYNSVL 463
Query: 365 TGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
GL + ++ EA ++ G++ K G + A +
Sbjct: 464 DGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALI 498
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 17/315 (5%)
Query: 82 VSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEE 136
+ L +A + +LL+E++ R P + VH+ V+ G +A A+ F+
Sbjct: 37 IHGLCKAGKLDQAYELLDEMRDRGIPPGV------AVHNGVIKGLCKAGRFGDALGYFKT 90
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+ + N L+ + S EE +IF PN TY VI C+ G
Sbjct: 91 VAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDG 150
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+L M PN + +L+ G K + + +LQ M + G V +YN
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ LCK +R +EA L+ M+ G P + TY L+ F + ++ A +L M+
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA------SI 370
GC PD + LC+ + A + + +A VP T +++ GL +
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Query: 371 SKVAEANELIGLMKK 385
K+ A E++ +MK+
Sbjct: 331 WKLEAACEILEMMKQ 345
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY +I C++G Y +L EMR + I P ++ G K ++ D
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFG 298
+ + + +NI + +L K R EEA + + M S PN+ TY +I+G
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K+G L+ A +L M GC P+ + + LC+ G + + + +G+ P
Sbjct: 148 KDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVI 207
Query: 359 TMKSLVTGLASISKVAEANELIGLM 383
+L+ GL ++ EA EL+ LM
Sbjct: 208 MYNTLLNGLCKSRRLDEALELVQLM 232
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 85/211 (40%), Gaps = 1/211 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P +N VIK C++G + P+ F +L+ K + E+
Sbjct: 60 GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 237 GKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ + M V Y I LCK + + A LLD M G PN+ TY L+
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G K G + L MT G +PD + LC+ + AL++ + + G P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ +V A LI +M +R
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
R + PN +G L+ G K K + ++L M GI GV V+N I+ LCK R
Sbjct: 22 REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRF 81
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM-TNGGCEPDSYCFFM 327
+A + P++ T+ L+ K G +E A ++F SM T+ C P+ +
Sbjct: 82 GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
LC+ G+ + A+++ G P+ T LV GL + + L+ M +R
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201
Query: 387 FPKSGDMWNAAL 398
F M+N L
Sbjct: 202 FQPDVIMYNTLL 213
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ +++ VI S C+S D + Y I M + +PN + L+ G K + +
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V ++M + GV YN + LC + R EEA +++GM+ + P+ +Y LI G
Sbjct: 443 RVFELMVE-SFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGL 501
Query: 298 GKEGNLEGAKKLFASMTNGG 317
+ +E A +LF ++ G
Sbjct: 502 CRVSCVEEAYELFQAVEAKG 521
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 1/207 (0%)
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E K G PN+ TY VI+ C + S ++L M + P+ + F +++ K
Sbjct: 341 EMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
H + K+ MM + Y I L K ++A + + ++ +P + TY
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATY 459
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
++ G G +E A ++ M + C PD + LC+ E A ++ +A A
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEA 519
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEAN 377
KG+ LV L ++++A+
Sbjct: 520 KGFAMEVGVYNVLVNELCKKKRLSDAH 546
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F M + + + A AL+ G LSK E K + V P TYN
Sbjct: 403 LDAAYKIFGMMSERECKPNPVAYAALIDG--LSKGGEVDKAVRVFELMVESFRPGVATYN 460
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ C G ++ M K P+ +G L+ G + E+ ++ Q +E
Sbjct: 461 SVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAK 520
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G A V VYN+ + LCK KR +A + + ++ G K
Sbjct: 521 GFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 102/210 (48%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+EPN TY +I FC+ G + +LA+M+ + + N F ++ G+ ++ +D
Sbjct: 312 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDA 371
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ MEK G+ + YN LC++ R +EAK LL M+ G+ PN TY LI
Sbjct: 372 LKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISI 431
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K+G++ A++LF M G P + + + G A + + KG+VP
Sbjct: 432 HCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPD 491
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T SLV G KV A +L MK+R
Sbjct: 492 VYTYASLVHGHCVNGKVDVALKLFEEMKQR 521
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 6/269 (2%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
++LD C G + P + + + ++ + A LL +++ + + N+
Sbjct: 303 KVLDECVGNGVEP----NERTYGVLINGFCKIGQMEAAEMLLADMQGQ-GVGLNQIIFNT 357
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
I Y + M+D A++ M+K G+ + N L G +E K + ++
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEM- 416
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TY +I C+ GD + EM K P+ + +++ G+ K+ +
Sbjct: 417 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREA 476
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + MEK G V Y + C + + A L + M RG +PN+ Y LI G
Sbjct: 477 ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 536
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
KEG E A +L+ M G PD +
Sbjct: 537 LAKEGRSEAAFQLYDDMLKAGLIPDDSLY 565
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 3/237 (1%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A + ++ G S ++ +R+ + P+ +G+ N+ YN ++ + D V IL
Sbjct: 179 AASVVVDGLCKSGRVDDARRLLDDMPR-HGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + I + +L+ V + M+ + V +Y I + C+
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
A +LD + G++PN TY LI+GF K G +E A+ L A M G + F
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 328 FTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
C+ G + ALK+ +A+M K G T +L GL ++++ EA L+ +M
Sbjct: 358 MIDGYCRKGMVDDALKI-KAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM 413
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 163/383 (42%), Gaps = 53/383 (13%)
Query: 57 RILDICCGAS--------LAPESPLDRMAFSIAVSK-----LSQANHFNAISQLLEEL-K 102
R+L+ C A A + P R SI V K LS+ F A+ L+EE+ K
Sbjct: 111 RVLNRCGDAGNLGYRFFVWAAKQP--RYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRK 168
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL---- 158
P L + E F V + + A+M+ A++ +EM K+G + + GC+L
Sbjct: 169 ENPQLIEPELFVV-LVQRFASADMVKKAIEVLDEMPKFGFEP-----DEYVFGCLLDALC 222
Query: 159 --------SKNYE----------EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
+K +E E K + + + G EP+ Y ++ + +G +
Sbjct: 223 KHGSVKDAAKLFEDMRMRVGKMMEAKYVLVQMNEA-GFEPDIVDYTNLLSGYANAGKMAD 281
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
Y +L +MRR+ PNA + +L+ K + E+ KV ME+ + V Y +
Sbjct: 282 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 341
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
CK + ++ +LD M+ +G+ P+ TY H++ K+ + E +L M P
Sbjct: 342 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 401
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D + + C+ GE + A+++ G P T ++ GLAS + EA++
Sbjct: 402 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 461
Query: 381 GLM--------KKRFPKSGDMWN 395
M K+ + D+W+
Sbjct: 462 KEMLLLNTVLKDKKLEMAKDVWS 484
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 12/336 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + +++ ++ + Q + + LE L P ++IVL G A + A
Sbjct: 15 DIITYNVVLNGICQEGRVDDAMEFLENL---PSYGGEPNTVSYNIVLKGLFTAERWEDAE 71
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EEM G +V N L+ E + + PK YG PNS +YN ++ +
Sbjct: 72 KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPK-YGCTPNSLSYNPLLHA 130
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ + + M + P+ + LL + + + +L ++ G +
Sbjct: 131 FCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPV 190
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I L K +++EA LLD M+S+G++P++ TY + G +E +E A + F
Sbjct: 191 LISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFC 250
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G P + LC+ E A+ + ++ G +P+ ST LV GLA
Sbjct: 251 KVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEG 310
Query: 372 KVAEANELI------GLMKKRFPKSGDMWNAALPRQ 401
V EA +L+ G++ K+F K G + P Q
Sbjct: 311 LVKEARDLLGQLCSRGVVNKKFMKKGAVKMLDGPTQ 346
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TYN V+ C+ G L + PN + ++L G + ++ED
Sbjct: 11 GCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDA 70
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+++ M G V +N+ I LC+ E A +L+ + G PN +Y L+H
Sbjct: 71 EKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHA 130
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+ ++ A M + GC PD + LC+ GE + A+ + KG P
Sbjct: 131 FCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPV 190
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
+ +++ GL K EA EL+ M
Sbjct: 191 LISYNTVIDGLTKAGKTKEALELLDEM 217
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%)
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+L M G A + YN+ + +C+ R ++A L+ + S G +PN +Y ++ G
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
E A+KL M + GC P+ F M FLC+ G E A++V G P+
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
+ L+ K+ +A + LM R
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSR 150
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 40/329 (12%)
Query: 85 LSQANHFNAISQLLEEL-KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
LS+ F A+ L+EE+ KT P+L + E F V + + ANM+ A++ +EM KYGL
Sbjct: 141 LSKMRQFGAVWGLIEEMRKTNPELIEPELFVV-LMRRFASANMVKKAVEVLDEMPKYGLE 199
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
LL + + +E ++F + + + PN + ++ +C G
Sbjct: 200 PDEYVFGCLLDALCKNGSVKEASKVFEDMREKF--PPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+L +M+ + P+ F LL+G+ K D ++ M K G VN Y + IQ+LC
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 264 KL-KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG--------------------- 301
+ KR +EA + M G + ++ TY LI GF K G
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Query: 302 --------------NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
E +L M GC PD + + C+ GE + A+++
Sbjct: 378 VTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEA 376
A G P T ++ G S + EA
Sbjct: 438 MEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIE 179
Y A + A +M K G +V+ L+ C K +E R+F E + YG E
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER-YGCE 339
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
+ TY +I FC+ G YS+L +MR+K + P+ + ++ K+ ++E+ ++
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLEL 399
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++ M++ G + +YN+ I+ CKL +EA L + M + G+ P +DT+ +I+GF
Sbjct: 400 IEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS 459
Query: 300 EGNLEGAKKLFASMTNGG 317
+G L A F M + G
Sbjct: 460 QGFLIEACNHFKEMVSRG 477
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 144/339 (42%), Gaps = 9/339 (2%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
R+ +IL++ G+ P D + +++ +S +A N +L+ + PD+
Sbjct: 149 RMGKTRKAAKILEVLEGSGAVP----DVITYNVMISGYCKAGEINNALSVLDRMSVSPDV 204
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
+ S+ G+ + AM+ + M + V L+ + +
Sbjct: 205 VTYNTI-LRSLCDSGK---LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMK 260
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E + G P+ TYN ++ C+ G L +M +PN ++L
Sbjct: 261 LLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
++ D K+L M + G + V +NI I LC+ A +L+ M G +PN
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
+Y L+HGF KE ++ A + M + GC PD + LC+ G+ E A+++
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+KG P T +++ GLA K +A +L+ M+ +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++I + + + +LL+E++ R PD+ V+ I G+ +D A
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVL-VNGICKEGR---LDEA 293
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ +M G + +V N +L + + + +++ + + G P+ T+N +I
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR-KGFSPSVVTFNILIN 352
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C G IL +M + +PN+ + LL GF KE K + + L+ M G
Sbjct: 353 FLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN + +LCK + E+A +L+ + S+G P L TY +I G K G A KL
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M +PD+ + L + G+ + A+K G P+ T S++ GL
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKT 532
Query: 371 SKVAEANELIGLMKKR 386
+ A + + M R
Sbjct: 533 RQTDRAIDFLVYMINR 548
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 7/224 (3%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
I + PK +G +PNS +YN ++ FC+ L M + P+ + +L
Sbjct: 366 ILEKMPK-HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K+ K ED ++L + G + + YN I L K ++ +A LLD M ++ +KP+
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY L+ G +EG ++ A K F G P++ F LC+ + + A+
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVY 544
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELI------GLMKK 385
+ +G P ++ L+ GLA EA EL+ GLMK+
Sbjct: 545 MINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKR 588
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 7/206 (3%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ +G+ + L M P+ L+ GF + K K+L+++E
Sbjct: 106 NNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEG 165
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V YN+ I CK A ++LD M + P++ TY ++ G L+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A ++ M C PD + + C+ A+K+ +G P T LV
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 366 GLASISKVAEANELIGLMKKRFPKSG 391
G+ ++ EA + + M P SG
Sbjct: 283 GICKEGRLDEAIKFLNDM----PSSG 304
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 142/315 (45%), Gaps = 8/315 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + F+I V+ L +A N LL+ ++ + L H ++ ++ G +AN +D A+
Sbjct: 368 DVVTFTILVNALCKAGRINEAFDLLDTMRKQGVL---PNLHTYNTLISGLLRANRLDDAL 424
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT-EFPKVYGIEPNSETYNKVIK 190
F M+ G+ + A +LL K+ K + T E K GI PN N +
Sbjct: 425 DLFSNMESLGVEPT--AYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLY 482
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
S E G ++ E++ + P++ + +++ + K + ++ K+L M K
Sbjct: 483 SLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEP 542
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V V N I +L K R EEA + M + P + TY L+ G GKEG ++ A +LF
Sbjct: 543 DVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLF 602
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
SM GC P++ F LC+ E + ALK+ P T +++ G
Sbjct: 603 ESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQ 662
Query: 371 SKVAEANELIGLMKK 385
+++ A L MKK
Sbjct: 663 NQIKNAIWLFHQMKK 677
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+V G+ I M EEM+ GLR ++ + +E RI G
Sbjct: 236 MVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDD-DG 294
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ TY +I + C + + +M+ S +P+ + LL F + V
Sbjct: 295 CGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVE 354
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+ ME G A V + I + +LCK R EA LLD M +G+ PNL TY LI G
Sbjct: 355 KIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGL 414
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ L+ A LF++M + G EP +Y + + + + G AL+ A+G P+
Sbjct: 415 LRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNI 474
Query: 358 STMKSLVTGLASISKVAEANELIGLMK 384
+ + LA + ++ EA + +K
Sbjct: 475 VACNASLYSLAEMGRLGEAKAMFNELK 501
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 9/290 (3%)
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDAL 149
N + +EL +P L+ V+++++ G + + ++ A FEEM G
Sbjct: 775 NVFVKFTKELGVKPTLK------VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTY 828
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N+L+ S E+ ++ E G +PN+ TYN VI + +S + +
Sbjct: 829 NSLIDAHGKSGKINELFDLYDEM-LTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLV 887
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
P FG L+ G K + +D ++ M G +YNI + KL +
Sbjct: 888 SGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVD 947
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
A M+ GI+P+L +Y L+ G ++ A F + G +PD + +
Sbjct: 948 TACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMI 1007
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
L + E AL + +G VP T SL+ L + + EA ++
Sbjct: 1008 NGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
E +R+ +E G++P+ +T++ ++ + + + +V +L EM +RPN + +
Sbjct: 215 EVYRRMVSE-----GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTI 269
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+ ++ K ++ ++++ M+ G V Y + I +LC ++ ++A L M S
Sbjct: 270 CIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
KP+ TY L+ F G+L+ +K++ M G PD F + LC+ G A
Sbjct: 330 HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAF 389
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ +G +P+ T +L++GL +++ +A +L M+
Sbjct: 390 DLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNME 431
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 126/299 (42%), Gaps = 6/299 (2%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A AP D ++ + ++ N + L +E+ TR + N + I ++
Sbjct: 819 AGCAP----DTFTYNSLIDAHGKSGKINELFDLYDEMLTR-GCKPNTITYNMVISNLVKS 873
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +D AM + + + L+ G + S ++ +F YG PNS
Sbjct: 874 NRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVH-YGCRPNSAI 932
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN ++ + + G + M ++ IRP+ + +L+ + +D + ++
Sbjct: 933 YNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK 992
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G+ + YN+ I L + +R+EEA +L M +RGI P+L TY LI G G +E
Sbjct: 993 QAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIE 1052
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A K++ + G +P+ + + G E A + + M G P+ T L
Sbjct: 1053 EAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 140/344 (40%), Gaps = 37/344 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
FS + + + + LLEE+++ LR N + I + G+ ID A + +
Sbjct: 231 TFSALMVASGKRRNIKTVMGLLEEMESM-GLRPNIYTYTICIRVLGRDGKIDEAYRIMKR 289
Query: 137 MDKYGLRQSVDALNALLLG-----------CILSK------------------------N 161
MD G V L+ C+ +K +
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGH 349
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
++V++I+TE + G P+ T+ ++ + C++G + + +L MR++ + PN +
Sbjct: 350 LDKVEKIWTEM-EADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L++G + ++ +D + ME G+ Y + I K +A + M +R
Sbjct: 409 TLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR 468
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI PN+ ++ + G L AK +F + + G PDS + M + G+ + A
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+K+ P + SL+ L +V EA ++ M++
Sbjct: 529 IKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ +F +F K G++P + YN +I F E + +++ EM+ P+ + L+
Sbjct: 774 RNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLID 833
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
K K ++ + M G YN+ I +L K R ++A L ++S P
Sbjct: 834 AHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSP 893
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
T+ LI G K G L+ A ++F M + GC P+S + + + G +TA +
Sbjct: 894 TPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFF 953
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ + +G P + LV L +V +A
Sbjct: 954 KRMVKEGIRPDLKSYTILVDILCIAGRVDDA 984
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 140/337 (41%), Gaps = 26/337 (7%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
+++ + + ++ L EE+K+ PD F +S++ +G++ I+
Sbjct: 792 VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPD-----TFTYNSLIDAHGKSGKINELFD 846
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-IEPNSETYNKVIKS 191
++EM G + + N ++ + S ++ ++ + V G P T+ +I
Sbjct: 847 LYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLY--YNLVSGDFSPTPCTFGPLIDG 904
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+SG + + M RPN+ + +L+ G+ K + + + M K GI
Sbjct: 905 LLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPD 964
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ Y I + LC R ++A + + G+ P+L Y +I+G G+ E A LF
Sbjct: 965 LKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFH 1024
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG--LAS 369
M N G PD Y + L G E A K+ G P+ T +L+ G L+
Sbjct: 1025 EMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSG 1084
Query: 370 ISKVAEANELIGLMKKRF-----PKSGDMWNAALPRQ 401
S++A G+ KK P +G A LP Q
Sbjct: 1085 NSELA-----YGIYKKMMVGGCDPNTGTF--AQLPNQ 1114
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G N+ +YN +I +SG + M + ++P+ F L+ K + V
Sbjct: 189 GFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTV 248
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L+ ME G+ + Y I I+ L + + +EA ++ M G P++ TY LI
Sbjct: 249 MGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDA 308
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
L+ A LF M + +PD + G + K+ A G+ P
Sbjct: 309 LCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPD 368
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T LV L ++ EA +L+ M+K+
Sbjct: 369 VVTFTILVNALCKAGRINEAFDLLDTMRKQ 398
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 130/325 (40%), Gaps = 19/325 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT--RPDLRQNERFHVHSIVLYG---QANMID 128
D + F+ + + N L ++K RPD HV L ++ I+
Sbjct: 648 DVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPD-------HVTLCTLLPGVIKSGQIE 700
Query: 129 HAMQTFEEMDKYGLRQSVD-ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A + E+ Y + ++D + ++G IL++ E +F E I +
Sbjct: 701 DAFRITEDF-FYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIP 759
Query: 188 VIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+IK C+ +S ++ + ++ ++P + LL+ GF + H E + + M+
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSA 819
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A YN I + K + E L D ML+RG KPN TY +I K L+ A
Sbjct: 820 GCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKA 879
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L+ ++ +G P F L + G + A ++ + G P+ + LV G
Sbjct: 880 MDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNG 939
Query: 367 LASISKVAEANELIGLMKKRFPKSG 391
+ V A E KR K G
Sbjct: 940 YGKLGHVDTACEFF----KRMVKEG 960
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI--E 179
G+ I A+Q FE M+ +G + N LL C L KN +EV F K+ +
Sbjct: 590 GKEGQIQKAVQLFESMNGHGCSPNTITFNTLL-DC-LCKN-DEVDLALKMFYKMTTMNCR 646
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ T+N +I F + + + +M+ K +RP+ LL G K + ED ++
Sbjct: 647 PDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRI 705
Query: 240 LQ---------------------MMEKCGIASGV---------------NVYNIRIQSLC 263
+ ++ + G + +V I+ LC
Sbjct: 706 TEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLC 765
Query: 264 KLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K K++ A+ + G+KP L Y LI GF + N+E A LF M + GC PD+
Sbjct: 766 KHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDT 825
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + + G+ + + +G P+ T +++ L +++ +A +L
Sbjct: 826 FTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDL 882
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+R E+ + D M + I+ N+DTY + G L A M G ++Y +
Sbjct: 138 RRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSY 197
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
+FL Q G + AL+V R +++G P T +L+
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMV 237
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 142/311 (45%), Gaps = 1/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +++ + + + ++L ++ L +ER + I Y + ID A++ +
Sbjct: 263 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 322
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + GL+ ++ N+L+ G E + + T + ++P+S +YN ++ +C
Sbjct: 323 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD-WNLKPDSYSYNTLLDGYCRE 381
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +S +++ +M ++ I P + LL G + ++D ++ +M K G+A Y
Sbjct: 382 GHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGY 441
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ + L K++ E A L +L+RG + T+ +I G K G + A+++F M +
Sbjct: 442 STLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD 501
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC PD + C+ A KV A + P SL++GL ++ E
Sbjct: 502 LGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVE 561
Query: 376 ANELIGLMKKR 386
+L+ M R
Sbjct: 562 VTDLLTEMGIR 572
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 1/211 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+EPN TY+ +I + GD + +L M K + N + LL+ G+ K+ K ++
Sbjct: 222 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 281
Query: 237 GKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
KVL+ M E+ + Y + I C+ + ++A LLD ML G+K NL LI+
Sbjct: 282 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 341
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+ K G + A+ + M + +PDSY + C+ G A +C + +G P
Sbjct: 342 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 401
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ GL + +A ++ LM KR
Sbjct: 402 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 432
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 141/339 (41%), Gaps = 38/339 (11%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQ 132
R+ F+ +S L + ++ +++K DL + + ++ Y +A+ + A +
Sbjct: 473 RITFNTMISGLCKMGKMVEAEEIFDKMK---DLGCSPDGITYRTLIDGYCKASNVGQAFK 529
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M++ + S++ N+L+ G S+ EV + TE + G+ PN TY +I +
Sbjct: 530 VKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM-GIRGLTPNIVTYGALIDGW 588
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--------E 244
C+ G +S EM + N +++G Y+ + ++ ++Q M
Sbjct: 589 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 648
Query: 245 KCGIASGVN------------------------VYNIRIQSLCKLKRSEEAKALLDGMLS 280
+C + S + VYNI I LCK + ++A+ +
Sbjct: 649 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 708
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G P+ TY LIHG+ GN++ A +L M G P+ + LC+ +
Sbjct: 709 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 768
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A ++ KG P+ T +L+ G I + A +L
Sbjct: 769 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 6/288 (2%)
Query: 98 LEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
+E L P++ HS++ Y ++ A + M + G+ ++V L+ G
Sbjct: 218 MENLGVEPNI-----VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGY 272
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+E +++ + + P+ Y +I +C +G +L EM R ++ N
Sbjct: 273 CKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 332
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
L+ G+ K + + V+ M + YN + C+ + EA L D
Sbjct: 333 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCD 392
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
ML GI+P + TY L+ G + G + A +++ M G PD + L +
Sbjct: 393 KMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKME 452
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+E A + + +A+G+ T ++++GL + K+ EA E+ MK
Sbjct: 453 NFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 113/252 (44%), Gaps = 2/252 (0%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A L+ G + ++ R+ E ++ G++ N N +I +C+ G+ ++
Sbjct: 300 AYGVLIDGYCRTGKIDDAVRLLDEMLRL-GLKTNLFICNSLINGYCKRGEIHEAEGVITR 358
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M +++P++ + LL G+ +E + + M + GI V YN ++ LC++
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
++A + M+ RG+ P+ Y L+ G K N EGA L+ + G F
Sbjct: 419 FDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNT 478
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
LC+ G+ A ++ G P T ++L+ G S V +A ++ G M++
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538
Query: 387 FPKSGDMWNAAL 398
S +M+N+ +
Sbjct: 539 ISPSIEMYNSLI 550
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+Q + M K G+ + LL G +N+E ++ + G + T+N
Sbjct: 420 DDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI-LARGFTKSRITFNT 478
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G I +M+ P+ + L+ G+ K KV ME+
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ + +YN I L K +R E LL M RG+ PN+ TY LI G+ KEG L+ A
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP-HFSTMKSLVTG 366
+ MT G + L + G + A + + + G+ P H +KS +
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR- 657
Query: 367 LASISKVAEA 376
A+I K+A++
Sbjct: 658 YAAIQKIADS 667
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 118/288 (40%), Gaps = 35/288 (12%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P SP M S+ +S L ++ ++ LL E+ R L N + I + + M+D
Sbjct: 538 PISPSIEMYNSL-ISGLFKSRRLVEVTDLLTEMGIR-GLTPNIVTYGALIDGWCKEGMLD 595
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLG---------------------------CILSKN 161
A ++ EM + GL ++ + ++ G C L +
Sbjct: 596 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 655
Query: 162 --YEEVKRI---FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
Y +++I E K + + PN+ YN I C++G + + K P+
Sbjct: 656 IRYAAIQKIADSLDESCKTF-LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 714
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ L+ G+ ++ ++ M + G+ + YN I LCK + + A+ L
Sbjct: 715 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 774
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ +G+ PN+ TY LI G+ K GN++ A KL M G P C
Sbjct: 775 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSIQC 822
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 131/314 (41%), Gaps = 24/314 (7%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDL----------RQNERFHVHSIVLYGQANMIDHA 130
A+SKL+ + + +L L+ P +QN R +V S Y + I
Sbjct: 24 AISKLNFVFSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKS---YCKLVHILSR 80
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++E Y L Q VD G ++ ++E+ ++ EF P ++ ++K
Sbjct: 81 GRMYDETRAY-LNQLVDLCKFKDRGNVI---WDELVGVYREF----AFSPT--VFDMILK 130
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ E G + + + M + P+ LL K + V Q M + GI
Sbjct: 131 VYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVP 190
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V + +I + + CK + +EA + M + G++PN+ TY LI+G+ G++E AK +
Sbjct: 191 DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVL 250
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLAS 369
M+ G + + + C+ + + A KV R + VP L+ G
Sbjct: 251 KFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCR 310
Query: 370 ISKVAEANELIGLM 383
K+ +A L+ M
Sbjct: 311 TGKIDDAVRLLDEM 324
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 4/206 (1%)
Query: 182 SETYNKVIKSFCESGDSSSVY--SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
+ Y + C+ D +V ++ R + P T F ++L + ++ ++ V
Sbjct: 87 TRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSP--TVFDMILKVYVEKGLTKNALYV 144
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M KCG + N + +L K + A + M+ GI P++ +++ F K
Sbjct: 145 FDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCK 204
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+G ++ A M N G EP+ + G+ E A V + KG + T
Sbjct: 205 DGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVT 264
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
L+ G K+ EA +++ M++
Sbjct: 265 YTLLIKGYCKQCKMDEAEKVLRGMQE 290
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 5/159 (3%)
Query: 232 KYEDVGKVLQMMEKCGI----ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K++D G V+ E G+ A V+++ ++ + ++ A + D M G P+L
Sbjct: 99 KFKDRGNVIWD-ELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSL 157
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
+ L++ K G A ++ M G PD + + C+ G+ + A +
Sbjct: 158 RSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKK 217
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G P+ T SL+ G S+ V A ++ M ++
Sbjct: 218 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 256
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A F+EM + G+ +V N L+ G + E +++ + K + PN TYN
Sbjct: 283 ICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA-AVSPNLITYN 341
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ G+ S+L +++ + P+ + +L+ G+ K ++ V + + ME
Sbjct: 342 TLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGR 401
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI+ + I + +L+ E+A + M G+ P++ Y LIHG +GN++ +
Sbjct: 402 GISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKES 461
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KLF SM EP + + C+ AL++ R AKG VP+ ++ S++
Sbjct: 462 SKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGV 521
Query: 367 LASISKVAEANELIGLM 383
L K EA L+ M
Sbjct: 522 LCKDGKWEEAEVLLDKM 538
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 6/323 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
D +F I + + + + QLL L+ D+ + +++ ++ G + I+ A
Sbjct: 160 FDVYSFGIMIKGCCENGNLDKSFQLLGLLQ---DMGLSPNVVIYTTLIDGCCKNGDIERA 216
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F++M + GL + L+ G + K ++ E K+ G+ PN TYN ++
Sbjct: 217 RLFFDKMGEMGLVANQYTFTVLING-LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMN 275
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C G + + EMR + + N + L+ G +E + + K++ M+K ++
Sbjct: 276 EYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP 335
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN I C + ++A +LLD + S G+ P+L TY LI G+ K GN +G L
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLA 395
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G P + + E E A ++ + G VP L+ GL
Sbjct: 396 REMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMK 455
Query: 371 SKVAEANELIGLMKKRFPKSGDM 393
+ E+++L M + + D+
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSDV 478
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 140/328 (42%), Gaps = 29/328 (8%)
Query: 72 PLDRMA-FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
PL ++ F+ ++ + Q H ++IS LL+ L L ++ H S++L +N I
Sbjct: 18 PLQALSLFNSSIQQGFQHTH-HSISFLLQHL-----LDHHKLPHAQSLILQILSNKISSP 71
Query: 131 MQTFEEMDKYGLR-QSVDALNALLLGCIL-----SKNYEEVKRIFTEF-PKVYGIEPNSE 183
T + + + Q+ ALL I+ S+ ++ F E K PN
Sbjct: 72 FFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPN-- 129
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+N ++ S S + E++ + ++ + FG+++ G + + ++L ++
Sbjct: 130 IFNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLL 188
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G++ V +Y I CK E A+ D M G+ N T+ LI+G K+G
Sbjct: 189 QDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLK 248
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA------SMAKGWVPHF 357
+ LF M G P+ Y + C EY K+CRA +G +
Sbjct: 249 KDGFDLFEKMKINGLFPNLYTYN------CLMNEYCGEGKICRAFDLFDEMRERGVEANV 302
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ G+ +V EA +L+ MKK
Sbjct: 303 VTYNTLIGGMCREERVWEAEKLVDQMKK 330
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 1/203 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A +++ GL S+ N L+ G + N++ V + E GI P+ T
Sbjct: 353 LDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEG-RGISPSKVTCT 411
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I ++ + + I + M + + P+ +G+L+ G + ++ K+ + M +
Sbjct: 412 VLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEM 471
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ +YN I CK S A LL M ++G+ PN+ +Y +I K+G E A
Sbjct: 472 HVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEA 531
Query: 307 KKLFASMTNGGCEPDSYCFFMFT 329
+ L M +P + M +
Sbjct: 532 EVLLDKMIELQLKPSASILNMIS 554
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++I + S+A ++ ++ L E++ R + ++ I Y + ++ A Q +
Sbjct: 373 VTYNILIEGYSKAGNWKGVADLAREMEGR-GISPSKVTCTVLIDAYVRLQEMEKAFQIYS 431
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M+K+GL V L+ G + N +E ++F +++ +EP+ YN +I +C+
Sbjct: 432 SMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMH-VEPSDVIYNTMIHGYCKE 490
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+S +L EM K + PN + ++ K+ K+E+ +L M + + ++
Sbjct: 491 DNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASIL 550
Query: 256 NI 257
N+
Sbjct: 551 NM 552
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 137/316 (43%), Gaps = 17/316 (5%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQ 144
L A + + L+E++ R + E V +I + +A D A++TF G R
Sbjct: 8 LPAAGDVDGVQYALQEMRLR-GVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66
Query: 145 -SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
V N LL + V ++ K G++PN TYN +I++ C++ +
Sbjct: 67 PGVRVYNHLLDALLRENMVGAVVPVYDNMRKA-GVDPNVYTYNLLIRALCQNDRVDAARK 125
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+L EM RK P+ G +++G K + E+ L E + + YN + +LC
Sbjct: 126 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA--ETVPVQAS---YNAVVHALC 180
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
R E ++++ M+ RG++PN+ TY ++ F K L A + A M + GC P+
Sbjct: 181 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 240
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
F + G+ AL + + +GW P + L+ GL I + A + M
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300
Query: 384 KKRFPKSGDMWNAALP 399
K+ NA LP
Sbjct: 301 KR---------NALLP 307
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++PN TY ++ +FC++ + +ILA M PN F L+ GF+++ K D
Sbjct: 199 GLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 258
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M G A YN+ I+ LC + + A + M + PN TY L+ G
Sbjct: 259 LSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDG 318
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F G+L+GA ++ M + GC+P+ + LC+ ++ A + + P+
Sbjct: 319 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPN 378
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ L +V A + M++
Sbjct: 379 TVTFNTLIGRLCDCGRVGRALNVFHGMRR 407
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ A +D AM + EM G + +V ++ +++ + + + + P
Sbjct: 319 FSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM-LMDNCPP 377
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ T+N +I C+ G ++ MRR PN + LL G ++E ++D ++
Sbjct: 378 NTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMV 437
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G + YN I LC++ + A LL M+ +GI+P+ T+ +IH + KE
Sbjct: 438 IEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKE 497
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A L M C + + + LC G+ A+ + +G P+ +T
Sbjct: 498 GKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATW 557
Query: 361 KSLVTGL 367
LV +
Sbjct: 558 NVLVRAI 564
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ +YN +I+ C GD M+R ++ PNAT + L+ GF +
Sbjct: 269 GWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGA 328
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M+ G V VY I LCK ++A++L+D ML PN T+ LI
Sbjct: 329 MLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGR 388
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G + A +F M GC P+ + + L + G ++ A + + G+
Sbjct: 389 LCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS 448
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
T +++ L + A L+G M
Sbjct: 449 LVTYNTVINCLCQMCMRKHAMLLLGRM 475
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V A AL+ GC + E +R+F E P + G+ PN TY ++ + G +++
Sbjct: 38 VTACTALVNGCCKGGDVAEARRVFDEMP-LLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
EMRR + PN + L+ + + ++E + M GI V YN I LC+
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ +A LLD M + G +P++ T+ L+ G+GK G + A F M G +P + +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
M C+ + A + +G P T L+ A + + +A E++ M+K
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 4/272 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H +GQ + FEEM + G+ ++ N L+ + +E + +F E P
Sbjct: 80 MHGYFTHGQR---EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP- 135
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V GI N +YN +I C G +L MR + RP+ F LL+ G+ K K
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ M+ G YN+ I C+ + A L M RG++P TY LI
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F +E ++ A ++ A M G E D++ + + LC G + A K+ ++ KG
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P ++ G +A +LI M+++
Sbjct: 316 PSNVIYDMMIYGYGREGSSYKALKLIMEMRQK 347
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 12/262 (4%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++ + + + F L +E+ R +R ++ L + D A + + M
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA-KLLDMM 169
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP-----KVYGIEPNSETYNKVIKSF 192
G R S+ N L+ G Y + ++ P K G +P++ TYN +I F
Sbjct: 170 RTEGTRPSIITFNLLVDG------YGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGF 223
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C + D + L++M+ + + P + +L+ F +E+ ++L MEK G+
Sbjct: 224 CRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDA 283
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y + +++LC ++A+ L M +G++P+ Y +I+G+G+EG+ A KL
Sbjct: 284 HTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIME 343
Query: 313 MTNGGCEPDSYCFFMFTYFLCQ 334
M G P+S + + LC+
Sbjct: 344 MRQKGLIPNSASYGLTIRVLCK 365
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+ GD + + EM + PN + L+ G++ + E + + M + G
Sbjct: 44 LVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGG 103
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + YN I C+ E A++L D M RGI N+ +Y LI G + G L A
Sbjct: 104 VEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAA 163
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KL M G P F + + G+ AL A G+ P T L+ G
Sbjct: 164 KLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGF 223
Query: 368 ASISKVAEANELIGLMKKR 386
+ AN + MK+R
Sbjct: 224 CRARDMTRANRALSDMKER 242
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG+A + +A+ F +M G + S N L+ G +++ R ++ K G+EP
Sbjct: 188 YGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDM-KERGLEP 246
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
TY +I SF + ILA M + + +A +G+L+ E +D K+
Sbjct: 247 TKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLF 306
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M + G+ +Y++ I + S +A L+ M +G+ PN +Y I K+
Sbjct: 307 QSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKD 366
Query: 301 GNLEGAKKLFASMTNGGCEP-DSYC 324
+ A+ L M G + +S C
Sbjct: 367 DKCQEAEALLDDMVRAGLQTSESIC 391
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +++ ++ +A ++ L ++K R L + + I + + N + A +
Sbjct: 214 VTYNMLIAGFCRARDMTRANRALSDMKER-GLEPTKVTYTILIDSFARENHMGKAFEILA 272
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M+K GL L+ + N ++ +++F + G+EP++ Y+ +I +
Sbjct: 273 GMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGE-KGVEPSNVIYDMMIYGYGRE 331
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S ++ EMR+K + PN+ +GL + K+ K ++ +L M + G+ + ++
Sbjct: 332 GSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESIC 391
Query: 256 NIRIQSLCKLKRS 268
+ + +L+ S
Sbjct: 392 QALLDAKARLRGS 404
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 137/335 (40%), Gaps = 37/335 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+F + L + F + L+E ++ R L + F + + Y +A + A++TFE+
Sbjct: 181 SFHNLIEALGKIKQFRLVWSLVEAMRCR-GLLSKDTFRL-IVRRYARARKVKEAVETFEK 238
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK---------------------- 174
M +GL+ + N L+ SK ++ IF E +
Sbjct: 239 MAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEK 298
Query: 175 -------VY------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
VY G++P+ Y +I SFC+SG + EM P+ +
Sbjct: 299 DLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYC 358
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ G E + ++ K ++ + G V N + + C+ + + A ++D M
Sbjct: 359 MLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKS 418
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI PN TY ++H K +E A +F M+ GCEP + M C + A
Sbjct: 419 GIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVA 478
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LKV KG +P +L+ GL +++ EA
Sbjct: 479 LKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEA 513
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 12/238 (5%)
Query: 118 IVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+V YG ++ D A++ F EM+ G S L+ G + +E + F
Sbjct: 319 VVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYF- 377
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E K G T N V+ ++C S + ++ EMR+ I PN+ + ++L K
Sbjct: 378 ELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKS 437
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K E+ V Q M K G +N Y + + C +R + A + + M +G+ P + +
Sbjct: 438 QKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMF 497
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY----ETALKV 344
LI+G E LE A F M + G P F L +GG E ALK+
Sbjct: 498 SALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKL 555
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 11/236 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D +A+ + +S ++ + ++ E++T + HV+ +++ G +D A+
Sbjct: 318 DVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSP---HVYCMLINGLGSEERLDEAL 374
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ FE G V NA++ S ++ ++ E K GI PNS TY+ ++
Sbjct: 375 KYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRK-SGIGPNSRTYDIILHH 433
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+S Y++ M + P + +++ F + + KV M++ G+
Sbjct: 434 LIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPC 493
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+++++ I LC R EEA A ML RGI+P + +L KE +EG +
Sbjct: 494 MHMFSALINGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNL-----KEALIEGGR 544
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 155/381 (40%), Gaps = 54/381 (14%)
Query: 55 PFRILDICCGAS--------LAPESPLDRMAFSI---AVSKLSQANHFNAISQLLEEL-K 102
P R+L C A A + P R ++ + + L + F A+ L+EE+ K
Sbjct: 110 PERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRK 169
Query: 103 TRPDLRQNERFHVHSIVL---YGQANMIDHAMQTFEEMDKYGLRQS-------VDAL--- 149
P + E F IVL + M+ A++ +EM KYG +DAL
Sbjct: 170 ENPYMLTPEVF----IVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN 225
Query: 150 ------------------------NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+LL G E K + + K G EP+ Y
Sbjct: 226 GSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQI-KEAGFEPDIVVY 284
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ + ++G + +LAEM++ + PNA F +L+ F K K ++ ++ M+
Sbjct: 285 NNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQG 344
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + V Y I CK +++A +LD M+ +G P+ +Y ++ K+ LE
Sbjct: 345 SGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEE 404
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
+L M GC PD + +C+ G+ + A+++ A G P T +V
Sbjct: 405 CMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVH 464
Query: 366 GLASISKVAEANELIGLMKKR 386
G S + EA + M +R
Sbjct: 465 GFLSQGCLVEACDYFKEMVER 485
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA + A EM K + + L+ ++ +E RIFTE + G E
Sbjct: 291 YAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEM-QGSGCEA 349
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I FC+ G++ Y IL +M +K P+ + ++ K+ + E+ +++
Sbjct: 350 DVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELI 409
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G +N+YN I+ +CKL +EA L M + G+ P LDTY ++HGF +
Sbjct: 410 EEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ 469
Query: 301 G-------------------------------------NLEGAKKLFASMTNGGCEPDSY 323
G LE AK +++ MT GCE +
Sbjct: 470 GCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVS 529
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ ++ + L G + A C M +P T L+ GL +
Sbjct: 530 AWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL 576
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 155/381 (40%), Gaps = 54/381 (14%)
Query: 55 PFRILDICCGAS--------LAPESPLDRMAFSI---AVSKLSQANHFNAISQLLEEL-K 102
P R+L C A A + P R ++ + + L + F A+ L+EE+ K
Sbjct: 133 PERVLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRK 192
Query: 103 TRPDLRQNERFHVHSIVL---YGQANMIDHAMQTFEEMDKYGLRQS-------VDAL--- 149
P + E F IVL + M+ A++ +EM KYG +DAL
Sbjct: 193 ENPYMLTPEVF----IVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN 248
Query: 150 ------------------------NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+LL G E K + + K G EP+ Y
Sbjct: 249 GSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQI-KEAGFEPDIVVY 307
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ + ++G + +LAEM++ + PNA F +L+ F K K ++ ++ M+
Sbjct: 308 NNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQG 367
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + V Y I CK +++A +LD M+ +G P+ +Y ++ K+ LE
Sbjct: 368 SGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEE 427
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
+L M GC PD + +C+ G+ + A+++ A G P T +V
Sbjct: 428 CMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVH 487
Query: 366 GLASISKVAEANELIGLMKKR 386
G S + EA + M +R
Sbjct: 488 GFLSQGCLVEACDYFKEMVER 508
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 38/287 (13%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA + A EM K + + L+ ++ +E RIFTE + G E
Sbjct: 314 YAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEM-QGSGCEA 372
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I FC+ G++ Y IL +M +K P+ + ++ K+ + E+ +++
Sbjct: 373 DVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELI 432
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G +N+YN I+ +CKL +EA L M + G+ P LDTY ++HGF +
Sbjct: 433 EEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ 492
Query: 301 G-------------------------------------NLEGAKKLFASMTNGGCEPDSY 323
G LE AK +++ MT GCE +
Sbjct: 493 GCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELNVS 552
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ ++ + L G + A C M +P T L+ GL +
Sbjct: 553 AWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRGLKKL 599
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 14/273 (5%)
Query: 123 QANMIDHAMQTFEEMDK-----YGLRQSV----DALNALLLGCILSKNYEEVKRIFTEFP 173
+AN ID A++ F++M+K +G V ++AL + K YE KR+
Sbjct: 192 KANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM----- 246
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G PN TY+ +I C+ S +L M+ K N DF +L +K +
Sbjct: 247 RAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ 306
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E + + + K G V YN+ + LCK R +EA +L M+ + P++ TY +
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I GF K G ++ A +F M C P F + + + A +V + G+
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGF 426
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+P T L+ + V A E+ MK++
Sbjct: 427 IPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 459
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 103/253 (40%), Gaps = 1/253 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A Q FE + K G + +V N + G + +E RI E + + P+ TY+
Sbjct: 307 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVE-SKVTPDVITYSS 365
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC++G + M P+ F LL GF + K + +V + M G
Sbjct: 366 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 425
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
G+ YN+ + +C E A + M + +P+ +TY LI + ++ AK
Sbjct: 426 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAK 485
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ M P+ LC+ GE + A V + G P T K LV L
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Query: 368 ASISKVAEANELI 380
K A++L+
Sbjct: 546 YLRKKWEAASKLL 558
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 109/244 (44%), Gaps = 4/244 (1%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A+ ++ A++ + +M K RQ A L+ C+ + + F + + + PN
Sbjct: 443 ADSVESALEIYHKM-KRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGA 501
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+ +++ C+ G+ S+L + +P F +L+ Y K+E K+L+
Sbjct: 502 ICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLR-- 559
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G + Y++ + +CK + +EA +++ M+ +G++P+ TY ++ +
Sbjct: 560 -SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRV 618
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A F M + GC P + + C + A ++ A +A G+ P TM++L
Sbjct: 619 ESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678
Query: 364 VTGL 367
+ L
Sbjct: 679 SSCL 682
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G + N+ T ++ +F ++ + +L E PN + ++ GF K + +
Sbjct: 71 GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L M++ G+ V +++ IQ LC+ R +EA M PN+ TY +++G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNG 189
Query: 297 FGKEGNLEGAKKLFASM-----TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
K ++ A +LF M + GCEPD + LC+ + A + + A
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G P+ T SL+ GL + + +E EL+ MK++
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEK 284
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 131/306 (42%), Gaps = 15/306 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +++AV L +A + ++L E+ K PD+ +S ++ G +A +D A
Sbjct: 326 VTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI------TYSSIIDGFCKAGRMDKA 379
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F M + LL G K E R+ + G P +TYN ++
Sbjct: 380 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA-GFIPGLQTYNVLMD 438
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + S I +M+RK +P+ + L+ + + ++ + L +ME +
Sbjct: 439 CVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 498
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ + ++ LCK +EA ++LD ++ G +P +T+K L+ E A KL
Sbjct: 499 NGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLL 558
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
S G D+ + + +C+ G+ + A++V + KG P T +++ L +
Sbjct: 559 RS---PGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGL 615
Query: 371 SKVAEA 376
+V A
Sbjct: 616 DRVESA 621
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGV------------NVYN--IRIQSLCKLKRSE 269
LAG+ E G+VLQ +E +A N Y + + + K KR E
Sbjct: 34 LAGYASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHE 93
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA LL L PN Y +I+GF K G ++ A +L M G + D
Sbjct: 94 EAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLI 153
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
LC+ G + AL+ + SM + P+ T ++V GL +++ EA EL M+KR+
Sbjct: 154 QGLCRKGRIDEALEQFK-SMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEA 212
Query: 390 S 390
S
Sbjct: 213 S 213
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 128/276 (46%), Gaps = 7/276 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCIL-----SKNYEEVKRIFTEFPKVYGIEPN 181
+ A+ +++G +V + NA+L + ++Y++ +R+F + + G+ PN
Sbjct: 148 VPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVR-NGVSPN 206
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I+ GD + +M ++ I PN + L+ K+ K ++ +L+
Sbjct: 207 VYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLR 266
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+A+ + YN I LC R E L++ M +G+ P+ TY L++GF KEG
Sbjct: 267 AMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEG 326
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
NL L + M G P+ + +C+ G A+++ +G P+ T
Sbjct: 327 NLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYT 386
Query: 362 SLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNA 396
+L+ G + EA +++ ++ F S +NA
Sbjct: 387 TLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 114/255 (44%), Gaps = 1/255 (0%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EEM GL N L+ G N + + +E G+ PN TY +I
Sbjct: 298 ELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVG-KGLSPNVVTYTTLINC 356
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++G+ S I +MR + +RPN + L+ GF ++ + KVL M G +
Sbjct: 357 MCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPS 416
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN + C L R +EA +L GM+ RG+ P++ +Y +I GF +E L A ++
Sbjct: 417 VVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKE 476
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M G PD+ + LC + A + R M +G P T SL+
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536
Query: 372 KVAEANELIGLMKKR 386
++++A L M +R
Sbjct: 537 ELSKALRLHDEMVQR 551
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 2/262 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + F +M + G+ +V N ++ G + + E+ + K GI PN TYN
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEK-EGISPNVVTYNT 247
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I + C+ ++L M + N + ++ G + + +VG++++ M G
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YN + CK + LL M+ +G+ PN+ TY LI+ K GNL A
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F M G P+ + CQ G A KV + G+ P T +LV G
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427
Query: 368 ASISKVAEANELI-GLMKKRFP 388
+ +V EA ++ G++++ P
Sbjct: 428 CFLGRVQEAVGILRGMVERGLP 449
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 114 HVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+ +++++ G + ++ + +M+K G+ +V N L+ K +E +
Sbjct: 208 YTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRA 267
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
V G+ N +YN VI C G S V ++ EMR K + P+ + L+ GF KE
Sbjct: 268 M-AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEG 326
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+L M G++ V Y I +CK A + D M RG++PN TY
Sbjct: 327 NLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYT 386
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI GF ++G + A K+ + M G P + + C G + A+ + R + +
Sbjct: 387 TLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVER 446
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANEL 379
G P + +++ G ++ +A ++
Sbjct: 447 GLPPDVVSYSTVIAGFCRERELGKAFQM 474
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 133/305 (43%), Gaps = 2/305 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++++ ++ L + + +L+EE++ + L +E + + + + + +
Sbjct: 278 ISYNSVINGLCGKGRMSEVGELVEEMRGK-GLVPDEVTYNTLVNGFCKEGNLHQGLVLLS 336
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM GL +V L+ + N IF + +V G+ PN TY +I FC+
Sbjct: 337 EMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM-RVRGLRPNERTYTTLIDGFCQK 395
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + Y +L+EM P+ + L+ G+ + ++ +L+ M + G+ V Y
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I C+ + +A + + M+ +G+ P+ TY LI G + L A LF M
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMR 515
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G PD + C GE AL++ + +G++P T L+ GL ++
Sbjct: 516 RGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKV 575
Query: 376 ANELI 380
A L+
Sbjct: 576 AKRLL 580
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 7/245 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A + A++ F++M GLR + L+ G E ++ +E V G P+
Sbjct: 359 KAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEM-IVSGFSPSV 417
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++ +C G IL M + + P+ + ++AGF +E ++GK QM
Sbjct: 418 VTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRE---RELGKAFQM 474
Query: 243 MEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
E+ G+ Y+ IQ LC ++ EA L M+ RG+ P+ TY LI+ +
Sbjct: 475 KEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCV 534
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+G L A +L M G PD+ + + L + + A ++ + VP T
Sbjct: 535 DGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVT 594
Query: 360 MKSLV 364
+L+
Sbjct: 595 YNTLI 599
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 136/356 (38%), Gaps = 58/356 (16%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
G L+P + + ++ ++ + +A + + ++ ++++ R LR NER + I + Q
Sbjct: 340 GKGLSP----NVVTYTTLINCMCKAGNLSRAVEIFDQMRVR-GLRPNERTYTTLIDGFCQ 394
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNS 182
+++ A + EM G SV NAL+ G C L + E V + + G+ P+
Sbjct: 395 KGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVER--GLPPDV 452
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+Y+ VI FC + + + EM K + P+ + L+ G + K + + +
Sbjct: 453 VSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFRE 512
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG------ 296
M + G+ Y I + C +A L D M+ RG P+ TY LI+G
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKAR 572
Query: 297 --------------------------------------------FGKEGNLEGAKKLFAS 312
F +G + A ++F +
Sbjct: 573 TKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKT 632
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M +P++ + + + +GG A + + H + +LV LA
Sbjct: 633 MLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALA 688
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P++ T+N ++ C++G +S+LA M ++ RP+ + L++G K+ +
Sbjct: 40 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ G V Y+I LCK R +EA L+ M G PNL TY LI G
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDG 159
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K E A +L ++ + G PD + + LC+ G + ALK+ + +G P
Sbjct: 160 LCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 219
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T +L+ GL +V EA+ +
Sbjct: 220 VITYTALMEGLCRTGRVDEAHHI 242
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ TYN +I C++ + +L EM + + P+ F ++ G K K+E
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L +M + YN I LCK + + AK L+D +S G P++ TY L G
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G ++ A +L M+ GC P+ + LC+ + E A ++ ++ G+VP
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T +V GL ++ +A +++ M KR
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKR 214
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 132/303 (43%), Gaps = 11/303 (3%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
+ E K PD+ ++I++ G +A+ D A + EM G+ N+++ G
Sbjct: 1 MNERKVAPDV------FTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG 54
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+ +E + + P+ TYN +I C+ + +++ E P
Sbjct: 55 LCKAGKFERAHSLLAVMAE-RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVP 113
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + +L G K + ++ ++++ M G + YN I LCK ++E+A LL
Sbjct: 114 DVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELL 173
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
+ ++S G P++ TY ++ G KEG L+ A K+ M GC P + LC+
Sbjct: 174 ETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 233
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
G + A + + ++K SLV G S+ EA +++ + R D++N
Sbjct: 234 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RGTPYIDVYN 291
Query: 396 AAL 398
A +
Sbjct: 292 ALM 294
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 6/247 (2%)
Query: 141 GLRQS--VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
G+R + +D NAL+ G +E+ +F + G PN +TYN V+ C+ G
Sbjct: 280 GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMA-CRGCVPNIKTYNIVMDGLCKHGKV 338
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ L M P+ + +++ G +K K ++ +VL M + GI YN
Sbjct: 339 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ CK +R ++A +L M+ G+ P+ TY LI G + L A +L M GC
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458
Query: 319 EPDSYCFFMFTYF--LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
S C T LC+ G + AL + G + T + L ++ EA
Sbjct: 459 VV-SACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 517
Query: 377 NELIGLM 383
+ L+ M
Sbjct: 518 SSLLSEM 524
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 123/279 (44%), Gaps = 13/279 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKN---YEEVKRIFTEFPKVYGIEPNS 182
ID A + +EM G ++ N L+ G C SK YE ++ + + G P+
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS-----GFVPDV 185
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++ C+ G ++ M ++ P+ + L+ G + + ++ + +
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + Y + CK R++EA+ ++DG+ RG P +D Y L+ G+ KEG
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGR 302
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+ +F M GC P+ + + LC+ G+ + A + + G VP +
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362
Query: 363 LVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAALPR 400
++ GL SK EA +++ +++ P +N + +
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQ 401
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ ++ + L +A+ +LLE L + PD+ ++I++ G + +D A
Sbjct: 151 VTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV------TYTIIVDGLCKEGRLDKA 204
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK---------------- 174
++ E M K G SV AL+ G + +E IF E
Sbjct: 205 LKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNG 264
Query: 175 -------------VYGIE--PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
V GI P + YN ++ +C+ G + ++ +M + PN
Sbjct: 265 YCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKT 324
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +++ G K K ++ L+ M G V YNI I L K + +EA+ +LD M+
Sbjct: 325 YNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMI 384
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ----G 335
GI P+ TY L+ F KE + A + +M G +PD+ + L Q G
Sbjct: 385 QAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLG 444
Query: 336 GEYE 339
YE
Sbjct: 445 DAYE 448
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 10/223 (4%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +++ C +G + I EM K +A + L+ G+ K + ++
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 274
Query: 237 GKVLQMMEKCGIASG--VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
KV+ GI ++VYN + CK R +E + + M RG PN+ TY ++
Sbjct: 275 QKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVM 329
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G K G ++ A SM + GC PD + + L + + + A +V + G
Sbjct: 330 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 389
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
P T +L +A K ++ +G++K D N
Sbjct: 390 PDAVTYNTL---MAQFCKEERFDDAVGILKNMIKAGVDPDNVT 429
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G+E N+ TYN I C+ G S+L+EM ++R + + ++ G K + +
Sbjct: 492 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--DTLRDEVS-YTTVIIGLCKAEQLDR 548
Query: 236 VGKVL-QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
K+ +M+ G+ + +N+ I + K KR +EA LL+ M+ RG P++ TY +I
Sbjct: 549 ASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVI 608
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
K ++ A +LF M G S + + Y LC G + AL+V
Sbjct: 609 TCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQV 658
>gi|125539402|gb|EAY85797.1| hypothetical protein OsI_07159 [Oryza sativa Indica Group]
Length = 506
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 8/330 (2%)
Query: 73 LDRMAFSIAVSKLSQANHF-NAISQLLEELK-TRPDLRQNERFHVHSIVL--YGQANMID 128
+ R A ++ + +L + + +++LL +L+ R +++I++ Y + +
Sbjct: 150 VSRKALAVCLDRLVSSRRCPDVLTELLADLRDPRSKYLPQPNTCIYNILIKYYVKKGDLG 209
Query: 129 HAMQTFEEMDKYG---LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
A Q F+EM +R S+ + L+ G +E +F + + I P+ TY
Sbjct: 210 TAFQVFDEMRNMNCADVRPSLVTYSTLIGGLCRGAQMKEAFELFEDMIEKDRIVPDQLTY 269
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I FC G SI MR+ PNA ++ L+ G K+ + E V + M +
Sbjct: 270 NLLIGGFCRLGQVEKAQSIFGFMRKNECEPNAFNYATLINGHCKKGEVEAARGVFEEMIR 329
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y + LC+ +E L+ M +G K ++ TY L+ G K+ +
Sbjct: 330 SGVQPDAVSYTSLVGCLCRHGNVDEGINLVQEMWQKGCKADVVTYNLLLEGLCKDRRIAE 389
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A L + + G + + + + LC GE E A + + +G+VPH++ L+
Sbjct: 390 AVTLLEKLPSEGVQLNVASYRIVMNCLCSCGEMEKAAGLLGMMLGRGFVPHYAASNMLLI 449
Query: 366 GLASISKVAEAN-ELIGLMKKRFPKSGDMW 394
GL + +V++A L GL+ F W
Sbjct: 450 GLCDVGRVSDATVTLYGLVDTGFMPEARCW 479
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F + + GLR N L +K +E + G PN+ +YN VIKS C
Sbjct: 179 FARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLC 238
Query: 194 ESGDSSSVYSILAEMRRKSIR--PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
S ++ M ++ R P+ F ++ GF+K+ + ++ M + G+
Sbjct: 239 GDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPD 298
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN + +LCK + ++A+ +L M+ +G++P+ TY +IHG+ G+ + + K+F
Sbjct: 299 VVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFR 358
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
MT+ G P F F LC+ G + A ++ + KG +P + L+ G A+
Sbjct: 359 KMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEG 418
Query: 372 KVAEANELIGLMKKR 386
+ A+ N L M +
Sbjct: 419 RFADMNNLFHSMADK 433
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 3/251 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A+ + M K G R S D + N ++ G + + E + G+EP+ TYN
Sbjct: 246 ALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQ-KGVEPDVVTYNS 304
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ + C++ +L +M K + P+ + ++ G+ +++ K+ + M G
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ G+ +N + SLCK RS++A+ + M ++G P+L +Y L+HG+ EG
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF SM + G + +CF + + G + A+ V +G P T +L++
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAF 484
Query: 368 ASISKVAEANE 378
+ ++A+A E
Sbjct: 485 CRMGRLADAME 495
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A +M G+ A++ G S +++E ++F + G+ P
Sbjct: 311 KARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTS-KGLIPGI 369
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N + S C+ G S I M K P+ + +LL G+ E ++ D+ +
Sbjct: 370 VTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHS 429
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M GI + + +NI I + K +EA + M +G++P++ TY LI F + G
Sbjct: 430 MADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGR 489
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-PHFSTMK 361
L A + F+ M + G EP++ + + C G+ A ++ M+KG P+
Sbjct: 490 LADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFS 549
Query: 362 SLVTGLASISKVAEANELIGLM 383
S++ L + +V +A+++ L+
Sbjct: 550 SIIHSLCNEGRVMDAHDVFNLV 571
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 116/280 (41%), Gaps = 42/280 (15%)
Query: 96 QLLEELKTRPDLRQNERFH---VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
+L+ E+ ++ R N F +HS+ G+ + A F + G R ++ N+L
Sbjct: 530 ELVSEMMSKGIPRPNIVFFSSIIHSLCNEGR---VMDAHDVFNLVIHIGDRPTIVTFNSL 586
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G L E+ + V GIEP+ TYN ++ +C+SG + EM K
Sbjct: 587 IDGYCLVGKMEKAFGVLDAMVSV-GIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKK 645
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC--------- 263
++P + ++L G + + K+ M G A ++ Y I ++ LC
Sbjct: 646 VKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAI 705
Query: 264 --------------------------KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K++R EEA L + + G+ PN+ TY +IH
Sbjct: 706 TLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNL 765
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
KEG++E A +F+SM GC P S L Q G+
Sbjct: 766 LKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGD 805
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 40/343 (11%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++SI + + F ++ L + + + F++ I + + M+D AM
Sbjct: 403 DLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNI-LISAHAKRGMMDEAMLV 461
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F EM G+R V + L+ C + + + +++ F++ + G+EPN+ Y+ +I F
Sbjct: 462 FTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEK-FSQMISI-GLEPNTVVYHSLIHGF 519
Query: 193 CESGDSSSVYSILAEMRRKSI-RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C GD +++EM K I RPN F ++ E + D V ++ G
Sbjct: 520 CMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPT 579
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE------- 304
+ +N I C + + E+A +LD M+S GI+P++ TY L+ G+ K G ++
Sbjct: 580 IVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFR 639
Query: 305 ----------------------------GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
AKK+F M + G D + + LC+
Sbjct: 640 EMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRND 699
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ A+ + A + + +++ L + + EAN+L
Sbjct: 700 LTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDL 742
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 3/187 (1%)
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF-YKEHKYEDVGKVLQ 241
TY ++ C + + A + R +R + L + + E V +L
Sbjct: 157 HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLH 216
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG--IKPNLDTYKHLIHGFGK 299
M G YN I+SLC RS+EA ++ M G P++ ++ +IHGF K
Sbjct: 217 RMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 276
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+G + A L M G EPD + LC+ + A V R + KG P T
Sbjct: 277 QGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336
Query: 360 MKSLVTG 366
+++ G
Sbjct: 337 YTAIIHG 343
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 133/316 (42%), Gaps = 8/316 (2%)
Query: 45 TIARLKSESNP-FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT 103
+ R K P FR C A P D ++ + L + F + +LEE+
Sbjct: 210 VLQRFKHARKPAFRFF---CWAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGE 266
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
+ L E F + +I + +A A+ F+ M KYG + VD +N LL +K +
Sbjct: 267 K-GLLTMETFSI-AIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGK 324
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E + +F + + P+ +TY ++ +C + + EM + P+ ++
Sbjct: 325 EAQAVFEKLKDRF--TPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVM 382
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L G K K D K+ ++M+ G + V Y I IQ CK K EA D M+ RG
Sbjct: 383 LEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGC 442
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+P+ Y LI GFG++ ++ L M GC PD + + + A++
Sbjct: 443 QPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVR 502
Query: 344 VCRASMAKGWVPHFST 359
+ + + G P T
Sbjct: 503 IYKKMIQSGIKPTIHT 518
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 17/278 (6%)
Query: 82 VSKLSQANHFNAISQLLEELKTR--PDLRQNERFHVHSIVLYGQANMID--HAMQTFEEM 137
+ LS A + E+LK R P L+ ++I+L G + + A + + EM
Sbjct: 314 LDSLSTAKLGKEAQAVFEKLKDRFTPSLQ------TYTILLSGWCRLKNLLEAGRVWNEM 367
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES-- 195
G V A N +L G + K + ++F E K G PN +Y +I+ FC+
Sbjct: 368 IDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLF-EIMKAKGPSPNVRSYTIMIQDFCKQKL 426
Query: 196 -GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G++ + ++ + + +P+A + L+ GF ++ K + V +L+ M + G
Sbjct: 427 MGEAIEYFDVMVD---RGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRT 483
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I+ + ++A + M+ GIKP + TY ++ + N E +++ M
Sbjct: 484 YNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMH 543
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
GC PD + ++ L + A K + KG
Sbjct: 544 QKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKG 581
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 124/315 (39%), Gaps = 23/315 (7%)
Query: 4 LYRLRTNFNLKT-VNYRNLATSSLLSA--GDEAAALTIKEKKRATIA------------R 48
++ L + K V+ N SL +A G EA A+ K K R T + R
Sbjct: 294 IFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCR 353
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
LK+ R+ + P D +A ++ + L + + +L E +K +
Sbjct: 354 LKNLLEAGRVWNEMIDRGFNP----DVVAHNVMLEGLLKCKKKSDAIKLFEIMKAK-GPS 408
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
N R + I + + ++ A++ F+ M G + L+ G K + V +
Sbjct: 409 PNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSL 468
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
E + G P+ TYN +IK I +M + I+P + +++ ++
Sbjct: 469 LKEM-RERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYF 527
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK-PNL 287
YE ++ M + G N Y + I L + RS EA L+ ML +G+K P L
Sbjct: 528 VTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAPKL 587
Query: 288 DTYKHLIHGFGKEGN 302
D Y K GN
Sbjct: 588 D-YNKFASDISKTGN 601
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 141/342 (41%), Gaps = 40/342 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTF 134
AF + L++ + + +++ +K++ + I++ Y +A ++ A+ TF
Sbjct: 58 AFHTVIDSLAKIRQYQLMWDVVKVMKSK----RMVNVETFCIIMRKYARAQKVEEAVYTF 113
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT------------------------ 170
MDKY + ++ A N LL SKN + + IF
Sbjct: 114 NIMDKYDVPPNLAAFNGLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDP 173
Query: 171 EFPKVY---------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
PK G P+ TY ++ C++G I+ EM +P +
Sbjct: 174 NLPKAREIFREMVSNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYS 233
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ + E++ ED ME GI V VYN I + CK R + +L+ M +
Sbjct: 234 VLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCK 293
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G+ PN T+ ++ G + A ++F M CEPD+ + M C+ E + A
Sbjct: 294 GVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIK-VCEPDADTYTMMIKMFCERDELKKA 352
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LKV + K ++P T + L+ GL V +A L+ M
Sbjct: 353 LKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEM 394
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 4/189 (2%)
Query: 115 VHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
++S+++ YG N I+ A+ TF EM+ G+ V NAL+ + + V R+ E
Sbjct: 231 IYSVLVHTYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEM 290
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
G+ PNS T+N ++ S G++ Y + M K P+A + +++ F + +
Sbjct: 291 -DCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMI-KVCEPDADTYTMMIKMFCERDE 348
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ KV + M+ ++ + + I LC+ +A LL+ M+ +GI+P+ T+
Sbjct: 349 LKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGR 408
Query: 293 LIHGFGKEG 301
L KEG
Sbjct: 409 LRQLLIKEG 417
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 38/156 (24%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +AN + + + EMD G+ + N +L I +E R+F KV EP
Sbjct: 274 FCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLIGRGETDEAYRVFLRMIKV--CEP 331
Query: 181 NSETYNKVIKSFCE-----------------------------------SGDSSSVYSIL 205
+++TY +IK FCE GD + +L
Sbjct: 332 DADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLL 391
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
EM K IRP+ FG L KE + EDV K LQ
Sbjct: 392 EEMIEKGIRPSGVTFGRLRQLLIKEGR-EDVLKFLQ 426
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 4/318 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
L+ +I V+ L + F+ + L E++ ++ I Y + +++ A +
Sbjct: 116 LNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNT-LIGAYCREGLLEEAFE 174
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M GL+ S+ NA++ G Y K I E + G+ P++ TYN ++
Sbjct: 175 IMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI-GLSPDTTTYNTLLVES 233
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C + S I EM R+ + P+ F L+A F + + + M+K G+
Sbjct: 234 CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDN 293
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+Y + + C+ EA + D ML +G ++ Y +++G KE L A KLF
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 353
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G PD Y F + CQ G AL + + P +L+ G + +
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413
Query: 373 VAEANELIGLM--KKRFP 388
+ +A+EL M +K FP
Sbjct: 414 MEKASELWDGMISRKIFP 431
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 121/287 (42%), Gaps = 41/287 (14%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
LD +A++ ++ L + +L +E+ R L F+ + +++G Q + A
Sbjct: 326 LDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPD---FYTFTTLIHGHCQDGNMTKA 382
Query: 131 MQTFEEMDKYGLRQSVDALNALLLG-C----------------------------ILSKN 161
+ F M + ++ + A N L+ G C IL
Sbjct: 383 LSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINA 442
Query: 162 YEEVKRIFTEFPKVY------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
Y V + F +++ GI+P T N VIK +C SGDSS L M K + P
Sbjct: 443 YCSVGHVSEAF-RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAP 501
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + L+ GF +E + + MEK G+ + YN+ + C+ R +EA+ +L
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVL 561
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
M+ +GI P+ TY LI+G + NL A + M G PD
Sbjct: 562 RKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDD 608
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 6/286 (2%)
Query: 96 QLLEELKTRPD-LRQNERFHV--HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALN 150
+LE LK R + L Q V ++ +L G + M+ A + F+EM + G
Sbjct: 308 NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFT 367
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
L+ G N + +F + I+P+ YN +I FC+ G+ + M
Sbjct: 368 TLIHGHCQDGNMTKALSLFGTMTQ-RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 426
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+ I PN +G+L+ + + ++ +M + GI + N I+ C+ S +
Sbjct: 427 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 486
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L M+++G+ P+ +Y LI+GF +E N++ A M G PD + +
Sbjct: 487 ADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMN 546
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
C+ G + A V R + KG P ST +L+ G + + EA
Sbjct: 547 GFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEA 592
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 105/256 (41%), Gaps = 1/256 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA + + F + G S++A N+LL G + E + E + GIE
Sbjct: 58 YVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVR-SGIEL 116
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T N ++ + C+ G V S L+EM I + + L+ + +E E+ +++
Sbjct: 117 NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIM 176
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G+ + YN I LCK R AK +L ML+ G+ P+ TY L+ +
Sbjct: 177 NSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRR 236
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
N AK++F M G PD F + + AL R G VP
Sbjct: 237 DNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296
Query: 361 KSLVTGLASISKVAEA 376
L+ G + EA
Sbjct: 297 TVLMHGYCRNGNMLEA 312
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 110/268 (41%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I ++ + +D A+ F +M K+GL L+ G + N E +I E + G
Sbjct: 265 IAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE-QG 323
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ YN ++ C+ + + EM + P+ F L+ G ++
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M + I + YN I CK+ E+A L DGM+SR I PN TY LI+ +
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G++ A +L+ M G +P C+ G+ A + +AKG P
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 503
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
+ +L+ G + +A I M+K
Sbjct: 504 ISYNTLINGFVREDNMDKAFLWINKMEK 531
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL G K E +V + + + GI V NI + +LCK + ++ K+ L M G
Sbjct: 89 LLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNG 148
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
I ++ TY LI + +EG LE A ++ SM + G +P + + LC+ G Y A
Sbjct: 149 IYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAK 208
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + G P +T +L+ +EA E+ G M ++
Sbjct: 209 GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQ 252
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 130/268 (48%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + + A++ + M+ G++ ++ + L+ G + K++ +F + K G
Sbjct: 455 INMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIK-DG 513
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +IK+FC G+ ++ EM++K RP + F ++ GF + +
Sbjct: 514 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRAL 573
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ MM + G V+ +N + L + ++ E+A +LD M G+ P+ TY +++G+
Sbjct: 574 EIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGY 633
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A + F + N G E D + + C+ G ++AL V R A+ +
Sbjct: 634 AALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNT 693
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A V EA +L+ MK+
Sbjct: 694 FVYNILIDGWARRGDVWEAADLMQQMKQ 721
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 149/390 (38%), Gaps = 52/390 (13%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+LK +N F + + L P+ L +I + N AI + E K R
Sbjct: 495 KLKDWTNAFTVFEDVIKDGLKPDVVLYN---NIIKAFCGMGNMDRAIHMVKEMQKKRH-- 549
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R R + I + +A + A++ F+ M + G +V NAL+LG + + E+
Sbjct: 550 RPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVE 609
Query: 168 IFTEFPKVYGIEPNSETYNKV-----------------------------------IKSF 192
I E + G+ P+ TY + +K+
Sbjct: 610 ILDEMA-LAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKAC 668
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+SG S ++ EM ++I N + +L+ G+ + + ++Q M++ G+ +
Sbjct: 669 CKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDI 728
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y I + CK A + M + G+KPN+ TY LIHG+ E A + F
Sbjct: 729 HTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEE 788
Query: 313 MTNGGCEPDSYCFF-MFTYFLCQGGE-----YETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +PD + + T L + Y L +CR + T
Sbjct: 789 MKLAGLKPDKAVYHCLMTSLLSRATVAEAYIYSGILSICREMIESELTVDMGTAVYWSKC 848
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNA 396
L I EL ++K FP WNA
Sbjct: 849 LRKIE--GTGGELTEALQKTFPPD---WNA 873
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 9/272 (3%)
Query: 115 VHSIVLYGQANM--------IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
+SIV+ G A + +D A EM++ G+ +D + ++ G + N E+
Sbjct: 374 TYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCL 433
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+F K G P+ +Y +I + + G S + M I+ N + +L+ G
Sbjct: 434 IVFKRL-KECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLING 492
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
F K + + V + + K G+ V +YN I++ C + + A ++ M + +P
Sbjct: 493 FLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPT 552
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
T+ +IHGF + G + A ++F M GC P + F L + + E A+++
Sbjct: 553 SRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILD 612
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
G P T +++ G A++ +A E
Sbjct: 613 EMALAGVSPDEHTYTTIMNGYAALGDTGKAFE 644
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 129/315 (40%), Gaps = 8/315 (2%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R F + V ++ + Q E ++ R + + + I Y ++ A+
Sbjct: 302 RREFGLMVGYYARRGDMHRARQTFESMRVR-GIYPSSHVYTSLIHAYAVGRDMEEALSCV 360
Query: 135 EEMDKYGLRQSVDALNALLLG------CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+M + G+ S+ + ++ G S N + + + E + GI+ + Y+ +
Sbjct: 361 RKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEE-EGIDAPIDIYHTM 419
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + G+ + ++ P+ +G L+ + K K +V +MME GI
Sbjct: 420 MNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGI 479
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y++ I KLK A + + ++ G+KP++ Y ++I F GN++ A
Sbjct: 480 KHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH 539
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ M P S F + + GE AL++ G +P T +LV GL
Sbjct: 540 MVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLV 599
Query: 369 SISKVAEANELIGLM 383
++ +A E++ M
Sbjct: 600 EKRQMEKAVEILDEM 614
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 130/306 (42%), Gaps = 12/306 (3%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQS 145
+Q ++ A+ E +K +P R+ F + + Y + + A QTFE M G+ S
Sbjct: 282 TQPENWQAVVSAFERIK-KPARRE---FGL-MVGYYARRGDMHRARQTFESMRVRGIYPS 336
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS----- 200
+L+ + ++ EE + K G+E + TY+ V+ F + G++
Sbjct: 337 SHVYTSLIHAYAVGRDMEEALSCVRKM-KEEGVEMSLVTYSIVVGGFAKIGNADQSCNMD 395
Query: 201 -VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
S++ EM + I + ++ G+ E V + +++CG A V Y I
Sbjct: 396 RAESLVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLI 455
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
K+ + +A + M S GIK N+ TY LI+GF K + A +F + G +
Sbjct: 456 NMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLK 515
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + C G + A+ + + K P T ++ G A ++ A E+
Sbjct: 516 PDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEI 575
Query: 380 IGLMKK 385
+M++
Sbjct: 576 FDMMRR 581
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 126/326 (38%), Gaps = 44/326 (13%)
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKY 140
+K+ + + +S+++E + +++ +S+++ G + D +A FE++ K
Sbjct: 459 TKMGKVSKALEVSKMMESAGIKHNMK------TYSMLINGFLKLKDWTNAFTVFEDVIKD 512
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
GL+ V N ++ N + + E K P S T+ +I F +G+
Sbjct: 513 GLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRH-RPTSRTFMPIIHGFARAGEMRR 571
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYK----------------------EHKYE---- 234
I MRR P F L+ G + EH Y
Sbjct: 572 ALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMN 631
Query: 235 ------DVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
D GK + K G+ V Y +++ CK R + A A+ M ++ I
Sbjct: 632 GYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPR 691
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N Y LI G+ + G++ A L M G +PD + + F C+ G+ A K
Sbjct: 692 NTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTI 751
Query: 346 RASMAKGWVPHFSTMKSLVTGLASIS 371
+ A G P+ T +L+ G A S
Sbjct: 752 QEMEALGVKPNVKTYTTLIHGWACAS 777
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 94/234 (40%), Gaps = 29/234 (12%)
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
SK +EE + F KV +P E + V+ +F + +P
Sbjct: 263 SKWHEEREGSTKAFRKVLDTQP--ENWQAVVSAF-----------------ERIKKPARR 303
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+FGL++ + + + + M GI +VY I + + EEA + + M
Sbjct: 304 EFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKM 363
Query: 279 LSRGIKPNLDTYKHLIHGFGKEG------NLEGAKKLFASMTNGGCEP--DSYCFFMFTY 330
G++ +L TY ++ GF K G N++ A+ L M G + D Y M Y
Sbjct: 364 KEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGY 423
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ G E L V + G+ P + L+ + KV++A E+ +M+
Sbjct: 424 TMI--GNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMME 475
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 21/333 (6%)
Query: 73 LDRMAFSIAVS----KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
L +MAFS +V KL ++ L++ L + +++++ FH + Q N +
Sbjct: 113 LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVS 172
Query: 129 H---------------AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+ A++ ++ R V + ++ G K + F+E
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM- 231
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
GI PN TY+ +I FC +G +S+L EM K+I PN + +L+ KE K
Sbjct: 232 NARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKV 291
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ K+L M G + V YN + LCK + ++A AL M GI+PN TY L
Sbjct: 292 KEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTAL 351
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G K G L+ A+KLF + GC D + + LC+ G ++ AL + G
Sbjct: 352 IDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGC 411
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI-GLMKK 385
+P+ T ++ L + +A +L+ G++ K
Sbjct: 412 IPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAK 444
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 9/261 (3%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+++E+ TRPD+ ++S ++ G + +++ A F EM+ G+ +V + L+
Sbjct: 194 RMIEDRSTRPDVV------MYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLI 247
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G L+ + E + I PN TYN +I + C+ G +LAEM K
Sbjct: 248 WGFCLAGQLMGAFSLLNEMI-LKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQ 306
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+ + +L G K + + M+K GI Y I LCK R + A+
Sbjct: 307 PADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQK 366
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L +L +G ++ TY +I G KEG + A + + M + GC P++ F + L
Sbjct: 367 LFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLF 426
Query: 334 QGGEYETALKVCRASMAKGWV 354
+ E + A K+ +AKG +
Sbjct: 427 EKDENDKAEKLLHGMIAKGLL 447
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP------------------ 215
+V GIEPN T N +I FC G + +S+L ++ + +P
Sbjct: 92 EVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEV 151
Query: 216 -----------------NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
N +G LL G K + K+L+M+E V +Y+
Sbjct: 152 KRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTI 211
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I LCK K +A M +RGI PN+ TY LI GF G L GA L M
Sbjct: 212 IDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNI 271
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
P+ Y + + LC+ G+ + A K+ KG T S++ GL + +A
Sbjct: 272 NPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATA 331
Query: 379 LIGLMKK 385
L MKK
Sbjct: 332 LFMKMKK 338
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%)
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
L K+K A +L M +GI+PNL T LI+ F G + + + + G +PD
Sbjct: 75 LVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPD 134
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ LC GE + +L +A+G+ + + +L+ GL I + A +L+
Sbjct: 135 TITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLR 194
Query: 382 LMKKR 386
+++ R
Sbjct: 195 MIEDR 199
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 157/345 (45%), Gaps = 41/345 (11%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
E P D + + V L +A+ + + +EE++ + +R NE + + + + Q +D
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMR-QMGVRPNEVTYSNLVHGFRQHGELDR 246
Query: 130 AMQTFEEMDKYGLRQSVDA------LNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
++ FEE +K S++A L+AL L + + V+ + + G+ P+
Sbjct: 247 VIRFFEE-EKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEEL-----RQSGVVPDVV 300
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY+ +I +F +G + +L +MRR ++P+ + L+ KE K++D ++L++M
Sbjct: 301 TYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELM 360
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E G V YN + LCK + +E + + ML P++ TY +++G K G L
Sbjct: 361 EAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGML 420
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL-------------KVCRASMA 350
+ A KLF + + PD+ + M LC+ G+ E A +CRA
Sbjct: 421 DSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRA--- 477
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK---RFPKSGD 392
+ LV L + A ++ + ++ R KSGD
Sbjct: 478 ---------LAGLVAALCDAKRTDSARRIVEVARERGHRVTKSGD 513
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 136/318 (42%), Gaps = 8/318 (2%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
+ +D AF++ +KL + + F+ + +L L +R + + + L G A M + A
Sbjct: 15 AKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCG-AGMANQA 73
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ E+ +V N ++ G + + ++ + + I PN TY ++
Sbjct: 74 LELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVE-ESIVPNVFTYTILLN 131
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C S + + EM+R +PN +G L+ + + ++ +V+ + +
Sbjct: 132 GLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPT 191
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V + LCK R ++A ++ M G++PN TY +L+HGF + G L+ + F
Sbjct: 192 DVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFF 251
Query: 311 ---ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ G E +Y ++ LC+ G + A K G VP T L+
Sbjct: 252 EEEKARKGGSLEAAAYPGYLDA--LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTF 309
Query: 368 ASISKVAEANELIGLMKK 385
A + + EL+ M++
Sbjct: 310 ARAGQFDASLELLEDMRR 327
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 152/344 (44%), Gaps = 39/344 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+++ + KL+++ F+A+ +L +K +++ E + YG + A++ F
Sbjct: 76 SYAALLYKLARSRMFDAVETILAHMKDT-EMQCRESVFIALFQHYGP----EKAVELFNR 130
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV--------------------- 175
M ++ +++ + NALL I + ++E IF + ++
Sbjct: 131 MPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVTFNIMVKGRLAKGE 190
Query: 176 YG-------------IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+G ++P+ TYN +I C GD ++L +M +K N + L
Sbjct: 191 WGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGKHANEVTYAL 250
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K E+ K++ M G + + + + L K + EEAK+LL M R
Sbjct: 251 LMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVEEAKSLLHEMKKRR 310
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+KP++ TY LI+ KEG A K+ M GGC P++ + M LCQ G++E AL
Sbjct: 311 LKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVVDGLCQIGDFEVAL 370
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
V A + P T +V GL + + ++ M+KR
Sbjct: 371 SVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKR 414
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 5/224 (2%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F + K G +Y ++ S +V +ILA M+ ++ + F
Sbjct: 56 EEALSLFHRY-KEQGFRHYYPSYAALLYKLARSRMFDAVETILAHMKDTEMQCRESVFIA 114
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L + E E + M + + +N + L R +EA + G
Sbjct: 115 LFQHYGPEKAVE----LFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSYEMG 170
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+PN T+ ++ G +G A ++F M +P + FLC+ G+ + A+
Sbjct: 171 FRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAM 230
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ KG + T L+ GL S+ K EA +L+ M R
Sbjct: 231 ALLEDMGQKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYR 274
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE K + E K ++P+ TYN +I C+ G + Y +L EM+ PNA + +
Sbjct: 297 EEAKSLLHEMKK-RRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRM 355
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
++ G + +E VL M +N + L K + + +L+ M R
Sbjct: 356 VVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRK 415
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
++ +L++++ +I E +GA +L +T+
Sbjct: 416 LEFDLESWETIIKSACSEN--KGASELMTVLTS 446
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y M+D A + F EM + G+ V N L+ G K + E ++ + KV G+ P
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKV-GLSP 331
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +I FC+ G + + +++ + P + L+AG+ K ++
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME+ IA Y I I + +L +++A + M G+ P++ TY LIHG
Sbjct: 392 KEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVN 451
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN++ A K F S+ +P+S + + C+ G AL++ + G VP+ ++
Sbjct: 452 GNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASF 511
Query: 361 KSLVTGLASISKVAEANELIGLM 383
S + L K EA L+G M
Sbjct: 512 CSTMGLLCRDEKWKEAELLLGQM 534
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 12/246 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLL---EELKTRPDLRQNERFHVHSIVLYGQANMID- 128
L+ +F I ++ +A +F + +LL EE P++ +++ ++ G D
Sbjct: 156 LNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVV------IYTTLIDGCCKNGDV 209
Query: 129 -HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A F +MD+ GL + + L+ G E +++ + GI PN+ YN
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRS-GIVPNAYAYNC 268
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I +C G + + AEMR K I + +L+ G + K+ + K++ + K G
Sbjct: 269 LISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
++ + YNI I C + + + A L + + S G+ P L TY LI G+ K NL GA
Sbjct: 329 LSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGAL 388
Query: 308 KLFASM 313
L M
Sbjct: 389 DLVKEM 394
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 116/264 (43%), Gaps = 2/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
++N D A F + K + + + ++ GC + + V R+ + +G+ PN
Sbjct: 136 RSNYFDKAWWIFNVL-KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEE-FGLSPNV 193
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I C++GD ++ +M R + PN + +L+ GF+K+ + ++ +
Sbjct: 194 VIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYEN 253
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI YN I C ++A + M +GI + TY LI G +
Sbjct: 254 MNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKK 313
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A KL + G P+ + + C G+ +TA+++ + G P T +
Sbjct: 314 FGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNT 373
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ G + + +A A +L+ M++R
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEER 397
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 2/182 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ S+ + L++E++ R R + + I + + N D A +
Sbjct: 369 VTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTI-LIDAFARLNYTDKACEMHS 427
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M+K GL V + L+ G ++ N +E + F +++ ++PNS YN +I +C+
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMH-LQPNSVIYNTMIHGYCKE 486
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S +L EM + PN F + ++ K+++ +L M G+ V++Y
Sbjct: 487 GSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Query: 256 NI 257
+
Sbjct: 547 KM 548
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 6/316 (1%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D ++++ + L +A + +LL E+ R + NE I + Q +ID A
Sbjct: 344 SP-DTISYTTVLKGLCRAGRWEDAKELLNEM-VRKNCPPNEVTFNTFICILCQKGLIDQA 401
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ E+M +YG + NAL+ G + + +F P EPN+ TY ++
Sbjct: 402 ILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP----CEPNTITYTTLLT 457
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + + +LAEM + N F +L++ F ++ E+ +++Q M + G
Sbjct: 458 GLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTP 517
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ +N + + + SEEA LL G++S+GI + TY ++ +E +E A ++F
Sbjct: 518 NLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMF 577
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
++ + G P + + LC+ E + A+ ++ +P+ ST L+ GLA
Sbjct: 578 HAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLARE 637
Query: 371 SKVAEANELIGLMKKR 386
+ EA ++ + R
Sbjct: 638 GLLKEARYVLSELCSR 653
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM+ +EM G ++ N ++ G ++ ++I YG +P++ +Y V
Sbjct: 190 QAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSS-YGFQPDTVSYTTV 248
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + V + EM + PN F +L+ F + E +VL M + G
Sbjct: 249 LKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGC 308
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + NI I S+CK R ++A L+ M S G P+ +Y ++ G + G E AK+
Sbjct: 309 TANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKE 368
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M C P+ F F LCQ G + A+ + G T +LV G
Sbjct: 369 LLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFC 428
Query: 369 SISKVAEANEL 379
+V A EL
Sbjct: 429 VQGRVDSALEL 439
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 4/254 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + G V A N L+ G + +R+ P + P++ TY +I
Sbjct: 89 AARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP----VPPDAYTYTPLI 144
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ G S+L +M R+ +P+ + +LL K + KVL M G
Sbjct: 145 RGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCT 204
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN+ I +C+ R ++A+ +L+ + S G +P+ +Y ++ G E + L
Sbjct: 205 PNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVL 264
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M C P+ F M F C+GG E A++V G + + ++ +
Sbjct: 265 FCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICK 324
Query: 370 ISKVAEANELIGLM 383
+V +A E + M
Sbjct: 325 QGRVDDAFEFLNNM 338
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/385 (19%), Positives = 145/385 (37%), Gaps = 84/385 (21%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +++ + + +++ F ++L+E++ + P++ +++++ G + + +D A
Sbjct: 173 VTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIV------TYNVIINGMCREDRVDDA 226
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK---------------- 174
Q + YG + + +L G +K +E+V+ +F E +
Sbjct: 227 RQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286
Query: 175 ------------------VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+G N+ N VI S C+ G + L M P+
Sbjct: 287 FCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPD 346
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVL-----------------------------------Q 241
+ +L G + ++ED ++L +
Sbjct: 347 TISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIE 406
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + G + G+ YN + C R + A L + + +PN TY L+ G
Sbjct: 407 QMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAE 463
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
L+ A +L A M C + F + F CQ G E A+++ + M G P+ T
Sbjct: 464 RLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFN 523
Query: 362 SLVTGLASISKVAEANELI-GLMKK 385
+L+ G+ EA EL+ GL+ K
Sbjct: 524 TLLDGITEDCNSEEALELLHGLVSK 548
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 1/219 (0%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+P+ TY ++++ C+S +L EMR K PN + +++ G +E + +D +
Sbjct: 169 QPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQ 228
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L + G Y ++ LC KR E+ + L M+ PN T+ L+ F
Sbjct: 229 ILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFC 288
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+ G +E A ++ M+ GC ++ + +C+ G + A + + G P
Sbjct: 289 RGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTI 348
Query: 359 TMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNA 396
+ +++ GL + +A EL+ +++K P + +N
Sbjct: 349 SYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNT 387
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 234 EDVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+D+ + +++E+ G A V + I++LC+ R+ +A +L G ++ Y
Sbjct: 49 DDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAY 108
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
L+ G+ + G L+ A++L ASM PD+Y + LC G AL + +
Sbjct: 109 NTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ P T L+ + S +A +++ M+ +
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAK 201
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 3/215 (1%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P P + + ++ ++ L A +A ++LL E+ F+V + + Q ++
Sbjct: 444 PCEP-NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVL-VSFFCQKGFVE 501
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ ++M ++G ++ N LL G N EE + GI ++ TY+ +
Sbjct: 502 EAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVS-KGISLDTITYSSI 560
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + ++ +RP A + +L+ K + + M
Sbjct: 561 VDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSC 620
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ Y I I+ L + +EA+ +L + SRG+
Sbjct: 621 MPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 12/311 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-----LYGQANMID 128
D F+IA++ L + N + +L+ + Q +F + + LY A +
Sbjct: 391 DSATFNIAMNCLIKGFDLNEVCNILDRF-----VEQGMKFGFSTYLALIKALY-MAGKVT 444
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
F +M K GL +V + N ++ + ++ F E + GI PN T+N +
Sbjct: 445 EGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEM-QYKGIPPNLVTFNTL 503
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C+ G+ +L + +P+ F ++ G + + ED M G+
Sbjct: 504 IDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGL 563
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YNI I SLC + + LL M + GI P++ ++ LI F + G +E AKK
Sbjct: 564 SPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKK 623
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF+SM + G PD+Y + F CQ G + A ++ + A G +P T ++ L
Sbjct: 624 LFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALV 683
Query: 369 SISKVAEANEL 379
+ A ++
Sbjct: 684 KQDQFEAAQKI 694
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 10/278 (3%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
K+++ NH+ +Q++++ L N + I + + +M+D A TF+EM G+
Sbjct: 442 KVTEGNHY--FNQMVKD-----GLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIP 494
Query: 144 QSVDALNALLLGCILSKNYEEVK-RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
++ N L+ G K E K R +G +P+ T++ +I C +
Sbjct: 495 PNLVTFNTLIDG--YCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDAL 552
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+EM + PNA + +L+ K+L+ M+ GI V +N IQS
Sbjct: 553 GCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSF 612
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C++ + E+AK L MLS G+ P+ TY I F + G AK+LF SM GC PDS
Sbjct: 613 CRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDS 672
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+ + L + ++E A K+ + G + +F+ +
Sbjct: 673 FTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNFAAI 710
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 2/233 (0%)
Query: 153 LLGCILSKNY-EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
LL C+ SKN E + +F K+ G +P+S T+N + + D + V +IL +
Sbjct: 363 LLCCLSSKNMAREAGALLKKFGKI-GHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQ 421
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
++ + + L+ Y K + M K G+ V YN+ I CK ++A
Sbjct: 422 GMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKA 481
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
M +GI PNL T+ LI G+ K G + ++ L + G +PD + F
Sbjct: 482 TNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDG 541
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
LC+ + E AL + G P+ T L+ L I V + +L+ M+
Sbjct: 542 LCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQ 594
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
NM A ++ K G + N + I + EV I F + G++ T
Sbjct: 371 NMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVE-QGMKFGFST 429
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +IK+ +G + +M + + N + +++ F K + + M+
Sbjct: 430 YLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQ 489
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI + +N I CK +++ LL +L G KP++ T+ +I G + +E
Sbjct: 490 YKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIE 549
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A F+ M G P++ + + + LC G+ ++K+ R G P + +L+
Sbjct: 550 DALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALI 609
Query: 365 TGLASISKVAEANELIGLM 383
+ KV +A +L M
Sbjct: 610 QSFCRMGKVEDAKKLFSSM 628
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P++ YN VI + +S Y +M + +P+ + +L+ G + ++
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++++ ME G + V Y I I K+ +EA +L+ M +R + P+ T + IHG
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHG 331
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI P+ Y +I K +L+ A F M+ C+PD + + + + +C+ G + A
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L++ + G+ P+ T L+ G + KV EA ++ MK R
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKAR 316
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+L +++ R N +L+ + + + ++ + GI+ +YN I +L
Sbjct: 169 LLKDIKASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALV 228
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
K + A M + KP+ TY LIHG + G ++ A +L M G P+ +
Sbjct: 229 KSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVF 288
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + + + A +V A+ P +T++S + G+ +A EL
Sbjct: 289 TYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFEL 344
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 54/140 (38%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G N E +I S+ G + I ++ I P+ + ++ K +
Sbjct: 174 KASGYRINEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSL 233
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ Q M YNI I +C+ +EA L+ M G PN+ TY L
Sbjct: 234 DLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTIL 293
Query: 294 IHGFGKEGNLEGAKKLFASM 313
I GF ++ A ++ +M
Sbjct: 294 IDGFFNAKKVDEAFRVLETM 313
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + F+EM + G+ V +L+ N + +F E + G+ P+S TY
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTE-KGLSPSSYTYG 368
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G+ + ++ EM+ K + F L+ G+ ++ ++ + +ME+
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + V N +LKR +EAK L M+ G+K + +Y +LI + KEGN+E A
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM-AKGWVPHFSTMKSLVT 365
K+LF M++ G +P++ + + Y C+ G+ + A K+ RA+M A G P T SL+
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL-RANMEANGMDPDSYTYTSLIH 547
Query: 366 GLASISKVAEANELIGLM 383
G V EA L M
Sbjct: 548 GECIADNVDEAMRLFSEM 565
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 1/278 (0%)
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
+ L +ER + +V + ID ++ F M G++ +V +L ++ G
Sbjct: 181 VKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEV 240
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
E+ K++ EF V GI+P + TYN +I ++ + D S V +L M++ + N + L
Sbjct: 241 EKSKKLIKEFS-VKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL 299
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ K K D K+ M + GI S V+VY I C+ + A L D + +G
Sbjct: 300 LMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKG 359
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P+ TY LI G K G + A+ L M + G F C+ G + A
Sbjct: 360 LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ KG+ T ++ + + + EA + +
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 1/205 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + M+D A ++ M++ G + V N + K Y+E K+ + G++
Sbjct: 409 YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME-GGVKL 467
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ +Y +I +C+ G+ + EM K ++PNA + +++ + K+ K ++ K+
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME G+ Y I C +EA L M +G+ N TY +I G K
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCF 325
G + A L+ M G D+ +
Sbjct: 588 GKSDEAFGLYDEMKRKGYTIDNKVY 612
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 40/269 (14%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--G 177
+Y M + ++ F+ M K GL S+D + ++ + +K + F ++ G
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGL--SIDERSCIVF-LVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++ + V++ C G+ ++ E K I+P A + ++ + K+ + V
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
VL++M+K G+ VYN K+ TY L+
Sbjct: 280 GVLKVMKKDGV-----VYN-------KV-----------------------TYTLLMELS 304
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G + A+KLF M G E D + + + C+ G + A + KG P
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ G+ + ++ A L+ M+ +
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSK 393
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 5/308 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPD--LRQNERFHVHSIVLYGQANMIDHAMQTF 134
++ + + L +A + N L +K R + ++ +RF I YG+A + ++Q F
Sbjct: 120 SYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVF 179
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
M G+ SV N+LLL + + +F E YG+ P++ T+N +I+ FC+
Sbjct: 180 NSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCK 239
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK--CGIASGV 252
+ + EM R P+ + L+ G + K V+ M K + V
Sbjct: 240 NSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDV 299
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF-A 311
Y ++ C +EA + + M+S+G+KPN TY LI G + ++ K++F
Sbjct: 300 VTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEG 359
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
++ GG PD+ C G AL+V M P +T L+ L
Sbjct: 360 ALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRG 419
Query: 372 KVAEANEL 379
A +L
Sbjct: 420 NFERAEQL 427
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 134/318 (42%), Gaps = 9/318 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL-KTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
D + ++ V L +A N ++ + K +L + + + Y + ID A+
Sbjct: 261 DLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALV 320
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
FEEM GL+ + N L+ G + +++K+IF G P++ T N ++ +
Sbjct: 321 VFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAH 380
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ-------MMEK 245
C +G+ + + +M ++RP++ + +L+ + +E ++ ++
Sbjct: 381 CNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRD 440
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y + LC+ ++ +A+ + ++ RG + L ++K LI G +EG E
Sbjct: 441 DGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPL-SFKILIKGHCREGTFEA 499
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
+L M PD + L Q GE A + + VP ST S++
Sbjct: 500 GYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILA 559
Query: 366 GLASISKVAEANELIGLM 383
L + E+ I LM
Sbjct: 560 RLLAKGCAHESARFIMLM 577
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 7/272 (2%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL-LGCILSKNYEEVKRIFTEFPKVY 176
I +G + ID + FEEM + G++ + ++ C + KR F F ++
Sbjct: 8 IDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNT----KRAFALFDELT 63
Query: 177 --GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ N TY +I C++G+ + ++ EM+ + + N + L+ G+ K +
Sbjct: 64 EKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLID 123
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ KV +MEK G + + N L KL + EEAK L M+ +G+ PN+ +Y LI
Sbjct: 124 EAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLI 183
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ KEGN AKKLF M G EP++ + + + G + A ++ AKG
Sbjct: 184 DIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIF 243
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T SL+ G K+ +A EL ++++
Sbjct: 244 PDIYTYTSLLHGECIFGKLDDAVELFNEVRQK 275
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + + +A A L+ E++TR L N+ + I Y + +ID A +
Sbjct: 73 TYGALIDGVCKAGEMEAAEILVNEMQTRG-LDVNQLIYNTLIDGYCKRGLIDEAFKVQVI 131
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKR-IFTEFPKVYGIEPNSETYNKVIKSFCES 195
M+K G + LN + G EE KR + T K G+ PN +Y +I +C+
Sbjct: 132 MEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEK--GVVPNVVSYTTLIDIYCKE 189
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G+ + EM++ PNA + +L+ G K+ + ++ ++ M GI + Y
Sbjct: 190 GNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTY 249
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ C + ++A L + + +G+ N+ TY +I G KEG E A KL+ MT
Sbjct: 250 TSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTE 309
Query: 316 GGCEPDSYCF 325
G PD +
Sbjct: 310 AGLTPDDRVY 319
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 3/269 (1%)
Query: 113 FHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
HV+++V+ + A F+E+ + GL +V AL+ G + E + +
Sbjct: 36 IHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVN 95
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E + G++ N YN +I +C+ G + + M +K + + G K
Sbjct: 96 EM-QTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKL 154
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
++ E+ + L M + G+ V Y I CK EAK L M G +PN TY
Sbjct: 155 NQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTY 214
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI G K+G ++ A +L M G PD Y + + C G+ + A+++
Sbjct: 215 NVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQ 274
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANEL 379
KG + T ++++GL+ + EA +L
Sbjct: 275 KGLPLNVVTYTAIISGLSKEGRSEEAFKL 303
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ LL+ K ++V ++ + M + GI + ++VY + I CK+ ++ A AL D +
Sbjct: 4 YTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELT 63
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+G+ N+ TY LI G K G +E A+ L M G + + + C+ G +
Sbjct: 64 EKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLID 123
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
A KV KG+ T+ ++ GL +++ EA
Sbjct: 124 EAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEA 160
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 8/288 (2%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
V I G A FEEM GL+ A NALL G + + ++ + + +E +
Sbjct: 309 VAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMER 368
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ PN +TY+ +I ++ +G S +L EM +++PNA F +L+ + + +++
Sbjct: 369 S-GVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQ 427
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+VL+ ME G+ YN+ I + K + A A D MLS GI+P+ T+ LI
Sbjct: 428 KSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLI 487
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE--TALKVCRASM-AK 351
+ G + A++LF M GG P C F + G+ E +K A M ++
Sbjct: 488 DCHCRAGKHDRAEELFEEMMEGGYSP---CNTTFNIMINSFGDQERWDDVKNLLAHMRSQ 544
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
G VP+ T +L+ + +A E + MK S M+NA +
Sbjct: 545 GLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALI 592
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 2/299 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
FS +S + Q+L E++ +R + F+ I +G+ N +DHAM TF+
Sbjct: 412 VFSRILSSYRDKGEWQKSFQVLREMENS-GVRPDRVFYNVMIDTFGKFNCLDHAMATFDR 470
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ N L+ + ++ + +F E + G P + T+N +I SF +
Sbjct: 471 MLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEG-GYSPCNTTFNIMINSFGDQE 529
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
V ++LA MR + + PN+ + L+ + K ++ D + L M+ G+ +YN
Sbjct: 530 RWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYN 589
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + + SE+A + M G+KP+L LI+ FG++ A + M
Sbjct: 590 ALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKEN 649
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
+PD + L + +++ V + G P L + L + + E
Sbjct: 650 DLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALKYMKQTLE 708
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 9/286 (3%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS--KN 161
R + NE+ + I YG A + A +EM+ ++ NA + ILS ++
Sbjct: 368 RSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQP-----NAYVFSRILSSYRD 422
Query: 162 YEEVKRIFTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
E ++ F ++ G+ P+ YN +I +F + + M + I P+
Sbjct: 423 KGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVT 482
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ + K++ ++ + M + G + +NI I S +R ++ K LL M
Sbjct: 483 WNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMR 542
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
S+G+ PN TY LI +GK G A + M G +P S + Q G E
Sbjct: 543 SQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSE 602
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A+ RA G P + SL+ + AEA ++ MK+
Sbjct: 603 QAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKE 648
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ + T VI + G + +I EMR ++P + LL G+ K +D
Sbjct: 300 GLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDA 359
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
V+ ME+ G++ Y+ I + R E A+ +L M + ++PN + ++
Sbjct: 360 EFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSS 419
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +G + + ++ M N G PD + + + + A+ +++G P
Sbjct: 420 YRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPD 479
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
T +L+ K A EL M
Sbjct: 480 TVTWNTLIDCHCRAGKHDRAEELFEEM 506
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 145/316 (45%), Gaps = 12/316 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
LD +F I + +A LL EL+ + + +++ ++ G + I+ A
Sbjct: 161 LDVYSFGIVIKGCCEAGEIEKSFDLLVELR---EFGFSPNVVIYTTLIDGCCKRGEIEKA 217
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKV 188
F EM K+GL + L+ G L KN + K+ F + K+ G+ PN TYN V
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHG--LFKNGIK-KQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+ G + + + EMR + + N + L+ G +E K + KV+ M+ GI
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I C + + +A +L + SRG+ P+L TY L+ GF K+G+ GA K
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGL 367
+ M G +P + + + E A+++ R+ M + G P T L+ G
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL-RSPMEELGLTPDVHTYSVLIHGF 453
Query: 368 ASISKVAEANELIGLM 383
++ EA+ L LM
Sbjct: 454 CIKGQMNEASRLFKLM 469
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM + G+ ++ N L+ G E ++ + K GI PN TYN +I
Sbjct: 287 AFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-KSDGINPNLITYNTLI 345
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G S+ +++ + + P+ + +L++GF K+ GKV++ ME+ GI
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I I + ++ E+A L M G+ P++ TY LIHGF +G + A +L
Sbjct: 406 PSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M EP+ + C+ G AL++ R K P+ ++ + ++ L
Sbjct: 466 FKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCK 525
Query: 370 ISKVAEANELIGLM 383
K EA L+ M
Sbjct: 526 ERKSKEAEGLVEKM 539
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 7/294 (2%)
Query: 88 ANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQS 145
++ FN + E K + DL + IV+ G +A I+ + E+ ++G +
Sbjct: 142 SSSFNQWWRFFNESKIKVDLD----VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPN 197
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V L+ GC E+ K +F E K +G+ N TY +I ++G + +
Sbjct: 198 VVIYTTLIDGCCKRGEIEKAKDLFFEMGK-FGLVANEWTYTVLIHGLFKNGIKKQGFEMY 256
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
+M+ + PN + ++ K+ + +D K+ M + G++ + YN I LC+
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
++ EA ++D M S GI PNL TY LI GF G L A L + + G P +
Sbjct: 317 MKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ C+ G+ A KV + +G P T L+ A + + +A +L
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL 430
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 138/341 (40%), Gaps = 38/341 (11%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+S Q+ F + S LL + R + I Y Q+ +D ++ F EM
Sbjct: 65 VISGKIQSQFFTS-SSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDK 123
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G + N LL + S ++ + R F E K+ ++ + ++ VIK CE+G+
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKI-KVDLDVYSFGIVIKGCCEAGEIEK 181
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE-------DVGK--------------- 238
+ +L E+R PN + L+ G K + E ++GK
Sbjct: 182 SFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIH 241
Query: 239 -------------VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
+ + M++ G+ + YN + CK R+++A L D M RG+
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSC 301
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N+ TY LI G +E A K+ M + G P+ + C G+ AL +C
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
R ++G P T LV+G + A +++ M++R
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEER 402
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+ P+ TYN ++ FC+ GD+S ++ EM + I+P+ + +L+ F +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNM 424
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------- 286
E ++ ME+ G+ V+ Y++ I C + EA L M+++ ++PN
Sbjct: 425 EKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTM 484
Query: 287 ----------------------------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ +Y+++I KE + A+ L M + G
Sbjct: 485 VLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGI 544
Query: 319 EP 320
+P
Sbjct: 545 DP 546
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + +EM++ G++ S L+ N E+ ++ + ++ G+ P+ TY+ +I
Sbjct: 392 AGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEEL-GLTPDVHTYSVLI 450
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G + + M K + PN + ++ G+ KE ++ + ME+ +
Sbjct: 451 HGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
V Y I+ LCK ++S+EA+ L++ M+ GI P+ D+ +LI
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPS-DSILNLI 554
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 135/310 (43%), Gaps = 2/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A ++ + +L+ E+ R N I + + + +
Sbjct: 212 DIVSYNAVLKGLCMAKRWDDVEELMVEM-VRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G + ++ G ++E I + P YG++PN YN V+K C
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPS-YGLKPNVVCYNTVLKGLC 329
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +LAEM ++ + F +L+ F + + V ++L+ M + G V
Sbjct: 330 SAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI 389
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M + G KPN +Y ++ G + A++L + M
Sbjct: 390 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ F F+C+ G E A+++ + + G P + +++ GL K
Sbjct: 450 IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 509
Query: 374 AEANELIGLM 383
EA EL+ +M
Sbjct: 510 EEALELLNVM 519
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 137/302 (45%), Gaps = 12/302 (3%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMID 128
P + F+ ++ L + F + + L ++ PDLR +++ ++ G
Sbjct: 245 PPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR------MYATIIDGICKDGH 298
Query: 129 H--AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
H A M YGL+ +V N +L G ++ +EE + + E + + T+N
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ-EDCPLDDVTFN 357
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC++G V +L +M P+ + ++ GF KE ++ +L+ M C
Sbjct: 358 ILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSAC 417
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y I ++ LC+ +R +A+ L+ M+ +G PN T+ LI+ K+G +E A
Sbjct: 418 GCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQA 477
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L M GC PD + L + G+ E AL++ + KG P+ S+ +
Sbjct: 478 IELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASA 537
Query: 367 LA 368
L+
Sbjct: 538 LS 539
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 104/255 (40%), Gaps = 16/255 (6%)
Query: 141 GLRQSVDALNALLL-GCILSKN--------------YEEVKRIFTEFPKVYGIEPNSETY 185
G R +V AL L GC L +E + + P +G EP+ +Y
Sbjct: 158 GFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS-FGCEPDIVSY 216
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N V+K C + V ++ EM R PN F L+A + +E V + L M +
Sbjct: 217 NAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPE 276
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + +Y I +CK E A +L M S G+KPN+ Y ++ G E
Sbjct: 277 HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEE 336
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A+ L A M C D F + F CQ G + +++ + G +P T +++
Sbjct: 337 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 396
Query: 366 GLASISKVAEANELI 380
G V EA L+
Sbjct: 397 GFCKEGLVDEAVMLL 411
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 135/311 (43%), Gaps = 2/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L A + LL E+ + F++ + + Q ++D ++ E
Sbjct: 319 VCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL-VDFFCQNGLVDRVIELLE 377
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M ++G V ++ G +E + G +PN+ +Y V+K C +
Sbjct: 378 QMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM-SACGCKPNTISYTIVLKGLCRA 436
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+++ M ++ PN F L+ K+ E ++L+ M G + + Y
Sbjct: 437 ERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISY 496
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K ++EEA LL+ M+++GI PN Y + +EG + ++F S+ +
Sbjct: 497 STVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQD 556
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ E + A+ ++ G +P+ ST L+ GLAS V E
Sbjct: 557 ATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVRE 616
Query: 376 ANELIGLMKKR 386
A +L+ + R
Sbjct: 617 AQDLLSELCSR 627
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 114/282 (40%), Gaps = 39/282 (13%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+D G V A NA++ G + +R+ P + PN+ TY +++S C G
Sbjct: 67 LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP----VPPNAYTYFPIVRSLCARG 122
Query: 197 DSSSVYSILAEMR------------------------RKSIRP-----------NATDFG 221
+ ++L EM R ++R ++ +
Sbjct: 123 LIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCN 182
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+++ ++ ++ ++L+ + G + YN ++ LC KR ++ + L+ M+
Sbjct: 183 LVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRV 242
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G PN+ T+ LI + G E + + M GC PD + +C+ G +E A
Sbjct: 243 GCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVA 302
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + G P+ +++ GL S + EA +L+ M
Sbjct: 303 NDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 2/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++S ++ + + + +L+E++K + L+ N + I L + + A +
Sbjct: 703 DVISYSTVINGYCRFGELDKVWKLIEKMKQK-GLKPNSYTYGSIIGLLCRICKLAEAEEA 761
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM G+ L+ G + + F E I P+ TY +I FC
Sbjct: 762 FSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFC 820
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD + EM + + P+ F L+ G+ K +D +V M + G + V
Sbjct: 821 QIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVV 880
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I LCK + A LL M G++PN+ TY +++G K GN+E A KL
Sbjct: 881 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 940
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G D+ + C+ GE + A ++ + KG P T L+ G +
Sbjct: 941 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGML 1000
Query: 374 AEANELIGLM 383
+ +L+ M
Sbjct: 1001 EDGEKLLNWM 1010
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 152/339 (44%), Gaps = 18/339 (5%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVS-----KLSQANHFNAISQLLEEL 101
AR + +SN + +C LA S ++A S+ S KL+ F LL +
Sbjct: 534 ARSRRDSN---LESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLL--V 588
Query: 102 KTRPDLRQNER-FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
T D + R F V VL + M+ A + FE+M YGL SVD+ N L LSK
Sbjct: 589 YTYKDWGSDPRVFDVFFQVLV-EFGMLPEARKVFEKMLNYGLVLSVDSCNVYL--ARLSK 645
Query: 161 NYEEVKR---IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+ + +F EFP+V G+ N +YN VI C+ G + + +L M K P+
Sbjct: 646 DCNKTATAIIVFREFPEV-GVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDV 704
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ ++ G+ + + + V K+++ M++ G+ Y I LC++ + EA+
Sbjct: 705 ISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSE 764
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M+ +GI P+ Y L+ GF K G++ A K F M + PD + CQ G+
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
A K+ + +G P T L+ G + +A
Sbjct: 825 MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDA 863
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 135/313 (43%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ V + A S+ E+ +R D+ + + I + Q + A +
Sbjct: 773 DTIVYTTLVDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKL 831
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM GL + L+ G + + ++ R+ + G PN TY +I C
Sbjct: 832 FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLC 890
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD S +L EM + ++PN + ++ G K E+ K++ E G+ +
Sbjct: 891 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 950
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + + CK ++A+ +L ML +G++P + T+ L++GF G LE +KL M
Sbjct: 951 TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P++ F C + A + + ++G P T ++LV G + +
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070
Query: 374 AEANELIGLMKKR 386
EA L MK +
Sbjct: 1071 KEAWFLFQEMKGK 1083
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 128/315 (40%), Gaps = 8/315 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ +S Q +L E+ R PD+ + Y +A I A
Sbjct: 808 DVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL----MNGYCKAGHIKDA 863
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ M + G +V L+ G + + + E K+ G++PN TYN ++
Sbjct: 864 FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-GLQPNIFTYNSIVN 922
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+SG+ ++ E + + + L+ + K + + ++L M G+
Sbjct: 923 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ +N+ + C E+ + LL+ ML++GI PN T+ L+ + NL+ A ++
Sbjct: 983 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIY 1042
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G EPD + C + A + + KG+ ST L+ G
Sbjct: 1043 KDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKR 1102
Query: 371 SKVAEANELIGLMKK 385
K EA E+ M++
Sbjct: 1103 KKFVEAREIFDQMRR 1117
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 36/238 (15%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + EM K GL+ ++ N+++ G S N EE ++ EF + G+ ++ TY
Sbjct: 895 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYT 953
Query: 187 KVIKSFCESGDSSSVYSILAEMR-----------------------------------RK 211
++ ++C+SG+ IL EM K
Sbjct: 954 TLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1013
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
I PNAT F L+ + + + + + M G+ Y ++ C + +EA
Sbjct: 1014 GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEA 1073
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
L M +G ++ TY LI GF K A+++F M G D F F+
Sbjct: 1074 WFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFS 1131
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 18/236 (7%)
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEM--------RRKSIRPNATDF 220
F E PK+ E + ++ ++ ++ + G V+ + ++ + + ++
Sbjct: 568 FWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNY 627
Query: 221 GLLLA----GFYKEHKYEDVGK------VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
GL+L+ Y +D K V + + G+ V YNI I +C+L R E
Sbjct: 628 GLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINE 687
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A LL M +G P++ +Y +I+G+ + G L+ KL M G +P+SY +
Sbjct: 688 AHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIG 747
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A + + +G +P +LV G + A++ M R
Sbjct: 748 LLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSR 803
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/193 (19%), Positives = 78/193 (40%), Gaps = 34/193 (17%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNAL---------------LLGCILSKNYEEV 165
Y ++ +D A + EM GL+ ++ N L LL +L+K
Sbjct: 959 YCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1018
Query: 166 KRIFTEFPKVY-------------------GIEPNSETYNKVIKSFCESGDSSSVYSILA 206
F K Y G+EP+ +TY ++K C + + + +
Sbjct: 1019 ATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQ 1078
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
EM+ K + + + +L+ GF+K K+ + ++ M + G+A+ +++ + K K
Sbjct: 1079 EMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGK 1138
Query: 267 RSEEAKALLDGML 279
R + +D ++
Sbjct: 1139 RPDTIVDPIDEII 1151
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 145/325 (44%), Gaps = 7/325 (2%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANM 126
P SP A S + L +A ++A+ + ++ + L RF S + + +
Sbjct: 36 PTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVL---PRFTSLSALTESFVNTHH 92
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-IEPNSETY 185
A M K G +V LN +L G S ++ +F++ + Y + P+ TY
Sbjct: 93 PSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTY 152
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N ++ FC++ + + M++ RPN + +L+ + K + + +L+ ME
Sbjct: 153 NTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEME 212
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G+ + V VY+ I + C E + L D ML R + PN+ TY L+ G G+ G
Sbjct: 213 REGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWR 272
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A ++ MT G PD + + LC+ G A+KV + KG P T +V
Sbjct: 273 EASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVV 332
Query: 365 TGLASISKVAEANELIGLMKKRFPK 389
GL ++ +A ++ +M K+ K
Sbjct: 333 NGLCKEDRMDDAFGVVEMMVKKGKK 357
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 122/271 (45%), Gaps = 4/271 (1%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEF 172
++VL G ++ D AM F +M + D + N L+ G +K E + +F
Sbjct: 116 NLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAM 175
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K PN TY+ +I +C+SG+ +L EM R+ ++ + + L++ F E
Sbjct: 176 KKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGD 235
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E ++ M + ++ V Y+ +Q L + R EA +L M +RG++P++ Y
Sbjct: 236 IETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTV 295
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
L G K G A K+ M G EP + + + LC+ + A V + KG
Sbjct: 296 LADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKG 355
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P T +L+ GL K+ EA +L L+
Sbjct: 356 KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 125/305 (40%), Gaps = 38/305 (12%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ V+ +A L E +K D R N + I Y ++ + +
Sbjct: 148 DCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGL 207
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM++ GL+ V Y+ +I +FC
Sbjct: 208 LEEMEREGLKADV------------------------------------FVYSSLISAFC 231
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
GD + + EM R+ + PN + L+ G + ++ + ++L+ M G+ V
Sbjct: 232 GEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVV 291
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + LCK R+ +A +LD M+ +G +P TY +++G KE ++ A + M
Sbjct: 292 AYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMM 351
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW--VPHFSTMKSLVTGLASIS 371
G +PD+ + LC G+ A+ + + +++ + P T +L+ GL
Sbjct: 352 VKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEG 411
Query: 372 KVAEA 376
+V +A
Sbjct: 412 RVHDA 416
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 3/220 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK--SIRPNATDFGLLLAGFYKEHKYE 234
G N N V+K FC SG S+ ++M+R + P+ + L+ GF K +
Sbjct: 107 GFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLA 166
Query: 235 DVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ + + M+K G + Y++ I CK E LL+ M G+K ++ Y L
Sbjct: 167 EARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSL 226
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I F EG++E ++LF M P+ + L + G + A ++ + A+G
Sbjct: 227 ISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGV 286
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
P L GL + +A +++ LM ++ + G +
Sbjct: 287 RPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTL 326
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 12/276 (4%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEF 172
+++V+ G + + +D A E M K G + N LL G C K +E +
Sbjct: 328 YNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLL 387
Query: 173 PKVYGIEPNSETYNKVIKSFCESG---DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ + ++P+ T N +I+ C+ G D++ ++S + EM ++ N + L+ G+
Sbjct: 388 SEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEM---GLQGNIVTYNFLIEGYLA 444
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
K + K+ + + G + Y++ I LCK++ A+ L M GI+P +
Sbjct: 445 ARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVID 504
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y L+ +E +LE A+ LF M N D F + + G+ ++A ++
Sbjct: 505 YNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMF 564
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
VP T L+ SK+ +E +GL +K
Sbjct: 565 MMDLVPDAVTFSILIN---RFSKLGMLDEAMGLYEK 597
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 9/224 (4%)
Query: 110 NERFHVHSIVL--------YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
+E+FHV V + + A + M + GL+ ++ N L+ G + ++
Sbjct: 388 SEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARK 447
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
E +++ ++ G PNS TY+ +I C+ S + +M+ IRP D+
Sbjct: 448 LIEALKLW-KYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYN 506
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ +E E + Q M V +NI I K + AK LL M
Sbjct: 507 ALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMM 566
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ P+ T+ LI+ F K G L+ A L+ M + G P F
Sbjct: 567 DLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVF 610
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 145/315 (46%), Gaps = 8/315 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + F+I V+ L +A + + LL+ ++ + L H ++ ++ G + N +D A+
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVL---PNLHTYNTLISGLLRVNRLDDAL 424
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT-EFPKVYGIEPNSETYNKVIK 190
F M+ G+ + A +L K+ K + T E K+ GI PN N +
Sbjct: 425 DLFNNMETLGVVPT--AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLY 482
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
S E G I ++ + P++ + +++ + K + ++ ++L M +
Sbjct: 483 SLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEP 542
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ V N I +L K R +EA + + + P + TY LI G GKEG ++ A +LF
Sbjct: 543 DIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELF 602
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
ASMT GC P++ F LC+ E + ALK+ +P T +++ GL
Sbjct: 603 ASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIE 662
Query: 371 SKVAEANELIGLMKK 385
+V++A L MKK
Sbjct: 663 KRVSDAIWLFHQMKK 677
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 131/299 (43%), Gaps = 6/299 (2%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A AP D +++ + ++ N + +L E++ + N H I ++
Sbjct: 819 AGCAP----DVFTYNLLLDAHGKSGKINELFELYEQMIC-SSCKPNTITHNIIIANLVKS 873
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +D A+ F ++ + LL G + S EE K +F E YG PN+
Sbjct: 874 NSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVD-YGCRPNNAI 932
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I F ++GD ++ + M R+ IRP+ + L+ + + +D + ++
Sbjct: 933 YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK 992
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G+ YN+ I L + R EEA L D M SRGI P+L TY LI G G +E
Sbjct: 993 QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVE 1052
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A KL+ + G EP+ + + G ++A V + M G P+ T L
Sbjct: 1053 QAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 104/208 (50%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++P+ +T++ ++ + + D+ +V S+L EM ++PN + + + + + ++
Sbjct: 224 GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEA 283
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++++ ME G V Y + I +LC + ++A L M + KP+ TY ++
Sbjct: 284 CRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDK 343
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F G+L K+ ++ M G PD F + LC+ G + A + +G +P+
Sbjct: 344 FSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPN 403
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
T +L++GL ++++ +A +L M+
Sbjct: 404 LHTYNTLISGLLRVNRLDDALDLFNNME 431
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ +F F K G++P E+YN +I+ F + +++ EM+ P+ + LLL
Sbjct: 774 QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLD 833
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
K K ++ ++ + M +NI I +L K ++A L ++S P
Sbjct: 834 AHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSP 893
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
TY L+ G K G LE AK+LF M + GC P++ + + + G+ TA ++
Sbjct: 894 TPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELF 953
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ + +G P + SLV L +V +A
Sbjct: 954 KRMVREGIRPDLKSYTSLVGCLCEAGRVDDA 984
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 122/293 (41%), Gaps = 2/293 (0%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
+ LLEE+++ L+ N + I + G+A ID A + + M+ G V L
Sbjct: 247 TVKSLLEEMESL-GLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVL 305
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ + ++ +F + K +P+ TY ++ F + GD V +EM
Sbjct: 306 IDALCTAGKLDDAMELFVKM-KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
P+ F +L+ K ++ +L +M K G+ ++ YN I L ++ R ++A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L + M + G+ P TY I +GK G + A + F M G P+ Y L
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSL 484
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ G A + + G P T ++ + +V EA EL+ M +
Sbjct: 485 AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
VK ++E + G P+ T+ ++ + C++G+ + +L MR++ + PN + L+
Sbjct: 353 VKEFWSEM-EADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
+G + ++ +D + ME G+ Y + I K RS++A + M RGI
Sbjct: 412 SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA 471
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
PN+ ++ + G L AK +F + + G PDS + M + G+ + A+++
Sbjct: 472 PNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIEL 531
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
P + SL+ L +V EA
Sbjct: 532 LSDMSENQCEPDIIVINSLINTLYKAGRVDEA 563
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 1/250 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F EM G V N LL S E+ ++ + +PN+ T+N +I
Sbjct: 809 AWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMI-CSSCKPNTITHNIII 867
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ +S + ++ P +G LL G K + E+ ++ + M G
Sbjct: 868 ANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCR 927
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+YNI I K A L M+ GI+P+L +Y L+ + G ++ A
Sbjct: 928 PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F + G DS + + L + E AL + ++G P T SL+ L
Sbjct: 988 FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGV 1047
Query: 370 ISKVAEANEL 379
V +A +L
Sbjct: 1048 AGMVEQAGKL 1057
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 2/261 (0%)
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K G + +L+ G L EE + + ++ GI+P+ Y +I S C++G
Sbjct: 134 KLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM-GIKPDVVIYTTIIDSLCKNGHV 192
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ S+ +M IRP+ + L+ G ++ D +L+ M K I V +N
Sbjct: 193 DNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I + K + +AK L + M+ I PN+ TY LI+G EG L+ A+++F M GC
Sbjct: 253 IDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGC 312
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
PD + C+ + E A+K+ KG + T +L+ G + K A E
Sbjct: 313 FPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQE 372
Query: 379 LIGLMKKR-FPKSGDMWNAAL 398
+ G M R P + +N L
Sbjct: 373 VFGHMVSRGVPPNIRTYNVLL 393
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 4/263 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D+A+ F +M+ YG+R V +L+ G S + + + K I+P+ T+N
Sbjct: 192 VDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMK-RKIKPDVITFN 250
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F + G + EM + SI PN + L+ G E + ++ ++ +ME
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETK 310
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V Y I CK K+ E+A + M +G+ N TY LI GFG G A
Sbjct: 311 GCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVA 370
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK---GWVPHFSTMKSL 363
+++F M + G P+ + + + LC G+ AL + + G P+ T L
Sbjct: 371 QEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVL 430
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ GL K+ +A + G M+KR
Sbjct: 431 LHGLCYNGKLEKALMVFGDMQKR 453
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 11/318 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ V+ L + + LL + K +PD+ F+ + ++D A
Sbjct: 210 DVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVIT---FNALIDAFVKEGKLLD-A 265
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + EM + + ++ +L+ G + +E +++F + G P+ Y +I
Sbjct: 266 KELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY-LMETKGCFPDVVAYTSLIN 324
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC+ I EM +K + N + L+ GF K +V M G+
Sbjct: 325 GFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPP 384
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSR---GIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YN+ + LC + +A + + M R G+ PN+ TY L+HG G LE A
Sbjct: 385 NIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKAL 444
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+F M + + + +C+ G+ + AL + + +KG P+ T ++++GL
Sbjct: 445 MVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGL 504
Query: 368 ASISKVAEANELIGLMKK 385
+ EA+ L MK+
Sbjct: 505 FREGLMLEAHVLFRKMKE 522
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 35/248 (14%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
++ G+ + T N ++ FC+S S L ++ + P+ F L+ GF ++
Sbjct: 98 QIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRI 157
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCK----------------------------- 264
E+ ++ M + GI V +Y I SLCK
Sbjct: 158 EEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSL 217
Query: 265 ------LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
R +A LL GM+ R IKP++ T+ LI F KEG L AK+L+ M
Sbjct: 218 VNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSI 277
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
P+ + + LC G + A ++ KG P SL+ G KV +A +
Sbjct: 278 APNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMK 337
Query: 379 LIGLMKKR 386
+ M ++
Sbjct: 338 IFYEMSQK 345
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 4/194 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ AM+ F EM + GL + L+ G L + +F G+ PN TYN
Sbjct: 332 VEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVS-RGVPPNIRTYN 390
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIR---PNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
++ C +G + I +M+++ I PN + +LL G K E V M
Sbjct: 391 VLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDM 450
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+K + G+ Y I IQ +CK + ++A L + S+G+KPN+ TY +I G +EG +
Sbjct: 451 QKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLM 510
Query: 304 EGAKKLFASMTNGG 317
A LF M G
Sbjct: 511 LEAHVLFRKMKEDG 524
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 96/215 (44%), Gaps = 1/215 (0%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +++++ S + + + M P+ DF LL K K++ V + + ++
Sbjct: 39 YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+++ + N+ + C+ + A + L ++ G +P++ T+ LI+GF +E
Sbjct: 99 IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M G +PD + LC+ G + AL + G P SLV
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218
Query: 365 TGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
GL + + +A+ L+ G+MK++ +NA +
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 10/294 (3%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
+++ + L + + +L E+K PD F H I+ G++ I+ ++
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPD-----EFTYHLILDAMGKSMRIEDMLK 822
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM G + + N ++ G + SK +E ++ + G P TY ++
Sbjct: 823 IQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS-EGFSPTPCTYGPLLDGL 881
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ G+ ++ EM PN + +LL G+ E V ++ + M + G+ +
Sbjct: 882 LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + I +LC R + + + G++P+L TY LIHG GK G LE A L+
Sbjct: 942 KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND 1001
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G P+ Y + +L + G+ A K+ +AKGW P+ T +L+ G
Sbjct: 1002 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRG 1055
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A F+EM + G + N LL G ++ + E+V +F + G+ P+ ++Y
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE-QGMNPDIKSYT 945
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI + C G + S ++ + P+ + LL+ G K + E+ + MEK
Sbjct: 946 VVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKK 1005
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA + YN I L K ++ EA + + +L++G KPN+ TY LI G+ G+ E A
Sbjct: 1006 GIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENA 1065
Query: 307 KKLFASMTNGGCEPDSYCFFMF 328
+ M GGC P+S +
Sbjct: 1066 FAAYGRMIVGGCRPNSSTYMQL 1087
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 1/255 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
++ID A + F EM + G + +L S E++ +I E G + T
Sbjct: 780 DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHN-KGYKSTYVT 838
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I +S ++ ++ + P +G LL G K+ ED + M
Sbjct: 839 YNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML 898
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+CG +YNI + +E+ L + M+ +G+ P++ +Y +I +G L
Sbjct: 899 ECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN 958
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
F +T+ G EPD + + + L + G E AL + KG P+ T SL+
Sbjct: 959 DGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 1018
Query: 365 TGLASISKVAEANEL 379
L K AEA ++
Sbjct: 1019 LYLGKAGKAAEAGKM 1033
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 6/292 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + + + + ++ + ++ EE+ + + ++ ++ G ++ M+D A+
Sbjct: 800 DEFTYHLILDAMGKSMRIEDMLKIQEEMHNK---GYKSTYVTYNTIISGLVKSKMLDEAI 856
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++ G + LL G + N E+ + +F E + G EPN YN ++
Sbjct: 857 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLEC-GCEPNCAIYNILLNG 915
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+ +GD+ V + M + + P+ + +++ + + D + + G+
Sbjct: 916 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 975
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN+ I L K R EEA +L + M +GI PNL TY LI GK G A K++
Sbjct: 976 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ G +P+ + + G E A + G P+ ST L
Sbjct: 1036 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++ + G+ + NAL+ G + + + +F+E ++ G +P+ TY+ ++
Sbjct: 750 AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL-GCDPDEFTYHLIL 808
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ +S + I EM K + + +++G K ++ + + G +
Sbjct: 809 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS 868
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y + L K E+A+AL D ML G +PN Y L++G+ G+ E +L
Sbjct: 869 PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F SM G PD + + LC G L + G P T L+ GL
Sbjct: 929 FESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 988
Query: 370 ISKVAEANELIGLMKKR 386
++ EA L M+K+
Sbjct: 989 SGRLEEALSLYNDMEKK 1005
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P TY+ ++ +F + D+ +V +L EM + +RPN + + + + + E+
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ ME+ G V + IQ LC R +AK + M + KP+ TY L+
Sbjct: 261 YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK 320
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G G+ +++ ++ G + + LCQ G + AL V KG +P
Sbjct: 321 CGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQ 380
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ SL++G + A EL M P
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGP 412
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM+ G+R +V + + + EE RI + + G +P+ T +I+ C++
Sbjct: 231 EMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEE-EGCKPDVVTNTVLIQILCDA 289
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + + +M+ +P+ + LL V ++ ++ G V Y
Sbjct: 290 GRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSY 349
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ +LC++ R +EA + D M +GI P +Y LI GF K A +LF M
Sbjct: 350 TAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNI 409
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P+ Y +F + + GE ALK +KG VP +++ GLA ++
Sbjct: 410 HGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGM 469
Query: 376 ANELIGLMK 384
A + +K
Sbjct: 470 AKRVFHELK 478
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 123/309 (39%), Gaps = 37/309 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+++ +S +A+ FN +L + N HV I +G++ A++ +E
Sbjct: 383 SYNSLISGFLKADRFNRALELFNHMNIHGP-TPNGYTHVLFINYHGKSGESLKALKRYEL 441
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ V A NA+L G + KR+F E K GI P++ TY +IK ++
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL-KAMGISPDNITYTMMIKCCSKAS 500
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
++ I AEM P+ VL M N
Sbjct: 501 NADEAMKIFAEMIENRCAPD----------------------VLAM-------------N 525
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I L K R EA + + ++P TY L+ G G+EG ++ +L M +
Sbjct: 526 SLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSN 585
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
P+ + LC+ GE AL + + G +P S+ +++ GL ++ EA
Sbjct: 586 SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEA 645
Query: 377 NELIGLMKK 385
+ MKK
Sbjct: 646 FWMFCQMKK 654
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI N+ TYN +I +SG + M + P + +L+ F K E V
Sbjct: 166 GIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L ME G+ V Y I I+ L + R EEA +L M G KP++ T LI
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G L AK +F M +PD + G+ + ++ A A G+ +
Sbjct: 286 LCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDN 345
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + V L + +V EA ++ MK++
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQK 375
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F + + +E+ N +++ G V + M+R+ I+ N F
Sbjct: 82 EEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCT 141
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+ E L +M++ GI YN I L K EA + M + G
Sbjct: 142 VFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADG 201
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P + TY L+ FGK + E L M G P+ Y + + L Q G E A
Sbjct: 202 VVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAY 261
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
++ R +G P T L+ L ++A+A ++ MK
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMK 303
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 109/254 (42%), Gaps = 3/254 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+++A+ M G + + N ++ G + +E +F + KV + P+ T
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMKKV--LAPDYATVC 664
Query: 187 KVIKSFCESG-DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ SF SG +++++ + + + + + L+ G K E + + +
Sbjct: 665 TILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIAS 724
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ + I+ LCK K + A L+ + G+ +Y LI G E ++
Sbjct: 725 SGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDI 784
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++LF+ M GC+PD + + + + + E LK+ KG+ + T ++++
Sbjct: 785 AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844
Query: 366 GLASISKVAEANEL 379
GL + EA L
Sbjct: 845 GLVKSKMLDEAINL 858
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 109/246 (44%), Gaps = 1/246 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y N +A F M YG +V++ NA L +L + ++ F + I P
Sbjct: 139 YAHMNKFRNATDVFSRMKDYGFLPTVESCNAYL-SSLLDFHRVDIALTFYREMRRCRISP 197
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
NS T+N V+ + C+SG +L EM I PN + L+AG + K+
Sbjct: 198 NSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLK 257
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+M K G+ V +N I CK + EA M + PN TY LI+G+G+
Sbjct: 258 NLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQV 317
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN A K++ M G + D + LC+ G+ + A + + + VP+ ST
Sbjct: 318 GNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTY 377
Query: 361 KSLVTG 366
+L++G
Sbjct: 378 SALISG 383
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 3/261 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++ A++ EM+ G+ +V + N L+ G C +K + G+EPN T+
Sbjct: 215 LEKAVEVLREMESVGITPNVVSYNTLIAGHC--NKGLLSIATKLKNLMGKNGLEPNVVTF 272
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I FC+ G +EM+ ++ PN + L+ G+ + GKV + M +
Sbjct: 273 NSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMR 332
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ + + YN I LCK ++++A L+ + + PN TY LI G N +
Sbjct: 333 NGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDR 392
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +L+ SM GC P+ F M T + ++E A V A+ +T+ +
Sbjct: 393 AFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYD 452
Query: 366 GLASISKVAEANELIGLMKKR 386
GL K A +L M+ R
Sbjct: 453 GLCQCGKENLAMKLCHEMEAR 473
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQAN--MIDHAM 131
F++ +S L ++ ++L E+++ P++ ++ ++ G N ++ A
Sbjct: 201 TFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVS------YNTLIAGHCNKGLLSIAT 254
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ M K GL +V N+L+ G E R F+E KV + PN+ TYN +I
Sbjct: 255 KLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEM-KVMNVTPNTVTYNTLING 313
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+ + G+S+ + EM R ++ + + L+ G KE K + +++ ++K +
Sbjct: 314 YGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPN 373
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ Y+ I C K S+ A L M+ G PN T+K L F K + EGA +
Sbjct: 374 ASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLM 433
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
M DS LCQ G+ A+K+C A+ +P
Sbjct: 434 DMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLIP 477
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 90/212 (42%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K YG P E+ N + S + + EMRR I PN+ F L+L+ K K
Sbjct: 156 KDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKL 215
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E +VL+ ME GI V YN I C A L + M G++PN+ T+ L
Sbjct: 216 EKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSL 275
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
IHGF KEG L A + F+ M P++ + Q G A KV M G
Sbjct: 276 IHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGV 335
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ GL K +A L+ + K
Sbjct: 336 KADILTYNALILGLCKEGKTKKAAFLVKELDK 367
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 76/187 (40%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
++ + K++ + + + M+ P L+ H+ + + M
Sbjct: 131 VFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREM 190
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+C I+ +N+ + +LCK + E+A +L M S GI PN+ +Y LI G +G L
Sbjct: 191 RRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLL 250
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A KL M G EP+ F + C+ G+ A + P+ T +L
Sbjct: 251 SIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTL 310
Query: 364 VTGLASI 370
+ G +
Sbjct: 311 INGYGQV 317
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 108/260 (41%), Gaps = 2/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A FE+M + ++ +LL G E K + + + G EP+ YN
Sbjct: 101 VKEAASLFEDM-RIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREA-GFEPDIVVYN 158
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + +G Y +L EMRRK PN F L+ + K E+ +V M+ C
Sbjct: 159 NLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSC 218
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y I CK + + LLD M+ +G PN TY H++ K+ LE
Sbjct: 219 GCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEEC 278
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L M GC PD + + C+ GE + ++V A G P T ++ G
Sbjct: 279 IELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHG 338
Query: 367 LASISKVAEANELIGLMKKR 386
S + EA E M R
Sbjct: 339 FLSQRCLVEACEFFKEMVGR 358
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 38/302 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A + A +EM + +V + L+ K EE R+F E G
Sbjct: 164 YAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSC-GCPA 222
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TY +I FC+ G S Y +L M ++ PN + ++A K+ + E+ +++
Sbjct: 223 DAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELM 282
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G +N+YNI I+ CKL +E + + M + G+ P LDT+ +IHGF +
Sbjct: 283 EEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQ 342
Query: 301 -------------------------------------GNLEGAKKLFASMTNGGCEPDSY 323
LE +K +++ + GC+ + Y
Sbjct: 343 RCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVY 402
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ ++ + L G + A C M G +P T L+ GL + A E+ +
Sbjct: 403 AWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKV 462
Query: 384 KK 385
+K
Sbjct: 463 RK 464
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 6/241 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D + ++ +S + + +LL+ + + + N ++H + + + ++ +
Sbjct: 221 PADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHI-PNPMTYLHIMAAHEKKEELEECI 279
Query: 132 QTFEEMDKYGLRQSVDALNALL-LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ EEM K G ++ N ++ L C L + E V R++ E + G+ P +T+ +I
Sbjct: 280 ELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGV-RVWNEM-EATGLSPGLDTFVIMIH 337
Query: 191 SFCESGDSSSVYSILAEMRRKSI--RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
F EM + + P LL + K E V + G
Sbjct: 338 GFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGC 397
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V + I I +L +EA + M+ G+ P DT+ L+ G K N + A +
Sbjct: 398 DLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAE 457
Query: 309 L 309
+
Sbjct: 458 I 458
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 12/297 (4%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK--TRPDLRQNERFHVHSIVLY 121
G S PES + I + L + + N L ++ ++ ++ +RF I Y
Sbjct: 105 GFSHTPES------YFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSY 158
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
+A + +M+ F+ M + SV N+L+ + K ++ E YG+ P+
Sbjct: 159 AEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPD 218
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TYN +I+ FC++ + EM + + + L+ G + K ++
Sbjct: 219 TCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVN 278
Query: 242 -MMEKC-GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M +KC G+ V Y I+ C + EEA +L+ M SRG+KPN+ TY L+ G +
Sbjct: 279 GMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCE 338
Query: 300 EGNLEGAKKLFASM-TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
L+ K + M ++GG PD++ F + C G + ALKV SM K +P
Sbjct: 339 AHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFE-SMKKFRIP 394
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 116/271 (42%), Gaps = 10/271 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ A+ EEM GL+ ++ N L+ G + +++K + G P
Sbjct: 301 YCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSP 360
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ T+N +I C +G+ + M++ I ++ + L+ ++ Y+ ++
Sbjct: 361 DTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLF 420
Query: 241 Q-------MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ K G YN +SLC+ ++++A+ ++ ++ RG + + +Y +
Sbjct: 421 DELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQ-DPQSYTTV 479
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-FMFTYFLCQGGEYETALKVCRASMAKG 352
I G KEG E +L M PD + ++ FL Q + A + +
Sbjct: 480 IMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFL-QKDKPLLAKETLEKMLKSS 538
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ P ST S++ L E++ +I +M
Sbjct: 539 YQPKTSTWHSVLAKLLEKGCAHESSCVIVMM 569
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 119/310 (38%), Gaps = 44/310 (14%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D ++S + L Q ++ QL +EL + L
Sbjct: 394 PADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEIL------------------------ 429
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ K+G + + N + ++ +R+ + K +P S Y VI
Sbjct: 430 -----LSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQS--YTTVIMG 482
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G S Y +L M R+ P+ + L+ GF ++ K + L+ M K
Sbjct: 483 HCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPK 542
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD-TYKHLIHGFGKEGNLEGAKKLF 310
+ ++ + L + + E+ ++ ML + ++ N++ + + L FG+E + E A ++
Sbjct: 543 TSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQH-ERAFEII 601
Query: 311 ASMTNGGCEPDSYCFFM----FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G +++ FL + G+ A K+ S+ + +
Sbjct: 602 NLLYKNG-------YYVKIEEVAQFLLKRGKLSEACKLLLFSLENHQNVDIDLCNATILN 654
Query: 367 LASISKVAEA 376
L I+KV+EA
Sbjct: 655 LCKINKVSEA 664
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 1/265 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q N A+ + M + GL +V N ++ G +++ IF K GI
Sbjct: 695 FCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK-KGIVA 753
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I C SG + +L +M ++ I PN F L+ F KE + +
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLY 813
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + + + YN I C R +AK + D M+S+G P++ TY LI GF K
Sbjct: 814 KEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKS 873
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+E KLF MT+ G D++ + + CQ G+ A KV + G P T
Sbjct: 874 KRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTY 933
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
L+ L + K+ +A ++ ++K
Sbjct: 934 NILLDCLCNNGKIEKALVMVEDLQK 958
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 107/255 (41%), Gaps = 2/255 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ +M K G S+ +LL G L + + K G EPN YN +I
Sbjct: 119 ALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS-GYEPNVVVYNTLI 177
Query: 190 KSFCESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
C++GD + +L EM +K + + + LL G ++ ++L+ M K I
Sbjct: 178 DCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRI 237
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V + I + K +EA+ L ML I PN TY LI+G G L AKK
Sbjct: 238 NPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKK 297
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
F M + GC P+ + C+ E +K+ + +G V T +L+ G
Sbjct: 298 TFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYC 357
Query: 369 SISKVAEANELIGLM 383
+ K+ A ++ M
Sbjct: 358 QVGKLRVAKDIFSWM 372
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 109/267 (40%), Gaps = 7/267 (2%)
Query: 117 SIVLYGQA-------NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
SIV +G N I A M K G +V N L+ + + +
Sbjct: 134 SIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELL 193
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E K + + TYN ++ C SG+ IL +M ++ I P+ F L+ F K
Sbjct: 194 NEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVK 253
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ ++ ++ + M + I YN I LC R AK D M S+G PN+ T
Sbjct: 254 QGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVT 313
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y LI+GF K +E KLF M G D++ + + CQ G+ A + +
Sbjct: 314 YNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMV 373
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T L+ GL ++ A
Sbjct: 374 SCGVTPDIITHCILLHGLCVNGEIGSA 400
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 3/258 (1%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + +M K + V AL+ + N +E + ++ + + I PN+ TYN +
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS-SIGPNTVTYNSL 282
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C G M K PN + L+ GF K + ED K+ Q M + G+
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
YN I C++ + AK + M+S G+ P++ T+ L+HG G + A
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKGWVPHFSTMKSLVTGL 367
F M +G + + + LC+ + E A ++ CR + +G P T ++ GL
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPV-EGVKPDARTYTIMILGL 461
Query: 368 ASISKVAEANELIGLMKK 385
EA+EL MK+
Sbjct: 462 CKNGPRREADELFRRMKE 479
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 116/288 (40%), Gaps = 3/288 (1%)
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNA 151
+A E L++RP + V + + + N D + F +M+ G+ + +
Sbjct: 598 DAFGLFCEMLQSRPIPSIVDFTRVLTAI--AKMNKFDIVIYLFHKMENLGISHDLYSFTI 655
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
L+ + + + K+ G +P+ T ++ FC+ S++ M
Sbjct: 656 LIHCFCRCSRFSLALALLGKMMKL-GFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ PN + ++ G K + ++ MEK GI + YN I LC R +A
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
LL M+ R I PN+ + LI F KEGNL AK L+ M P+ +
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
C G A + ++KG P T +L+TG +V + +L
Sbjct: 835 FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 882
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 124/282 (43%), Gaps = 2/282 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ +S L + + ++LL ++ R + N F I + + + A
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEAKNL 812
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++EM + + ++ N+L+ G + + K +F + G P+ TYN +I FC
Sbjct: 813 YKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF-DLMVSKGCFPDVVTYNTLITGFC 871
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S + EM + + +A + L+ G+ + K KV M CG+ +
Sbjct: 872 KSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIV 931
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + LC + E+A +++ + + ++ TY +I G + ++ A LF S+
Sbjct: 932 TYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSL 991
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
T G + D+ + LC+ G A K+C G++P
Sbjct: 992 TRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMP 1033
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 116/294 (39%), Gaps = 37/294 (12%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A+ F EM + SV LL + YE V F++ +++GI + ++
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVI-YFSQQMELFGISHDLYSFTI 105
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC S SIL +M + P+ FG LL GF ++ D ++ M K G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 248 IASGVNVYNIRIQSLCK----------LKRSE--------------------------EA 271
V VYN I LCK L E +A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+L M R I P++ T+ LI F K+GNL+ A++L+ M P++ +
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLING 285
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC G A K +KG P+ T +L+ G +V + +L M +
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ + EM + P+ DF +L K +K++ V + ME GI+ + + I I
Sbjct: 600 FGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHC 659
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
C+ R A ALL M+ G +P++ T L++GF + + A L SM G EP+
Sbjct: 660 FCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPN 719
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ LC+ + AL++ KG V T +L++GL + + +A L+
Sbjct: 720 VVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLR 779
Query: 382 LMKKR 386
M KR
Sbjct: 780 DMVKR 784
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 1/185 (0%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ EM + P+ DF LL +YE V Q ME GI+ + + I I
Sbjct: 51 DLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCF 110
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C+ R A ++L M+ G P++ T+ L+HGF + A L ASM G EP+
Sbjct: 111 CRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNV 170
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKG-WVPHFSTMKSLVTGLASISKVAEANELIG 381
+ LC+ G+ AL++ KG T +L+TGL + +A ++
Sbjct: 171 VVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILR 230
Query: 382 LMKKR 386
M KR
Sbjct: 231 DMTKR 235
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 2/214 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI + ++ +I FC S ++L +M + +P+ G LL GF + +++++
Sbjct: 645 GISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEA 704
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G+ V +YN I LCK + A + GM +GI + TY LI G
Sbjct: 705 VSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG 764
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G A +L M +P+ F + G A + + + + P+
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM--KKRFP 388
T SL+ G ++ +A + LM K FP
Sbjct: 825 ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFP 858
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 30/275 (10%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
HA +TF+ M G +V N L+ G S+ E+ ++F + G+ ++ TYN +
Sbjct: 294 HAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR-EGLVGDTFTYNTL 352
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C+ G I + M + P+ +LL G + M
Sbjct: 353 IHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEK 412
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
G+ YNI I LCK + EEA L + G+KP+ TY +I G K G A +
Sbjct: 413 YLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 472
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQG-----GEYET-------ALKVC----RASMAKG 352
LF M G +CQ GE+ T + +C R+ M G
Sbjct: 473 LFRRMKEDG-------------IICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESG 519
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
+ ++ + +L + L + +A ++ + G +++
Sbjct: 520 DLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHL 554
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 85/207 (41%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ + +V+ + + V + +M I + F +L+ F + ++ +
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M K G + + C+ R +EA +L+D M G++PN+ Y +I+G K
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+L A ++F M G D+ + LC G + A ++ R + + P+
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+L+ + EA L M +R
Sbjct: 793 FTALIDTFVKEGNLLEAKNLYKEMIRR 819
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA ++ A + F M G+ + N +LL C+ + E + E + ++
Sbjct: 905 YCQAGKLNVAQKVFNRMVDCGVPPDIVTYN-ILLDCLCNNGKIEKALVMVEDLQKNQMDV 963
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I+ C + + + + RK ++ +A + +++G + + K+
Sbjct: 964 DIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLC 1023
Query: 241 QMMEKCGIASGVNVYN 256
M++ G +Y+
Sbjct: 1024 TRMKEDGFMPSERIYD 1039
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F++ K+ G+ PN TYN +I C+SG Y +M ++ + P+ + + + G
Sbjct: 278 LFSKMEKL-GVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGL 336
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K K ++ VL+ M + G VYN I CK+ EA + D MLS+GI PN
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T LI GF K + A+ + M G + F M +LC + TAL R
Sbjct: 397 VTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIRE 456
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + P+ + +LV+GL K EA EL
Sbjct: 457 MLLRNLRPNDGLLTTLVSGLCKAGKQGEAVEL 488
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 13/287 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMI 127
DR+ ++ +S + +L EE+ +PD+ + +++L+G A+ I
Sbjct: 534 FDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDI------YTFNLLLHGLCNADKI 587
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + + E K G +V ++ G + EE + + E +E NS YN
Sbjct: 588 DEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVS-KKLELNSVVYNS 646
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+++C +G+ ++ + + +M+ + + + + L+ G +D +L M K G
Sbjct: 647 LIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEG 706
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V Y I KL + + +L M S I PN TY +I GF K G + A
Sbjct: 707 LLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAA 766
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
KL MT G PD+ + FT LC+ G+ E A KVC M+ G V
Sbjct: 767 KLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCD-EMSSGAV 812
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 139/323 (43%), Gaps = 6/323 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F + KL + + N + + + EL P NE + I Y + I A++ ++
Sbjct: 331 VFINGLIKLEKIDEANCVLKEMSELGFVP----NEVVYNTLIDGYCKMGNISEALKIRDD 386
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ + LN+L+ G S + + + E G+ N +++ VI C
Sbjct: 387 MLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIG-RGLPINQGSFSMVINWLCLKF 445
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ + EM +++RPN L++G K K + ++ + G + N
Sbjct: 446 RFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSN 505
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I LCK +E LL ML RG+ + TY LI G KEG ++ +L M
Sbjct: 506 ALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G +PD Y F + + LC + + A ++ G+VP+ T ++ G +KV E
Sbjct: 566 GIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEG 625
Query: 377 NELIG-LMKKRFPKSGDMWNAAL 398
L+ L+ K+ + ++N+ +
Sbjct: 626 ENLLNELVSKKLELNSVVYNSLI 648
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 140/334 (41%), Gaps = 12/334 (3%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNER 112
+ + D C + P+ L FS ++ + + + L +E+L P++
Sbjct: 241 YEVYDFICLGGIIPDVHL----FSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNN 296
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+H + G+ +D A + E+M K + S+ + + G I + +E + E
Sbjct: 297 I-IHGLCKSGR---LDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEM 352
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
++ G PN YN +I +C+ G+ S I +M K I PN+ L+ GF K +
Sbjct: 353 SEL-GFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQ 411
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
VL+ M G+ +++ I LC R A + ML R ++PN
Sbjct: 412 IGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTT 471
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
L+ G K G A +L+ + G P+ + LC+ G + LK+ R + +G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
V T +L++G KV E EL M K+
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 135/306 (44%), Gaps = 2/306 (0%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P+++ +FS+ ++ L F + E+ R +LR N+ + +A A+
Sbjct: 428 PINQGSFSMVINWLCLKFRFVTALHFIREMLLR-NLRPNDGLLTTLVSGLCKAGKQGEAV 486
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ + + G ++ NAL+ G + N +E ++ + + G+ + TYN +I
Sbjct: 487 ELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLE-RGLVFDRITYNTLISG 545
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G + + EM +K I+P+ F LLL G K ++ ++ +K G
Sbjct: 546 CCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPN 605
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y + I CK + EE + LL+ ++S+ ++ N Y LI + GN+ A +L
Sbjct: 606 VYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRD 665
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G + + LC G + A + +G +P+ +++ G + +
Sbjct: 666 DMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLG 725
Query: 372 KVAEAN 377
++ + N
Sbjct: 726 QMNKVN 731
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EEM K G++ + N LL G + +E R++ E K G PN TY +I +C+
Sbjct: 560 EEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKK-NGYVPNVYTYGVMIDGYCK 618
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ ++L E+ K + N+ + L+ + ++ M+ G+
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCAT 678
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y+ + LC + ++AK LLD M G+ PN+ Y +I G+ K G + + M+
Sbjct: 679 YSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMS 738
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
+ P+ + + + C+ G+ + A K+ KG +P T + GL KV
Sbjct: 739 SHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVE 798
Query: 375 EA 376
EA
Sbjct: 799 EA 800
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +T ++ S ++ + Y + + I P+ F ++ F K H+ +D
Sbjct: 216 GLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDA 275
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ MEK G+A V YN I LCK R +EA + M+ + P+L TY I+G
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K ++ A + M+ G P+ + C+ G ALK+ ++KG P+
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T+ SL+ G ++ +A ++ M R
Sbjct: 396 SVTLNSLIQGFCKSDQIGQAENVLEEMIGR 425
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 3/257 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ EM LR + L L+ G C K E V+ K G PN T N +
Sbjct: 450 ALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK--GFVPNIVTSNAL 507
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C++G+ +L +M + + + + L++G KE K ++ ++ + M K GI
Sbjct: 508 IHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGI 567
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ +N+ + LC + +EA L G PN+ TY +I G+ K +E +
Sbjct: 568 QPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGEN 627
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L + + E +S + C G A ++ ++G + +T SL+ GL
Sbjct: 628 LLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLC 687
Query: 369 SISKVAEANELIGLMKK 385
+I V +A L+ M+K
Sbjct: 688 NIGLVDDAKHLLDEMRK 704
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++ V+S+LA +K + P+ LL+ K ++ + +V + GI V+++
Sbjct: 203 GFAADVFSLLA---KKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLF 259
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I + CK R ++A L M G+ PN+ TY ++IHG K G L+ A + M
Sbjct: 260 STMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVK 319
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
P + +F L + + + A V + G+VP+ +L+ G + ++E
Sbjct: 320 EKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISE 379
Query: 376 A 376
A
Sbjct: 380 A 380
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + + +AN LL EL ++ L N + I Y ++ A + ++
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELVSK-KLELNSVVYNSLIRAYCINGNMNAAFRLRDD 666
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ S ++L+ G ++ K + E K G+ PN Y +I + + G
Sbjct: 667 MKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRK-EGLLPNVVCYTTIIGGYSKLG 725
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ V +L EM +I PN + +++ GF K K ++ K+L M + GI YN
Sbjct: 726 QMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYN 785
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
LCK + EEA + D M S + + TY LI G
Sbjct: 786 AFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++ V + + F + L +E+ + +R +++ L + D A Q FE M
Sbjct: 111 YNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKD-AAQLFEAM 169
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ G+ S+ N L+ G + F + K G++P+ TYN++I FC + D
Sbjct: 170 RREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQM-KAAGLQPSVVTYNELIGGFCRARD 228
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ ++M+ + + P + +L+ F KE++ + ++L MEK G+ V Y +
Sbjct: 229 IAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGV 288
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ +LC + A+ L M S+G+KPN Y +I+G+G+EG+ A +L M G
Sbjct: 289 LLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSG 348
Query: 318 CEPDSYCFFMFTYFLCQGGEYETA 341
P+ + + LC G+ + A
Sbjct: 349 LIPNVASYCLTIRLLCNEGKCQEA 372
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V A AL+ GC S + E +R+F P++ G+ PN TY +I + G ++++
Sbjct: 38 VAACTALVHGCCQSGDVAEARRVFDVMPRL-GVTPNEVTYTALIHGYFVRGQREMGFALV 96
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
EMRR + PN + L+ + + +++ + M G+ V YNI I LC+
Sbjct: 97 GEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRH 156
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ ++A L + M GI P++ T+ LI G+GK G + A F M G +P +
Sbjct: 157 GKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTY 216
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ + A++ + P T L+ A +++ A E++ M+K
Sbjct: 217 NELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEK 276
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 4/271 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H + GQ M EM + G+ ++ N L+ + ++ + +F E P
Sbjct: 80 IHGYFVRGQREM---GFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMP- 135
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ G+ N +YN +I C G + MRR+ I P+ F LL+ G+ K K
Sbjct: 136 LKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMS 195
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ M+ G+ V YN I C+ + A M R + P TY LI
Sbjct: 196 NALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILI 255
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F KE ++ A ++ + M G E D + + + LC G+ A K+ ++ +KG
Sbjct: 256 GAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVK 315
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ ++ G +A LI M+K
Sbjct: 316 PNNVLYDMMIYGYGREGSSYKALRLIMEMRK 346
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM G+ ++V + N L+ G ++ ++F E + GI P+ T+N +I +
Sbjct: 131 FDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLF-EAMRREGIHPSMVTFNLLIDGYG 189
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G S+ +M+ ++P+ + L+ GF + + M++ +A
Sbjct: 190 KAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKV 249
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I I + K + A +L M G++ ++ +Y L+H EG + A+KLF SM
Sbjct: 250 TYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSM 309
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G +P++ + M Y + G AL++ G +P+ ++ + L + K
Sbjct: 310 DSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKC 369
Query: 374 AEANELIGLMK 384
EA LIG M+
Sbjct: 370 QEAEALIGDME 380
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+SGD + + M R + PN + L+ G++ + E ++ M + G
Sbjct: 44 LVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGG 103
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + YN + C+ + A+ L D M +G+ N+ +Y LI G + G L+ A
Sbjct: 104 VEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAA 163
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF +M G P F + + G+ AL A G P T L+ G
Sbjct: 164 QLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGF 223
Query: 368 ASISKVAEANELIGLMKKR 386
+A A MK+R
Sbjct: 224 CRARDIAHAIRAFSDMKER 242
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N +D A + EM+K GL V + LL + +++F G++P
Sbjct: 258 FAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDS-KGVKP 316
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ Y+ +I + G S ++ EMR+ + PN + L + E K ++ ++
Sbjct: 317 NNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALI 376
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
ME G+ + ++ + + +L S +
Sbjct: 377 GDMEDAGLQTSESICRVLFDAKARLHSSTD 406
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 12/288 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHA 130
+DR++++ +S + L+E+ R N + +SI++ G NM ++ A
Sbjct: 551 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN---YTYSILICGLFNMNKVEEA 607
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+Q +++ + G+ V + ++ GC ++ EE + F E ++PN+ YN +I+
Sbjct: 608 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS-KNVQPNTVVYNHLIR 666
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++C SG S + +M+ K I PN+ + L+ G + E+ + + M G+
Sbjct: 667 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 726
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I KL + + + LL M S+ + PN TY +I G+ ++GN+ A +L
Sbjct: 727 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 786
Query: 311 ASMTNGGCEPDSYCFFMFTY-FLCQGGEYETALKVCR----ASMAKGW 353
M G PDS + F Y +L QGG E A K A++ +GW
Sbjct: 787 NEMREKGIVPDSITYKEFIYGYLKQGGVLE-AFKGSDEENYAAIIEGW 833
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 36/235 (15%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NALL G + +E RI E G + +YN +I C + L EM
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILG-RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
++ ++P+ + +L+ G + +K E+ + ++ G+ V Y++ I CK +R+E
Sbjct: 581 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 640
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
E + D M+S+ ++PN Y HLI + + G L A +L M +
Sbjct: 641 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH-------------- 686
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
KG P+ +T SL+ G++ IS+V EA L M+
Sbjct: 687 ---------------------KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 720
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A+NA G EE ++F++ + G+ PN T+N VI G + +
Sbjct: 279 AINAFCKG----GKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 333
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + + P + +L+ G + + D VL+ M K G V VYN I S +
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+A + D M+S+G+ TY LI G+ K G + A++L M + G + F
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 453
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
LC +++AL+ + + P + +L++GL K ++A EL
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 505
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 113/264 (42%), Gaps = 4/264 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F + G+ S N LL + + +++ F K G+ P+ + I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK--GVSPDVYLFTTAI 280
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC+ G + ++M + PN F ++ G +Y++ + M + G+
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+I ++ L + KR +A +L M +G PN+ Y +LI F + G+L A ++
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 400
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + G S + C+ G+ + A ++ + ++ G+ + + S++ L S
Sbjct: 401 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 460
Query: 370 ISKVAEANELIG--LMKKRFPKSG 391
A +G L++ P G
Sbjct: 461 HLMFDSALRFVGEMLLRNMSPGGG 484
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G D A E+M + G+ ++ + L+ G +K + + E K G PN
Sbjct: 319 GMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPN 377
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
YN +I SF E+G + I M K + ++ + L+ G+ K + ++ ++L+
Sbjct: 378 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 437
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G + I LC + A + ML R + P LI G K G
Sbjct: 438 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 497
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
A +L+ N G D+ + LC+ G+ + A ++ + + +G V +
Sbjct: 498 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 557
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
+L++G K+ EA + M KR
Sbjct: 558 TLISGCCGKKKLDEAFMFLDEMVKR 582
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 3/263 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI++ G +A I A +EM K G +V N L+ I + + + I +
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLM 404
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G+ S TYN +IK +C++G + + +L EM N F ++ +
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ + + M ++ G + I LCK + +A L L++G + T L
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+HG + G L+ A ++ + GC D + C + + A + +G
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 354 VPHFSTMKSLVTGLASISKVAEA 376
P T L+ GL +++KV EA
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEA 607
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN+ Y+ VI +FC+ G S+L EM++KSI P+ + L+ K ++E+V
Sbjct: 210 KPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M I V +N I LCK + E+A+ ++ M+ +G+ P++ TY +I G+G
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
G ++ A+++F SM N EP+ + + + + + A++VCR KG P
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389
Query: 359 TMKSLVTGLASISKVAEANELIGLM 383
T L+ GL + + A M
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEM 414
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 13/310 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN------MIDH 129
++FS + L H++++ L E+ R VH +L N D
Sbjct: 73 VSFSKLLKALVHMKHYSSVVSLFREI-------HKLRIPVHEFILSIVVNSCCLMHRTDL 125
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
K G+ + N LL G ++ +F + + EPN Y V+
Sbjct: 126 GFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVM 185
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G + + +L M + S +PN + +++ F K+ + +L M++ I
Sbjct: 186 NGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIP 245
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+ I +LCKL + E + L M+ I PN+ T+ +I G KEG +E A+++
Sbjct: 246 PDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEI 305
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G +PD + M G+ + A ++ + + K P+ + L+ G A
Sbjct: 306 MRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYAR 365
Query: 370 ISKVAEANEL 379
K+ EA ++
Sbjct: 366 QKKIDEAMQV 375
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 98/199 (49%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I P+ TY+ +I + C+ +V ++ EM +I PN F ++ G KE K ED
Sbjct: 244 IPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAE 303
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++++ M + G+ V YN+ I + + A+ + D M+++ I+PN+ +Y LI+G+
Sbjct: 304 EIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGY 363
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++ ++ A ++ ++ G +P + + L + G ++A ++ G +P
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423
Query: 358 STMKSLVTGLASISKVAEA 376
T +L+ G V EA
Sbjct: 424 YTHCTLLGGYFKNGLVEEA 442
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 134/340 (39%), Gaps = 51/340 (15%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIV-LYGQANMIDHAMQT 133
+SI + + + + LL E+K + PD+ F +++ + + ++
Sbjct: 216 YSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDI-----FTYSTLIDALCKLSQWENVRTL 270
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSK--NYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F EM + +V N+++ G C K + EE+ R E G++P+ TYN +I
Sbjct: 271 FLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIE----KGVDPDVITYNMIID 326
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ G I M KSI PN + +L+ G+ ++ K ++ +V + + + G+
Sbjct: 327 GYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKP 386
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT--------------------- 289
+ N+ + L +L R++ A+ D MLS G P+L T
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446
Query: 290 --------------YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
Y +I G K G L+ A F + G PD + CQ
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G + A + R G + T +V G +KV+E
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 116/293 (39%), Gaps = 37/293 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A F +M + SV + + LL + K+Y V +F E K+ I + +
Sbjct: 53 LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLR-IPVHEFILS 111
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV---------- 236
V+ S C + +S+LA +K I N F LL G + E+K +D
Sbjct: 112 IVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRE 171
Query: 237 ----------GKV----------------LQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
G V L++ME+ +Y+I I + CK +
Sbjct: 172 NICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDG 231
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A +LL+ M + I P++ TY LI K E + LF M + P+ F
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVID 291
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC+ G+ E A ++ R + KG P T ++ G +V A E+ M
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 1/186 (0%)
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+S+ +M R P+ F LL Y V + + + K I + +I + S
Sbjct: 57 FSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVNS 116
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG-CEP 320
C + R++ ++L +GI N + L+ G E ++ A LF + CEP
Sbjct: 117 CCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEP 176
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + LC+ G + A + R P+ ++ + A L+
Sbjct: 177 NEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLL 236
Query: 381 GLMKKR 386
MK++
Sbjct: 237 NEMKQK 242
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/139 (18%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 105 PDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
PDL + H +L Y + +++ AM F ++++ ++ A++ G +
Sbjct: 421 PDL------YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKL 474
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
++ F + P + G+ P+ TY +I +C+ G +L +M + + +
Sbjct: 475 DKAHATFEKLPLI-GLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533
Query: 223 LLAGFYKEHKYEDVGKVLQ 241
++ GF + +K ++ L+
Sbjct: 534 IVRGFLRSNKVSEMKAFLE 552
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 12/288 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHA 130
+DR++++ +S + L+E+ R N + +SI++ G NM ++ A
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN---YTYSILICGLFNMNKVEEA 594
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+Q +++ + G+ V + ++ GC ++ EE + F E ++PN+ YN +I+
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS-KNVQPNTVVYNHLIR 653
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++C SG S + +M+ K I PN+ + L+ G + E+ + + M G+
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I KL + + + LL M S+ + PN TY +I G+ ++GN+ A +L
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 311 ASMTNGGCEPDSYCFFMFTY-FLCQGGEYETALKVCR----ASMAKGW 353
M G PDS + F Y +L QGG E A K A++ +GW
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLE-AFKGSDEENYAAIIEGW 820
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 36/235 (15%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NALL G + +E RI E G + +YN +I C + L EM
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILG-RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
++ ++P+ + +L+ G + +K E+ + ++ G+ V Y++ I CK +R+E
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
E + D M+S+ ++PN Y HLI +
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAY-------------------------------- 655
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
C+ G AL++ KG P+ +T SL+ G++ IS+V EA L M+
Sbjct: 656 ---CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 707
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A+NA G EE ++F++ + G+ PN T+N VI G + +
Sbjct: 266 AINAFCKG----GKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + + P + +L+ G + + D VL+ M K G V VYN I S +
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+A + D M+S+G+ TY LI G+ K G + A++L M + G + F
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
LC +++AL+ + + P + +L++GL K ++A EL
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 113/264 (42%), Gaps = 4/264 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F + G+ S N LL + + +++ F K G+ P+ + I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK--GVSPDVYLFTTAI 267
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC+ G + ++M + PN F ++ G +Y++ + M + G+
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+I ++ L + KR +A +L M +G PN+ Y +LI F + G+L A ++
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + G S + C+ G+ + A ++ + ++ G+ + + S++ L S
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 370 ISKVAEANELIG--LMKKRFPKSG 391
A +G L++ P G
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGG 471
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G D A E+M + G+ ++ + L+ G +K + + E K G PN
Sbjct: 306 GMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPN 364
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
YN +I SF E+G + I M K + ++ + L+ G+ K + ++ ++L+
Sbjct: 365 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 424
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G + I LC + A + ML R + P LI G K G
Sbjct: 425 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
A +L+ N G D+ + LC+ G+ + A ++ + + +G V +
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
+L++G K+ EA + M KR
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKR 569
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 3/263 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI++ G +A I A +EM K G +V N L+ I + + + I +
Sbjct: 333 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLM 391
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G+ S TYN +IK +C++G + + +L EM N F ++ +
Sbjct: 392 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 451
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ + + M ++ G + I LCK + +A L L++G + T L
Sbjct: 452 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 511
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+HG + G L+ A ++ + GC D + C + + A + +G
Sbjct: 512 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 571
Query: 354 VPHFSTMKSLVTGLASISKVAEA 376
P T L+ GL +++KV EA
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEA 594
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 137/319 (42%), Gaps = 12/319 (3%)
Query: 63 CGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIV 119
CG + ++F++ + + + + ++ E+ K PD+ + +
Sbjct: 160 CGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDV------FTYCTL 213
Query: 120 LYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+ G + + ID A+ +EM G S N L+ G + V ++ + G
Sbjct: 214 MDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM-FLKG 272
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
PN TYN +I C G S+L M PN +G L+ G K+ + D
Sbjct: 273 CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV 332
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L +E+ G + Y+ I L K ++SEEA L M+ +G +PN+ Y LI G
Sbjct: 333 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 392
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+EG L+ AK++ M N GC P+++ + + G + A++V + VP+
Sbjct: 393 CREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNE 452
Query: 358 STMKSLVTGLASISKVAEA 376
L+ GL K+ EA
Sbjct: 453 ICYSVLIHGLCEDGKLREA 471
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 24/247 (9%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +PN Y+ +I C G IL EM K PNA + L+ GF+K +
Sbjct: 377 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 436
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V + M K Y++ I LC+ + EA + ML RG++P++ Y +IHG
Sbjct: 437 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 496
Query: 297 FGKEGNLEGAKKLFASM--TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G++E KLF M +PD + + LC+ A+ + + + +G
Sbjct: 497 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 556
Query: 355 PHFST---------------------MKSLVTGLASISKVAEANELIGLMKKRF-PKSGD 392
P T + LV L ++ A ++I +M ++F P +
Sbjct: 557 PDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 616
Query: 393 MWNAALP 399
W +P
Sbjct: 617 TWERIIP 623
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL----YGQANMIDHAMQ 132
F + + + F + Q+ + +K R+ F + +L YG+A++ + A++
Sbjct: 66 TFYSLIENYANSGDFGTLFQVFDRMK-----RERRVFIEKNFILVFRAYGKAHLPEKAIE 120
Query: 133 TFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIF-TEFPKVYGIEPNSETYNKVIK 190
F M D++ R++V + N++L I + + I PN ++N VIK
Sbjct: 121 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIK 180
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C+ G + EM + P+ + L+ G KE + ++ +L M+ G
Sbjct: 181 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 240
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+N+ I LCK L+D M +G PN TY +I+G +G L+ A L
Sbjct: 241 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 300
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M C P+ + L + G + + + +G + +L++GL
Sbjct: 301 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 360
Query: 371 SKVAEANELIGLMKKRFPK 389
K EA +GL KK K
Sbjct: 361 EKSEEA---MGLWKKMVEK 376
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 105/255 (41%), Gaps = 38/255 (14%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+IF ++ + T+ +I+++ SGD +++ + M+R+ +F L+
Sbjct: 49 QIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRA 108
Query: 227 FYKEH----KYEDVGKVLQMME----------------------------KCGIASGVNV 254
+ K H E G+++ + +CG+ N+
Sbjct: 109 YGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNI 168
Query: 255 ------YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+N+ I+++CKL + A + M + +P++ TY L+ G KE ++ A
Sbjct: 169 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 228
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M GC P S F + LC+ G+ K+ KG VP+ T +++ GL
Sbjct: 229 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 288
Query: 369 SISKVAEANELIGLM 383
K+ +A L+ M
Sbjct: 289 LKGKLDKAVSLLDRM 303
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 129/275 (46%), Gaps = 5/275 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ FEE+ GL V + + L+ G + + E ++F E K G+ +
Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM-KEQGLHLDV 622
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN VI FC+SG Y +L EM+ K ++P +G ++ G K + ++ + +
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ G+ V +Y+ I K+ R +EA +L+ ++ +G+ PN T+ L+ K
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEE 742
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A+ F +M N C P++ + + LC ++ A + +G P+ T +
Sbjct: 743 IDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTT 802
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
++ GLA V EA L RF SG + ++A
Sbjct: 803 MIAGLAKAGNVMEARGLF----DRFKASGGVPDSA 833
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 2/252 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + L +A +L E+K + L + + I + ++ +D A Q
Sbjct: 586 DVRSYSILIHGLVKAGFSRETYKLFYEMKEQ-GLHLDVLAYNTVIDGFCKSGKVDKAYQL 644
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM GL+ +V +++ G +E +F E K G++ N Y+ +I F
Sbjct: 645 LEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE-AKSIGVDLNVVIYSSLIDGFG 703
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G Y IL E+ +K + PN+ + LL K + ++ Q M+ +
Sbjct: 704 KVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAM 763
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I I LC +++ +A M +G+KPN TY +I G K GN+ A+ LF
Sbjct: 764 TYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRF 823
Query: 314 TNGGCEPDSYCF 325
G PDS C+
Sbjct: 824 KASGGVPDSACY 835
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 127/283 (44%), Gaps = 7/283 (2%)
Query: 99 EELKTRPDLRQNERFHVHS----IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLL 154
E L+ ++RQ+ ++ + I + +A ++ A++ + M + GL ++ +N ++
Sbjct: 396 EALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMID 455
Query: 155 GCILSKNYEEVKRIFTEFP-KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
++ +E IF KV P+S T+ +I G YS+ +M
Sbjct: 456 RLCKAQKLDEACSIFLGLDHKV--CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQ 513
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PN + L+ F+K + ED K+ + M G + + + N + + K E+ +A
Sbjct: 514 IPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRA 573
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L + + ++G+ P++ +Y LIHG K G KLF M G D + C
Sbjct: 574 LFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFC 633
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G+ + A ++ KG P T S+V GLA I ++ EA
Sbjct: 634 KSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEA 676
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 3/256 (1%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++EM G + LN+ + C+ E R E K G+ P+ +Y+ +I
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYM-DCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
++G S Y + EM+ + + + + ++ GF K K + ++L+ M+ G+
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y + L K+ R +EA L + S G+ N+ Y LI GFGK G ++ A +
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILE 716
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASI 370
+ G P+SY + L + E + A +VC +M P+ T ++ GL I
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVKAEEIDEA-QVCFQNMKNLKCSPNAMTYSIMINGLCMI 775
Query: 371 SKVAEANELIGLMKKR 386
K +A M+K+
Sbjct: 776 RKFNKAFVFWQEMQKQ 791
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 7/307 (2%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQ 144
+++ + + + Q+LEE+ + V + + +++ + A E M K+ R
Sbjct: 143 MARTRNLDYLEQILEEMSV-AGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRP 201
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
+ A L+ + + + +F + ++ G E N + +++ F G + S+
Sbjct: 202 AFSAYTTLIGALSAANRPDPMLTLFHQMQEI-GYEANVHLFTTLVRVFAREGRIDAALSL 260
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L EM+ S + + + + F K K + K M+ G+ Y I LCK
Sbjct: 261 LDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCK 320
Query: 265 LKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+R +EA L + + L+R + P + Y +I G+G G + A L GC P
Sbjct: 321 ARRLDEAVELFEELDLNRSV-PCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVI 379
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ L + G+ E AL++ M + P+ +T L+ L ++ A ++ M
Sbjct: 380 AYNCILTCLGRKGKVEEALRI-HDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTM 438
Query: 384 KKR--FP 388
K+ FP
Sbjct: 439 KEAGLFP 445
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 104/240 (43%), Gaps = 1/240 (0%)
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
+ NA L+ ++N + +++I E V G ++ +++ SF +S + ++
Sbjct: 134 EVYNAFLMVMARTRNLDYLEQILEEM-SVAGFGLSNHVSVELVASFVKSHKLKEAFGVIE 192
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
MR+ RP + + L+ ++ + + + M++ G + V+++ ++ +
Sbjct: 193 MMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREG 252
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R + A +LLD M S +L Y I FGK G ++ A K F M G PD +
Sbjct: 253 RIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYT 312
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A+++ VP +++ G S K EA L+ K++
Sbjct: 313 TLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRK 372
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 4/225 (1%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +++F + G +P+ TY +I +FC+ G ++ +L M + +++PN + +
Sbjct: 355 EEAEKVFETMVE-KGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTM 413
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
++ GF K + E+ ++ Q + K GI YN I +LCKLK+ +EA LL M R
Sbjct: 414 IMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRK 473
Query: 283 --IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
++P++ TY +IHG GK G E A L A M + G PD + + L G+
Sbjct: 474 EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 533
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A+++ + G P T +LV L S V A +L+ M +
Sbjct: 534 AMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMR 577
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 126/264 (47%), Gaps = 1/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ ++ A FEEM + G + + A ++L+ G + +E +++ + G P +
Sbjct: 210 KAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKL-VDLMVARGPPPTA 268
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y ++ C+ G + EMRR+ +RP + ++ G+ K E V++
Sbjct: 269 VAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEE 328
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M A Y + I++L + R EEA+ + + M+ +G KP++ TY +I F KEG+
Sbjct: 329 MADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGS 388
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A + M +P+ Y + M + E AL++ + + G +P T +
Sbjct: 389 MAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNT 448
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
++ L + K+ EA EL+ M++R
Sbjct: 449 VINALCKLKKMDEALELLREMQRR 472
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 107/289 (37%), Gaps = 42/289 (14%)
Query: 138 DKYGLRQS------VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
D G QS V + N LL G ++E V + E K GI N T+ ++ +
Sbjct: 114 DALGFFQSSISEPNVSSFNILLRGFAARDDFEVVNALLREM-KSRGITSNGATHGVILSA 172
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C D S + P + +L+ G K HK E V + M + G
Sbjct: 173 LCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPD 232
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------------------------- 286
+ Y+ I L K R +EA+ L+D M++RG P
Sbjct: 233 IIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQ 292
Query: 287 ----------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+DTY ++ G+ G +E A + M + C PD+ + MF L G
Sbjct: 293 EMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIG 352
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
E A KV + KG P T ++ +A A ++ LM K
Sbjct: 353 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDK 401
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
EPN ++N +++ F D V ++L EM+ + I N G++L+ +
Sbjct: 125 EPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVS 184
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ + Y + + LCK + E A + + M+ +G KP++ Y LI G
Sbjct: 185 YFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLS 244
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G ++ A+KL M G P + + LC+ G + A+K + + P
Sbjct: 245 KAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVD 304
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T +VTG + KV +A ++ M R
Sbjct: 305 TYSFIVTGYIGMGKVEKAFAVMEEMADR 332
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%)
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V+ +NI ++ E ALL M SRGI N T+ ++ +L+ A F
Sbjct: 128 VSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFN 187
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
S++ CEP + + + LC+ + E A V + KG+ P SL+ GL+
Sbjct: 188 SVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAG 247
Query: 372 KVAEANELIGLMKKRFP 388
+V EA +L+ LM R P
Sbjct: 248 RVDEARKLVDLMVARGP 264
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 100/227 (44%), Gaps = 7/227 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + I + + A + +L L + ++ N +++++++ G +++ ++ A+
Sbjct: 372 DMHTYGIIIDNFCKEGSMAAATHVLR-LMDKAAVKPNR--YIYTMIMDGFVKSSRLEEAL 428
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-IEPNSETYNKVIK 190
+ ++ + K G+ S N ++ K +E + E + +EP+ TY+ +I
Sbjct: 429 ELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIH 488
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ G + +LAEM + P+ + L+ K ++L+ M K GI
Sbjct: 489 GLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFP 548
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ Y +Q LC+ + A LL M+ G PN T+K + GF
Sbjct: 549 DDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 109/243 (44%), Gaps = 1/243 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM G++ +V +L EE +++F E K +G+ PN TY+ +I +C
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMF-ELMKKHGVLPNLYTYSAMIDGYC 280
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G+ Y + E+ + PN FG L+ GF K + + M K G+ +
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VYN I CK EA LL M S + P++ TY LI+G E + A +LF M
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
N P S + + C+ E AL +C A G P+ T +L+ G ++ +
Sbjct: 401 KNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDI 460
Query: 374 AEA 376
A
Sbjct: 461 KAA 463
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 2/217 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ Y + + + G S +L EM I+PN + + + +++K E+
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ ++M+K G+ + Y+ I CK +A L +L + PN+ + L+ G
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K L A+ LF M G +P+ Y + + C+ G A+ + + P
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK--KRFPKSG 391
T L+ GL +VAEAN L MK + FP S
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSA 410
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 1/205 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A + A F M K+G+ ++ N L+ G S N E + +E + + P
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL-NLSP 372
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I C + + +M+ + I P++ + L+ G+ KE+ E +
Sbjct: 373 DVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLC 432
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G+ + ++ I C ++ + A L M +GI P++ TY LI KE
Sbjct: 433 SEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCF 325
N++ A +L++ M G P+ + F
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTF 517
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 71/186 (38%), Gaps = 1/186 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I AM + EM G+ V AL+ N +E R++++ + GI P
Sbjct: 454 YCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA-GIHP 512
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T+ ++ F + G S E ++ N F L+ G + +
Sbjct: 513 NDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFF 572
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M CGI + Y ++ + KR + L M+ GI PNL + L +
Sbjct: 573 SDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQAN 632
Query: 301 GNLEGA 306
G ++ A
Sbjct: 633 GYVKSA 638
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 125/266 (46%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G+ M++ + + +M + G+ ++ N L+ G + + + +R+F E + I+P
Sbjct: 197 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKP 255
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +IK +C++G + L +M + + + ++ Y + + +
Sbjct: 256 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 315
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M++ GI + +++ I LCK + E + + M+ +G KPN+ Y LI G+ K
Sbjct: 316 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++E A +L M + G +PD + + LC+ G E AL G +
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL +V EA L M ++
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEK 461
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 41/323 (12%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+ +++E + +PD+ + I Y +A AM+ +M+ G ++
Sbjct: 244 VFEVMESGRIKPDIVT----YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 299
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
C ++ ++ E + GI+ ++ VI C+ G + Y++ M RK
Sbjct: 300 QACYADSDFGSCVALYQEMDE-KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+PN + +L+ G+ K ED ++L M G V Y++ + LCK R EEA
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-------- 325
G+ N Y LI G GK G ++ A++LF M+ GC DSYC+
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 326 -----------------------FMFTYFLCQGGEY-----ETALKVCRASMAKGWVPHF 357
++TY + G + E ALK+ + KG P
Sbjct: 479 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 538
Query: 358 STMKSLVTGLASISKVAEANELI 380
+ ++L TGL KVA A +++
Sbjct: 539 ACFRALSTGLCLSGKVARACKIL 561
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 4/277 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
AFS+ + L + N + E + R + N + I Y ++ ++ A++
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENM-IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G + V + ++ G + EE F + G+ NS Y+ +I ++G
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC-RFDGLAINSMFYSSLIDGLGKAG 446
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNVY 255
+ EM K ++ + L+ F K K ++ + + ME+ G V Y
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + + K R+EEA L D M+ +GI P ++ L G G + A K+ +
Sbjct: 507 TILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAP 566
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
G D+ C M LC+ G + A K+ +G
Sbjct: 567 MGVILDAACEDMINT-LCKAGRIKEACKLADGITERG 602
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 6/248 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT-RPD-LRQNERFHVHSIVLYGQANMIDHAM 131
D + +S+ V+ L + + + L+ T R D L N F+ I G+A +D A
Sbjct: 396 DVVTYSVVVNGLCKNGR---VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ FEEM + G + NAL+ + +E +F + G + TY ++
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+ + + M K I P A F L G K K+L + G+
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
++ I +LCK R +EA L DG+ RG + +I+ K G + A KL
Sbjct: 573 AACEDM-INTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMH 631
Query: 312 SMTNGGCE 319
S G E
Sbjct: 632 SKIGIGYE 639
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N E Y ++ + D + + +E+++ + L+ F K E++ V
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 210
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ GI + YN + L + A+ + + M S IKP++ TY +I G+ K
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270
Query: 301 GNLEGAKKLFASMTNGGCEPD 321
G + A + M G E D
Sbjct: 271 GQTQKAMEKLRDMETRGHEAD 291
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 137/319 (42%), Gaps = 12/319 (3%)
Query: 63 CGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIV 119
CG + ++F++ + + + + ++ E+ K PD+ + +
Sbjct: 176 CGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDV------FTYCTL 229
Query: 120 LYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+ G + + ID A+ +EM G S N L+ G + V ++ + G
Sbjct: 230 MDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM-FLKG 288
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
PN TYN +I C G S+L M PN +G L+ G K+ + D
Sbjct: 289 CVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGV 348
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L +E+ G + Y+ I L K ++SEEA L M+ +G +PN+ Y LI G
Sbjct: 349 HLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGL 408
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+EG L+ AK++ M N GC P+++ + + G + A++V + VP+
Sbjct: 409 CREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNE 468
Query: 358 STMKSLVTGLASISKVAEA 376
L+ GL K+ EA
Sbjct: 469 ICYSVLIHGLCEDGKLREA 487
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 24/247 (9%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +PN Y+ +I C G IL EM K PNA + L+ GF+K +
Sbjct: 393 GCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKA 452
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V + M K Y++ I LC+ + EA + ML RG++P++ Y +IHG
Sbjct: 453 IRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHG 512
Query: 297 FGKEGNLEGAKKLFASM--TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G++E KLF M +PD + + LC+ A+ + + + +G
Sbjct: 513 LCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCN 572
Query: 355 PHFST---------------------MKSLVTGLASISKVAEANELIGLMKKRF-PKSGD 392
P T + LV L ++ A ++I +M ++F P +
Sbjct: 573 PDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAS 632
Query: 393 MWNAALP 399
W +P
Sbjct: 633 TWERIIP 639
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 133/319 (41%), Gaps = 14/319 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL----YGQANMIDHAMQ 132
F + + + F + Q+ + +K R+ F + +L YG+A++ + A++
Sbjct: 82 TFYSLIENYANSGDFGTLFQVFDRMK-----RERRVFIEKNFILVFRAYGKAHLPEKAIE 136
Query: 133 TFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIF-TEFPKVYGIEPNSETYNKVIK 190
F M D++ R++V + N++L I + + I PN ++N VIK
Sbjct: 137 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIK 196
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C+ G + EM + P+ + L+ G KE + ++ +L M+ G
Sbjct: 197 AMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFP 256
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+N+ I LCK L+D M +G PN TY +I+G +G L+ A L
Sbjct: 257 SSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLL 316
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M C P+ + L + G + + + +G + +L++GL
Sbjct: 317 DRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKE 376
Query: 371 SKVAEANELIGLMKKRFPK 389
K EA +GL KK K
Sbjct: 377 EKSEEA---MGLWKKMVEK 392
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 38/254 (14%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
IF ++ + T+ +I+++ SGD +++ + M+R+ +F L+ +
Sbjct: 66 IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 125
Query: 228 YKEH----KYEDVGKVLQMME----------------------------KCGIASGVNV- 254
K H E G+++ + +CG+ N+
Sbjct: 126 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNIS 185
Query: 255 -----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+N+ I+++CKL + A + M + +P++ TY L+ G KE ++ A L
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLL 245
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M GC P S F + LC+ G+ K+ KG VP+ T +++ GL
Sbjct: 246 LDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCL 305
Query: 370 ISKVAEANELIGLM 383
K+ +A L+ M
Sbjct: 306 KGKLDKAVSLLDRM 319
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 3/253 (1%)
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++++++G + +D A+ + E L +V ++ G + EE +++FTE
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL- 622
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+E NS YN +I+++C +G++ + + +MR K I P + L+ G +
Sbjct: 623 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
ED ++ M K G+ V Y I CKL + ++ +L M S I PN TY +
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G+ K G+++ A KL M G PD+ + + T C+ G+ E K+C +G
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802
Query: 354 VPHFSTMKSLVTG 366
T +LV G
Sbjct: 803 PLDEITYTTLVHG 815
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 6/306 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S+ ++ L + FN + +L+E + NE + I Y + + A++
Sbjct: 317 ITYSVLINGLMKLEKFNEANSVLKETLEK-GFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSFCE 194
+M G+ + LN+++ G E+ + I E + + I P + + +I C
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA--FTTIIHWLCM 433
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV-LQMMEKCGIASGVN 253
+ S L EM +++RPN L+ G KE K+ D ++ +++EK G + +
Sbjct: 434 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLV 492
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
N I LCK +EA LL ML RG + TY LI G KEG +E KL M
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G EPD++ + + + +C+ G+ + A+ + ++ VP+ T ++ G K+
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612
Query: 374 AEANEL 379
E +L
Sbjct: 613 EEGEKL 618
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSV----DALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+AN ++ + FE M + G+ V A+NA G E+ ++F + K+ G+
Sbjct: 224 KANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKG----GKVEDAIQLFFDMEKL-GV 277
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN TYN +I C+ G+ + +M + + + +L+ G K K+ +
Sbjct: 278 SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANS 337
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
VL+ + G VYN I CK+ +A + M+S+GI PN T +I GF
Sbjct: 338 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 397
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G +E A+ + M + G + F ++LC +E+AL+ R + + P+
Sbjct: 398 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 457
Query: 359 TMKSLVTGLASISKVAEANEL-IGLMKKRF 387
+ +LV GL K ++A EL L++K F
Sbjct: 458 LLTTLVGGLCKEGKHSDAVELWFRLLEKGF 487
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A++ ++M + G N L+ GC EE ++ E K GIEP++ TYN
Sbjct: 507 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK-QGIEPDTFTYN 565
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G ++ E + + + PN +G+++ G+ K K E+ K+ +
Sbjct: 566 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 625
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ VYN I++ C+ + EA L D M S+GI P TY LIHG G +E A
Sbjct: 626 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 685
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K L M G P+ C+ C+ G+ + + V + + P+ T ++ G
Sbjct: 686 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 745
Query: 367 LASISKVAEANELI 380
+ + A +L+
Sbjct: 746 YSKSGDMKTAAKLL 759
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 3/259 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A++ EM +R + L L+ G C K+ + V+ F K +G N T N
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG--ANLVTTN 495
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++G+ +L +M + + + L++G KE K E+ K+ M K
Sbjct: 496 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 555
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI YN+ I +C++ + +EA L + SR + PN+ TY +I G+ K +E
Sbjct: 556 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 615
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+KLF + E +S + C+ G A K+ +KG P +T SL+ G
Sbjct: 616 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 675
Query: 367 LASISKVAEANELIGLMKK 385
+ +I ++ +A LI M+K
Sbjct: 676 MCNIGRMEDAKCLIDEMRK 694
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 135/352 (38%), Gaps = 45/352 (12%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D FS A++ + QL +E+L P++ +H + +G +D A
Sbjct: 245 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNL-IHGLCKHGN---LDEA 300
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ E+M K G+ ++ + L+ G + + + E + E + G PN YN +I
Sbjct: 301 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE-KGFTPNEVVYNTLID 359
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C+ G+ I +M K I PN+ ++ GF K + E +L+ M G +
Sbjct: 360 GYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI 419
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------------------------ 286
+ I LC R E A L ML R ++PN
Sbjct: 420 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 479
Query: 287 -----------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
L T LIHG K GN++ A +L M G D + C+
Sbjct: 480 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 539
Query: 336 GEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ E K+ R M K G P T L+ G+ I K+ EA L K R
Sbjct: 540 GKVEEGFKL-RGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 590
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 7/310 (2%)
Query: 79 SIAVSKLSQANHFNAISQLLEELK--TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ +S L +AN + E ++ PD+ +I + + ++ A+Q F +
Sbjct: 216 TFLLSSLVKANELEKSYWVFETMRQGVSPDVY----LFSTAINAFCKGGKVEDAIQLFFD 271
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M+K G+ +V N L+ G N +E R F E G+ TY+ +I +
Sbjct: 272 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFR-FKEKMVKDGVNATLITYSVLINGLMKLE 330
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ S+L E K PN + L+ G+ K D ++ M GI N
Sbjct: 331 KFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLN 390
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
IQ CK+ + E+A+ +L+ MLSRG N + +IH E A + M
Sbjct: 391 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 450
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
P+ LC+ G++ A+++ + KG+ + T +L+ GL + EA
Sbjct: 451 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 510
Query: 377 NELIGLMKKR 386
L+ M +R
Sbjct: 511 VRLLKKMLER 520
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 2/227 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + + +A+ +L EL T+ +L N + I Y + A + ++
Sbjct: 598 TYGVMIDGYCKADKIEEGEKLFTELLTQ-NLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 656
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ + ++L+ G E+ K + E K G+ PN Y +I +C+ G
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK-EGLLPNVVCYTALIGGYCKLG 715
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
V ++L EM I PN + +++ G+ K + K+L M GI YN
Sbjct: 716 QMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYN 775
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ CK + EE + D M G+ + TY L+HG+ + L
Sbjct: 776 VLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 125/261 (47%), Gaps = 5/261 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++H F + K G R +N LL G K E + + G P++ +YN
Sbjct: 110 LEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYN 169
Query: 187 KVIKSFC---ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV-LQM 242
++K C + ++ + ++A+ + S PN + ++ GF+ E + + + L+M
Sbjct: 170 ILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEM 229
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M++ GI V Y I LCK + + A+A+ M+ G+KPN+DTY LIHG+ G
Sbjct: 230 MDR-GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGK 288
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ ++ M+ GG +P+ + +LC+ G A + + KG P +T
Sbjct: 289 WKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGI 348
Query: 363 LVTGLASISKVAEANELIGLM 383
++ G A+ ++E ++L+ LM
Sbjct: 349 MLHGYATKGALSEMHDLLNLM 369
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 1/258 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A + D A F++M G++ ++D N L+ G + ++EV R+ E G +PN
Sbjct: 250 KAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM-SAGGPKPNC 308
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++ C++G M K I+P+ T +G++L G+ + ++ +L +
Sbjct: 309 CTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNL 368
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M GI+ +++NI + K ++A + + M +G+ P+ +Y LI K G
Sbjct: 369 MVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGR 428
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A+ F M N G PD F Y LC ++E ++ + G P+ +
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNT 488
Query: 363 LVTGLASISKVAEANELI 380
++ L +V E L+
Sbjct: 489 ILCNLCKEGRVMEGQRLV 506
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P++ +Y +I + C+ G +M + + P+ F L+ G K+E V
Sbjct: 408 GLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKV 467
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M GI + +N + +LCK R E + L+D + G++P++ +Y LI G
Sbjct: 468 EELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDG 527
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G ++ A KL M + G +PDS+ + + C+ G ++A R ++ G P
Sbjct: 528 HCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPG 587
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T +++ GL + +EA EL
Sbjct: 588 VVTYNTILHGLFQTKRFSEAKEL 610
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P+ TY VI C++ ++ +M ++PN + L+ G+ K+++V
Sbjct: 233 GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEV 292
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ M G Y + LCK R EA+ D M+ +GIKP++ TY ++HG
Sbjct: 293 VRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHG 352
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ +G L L M G P+ + F +F + G + A+ + +G P
Sbjct: 353 YATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPD 412
Query: 357 FSTMKSLVTGLASISKVAEA 376
+ +L+ L + +V +A
Sbjct: 413 AVSYGALIDALCKLGRVDDA 432
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 6/290 (2%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
V S ++YG + + + F EM G+ ++ N +L E +R+
Sbjct: 450 VFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSI 509
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G+ P+ +YN +I C +G +L M ++P++ + LL G+ K +
Sbjct: 510 -ECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGR 568
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ + M GI GV YN + L + KR EAK L M++ G K ++ TY
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+++G K ++ A K+F ++ + G + + F + L +GG E A+ + A A G
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FPKSGDMWNAALPR 400
V + T + +V L + E + L M+K P S M NA + R
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNS-QMLNALVRR 737
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 133/313 (42%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + FS V L + + + +L E+ + N F + + + +
Sbjct: 447 DIVVFSSLVYGLCTVDKWEKVEELFFEM-LNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ ++ G+R V + N L+ G L+ +E ++ V G++P+S +YN ++ +C
Sbjct: 506 VDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV-GLKPDSFSYNTLLHGYC 564
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G S YS +M I P + +L G ++ ++ + ++ M G +
Sbjct: 565 KAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIY 624
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + LCK +EA + + S+G++ N+ T+ +I K G E A LFA++
Sbjct: 625 TYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G + + + L + G E + A G P+ + +LV L +
Sbjct: 685 PANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 744
Query: 374 AEANELIGLMKKR 386
+ A + + +R
Sbjct: 745 SRAGAYLSKLDER 757
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 3/265 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H+ +I Y + +ID AM F +M + GL + AL+ ++ + F +
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G+ P+ ++ ++ C V + EM I PN F +L KE
Sbjct: 439 MIN-EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + +++ +E G+ V YN I C +EA LL+GM+S G+KP+ +Y
Sbjct: 498 RVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYN 557
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+HG+ K G ++ A F M + G P + + L Q + A ++ +
Sbjct: 558 TLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 617
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G T ++ GL + V EA
Sbjct: 618 GTKWDIYTYNIILNGLCKSNCVDEA 642
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 13/273 (4%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNY-------EEVKRIFTEFPK--VYGIEP 180
A++ F+E+ + SV A N LL S E V +F + + P
Sbjct: 33 ALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAP 92
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY-EDVGKV 239
N TY+ +I FC G ++ + + R + LL G + E + +
Sbjct: 93 NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI---KPNLDTYKHLIHG 296
LQ M + G YNI ++ LC KR+EEA LL M + PN+ +Y +I+G
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F EG ++ LF M + G PD + LC+ ++ A V + + G P+
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPN 272
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
T L+ G SI K E ++ M PK
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPK 305
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 2/255 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP--KVYGIEPNSETYNKVIKS 191
+ M + G + N LL G K EE + +V+ PN +Y+ VI
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
F G Y++ EM + I P+ + ++ G K ++ V Q M G+
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPN 272
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
++ YN I + + +E +L+ M + G KPN TY L++ K G A+ F
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
SM G +P + + + G + +A G P+ + A
Sbjct: 333 SMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCG 392
Query: 372 KVAEANELIGLMKKR 386
+ +A ++ M+++
Sbjct: 393 IIDKAMDIFNKMRQQ 407
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 30/302 (9%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ AM F + GL Q+V ++ I + EE +F+ K G PNS+ N
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEK-NGTAPNSQMLNA 733
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF----YKEH------------ 231
+++ GD S + L+++ ++ A+ +L++ F Y+ H
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793
Query: 232 ------------KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +D + + M G+ V YN + L + R EAK L M+
Sbjct: 794 EANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ + N+ TY +++G K ++ A K+F S+ + G + + F + L +GG E
Sbjct: 854 NSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKE 913
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
A+ + A A G VP T + + L + E + L M+K P + NA +
Sbjct: 914 DAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALV 973
Query: 399 PR 400
R
Sbjct: 974 RR 975
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN ++ ++G S + M + N + ++L G K + ++
Sbjct: 821 GLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEA 880
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ Q + G+ + +NI I +L K R E+A L + + G+ P++ TY+ +
Sbjct: 881 FKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAEN 940
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+EG+LE LF +M G DS L Q G+ A
Sbjct: 941 LIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA 985
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 1/255 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ +++ G V N +L C + +E R+ + P +G +P+ +YN V
Sbjct: 172 AVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAV 231
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K C + V ++ EM R PN F L+ + +E V +VL M G
Sbjct: 232 LKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGC 291
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ +Y + +CK E A +LD M S G+KPN+ Y ++ G E A++
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEE 351
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L A M + C D F + F CQ G +++ + G VP T +++ G
Sbjct: 352 LLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFC 411
Query: 369 SISKVAEANELIGLM 383
+ EA L+ M
Sbjct: 412 KEGLIDEAVMLLKSM 426
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 144/314 (45%), Gaps = 15/314 (4%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANM 126
P + + F+ + L + F + Q+L ++ PD+R +++ VL G +
Sbjct: 257 PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIR------MYATVLDGVCKEGH 310
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A + + M YGL+ +V N +L G ++ +E+ + + E + T+N
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFD-NDCPLDDVTFN 369
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC++G V +L +M P+ + ++ GF KE ++ +L+ M C
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC 429
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y I ++ LC +R +A+ L+ M+ +G PN T+ +I+ K+G +E A
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQA 489
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L M GC PD + L + G+ + AL++ + KG P+ S+ +
Sbjct: 490 IELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549
Query: 367 LASISKVAEANELI 380
L SK N +I
Sbjct: 550 L---SKEGRINRVI 560
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 127/313 (40%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A + + L+EE+ R N I + + + Q
Sbjct: 224 DVVSYNAVLKGLCMAKRWGRVQDLMEEM-VRVGCPPNVVTFNTLIGYLCRNGLFERVHQV 282
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M +G + +L G + E I P YG++PN YN V+K C
Sbjct: 283 LAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS-YGLKPNVVCYNTVLKGLC 341
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +LAEM + F +L+ F + V ++L+ M + G V
Sbjct: 342 SAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVI 401
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M + G +PN +Y ++ G A+ L + M
Sbjct: 402 TYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQM 461
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ F FLC+ G E A+++ + + G P + +++ GL K
Sbjct: 462 IEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKT 521
Query: 374 AEANELIGLMKKR 386
EA EL+ +M +
Sbjct: 522 DEALELLNVMVNK 534
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 139/320 (43%), Gaps = 8/320 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L A + +LL E+ + F++ + + Q ++ ++ E
Sbjct: 331 VCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNIL-VDFFCQNGLVYRVIELLE 389
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M ++G V ++ G +E + G PN+ +Y V+K C +
Sbjct: 390 QMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC-GCRPNTISYTIVLKGLCSA 448
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
++++M + PN F ++ K+ E ++L+ M G + + Y
Sbjct: 449 ERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISY 508
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K +++EA LL+ M+++G+ PN Y + KEG + ++F ++ +
Sbjct: 509 STVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQD 568
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ G + A++ ++ G +P+ ST L+ GLAS V E
Sbjct: 569 VTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKE 628
Query: 376 ANELI------GLMKKRFPK 389
A E++ G ++K F K
Sbjct: 629 AQEMLTELCSKGALRKHFMK 648
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/244 (20%), Positives = 87/244 (35%), Gaps = 41/244 (16%)
Query: 185 YNKVIKSFCESGDSSS--------------------------------VYSILAEMRRKS 212
YN ++ +C +G +S S+L EMRR+
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRG 145
Query: 213 IRPNATDFGLLLAGFYKE---HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS- 268
P + ++L + +VLQ + G A V N+ + ++C S
Sbjct: 146 CAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSV 205
Query: 269 -EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
E + L D S G P++ +Y ++ G + L M GC P+ F
Sbjct: 206 DEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNT 265
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
+LC+ G +E +V + G P +++ G+ + A+E++ R
Sbjct: 266 LIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEIL----DRM 321
Query: 388 PKSG 391
P G
Sbjct: 322 PSYG 325
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 10/294 (3%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
+++ + L + + +L E+K PD F H I+ G++ I+ ++
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPD-----EFTYHLILDAMGKSMRIEDMLK 822
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM G + + N ++ G + SK +E ++ + G P TY ++
Sbjct: 823 IQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMS-EGFSPTPCTYGPLLDGL 881
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ G+ ++ EM PN + +LL G+ E V ++ + M + G+ +
Sbjct: 882 LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + I +LC R + + + G++P+L TY LIHG GK G LE A L+
Sbjct: 942 KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND 1001
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G P+ Y + +L + G+ A K+ +AKGW P+ T +L+ G
Sbjct: 1002 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRG 1055
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A F+EM + G + N LL G ++ + E+V +F + G+ P+ ++Y
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE-QGMNPDIKSYT 945
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI + C G + S ++ + P+ + LL+ G K + E+ + MEK
Sbjct: 946 VVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKK 1005
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA + YN I L K ++ EA + + +L++G KPN+ TY LI G+ G+ E A
Sbjct: 1006 GIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENA 1065
Query: 307 KKLFASMTNGGCEPDSYCFF 326
+ M GGC P+S +
Sbjct: 1066 FAAYGRMIVGGCRPNSSTYM 1085
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 5/301 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+++ +S +A+ FN +L + N HV I +G++ A++ +E
Sbjct: 383 SYNSLISGFLKADRFNRALELFNHMNIHGP-TPNGYTHVLFINYHGKSGESLKALKRYEL 441
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ V A NA+L G + KR+F E K GI P++ TY +IK ++
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHEL-KAMGISPDNITYTMMIKCCSKAS 500
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
++ I AEM P+ L+ YK + + K+ +++ + YN
Sbjct: 501 NADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYN 560
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ L + + +E LL+GM S PN+ TY ++ K G + A + SMT
Sbjct: 561 TLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMN 620
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC PD + Y L + G + A + C+ M K P ++T+ +++ + E
Sbjct: 621 GCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQ--MKKVLAPDYATVCTILPSFVRSGLMKE 678
Query: 376 A 376
A
Sbjct: 679 A 679
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 1/255 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
++ID A + F EM + G + +L S E++ +I E G + T
Sbjct: 780 DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHN-KGYKSTYVT 838
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I +S ++ ++ + P +G LL G K+ ED + M
Sbjct: 839 YNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML 898
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+CG +YNI + +E+ L + M+ +G+ P++ +Y +I +G L
Sbjct: 899 ECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN 958
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
F +T+ G EPD + + + L + G E AL + KG P+ T SL+
Sbjct: 959 DGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 1018
Query: 365 TGLASISKVAEANEL 379
L K AEA ++
Sbjct: 1019 LYLGKAGKAAEAGKM 1033
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 6/292 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + + + + ++ + ++ EE+ + + ++ ++ G ++ M+D A+
Sbjct: 800 DEFTYHLILDAMGKSMRIEDMLKIQEEMHNK---GYKSTYVTYNTIISGLVKSKMLDEAI 856
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++ G + LL G + N E+ + +F E + G EPN YN ++
Sbjct: 857 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLEC-GCEPNCAIYNILLNG 915
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+ +GD+ V + M + + P+ + +++ + + D + + G+
Sbjct: 916 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 975
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN+ I L K R EEA +L + M +GI PNL TY LI GK G A K++
Sbjct: 976 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 1035
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ G +P+ + + G E A + G P+ ST L
Sbjct: 1036 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++ + G+ + NAL+ G + + + +F+E ++ G +P+ TY+ ++
Sbjct: 750 AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL-GCDPDEFTYHLIL 808
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ +S + I EM K + + +++G K ++ + + G +
Sbjct: 809 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS 868
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y + L K E+A+AL D ML G +PN Y L++G+ G+ E +L
Sbjct: 869 PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 928
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F SM G PD + + LC G L + G P T L+ GL
Sbjct: 929 FESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 988
Query: 370 ISKVAEANELIGLMKKR 386
++ EA L M+K+
Sbjct: 989 SGRLEEALSLYNDMEKK 1005
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P TY+ ++ +F + D+ +V +L EM + +RPN + + + + + E+
Sbjct: 201 GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ ME+ G V + IQ LC R +AK + M + KP+ TY L+
Sbjct: 261 YRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK 320
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G G+ +++ ++ G + + LCQ G + AL V KG +P
Sbjct: 321 CGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQ 380
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ SL++G + A EL M P
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGP 412
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM+ G+R +V + + + EE RI + + G +P+ T +I+ C++
Sbjct: 231 EMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEE-EGCKPDVVTNTVLIQILCDA 289
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + + +M+ +P+ + LL V ++ ++ G V Y
Sbjct: 290 GRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSY 349
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ +LC++ R +EA + D M +GI P +Y LI GF K A +LF M
Sbjct: 350 TAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNI 409
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P+ Y +F + + GE ALK +KG VP +++ GLA ++
Sbjct: 410 HGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGM 469
Query: 376 ANELIGLMK 384
A + +K
Sbjct: 470 AKRVFHELK 478
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI N+ TYN +I +SG + M + P + +L+ F K E V
Sbjct: 166 GIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETV 225
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L ME G+ V Y I I+ L + R EEA +L M G KP++ T LI
Sbjct: 226 VGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQI 285
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G L AK +F M +PD + G+ + ++ A A G+ +
Sbjct: 286 LCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDN 345
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + V L + +V EA ++ MK++
Sbjct: 346 VVSYTAAVDALCQVGRVDEALDVFDEMKQK 375
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 88/222 (39%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F + + +E+ N +++ G V + M+R+ I+ N F
Sbjct: 82 EEALELFLSVARQPRVVHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCT 141
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+ E L +M++ GI YN I L K EA + M + G
Sbjct: 142 VFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADG 201
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P + TY L+ FGK + E L M G P+ Y + + L Q G E A
Sbjct: 202 VVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAY 261
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
++ R +G P T L+ L ++A+A ++ MK
Sbjct: 262 RILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMK 303
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 103/259 (39%), Gaps = 35/259 (13%)
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL------- 205
L+ IL ++ E F E G+ + + +I+ FC+ ++ + + ++
Sbjct: 702 LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLG 761
Query: 206 ----------------------------AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+EM+R P+ + L+L K + ED+
Sbjct: 762 VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 821
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+ + M G S YN I L K K +EA L ++S G P TY L+ G
Sbjct: 822 KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 881
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K+GN+E A+ LF M GCEP+ + + G+ E ++ + + +G P
Sbjct: 882 LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 941
Query: 358 STMKSLVTGLASISKVAEA 376
+ ++ L + ++ +
Sbjct: 942 KSYTVVIDTLCADGRLNDG 960
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 108/254 (42%), Gaps = 3/254 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+++A+ M G + + N ++ G + +E +F + KV + P+ T
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKV--LAPDYATVC 664
Query: 187 KVIKSFCESG-DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ SF SG +++++ + + + + + L+ G K E + + +
Sbjct: 665 TILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAENIAS 724
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ + I+ CK K + A L+ + G+ +Y LI G E ++
Sbjct: 725 SGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDI 784
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++LF+ M GC+PD + + + + + E LK+ KG+ + T ++++
Sbjct: 785 AEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIIS 844
Query: 366 GLASISKVAEANEL 379
GL + EA L
Sbjct: 845 GLVKSKMLDEAINL 858
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 12/288 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHA 130
+DR++++ +S + L+E+ R N + +SI++ G NM ++ A
Sbjct: 527 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN---YTYSILICGLFNMNKVEEA 583
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+Q +++ + G+ V + ++ GC ++ EE + F E ++PN+ YN +I+
Sbjct: 584 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS-KNVQPNTVVYNHLIR 642
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++C SG S + +M+ K I PN+ + L+ G + E+ + + M G+
Sbjct: 643 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 702
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I KL + + + LL M S+ + PN TY +I G+ ++GN+ A +L
Sbjct: 703 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 762
Query: 311 ASMTNGGCEPDSYCFFMFTY-FLCQGGEYETALKVCR----ASMAKGW 353
M G PDS + F Y +L QGG E A K A++ +GW
Sbjct: 763 NEMREKGIVPDSITYKEFIYGYLKQGGVLE-AFKGSDEENYAAIIEGW 809
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 36/235 (15%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NALL G + +E RI E G + +YN +I C + L EM
Sbjct: 498 NALLHGLCEAGKLDEAFRIQKEILG-RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 556
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
++ ++P+ + +L+ G + +K E+ + ++ G+ V Y++ I CK +R+E
Sbjct: 557 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 616
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
E + D M+S+ ++PN Y HLI +
Sbjct: 617 EGQEFFDEMMSKNVQPNTVVYNHLIRAY-------------------------------- 644
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
C+ G AL++ KG P+ +T SL+ G++ IS+V EA L M+
Sbjct: 645 ---CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 696
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 5/232 (2%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A+NA G EE ++F++ + G+ PN T+N VI G + +
Sbjct: 255 AINAFCKG----GKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 309
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M + + P + +L+ G + + D VL+ M K G V VYN I S +
Sbjct: 310 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 369
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+A + D M+S+G+ TY LI G+ K G + A++L M + G + F
Sbjct: 370 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 429
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
LC +++AL+ + + P + +L++GL K ++A EL
Sbjct: 430 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 481
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 113/264 (42%), Gaps = 4/264 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F + G+ S N LL + + +++ F K G+ P+ + I
Sbjct: 199 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK--GVSPDVYLFTTAI 256
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC+ G + ++M + PN F ++ G +Y++ + M + G+
Sbjct: 257 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 316
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+I ++ L + KR +A +L M +G PN+ Y +LI F + G+L A ++
Sbjct: 317 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 376
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + G S + C+ G+ + A ++ + ++ G+ + + S++ L S
Sbjct: 377 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 436
Query: 370 ISKVAEANELIG--LMKKRFPKSG 391
A +G L++ P G
Sbjct: 437 HLMFDSALRFVGEMLLRNMSPGGG 460
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G D A E+M + G+ ++ + L+ G +K + + E K G PN
Sbjct: 295 GMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK-KGFPPN 353
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
YN +I SF E+G + I M K + ++ + L+ G+ K + ++ ++L+
Sbjct: 354 VIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK 413
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G + I LC + A + ML R + P LI G K G
Sbjct: 414 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 473
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
A +L+ N G D+ + LC+ G+ + A ++ + + +G V +
Sbjct: 474 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 533
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
+L++G K+ EA + M KR
Sbjct: 534 TLISGCCGKKKLDEAFMFLDEMVKR 558
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 3/263 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI++ G +A I A +EM K G +V N L+ I + + + I +
Sbjct: 322 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLM 380
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G+ S TYN +IK +C++G + + +L EM N F ++ +
Sbjct: 381 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 440
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ + + M ++ G + I LCK + +A L L++G + T L
Sbjct: 441 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 500
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+HG + G L+ A ++ + GC D + C + + A + +G
Sbjct: 501 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 560
Query: 354 VPHFSTMKSLVTGLASISKVAEA 376
P T L+ GL +++KV EA
Sbjct: 561 KPDNYTYSILICGLFNMNKVEEA 583
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 127/298 (42%), Gaps = 48/298 (16%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE---VKRIFTE---FPKVYGIEP 180
I+ A F E+ K GLR +V + N L+ G S N ++ +KR E FP V+
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVF---- 296
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
TY+ +I C+ G + EM + + PN F L+ G + + ++
Sbjct: 297 ---TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIY 353
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M + G+ V YN I LCK+ EAK L+ M RG+KP+ TY LI G KE
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413
Query: 301 GNLEGAKKL---------------FASMTNGGC--------------------EPDSYCF 325
G+LE A ++ F ++ +G C +PD +
Sbjct: 414 GDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATY 473
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
M + C+ G+ +T K+ + G VP T L+ GL ++ AN L+ M
Sbjct: 474 TMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 137/305 (44%), Gaps = 10/305 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSI-VLYG---QANMIDHAM 131
+ FS+ ++ + + +F+ Q ++ + N + HS L+ + N+ A
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVR-----KHNLQIPFHSCGYLFDRLMKLNLTSPAW 210
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+EE+ G V N L+ E + +F E K G+ P ++N +I
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGK-RGLRPTVVSFNTLING 269
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C+SG+ + + M + P+ + +L+ G KE + +D K+ M G+
Sbjct: 270 YCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ I C R++ + ML +G+KP++ TY LI+G K G+L AKKL
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
MT G +PD + + M C+ G+ E+AL++ + + +G +L++G
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREG 449
Query: 372 KVAEA 376
+V EA
Sbjct: 450 QVIEA 454
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 9/301 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHAM 131
D +S+ ++ L + + ++L E+ R + + F ++ + G+A++ M
Sbjct: 294 DVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADL---GM 350
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +++M + G++ V N L+ G + E K++ E + G++P+ TY +I
Sbjct: 351 EIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQ-RGLKPDKFTYTMLIDG 409
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ GD S I EM ++ I + F L++GF +E + + + L+ M + GI
Sbjct: 410 CCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
Y + I CK + LL M G P + TY L++G K+G ++ A L
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLD 529
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+M N G PD + + C+ G E K+ KG V + + SL+ L
Sbjct: 530 AMLNLGVVPDDITYNILLEGHCKHGNREDFDKL---QSEKGLVQDYGSYTSLIGDLRKTC 586
Query: 372 K 372
K
Sbjct: 587 K 587
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 168/373 (45%), Gaps = 25/373 (6%)
Query: 38 IKEKKRATIARLKSESNPFRILDICCGASLAPESPLDR----MAFSIAVSKLSQANHFNA 93
+K K+ T+ L + P I C S+ + +AFS+ + L + H +A
Sbjct: 69 VKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDA 128
Query: 94 IS--QLLEELKTRPDLRQNERFHVHSI--------VLYG-------QANMIDHAMQTFEE 136
I+ L++ L R ++++ FH + V YG +A + +
Sbjct: 129 ITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRK 188
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
++ + ++ V N ++ +K + +++E V GI P+ TY +I FC G
Sbjct: 189 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM-IVKGISPDVVTYTTLIHGFCIMG 247
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---GIASGVN 253
+S+L EM+ K+I P+ F +L+ KE K + V + + + E+ + +
Sbjct: 248 KMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIV 307
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I LCK E A ALL M GI+P++ +Y L+ G K G LE AK+ F +
Sbjct: 308 TYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHL 367
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC + + + + LC+ G + A+ + KG +P+ T ++++ L+ +
Sbjct: 368 LVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDEN 427
Query: 374 AEANELIGLMKKR 386
+A +++ M R
Sbjct: 428 DKAEKILREMIAR 440
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 13/289 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMIDH 129
LD++++ ++ L +A A+++LL +L+ +PD+ ++S+ + ++
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTI-INSLC---KNKLLGD 216
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + EM G+ V L+ G CI+ K +E + E K+ I P+ T++ +
Sbjct: 217 ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGK-MKEAFSLLNEM-KLKNINPDVYTFSVL 274
Query: 189 IKSFCESGDSSSV---YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
I + + G V S+ EM+ K++ P+ + L+ G K H E +L+ M++
Sbjct: 275 IDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKE 334
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
GI V Y I + LCK R E AK +L +G N+ Y +I+G K G
Sbjct: 335 HGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGE 394
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
A L + M GC P++ F L + E + A K+ R +A+G +
Sbjct: 395 AMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLL 443
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 99/266 (37%), Gaps = 40/266 (15%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q + HA+ +F M N +L + +K Y V +F +F + GI P
Sbjct: 33 HSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQF-EPNGITP 91
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ T + +I FC + +S+ A + ++ P+A L+ G
Sbjct: 92 DLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKG-------------- 137
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL--DGMLSRGIKPNLDTYKHLIHGFG 298
LC R E K L D ++++G + + +Y LI+G
Sbjct: 138 ---------------------LCF--RGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLC 174
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G + +L + +PD + LC+ A V + KG P
Sbjct: 175 KAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 234
Query: 359 TMKSLVTGLASISKVAEANELIGLMK 384
T +L+ G + K+ EA L+ MK
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMK 260
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++D A F++M G++ N L+ G + + ++EV ++ E +G+EP+
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM-STHGLEPDC 266
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++ C++G M RK I+P+ + +LL G+ + ++ L +
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G++ ++NI + K EEA + + M +G+ P++ ++ LI K G
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A F M N G P+ + F Y LC G++E A ++ + +G +
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446
Query: 363 LVTGLASISKVAEANELIGLMKK 385
L+ L + +V EA LI LM +
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIR 469
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 36/278 (12%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M ++G V A N ++ G E+ +F E GI PN TY VI C++
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMD-QGIPPNVVTYTTVIDGLCKAQ 210
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ +M + ++P+ + L+ G+ K+++V ++L+ M G+ Y
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL------------- 303
+ + LCK R EA+ D M +GIKP++ Y L+HG+ +G L
Sbjct: 271 LLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN 330
Query: 304 ----------------------EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
E A +F M G PD F LC+ G + A
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDA 390
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + +G P+ SLV GL ++ K +A EL
Sbjct: 391 VLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEEL 428
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 47/301 (15%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLL-----GCILSKNYEEVKRIFTEFPKVYG--IE 179
+D A++ F+E+ SV A N LL GC S E V +FT + +
Sbjct: 30 LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGC--SSASERVVSLFTRMARECSSKVA 87
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN-------------------ATDF 220
PN+ TY+ +I FC G ++ + + R N ATD
Sbjct: 88 PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147
Query: 221 GLL-----------------LAGFYKEHKYEDVGKV-LQMMEKCGIASGVNVYNIRIQSL 262
LL + GF++E + E + L+MM++ GI V Y I L
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQ-GIPPNVVTYTTVIDGL 206
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CK + + AK + M+ RG+KP+ TY LIHG+ G + ++ M+ G EPD
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + +LC+ G A + KG P + L+ G A+ ++E + + L
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326
Query: 383 M 383
M
Sbjct: 327 M 327
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F +M G+ ++ ++L+ G +E+ + +F E GI ++ +N
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLD-QGICVDAVFFN 445
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + C G ++ M R +RPN + L+AG + ++ K+L +M
Sbjct: 446 TLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSN 505
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ Y I ++ CK +R ++A +L ML +G+ P + TY ++HG + G A
Sbjct: 506 GLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEA 565
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+L+ +M N + D Y + + LC+ + A K+ R
Sbjct: 566 NELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFR 605
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 1/217 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE IF + + G+ P+ ++ +I + C+ G +M + + PN F
Sbjct: 353 EEAMHIFNKM-RQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSS 411
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K+E ++ + GI +N + +LC R EA+ L+D M+ G
Sbjct: 412 LVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVG 471
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
++PN+ +Y L+ G G ++ A KL M + G +P+ + + + C+ + A
Sbjct: 472 VRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAY 531
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ R + KG P +T +++ GL + +EANEL
Sbjct: 532 SLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANEL 568
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 124/290 (42%), Gaps = 6/290 (2%)
Query: 115 VHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
V S ++YG + + A + F E+ G+ N L+ E +R+
Sbjct: 408 VFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLM 467
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+V G+ PN +YN ++ C +G +L M ++PN + +LL G+ K +
Sbjct: 468 IRV-GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+D + + M G+ V YN + L + R EA L M++ K ++ TY
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+++G K ++ A K+F + + + DS F + L +GG E A+ + A G
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYG 646
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FPKSGDMWNAALPR 400
VP T + + L + E + L M+K P S M NA + R
Sbjct: 647 LVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNS-HMLNALVRR 695
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 100/260 (38%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++H F + K G R +V ++ LL G +K +E I +G P+ YN
Sbjct: 106 LEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYN 165
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI F G Y++ EM + I PN + ++ G K + V Q M
Sbjct: 166 TVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDR 225
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ YN I + +E +L+ M + G++P+ TY L+ K G A
Sbjct: 226 GVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREA 285
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ F SM G +PD + + + G + G P+ +
Sbjct: 286 RLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCA 345
Query: 367 LASISKVAEANELIGLMKKR 386
A + + EA + M+++
Sbjct: 346 YAKKAMIEEAMHIFNKMRQQ 365
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 5/250 (2%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + + M + G+R +V + N L+ G L+ +E ++ + G++PN TY +
Sbjct: 459 EAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL-DVMVSNGLKPNEFTYTIL 517
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
++ +C++ YS+ EM K + P + +L G ++ ++ + ++ M
Sbjct: 518 LRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRT 577
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD--TYKHLIHGFGKEGNLEGA 306
+ YNI + LCK +EA + + S+ P LD T+ +I K G E A
Sbjct: 578 KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK--DPQLDSVTFNIMIGALLKGGRKEDA 635
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LFA+++ G PD + + L + G + A G P+ + +LV
Sbjct: 636 MDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRR 695
Query: 367 LASISKVAEA 376
L ++ A
Sbjct: 696 LLHRGDISRA 705
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 10/230 (4%)
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNS-ETYNKVIKSFCESGDSSS---VYSILAEMRRKS-- 212
S +E ++F E ++ P S +N+++ +G SS+ V S+ M R+
Sbjct: 27 SLGLDEALKLFDEL--LHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSS 84
Query: 213 -IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ PNA + +L+ F + + E ++ K G V V + ++ LC KR +EA
Sbjct: 85 KVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEA 144
Query: 272 KALLDGMLSR-GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
+L +S G P++ Y +I+GF +EG +E A LF M + G P+ +
Sbjct: 145 TDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVID 204
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
LC+ + A V + + +G P T L+ G S K E +++
Sbjct: 205 GLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQML 254
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 10/319 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVL-YGQANMIDH 129
D + ++ + L + + + +L E+ K PD ++IV Q ++D
Sbjct: 266 DAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD-----EVTFNTIVTSLCQQGLVDR 320
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ + M ++G + +++L G ++ + + K YG +P++ Y V+
Sbjct: 321 AIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRL-KSYGCKPDTIAYTTVL 379
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K C ++AEM P+ F ++A ++ + KV++ M + G
Sbjct: 380 KGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCN 439
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I LC + ++A LL + S G KP++ T+ L+ G E A++L
Sbjct: 440 PDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL 499
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+M + C PD+ F LCQ G A++ + G +P+ ST +V L
Sbjct: 500 MVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLK 559
Query: 370 ISKVAEANELIGLMKKRFP 388
K EA +L+ M P
Sbjct: 560 AGKTQEALKLLSGMTNGTP 578
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 108/252 (42%), Gaps = 1/252 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM +EM G + N L+ + +E I ++ P +G +P++ TY V
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPS-HGCKPDAVTYTPV 273
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+KS C S V + AEM P+ F ++ ++ + KV+ M + G
Sbjct: 274 LKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGC 333
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y+ + LC + R ++A LL + S G KP+ Y ++ G E A++
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L A M C PD F LCQ G + A+KV G P T S++ GL
Sbjct: 394 LMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLC 453
Query: 369 SISKVAEANELI 380
+ + +A EL+
Sbjct: 454 NERCIDDAMELL 465
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 4/244 (1%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G +V N ++ G + E+ +R+ + P P++ T+N +I++ C G
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGMP----FPPDTFTFNPLIRALCVRGRVPD 180
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++ +M + P+ + +LL K Y +L M G + YN+ I
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLIN 240
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
++C +EA +L + S G KP+ TY ++ + ++LFA M + C P
Sbjct: 241 AMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP 300
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D F LCQ G + A+KV G +P T S++ GL + +V +A EL+
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360
Query: 381 GLMK 384
+K
Sbjct: 361 SRLK 364
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 136/316 (43%), Gaps = 14/316 (4%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MI 127
+ P D + F+ ++ L Q + +++E++ N ++ ++ G N I
Sbjct: 402 DCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN---GCNPDIVTYNSIIDGLCNERCI 458
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D AM+ + YG + + N LL G +E+ +++ P++ T+N
Sbjct: 459 DDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMH-SDCPPDATTFNT 517
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VI S C+ G L M PN + + +++ K K ++ K+L G
Sbjct: 518 VITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS-----G 572
Query: 248 IASGVN---VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ +G YN I ++ K + EEA LL M+S G+ P+ TY+ L +G +E +
Sbjct: 573 MTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTD 632
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A ++ + + G PD+ + CQ + A+ ++ G +P ST L+
Sbjct: 633 RAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILL 692
Query: 365 TGLASISKVAEANELI 380
LA + EA +L+
Sbjct: 693 EALAYECLLDEAKQLL 708
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TYN VI + ++G +L M + P+ + L G +E + ++
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRM 637
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L ++ G++ YN + C+ R++ A M+S G P+ TY L+
Sbjct: 638 LCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAY 697
Query: 300 EGNLEGAKKLFASMTNGG 317
E L+ AK+L ++ + G
Sbjct: 698 ECLLDEAKQLLVNLCSLG 715
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
NI I+ LC R +A+ + + G + TY +++G+ + G +E A++L + M
Sbjct: 102 NILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMPF 158
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
PD++ F LC G AL V + +G P T L+ S +
Sbjct: 159 ---PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215
Query: 376 ANELIGLMKKR 386
A L+ M+ +
Sbjct: 216 AMVLLDEMRAK 226
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 156/345 (45%), Gaps = 41/345 (11%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
E P D + + V L +A+ + + +EE++ + +R NE + + + + Q +D
Sbjct: 188 ELPTDVITCTTIVGGLCKASRLDDALKFMEEMR-QMGVRPNEVTYSNLVHGFRQHGELDR 246
Query: 130 AMQTFEEMDKYGLRQSVDA------LNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
++ FEE +K S++A L+AL L + + V+ + + G+ P+
Sbjct: 247 VIRFFEE-EKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEEL-----RQSGVVPDVV 300
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY+ +I +F +G + +L +MRR ++P+ + L+ KE K++D ++L++M
Sbjct: 301 TYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELM 360
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E G V YN + LCK + +E + + ML P++ TY +++G K G L
Sbjct: 361 EAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGML 420
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL-------------KVCRASMA 350
+ A KLF + + PD+ + M LC+ G+ E A +CRA
Sbjct: 421 DSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRA--- 477
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK---RFPKSGD 392
+ LV L + A ++ + + R KSGD
Sbjct: 478 ---------LAGLVAALCDAERTDSARRIVEVASERGHRMTKSGD 513
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 135/316 (42%), Gaps = 8/316 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+D AF++ +KL + + F+ + +L L +R + + + L G A M + A++
Sbjct: 17 VDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCG-AGMANQALE 75
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
E+ ++ N ++ G + + ++ + + I PN TY ++
Sbjct: 76 LVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVE-ESIVPNVFTYTILLNGL 133
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C S + + EM+R +PN +G L+ + + ++ +V+ + + V
Sbjct: 134 CRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDV 193
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA- 311
+ LCK R ++A ++ M G++PN TY +L+HGF + G L+ + F
Sbjct: 194 ITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEE 253
Query: 312 --SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ G E +Y ++ LC+ G + A K G VP T L+ A
Sbjct: 254 EKARKGGSLEAAAYPGYLDA--LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFAR 311
Query: 370 ISKVAEANELIGLMKK 385
+ + EL+ M++
Sbjct: 312 AGQFDASLELLEDMRR 327
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 37/343 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQ--NERFHVHSIVLYGQANMIDHAMQTF 134
+F I V L ++ F + L E + + NE F + Y +A++ D A+++F
Sbjct: 109 SFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWI-IFTAYSRADLPDGAIRSF 167
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKN-------YEEVKRIFTEFPKVYGIEPNSE---- 183
MD++G++ S+ ++ LL K+ +++VK F K Y I N
Sbjct: 168 VRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIG 227
Query: 184 ----------------------TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
YN ++++ C+ G L +M K + P+A +
Sbjct: 228 DSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYS 287
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+ + + + VL M +C + V YN I+ LCK+K+ EEA LLD M+S
Sbjct: 288 IFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISS 347
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G+KP+ +Y + + A KL + M C PD + + M L + G ++ A
Sbjct: 348 GLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKA 407
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASIS-KVAEANELIGLM 383
+V K + P ST ++ GL K+ EA + +M
Sbjct: 408 TEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMM 450
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 9/217 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDH 129
+D +A++ + L + H + L ++ K PD F I Y AN +
Sbjct: 246 VDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIF----IRSYCDANNVHS 301
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A ++M + L +V N ++ K EE ++ E G++P++ +YN +
Sbjct: 302 AFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISS-GLKPDTWSYNAIQ 360
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ + + +++ M + P+ + ++L + +++ +V + M
Sbjct: 361 AYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFY 420
Query: 250 SGVNVYNIRIQSLCKLK-RSEEAKALLDGMLSRGIKP 285
V+ Y++ I LCK K + EEA M+ GI P
Sbjct: 421 PSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPP 457
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ N I+ A+ F+++ G R +V L+ +++ IF + GI P
Sbjct: 162 FCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGD-NGIRP 220
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN ++ CE G S +L +M ++ I+PN F L+ F K K + ++
Sbjct: 221 NVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELY 280
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++M + + V Y I LC R +EA+ + M S G PN TY LIHGF K
Sbjct: 281 KVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS 340
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+E K+F M+ G ++ + + C G + A +V ++ P T
Sbjct: 341 KRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTY 400
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
L+ GL V +A + M+KR
Sbjct: 401 NVLLDGLCYNGYVEKALMIFKYMRKR 426
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D + FE+M G+ + N +++ C+ + F G EP+ T+
Sbjct: 99 DVVISLFEQMQILGISPVLYTCN-IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTS 157
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC ++ ++ RPN + L+ K ++ M G
Sbjct: 158 LLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNG 217
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V YN + LC++ R +A LL M+ RGI+PN+ T+ LI F K G + AK
Sbjct: 218 IRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAK 277
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L+ M PD + + LC G + A ++ + G+ P+ T +L+ G
Sbjct: 278 ELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGF 337
Query: 368 ASISKVAEANELIGLMKKR 386
+V + ++ M ++
Sbjct: 338 CKSKRVEDGTKIFYEMSQK 356
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 127/294 (43%), Gaps = 36/294 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++HA++ F +M G+R +V N+L+ G + + + + K GI+PN T+
Sbjct: 203 LNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMK-RGIQPNVITFT 261
Query: 187 KVIKSFCESG---DSSSVYSILAEM--------------------RRKSIR--------- 214
+I +F + G ++ +Y ++ +M R R
Sbjct: 262 ALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESN 321
Query: 215 ---PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
PN + L+ GF K + ED K+ M + G+ + Y + IQ C + R + A
Sbjct: 322 GYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVA 381
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ + + M SR P++ TY L+ G G +E A +F M + + + +
Sbjct: 382 QEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQG 441
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+C+ G+ E A + + +KG P+ T ++++G + EA+ L MK+
Sbjct: 442 MCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 8/242 (3%)
Query: 80 IAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK 139
+ V K+ +A + +++ ++ PD+ ++ + YG+ +D A Q F M+
Sbjct: 268 VKVGKIMEAKE---LYKVMIQMSVYPDVFTYTAL-INGLCTYGR---LDEARQMFYLMES 320
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G + L+ G SK E+ +IF E + G+ N+ TY +I+ +C G
Sbjct: 321 NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQ-KGLVANTITYTVLIQGYCLVGRPD 379
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ +M + P+ + +LL G E + + M K + + Y I I
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIII 439
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
Q +CK+ + E+A L + S+G+KPN+ TY +I GF + G + A LF M G
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFL 499
Query: 320 PD 321
P+
Sbjct: 500 PN 501
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 1/225 (0%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
K ++ V +F + ++ GI P T N V+ C S L +M + P+
Sbjct: 96 KRFDVVISLFEQM-QILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVT 154
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F LL GF ++ ED + + G V Y I LCK + A + + M
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMG 214
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
GI+PN+ TY L+ G + G A L M G +P+ F + G+
Sbjct: 215 DNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIM 274
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
A ++ + + P T +L+ GL + ++ EA ++ LM+
Sbjct: 275 EAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y K++++ + + + M P+ DF LL+ K +++ V + + M+
Sbjct: 50 YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI+ + NI + +C+ + A L M+ G +P+L T+ L+HGF +E
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A LF + G P+ + + LC+ A+++ G P+ T SLV
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229
Query: 365 TGLASISKVAEANELIGLMKKR 386
+GL I + ++A L+ M KR
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKR 251
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 114/275 (41%), Gaps = 2/275 (0%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
VS L + ++ + LL ++ R ++ N I + + I A + ++ M +
Sbjct: 229 VSGLCEIGRWSDAAWLLRDMMKR-GIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS 287
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+ V AL+ G +E +++F + G PN TY +I FC+S
Sbjct: 288 VYPDVFTYTALINGLCTYGRLDEARQMF-YLMESNGYYPNEVTYTTLIHGFCKSKRVEDG 346
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
I EM +K + N + +L+ G+ + + +V M + YN+ +
Sbjct: 347 TKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDG 406
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LC E+A + M R + N+ TY +I G K G +E A LF S+ + G +P+
Sbjct: 407 LCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPN 466
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ C+ G A + + G++P+
Sbjct: 467 VITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 4/255 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH++ + G+ A + EEM GL V N L+ G N ++ IF +
Sbjct: 259 VHALFMDGRGT---EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 315
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ TY +I + + G + E R+ IRP+ + L+ +
Sbjct: 316 -RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 374
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+++ MEK IA YN ++ LC L R +EA+ L+D M RGI+P+L TY LI
Sbjct: 375 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 434
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G+ +G+++ A ++ M N G P + LC+ G+ + A + + + G
Sbjct: 435 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 494
Query: 355 PHFSTMKSLVTGLAS 369
P ST SL+ GL +
Sbjct: 495 PDDSTYISLIEGLTT 509
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 138/325 (42%), Gaps = 7/325 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ A ++ E++ R + N+ + I + + +D A++ F+
Sbjct: 146 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 205
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM G + + L+G + + ++ + G+ TYN ++ +
Sbjct: 206 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 265
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + Y ++ EM K + P+ + +L+ G KE + ++ + M + G+ + V Y
Sbjct: 266 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 325
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I +L K + +E L D + RGI+P+L Y LI+ GN++ A ++ M
Sbjct: 326 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 385
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
PD + LC G + A K+ +G P T +L++G + V +
Sbjct: 386 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 445
Query: 376 A----NELIGLMKKRFPKSGDMWNA 396
A NE +M K F + +NA
Sbjct: 446 ALRIRNE---MMNKGFNPTLLTYNA 467
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 6/245 (2%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
+ +++ G LAP D ++I ++ + + ++ E + +R +R +
Sbjct: 272 YELVEEMGGKGLAP----DVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVVTYT 326
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I + + + F+E + G+R + NAL+ S N + I E K
Sbjct: 327 ALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
I P+ TYN +++ C G ++ EM + I+P+ + L++G+ + +D
Sbjct: 387 R-IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 445
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ M G + YN IQ LCK + ++A+ ++ M+ GI P+ TY LI
Sbjct: 446 ALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 505
Query: 296 GFGKE 300
G E
Sbjct: 506 GLTTE 510
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 9/323 (2%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM 126
+A P +A++ V+ L + + ++E++ R R R +S ++ G M
Sbjct: 203 IARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRR---RLRPRVDTYSFIVTGYIGM 259
Query: 127 --IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
++ A EEM + + EE +++F + G +P+ T
Sbjct: 260 GKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVE-KGCKPDMHT 318
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +I +FC+ G ++ +L M + +++PN + +++ GF K + E+ ++ Q +
Sbjct: 319 YGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRIL 378
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG--IKPNLDTYKHLIHGFGKEGN 302
K GI YN I +LCKLK+ +EA LL M R ++P++ TY +IHG GK G
Sbjct: 379 KDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGM 438
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
E A L A M + G PD + + L G+ A+++ + G P T +
Sbjct: 439 EERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGT 498
Query: 363 LVTGLASISKVAEANELIGLMKK 385
LV L S V A +L+ M +
Sbjct: 499 LVQILCR-SDVDAAWDLLQEMMR 520
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 156/324 (48%), Gaps = 13/324 (4%)
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG-- 122
A E+P D + ++ V L +A +++A + E++ K P L +++++ G
Sbjct: 100 AIEAP-DSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLL------TYTVLVDGLC 152
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ ++ A FEEM + G + + A ++L+ G + +E +++ + G P +
Sbjct: 153 KAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKL-VDLMIARGPPPTA 211
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y ++ C+ G + EMRR+ +RP + ++ G+ K E+ V++
Sbjct: 212 VAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEE 271
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M A Y + I++L + R EEA+ + + M+ +G KP++ TY +I F KEG+
Sbjct: 272 MADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGS 331
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A + M +P+ Y + M + E AL++ + + G +P T +
Sbjct: 332 MAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNT 391
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
++ L + K+ EA EL+ M++R
Sbjct: 392 VINALCKLKKMDEALELLREMQRR 415
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 9/316 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+F+I + + + F ++ LL E+K R + N H + +D A+ F
Sbjct: 31 SFNILLRGFAARDDFEVVNALLREMKAR-GITSNGATHGVILSALCARRDLDKAVSYFNS 89
Query: 137 MDKYGLR--QSVDALN-----ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
+ R ++++A + A++ G + NY+ + + EP TY ++
Sbjct: 90 RTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMV-ASKCEPTLLTYTVLV 148
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C++ + EM RK +P+ + L+ G K + ++ K++ +M G
Sbjct: 149 DGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPP 208
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y + LCK R +EA + M R ++P +DTY ++ G+ G +E A +
Sbjct: 209 PTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAV 268
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + C PD+ + MF L G E A KV + KG P T ++
Sbjct: 269 MEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCK 328
Query: 370 ISKVAEANELIGLMKK 385
+A A ++ LM K
Sbjct: 329 EGSMAAATHVLRLMDK 344
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK-------- 266
PN + F +LL GF +E V +L+ M+ GI S + + + +LC +
Sbjct: 27 PNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSY 86
Query: 267 ---RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
R+EEA L + + + P+ TY ++ G K GN + + + M CEP
Sbjct: 87 FNSRTEEACRLFEAIEA----PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLL 142
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + LC+ + E A V + KG P SL+ GL+ +V EA +L+ LM
Sbjct: 143 TYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLM 202
Query: 384 KKRFP 388
R P
Sbjct: 203 IARGP 207
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 125/266 (46%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G+ M++ + + +M + G+ ++ N L+ G + + + +R+F E + I+P
Sbjct: 179 FGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF-EVMESGRIKP 237
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +IK +C++G + L +M + + + ++ Y + + +
Sbjct: 238 DIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALY 297
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M++ GI + +++ I LCK + E + + M+ +G KPN+ Y LI G+ K
Sbjct: 298 QEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 357
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G++E A +L M + G +PD + + LC+ G E AL G +
Sbjct: 358 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 417
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL +V EA L M ++
Sbjct: 418 SSLIDGLGKAGRVDEAERLFEEMSEK 443
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 133/323 (41%), Gaps = 41/323 (12%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+ +++E + +PD+ + I Y +A AM+ +M+ G ++
Sbjct: 226 VFEVMESGRIKPDIVT----YNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMI 281
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
C ++ ++ E + GI+ ++ VI C+ G + Y++ M RK
Sbjct: 282 QACYADSDFGSCVALYQEMDE-KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 340
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+PN + +L+ G+ K ED ++L M G V Y++ + LCK R EEA
Sbjct: 341 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 400
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-------- 325
G+ N Y LI G GK G ++ A++LF M+ GC DSYC+
Sbjct: 401 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 460
Query: 326 -----------------------FMFTYFLCQGGEY-----ETALKVCRASMAKGWVPHF 357
++TY + G + E ALK+ + KG P
Sbjct: 461 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 520
Query: 358 STMKSLVTGLASISKVAEANELI 380
+ ++L TGL KVA A +++
Sbjct: 521 ACFRALSTGLCLSGKVARACKIL 543
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 4/277 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
AFS+ + L + N + E + R + N + I Y ++ ++ A++
Sbjct: 311 AFSLVIGGLCKEGKLNEGYTVFENM-IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 369
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G + V + ++ G + EE F + G+ NS Y+ +I ++G
Sbjct: 370 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF-HTCRFDGLAINSMFYSSLIDGLGKAG 428
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNVY 255
+ EM K ++ + L+ F K K ++ + + ME+ G V Y
Sbjct: 429 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 488
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + + K R+EEA L D M+ +GI P ++ L G G + A K+ +
Sbjct: 489 TILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAP 548
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
G D+ C M LC+ G + A K+ +G
Sbjct: 549 MGVILDAACEDMINT-LCKAGRIKEACKLADGITERG 584
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 6/248 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT-RPD-LRQNERFHVHSIVLYGQANMIDHAM 131
D + +S+ V+ L + + + L+ T R D L N F+ I G+A +D A
Sbjct: 378 DVVTYSVVVNGLCKNGR---VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 434
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ FEEM + G + NAL+ + +E +F + G + TY ++
Sbjct: 435 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 494
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+ + + M K I P A F L G K K+L + G+
Sbjct: 495 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 554
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
++ I +LCK R +EA L DG+ RG + +I+ K G + A KL
Sbjct: 555 AACEDM-INTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMH 613
Query: 312 SMTNGGCE 319
S G E
Sbjct: 614 SKIGIGYE 621
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N E Y ++ + D + + +E+++ + L+ F K E++ V
Sbjct: 133 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVW 192
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ GI + YN + L + A+ + + M S IKP++ TY +I G+ K
Sbjct: 193 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 252
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCF 325
G + A + M G E D +
Sbjct: 253 GQTQKAMEKLRDMETRGHEADKITY 277
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH++ + G+ A + EEM GL V N L+ G N ++ IF +
Sbjct: 186 VHALFMDGRGT---EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 242
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ TY +I + + G + E R+ IRP+ + L+ +
Sbjct: 243 -RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 301
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+++ MEK IA YN ++ LC L R +EA+ L+D M RGI+P+L TY LI
Sbjct: 302 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 361
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G+ +G+++ A ++ M N G P + LC+ G+ + A + + + G
Sbjct: 362 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 421
Query: 355 PHFSTMKSLVTGLASISKVAEANE 378
P ST SL+ GL + + A +E
Sbjct: 422 PDDSTYISLIEGLTTEDERAIDDE 445
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 139/327 (42%), Gaps = 7/327 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ A ++ E++ R + N+ + I + + +D A++ F+
Sbjct: 73 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 132
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM G + + L+G + + ++ + G+ TYN ++ +
Sbjct: 133 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 192
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + Y ++ EM K + P+ + +L+ G KE + ++ + M + G+ + V Y
Sbjct: 193 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 252
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I +L K + +E L D + RGI+P+L Y LI+ GN++ A ++ M
Sbjct: 253 TSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 312
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
PD + LC G + A K+ +G P T +L++G + V +
Sbjct: 313 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 372
Query: 376 A----NELIGLMKKRFPKSGDMWNAAL 398
A NE +M K F + +NA +
Sbjct: 373 ALRIRNE---MMNKGFNPTLLTYNALI 396
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 109/248 (43%), Gaps = 6/248 (2%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+ + +++ G LAP D ++I ++ + + ++ E + +R +R
Sbjct: 196 TEAYELVEEMGGKGLAP----DVFTYNILINGHCKEGNVKKALEIFENM-SRRGVRATVV 250
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+ I + + + F+E + G+R + NAL+ S N + I E
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K I P+ TYN +++ C G ++ EM ++ I+P+ + L++G+ +
Sbjct: 311 EKKR-IAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 369
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+D ++ M G + YN IQ LCK + ++A+ ++ M+ GI P+ TY
Sbjct: 370 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 429
Query: 293 LIHGFGKE 300
LI G E
Sbjct: 430 LIEGLTTE 437
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 127/298 (42%), Gaps = 48/298 (16%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE---VKRIFTE---FPKVYGIEP 180
I+ A F E+ K GLR +V + N L+ G S N ++ +KR E FP V+
Sbjct: 241 INEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVF---- 296
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
TY+ +I C+ G + EM + + PN F L+ G + + ++
Sbjct: 297 ---TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIY 353
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M + G+ V YN I LCK+ EAK L+ M RG+KP+ TY LI G KE
Sbjct: 354 QQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKE 413
Query: 301 GNLEGAKKL---------------FASMTNGGC--------------------EPDSYCF 325
G+LE A ++ F ++ +G C +PD +
Sbjct: 414 GDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATY 473
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
M + C+ G+ +T K+ + G VP T L+ GL ++ AN L+ M
Sbjct: 474 TMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 137/305 (44%), Gaps = 10/305 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSI-VLYG---QANMIDHAM 131
+ FS+ ++ + + +F+ Q ++ + N + HS L+ + N+ A
Sbjct: 156 LVFSVLMNAYTDSGYFSDAIQCFRLVR-----KHNLQIPFHSCGYLFDRLMKLNLTSPAW 210
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+EE+ G V N L+ E + +F E K G+ P ++N +I
Sbjct: 211 AFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGK-RGLRPTVVSFNTLING 269
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C+SG+ + + M + P+ + +L+ G KE + +D K+ M G+
Sbjct: 270 YCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ I C R++ + ML +G+KP++ TY LI+G K G+L AKKL
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
MT G +PD + + M C+ G+ E+AL++ + + +G +L++G
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREG 449
Query: 372 KVAEA 376
+V EA
Sbjct: 450 QVIEA 454
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 3/243 (1%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+S+++ G + +D A + F EM GL + L+ G ++ + I+ +
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G++P+ TYN +I C+ GD ++ EM ++ ++P+ + +L+ G KE
Sbjct: 357 LR-KGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E ++ + M K GI + I C+ + EA+ L ML GIKP+ TY
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+IHGF K+G+++ KL M G P + + LC+ G+ + A + A + G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Query: 353 WVP 355
VP
Sbjct: 536 VVP 538
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ +EM K G+ A AL+ G E +R E + GI+P+ TY
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEA-GIKPDDATYT 474
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI FC+ GD + + +L EM+ P + +LL G K+ + ++ +L M
Sbjct: 475 MVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNL 534
Query: 247 GIASGVNVYNIRIQ 260
G+ YNI ++
Sbjct: 535 GVVPDDITYNILLE 548
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%), Gaps = 5/219 (2%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
KR+ +E G++P+ +TY+ ++ + D+ ++ +L EM +RPN + + +
Sbjct: 216 KRMISE-----GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIR 270
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
+ + +D +L+ ME G V Y + I +LC + ++AK L M + KP
Sbjct: 271 VLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP 330
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+L TY L+ FG G+LE K+ ++ M G PD + + LC+ G+ + A +
Sbjct: 331 DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDML 390
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+G VP+ T +L++GL ++ ++ EA EL M+
Sbjct: 391 DVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNME 429
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 37/303 (12%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S + L + I LLEE++T LR N + I + G+A ID
Sbjct: 229 TYSALMVALGRRRDTGTIMDLLEEMETL-GLRPNIYTYTICIRVLGRAGRID-------- 279
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
D YG+ ++++ +E G P+ TY +I + C +G
Sbjct: 280 -DAYGILKTME---------------DE------------GCGPDVVTYTVLIDALCAAG 311
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ +MR S +P+ + L++ F E V + ME G A V Y
Sbjct: 312 KLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYT 371
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I +++LCK + ++A +LD M RGI PNL TY LI G L+ A +LF +M +
Sbjct: 372 ILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESL 431
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G P +Y + +F + + G+ E AL +G +P + + + LA + ++ EA
Sbjct: 432 GVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREA 491
Query: 377 NEL 379
++
Sbjct: 492 KDI 494
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 3/250 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
H+I++ ++N I+ A+ + E+ + L+ G + + EE +IF E P
Sbjct: 861 HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
Y +PN YN +I F ++G+ + + M ++ IRP+ + +L+ + +
Sbjct: 921 D-YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRV 979
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+D + ++ G+ YN+ I L K +R EEA +L M +RGI P L TY L
Sbjct: 980 DDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNAL 1039
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I FG G ++ A K+F + G EP+ + + + G + A V + M G
Sbjct: 1040 ILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099
Query: 354 VPHFSTMKSL 363
P+ T L
Sbjct: 1100 SPNAGTFAQL 1109
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 111/273 (40%), Gaps = 38/273 (13%)
Query: 114 HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+V I YG+ + A+ TFE+M K G+ S+ A NA L E K IF +
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G+ P+S TYN ++K + ++G +L EM + P+
Sbjct: 500 NC-GLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPD----------------- 541
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ V N I +L K R +EA + + + P + TY L
Sbjct: 542 ------------------IIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNIL 583
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKG 352
I G GKEG L A LF SM GC P++ F LC+ + ALK+ CR ++
Sbjct: 584 ITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN- 642
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T +++ GL + A MKK
Sbjct: 643 CSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK 675
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 3/247 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-IE 179
+G++ ID + + EM G + ++ N ++ + S + + ++ E + G
Sbjct: 833 HGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEI--ISGDFS 890
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P TY +I ++G S I EM +PN + +L+ GF K +
Sbjct: 891 PTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDL 950
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M K GI + Y I ++ L R ++A + + G+ P+ +Y +I+G GK
Sbjct: 951 FKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGK 1010
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
LE A LF+ M N G P+ Y + G + A K+ G P+ T
Sbjct: 1011 SRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFT 1070
Query: 360 MKSLVTG 366
+L+ G
Sbjct: 1071 YNALIRG 1077
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 105/255 (41%), Gaps = 1/255 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N+ + A++ F EM G ++ N LL SK +E+ ++ E G +PN T
Sbjct: 802 NITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEM-LCRGCKPNIIT 860
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I + +S + + E+ P +G L+ G K + E+ K+ + M
Sbjct: 861 HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+YNI I K A L M+ GI+P+L +Y L+ G ++
Sbjct: 921 DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVD 980
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A F + G +PD+ + + L + E AL + +G P T +L+
Sbjct: 981 DAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALI 1040
Query: 365 TGLASISKVAEANEL 379
+ V +A ++
Sbjct: 1041 LHFGNAGMVDQAGKM 1055
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 9/272 (3%)
Query: 119 VLYGQANMIDHAMQTFEEMDK-YGLRQSVDALNAL---LLGCILSKNYEEVKRIFTEFPK 174
VL Q +D A + F++ K G + ++ N L LLGC ++ E ++F E K
Sbjct: 761 VLCKQKKALD-AKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNIT---EAALKLFVEM-K 815
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G PN TYN ++ + +S ++ + EM + +PN ++++ K +
Sbjct: 816 NAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSIN 875
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ + + Y I L K RSEEA + + M KPN Y LI
Sbjct: 876 KALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILI 935
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+GFGK GN+ A LF M G PD + + L G + A+ G
Sbjct: 936 NGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLD 995
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P + ++ GL ++ EA L MK R
Sbjct: 996 PDTVSYNLMINGLGKSRRLEEALSLFSEMKNR 1027
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G N+ +YN +I + G + M + ++P+ + L+ + +
Sbjct: 187 GFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTI 246
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L+ ME G+ + Y I I+ L + R ++A +L M G P++ TY LI
Sbjct: 247 MDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDA 306
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G L+ AK+L+ M +PD + G+ ET + A G+ P
Sbjct: 307 LCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPD 366
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T LV L KV +A +++ +M+ R
Sbjct: 367 VVTYTILVEALCKSGKVDQAFDMLDVMRVR 396
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 128/320 (40%), Gaps = 15/320 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D + + + L +A + Q+ LK DL+ ++I++ G+ + A+
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEAWQMFGRLK---DLKLAPTVVTYNILITGLGKEGKLLKAL 597
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK-RIFTEFPKVYGIEPNSETYNKVIK 190
F M + G + NALL C+ + ++ ++F + P+ TYN +I
Sbjct: 598 DLFGSMKESGCPPNTVTFNALL-DCLCKNDAVDLALKMFCRM-TIMNCSPDVLTYNTIIY 655
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-VLQMMEKCGIA 249
+ G + + +M+ K + P+ LL G K+ + ED K V++ + + G+
Sbjct: 656 GLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQ 714
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ V+ ++ + EEA + +G++ I + + LI K+ AKKL
Sbjct: 715 TSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKL 774
Query: 310 FASMTNG---GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
F T P+SY M C E ALK+ G P+ T L+
Sbjct: 775 FDKFTKSLGTHPTPESYNCLMDGLLGCN--ITEAALKLFVEMKNAGCCPNIFTYNLLLDA 832
Query: 367 LASISKVAEANELIGLMKKR 386
++ E EL M R
Sbjct: 833 HGKSKRIDELFELYNEMLCR 852
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 78/202 (38%)
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
ET N +++ G + + M+++ I N + + + L
Sbjct: 123 ETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGK 182
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G YN I L + +EA + M+S G+KP++ TY L+ G+ +
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L M G P+ Y + + L + G + A + + +G P T
Sbjct: 243 TGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTV 302
Query: 363 LVTGLASISKVAEANELIGLMK 384
L+ L + K+ +A EL M+
Sbjct: 303 LIDALCAAGKLDKAKELYTKMR 324
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 1/242 (0%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+EM G++ +V + EE +++F E K++G+ PN TY+ +I +C+
Sbjct: 257 DEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMF-ELMKIHGVVPNLYTYSAMIDGYCK 315
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+G+ Y + E+ + PN FG L+ GF K + + M K G+ + V
Sbjct: 316 TGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYV 375
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I CK EA LL M S + P++ TY LI+G E L A +LF M
Sbjct: 376 YNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMK 435
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
N P S + + C+ E AL +C + G P+ T +L+ G + +
Sbjct: 436 NERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIK 495
Query: 375 EA 376
A
Sbjct: 496 AA 497
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 2/216 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ Y+ + + + G S +L EM ++PN + + + +E+K E+
Sbjct: 228 GLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEA 287
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ ++M+ G+ + Y+ I CK +A L +L + PN+ + L+ G
Sbjct: 288 EKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDG 347
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K L A+ LF M G +P+ Y + + C+ G A+ + + P
Sbjct: 348 FCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPD 407
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK--KRFPKS 390
T L+ GL + ++AEAN L MK + FP S
Sbjct: 408 VFTYTILINGLCTEERLAEANRLFQRMKNERIFPSS 443
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 1/205 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A + A F M K+G+ ++ N L+ G S N E + +E + + P
Sbjct: 348 FCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESL-NLSP 406
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I C + + M+ + I P++ + L+ GF KE+ E +
Sbjct: 407 DVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLC 466
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G+ + ++ I CK++ + A L M +GI P++ TY LI KE
Sbjct: 467 SEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKE 526
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCF 325
N++ A +L++ M G P+ + F
Sbjct: 527 ANMKEALRLYSDMLEAGIHPNDHTF 551
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 7/201 (3%)
Query: 114 HVHSIVLYGQ---ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+V++ +++GQ NM++ AM EM+ L V L+ G + E R+F
Sbjct: 374 YVYNCLIHGQCKSGNMLE-AMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQ 432
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
K I P+S TYN +I FC+ + + +EM + PN F L+ G+ K
Sbjct: 433 RM-KNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKV 491
Query: 231 HKYED-VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ +G +M K GI V Y I + K +EA L ML GI PN T
Sbjct: 492 RNIKAAMGLYFEMTIK-GIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 550
Query: 290 YKHLIHGFGKEGNLEGAKKLF 310
+ L+ GF KEG L A +
Sbjct: 551 FACLVDGFWKEGRLSDAIDFY 571
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 118/261 (45%), Gaps = 3/261 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F+ + K+GLR SV + N L+ G I + +E R+ + G++P+ TY+ +I
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM-RASGVQPDVYTYSVLI 213
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ + EM + PN F L+ G K + + + + M G +
Sbjct: 214 NGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFS 273
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I LCK ++A+ LLD M +G+KP+ TY LI G KEG+LE A +L
Sbjct: 274 PDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFEL 333
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M D + + LCQ G A K+ R + G P T ++
Sbjct: 334 RERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCK 393
Query: 370 ISKVAEANELIGLMKK--RFP 388
V +A+EL+ M++ R P
Sbjct: 394 KGDVKKASELLREMQRNGRVP 414
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 1/281 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I Y ++ I A++ F K+ R D +L + K ++ V + E + G
Sbjct: 73 ITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILEC-G 131
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ +N ++ FC+ G+ S+ + + +RP+ F L+ G+ K ++
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ M G+ V Y++ I LCK R +EA L ML G+ PN T+ LI G
Sbjct: 192 RLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGH 251
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G L+ A ++ M N G PD + Y LC+ G+ + A + KG P
Sbjct: 252 CKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDK 311
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
T +L+ G + A EL M K + D+ AL
Sbjct: 312 ITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTAL 352
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 9/220 (4%)
Query: 103 TRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
+PD+ + +S+++ G + + +D A F EM GL + L+ G +
Sbjct: 202 VQPDV------YTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+ I+ + G P+ TYN +I C+ GD +L EM RK ++P+ +
Sbjct: 256 RLDLAMDIYRQMLN-QGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITY 314
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ G KE E ++ + M K I VY I LC+ R+ +A+ +L ML
Sbjct: 315 TTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLR 374
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
G+KP+ +TY +++ F K+G+++ A +L M G P
Sbjct: 375 VGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH++ + G+ A + EEM GL V N L+ G N ++ IF +
Sbjct: 299 VHALFMDGRGT---EAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSR 355
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ TY +I + + G + E R+ IRP+ + L+ +
Sbjct: 356 -RGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 414
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+++ MEK IA YN ++ LC L R +EA+ L+D M RGI+P+L TY LI
Sbjct: 415 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 474
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G+ +G+++ A ++ M N G P + LC+ G+ + A + + + G
Sbjct: 475 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 534
Query: 355 PHFSTMKSLVTGLASISKVAEANE 378
P ST SL+ GL + + A +E
Sbjct: 535 PDDSTYISLIEGLTTEDERAIDDE 558
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 137/325 (42%), Gaps = 7/325 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ A ++ E++ R + N+ + I + + +D A++ F+
Sbjct: 186 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 245
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM G + + L+G + + ++ + G+ TYN ++ +
Sbjct: 246 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 305
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + Y ++ EM K + + + +L+ G KE + ++ + M + G+ + V Y
Sbjct: 306 GRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 365
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I +L K + +E L D + RGI+P+L Y LI+ GN++ A ++ M
Sbjct: 366 TSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 425
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
PD + LC G + A K+ +G P T +L++G + V +
Sbjct: 426 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKD 485
Query: 376 A----NELIGLMKKRFPKSGDMWNA 396
A NE +M K F + +NA
Sbjct: 486 ALRIRNE---MMNKGFNPTLLTYNA 507
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 100/228 (43%), Gaps = 2/228 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD ++I ++ + + ++ E + R +R + I + + +
Sbjct: 325 LDVFTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTSLIYALSKKGQVQETDK 383
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+E + G+R + NAL+ S N + I E K I P+ TYN +++
Sbjct: 384 LFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR-IAPDDVTYNTLMRGL 442
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C G ++ EM ++ I+P+ + L++G+ + +D ++ M G +
Sbjct: 443 CLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTL 502
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
YN IQ LCK + ++A+ ++ M+ GI P+ TY LI G E
Sbjct: 503 LTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 143/344 (41%), Gaps = 52/344 (15%)
Query: 86 SQANHFNAISQLLEELKTR---PDLRQ-----NERFHVHSIVLYGQANMIDHAMQTFEEM 137
S++ F+ +LL+ ++ R PDL N R + N++ ++ + +
Sbjct: 236 SRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLT----PNLV---VELLDMV 288
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
GLR N LL C N E ++F + + + +P+ TYN +I + G
Sbjct: 289 RNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCGL 347
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA-------- 249
++ + E+ K P+A + LL F +E E V +V Q M+K G
Sbjct: 348 AAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 250 ------------------------SGVN----VYNIRIQSLCKLKRSEEAKALLDGMLSR 281
SG N Y + I SL K RS EA AL+ ML
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDV 467
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GIKP L TY LI G+ K G E A+ F+ M G +PD+ + + L +G E A
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ R ++ G P S + ++ GL ++ + + I M++
Sbjct: 528 WVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEE 571
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 4/270 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H++ + G+ ++ EE+ G + S ++ +L + N EV +I++ K
Sbjct: 829 LHALCVDGR---LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSM-K 884
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G P Y +I+ C+ +++EM + + + +L + Y+
Sbjct: 885 AAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYK 944
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+V Q +++ G+ YN I C+ +R EE +L+ M + G+ P LDTYK LI
Sbjct: 945 KTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLI 1004
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
FGK+ LE A++LF + + G + D + G A K+ + G
Sbjct: 1005 SAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIE 1064
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMK 384
P +TM L+ +S EA +++ +K
Sbjct: 1065 PTLATMHLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 120/273 (43%), Gaps = 4/273 (1%)
Query: 112 RFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
R + I L + + A EM++ + + N++L + ++Y++ +++
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQR 952
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G+EP+ TYN +I +C YS++ +MR + P + L++ F K+
Sbjct: 953 I-KESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
E ++ + + G+ + Y+ ++ +A+ LL M + GI+P L T
Sbjct: 1012 CLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ + GN + A+K+ +++ N E + + + +Y++ ++ +
Sbjct: 1072 LLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKE 1131
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G P V AS SK E +E++ L+K
Sbjct: 1132 GLEPDHRIWTCFVRA-ASFSK--EKSEVMLLLK 1161
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 110/254 (43%), Gaps = 11/254 (4%)
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
LL C+ +++Y E ++F+E ++ G EP+ ++ +C+ G + Y ++ +
Sbjct: 686 TLLHCCVANEHYAEASQVFSEL-RLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAET 744
Query: 211 KSIR----PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
K P TD ++ + K ++ V+ + + G + +N + + +
Sbjct: 745 KGFHFACSPMYTD---IIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECG 801
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE-PDSYCF 325
E A+A+ + M+ G P +++ L+H +G LE + + + G + S
Sbjct: 802 CYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSIL 861
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
M F G +E K+ + A G++P + ++ L +V +A ++ M++
Sbjct: 862 LMLDAFARAGNIFEVN-KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEE 920
Query: 386 -RFPKSGDMWNAAL 398
F +WN+ L
Sbjct: 921 ANFKVELAIWNSML 934
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 122/300 (40%), Gaps = 31/300 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D M ++ + + + QL +++K + + I G+AN A
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAAL 460
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM G++ ++ +AL+ G + EE + F+ + G +P++ Y+ ++
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLL 519
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGIASGV 252
++ + + +M P+ + + L++ G KE++ +DV K ++ ME+ CG+ + +
Sbjct: 520 RGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGM-NPL 578
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG----------- 301
+ ++ ++ C + A L ++ G + DT ++ + G
Sbjct: 579 EISSVLVKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEF 634
Query: 302 ---NLEGAKKLF--------ASMTNGGCEPDSYCFFMFTYFLCQGGE--YETALKVCRAS 348
+ G+K+L + N G D Y + C GG YET L C A+
Sbjct: 635 LKEHASGSKRLINEALIVLHCKVNNIGAALDEYLADPCVHGWCFGGSTMYETLLHCCVAN 694
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + I A+ ++M + G + L+ G L E + + + G +P
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQP 221
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY V+ C+ GD ++L +M I+ N F ++ K E +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME GI V YN I LC R +A LL ML + I PN+ T+ LI F KE
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KL M +PD+ + + C + A ++ + ++K +P+ T
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V + EL M +R
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQR 427
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ +M+ ++ +V N ++ ++ E +FTE + GI PN TYN
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYN 297
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G S +L+ M K I PN F L+ F+KE K + K+ + M +
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I YN+ I C R +EAK + M+S+ PN+ TY LI+GF K +E
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M+ G ++ + Q G+ ++A V + ++ T L+ G
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 367 LASISKVAEANELIGLMKK 385
L S K+ A + ++K
Sbjct: 478 LCSYGKLDTALVIFKYLQK 496
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 119/273 (43%), Gaps = 2/273 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F +M K S+ N LL +E V + E + GI + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL-GEQMQTLGISHDLYTYS 122
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I FC S ++LA+M + P+ LL G+ + D ++ M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + I L ++ EA AL+D M+ RG +P+L TY +++G K G+++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M + + F LC+ E A+ + KG P+ T SL+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 367 LASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
L + + ++A+ L+ +++K+ + +NA +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 134/320 (41%), Gaps = 15/320 (4%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
F+ + L + H L E++T RP++ ++ + YG+ + A +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL-INCLCNYGRWS---DASRLL 316
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
M + + +V NAL+ E +++ E + I+P++ TYN +I FC
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ-RSIDPDTITYNLLINGFCM 375
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ M K PN + L+ GF K + ED ++ + M + G+
Sbjct: 376 HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVT 435
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y IQ + + A+ + M+S + ++ TY L+HG G L+ A +F +
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKGWVPHFSTMKSLVTGLASISKV 373
E + + + +C+ G+ A + C S+ P T ++++GL S +
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNTMISGLCSKRLL 551
Query: 374 AEANELIGLMKK--RFPKSG 391
EA++L MK+ P SG
Sbjct: 552 QEADDLFRKMKEDGTLPNSG 571
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 89/210 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP+ T + ++ +C S S +++ +M +P+ F L+ G + +K +
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + G + Y + LCK + A LL+ M + IK N+ + +I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K ++E A LF M G P+ + LC G + A ++ + K P+
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ K+ EA +L M +R
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 87/243 (35%), Gaps = 33/243 (13%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +D A Q F+ M ++ N L+ G K E+ +F E + G+ N+ T
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ-RGLVGNTVT 435
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED--------- 235
Y +I+ F ++GD S + +M + + + +LL G K +
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 236 -----------------------VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
VG+ + I V YN I LC + +EA
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L M G PN TY LI ++ + + +L M + G D+ + T L
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Query: 333 CQG 335
G
Sbjct: 616 HDG 618
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 13/307 (4%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKY 140
V + +AN + + ++ E PD F S+++ Y Q +D A + F+EM
Sbjct: 231 VGNVEEANQYVS---MIVEAGLDPDF-----FTYTSLIMGYCQRKDLDSAFKVFKEMPLK 282
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G R++ A L+ G + + +E +F + K P TY +IK+ C S S
Sbjct: 283 GCRRNEVAYTHLIHGLCVERRIDEAMDLFVKM-KDDDCYPTVRTYTVLIKALCGSERKSE 341
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRI 259
+++ EM K I+PN + +L+ + K E ++L QM+EK G+ V YN I
Sbjct: 342 ALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEK-GLMPNVITYNALI 400
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CK E+A +++ M SR ++PN TY LI G+ K N+ A + M
Sbjct: 401 NGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVL 459
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + C+ G +++A ++ +G VP T S++ L +V EA +L
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDL 519
Query: 380 IGLMKKR 386
++++
Sbjct: 520 FDSLEQK 526
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++D Q + EM + + ++ N ++ G N EE + + + G++P+ TY
Sbjct: 198 LVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEA-GLDPDFFTY 256
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I +C+ D S + + EM K R N + L+ G E + ++ + M+
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKD 316
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
V Y + I++LC +R EA L+ M +GIKPN+ TY LI + LE
Sbjct: 317 DDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++L M G P+ + C+ G E AL V ++ P+ T L+
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIK 436
Query: 366 G 366
G
Sbjct: 437 G 437
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 2/277 (0%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
EL +LR N R + I Y + N + AM +M + + V N+L+ G S
Sbjct: 417 ELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
N++ R+ + G+ P+ TY +I S C+S + + +K + PN
Sbjct: 476 GNFDSAYRLLS-LMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVM 534
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G+ K K + +L+ M +N I LC + +EA L + M+
Sbjct: 535 YTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMV 594
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
++P + T LIH K+G+ + A + F M + G +PD++ + F C+ G +
Sbjct: 595 KIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQ 654
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
A + G P T SL+ G + + A
Sbjct: 655 DAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSA 691
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 2/265 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + MI+ A+ E M+ LR + N L+ G +N + + + + + P
Sbjct: 403 YCKRGMIEDALDVVELMESRNLRPNTRTYNELIKG-YCKRNVHKAMGVLNKMLE-RKVLP 460
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I C SG+ S Y +L+ M + + P+ + ++ K + E+ +
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLF 520
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+E+ + V +Y I CK + EA +L+ MLS+ PN T+ LIHG +
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L+ A L M +P + + L + G+++ A + + ++ G P T
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
+ + ++ +A +++ MK+
Sbjct: 641 TTFIQTYCREGRLQDAEDMVAKMKE 665
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 18/225 (8%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PNS T+N +I C G + +M + ++P + +L+ K+ ++ +
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
Q M G + Y IQ+ C+ R ++A+ ++ M G+ P+L TY LI G+G
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGD 684
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL-------CQGG-----------EYETA 341
G A + M + GCEP + F L +GG E++
Sbjct: 685 LGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIV 744
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+++ + G P+ + + L+ G+ I + A ++ M+++
Sbjct: 745 VELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQK 789
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN ++ S G + + EM + PN + ++ G+ K E+ + + M+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G+ Y I C+ K + A + M +G + N Y HLIHG E ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A LF M + C P + + LC AL + + KG P+ T L+
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 365 TGLASISKVAEANELIGLM 383
L S K+ +A EL+G M
Sbjct: 366 DSLCSQCKLEKARELLGQM 384
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN + SL + +E K + ML + PN+ TY +++G+ K GN+E A + +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 312 SMTNGGCEPDSYCFFMFTYFL---CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ G +PD FF +T + CQ + ++A KV + KG + L+ GL
Sbjct: 243 MIVEAGLDPD---FFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLC 299
Query: 369 SISKVAEANELIGLMK 384
++ EA +L MK
Sbjct: 300 VERRIDEAMDLFVKMK 315
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYE 234
+G+ PN+++Y K++ CE G+ + M++K I P+ F LL+ K K+
Sbjct: 754 HGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHN 813
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ KV+ M G + I I L K E ++ +L G + +K +I
Sbjct: 814 EAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIII 873
Query: 295 HGFGKEGNLEGAKKLFASMTNGGC 318
G GK+G +E +LF M GC
Sbjct: 874 DGVGKQGLVEAFYELFNVMEKNGC 897
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 37/266 (13%)
Query: 79 SIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+I + +L + F+ + +++ T+PD F I Y + + A
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTF----IQTYCREGRLQDAEDMVA 661
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-----YGIEPNSETYNKVIK 190
+M + G+ + ++L+ K Y ++ R + F + G EP+ T+ +IK
Sbjct: 662 KMKENGVSPDLFTYSSLI------KGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIK 715
Query: 191 SFCE-------SGDSSS-----------VYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
E G+ V +L +M + PNA + L+ G +
Sbjct: 716 HLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGN 775
Query: 233 YEDVGKVL-QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
KV M +K GI+ V+N + CKL++ EA ++D M+ G P L++ K
Sbjct: 776 LRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCK 835
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGG 317
LI K+G E +F ++ G
Sbjct: 836 ILICRLYKKGEKERGTSVFQNLLQCG 861
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 2/175 (1%)
Query: 124 ANMI--DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
+NM+ D ++ E+M ++G+ + + L+LG N +++F + GI P+
Sbjct: 736 SNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPS 795
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+N ++ C+ + ++ +M P +L+ YK+ + E V Q
Sbjct: 796 ELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQ 855
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ +CG + I I + K E L + M G + TY LI G
Sbjct: 856 NLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +Y + + A++ + M G++ ++ + L+ G + K++ +F + K G
Sbjct: 476 INMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKD-G 534
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +IK+FC G+ ++ EM+++ RP + F ++ GF + +
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRAL 594
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ MM + G V+ +N + L + ++ E+A +LD M G+ P+ TY ++HG+
Sbjct: 595 EIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGY 654
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A + F M N G + D + + C+ G ++AL V R A+ +
Sbjct: 655 AALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNT 714
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
L+ G A + EA +L+ M +
Sbjct: 715 FVYNILIDGWARRGDIWEAADLMQQMNQ 742
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 134/309 (43%), Gaps = 2/309 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI V ++ + A ++ K R N + + I Y QA +D A
Sbjct: 365 VTYSIVVGGFAKFGNAEAADCWFKKAKER-HTNLNAYIYGNIIYAYCQACNMDRAEALVR 423
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D + ++ G + +N E+ +F K G P+ TY +I + +
Sbjct: 424 EMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRL-KECGFAPSVITYGCLINMYTKI 482
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + M+ I+ N + +L+ GF K + + V + + K G+ V +Y
Sbjct: 483 GKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLY 542
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I++ C + + A ++ M +P T+ +IHGF + G + A ++F M
Sbjct: 543 NNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRR 602
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + F L + + E A+++ G P T +++ G A++ +
Sbjct: 603 SGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGK 662
Query: 376 ANELIGLMK 384
A E M+
Sbjct: 663 AFEYFTKMR 671
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 148/390 (37%), Gaps = 52/390 (13%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+LK +N F + + L P+ L +I + N AI + E K R
Sbjct: 516 KLKDWTNAFAVFEDVIKDGLKPDVVLYN---NIIKAFCGMGNMDRAIHMVKEMQKER--C 570
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R R + I + +A + A++ F+ M + G +V NAL+LG + + E+
Sbjct: 571 RPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVE 630
Query: 168 IFTEFPKVYGIEPNSETYNKV-----------------------------------IKSF 192
I E + G+ P+ TY + +K+
Sbjct: 631 ILDEM-ALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKAC 689
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+SG S ++ EM + I N + +L+ G+ + + ++Q M + G+ +
Sbjct: 690 CKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDI 749
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ Y I + CK A ++ M + G+KPN+ TY LIHG+ E A F
Sbjct: 750 HTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEE 809
Query: 313 MTNGGCEPDSYCFF-MFTYFLCQGGE-----YETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G +PD + + T L + Y L +CR + T
Sbjct: 810 LKLAGLKPDKAVYHCLMTSLLSRATVAEAYIYSGILSICREMIEFELTVDMGTAVYWSKC 869
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNA 396
L I ++ EL ++K FP WN
Sbjct: 870 LRKIERI--GGELTQTLQKTFPPD---WNT 894
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 118/315 (37%), Gaps = 38/315 (12%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNA 151
+S+ LE K + +S+++ G + D +A FE++ K GL+ V N
Sbjct: 485 VSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNN 544
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
++ N + + E K P S T+ +I F +G+ I MRR
Sbjct: 545 IIKAFCGMGNMDRAIHMVKEMQKER-CRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRS 603
Query: 212 SIRPNATDFGLLLAGFYKEHKYE--------------------------------DVGKV 239
P F L+ G ++ K E D GK
Sbjct: 604 GCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKA 663
Query: 240 LQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ K G+ V Y +++ CK R + A A+ M ++ I N Y LI G
Sbjct: 664 FEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDG 723
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ + G++ A L M G +PD + + F C+ G+ A K A G P+
Sbjct: 724 WARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPN 783
Query: 357 FSTMKSLVTGLASIS 371
T +L+ G A+ S
Sbjct: 784 VKTYTTLIHGWANAS 798
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 127/311 (40%), Gaps = 2/311 (0%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R F + V ++ + Q E ++ R + + + I Y ++ A+
Sbjct: 294 RREFGLMVGYYARRGDMHRARQTFESMRAR-GIDPSSHVYTSLIHAYAVGRDMEEALSCV 352
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M++ G+ S+ + ++ G N E F + K N+ Y +I ++C+
Sbjct: 353 RKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKK-AKERHTNLNAYIYGNIIYAYCQ 411
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + +++ EM + I + ++ G+ E V + +++CG A V
Sbjct: 412 ACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVIT 471
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I K+ + +A + M S GIK N+ TY LI+GF K + A +F +
Sbjct: 472 YGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVI 531
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +PD + C G + A+ + + + P T ++ G A ++
Sbjct: 532 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMR 591
Query: 375 EANELIGLMKK 385
A E+ +M++
Sbjct: 592 RALEIFDMMRR 602
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 81/212 (38%), Gaps = 19/212 (8%)
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
SK +EE + F KV +P E + V+ +F + +P+
Sbjct: 255 SKWHEEREGSTKAFRKVLDTQP--ENWQAVVSAF-----------------ERIKKPSRR 295
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+FGL++ + + + + M GI +VY I + + EEA + + M
Sbjct: 296 EFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKM 355
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
GI+ +L TY ++ GF K GN E A F ++Y + Y CQ
Sbjct: 356 NEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNM 415
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ A + R +G +++ G I
Sbjct: 416 DRAEALVREMEEEGIDAPLDIYHTMMDGYTMI 447
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 143/317 (45%), Gaps = 12/317 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMID 128
D + ++ + L +A + +L+ + +PD+ ++ ++ G +A +D
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV------TYNTIIDGLCKAQAVD 321
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + M ++ + N L+ G + + ++EV R E G++P+ TY+ +
Sbjct: 322 RADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM-YARGLDPDVVTYSLL 380
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C++G + I M RK I+PN T +G+LL G+ D+ +L +M GI
Sbjct: 381 LDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGI 440
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ ++NI + + K +EA + M G+ P++ TY LI K G ++ A
Sbjct: 441 SPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVL 500
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
F M N G P+S F Y LC +E A ++ +G P+ +++ L
Sbjct: 501 KFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 369 SISKVAEANELIGLMKK 385
+ +V A LI M++
Sbjct: 561 NEGQVMVAQRLIDSMER 577
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++ + TY+ +I C++ +L M K ++P+ + ++ G K +
Sbjct: 229 GVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 288
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
VLQ M G+ V YN I LCK + + A +L M+ + +KP++ TY LIHG
Sbjct: 289 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHG 348
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ G + + M G +PD + + +LC+ G+ A K+ + KG P+
Sbjct: 349 YLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPN 408
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
+ L+ G A+ +A+ +L+ LM
Sbjct: 409 VTIYGILLHGYAARGAIADLTDLLDLM 435
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 5/266 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFT 170
++ +IVL Y + MID AM F M ++GL V L+ C L + + V + F
Sbjct: 445 YIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLK-FN 503
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
+ G+ PNS +N ++ C + EM + +RPN F ++ E
Sbjct: 504 QMIN-DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNE 562
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+ +++ ME+ G+ V YN I C R++EA LLD M+S G+KP+L +Y
Sbjct: 563 GQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISY 622
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
L+ G+ K G ++ A LF M G P + + L + A ++ +
Sbjct: 623 DTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIK 682
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEA 376
G T ++ GL + V EA
Sbjct: 683 SGQQWDIYTYNIILNGLCKTNCVDEA 708
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A + M G++ V N ++ G ++ + + + G++P+
Sbjct: 246 KAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMID-KGVKPDV 304
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I C++ +L M K ++P+ + L+ G+ ++++V + L+
Sbjct: 305 VTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEE 364
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G+ V Y++ + LCK + EA+ + M+ +GIKPN+ Y L+HG+ G
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ L M G P++Y F + + + A+ + G P T
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGI 484
Query: 363 LVTGLASISKVAEA 376
L+ L + +V +A
Sbjct: 485 LIDALCKLGRVDDA 498
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 103/200 (51%), Gaps = 3/200 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M++ G+R +V + N L+ G L+ +E ++ V G++P+ +Y+ ++
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSV-GLKPDLISYDTLL 626
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ +C++G + Y + EM RK + P A + +L G + ++ + ++ M K G
Sbjct: 627 RGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQ 686
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YNI + LCK +EA + + S+ ++PN+ T+ +I K G + A L
Sbjct: 687 WDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDL 746
Query: 310 FASMTNGGCEPD--SYCFFM 327
FAS+ + G P+ +YC M
Sbjct: 747 FASIPSHGLVPNVVTYCIMM 766
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 3/267 (1%)
Query: 123 QANMIDHAMQTF-EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IE 179
A +D AM M ++G +V + N LL G K EE + + G
Sbjct: 137 DAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCT 196
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN +I C++ +L M K ++ + + ++ G K + V
Sbjct: 197 PNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGV 256
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
LQ M G+ V YN I LCK + + A+ +L M+ +G+KP++ TY +I G K
Sbjct: 257 LQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCK 316
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
++ A + M + +PD + + GE++ ++ A+G P T
Sbjct: 317 AQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVT 376
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
L+ L K EA ++ M ++
Sbjct: 377 YSLLLDYLCKNGKCTEARKIFYCMIRK 403
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 7/283 (2%)
Query: 115 VHSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
++ I+L+G A I + M G+ + N +L +E IF+
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ +G+ P+ TY +I + C+ G +M + PN+ F L+ G +
Sbjct: 471 SQ-HGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDR 529
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+E ++ M G+ V +N + +LC + A+ L+D M G++PN+ +Y
Sbjct: 530 WEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNT 589
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI G G + A +L M + G +PD + C+ G + A + R + KG
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKG 649
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
P T +++ GL + +EA EL M KSG W+
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEAKELYLNM----IKSGQQWD 688
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + F EM G+R +V N ++ +R+ +V G+ PN +YN
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERV-GVRPNVISYNT 589
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C +G + +L M ++P+ + LL G+ K + ++ + + M + G
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKG 649
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ G Y+ +Q L +R EAK L M+ G + ++ TY +++G K ++ A
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAF 709
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
K+F S+ + P+ F + L +GG + A+ + + + G VP+ T ++ +
Sbjct: 710 KIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNI 769
Query: 368 ASISKVAEANELIGLMKK 385
+ E + L M+K
Sbjct: 770 IQEGLLDEFDNLFLAMEK 787
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 98/260 (37%), Gaps = 46/260 (17%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A++ F+E+ + SV A N LL N
Sbjct: 30 IDDALKLFDELLPHARPASVRAFNHLL--------------------------------N 57
Query: 187 KVIKSFCESGD--SSSVYSILAEMRRKSIRPNATDFGLLLAGFYK----EHKYEDVGKVL 240
V ++ C S + S+++ +A +RP+ + +L F + EH + G +L
Sbjct: 58 VVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLIL 117
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEA-KALLDGMLSRGIKPNLDTYKHLIHGFGK 299
K G V N + LC KR +EA LL M G PN+ + L+ G
Sbjct: 118 ----KTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCN 173
Query: 300 EGNLEGAKKLFASMT---NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
E +E A +L +M G C P+ + LC+ + A V + + KG
Sbjct: 174 EKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLD 233
Query: 357 FSTMKSLVTGLASISKVAEA 376
T +++ GL V A
Sbjct: 234 VVTYSTIIDGLCKAQAVDRA 253
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 13/267 (4%)
Query: 108 RQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
R + + ++I++ G ++ + + F EM++ G +V N L+ Y ++
Sbjct: 209 RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLI------DAYCKM 262
Query: 166 KRIFTEFPKVY-----GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
RI F + G++PN +YN +I C G + IL EM K P+ +
Sbjct: 263 GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 322
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
LL G+ KE + + M + G++ V Y I S+CK + A D M
Sbjct: 323 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 382
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
RG++PN TY LI GF ++G L A ++ MT G P + F + C E
Sbjct: 383 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 442
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGL 367
AL V + + KG P + ++++G
Sbjct: 443 ALGVVQEMVEKGLAPDVVSYSTIISGF 469
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 36/286 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EEM G N LL G N+ + I E + G+ P+ TY +I
Sbjct: 303 AWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR-NGVSPSVVTYTALI 361
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C++ + + +MR + +RPN + L+ GF ++ + ++L M + G +
Sbjct: 362 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I C L+R EEA ++ M+ +G+ P++ +Y +I GF ++G L+ A ++
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481
Query: 310 ---------------FASMTNGGCE--------------------PDSYCFFMFTYFLCQ 334
++S+ G CE PD + + C
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
G+ AL + + KG++P T L+ GL ++ EA L+
Sbjct: 542 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 587
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 4/279 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV--KRIFTEFPKVYGI 178
Y NMID A+ T G V + N++L + S+ ++ + ++ E + +
Sbjct: 152 YSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSR-V 210
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN TYN +I+ FC G+ EM R PN + L+ + K + ++
Sbjct: 211 SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 270
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L+ M G+ + YN+ I LC+ +EA +L+ M +G P+ TY L++G+
Sbjct: 271 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 330
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KEGN A + A M G P + +C+ A++ +G P+
Sbjct: 331 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 390
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNA 396
T +L+ G + + EA ++ M + F S +NA
Sbjct: 391 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 142/357 (39%), Gaps = 54/357 (15%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ + +A + N + ++++ R LR NER + I + + +++ A +
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILN 413
Query: 136 EMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM + G SV NA + G C+L + EE + E + G+ P+ +Y+ +I FC
Sbjct: 414 EMTESGFSPSVVTYNAFIHGHCVLER-MEEALGVVQEMVE-KGLAPDVVSYSTIISGFCR 471
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G+ + + EM K + P+A + L+ G + + + + Q M G+
Sbjct: 472 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFT 531
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL----- 309
Y I + C +A L D M+ +G P+ TY LI+G K+ AK+L
Sbjct: 532 YTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 591
Query: 310 ---------------------------------------------FASMTNGGCEPDSYC 324
F SM +P
Sbjct: 592 YEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAV 651
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + + C+GG A + + + G+VPH T+ +L+ L E +E+IG
Sbjct: 652 YNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 708
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 90/281 (32%), Gaps = 86/281 (30%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A Q +EM + G+ ++L+ G + E + E + G+ P+ TY
Sbjct: 475 LDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM-GLPPDEFTYT 533
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL------ 240
+I ++C GD + + EM K P+A + +L+ G K+ + + ++L
Sbjct: 534 TLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYE 593
Query: 241 ----------QMMEKCG-------IA---------------------------SGVNVYN 256
++E C +A G VYN
Sbjct: 594 ESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYN 653
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF------------------- 297
+ I C+ +A L M+ G P+ T LI
Sbjct: 654 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRS 713
Query: 298 ----------------GKEGNLEGAKKLFASMTNGGCEPDS 322
KEGN+E + M G P+S
Sbjct: 714 CRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 10/294 (3%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
+++ + L + + +L E+K PD F H I+ G++ I+ ++
Sbjct: 71 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPD-----EFTYHLILDAMGKSMRIEDMLK 125
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM G + + N ++ G + SK +E ++ + G P TY ++
Sbjct: 126 IQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSE-GFSPTPCTYGPLLDGL 184
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ G+ ++ EM PN + +LL G+ E V ++ + M + G+ +
Sbjct: 185 LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 244
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + I +LC R + + + G++P+L TY LIHG GK G LE A L+
Sbjct: 245 KSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYND 304
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G P+ Y + +L + G+ A K+ +AKGW P+ T +L+ G
Sbjct: 305 MEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRG 358
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 1/200 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A F+EM + G + N LL G ++ + E+V +F + G+ P+ ++Y
Sbjct: 190 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE-QGMNPDIKSYT 248
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI + C G + S ++ + P+ + LL+ G K + E+ + MEK
Sbjct: 249 VVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKK 308
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA + YN I L K ++ EA + + +L++G KPN+ TY LI G+ G+ E A
Sbjct: 309 GIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENA 368
Query: 307 KKLFASMTNGGCEPDSYCFF 326
+ M GGC P+S +
Sbjct: 369 FAAYGRMIVGGCRPNSSTYM 388
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 1/255 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
++ID A + F EM + G + +L S E++ +I E G + T
Sbjct: 83 DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNK-GYKSTYVT 141
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I +S ++ ++ + P +G LL G K+ ED + M
Sbjct: 142 YNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEML 201
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+CG +YNI + +E+ L + M+ +G+ P++ +Y +I +G L
Sbjct: 202 ECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLN 261
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
F +T+ G EPD + + + L + G E AL + KG P+ T SL+
Sbjct: 262 DGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLI 321
Query: 365 TGLASISKVAEANEL 379
L K AEA ++
Sbjct: 322 LYLGKAGKAAEAGKM 336
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 124/292 (42%), Gaps = 6/292 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + + + + ++ + ++ EE+ + + ++ ++ G ++ M+D A+
Sbjct: 103 DEFTYHLILDAMGKSMRIEDMLKIQEEMHNK---GYKSTYVTYNTIISGLVKSKMLDEAI 159
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++ G + LL G + N E+ + +F E + G EPN YN ++
Sbjct: 160 NLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLEC-GCEPNCAIYNILLNG 218
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+ +GD+ V + M + + P+ + +++ + + D + + G+
Sbjct: 219 YRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPD 278
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN+ I L K R EEA +L + M +GI PNL TY LI GK G A K++
Sbjct: 279 LITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYE 338
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ G +P+ + + G E A + G P+ ST L
Sbjct: 339 ELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + ++ + G+ + NAL+ G + + + +F+E ++ G +P+ TY+ ++
Sbjct: 53 AHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRL-GCDPDEFTYHLIL 111
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ +S + I EM K + + +++G K ++ + + G +
Sbjct: 112 DAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFS 171
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y + L K E+A+AL D ML G +PN Y L++G+ G+ E +L
Sbjct: 172 PTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCEL 231
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F SM G PD + + LC G L + G P T L+ GL
Sbjct: 232 FESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 291
Query: 370 ISKVAEANELIGLMKKR 386
++ EA L M+K+
Sbjct: 292 SGRLEEALSLYNDMEKK 308
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I+ LCK K + A L+ + G+ +Y LI G E ++ A++LF+ M GC
Sbjct: 41 IRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGC 100
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA-N 377
+PD + + + + + E LK+ KG+ + T ++++GL + EA N
Sbjct: 101 DPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN 160
Query: 378 ELIGLMKKRF 387
LM + F
Sbjct: 161 LYYQLMSEGF 170
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 2/209 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR--PNATDFGLLLAGFYKEHKYEDVG 237
P++ +YN VIKS C S ++ M ++ R P+ F ++ GF+K+ +
Sbjct: 193 PDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC 252
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M + G+ V YN + +LCK + ++A+ +L M+ +G++P+ TY +IHG+
Sbjct: 253 NLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY 312
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ + + K+F MT+ G PD+ F F LC+ G + A ++ + KG +P
Sbjct: 313 SCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDI 372
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
+ L+ G A+ + A+ N L M +
Sbjct: 373 VSYSILLHGYATEGRFADMNNLFHSMADK 401
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 12/273 (4%)
Query: 122 GQANMIDHAMQTFEEMDK--YGLRQSVD--------ALNALLLGCILSKNYEEVKRIFTE 171
G N I A+ MDK + LRQ VD NA++ G S +++E ++F +
Sbjct: 268 GTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRK 327
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G+ P++ T++ + S C+ G S I M K P+ + +LL G+ E
Sbjct: 328 MTS-KGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEG 386
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++ D+ + M GI S + NI I + K +EA + M +G++PN+ TY
Sbjct: 387 RFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYS 446
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI F + G L A + F+ M + G EP++ + + C G+ A + M+K
Sbjct: 447 TLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSK 506
Query: 352 GW-VPHFSTMKSLVTGLASISKVAEANELIGLM 383
G P+ S++ L +V +A ++ L+
Sbjct: 507 GLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV 539
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 116/251 (46%), Gaps = 3/251 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A+ + M K G R S D + N ++ G + +F E + G+ P+ TYN
Sbjct: 214 ALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQ-KGVVPDVGTYNS 272
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ + C++ +L +M K + P+ + ++ G+ +++ K+ + M G
Sbjct: 273 IVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKG 332
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ ++ + SLCK RS++A+ + M ++G P++ +Y L+HG+ EG
Sbjct: 333 LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMN 392
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF SM + G + +C + + G + A+ V +G P+ T +L++
Sbjct: 393 NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAF 452
Query: 368 ASISKVAEANE 378
+ ++A+A E
Sbjct: 453 CRMGRLADAME 463
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 42/288 (14%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQ 144
L +A F IS+++ + RP++ +HS+ + G+ + A F + G R
Sbjct: 493 LVKAKEF--ISEMMSKGLHRPNIVFFSSI-IHSLCIEGR---VMDAQDVFNLVIHIGDRP 546
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
++ N+L+ G L E+ + V GIEP+ T N ++ +C+SG +
Sbjct: 547 TIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV-GIEPDVVTNNTLVSGYCKSGKIDDGLIL 605
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC- 263
EM K ++P + ++L G + + K+ M G A ++ Y I ++ LC
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Query: 264 ----------------------------------KLKRSEEAKALLDGMLSRGIKPNLDT 289
K++R EEA L + + G+ PN+ T
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVST 725
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
Y +I KEG++E A +F+SM GC P S L Q G+
Sbjct: 726 YGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGD 773
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 44/345 (12%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA--NMIDHAM 131
D +++SI + + F ++ L + + + H +I++ A M+D AM
Sbjct: 371 DIVSYSILLHGYATEGRFADMNNLFHSMADKGIV---SNCHCINILISAHAKRGMMDEAM 427
Query: 132 QTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F EM G+R +V + L+ C + + + +++ F++ + GIEPN+ Y+ +I
Sbjct: 428 LVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEK-FSQMISI-GIEPNTAVYHSLIH 485
Query: 191 SFCESGDSSSVYSILAEMRRKSI-RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC GD ++EM K + RPN F ++ E + D V ++ G
Sbjct: 486 GFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDR 545
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE----- 304
+ +N I C + + E+A +LD M+S GI+P++ T L+ G+ K G ++
Sbjct: 546 PTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLIL 605
Query: 305 ------------------------------GAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
AKK+F M + G D + + LC+
Sbjct: 606 FREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCR 665
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ A+ + A + + +++ L + + EAN+L
Sbjct: 666 NDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDL 710
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 2/135 (1%)
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG--IKPNLDTYK 291
E V +L M + YN I+SLC RS+EA ++ M G P++ ++
Sbjct: 177 EAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 236
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
+IHGF K+G + A LF M G PD + LC+ + A V R + K
Sbjct: 237 TVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDK 296
Query: 352 GWVPHFSTMKSLVTG 366
G P T +++ G
Sbjct: 297 GVEPDGVTYNAIIHG 311
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 4/158 (2%)
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEA-KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G+ +G ++ LC KR++EA LL M P+ +Y +I +
Sbjct: 152 RAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRS 211
Query: 304 EGAKKLFASMT--NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A + M G C PD F + + GE A + + KG VP T
Sbjct: 212 QEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYN 271
Query: 362 SLVTGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
S+V L + +A ++ ++ K G +NA +
Sbjct: 272 SIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAII 309
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 127/309 (41%), Gaps = 49/309 (15%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PKVY-------------- 176
M+ YG++ +V N ++ G L +E +IF P Y
Sbjct: 243 MEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERR 302
Query: 177 --------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
G+ PN+ TYN +I C GD ++ EM + I + + L
Sbjct: 303 IEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ + E + E+ +++ M + G+ V YNI+I C+ +++A +L D M+ +
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
I+P ++TY LI FGK + A++ F G PD F C G + A
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR---------------F 387
++ + VP T +L+ G KV EA +L+ MK+R +
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542
Query: 388 PKSGDMWNA 396
K GDM +A
Sbjct: 543 SKRGDMKDA 551
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 1/252 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A +EEM K ++ S+ N +++ + + + + F +VYG++PN TYN
Sbjct: 198 IKMAWFVYEEMVKMNIKSSIVTFN-IMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYN 256
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI +C G + I M+ K+++P+ + ++ KE + E+ VL + +
Sbjct: 257 TVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES 316
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ YN I C ++A A D M++RGI ++ TY LIH E +E A
Sbjct: 317 GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEA 376
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + M G EPD + + C+ G + AL + + K P T SL+
Sbjct: 377 EDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDV 436
Query: 367 LASISKVAEANE 378
++++EA E
Sbjct: 437 FGKRNRMSEAEE 448
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A +EM G+ SV N L+ L K EE + + E + G+EP+ TYN
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM-REKGVEPDVVTYN 396
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I +C G++ S+ EM K+IRP + L+ F K ++ + + + K
Sbjct: 397 IQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKE 456
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + ++N I C + A LL M + + P+ T+ L+ G+ +E +E A
Sbjct: 457 GMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEA 516
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KKL M G +PD + + G+ + AL+V ++ G+ P T +L+ G
Sbjct: 517 KKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQG 576
Query: 367 LASISKVAEANELIGLMKKR 386
+ I + A EL+ M+ +
Sbjct: 577 YSKIGEADHAEELLREMQSK 596
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALL--LG--CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
A+ F+EM + +R +V+ +L+ G +S+ E+ K+ E G+ P+ +
Sbjct: 411 ALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKE-----GMLPDIIMF 465
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I C +G+ + +L EM + P+ F L+ G+ +E K E+ K+L M++
Sbjct: 466 NALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKE 525
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
GI YN I K ++A + D MLS G P L TY LI G+ K G +
Sbjct: 526 RGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADH 585
Query: 306 AKKLFASMTNGGCEPDSYCFF 326
A++L M + G PD +
Sbjct: 586 AEELLREMQSKGITPDDSTYL 606
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 107/230 (46%), Gaps = 2/230 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++I ++ + + L +E+ + ++R + I ++G+ N + A +
Sbjct: 391 DVVTYNIQINGYCRCGNAKKALSLFDEMVEK-NIRPTVETYTSLIDVFGKRNRMSEAEEK 449
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F++ K G+ + NAL+ G ++ N + ++ E + P+ T+N +++ +C
Sbjct: 450 FKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA-KVVPDEVTFNTLMQGYC 508
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+L EM+ + I+P+ + L++G+ K +D +V M G +
Sbjct: 509 RERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLL 568
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
YN IQ K+ ++ A+ LL M S+GI P+ TY ++I +L
Sbjct: 569 TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 103/236 (43%), Gaps = 1/236 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + E ++F E ++ + PNS TYN +I C +G+ ++ M
Sbjct: 284 NTLISGFVREGKIEVATKVFDEM-SLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMV 342
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+RPN +G LL G YK ++ V +L+ M G+ Y I LCK E
Sbjct: 343 SHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLE 402
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA LLD ML + P++ T+ LI+GF + G + AK++ M G P+ +
Sbjct: 403 EAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLI 462
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
Y C+ G + AL G V T LV K+ EA + M +
Sbjct: 463 YNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSR 518
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 1/242 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M+ A+QTF M GL SV N ++LG ++ + ++ F + GI P+ T+
Sbjct: 120 MVGDAVQTFYLMGFRGLNPSVYTCN-MVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATF 178
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ + CE G + +L +M + P A + LL + K+ +Y+ +++ M
Sbjct: 179 NILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMAS 238
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
GI V YN+ I +LC+ RS + LL M + PN TY LI GF +EG +E
Sbjct: 239 KGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEV 298
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A K+F M+ P+S + C G AL++ ++ G P+ T +L+
Sbjct: 299 ATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLN 358
Query: 366 GL 367
GL
Sbjct: 359 GL 360
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 87/209 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI + TYN I + C S+ Y +L MRR + PN + L++GF +E K E
Sbjct: 240 GIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVA 299
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV M + YN I C EA L+D M+S G++PN TY L++G
Sbjct: 300 TKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNG 359
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K + M GG + LC+ G E A+++ + P
Sbjct: 360 LYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPD 419
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T L+ G + K+ A E++ M K
Sbjct: 420 VVTFSVLINGFFRVGKINNAKEIMCKMYK 448
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 1/240 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A + F+EM + L + N L+ G + N E R+ + +G+ PN TY
Sbjct: 296 IEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLM-DVMVSHGLRPNEVTYG 354
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ ++ + V SIL MR +R + + ++ G K E+ ++L M K
Sbjct: 355 ALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKV 414
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ V +++ I ++ + AK ++ M G+ PN Y LI+ + K G L+ A
Sbjct: 415 SVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEA 474
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+A M + G D + + C+ G+ E A G P+ T ++ G
Sbjct: 475 LNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIING 534
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 36/252 (14%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A++ + M +GLR + ALL G + + V I E ++ G+ + +Y
Sbjct: 331 IGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSIL-ERMRMGGVRVSHISYT 389
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++G +L +M + S+ P+ F +L+ GF++ K + +++ M K
Sbjct: 390 AMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKT 449
Query: 247 GIA--------------------SGVNVY---------------NIRIQSLCKLKRSEEA 271
G+ +N Y N+ + + C+ + EEA
Sbjct: 450 GLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEA 509
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ ++ M G+ PN T+ +I+G+G G+ A +F M + G P + +
Sbjct: 510 EYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKG 569
Query: 332 LCQGGEYETALK 343
LC GG ALK
Sbjct: 570 LCIGGHINEALK 581
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 150/353 (42%), Gaps = 47/353 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV--HSIVLYGQANMIDHAM 131
D +AF++ + + S+ + ++ +L +K++ N F++ ++I+L+G A HAM
Sbjct: 700 DTVAFNVIIDQYSRKGKTSKVNDILSTMKSK-----NLCFNLATYNILLHGYAK--RHAM 752
Query: 132 ----QTFEEMDKYGLRQSVDALNALLLGCILSKNYE------------------------ 163
+++M ++G + ++L+LG SK+++
Sbjct: 753 ARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNML 812
Query: 164 --------EVKRIFTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
E+K+ F ++ + + PN +TYN + + D + +L +
Sbjct: 813 ITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGS 872
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
P + L+ G + + K+ M+ GI+S + ++ L K+ E A
Sbjct: 873 VPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIW 932
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+LD ML I P + T+ L+H + KE N+ A +L + M + + D + + LC
Sbjct: 933 VLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLC 992
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ E A K+ + P+ S L+ + + E+ +L+ ++ R
Sbjct: 993 ANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 99/241 (41%), Gaps = 35/241 (14%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK----- 232
+EP++ +N +I + G +S V IL+ M+ K++ N + +LL G+ K H
Sbjct: 697 VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCF 756
Query: 233 --YEDVG----------------------------KVLQMMEKCGIASGVNVYNIRIQSL 262
Y+D+ K+L+ + G +N+ I
Sbjct: 757 MLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKF 816
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C+ ++A L+ M + PN+DTY L +G + + A ++ + G P +
Sbjct: 817 CERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTN 876
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ +C+ G + A+K+ G H M ++V GLA+ K+ A ++ L
Sbjct: 877 KQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDL 936
Query: 383 M 383
M
Sbjct: 937 M 937
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN Y ++ + G + + I EM K + P+ F +++ + ++ K V
Sbjct: 662 LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L M+ + + YNI + K L M+ G P+ ++ LI G+
Sbjct: 722 DILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGY 781
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ + + A K+ +T G D + F M C+ E + A ++ + +P+
Sbjct: 782 CQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNV 841
Query: 358 STMKSLVTGLASISKVAEANELIGLM 383
T +L GL S +A+ ++ ++
Sbjct: 842 DTYNALFNGLIRTSDFHKAHRVLQVL 867
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 119/306 (38%), Gaps = 47/306 (15%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG + A F++M+ +G S+ LL G + + E + F + P
Sbjct: 535 YGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCI----P 590
Query: 181 NSE---TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
N+ +N + S C SG+ S +++ EM P+ + L+AG K+ K V
Sbjct: 591 NAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKI--VA 648
Query: 238 KVL---QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP--------- 285
+L + +EK ++ VY + L K + A + + ML++ ++P
Sbjct: 649 ALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVII 708
Query: 286 --------------------------NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
NL TY L+HG+ K + L+ M G
Sbjct: 709 DQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFL 768
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + + CQ ++ A+K+ R +G V T L+T +++ +A EL
Sbjct: 769 PDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFEL 828
Query: 380 IGLMKK 385
+ M +
Sbjct: 829 VKQMNQ 834
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 134/331 (40%), Gaps = 7/331 (2%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
++LD S+ P D + FS+ ++ + N +++ ++ + L N +
Sbjct: 406 QLLDDMLKVSVNP----DVVTFSVLINGFFRVGKINNAKEIMCKM-YKTGLVPNGILYST 460
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
I Y + + A+ + M+ G N L+ EE + ++
Sbjct: 461 LIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRM- 519
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++PNS T++ +I + SGD+ +S+ +M P+ +G LL G +
Sbjct: 520 GLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEA 579
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K + A ++N ++ S C+ +A AL++ M++ P+ TY +LI G
Sbjct: 580 LKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAG 639
Query: 297 FGKEGNLEGAKKLFA-SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K+G + A L ++ G P+ + L + G AL + + K P
Sbjct: 640 LCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEP 699
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
++ + K ++ N+++ MK +
Sbjct: 700 DTVAFNVIIDQYSRKGKTSKVNDILSTMKSK 730
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 72/170 (42%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N F LL+ + D + +M G+ V N+ + SL K ++ + +
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
GML++GI P++ T+ L++ + G + A L M G P + + + C+
Sbjct: 164 KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKK 223
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G Y+ A ++ +KG T + L S+ A+ L+ M++
Sbjct: 224 GRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRR 273
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH++ + G+ A + EEM GL V N L+ G N ++ IF +
Sbjct: 633 VHALFMDGRGT---EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 689
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ TY +I + + G + E R+ IRP+ + L+ +
Sbjct: 690 -RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 748
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+++ MEK IA YN ++ LC L R +EA+ L+D M RGI+P+L TY LI
Sbjct: 749 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 808
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G+ +G+++ A ++ M N G P + LC+ G+ + A + + + G
Sbjct: 809 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 868
Query: 355 PHFSTMKSLVTGLASISKVAEANE 378
P ST SL+ GL + + A +E
Sbjct: 869 PDDSTYISLIEGLTTEDERAIDDE 892
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 128/301 (42%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ A ++ E++ R + N+ + I + + +D A++ F+
Sbjct: 520 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 579
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM G + + L+G + + ++ + G+ TYN ++ +
Sbjct: 580 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 639
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + Y ++ EM K + P+ + +L+ G KE + ++ + M + G+ + V Y
Sbjct: 640 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 699
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I +L K + +E L D + RGI+P+L Y LI+ GN++ A ++ M
Sbjct: 700 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 759
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
PD + LC G + A K+ +G P T +L++G + V +
Sbjct: 760 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 819
Query: 376 A 376
A
Sbjct: 820 A 820
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 6/237 (2%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
G LAP D ++I ++ + + ++ E + R +R + I +
Sbjct: 654 GKGLAP----DVFTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSK 708
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+ + F+E + G+R + NAL+ S N + I E K I P+
Sbjct: 709 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR-IAPDDV 767
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +++ C G ++ EM + I+P+ + L++G+ + +D ++ M
Sbjct: 768 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 827
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
G + YN IQ LCK + ++A+ ++ M+ GI P+ TY LI G E
Sbjct: 828 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 113/253 (44%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ + M + GL+ + ++ G + + + +V I PN Y+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C+ G S ++ EM+ K I P+ + ++ GF ++ D ++LQ M +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I+ V YN I + K + EA L D ML RGI PN TY +I GF K+ L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 379
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F M GC PD + F C + +++ +G V + T +L+ G
Sbjct: 380 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHG 439
Query: 367 LASISKVAEANEL 379
+ + A +L
Sbjct: 440 FCLVGDLNAALDL 452
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+ + + +FTE + GI P+ TYN +I FC SG S +L EM + I P+ +
Sbjct: 271 HSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ F KE K+ + ++ M GI YN I CK R + A+ + M ++
Sbjct: 330 ALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATK 389
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G P++ T+ LI G+ ++ +L M G ++ + + C G+ A
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + + ++ G P T +L+ GL K+ +A E+ M+K
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK 493
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 129/331 (38%), Gaps = 48/331 (14%)
Query: 104 RPDL---------RQNERFHVHS----IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
RPDL R+ R ++S I + + + A+ TF ++ K GL V
Sbjct: 94 RPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFT 153
Query: 151 ALLLGCILSKNYEEVKRIFTEF------PKVY---------------------------- 176
LL G + E F + P V
Sbjct: 154 TLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYED 235
G++P TY ++ C+ GD+ S ++L +M S I PN + ++ K+ ++ D
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ M++ GI + YN I C R +A+ LL ML R I P++ TY LI+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F KEG A +L+ M G P++ + C+ + A + KG P
Sbjct: 334 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 393
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ G ++ + EL+ M +R
Sbjct: 394 DVFTFTTLIDGYCGAKRIDDGMELLHEMPRR 424
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 12/267 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ID M+ EM + GL + N L+ G L + + + G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS-SGVCP 463
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRR-----------KSIRPNATDFGLLLAGFYK 229
+ T N ++ C++G + M++ + P+ + +L+ G
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 523
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K+ + ++ + M GI Y+ I LCK R +EA + M S+ PN+ T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 583
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI+G+ K G ++ +LF M G D+ + Y + G AL + + +
Sbjct: 584 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 643
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T+++++TG S ++ A
Sbjct: 644 SSGVYPDTITIRNMLTGFWSKEELERA 670
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 23/318 (7%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDHAMQT 133
+S + L + + L E++ + PDL F +S+++ + + A Q
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL-----FTYNSMIVGFCSSGRWSDAEQL 312
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSF 192
+EM + + V NAL+ + + E ++ E P+ GI PN+ TYN +I F
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPR--GIIPNTITYNSMIDGF 370
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + + M K P+ F L+ G+ + +D ++L M + G+ +
Sbjct: 371 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I C + A L M+S G+ P++ T L+ G G L+ A ++F +
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 490
Query: 313 MTNG-----------GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
M G EPD + + L G++ A ++ +G VP T
Sbjct: 491 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 362 SLVTGLASISKVAEANEL 379
S++ GL S++ EA ++
Sbjct: 551 SMIDGLCKQSRLDEATQM 568
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 133/320 (41%), Gaps = 14/320 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + ++ ++ + F ++L +E+ R + N + I + + + +D A
Sbjct: 322 SP-DVVTYNALINAFVKEGKFFEAAELYDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAA 379
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F M G V L+ G +K ++ + E P+ G+ N+ TYN +I
Sbjct: 380 EDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR-RGLVANTVTYNTLIH 438
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---- 246
FC GD ++ + +M + P+ LL G K +D ++ + M+K
Sbjct: 439 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDL 498
Query: 247 -------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
G+ V YNI I L + EA+ L + M RGI P+ TY +I G K
Sbjct: 499 DASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ L+ A ++F SM + P+ F C+ G + L++ +G V
Sbjct: 559 QSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAII 618
Query: 360 MKSLVTGLASISKVAEANEL 379
+L+ G + + A ++
Sbjct: 619 YITLIYGFRKVGNINGALDI 638
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I + +NI I+
Sbjct: 65 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCF 124
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G+ P++ T+ L+HG E + A F M C P+
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNV 184
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + M G P T ++V G+ A L+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 383 MKK 385
M++
Sbjct: 245 MEE 247
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 141/322 (43%), Gaps = 12/322 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDH 129
L + F+ ++ L + F +L +++ R PD+ H ++ ++ G + +
Sbjct: 190 LTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDV------HTYTTIINGLCKIGET 243
Query: 130 --AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A F +M + G + V + ++ + E IF+ + K GI PN TYN
Sbjct: 244 VAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFS-YMKAKGISPNIFTYNS 302
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+ C ++L EM +I PN F LL+ F KE + VL+ M + G
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V Y+ + EA+ L D M+++G KP++ +Y LI+G+ K + AK
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF M + G PD + LCQ G A + + + G +P T L+ G
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482
Query: 368 ASISKVAEANELIGLMKKRFPK 389
+A+A L M+ + K
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLK 504
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ F M G+ ++ N+L+ G + E + E + I PN T++
Sbjct: 278 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL-NIMPNIVTFS 336
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ G+ +L M + PN + L+ G+ + + + K+ +M
Sbjct: 337 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK 396
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YNI I CK KR EAK L + M+ +G+ P++ +Y LI G + G L A
Sbjct: 397 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 456
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF +M G PD + + C+ G A ++ RA + P+ L+
Sbjct: 457 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 516
Query: 367 LASISKVAEANEL 379
+ + EA +L
Sbjct: 517 MCKSRNLKEARKL 529
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 101 LKTRPDLRQNERFHVHSIVLYG---QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
LKT ++ +S ++ G QA +++ A + F+ M G + V + N L+ G
Sbjct: 355 LKTMTEMGVEPNVVTYSSLMNGYSLQAEVVE-ARKLFDVMITKGCKPDVFSYNILINGYC 413
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
+K E K++F E G+ P+ +YN +I C+ G + + M P+
Sbjct: 414 KAKRIGEAKQLFNEMIH-QGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDL 472
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ +LL GF K+ ++ + M+ + + +YNI I ++CK + +EA+ L
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSE 532
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
+ +G++PN+ Y +I+G KEG L+ A + F +M GC P+ + + + Q +
Sbjct: 533 LFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKD 592
Query: 338 YETALKVCRASMAKGWVPHFST 359
A+++ KG+V +T
Sbjct: 593 ESRAVQLIGEMREKGFVADVAT 614
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%)
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+V S+ +M + P+ +L+ F++ + + VL + K G+ + +N
Sbjct: 139 DAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTL 198
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I LCK+ + +A L D M++RG +P++ TY +I+G K G A LF M GC
Sbjct: 199 INGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGC 258
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
+PD + LC+ AL + AKG P+ T SL+ GL + S+ EA+
Sbjct: 259 QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASA 318
Query: 379 LIGLM 383
++ M
Sbjct: 319 MLNEM 323
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+EPN TY+ ++ + + + M K +P+ + +L+ G+ K + +
Sbjct: 362 GVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 421
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M G+ + YN I LC+L R EA L ML+ G P+L TY L+ G
Sbjct: 422 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 481
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+G L A +LF +M + +P+ + + +C+ + A K+ +G P+
Sbjct: 482 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 541
Query: 357 FSTMKSLVTGLASISKVAEANE 378
+++ GL + EA E
Sbjct: 542 VQIYTTIINGLCKEGLLDEALE 563
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 5/258 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETY 185
D + ++M+ GL L+ +L+ C + V F+ K+ G++ T+
Sbjct: 139 DAVISLSKQMELAGLSPDTYTLH-MLINCFFQ--LQRVDLGFSVLAKIIKLGLQLTIVTF 195
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I C+ G + +M + +P+ + ++ G K + + + M +
Sbjct: 196 NTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGE 255
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y+ I SLCK +R EA + M ++GI PN+ TY LI G
Sbjct: 256 AGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWRE 315
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A + M + P+ F + C+ G A V + G P+ T SL+
Sbjct: 316 ASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMN 375
Query: 366 GLASISKVAEANELIGLM 383
G + ++V EA +L +M
Sbjct: 376 GYSLQAEVVEARKLFDVM 393
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ F M R + N LL + ++Y + ++ ++ G+ P++ T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I F + +S+LA++ + ++ F L+ G K K+ ++ M
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V+ Y I LCK+ + A L M G +P++ TY +I K+ + A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+F+ M G P+ + + LC + A + M+ +P+ T L+
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341
Query: 367 LASISKVAEANELIGLMKK 385
V EA ++ M +
Sbjct: 342 FCKEGNVFEARGVLKTMTE 360
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYED-VGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
M + RP F LL+ K Y D V + + ME G++ ++ I +L
Sbjct: 111 HMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQL 170
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+R + ++L ++ G++ + T+ LI+G K G A +LF M G +PD + +
Sbjct: 171 QRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTY 230
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC+ GE A + R G P T +++ L +V EA ++ MK
Sbjct: 231 TTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKA 290
Query: 386 R 386
+
Sbjct: 291 K 291
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 5/266 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+H V +G+ +D A +M YG+ V N+L+ G K +
Sbjct: 354 IHGFVTHGR---LDDAKAVLSDMVTSYGIVPDVCTYNSLIYG-YWKKGLVGLALEVLRDM 409
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G +PN +Y ++ FC+ G Y++L EM ++PN F L++ F KEH+
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ ++ + M + G V +N I LC++ + A LL M+S G+ N TY L
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I+ F + G ++ A+KL M G D + LC+ GE + A + + G
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
VP + L+ GL V EA E
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEF 615
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 145/348 (41%), Gaps = 32/348 (9%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM 126
L+ + P F + + L N ++ +L ++ T+ N + I + N
Sbjct: 203 LSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDM-TKHGCVPNSVIYQTLIHSLSKCNR 261
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVK-------RIFTEFPKVYGI 178
++ A+Q EEM G + N ++LG C + E K R FT YG
Sbjct: 262 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321
Query: 179 ----------------------EPNSETYNKVIKSFCESGDSSSVYSILAEMRRK-SIRP 215
+P S +N +I F G ++L++M I P
Sbjct: 322 LMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 381
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + L+ G++K+ +VL+ M G V Y I + CKL + +EA LL
Sbjct: 382 DVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLL 441
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
+ M + G+KPN + LI F KE + A ++F M GC+PD Y F LC+
Sbjct: 442 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 501
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
E + AL + R +++G V + T +L+ ++ EA +L+ M
Sbjct: 502 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 549
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 3/257 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIE 179
Y + ++ A++ +M G + +V + L+ G C L K +E + E G++
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK-IDEAYNLLNEM-SADGLK 450
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ +N +I +FC+ I EM RK +P+ F L++G + + + +
Sbjct: 451 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 510
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M G+ + YN I + + +EA+ L++ M+ +G + TY LI G +
Sbjct: 511 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCR 570
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G ++ A+ LF M G P S + LC+ G E A++ + + +G P T
Sbjct: 571 AGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 630
Query: 360 MKSLVTGLASISKVAEA 376
SL+ GL ++ +
Sbjct: 631 FNSLINGLCRAGRIEDG 647
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 1/254 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A EM GL+ + N L+ E IF E P+ G +P+ T+N
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR-KGCKPDVYTFN 492
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I CE + +L +M + + N + L+ F + + ++ K++ M
Sbjct: 493 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 552
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G YN I+ LC+ ++A++L + ML G+ P+ + LI+G + G +E A
Sbjct: 553 GSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M G PD F LC+ G E L + R A+G P T +L++
Sbjct: 613 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSW 672
Query: 367 LASISKVAEANELI 380
L V +A L+
Sbjct: 673 LCKGGFVYDACLLL 686
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 118/269 (43%), Gaps = 10/269 (3%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
N +D A+ +M K+G + L+ E ++ E + G P++E
Sbjct: 224 VNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM-FLMGCVPDAE 282
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T+N VI C+ + ++ M + P+ +G L+ G K + + + +
Sbjct: 283 TFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI 342
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPNLDTYKHLIHGFGKEGN 302
K + V ++N I R ++AKA+L M+ S GI P++ TY LI+G+ K+G
Sbjct: 343 PK---PTSV-IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGL 398
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A ++ M N GC+P+ Y + + C+ G+ + A + A G P+
Sbjct: 399 VGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNC 458
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSG 391
L++ ++ EA E+ + P+ G
Sbjct: 459 LISAFCKEHRIPEAVEIF----REMPRKG 483
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 6/294 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+++I V + + LL E+ + L+ N I + + + I A++ F E
Sbjct: 420 SYTILVDGFCKLGKIDEAYNLLNEM-SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 478
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCE 194
M + G + V N+L+ G +E+K + G+ N+ TYN +I +F
Sbjct: 479 MPRKGCKPDVYTFNSLISGLC---EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 535
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G+ ++ EM + + + L+ G + + + + + M + G+
Sbjct: 536 RGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS 595
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
NI I LC+ EEA M+ RG P++ T+ LI+G + G +E +F +
Sbjct: 596 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 655
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
G PD+ + +LC+GG A + + G+VP+ T L+ L
Sbjct: 656 AEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLV 709
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 105/287 (36%), Gaps = 67/287 (23%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVI---------------------------------- 189
+ R+ E VY EP ++YN V+
Sbjct: 158 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 217
Query: 190 -KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
K+ C + S S+L +M + PN+ + L+ K ++ + ++L+ M G
Sbjct: 218 MKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGC 277
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH---------------- 292
+N I LCK R EA +++ ML RG P+ TY +
Sbjct: 278 VPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKD 337
Query: 293 ---------------LIHGFGKEGNLEGAKKLFASM-TNGGCEPDSYCFFMFTYFLCQGG 336
LIHGF G L+ AK + + M T+ G PD + Y + G
Sbjct: 338 LFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKG 397
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
AL+V R KG P+ + LV G + K+ EA L+ M
Sbjct: 398 LVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM 444
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N+L+ G + ++ + +F + + G+ P+S + N +I C SG EM
Sbjct: 562 NSLIKGLCRAGEVDKARSLFEKMLR-DGLVPSSISCNILINGLCRSGMVEEAVEFQKEMV 620
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ P+ F L+ G + + ED + + ++ GI YN + LCK
Sbjct: 621 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVY 680
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+A LLD + G PN T+ L+ + L+
Sbjct: 681 DACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLD 715
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A+ +EM+ +G++ + + L+ G I ++ IF + K G
Sbjct: 433 INLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKS-G 491
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN ++++FC+ G+ I M+++ ++P+ F ++ GF +
Sbjct: 492 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAF 551
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
L +M + G A V YN I L + + E+A ++LD M GI PN TY ++ G+
Sbjct: 552 DTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGY 611
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G++ A + F + G + D Y + C+ G ++AL V R M+ +P
Sbjct: 612 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR-EMSFQKIPRN 670
Query: 358 STMKS-LVTGLASISKVAEANELIGLMKK 385
+ + + L+ G A V EA +L+ MK+
Sbjct: 671 TFIYNILIDGWARRGDVWEAADLLKQMKE 699
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 140/310 (45%), Gaps = 2/310 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI +S + N + L +E KT+ D N + + I + Q+ +D A +
Sbjct: 322 VTYSILISGYGKTNDAQSADNLFKEAKTKLD-NLNGIIYSNIIHAHCQSGNMDRAEELVR 380
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D ++++ G + ++ ++ +F K G +P +Y +I + +
Sbjct: 381 EMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERL-KECGFKPTIISYGCLINLYVKV 439
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +I EM I+ N + +L+ GF H + + + + M K G+ +Y
Sbjct: 440 GKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 499
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N+ +++ CK+ + A + + M ++P+ T++ +I GF G+++ A M
Sbjct: 500 NLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRR 559
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + + L + + E A+ V G P+ T ++ G A+ + +
Sbjct: 560 SGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGK 619
Query: 376 ANELIGLMKK 385
A E +K+
Sbjct: 620 AFEYFTKIKE 629
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 135/330 (40%), Gaps = 6/330 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N F I + + L P DR +++ V + + + ++ E ++ + ++ + R
Sbjct: 478 ANAFSIFEDMIKSGLQP----DRAIYNLLVEAFCKMGNMDRAIRIFERMQ-KERMQPSNR 532
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I + A + A T + M + G +V NAL+ G + E+ + +
Sbjct: 533 TFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKM 592
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ GI PN TY +++ + SGD + +++ ++ + + LL K +
Sbjct: 593 -SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 651
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ V + M I +YNI I + EA LL M GI PN+ T+
Sbjct: 652 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTS 711
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
I+ K G+++ A+ + M + G +P+ F + + ALK + G
Sbjct: 712 YINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAG 771
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGL 382
P + LVT L S + V E + G+
Sbjct: 772 LKPDEAAYHCLVTSLLSRATVMEGSTYTGI 801
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/303 (18%), Positives = 115/303 (37%), Gaps = 36/303 (11%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+V Y + HA TFE M G+ + +L+ ++ + E K G
Sbjct: 258 VVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEM-KSEG 316
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
IE TY+ +I + ++ D+ S ++ E + K N + ++ + +
Sbjct: 317 IEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAE 376
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP------------ 285
++++ ME+ GI + ++VY+ + ++ ++ + + + G KP
Sbjct: 377 ELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLY 436
Query: 286 -----------------------NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
N TY LI+GF + A +F M G +PD
Sbjct: 437 VKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDR 496
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+ G + A+++ + P T + ++ G A + A + + L
Sbjct: 497 AIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDL 556
Query: 383 MKK 385
M++
Sbjct: 557 MRR 559
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 7/177 (3%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
++++ V F PK P+ + ++ + + GD + MR + I PNA
Sbjct: 234 EDWQAVVSAFERIPK-----PSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFV 288
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F L+ + ++ M+ GI V Y+I I K ++ A L
Sbjct: 289 FTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAK 348
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQ 334
++ N Y ++IH + GN++ A++L M G + D Y M Y + Q
Sbjct: 349 TKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQ 405
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 134/308 (43%), Gaps = 42/308 (13%)
Query: 123 QANMIDHAMQTFEEMD-KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
A ++ +Q FE ++G + A N LL + + Y+ ++ K + N
Sbjct: 1637 HARDVEPTIQFFEWCHGRHGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKPSSFQAN 1696
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY+ +++ +CE G++ ++L M++ + NA + ++L K K ++ +L
Sbjct: 1697 AFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLH 1756
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M A + YNI I +LCK+ R E+A+ L++ M +R ++ TY LIHG ++G
Sbjct: 1757 SMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKG 1816
Query: 302 N----LEGAKKLFASMTNGGCEPDSY------------------------------CFFM 327
N +E A +LF M + G P S F +
Sbjct: 1817 NGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDL 1876
Query: 328 FTYFL-----CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
TY + + G + A+ + +G +P T S+V G KV EAN+L
Sbjct: 1877 VTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAE 1936
Query: 383 MKKR--FP 388
MK R FP
Sbjct: 1937 MKARGIFP 1944
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 2/198 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ M + A + + M + G + N L+ + ++ +F E P G P+
Sbjct: 1853 RVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMP-TRGCIPDV 1911
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++ FC++G + AEM+ + I PN + + K + +D L
Sbjct: 1912 VTYNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVE 1971
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M K G+ ++ Y I ++CKL + + LL ML +G KPNL T+ + KE N
Sbjct: 1972 MRKEGLVDAIS-YVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESN 2030
Query: 303 LEGAKKLFASMTNGGCEP 320
+ AK + + P
Sbjct: 2031 TDDAKIMIQELRQQHSSP 2048
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 4/240 (1%)
Query: 150 NALLLG-CILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILA 206
N L+ G C V+R F F ++ G P S TY VI + +L
Sbjct: 1806 NTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLD 1865
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
M + + +L+ F K + + M G V YN + CK
Sbjct: 1866 LMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAG 1925
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ EEA L M +RGI PN TY + K G ++ A M G D+ +
Sbjct: 1926 KVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYV 1984
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+C+ G+ + ++ R + KG+ P+ T + L+ S +A +I ++++
Sbjct: 1985 ALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQ 2044
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A M+D AM F EM G V N+++ G + EE ++F E K GI P
Sbjct: 1886 FAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEM-KARGIFP 1944
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY + + ++G ++ L EMR++ + +A + L++ K K + ++L
Sbjct: 1945 NGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGKGKLGFQLL 2003
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
+ M + G + +N+ ++L K +++AK ++ + + P L+
Sbjct: 2004 REMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQHSSPPLN 2051
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 3/304 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D F + +SKL AN F ++L +K R E + YG+ +M A++
Sbjct: 49 DHTTFGVMISKLVSANEFRPAEEMLNRMKEEK-CRITEEIFLSICRGYGRVHMPLDAIRV 107
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M+ +G + + D + ++ +N +V F ++ + G+ + + N +IK+ C
Sbjct: 108 FHKMNDFGCKPT-DKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALC 166
Query: 194 E-SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ SG + + I EM ++ P++ +G L+ G K K + ++ + M+ G + V
Sbjct: 167 KNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSV 226
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+ + LC+ +EA L D M + I+PN+ TY L+ G K G A +L
Sbjct: 227 VTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEM 286
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M +P+ + LC+ G+ A++ +G P ++ G +I K
Sbjct: 287 MVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRK 346
Query: 373 VAEA 376
EA
Sbjct: 347 FQEA 350
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 96/234 (41%), Gaps = 43/234 (18%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EMD G SV + L+ G + N +E +F + K IEPN TY+ ++
Sbjct: 210 AKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKK-KAIEPNVFTYSSLM 268
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C++G S +L M RK +PN + L+ G KE K + + L M+ G+
Sbjct: 269 DGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLK 328
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLD--------------------------------- 276
+Y I C +++ +EA LD
Sbjct: 329 PDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGN 388
Query: 277 ---------GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
GM +RGI + T+ L+ F K+G+L A ++F M GC PD
Sbjct: 389 LNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPD 442
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 89/227 (39%), Gaps = 47/227 (20%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEF 172
+S +++G QA +D AM F++M K + +V ++L+ G C + E ++ +
Sbjct: 229 YSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMV 288
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K + +PN TY+ +I C+ G + L M+ + ++P+A +G ++ GF K
Sbjct: 289 RKRH--KPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRK 346
Query: 233 YEDVGKVLQMM------------------------------------------EKCGIAS 250
+++ L M GI+
Sbjct: 347 FQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISI 406
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ ++ CK +A + D M+ G P+ + ++ GF
Sbjct: 407 DAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGF 453
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + I A++ M + G++ ++ + ++ G + K++ +F + K G
Sbjct: 489 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK-EG 547
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I +FC G+ + EM++ RP F ++ G+ K
Sbjct: 548 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 607
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V MM +CG V+ +N I L + ++ E+A +LD M G+ N TY ++ G+
Sbjct: 608 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 667
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A + F + N G + D + + C+ G ++AL V + A+ +P
Sbjct: 668 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN-IPRN 726
Query: 358 STMKS-LVTGLASISKVAEANELIGLMKK 385
S + + L+ G A V EA +LI MKK
Sbjct: 727 SFVYNILIDGWARRGDVWEAADLIQQMKK 755
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 149/385 (38%), Gaps = 53/385 (13%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
+LK +N F + + + P D + ++ +S + + Q ++E++
Sbjct: 528 VKLKDWANAFAVFEDMVKEGMKP----DVILYNNIISAFCGMGNMDRAIQTVKEMQ---K 580
Query: 107 LRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
LR +++G A D +++ F+ M + G +V N L+ G + + E+
Sbjct: 581 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 640
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSF-------------------------------- 192
I E + G+ N TY K+++ +
Sbjct: 641 AVEILDEM-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 699
Query: 193 ---CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+SG S ++ EM ++I N+ + +L+ G+ + + ++Q M+K G+
Sbjct: 700 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 759
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
++ Y I + K A ++ M + G+KPN+ TY LI G+ + E A
Sbjct: 760 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 819
Query: 310 FASMTNGGCEPDSYCFF-MFTYFLCQGG-----EYETALKVCRASMAKGWVPHFSTMKSL 363
+ M G +PD + + T L + Y + +C+ + G + T
Sbjct: 820 YEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHW 879
Query: 364 VTGLASISKVAEANELIGLMKKRFP 388
L I A EL ++K FP
Sbjct: 880 SKCLCKIE--ASGGELTETLQKTFP 902
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 127/303 (41%), Gaps = 2/303 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S+ V S+A H A +E K R N + I + Q ++ A
Sbjct: 378 VTYSVIVGGFSKAGHAEAADYWFDEAK-RIHKTLNASIYGKIIYAHCQTCNMERAEALVR 436
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ + + ++ G + + ++ +F K G P TY +I + +
Sbjct: 437 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL-KECGFTPTVVTYGCLINLYTKV 495
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + M+ + ++ N + +++ GF K + + V + M K G+ V +Y
Sbjct: 496 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 555
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I + C + + A + M +P T+ +IHG+ K G++ + ++F M
Sbjct: 556 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 615
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + F L + + E A+++ G + T ++ G AS+ +
Sbjct: 616 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 675
Query: 376 ANE 378
A E
Sbjct: 676 AFE 678
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 47/327 (14%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDK 139
V K+S+A +S++++E + +L+ +S+++ G + D +A FE+M K
Sbjct: 495 VGKISKALE---VSRVMKEEGVKHNLK------TYSMMINGFVKLKDWANAFAVFEDMVK 545
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G++ V N ++ N + + E K+ P + T+ +I + +SGD
Sbjct: 546 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPIIHGYAKSGDMR 604
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS--------- 250
+ MRR P F L+ G ++ + E ++L M G+++
Sbjct: 605 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 664
Query: 251 ----------------------GVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G++V Y +++ CK R + A A+ M +R I
Sbjct: 665 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP 724
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
N Y LI G+ + G++ A L M G +PD + + F + G+ A +
Sbjct: 725 RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 784
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASIS 371
A G P+ T +L+ G A S
Sbjct: 785 IEEMEALGVKPNIKTYTTLIKGWARAS 811
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 133/344 (38%), Gaps = 37/344 (10%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R F + V + + + E ++ R + R + I Y +D A+
Sbjct: 307 RTEFGLMVKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMDEALSCV 365
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + G+ S+ + ++ G + + E F E +++ N+ Y K+I + C+
Sbjct: 366 RKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAHCQ 424
Query: 195 SGDSSSVYSILAEMRRKSI-----------------------------------RPNATD 219
+ + +++ EM + I P
Sbjct: 425 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 484
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+G L+ + K K +V ++M++ G+ + Y++ I KLK A A+ + M+
Sbjct: 485 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 544
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
G+KP++ Y ++I F GN++ A + M P + F + + G+
Sbjct: 545 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 604
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+L+V G VP T L+ GL ++ +A E++ M
Sbjct: 605 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 648
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 57/139 (41%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+P+ T+FGL++ + + + + M GI +Y I + + +EA +
Sbjct: 304 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 363
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+ M GI+ +L TY ++ GF K G+ E A F ++ + Y C
Sbjct: 364 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 423
Query: 334 QGGEYETALKVCRASMAKG 352
Q E A + R +G
Sbjct: 424 QTCNMERAEALVREMEEEG 442
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH++ + G+ A + EEM GL V N L+ G N ++ IF +
Sbjct: 628 VHALFMDGRGT---EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSR 684
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ TY +I + + G + E R+ IRP+ + L+ +
Sbjct: 685 -RGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 743
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+++ MEK IA YN ++ LC L R +EA+ L+D M RGI+P+L TY LI
Sbjct: 744 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 803
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G+ +G+++ A ++ M N G P + LC+ G+ + A + + + G
Sbjct: 804 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 863
Query: 355 PHFSTMKSLVTGLASISKVAEANE 378
P ST SL+ GL + + A +E
Sbjct: 864 PDDSTYISLIEGLTTEDERAIDDE 887
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 128/301 (42%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ A ++ E++ R + N+ + I + + +D A++ F+
Sbjct: 515 VTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFD 574
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM G + + L+G + + ++ + G+ TYN ++ +
Sbjct: 575 EMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMD 634
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + Y ++ EM K + P+ + +L+ G KE + ++ + M + G+ + V Y
Sbjct: 635 GRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTY 694
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I +L K + +E L D + RGI+P+L Y LI+ GN++ A ++ M
Sbjct: 695 TALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEK 754
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
PD + LC G + A K+ +G P T +L++G + V +
Sbjct: 755 KRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKD 814
Query: 376 A 376
A
Sbjct: 815 A 815
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 102/237 (43%), Gaps = 6/237 (2%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
G LAP D ++I ++ + + ++ E + R +R + I +
Sbjct: 649 GKGLAP----DVFTYNILINGHCKEGNVKKALEIFENMSRR-GVRATVVTYTALIYALSK 703
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+ + F+E + G+R + NAL+ S N + I E K I P+
Sbjct: 704 KGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR-IAPDDV 762
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +++ C G ++ EM + I+P+ + L++G+ + +D ++ M
Sbjct: 763 TYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEM 822
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
G + YN IQ LCK + ++A+ ++ M+ GI P+ TY LI G E
Sbjct: 823 MNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 3/346 (0%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK 102
R A L+S+ + LD A D + + + LS+ ++L +
Sbjct: 165 RLVCAVLRSQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMT 224
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
R R E F + +V Y +A M+ +A++ M K G+ + N + +
Sbjct: 225 RRGIERSPEAFS-YVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKL 283
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
E+ R F E KV GIEP+ +YN +IK +C+ ++AEM K P+ +
Sbjct: 284 EKALR-FLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYT 342
Query: 223 LLAGFYKEHKYEDVGKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
++A K+ K E+V ++++ M++ + YN I +L K +++A L +
Sbjct: 343 VMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEK 402
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G + Y ++ F K N++ AK L M + GC PD + C+ G+ + A
Sbjct: 403 GFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEA 462
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
K+ + G P+ T L+ GL K EA E+I + ++ +
Sbjct: 463 KKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHW 508
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 1/309 (0%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D++++ ++ L + + +L+E + +L ++ + I + D A+
Sbjct: 334 PPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDAL 393
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
E ++ G +A++ +KN ++ K + + G P+ TY +I
Sbjct: 394 VFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYS-KGCNPDVVTYTAIIDG 452
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC G +L +M + +PN + +LL G K + +++ + E+
Sbjct: 453 FCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPN 512
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
Y+ + L + + EA L M+ +G PN LI + N+ GAKK
Sbjct: 513 AITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLE 572
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ GC + F Y CQ G+ + AL + P T +L L S
Sbjct: 573 ECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKS 632
Query: 372 KVAEANELI 380
++ EA+ELI
Sbjct: 633 RLDEASELI 641
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 140/322 (43%), Gaps = 16/322 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV----HSIVL--YGQANMI 127
D++ ++ + LS+ H + L E + + FH+ +S V+ + + I
Sbjct: 372 DQVTYNTLIYALSKHGHADDALVFLREAEEKG-------FHIDKVGYSAVVDSFCKNKNI 424
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A +M G V A++ G +E K++ + K +G +PN+ TY
Sbjct: 425 DKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYK-HGCKPNTVTYTV 483
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKC 246
++ C +G S ++ PNA + ++ G +E K + + +M+EK
Sbjct: 484 LLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKG 543
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + V++ N+ IQSLC+ + AK L+ L +G N+ + +I+GF + G+L+ A
Sbjct: 544 FLPNPVDI-NLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAA 602
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M PD+ + L + + A ++ + KG P T ++++
Sbjct: 603 LSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHR 662
Query: 367 LASISKVAEANELIGLMKKRFP 388
+V + +L+ M R P
Sbjct: 663 FCQWGRVDDMMKLLEKMIARQP 684
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P++ TY + + + ++ +M K I P + ++ F + + +D+ K+
Sbjct: 616 PDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKL 675
Query: 240 LQMMEKCGIASGV--NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
L+ M IA VYN I+ LC EEA+ LL +L K + T LI +
Sbjct: 676 LEKM----IARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESY 731
Query: 298 GKEGNLEGAKKLFASMTNGGCEPD 321
+GN A K+ M PD
Sbjct: 732 LIDGNALSAYKVACQMFRRNLIPD 755
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 151/322 (46%), Gaps = 10/322 (3%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
G + PE+ ++ ++ + F+ + ++L+ +K + + N+ + I L +
Sbjct: 233 GKGIKPEA----YTYNTIINAYLKHRDFSGVEKILKVMK-KDGVVYNKVTYTLLIELSVK 287
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPN 181
++ + F+EM + G+ + +L+ N +KR F F ++ G+ P+
Sbjct: 288 NGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGN---IKRAFLLFDELTEKGLLPS 344
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S TY +I C+ G+ + ++ EM+ K + F L+ G+ ++ ++ +
Sbjct: 345 SHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYD 404
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+MEK G + V N +LKR +EAK L M+ G++ + +Y +LI + KEG
Sbjct: 405 VMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEG 464
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
N+E AK+LF M++ +P++ + + Y C+ G+ + A K+ A G P T
Sbjct: 465 NVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYT 524
Query: 362 SLVTGLASISKVAEANELIGLM 383
SL+ G V EA L M
Sbjct: 525 SLIHGECIADNVDEAMRLFSEM 546
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 123/278 (44%), Gaps = 5/278 (1%)
Query: 111 ERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
E+F +Y M + ++ F+ M K GL S+D + ++ + +K +
Sbjct: 135 EKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGL--SIDERSCIVF-LVAAKKRRRIDLCLE 191
Query: 171 EFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
F ++ G++ + V++ C G+ ++ E K I+P A + ++ +
Sbjct: 192 FFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYL 251
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K + V K+L++M+K G+ Y + I+ K + + + L D M RGI+ ++
Sbjct: 252 KHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIH 311
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
Y LI ++GN++ A LF +T G P S+ + +C+ GE A +
Sbjct: 312 VYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEM 371
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+KG +L+ G + EA+ + +M+K+
Sbjct: 372 QSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKK 409
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 100/249 (40%), Gaps = 36/249 (14%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + MID A ++ M+K G + V N + K Y+E K+ + G+
Sbjct: 390 YCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG-GVRL 448
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ +Y +I +C+ G+ + EM K ++PNA
Sbjct: 449 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAI---------------------- 486
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
YN+ I + CK + +EA+ L M + G+ P+ TY LIHG
Sbjct: 487 -------------TYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIA 533
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
N++ A +LF+ M G + +S + + L + G+ + A + KG+
Sbjct: 534 DNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVY 593
Query: 361 KSLVTGLAS 369
+L+ + S
Sbjct: 594 TALIGSMHS 602
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 128/316 (40%), Gaps = 2/316 (0%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + + I V + +LL E+ R L N + I L + A
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR-GLELNPVAYTSVIALLCDEGQVSDA 339
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ E+M +G+ ++ G + + F E K G+ + TY +I
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK-RGLAADGVTYTALIN 398
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C +G+ +L EM K + +A + +L+ G+ K K + V M + +
Sbjct: 399 GLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y LCK A LL M S+G++ N+ TY LI+G K GNLE A +
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM 518
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G +PD Y + LCQ E + A + + + KG P T L+ G
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 371 SKVAEANELIGLMKKR 386
+V L+ M ++
Sbjct: 579 GRVEGGKRLLEWMLEK 594
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 14/310 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD F+ +S + A +E++ R L + + I +A + A +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAER 411
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG------IEPNSETYN 186
+EM+ GL VDA+ +L Y +V ++ TE V+ + PN TY
Sbjct: 412 VLQEMEDKGL--DVDAVTY----TVLIDGYCKVGKM-TEAFLVHNKMVQKRVTPNVVTYT 464
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ C+ GD + +L EM K + N + L+ G K E + + M++
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V Y I +LC+ K + A +LL ML +GIKP + TY L++GF G +EG
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+L M P++ + C ++ ++ + +++ VP+ +T L+ G
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Query: 367 LASISKVAEA 376
+ EA
Sbjct: 645 HCKARNMKEA 654
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+E N TYN +I C++G+ + +M ++P+ + ++ + + +
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+LQ M GI + YN+ + C R E K LL+ ML + I PN TY L+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ E N++ +++ M + P+ + + C+ + AL + KG+
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK-RFPKSGDMWN 395
S+ +L+ L K EA L M+K R D++N
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYN 709
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 87/225 (38%), Gaps = 40/225 (17%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q+ +D A +EM G++ ++ N L+ G +S E KR+ E+ I PN+
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL-EWMLEKNIHPNT 600
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++K +C + S I M + + PN
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNE------------------------- 635
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
N YNI I+ CK + +EA M+ +G + +Y LI K+
Sbjct: 636 ----------NTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKK 685
Query: 303 LEGAKKLFASMTNG--GCEPDSYCFFMFTYFLCQGGEYETALKVC 345
A++LF M EPD Y F++ F E+ L +C
Sbjct: 686 FTEARRLFEKMRKDRLTAEPDVYNFYIDLSF--NEDNLESTLALC 728
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 47/250 (18%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+ +YG+ S ++ NA+L C L +E ++F E P E N+ +YN ++K+ C +G
Sbjct: 217 LRQYGISPSPESCNAVL--CRLP--LDEAVQLFQELP-----EKNTCSYNILLKALCTAG 267
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ + EM P+ +G+++ G+
Sbjct: 268 RIKDAHQLFDEMASP---PDVVTYGIMVHGY----------------------------- 295
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
C L E A LL M +RG++ N Y +I EG + A ++ M
Sbjct: 296 ------CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G D+ F C+ G+ A +G T +L+ GL ++ EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 377 NELIGLMKKR 386
++ M+ +
Sbjct: 410 ERVLQEMEDK 419
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 4/312 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + +S L + I+ LL E++ R L N + + I + A+ +
Sbjct: 330 VTYGTLMSWLGRKGDLEKIASLLSEMRER-RLPPNVQIYNSVIDALCKCRSASQALVVLK 388
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M G + L+ G +E +R+ E + + + PN +Y +I FC
Sbjct: 389 QMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTR-WELNPNLSSYTSLIHGFCVR 447
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G+ ++L EM + P+ FG L+ G + + V + M + N+Y
Sbjct: 448 GEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIY 507
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N+ I LCK K A+ L++ ML + + P+ Y LI GF + +L+ A+K+F M
Sbjct: 508 NVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQ 567
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVA 374
G PD + CQ G A++ C ++M K G +P T +L+ G A ++
Sbjct: 568 KGIHPDVVGYNAMIKGYCQFGMMNEAVE-CMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS 626
Query: 375 EANELIGLMKKR 386
A L+ M KR
Sbjct: 627 GALSLLCDMMKR 638
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN+ YN +I +C GD +L EM K + P +G L++ ++ E +
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKI 348
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L M + + V +YN I +LCK + + +A +L M + G P+ T+ LI G
Sbjct: 349 ASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISG 408
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+EG ++ A++L T P+ + + C GE A + M +G P
Sbjct: 409 LCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPD 468
Query: 357 FSTMKSLVTGLASISKVAEA 376
T +L+ GL +V+EA
Sbjct: 469 VVTFGALIHGLVVAGQVSEA 488
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 131/306 (42%), Gaps = 8/306 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH---VHSIVLYGQANMIDHA 130
D + FS +S L Q +LL E TR +L N + +H + G+ + A
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRE-TTRWELNPNLSSYTSLIHGFCVRGEVIV---A 453
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
EM + G V AL+ G +++ E + E + P++ YN +I
Sbjct: 454 SNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL-LVREKMAARQLLPDANIYNVLIS 512
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ + +++ EM +++ P+ + L+ GF + ++ K+ + ME+ GI
Sbjct: 513 GLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHP 572
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN I+ C+ EA + M G P+ TY LI G+ K+GN+ GA L
Sbjct: 573 DVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M C+P+ + C+ G+ + A + + ++G P+ T L+ L
Sbjct: 633 CDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKK 692
Query: 371 SKVAEA 376
KV A
Sbjct: 693 DKVVRA 698
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+++++++ G + M+ A EEM + + L+ G I +++ +E ++IF E
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIF-E 563
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
F + GI P+ YN +IK +C+ G + ++ MR+ P+ + L+ G+ K+
Sbjct: 564 FMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQG 623
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+L M K V Y+ I CKL ++ A+ L M S+G+ PN+ TY
Sbjct: 624 NISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYT 683
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LI K+ + A F M C P+ Y LC
Sbjct: 684 ILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLC 725
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 25/326 (7%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERF--HVHSIVLYG--QANMIDH 129
D +++ +S L + A L+EE+ L QN +V++ ++ G + +D
Sbjct: 503 DANIYNVLISGLCKKKMLPAARNLIEEM-----LEQNVHPDKYVYTTLIDGFIRNESLDE 557
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + FE M++ G+ V NA++ G E + KV G P+ TY +I
Sbjct: 558 ARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV-GRIPDEFTYTTLI 616
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + G+ S S+L +M ++ +PN + L+ G+ K + + ME G+
Sbjct: 617 GGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLF 676
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF------------ 297
V Y I I SL K + A + ML PN T L+ G
Sbjct: 677 PNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHC 736
Query: 298 GKEGNLEGAKKL---FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
NL G L F ++ N C+P + + + LC AL + KG+
Sbjct: 737 SSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYK 796
Query: 355 PHFSTMKSLVTGLASISKVAEANELI 380
P +T SL+ G S+ K E ++
Sbjct: 797 PDSATFLSLLYGFCSVGKSREWRTIL 822
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 139/316 (43%), Gaps = 10/316 (3%)
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHV 115
LD+ +L SP D F+I ++ L + +L EE+K+ PD +
Sbjct: 380 LDLARQVTLKGLSP-DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD-EVTYNTLI 437
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
++ G+ + A+ +EM+ G +S N ++ G EE + +F + +
Sbjct: 438 DNLCSLGK---LGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM-DL 493
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI N+ T+N +I C+ ++++M + ++PN + +L + K+ +
Sbjct: 494 QGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKK 553
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+LQ M G V Y I LCK R++ A LL GM +G++ Y +I
Sbjct: 554 AADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQ 613
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWV 354
+ N A LF MT G PD++ + + LC+ GG A + KG++
Sbjct: 614 SLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFI 673
Query: 355 PHFSTMKSLVTGLASI 370
P FS+ + L GL ++
Sbjct: 674 PEFSSFRMLAEGLLNL 689
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 2/279 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++I V+ L + +L ++ R L F+ IV N ++ A+
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTL-IVALCSGNRLEEALDL 382
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++ GL V N L+ + + R+F E K G P+ TYN +I + C
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM-KSSGCTPDEVTYNTLIDNLC 441
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G +L EM + + ++ G K+ + E+ +V M+ GI+
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N I LCK KR ++A L+ M+S G++PN TY ++ + K+G+++ A + +M
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
T G E D + LC+ G + ALK+ R KG
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 123/258 (47%), Gaps = 2/258 (0%)
Query: 123 QANMIDHAMQTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
Q +D ++D +G++ N LL + + ++ +++E + GI+P+
Sbjct: 126 QQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGE-RGIKPD 184
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
T+N ++K+ C + + +L EM + P+ T F L+ GF +E + +V
Sbjct: 185 VVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKA 244
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + G + N+ I CKL R E+A + ++ G +P+ TY ++G + G
Sbjct: 245 RMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNG 304
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ A K+ M G +PD + + + LC+ G+ E A + + +G +P +T
Sbjct: 305 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFN 364
Query: 362 SLVTGLASISKVAEANEL 379
+L+ L S +++ EA +L
Sbjct: 365 TLIVALCSGNRLEEALDL 382
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 2/277 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ + A+ EEM G+ L+ G + + + R+ ++ G P
Sbjct: 197 RAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM-GCSPTK 255
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T N +I +C+ G + + P+ + + G + KV+ +
Sbjct: 256 VTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDV 315
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G V YNI + LCK + EEAK +L+ M+ RG P++ T+ LI
Sbjct: 316 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNR 375
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
LE A L +T G PD Y F + LC+ G+ + AL++ + G P T +
Sbjct: 376 LEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNT 435
Query: 363 LVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
L+ L S+ K+ +A +L+ M+ P+S +N +
Sbjct: 436 LIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTII 472
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 133/314 (42%), Gaps = 8/314 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D++ ++ V+ L Q H ++++ + PD+ V+ + GQ ++ A
Sbjct: 289 DQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVF-TYNIVVNCLCKNGQ---LEEA 344
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+M + G + N L++ EE + + + G+ P+ T+N +I
Sbjct: 345 KGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQV-TLKGLSPDVYTFNILIN 403
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C+ GD + EM+ P+ + L+ K +L+ ME G
Sbjct: 404 ALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPR 463
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN I LCK R EEA+ + D M +GI N T+ LI G K+ ++ A +L
Sbjct: 464 STVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLI 523
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M + G +P++ + C+ G+ + A + + A G+ T +L+ GL
Sbjct: 524 SQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKA 583
Query: 371 SKVAEANELIGLMK 384
+ A +L+ M+
Sbjct: 584 GRTQVALKLLRGMR 597
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 135/311 (43%), Gaps = 4/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L +A+ +LEE+ + + +E + + + I A++
Sbjct: 184 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSS-GVAPDETTFTTLMQGFVEEGSIKAALRV 242
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M + G + +N L+ G C L + + + I E G EP+ TYN +
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIAN--GFEPDQITYNTFVNGL 300
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++G ++ M ++ P+ + +++ K + E+ +L M + G +
Sbjct: 301 CQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDI 360
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I +LC R EEA L + +G+ P++ T+ LI+ K G+ + A +LF
Sbjct: 361 TTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEE 420
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + GC PD + LC G+ AL + + + G T +++ GL +
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMR 480
Query: 373 VAEANELIGLM 383
+ EA E+ M
Sbjct: 481 IEEAEEVFDQM 491
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+ V + + ++GI+ ++ YN ++ E + ++ +EM + I+P+ F
Sbjct: 131 DAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNT 190
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ + H+ +L+ M G+A + +Q + + A + ML G
Sbjct: 191 LMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMG 250
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
P T LI+G+ K G +E A G EPD + F LCQ G AL
Sbjct: 251 CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KV + +G P T +V L ++ EA ++ M +R
Sbjct: 311 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVER 354
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 50/348 (14%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH---VHSIVLYGQANMIDHAMQ 132
+A + + +L + + +L + R L NE + +HS+ G M++ A+
Sbjct: 52 LACNAWIDRLGKDGRYREAEKLFRGMADR-GLDPNEVTYAILIHSLCKRG---MMEDALC 107
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+ M + G+R +V N+L+ G N+ + + + E G+ P+ +Y+ +I
Sbjct: 108 MFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEM-VAKGLTPSPASYSPLIAGL 166
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C GD +S + EM R ++ N F L++GF K+ ++ ++ M + +
Sbjct: 167 CRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNE 226
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI------------------ 294
+N+ I+ C++ +A L D ML RG+ P+ TY+ LI
Sbjct: 227 VTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVAD 286
Query: 295 -----------------HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
HGF KEG+ A+ L M G P+SY + F +L GE
Sbjct: 287 LENNCAVLNSFSLTALMHGFCKEGS---AEILCKEMLAGHFLPNSYTYNCFLDYLANEGE 343
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
E A KV A+M +G + + T +L+ G ++ A I LM+K
Sbjct: 344 LEKA-KVLHAAMLEGCLANTVTFNTLIKGFCMAGQIQGA---IDLMQK 387
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 1/243 (0%)
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K G+ ++ A NA + Y E +++F G++PN TY +I S C+ G
Sbjct: 44 KLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMAD-RGLDPNEVTYAILIHSLCKRGMM 102
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ MR K IR + L+ G+ K + + +L M G+ Y+
Sbjct: 103 EDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPL 162
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I LC+ A L M + N+ T+ LI GF K+GN++ A +LF M
Sbjct: 163 IAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSL 222
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
P+ F + C+ G A ++ + +G P T +SL++ + +A E
Sbjct: 223 VPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKE 282
Query: 379 LIG 381
+
Sbjct: 283 FVA 285
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI N N I + G + M + + PN + +L+ K ED
Sbjct: 46 GIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDA 105
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M + GI V YN I CK +A+ LL+ M+++G+ P+ +Y LI G
Sbjct: 106 LCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAG 165
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++G+L A +L MT + Y F C+ G + A ++ M VP+
Sbjct: 166 LCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPN 225
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T ++ G + + +A +L M R
Sbjct: 226 EVTFNVMIEGYCRVGNIRKAFQLYDQMLDR 255
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 101/270 (37%), Gaps = 40/270 (14%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM+ EM + + +V AL+ G N +E R+F + + + PN T+N +I
Sbjct: 175 AMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMES-SLVPNEVTFNVMI 233
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRP---------------------------------- 215
+ +C G+ + + +M + + P
Sbjct: 234 EGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAV 293
Query: 216 -NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
N+ L+ GF KE E + K +M+ + + YN + L E+AK L
Sbjct: 294 LNSFSLTALMHGFCKEGSAEILCK--EMLAGHFLPNSY-TYNCFLDYLANEGELEKAKVL 350
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
ML G N T+ LI GF G ++GA L T G PD + LC+
Sbjct: 351 HAAML-EGCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCK 409
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLV 364
G+ A ++ + KG P L+
Sbjct: 410 VGDTNKAFELWNEMLYKGLKPDIVAYTILI 439
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PNS TYN + G+ + A M + N F L+ GF + + +
Sbjct: 326 PNSYTYNCFLDYLANEGELEKAKVLHAAMLEGCL-ANTVTFNTLIKGFCMAGQIQGAIDL 384
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+Q + G Y+ I LCK+ + +A L + ML +G+KP++ Y LI
Sbjct: 385 MQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGLKPDIVAYTILIRWCNI 444
Query: 300 EGNLEGAKKLFASMT 314
G + +++ M
Sbjct: 445 HGEFDKGLGIYSDMV 459
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 128/316 (40%), Gaps = 2/316 (0%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + + I V + +LL E+ R L N + I L + A
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR-GLELNPVAYTSVIALLCDEGQVSDA 339
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ E+M +G+ ++ G + + F E K G+ + TY +I
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK-RGLAADGVTYTALIN 398
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C +G+ +L EM K + +A + +L+ G+ K K + V M + +
Sbjct: 399 GLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y LCK A LL M S+G++ N+ TY LI+G K GNLE A +
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM 518
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G +PD Y + LCQ E + A + + + KG P T L+ G
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 371 SKVAEANELIGLMKKR 386
+V L+ M ++
Sbjct: 579 GRVEGGKRLLEWMLEK 594
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 14/310 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD F+ +S + A +E++ R L + + I +A + A +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAER 411
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG------IEPNSETYN 186
+EM+ GL VDA+ +L Y +V ++ TE V+ + PN TY
Sbjct: 412 VLQEMEDKGL--DVDAVTY----TVLIDGYCKVGKM-TEAFLVHNKMVQKRVTPNVVTYT 464
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ C+ GD + +L EM K + N + L+ G K E + + M++
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V Y I +LC+ K + A +LL ML +GIKP + TY L++GF G +EG
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+L M P++ + C ++ ++ + +++ VP+ +T L+ G
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Query: 367 LASISKVAEA 376
+ EA
Sbjct: 645 HCKARNMKEA 654
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+E N TYN +I C++G+ + +M ++P+ + ++ + + +
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+LQ M GI + YN+ + C R E K LL+ ML + I PN TY L+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ E N++ +++ M + P+ + + C+ + AL + KG+
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK-RFPKSGDMWN 395
S+ +L+ L K EA L M+K R D++N
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q+ +D A +EM G++ ++ N L+ G +S E KR+ E+ I PN+
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL-EWMLEKNIHPNT 600
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++K +C + S I M + + PN + +L+ G K ++
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G + YN I+ L K K+ EA+ L + M + D Y I E N
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDN 720
Query: 303 LEGAKKL 309
LE L
Sbjct: 721 LESTLAL 727
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 96/250 (38%), Gaps = 47/250 (18%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+ +YG+ S ++ NA+L C L +E ++F E P E N+ +YN ++K+ C +G
Sbjct: 217 LRQYGISPSPESCNAVL--CRLP--LDEAVQLFQELP-----EKNTCSYNILLKALCTAG 267
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ + EM P+ +G+++ G+
Sbjct: 268 RIKDAHQLFDEMASP---PDVVTYGIMVHGY----------------------------- 295
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
C L E A LL M +RG++ N Y +I EG + A ++ M
Sbjct: 296 ------CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G D+ F C+ G+ A +G T +L+ GL ++ EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409
Query: 377 NELIGLMKKR 386
++ M+ +
Sbjct: 410 ERVLQEMEDK 419
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 10/304 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL-KTRPDLRQ------NERFHVHSIVLYGQANM 126
D ++++ + L A + + +L++E+ K L Q +++ ++ G
Sbjct: 220 DIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKE 279
Query: 127 IDH--AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
H A + M YGL+ +V N +L G + +E+ + + TE + + T
Sbjct: 280 GHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQ-KNCPLDDVT 338
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N ++ FC++G V +L +M P+ + ++ GF KE ++ +L+ M
Sbjct: 339 FNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMP 398
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
CG Y I ++ LC +R +A+ L+ M+ +G PN T+ +I+ K+G +E
Sbjct: 399 SCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVE 458
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +L M GC PD + L + G+ E AL++ + KG P+ T S+
Sbjct: 459 QAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMA 518
Query: 365 TGLA 368
LA
Sbjct: 519 FALA 522
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 1/252 (0%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +M ++G + ++ G ++E I + P YG++PN YN V+K
Sbjct: 252 EALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPS-YGLKPNVVCYNTVLKG 310
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C + +L EM +K+ + F +L+ F + + V ++L+ M + G
Sbjct: 311 ICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPD 370
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y I CK +EA LL M S G KPN +Y ++ G A++L +
Sbjct: 371 VITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMS 430
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M GC P+ F FLC+ G E A+++ + + G P + +++ GL
Sbjct: 431 RMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAG 490
Query: 372 KVAEANELIGLM 383
K EA EL+ +M
Sbjct: 491 KTEEALELLNVM 502
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 142/311 (45%), Gaps = 2/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + + A+ + +LL E+ + + F++ + + Q ++D ++ E
Sbjct: 302 VCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNIL-VDFFCQNGLVDRVIELLE 360
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M ++G V ++ G +E + P G +PN+ +Y V+K C +
Sbjct: 361 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSC-GCKPNTISYTIVLKGLCST 419
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+++ M ++ PN F ++ K+ E ++L+ M G + Y
Sbjct: 420 ERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISY 479
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K ++EEA LL+ M+++GI PN+ TY + +EG ++ ++F ++ +
Sbjct: 480 STVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQD 539
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ E + A+ ++ G +P+ ST +L+ GLAS + E
Sbjct: 540 ATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCE 599
Query: 376 ANELIGLMKKR 386
A +L+ + R
Sbjct: 600 AQDLLSELCSR 610
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 16/242 (6%)
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES---GDSSS-------VYSI 204
GC+ +E + + P ++G E + +YN V+K C + GD V+
Sbjct: 200 GCV-----DEGLEMLRKLP-LFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEA 253
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L++M + P+ + ++ G KE +E ++L M G+ V YN ++ +C
Sbjct: 254 LSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICS 313
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
R E+A+ LL M + + T+ L+ F + G ++ +L M GC PD
Sbjct: 314 ADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 373
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ C+ G + A+ + + + G P+ + ++ GL S + +A EL+ M
Sbjct: 374 YTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI 433
Query: 385 KR 386
++
Sbjct: 434 QQ 435
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 107/260 (41%), Gaps = 14/260 (5%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+D G V NA++ G E +R+ P + PN+ TY V++ C G
Sbjct: 75 LDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP----VPPNAYTYFPVVRGLCGRG 130
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ ++L EM +S P + +++ + Y +VL+ + G N
Sbjct: 131 RIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCN 190
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG---KEGNLE-------GA 306
+ I ++C +E +L + G + ++ +Y ++ G + G++E
Sbjct: 191 LVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKV 250
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + M GC PD + +C+ G +E A ++ + G P+ +++ G
Sbjct: 251 HEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKG 310
Query: 367 LASISKVAEANELIGLMKKR 386
+ S + +A EL+ M ++
Sbjct: 311 ICSADRWEKAEELLTEMYQK 330
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++ ++ G A+GV YN + C++ + E A+ L + + PN TY ++ G
Sbjct: 72 VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV---PVPPNAYTYFPVVRGLCG 128
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
G + A + MT+ C P + + C+ G Y +AL+V A AKG
Sbjct: 129 RGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKG 181
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 6/198 (3%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+S C +G ++ L + D+ ++AG+ + + E ++ +
Sbjct: 58 LIRSLCVAGRTADAVRALDAAGNAA---GVVDYNAMVAGYCRVGQVEAARRLAAAVP--- 111
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y ++ LC R +A A+LD M SR P Y +I + G A
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSAL 171
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++ ++ G D+ + +C G + L++ R G + +++ GL
Sbjct: 172 RVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGL 231
Query: 368 ASISKVAEANELIGLMKK 385
+ + + EL+ M K
Sbjct: 232 CAAKRWGDVEELMDEMVK 249
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+++ A+ F M G+ + +L+ G ++E + E + I P+ T+
Sbjct: 248 LVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL-NIMPDIVTF 306
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ +FC+ G S +L M + PN + L+ G+ + K+ +M
Sbjct: 307 NVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMIT 366
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + YNI I CK KR +EA L + M+ +G+ PN +Y LIHGF + G L
Sbjct: 367 KGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLRE 426
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A+ LF +M G PD + + + C+ G A ++ RA + P+ LV
Sbjct: 427 AQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVH 486
Query: 366 GLASISKVAEANEL 379
+ +A +L
Sbjct: 487 AMCKSGNHKDARKL 500
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 5/265 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q +D ++ K GL+ ++ L+ G + + +F + G +P
Sbjct: 138 FCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDM-VAKGCQP 196
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I C+ G++++ +L +M +PN + L+ ++ + +
Sbjct: 197 DVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIF 256
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ GI+ + Y IQ LCK R +EA ALL+ M S I P++ T+ L+ F KE
Sbjct: 257 SYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKE 316
Query: 301 GNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
G + A + +MT G EP+ +Y M+ Y L + A K+ + KG P+
Sbjct: 317 GKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSL--WTDVVEARKLFHVMITKGCKPNIF 374
Query: 359 TMKSLVTGLASISKVAEANELIGLM 383
+ L+ G ++ EA +L M
Sbjct: 375 SYNILINGYCKAKRIDEAMQLFNEM 399
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 117/251 (46%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ F++M G + V N ++ G + + + G +PN TY+ +
Sbjct: 181 QAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA-GCQPNMVTYSTL 239
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I S C + I + M+ K I P+ + L+ G K ++++ +L M I
Sbjct: 240 IDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNI 299
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ +N+ + + CK + EA +L M G++PN+ TY L++G+ ++ A+K
Sbjct: 300 MPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARK 359
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M GC+P+ + + + C+ + A+++ + +G P+ + +L+ G
Sbjct: 360 LFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFC 419
Query: 369 SISKVAEANEL 379
+ K+ EA +L
Sbjct: 420 QLGKLREAQDL 430
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 130/283 (45%), Gaps = 6/283 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAM 131
D + F++ V + +S+ L LKT ++ +S ++YG + D A
Sbjct: 302 DIVTFNVLVDTFCKEGK---VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEAR 358
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F M G + ++ + N L+ G +K +E ++F E G+ PN+ +YN +I
Sbjct: 359 KLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIH-QGLTPNNVSYNTLIHG 417
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ G + M P+ + +LL GF K+ ++ + M+ +
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 477
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ +Y I + ++CK ++A+ L + +G++P++ Y +I+G KEG L+ A + F
Sbjct: 478 LVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFR 537
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+M GC PD + + L Q + AL + +G++
Sbjct: 538 NMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 3/316 (0%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D ++ + L + + + S LL E+ + + F+V + + + + A
Sbjct: 265 SP-DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNV-LVDTFCKEGKVSEA 322
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + M + G+ +V ++L+ G L + E +++F G +PN +YN +I
Sbjct: 323 LGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLF-HVMITKGCKPNIFSYNILIN 381
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C++ + EM + + PN + L+ GF + K + + + M G
Sbjct: 382 GYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLP 441
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ Y+I + CK +A L M S +KPNL Y L+H K GN + A+KLF
Sbjct: 442 DLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLF 501
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ + G +P + LC+ G + AL+ R A G P + ++ GL
Sbjct: 502 SELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQH 561
Query: 371 SKVAEANELIGLMKKR 386
+ A L+G M+ R
Sbjct: 562 KDESRALLLVGEMRDR 577
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 142/319 (44%), Gaps = 12/319 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ F+ ++ L + F +L +++ + PD+ + ++ ++ G + + A
Sbjct: 164 VTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDV------YTYNTIINGLCKIGETAAA 217
Query: 133 T--FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++M++ G + ++ + L+ + E IF+ + K GI P+ TY +I+
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFS-YMKAKGISPDIFTYTSLIQ 276
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ ++L EM +I P+ F +L+ F KE K + VL+ M + G+
Sbjct: 277 GLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEP 336
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y+ + EA+ L M+++G KPN+ +Y LI+G+ K ++ A +LF
Sbjct: 337 NVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLF 396
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G P++ + + CQ G+ A + R G +P T L+ G
Sbjct: 397 NEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQ 456
Query: 371 SKVAEANELIGLMKKRFPK 389
+ +A L M+ + K
Sbjct: 457 GYLGKAFRLFRAMQSTYLK 475
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 108/258 (41%), Gaps = 3/258 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ +F M + LL + Y +V ++ ++ G+ PN T +
Sbjct: 73 IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ FC+ +S+LA++ + ++P F L+ G K ++ ++ M
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN I LCK+ + A LL M G +PN+ TY LI ++ + A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+F+ M G PD + + LC+ ++ A + + +P T LV
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312
Query: 367 LASISKVAEANELIGLMK 384
KV+EA +G++K
Sbjct: 313 FCKEGKVSEA---LGVLK 327
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 2/180 (1%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQSLCKLK 266
+ RK + P F LL+ K +Y DV L + ME G++ + +I + C+L+
Sbjct: 84 LHRKPL-PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQ 142
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R + ++L ++ G++P + T+ LI+G K G A +LF M GC+PD Y +
Sbjct: 143 RVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYN 202
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ GE A + + G P+ T +L+ L V EA ++ MK +
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK 262
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ F M G+ + N+L+ G ++E + E + I P+ T+N
Sbjct: 254 VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM-RSLNIMPDIVTFN 312
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + C+ G S +L M + P+ + L+ G+ + + K+ M
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YNI I CK+KR +EAK L + M+ +G+ PN +Y LIHG + G+L A
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ LF +M G P+ + + + C+ G + A ++ RA + P+ L+
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492
Query: 367 LASISKVAEANEL 379
+ + +A +L
Sbjct: 493 MCKSGNLRDARKL 505
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 5/259 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A ++ K GL+ ++ L+ + + +F + G P+ TY
Sbjct: 149 VDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMV-ARGCRPDVYTYT 207
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G++++ +L +M +PN + ++ K+ + + + M+
Sbjct: 208 TIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVK 267
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI+ + YN IQ LC + +EA ALL+ M S I P++ T+ L+ KEG + A
Sbjct: 268 GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEA 327
Query: 307 KKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+ + +MT G EPD +Y M+ Y L E A K+ A + KG P + L+
Sbjct: 328 QGVLKTMTEMGVEPDVVTYSSLMYGYSL--RSEVVEARKLFDAMITKGCKPDVFSYNILI 385
Query: 365 TGLASISKVAEANELIGLM 383
G + ++ EA +L M
Sbjct: 386 NGYCKVKRIDEAKQLFNEM 404
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 145/319 (45%), Gaps = 12/319 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ F+ ++ L + F +L +++ R PD+ + ++ ++ G + + A
Sbjct: 169 VTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDV------YTYTTIINGLCKIGETAAA 222
Query: 133 T--FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++M++ G + +V + ++ + E IF+ + KV GI P+ TYN +I+
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFS-YMKVKGISPDIFTYNSLIQ 281
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C ++L EMR +I P+ F +L+ KE K + VL+ M + G+
Sbjct: 282 GLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y+ + EA+ L D M+++G KP++ +Y LI+G+ K ++ AK+LF
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLF 401
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G P++ + + LCQ G A + + G +P+ T L+ G
Sbjct: 402 NEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQ 461
Query: 371 SKVAEANELIGLMKKRFPK 389
+A L M+ + K
Sbjct: 462 GYFGKAFRLFRAMQSTYSK 480
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 12/291 (4%)
Query: 74 DRMAFSIAVSKL---SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA--NMID 128
D + F++ V + + + + + + E+ PD+ +S ++YG + + +
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVV------TYSSLMYGYSLRSEVV 360
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F+ M G + V + N L+ G K +E K++F E G+ PN+ +YN +
Sbjct: 361 EARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIH-QGLTPNNVSYNTL 419
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+ G ++ M PN + +LL GF K+ + ++ + M+
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ +YNI I ++CK +A+ L + +G++PN Y +I+G KEG L+ A +
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
F +M GC PD + + + A+++ KG++ T
Sbjct: 540 AFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 137/331 (41%), Gaps = 9/331 (2%)
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHV 115
LDI + SP D ++ + L + + S LL E+++ PD+ V
Sbjct: 258 LDIFSYMKVKGISP-DIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVL-V 315
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
+I G+ + ++T EM G+ V ++L+ G L E +++F
Sbjct: 316 DTICKEGKVSEAQGVLKTMTEM---GVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMI-T 371
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G +P+ +YN +I +C+ + EM + + PN + L+ G + +
Sbjct: 372 KGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLRE 431
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ + M G + Y+I + CK +A L M S KPNL Y LI
Sbjct: 432 ARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILID 491
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K GNL A+KLF+ + G +P++ + LC+ G + AL+ R G P
Sbjct: 492 AMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 551
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ ++ G + A +LIG M+ +
Sbjct: 552 DEISYNVIIRGFLHHKDESRAVQLIGEMRDK 582
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 104/259 (40%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ +F M + LL + Y + T+ ++ G+ PN T +
Sbjct: 78 IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLS 137
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I F +S+LA++ + ++P F L+ K K+ ++ M
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V Y I LCK+ + A LL M G +PN+ TY +I K+ + A
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+F+ M G PD + + LC +++ A + + +P T LV
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317
Query: 367 LASISKVAEANELIGLMKK 385
+ KV+EA ++ M +
Sbjct: 318 ICKEGKVSEAQGVLKTMTE 336
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 3/269 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + I A++ M + G++ ++ + ++ G + K++ +F + K G
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVK-EG 549
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I +FC G+ + EM++ RP F ++ G+ K
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V MM +CG V+ +N I L + ++ E+A +LD M G+ N TY ++ G+
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A + F + N G + D + + C+ G ++AL V + A+ +P
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN-IPRN 728
Query: 358 STMKS-LVTGLASISKVAEANELIGLMKK 385
S + + L+ G A V EA +LI MKK
Sbjct: 729 SFVYNILIDGWARRGDVWEAADLIQQMKK 757
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 149/385 (38%), Gaps = 53/385 (13%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
+LK +N F + + + P D + ++ +S + + Q ++E++
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKP----DVILYNNIISAFCGMGNMDRAIQTVKEMQ---K 582
Query: 107 LRQNERFHVHSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
LR +++G A D +++ F+ M + G +V N L+ G + + E+
Sbjct: 583 LRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSF-------------------------------- 192
I E + G+ N TY K+++ +
Sbjct: 643 AVEILDEM-TLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 193 ---CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+SG S ++ EM ++I N+ + +L+ G+ + + ++Q M+K G+
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
++ Y I + K A ++ M + G+KPN+ TY LI G+ + E A
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 310 FASMTNGGCEPDSYCFF-MFTYFLCQGG-----EYETALKVCRASMAKGWVPHFSTMKSL 363
+ M G +PD + + T L + Y + +C+ + G + T
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHW 881
Query: 364 VTGLASISKVAEANELIGLMKKRFP 388
L I A EL ++K FP
Sbjct: 882 SKCLCKIE--ASGGELTETLQKTFP 904
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 127/303 (41%), Gaps = 2/303 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S+ V S+A H A +E K R N + I + Q ++ A
Sbjct: 380 VTYSVIVGGFSKAGHAEAADYWFDEAK-RIHKTLNASIYGKIIYAHCQTCNMERAEALVR 438
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ + + ++ G + + ++ +F K G P TY +I + +
Sbjct: 439 EMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRL-KECGFTPTVVTYGCLINLYTKV 497
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + M+ + ++ N + +++ GF K + + V + M K G+ V +Y
Sbjct: 498 GKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILY 557
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I + C + + A + M +P T+ +IHG+ K G++ + ++F M
Sbjct: 558 NNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR 617
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + F L + + E A+++ G + T ++ G AS+ +
Sbjct: 618 CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGK 677
Query: 376 ANE 378
A E
Sbjct: 678 AFE 680
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 132/327 (40%), Gaps = 47/327 (14%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEMDK 139
V K+S+A +S++++E + +L+ +S+++ G + D +A FE+M K
Sbjct: 497 VGKISKALE---VSRVMKEEGVKHNLK------TYSMMINGFVKLKDWANAFAVFEDMVK 547
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G++ V N ++ N + + E K+ P + T+ +I + +SGD
Sbjct: 548 EGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH-RPTTRTFMPIIHGYAKSGDMR 606
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS--------- 250
+ MRR P F L+ G ++ + E ++L M G+++
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 251 ----------------------GVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G++V Y +++ CK R + A A+ M +R I
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP 726
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
N Y LI G+ + G++ A L M G +PD + + F + G+ A +
Sbjct: 727 RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 786
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASIS 371
A G P+ T +L+ G A S
Sbjct: 787 IEEMEALGVKPNIKTYTTLIKGWARAS 813
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 133/344 (38%), Gaps = 37/344 (10%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R F + V + + + E ++ R + R + I Y +D A+
Sbjct: 309 RTEFGLMVKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMDEALSCV 367
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + G+ S+ + ++ G + + E F E +++ N+ Y K+I + C+
Sbjct: 368 RKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAHCQ 426
Query: 195 SGDSSSVYSILAEMRRKSI-----------------------------------RPNATD 219
+ + +++ EM + I P
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+G L+ + K K +V ++M++ G+ + Y++ I KLK A A+ + M+
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
G+KP++ Y ++I F GN++ A + M P + F + + G+
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+L+V G VP T L+ GL ++ +A E++ M
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 57/139 (41%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+P+ T+FGL++ + + + + M GI +Y I + + +EA +
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+ M GI+ +L TY ++ GF K G+ E A F ++ + Y C
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 334 QGGEYETALKVCRASMAKG 352
Q E A + R +G
Sbjct: 426 QTCNMERAEALVREMEEEG 444
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 177/399 (44%), Gaps = 23/399 (5%)
Query: 13 LKTVNYRNLATSSLLSAGDEAAALTIKEKKR-------ATIARLKSESNPFRILDICCGA 65
+ + Y N + EA ++ +K+ + I +K E++P R L+I
Sbjct: 24 ISPLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRV 83
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
+ + ++ + KL+++ F AI +L ++ T + +E ++ + + + +
Sbjct: 84 AEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQM-TYETCKFHEGIFLNLMKHFSKLS 142
Query: 126 MIDHAMQTFEEM-----DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + ++ F+ + +K L+ LN L + S + ++ K +EP
Sbjct: 143 LHERVVEMFDAIRPIVREKPSLKAISTCLNLL----VESNQVDLTRKFLLNSKKSLNLEP 198
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR-PNATDFGLLLAGFYKEHKYEDVGKV 239
N+ +N ++K C++GD S + ++ EM++ + PN + L+ G + ++ ++
Sbjct: 199 NTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIEL 258
Query: 240 L-QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+M+ K I YN I C ++ + A +++ M G PN+ Y L++GF
Sbjct: 259 FEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFC 318
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KEG LE AK++F M + G +PD+ + F C+ G + A+++ +
Sbjct: 319 KEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTV 378
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAA 397
T ++ GL + EA ++ +R P G N A
Sbjct: 379 TFNVILGGLCREGRFEEARGML----ERLPYEGVYLNKA 413
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 2/320 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A S ++ L ++N + + L K +L N + + + ID A + EE
Sbjct: 166 AISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEE 225
Query: 137 MDKYGLR-QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M K + ++ + L+ G S +E +F E I P++ TYN +I FC
Sbjct: 226 MKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHG 285
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
I+ M++ PN ++ L+ GF KE + E+ +V M+ G+ Y
Sbjct: 286 EKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGY 345
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I C+ R +EA LL M + + T+ ++ G +EG E A+ + +
Sbjct: 346 TTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPY 405
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G + + + LC+ GE + A ++ + +G +PHF+T L+ L KV +
Sbjct: 406 EGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGD 465
Query: 376 A-NELIGLMKKRFPKSGDMW 394
A L+GL++ F + W
Sbjct: 466 AVMALLGLLELGFKPEPNSW 485
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 1/259 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S ++ L + +L EE+ ++ + + + I + +D A++ E
Sbjct: 237 ITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIME 296
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M K G +V +AL+ G EE K +F E K G++P++ Y +I FC +
Sbjct: 297 FMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM-KSLGLKPDTVGYTTLINFFCRA 355
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +L +MR R + F ++L G +E ++E+ +L+ + G+ Y
Sbjct: 356 GRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASY 415
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + SLC+ ++A L+ ML RG+ P+ T L+ + G + A +
Sbjct: 416 RIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLE 475
Query: 316 GGCEPDSYCFFMFTYFLCQ 334
G +P+ + + +C+
Sbjct: 476 LGFKPEPNSWALLVELICR 494
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 1/162 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + +A +D AM+ ++M + R N +L G +EE + + P G
Sbjct: 349 INFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLP-YEG 407
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ N +Y V+ S C G+ ++ M + + P+ LL + K D
Sbjct: 408 VYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAV 467
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
L + + G N + + ++ +C+ ++ A LLD ++
Sbjct: 468 MALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 136/335 (40%), Gaps = 37/335 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+F + L + F + L+E ++ R L + F + + Y +A + A++TFE+
Sbjct: 163 SFHNLIEALGKIKQFRLVWSLVEAMRCR-GLLSKDTFRL-IVRRYARARKVKEAVETFEK 220
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK---------------------- 174
M +GL+ + N L+ SK ++ IF E +
Sbjct: 221 MSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEK 280
Query: 175 -------VY------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
VY GI+P+ Y +I SFC+SG + EM P+ +
Sbjct: 281 DLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYC 340
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ G E + ++ K ++ + G V N + + C+ + + A ++D M
Sbjct: 341 MLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKT 400
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI PN TY ++ K +E A +F M GCEP + M C + A
Sbjct: 401 GIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMA 460
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LKV + KG +P SL+ GL +++ EA
Sbjct: 461 LKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEA 495
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 95/231 (41%), Gaps = 8/231 (3%)
Query: 118 IVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+V YG ++ D A++ F EM+ G S L+ G + +E + F
Sbjct: 301 VVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYF- 359
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
E K G T N V+ ++C S + ++ EMR+ I PNA + ++L K
Sbjct: 360 ELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKS 419
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K E+ V Q M G +N Y + + C +R + A + M +G+ P + +
Sbjct: 420 QKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMF 479
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
LI+G E LE A F M + G P F L +GG A
Sbjct: 480 SSLINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLA 530
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +S V + N +S+LL E+++ +L ++V + Y + I AM
Sbjct: 276 DINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVL-LEAYAELGSIKEAMDV 334
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M G + + LL Y++V+ IF E KV +P++ TYN +I+ F
Sbjct: 335 FRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEM-KVSNTDPDAGTYNILIQVFG 393
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
E G V ++ +M +++ PN + L+ K YED K+L M + GI
Sbjct: 394 EGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSK 453
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I++ + EEA + + M G P ++TY IH F + G + A+ + + M
Sbjct: 454 AYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRM 513
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
G + D + F QGG+YE A+K
Sbjct: 514 NESGLKRDVHSFNGVIKAFRQGGQYEEAVK 543
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 2/263 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
F++ + +Q + +L + ++ + + NE + I L G+ ++D + F+EM
Sbjct: 103 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEM 162
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG- 196
G+ ++V A++ + + + K + P+ TYN VI + G
Sbjct: 163 PSNGVARTVYVYTAVINAYGRNGQFHASLELLNGM-KQERVSPSILTYNTVINACARGGL 221
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D + + AEMR + I+P+ + LL ++ V + M + GI +N Y+
Sbjct: 222 DWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYS 281
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+Q+ KL R E+ LL M S G P++ +Y L+ + + G+++ A +F M
Sbjct: 282 YLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAA 341
Query: 317 GCEPDSYCFFMFTYFLCQGGEYE 339
GC ++ + + + G Y+
Sbjct: 342 GCVANAATYSVLLNLYGKHGRYD 364
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 105/258 (40%), Gaps = 1/258 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A F M++ G+ ++ + L+ E+V + E + G P+ +YN
Sbjct: 259 DEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREM-ESGGNLPDITSYNV 317
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++++ E G + +M+ NA + +LL + K +Y+DV + M+
Sbjct: 318 LLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSN 377
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
YNI IQ + +E L M+ ++PN++TY+ LI GK G E AK
Sbjct: 378 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAK 437
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
K+ M G P S + Q YE AL V G P T S +
Sbjct: 438 KILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAF 497
Query: 368 ASISKVAEANELIGLMKK 385
A EA ++ M +
Sbjct: 498 ARGGLYKEAEAILSRMNE 515
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 110/266 (41%), Gaps = 3/266 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +GQA + + A+ F M++ G +V+ N+ + Y+E + I + + G
Sbjct: 459 IEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNES-G 517
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++ + ++N VIK+F + G EM + + PN ++L+ + ++
Sbjct: 518 LKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESE 577
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG- 296
+ Q ++ GI V Y + + K R +A L+D M++ + +I G
Sbjct: 578 EQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGD 637
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F E N + + +F + + GC + L + E A +V + +G P
Sbjct: 638 FDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWWMFQRERAARVLNEASKRGLFPE 697
Query: 357 FSTMKSLVTGLASISKVAEANELIGL 382
LV + + +++E L L
Sbjct: 698 LFRKSKLVWSV-DVHRMSEGGALTAL 722
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 6/315 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + +++ V+ + Q + +E LK P ++IVL G A + A
Sbjct: 229 DIVTYNVVVNGICQEGR---VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 285
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM + G +V N L+ E + + PK YG PNS +YN ++ +
Sbjct: 286 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK-YGCSPNSLSYNPLLHA 344
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ + L M + P+ + LL + + + ++L ++ G A
Sbjct: 345 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 404
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I L K +++EA LL+ M+S+G++P++ TY + G +E +E A + F
Sbjct: 405 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 464
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G P++ + LC+ E +A+ + + G +P+ ST L+ GLA
Sbjct: 465 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 524
Query: 372 KVAEANELIGLMKKR 386
+ EA +L+ + R
Sbjct: 525 LIKEARDLLDELCSR 539
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 1/255 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+A+ +EM + V LL Y++ ++ E + G P+ TYN V
Sbjct: 178 NALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM-RDKGCTPDIVTYNVV 236
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C+ G L + PN + ++L G ++ED +++ M + G
Sbjct: 237 VNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 296
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V +N+ I LC+ E A +L+ + G PN +Y L+H F K+ ++ A
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMA 356
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M + GC PD + LC+ GE + A+++ KG P + +++ GL
Sbjct: 357 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 416
Query: 369 SISKVAEANELIGLM 383
K EA EL+ M
Sbjct: 417 KAGKTKEALELLNEM 431
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 4/242 (1%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
V A NA++ G + + +R E +E ++ T + +I+ C G +++ ++
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARRWCAE----RAVERDAYTCDTLIRGLCGRGRTANALAV 182
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L EM R+ P+ + +LL K Y+ K+L M G + YN+ + +C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
R ++A L + S G +PN +Y ++ G E A++L M GC P+
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
F M FLC+ G E AL+V G P+ + L+ K+ +A + LM
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362
Query: 385 KR 386
R
Sbjct: 363 SR 364
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 100/207 (48%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TY ++++ C+ +L EMR K P+ + +++ G +E + +D +
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ + G YNI ++ LC +R E+A+ L+ M +G PN+ T+ LI +
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 312
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+G +E A ++ + GC P+S + + C+ + + A+ +++G P +
Sbjct: 313 KGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 372
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+L+T L +V A EL+ +K +
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDK 399
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 10/250 (4%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPD-LRQNERFHVHSIVLYGQANMI 127
P + + F++ +S L + ++LE++ P+ L N H + + +
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHA-----FCKQKKM 351
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D AM + M G + + N LL S + + + K G P +YN
Sbjct: 352 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL-KDKGCAPVLISYNT 410
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VI ++G + +L EM K ++P+ + + AG +E + ED + ++ G
Sbjct: 411 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 470
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I +YN I LCK + + A L M+ G PN TY LI G EG ++ A+
Sbjct: 471 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 530
Query: 308 KLFASMTNGG 317
L + + G
Sbjct: 531 DLLDELCSRG 540
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 144/326 (44%), Gaps = 34/326 (10%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI 157
+E+ + +P Q V I++ + N + A+ ++EM + G+ +V +LN L+
Sbjct: 111 MEDFQVKPT--QKSYLTVFDILV--EENHVKRAIGFYKEMREKGIPPTVVSLNILIKA-- 164
Query: 158 LSKNYEEVK---RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
L KN E V+ R+F E P G +P+S TY +I C+ G S +L EM K +
Sbjct: 165 LCKNEETVESAFRLFREMPN-RGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLS 223
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ + L+ G + + ++ ++L+ M GI V Y+ + LCK S +A L
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMEL 283
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L+ M+ R + PN+ TY LI+G KEG A ++ M G +PD+ + LC
Sbjct: 284 LEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCA 343
Query: 335 GGEYETALKVCRASMAKG--------WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
Y+ A MA G W H +V GL + A +L M+ R
Sbjct: 344 ACNYQEAANFI-DEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTR 402
Query: 387 ---------------FPKSGDMWNAA 397
F K GD+ AA
Sbjct: 403 GISVEIGTFDCLVKCFCKRGDLNKAA 428
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 46/249 (18%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + +EM++ GL SV + +L+ G S N +E + E + GIEPN TY+
Sbjct: 207 ISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMI-INGIEPNVFTYS 265
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+SG SS +L M R+ + PN + L+ G KE K+ + ++L M
Sbjct: 266 SLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQ 325
Query: 247 G----------IASG--------------------------------VNVYNIRIQSLCK 264
G I SG V ++N+ +Q LC
Sbjct: 326 GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCN 385
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
A L M +RGI + T+ L+ F K G+L A ++ M GC PD
Sbjct: 386 NVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEG- 444
Query: 325 FFMFTYFLC 333
M+ +C
Sbjct: 445 --MWNVLMC 451
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 87/232 (37%), Gaps = 43/232 (18%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q+N +D A++ EEM G+ +V ++L+ G S + + + E + PN
Sbjct: 238 QSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELL-EVMVRRRLLPNM 296
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE-------- 234
TY+ +I C+ G IL MR + ++P+A +G +++G Y+
Sbjct: 297 VTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDE 356
Query: 235 -------------------------------DVGKVLQM---MEKCGIASGVNVYNIRIQ 260
D + Q+ M GI+ + ++ ++
Sbjct: 357 MALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVK 416
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
CK +A +L+ M+ G P+ + L+ G + +L +
Sbjct: 417 CFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVA 468
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A++ F+EM + G+ + +L G +K ++V R+ KV G P+S T N
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM-KVSGCCPDSITCNA 276
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC+ G +++L ++ + L+ G ++ +Y++V + + M K G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V +Y I I+ C++ + A +L+ M RG+ P+ Y LI GF G L+ A+
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L ++ C P S + + +C+ G + A ++ G P T +L+ GL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456
Query: 368 ASISKVAEANEL 379
++ EA L
Sbjct: 457 CKAGELEEARHL 468
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 142/341 (41%), Gaps = 37/341 (10%)
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
++ + L++ + F+ ++LEELK F V I Y ++ M + A+++F +M
Sbjct: 100 NLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSV-LIAAYAKSGMAEKAVESFGKMK 158
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+G + V N++L + + + ++ + K+ PN T+ ++ C++G +
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL-NYNPNRATFVILLNGLCKNGKT 217
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-------------------- 238
+ EM +K I PN + ++L+G + + +DV +
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 239 ---------------VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+LQ+ EK G G+ Y+ I L + KR +E + M GI
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+P++ Y LI GF + G ++ A + MT G PD+YC+ C G + A
Sbjct: 338 EPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARS 397
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ P T L+ G+ + EA ++ M+
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQME 438
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 10/249 (4%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMID 128
P + M ++I +S L QA + + +LL +K PD + GQ ID
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL-LDGFCKLGQ---ID 288
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + +K G + ++L+ G +K Y+EV+ + K GIEP+ Y +
Sbjct: 289 EAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA-GIEPDVVLYTIL 347
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM-MEKCG 247
I+ FCE G ++L +M ++ + P+ + L+ GF + D + LQ+ + K
Sbjct: 348 IRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFC-DVGLLDKARSLQLEISKND 406
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
Y I I +C+ +EA+ + + M + G P++ T+ LI G K G LE A+
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466
Query: 308 KLFASMTNG 316
LF M G
Sbjct: 467 HLFYKMEIG 475
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T+N VI + + + IL E++ +I+ F +L+A + K E + M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G V YN + + + + A A+ + ML PN T+ L++G K G
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A K+F MT G P++ + + LCQ + ++ G P T +L
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 364 VTGLASISKVAEANELIGLMKK 385
+ G + ++ EA L+ L +K
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEK 299
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 94/240 (39%), Gaps = 48/240 (20%)
Query: 116 HSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF- 172
++I++ G ++D A Q F +M+ G S+ NAL+ G + EE + +F +
Sbjct: 414 YTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKME 473
Query: 173 ----PKVY------------------------------------GIEPNSETYNKVIKSF 192
P ++ G P+S Y ++
Sbjct: 474 IGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWS 533
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLA--GFYKEHKYEDVGKVLQMMEKCGIAS 250
C G S +S+ + R P+ D L LA F K + V +L+M K
Sbjct: 534 CRKGKLSVAFSLWLKYLRS--LPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLN-NF 590
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ Y I + LC+ +RSEEA + + + N + LI+G K+GNLE A +F
Sbjct: 591 EIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIF 650
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+N+ I L K + +L+ + + I+ T+ LI + K G E A + F M
Sbjct: 99 HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
+ GC+PD + + + + Q + AL V + + P+ +T L+ GL K
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218
Query: 375 EANELIGLMKKR 386
+A ++ M ++
Sbjct: 219 DALKMFDEMTQK 230
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++D A++ + + + + N +LL ++ V+R+F + P PN T+
Sbjct: 137 LLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-----PNVFTF 191
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI C+ G+ + S+ + M+ P+ F L+ G+ K + ++V ++++ M +
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR 251
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + V YN I CK R E A M G+ N+ T+ + F KEG +
Sbjct: 252 SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A KLFA M G + + + C+ G + A+ + + +G + T LV
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
GL KVAEA +++ +M+K ++ ++ L
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 2/303 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + + + + QL+EE++ R + + + I + + ++ A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M + G+ +V + + E ++F + +V G+ N TY +I C
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTC 339
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G +L EM R+ + N + +L+ G KE K + VL+MMEK G+ +
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I K SE+A LL M ++G++ ++ Y LI G L+ AK L M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G EP+ + + G+ A+ + + + G+ P+ T +L+ GL +
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSI 519
Query: 374 AEA 376
EA
Sbjct: 520 DEA 522
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 130/321 (40%), Gaps = 2/321 (0%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
PL+ + +++ V L + +L ++ + +R NE + I + + A+
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMME-KAGVRANELLYTTLIHGHFMNKNSEKAL 418
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
EM GL + AL+ G +E K + T+ + G+EPN Y ++ +
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE-SGLEPNYIIYTTMMDA 477
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+SG ++L ++ +PN + L+ G K ++ M G+
Sbjct: 478 CFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPN 537
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y + LCK EA L + M+ +G+ + Y L+ G+ K+GNL A L A
Sbjct: 538 VQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKA 597
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G + D +C+ F C A +V + G P + L++ +
Sbjct: 598 KMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657
Query: 372 KVAEANELIGLMKKRFPKSGD 392
+ EA L M++ P D
Sbjct: 658 NLEEAISLQDEMERVLPSCTD 678
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F M + G V N+L+ G +EV+++ E + G + + TYN +I
Sbjct: 207 ARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR-SGCKADVVTYNALI 265
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ G + Y A M+R+ + N F + F KE + K+ M G+A
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I CK R ++A LLD M+ +G+ N+ TY L+ G KE + A+ +
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + + E AL + KG S +L+ GL +
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445
Query: 370 ISKVAEANELIGLMKK 385
+ K+ EA L+ M +
Sbjct: 446 VHKLDEAKSLLTKMDE 461
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I+PN Y+ +I C+ G S +++ EM+ K I PN + ++ GF ++
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++LQ M + I+ V YN I + K + EA L D ML RGI PN TY +I GF
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K+ L+ A+ +F M GC PD + F C + +++ +G V +
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428
Query: 358 STMKSLVTGLASISKVAEANEL 379
T +L+ G + + A +L
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDL 450
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 44/327 (13%)
Query: 104 RPDL---------RQNERFHVHSIVL----YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
RPDL R+ R ++S + + + + A+ TF ++ K GL V
Sbjct: 96 RPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFT 155
Query: 151 ALLLGCILSKNYEEVKRIFTEF--PKVY----------------------------GIEP 180
LL G L E +F + P V G++P
Sbjct: 156 TLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQP 215
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKV 239
+ TY + C+ GD+ S ++L +M S I+PN + ++ G K+ ++ D +
Sbjct: 216 DQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNL 275
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M+ GI + YN I C R A+ LL ML R I PN+ TY LI+ F K
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG A +L+ M G P++ + C+ + A + KG P T
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+L+ G ++ + EL+ M +R
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRR 422
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 1/244 (0%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
++ +V +A++ G + + +F E GI PN TYN +I FC SG S+
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD-KGIFPNIVTYNCMIGGFCISGRWSAA 307
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+L EM + I PN + L+ F KE K+ + ++ M GI YN I
Sbjct: 308 QRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
CK R + A+ + M ++G P++ T+ LI G+ ++ +L M G +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + + C G+ AL + + ++ G P T +L+ GL K+ +A E+
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487
Query: 382 LMKK 385
M+K
Sbjct: 488 AMQK 491
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 12/267 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ID M+ EM + GL + N L+ G L + + + G+ P
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS-SGVCP 461
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRR-----------KSIRPNATDFGLLLAGFYK 229
+ T N ++ C++G + M++ + P+ + +L+ G
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K+ + ++ + M GI Y+ I LCK R +EA + M S+ PN+ T
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI+G+ K G ++ +LF M G D+ + Y + G AL + + +
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T+++++TG S ++ A
Sbjct: 642 SSGVYPDTITIRNMLTGFWSKEELERA 668
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 14/262 (5%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKV 188
A + +EM + + +V NAL+ + + E ++ E P+ GI PN+ TYN +
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR--GIIPNTITYNSM 364
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I FC+ + + M K P+ F L+ G+ + +D ++L M + G+
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I C + A L M+S G+ P++ T L+ G G L+ A +
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484
Query: 309 LFASMTNG-----------GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+F +M G EPD + + L G++ A ++ +G VP
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544
Query: 358 STMKSLVTGLASISKVAEANEL 379
T S++ GL S++ EA ++
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQM 566
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 112/270 (41%), Gaps = 12/270 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + + +D A F M G V L+ G +K ++ + E P+ G+
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR-RGLVA 426
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN +I FC GD ++ + +M + P+ LL G K +D ++
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Query: 241 QMMEKC-----------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ M+K G+ V YNI I L + EA+ L + M RGI P+ T
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y +I G K+ L+ A ++F SM + P+ F C+ G + L++
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+G V +L+ G + + A ++
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDI 636
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 4/183 (2%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I + + I I+
Sbjct: 67 DLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 126
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G+ P++ T+ L+HG + + A LF + C PD
Sbjct: 127 CSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDV 182
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + + G P T + V G+ + A L+
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242
Query: 383 MKK 385
M++
Sbjct: 243 MEE 245
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 12/165 (7%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L +G Y+ ED + M + V +N + ++ +++R + +L M +
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
I+ ++ ++ LI F L A F +T G PD F + LC AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 343 ----KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
++CR P T +L+ GL +V EA L+ M
Sbjct: 172 DLFHQICR--------PDVLTFTTLMNGLCREGRVVEAVALLDRM 208
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A++ F+EM + G+ + +L G +K ++V R+ KV G P+S T N
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM-KVSGCCPDSITCNA 276
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC+ G +++L ++ + L+ G ++ +Y++V + + M K G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V +Y I I+ C++ + A +L+ M RG+ P+ Y LI GF G L+ A+
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L ++ C P S + + +C+ G + A ++ G P T +L+ GL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456
Query: 368 ASISKVAEANEL 379
++ EA L
Sbjct: 457 CKAGELEEARHL 468
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 142/341 (41%), Gaps = 37/341 (10%)
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
++ + L++ + F+ ++LEELK F V I Y ++ M + A+++F +M
Sbjct: 100 NLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSV-LIAAYAKSGMAEKAVESFGKMK 158
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+G + V N++L + + + ++ + K+ PN T+ ++ C++G +
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKL-NYNPNRATFVILLNGLCKNGKT 217
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-------------------- 238
+ EM +K I PN + ++L+G + + +DV +
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 239 ---------------VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+LQ+ EK G G+ Y+ I L + KR +E + M GI
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+P++ Y LI GF + G ++ A + MT G PD+YC+ C G + A
Sbjct: 338 EPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARS 397
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ P T L+ G+ + EA ++ M+
Sbjct: 398 LQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQME 438
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T+N VI + + + IL E++ +I+ F +L+A + K E + M
Sbjct: 98 THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G V YN + + + + A A+ + ML PN T+ L++G K G
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A K+F MT G P++ + + LCQ + ++ G P T +L
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277
Query: 364 VTGLASISKVAEANELIGLMKK 385
+ G + ++ EA L+ L +K
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEK 299
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 102/249 (40%), Gaps = 33/249 (13%)
Query: 116 HSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++I++ G ++D A Q F +M+ G S+ NAL+ G + EE + +F +
Sbjct: 414 YTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKME 473
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
I N + ++ + D++S+ +++ + + GL+L +
Sbjct: 474 ----IGKNPSLFLRLSQGADRVMDTASLQTMVERL---------CESGLILKAY------ 514
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
K+L + G+ + YN+ I CK K A L + +G P+ TY L
Sbjct: 515 ----KLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTL 570
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I GF + E A ++ M GC P S + + C+ G+ A + W
Sbjct: 571 IDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSL--------W 622
Query: 354 VPHFSTMKS 362
+ + ++ S
Sbjct: 623 LKYLRSLPS 631
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 115/278 (41%), Gaps = 21/278 (7%)
Query: 40 EKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLE 99
E+ R +++ NP L + GA + +D + V +L ++ +LL
Sbjct: 463 EEARHLFYKMEIGKNPSLFLRLSQGA----DRVMDTASLQTMVERLCESGLILKAYKLLM 518
Query: 100 ELK---TRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLL 154
+L PD+ +++++ G +A I+ A + F E+ G L+
Sbjct: 519 QLADSGVVPDI------MTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLID 572
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
G E+ R+ + K G P+S Y ++ C G S +S+ + R
Sbjct: 573 GFHRVDREEDAFRVLDQMVK-NGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS--L 629
Query: 215 PNATDFGLLLA--GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
P+ D L LA F K + V +L+M K + Y I + LC+ +RSEEA
Sbjct: 630 PSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLN-NFEIAPYTIWLIGLCQARRSEEAL 688
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ + + N + LI+G K+GNLE A +F
Sbjct: 689 KIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIF 726
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%)
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+N+ I L K + +L+ + + I+ T+ LI + K G E A + F M
Sbjct: 99 HNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMK 158
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
+ GC+PD + + + + Q + AL V + + P+ +T L+ GL K
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218
Query: 375 EANELIGLMKKR 386
+A ++ M ++
Sbjct: 219 DALKMFDEMTQK 230
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 1/259 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + A++ ++EM GL +V L+ G + ++ + +G+ P
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS-FGVVP 331
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N YN +I +C++G+ S S+ +E+ + I P+ + +L+ G + E+ +L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M+K G YN I CK E+A + M +GI+PN+ T+ LI G+ K
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G +E A L+ M G PD + + G + A ++ + G P+ T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 361 KSLVTGLASISKVAEANEL 379
L+ GL ++++A +L
Sbjct: 512 SCLIDGLCKDGRISDAIKL 530
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 11/296 (3%)
Query: 91 FNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
FN +S+L E K P++ F V I+ + + +++ A+ + +MD + ++ A N
Sbjct: 113 FNVLSRL-ESSKFTPNV-----FGV-LIIAFSEMGLVEEALWVYYKMD---VLPAMQACN 162
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
+L G + ++ + +++ + G PN TY +I C GD + + EM
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDM-VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
K I P + +L+ G E + + + + M G+ + YN + CK+ ++
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L ML G+ PN+ T+ LI G K + A+K M + G P+ + +
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G AL + +P T L+ GL + ++ EA+ L+ MKK+
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 110/272 (40%), Gaps = 36/272 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM + + +V L+ G E + +F + G+ PN TYN ++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMM 270
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ + EM + PN FG+L+ G K + K L M G+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 250 SGVNVYN-----------------------------------IRIQSLCKLKRSEEAKAL 274
+ VYN I I+ LC + R EEA L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M +G PN TY LI G+ KEGN+E A ++ + MT G EP+ F C+
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
G+ E A+ + + KG +P +L+ G
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A + A+ E++K+ + V + L+ G EE + E K G P
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK-KGFLP 401
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN +I +C+ G+ + ++M K I PN F L+ G+ K K E +
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G+ V Y I K ++EA L M G+ PN+ T LI G K+
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 301 GNLEGAKKLFASMT 314
G + A KLF + T
Sbjct: 522 GRISDAIKLFLAKT 535
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 7/296 (2%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY-GLRQ 144
S +H + LL ++ RP ++ V S + +A M D A+ F ++ G
Sbjct: 60 SSPSHLPRLLGLLPRMRHRPRFSESAALVVLSA--FSRALMPDAALAAFRDLPSLLGCNP 117
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPK-VYG--IEPNSETYNKVIKSFCESGDSSSV 201
V + N LL + ++ Y + F +G I PN +TYN +++S C GD
Sbjct: 118 GVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRA 177
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
S+ + +RR+ + P+ + L++G K + ++ +L M G+ + YN +
Sbjct: 178 VSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSG 237
Query: 262 LCKLKRSEEAKALLDGML-SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+ E+A + + ++ G PNL TYK ++ G K G + A ++++ M +
Sbjct: 238 CFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQA 297
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
D+ + + + LC+ G+ ++A +V + G V S SL+ G + + EA
Sbjct: 298 DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 4/273 (1%)
Query: 116 HSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+S ++ G A + +D+A+ +EM YG++ NALL GC + +E+ +++ +
Sbjct: 196 YSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLV 255
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G PN TY ++ C+ G + + M + + + +G+L+ G +
Sbjct: 256 RDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDV 315
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ +V M K G+ V+VYN I+ C++ R+ EA D GI+ + TY +
Sbjct: 316 DSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIM 374
Query: 294 IHGFGKEGNLEGAKKLFASMTN-GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
G G + A +L + N C PD F + LC+ G A ++ + G
Sbjct: 375 TKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSG 434
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ S++ + +ANE+ M K
Sbjct: 435 EELDVFSYSSMINRFCKDGRTHDANEVYKNMVK 467
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G E + +Y+ +I FC+ G + + M + +PN+ + L+ GF + K D
Sbjct: 434 GEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDA 493
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ M G + YN I LCK ++ +EA +L ML RG KP++ TY LI G
Sbjct: 494 IKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRG 553
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++ ++ A +++ + + G + D + + LC G+ + A + K P+
Sbjct: 554 LCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPN 613
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T +L+ G I + +A L
Sbjct: 614 LVTYNTLMDGFYEIGSIDKAASL 636
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 135/302 (44%), Gaps = 10/302 (3%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQ 123
AS +P D++ F + L + + N ++LE+ + + + + F S++ + +
Sbjct: 398 ASCSP----DKVTFGTLIHGLCENGYANRAFEILEDARNSGE--ELDVFSYSSMINRFCK 451
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNS 182
A + ++ M K G + + NAL+ G C +SK + +K I+ E G P
Sbjct: 452 DGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIK-IYIEMTS-NGCCPTI 509
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I C++ S+ EM + +P+ + L+ G ++ K + ++
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDE 569
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ G+ V V+NI I LC + +EA + M + PNL TY L+ GF + G+
Sbjct: 570 ILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGS 629
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A L+ ++ + G +PD + LC + + +A G +P T
Sbjct: 630 IDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSI 689
Query: 363 LV 364
LV
Sbjct: 690 LV 691
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 1/236 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G+RQ + N + G + S E + + P+ T+ +I CE+G ++
Sbjct: 364 GIRQ-ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANR 422
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ IL + R + + ++ F K+ + D +V + M K G +VYN I
Sbjct: 423 AFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALIN 482
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
C++ + +A + M S G P + TY LI G K + A L M G +P
Sbjct: 483 GFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKP 542
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
D + LC+ + + AL++ + G L+ GL S KV EA
Sbjct: 543 DIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEA 598
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+EM + G + + +L+ G K + RI+ E G++ + +N +I C
Sbjct: 533 KEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDA-GLQVDVMVHNILIHGLCS 591
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+G + I EM+ K+ PN + L+ GFY+ + + + G+ +
Sbjct: 592 AGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT 651
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
YN RI+ LC R+ E LL+ +L+ GI P + T+ L+ K G ++
Sbjct: 652 YNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 5/174 (2%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG----IASGVNVYNIRIQSLCKLKRSEE 270
P LL F + +Y D + IA + YNI ++SLC +
Sbjct: 117 PGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDR 176
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A +L + RG+ P+ TY L+ G K L+ A L M N G + D+ C+
Sbjct: 177 AVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLS 236
Query: 331 FLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ G +E A+KV + G P+ +T K ++ GL + + EA E+ M
Sbjct: 237 GCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRM 290
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 8/234 (3%)
Query: 115 VHSIVLYGQ--ANMIDH-----AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
VH++V Y A + H A+Q FE M + G+R S+ N L+ G +
Sbjct: 140 VHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALH 199
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F + K G+ P+ TYN++I FC D + +M+ + + P + +L+A F
Sbjct: 200 FFNQM-KAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAF 258
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
KE++ + +L MEK G+ V Y + + +LC + A+ L M +G+KPN
Sbjct: 259 AKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNS 318
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
Y +I+G+G+EG+ A +L M G P+ + + LC G+ + A
Sbjct: 319 VLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEA 372
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 1/240 (0%)
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V A AL+ C S + E +R+F P++ G+ PN TY +I + G +++
Sbjct: 38 VAACTALVHVCCQSGDVAEARRVFDVMPRL-GVAPNEVTYTALINGYFVRGHREMGFALF 96
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
AEMRR + PN + L+ + + +++ + M G+ V YNI I LC+
Sbjct: 97 AEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRH 156
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
+ ++A L + M GI+P++ T+ LI G+GK G + A F M G P +
Sbjct: 157 SKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTY 216
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ + A++ +G P T L+ A +++ A ++ M+K
Sbjct: 217 NELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEK 276
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 3/253 (1%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM + G+ ++ N L+ + ++ + +F E P V G+ N +YN +I C
Sbjct: 96 FAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMP-VKGVVHNVVSYNILIAGLC 154
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ MRR+ IRP+ F LL+ G+ K K + M+ G+ V
Sbjct: 155 RHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVV 214
Query: 254 VYNIRIQSLCKLKRSEEA-KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I C+++ A +A LD M RG+ P TY LI F KE ++ A + +
Sbjct: 215 TYNELICGFCRVRDIARAVRAFLD-MKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSE 273
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G E D + + + LC G+ A K+ ++ KG P+ ++ G
Sbjct: 274 MEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGS 333
Query: 373 VAEANELIGLMKK 385
+A LI M+K
Sbjct: 334 SYKALRLIMEMRK 346
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 2/242 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++++I ++ L + + QL E ++ R +R + I YG+A + +A+ F
Sbjct: 144 VSYNILIAGLCRHSKLKDAVQLFEAMR-REGIRPSIVTFNLLIDGYGKAGKMANALHFFN 202
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M GL SV N L+ G ++ R F + K G+ P TY +I +F +
Sbjct: 203 QMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDM-KERGLAPTKVTYTILIAAFAKE 261
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ + +L+EM + + + +G+LL E K K+ Q M+ G+ +Y
Sbjct: 262 NEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLY 321
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
++ I + S +A L+ M G+ PN+ +Y I EG + A+ L M +
Sbjct: 322 DMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEH 381
Query: 316 GG 317
G
Sbjct: 382 AG 383
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 79/194 (40%)
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+SGD + + M R + PN + L+ G++ E + M + G+ +
Sbjct: 49 CQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNL 108
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I C+ + A+ L D M +G+ N+ +Y LI G + L+ A +LF +
Sbjct: 109 YTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEA 168
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G P F + + G+ AL A G P T L+ G +
Sbjct: 169 MRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRD 228
Query: 373 VAEANELIGLMKKR 386
+A A MK+R
Sbjct: 229 IARAVRAFLDMKER 242
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + + N +D A EM+K GL V + LL + +++F + G
Sbjct: 255 IAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSM-DLKG 313
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++PNS Y+ +I + G S ++ EMR+ + PN + L + E K ++
Sbjct: 314 VKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAE 373
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
++ ME G+ + + I + + +L S +
Sbjct: 374 ALIDDMEHAGLQTSETICRILLDAKARLHGSTD 406
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 126/313 (40%), Gaps = 2/313 (0%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + + I V + +LL E+ R L N + I L + A
Sbjct: 281 SPPDVVTYGIMVHGYCTLSELETAIKLLSEMAAR-GLELNPVAYTSVIALLCDEGQVSDA 339
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ E+M +G+ ++ G + + F E K G+ + TY +I
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQK-RGLAADGVTYTALIN 398
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C +G+ +L EM K + +A + +L+ G+ K K + V M + +
Sbjct: 399 GLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y LCK A LL M S+G++ N+ TY LI+G K GNLE A +
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM 518
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G +PD Y + LCQ E + A + + + KG P T L+ G
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 371 SKVAEANELIGLM 383
+V L+ M
Sbjct: 579 GRVEGGKRLLEWM 591
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 21/334 (6%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD F+ +S + A +E++ R L + + I +A + A +
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVTYTALINGLCRAGELKEAER 411
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG------IEPNSETYN 186
+EM+ GL VDA+ +L Y +V ++ TE V+ + PN TY
Sbjct: 412 VLQEMEDKGL--DVDAVTY----TVLIDGYCKVGKM-TEAFLVHNKMVQKRVTPNVVTYT 464
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ C+ GD + +L EM K + N + L+ G K E + + M++
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V Y I +LC+ K + A +LL ML +GIKP + TY L++GF G +EG
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+L M P++ + C ++ ++ + +++ VP+ +T L+ G
Sbjct: 585 KRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKG 644
Query: 367 LASISKVAEA----NELIGLMKKRFPKSGDMWNA 396
+ EA +E+I +K F + +NA
Sbjct: 645 HCKARNMKEALYFHSEMI---EKGFRLTASSYNA 675
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+E N TYN +I C++G+ + +M ++P+ + ++ + + +
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+LQ M GI + YN+ + C R E K LL+ ML + I PN TY L+
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQ 609
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ E N++ +++ M + P+ + + C+ + AL + KG+
Sbjct: 610 YCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLT 669
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK-RFPKSGDMWN 395
S+ +L+ L K EA L M+K R D++N
Sbjct: 670 ASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYN 709
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q+ +D A +EM G++ ++ N L+ G +S E KR+ E+ I PN+
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL-EWMLEKNIHPNT 600
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++K +C + S I M + + PN + +L+ G K ++
Sbjct: 601 TTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSE 660
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G + YN I+ L K K+ EA+ L + M + D Y I E N
Sbjct: 661 MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDN 720
Query: 303 LEGAKKL 309
LE L
Sbjct: 721 LESTLAL 727
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 47/248 (18%)
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+YG+ S ++ NA+L C L +E ++F E P E N+ +YN ++K+ C +G
Sbjct: 219 QYGISPSPESCNAVL--CRLP--LDEAVQLFQELP-----EKNTCSYNILLKALCTAGRI 269
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ + EM P+ +G+++ G+
Sbjct: 270 KDAHQLFDEMASP---PDVVTYGIMVHGY------------------------------- 295
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
C L E A LL M +RG++ N Y +I EG + A ++ M G
Sbjct: 296 ----CTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
D+ F C+ G+ A +G T +L+ GL ++ EA
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 379 LIGLMKKR 386
++ M+ +
Sbjct: 412 VLQEMEDK 419
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 142/312 (45%), Gaps = 12/312 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLL---EELKTRPDLRQNERFHVHSIVLYG--QANMI 127
L+++++ + L +A A Q+L + L +P++ ++S ++Y + ++
Sbjct: 82 LNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVV------MYSTIIYSLCKDKLV 135
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A + +M + V N L+ GC++ +E +F + + I+P+ T+N
Sbjct: 136 IDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQM-LLKNIKPDIYTFNI 194
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+ G+ ++LA M ++S+ P+ + L+ G++ + V M + G
Sbjct: 195 LVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRG 254
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V+ Y++ I LCK K +EA LL M S+ + PN TY LI G K G + A
Sbjct: 255 VTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAW 314
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M N G D + LC+ + + A+ + +G P T LV GL
Sbjct: 315 DLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGL 374
Query: 368 ASISKVAEANEL 379
++ +A E+
Sbjct: 375 CKNGRLKDAQEV 386
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 109/238 (45%), Gaps = 26/238 (10%)
Query: 142 LRQSVD----ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
++QSVD N+L+ G L K + +F + G+ P+ +Y+ +I C++
Sbjct: 216 IKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMAR-RGVTPDVHSYSVMINGLCKTKM 274
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
++L EM KS+ PN + L+ G +K + D ++ M G + V YN
Sbjct: 275 VDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNS 334
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK--------- 308
+ +LCK + ++A LL + +GI+P++ TY L+ G K G L+ A++
Sbjct: 335 LLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKG 394
Query: 309 ------------LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
L + M + GC P+ F + L + + A+++ R +A+G +
Sbjct: 395 YHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGLL 452
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 136/320 (42%), Gaps = 18/320 (5%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
F + L + NHF+ + L +++ R DL N V+ GQ + D +T
Sbjct: 11 FGKIFASLVKINHFHTVISLSHQMELRGIQTDLV-NLNILVNCFCHLGQVCLNDKVKETL 69
Query: 135 EEMDKY---GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
D G + + + L+ G + ++ + ++PN Y+ +I S
Sbjct: 70 HFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLL-VQPNVVMYSTIIYS 128
Query: 192 FCESGDSSSVYSILAEMRRKSIRP-----NATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
C+ + + ++M K I P N +G L+ G KE VG QM+ K
Sbjct: 129 LCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEA----VGLFNQMLLK- 183
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + +NI + LCK ++A+ +L M+ + + P++ TY L+ G+ A
Sbjct: 184 NIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKA 243
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+F +M G PD + + + LC+ + A+ + + +K P+ T SL+ G
Sbjct: 244 TFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDG 303
Query: 367 LASISKVAEANELIGLMKKR 386
L ++ +A +L+ M R
Sbjct: 304 LHKSGRIFDAWDLVNEMHNR 323
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 89/209 (42%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I P+ TYN ++ G + +M K+I+P+ F +L+ G KE + +
Sbjct: 150 ISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKAR 209
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
VL +M K + V YN + +K+ +A + + M RG+ P++ +Y +I+G
Sbjct: 210 NVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGL 269
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K ++ A L M + P++ + L + G A + +G
Sbjct: 270 CKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADV 329
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ L +V +A L+ +K +
Sbjct: 330 ITYNSLLDALCKNHQVDKAITLLTKIKDQ 358
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 5/267 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI--FTEFPKVYGIEPNSET 184
I A F E+ K GLR + + N L+ G S+N +E R+ E ++Y P+ T
Sbjct: 239 IRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIY---PDVFT 295
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ +I C+ G + EM+++ +RPN F L+ G + + + M
Sbjct: 296 YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQML 355
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ + +YN + LCK+ +A+ L+D M G+KP+ TY LI G+ KEG+LE
Sbjct: 356 TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLE 415
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A ++ M G D+ F C+ G A + R + G P +T ++
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475
Query: 365 TGLASISKVAEANELIGLMKKRFPKSG 391
G V +L+ M+ K G
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPG 502
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 141/296 (47%), Gaps = 12/296 (4%)
Query: 76 MAFSIAVSKLSQANHFNA---ISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
++F+ ++ L ++ + + + + +EE + PD+ +S++++G + +D A
Sbjct: 259 VSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDV------FTYSVLIHGLCKEGRLDVA 312
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q F+EM + GLR + AL+ G S+ + + + + G++P+ YN ++
Sbjct: 313 EQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTM-GVKPDLVMYNTLLN 371
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ GD + ++ EMR ++P+ + L+ G+ KE E ++ + M + G+
Sbjct: 372 GLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ I C+ R +A+ L M+ G+KP+ TY +I G+ K+GN++ KL
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
M G +P + + LC+ G+ + A + A + G P T L+ G
Sbjct: 492 KEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEG 547
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
++ Y + + A+Q F + + LL I S + + ++E + YG
Sbjct: 160 MIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILE-YG 218
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P + YN +I FC+ G I E+R++ +RP F L+ G K ++
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ + ME+ I V Y++ I LCK R + A+ L D M RG++PN T+ LI G
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ ++ A + M G +PD + LC+ G+ A K+ G P
Sbjct: 339 CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDK 398
Query: 358 STMKSLVTGLASISKVAEANEL 379
T +L+ G + A E+
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEI 420
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ S ++++ +E+ P + +L+ F KE D + + K G
Sbjct: 194 LLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG 253
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ +N I LCK + +E L M I P++ TY LIHG KEG L+ A+
Sbjct: 254 LRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE 313
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF M G P+ F C+ ++A+ + G P +L+ GL
Sbjct: 314 QLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGL 373
Query: 368 ASISKVAEANELIGLMK 384
+ V +A +L+ M+
Sbjct: 374 CKVGDVNKARKLVDEMR 390
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 136/297 (45%), Gaps = 31/297 (10%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A + E++ G +++ N+L+ G ++K + +V I E G+ P
Sbjct: 569 YCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSN-RGLSP 627
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ Y +I +C+ GD + Y++ EM K + PN L++ FY++ K+++ VL
Sbjct: 628 NTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVL 687
Query: 241 Q--------------MMEKCGIASGVN------------VYNIRIQSLCKLKRSEEAKAL 274
Q +E +A+ ++ ++NI I LCKL R E+AK L
Sbjct: 688 QNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNL 747
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L + +G + TY LIHG G ++ A L +M + G P+ + Y LC+
Sbjct: 748 LADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCK 807
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
GE A+ + + KG P+ T +L+ + EA +L K+R + G
Sbjct: 808 SGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKL----KQRMIEEG 860
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 154/342 (45%), Gaps = 42/342 (12%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQTFEEMDKY 140
+++L+Q A + E+++ L ++F V + Y + + HA++ EEM K
Sbjct: 215 LNRLAQTGDLGATVAVFEQMQRAGALP--DKFTVAIMAKAYCKVKGVVHALEFVEEMTKM 272
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G+ ++ A +A++ G + +R+ P G PN TY ++K +C +
Sbjct: 273 GVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPG-RGFSPNIVTYTLLVKGYCNEKNMEE 331
Query: 201 VYSILAEMRR-KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
++ E+R+ K + + FG ++ G+ + + ED ++L M + + VYNI I
Sbjct: 332 AEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMI 391
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE------------------- 300
CKL R EA +L M G++P+ +Y L+ G+ K+
Sbjct: 392 NGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFA 451
Query: 301 ----------------GNLEGAKKLFASMTNGGCEPDSY-CFFMFTYFLCQGGEYETALK 343
G+++ A +L+ M G P+ C + F + G+ E AL
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFF-KSGKTEKALN 510
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ + ++A+G + +T +++ GL I ++ EA EL+ MK+
Sbjct: 511 LWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQ 552
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 35/300 (11%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALL--------LG------------------ 155
A +D A+Q F+EM G R S+ + N++L LG
Sbjct: 184 ANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDK 243
Query: 156 ---CILSKNYEEVKRI-----FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
I++K Y +VK + F E G+E N Y+ V+ +CE G ++ +L
Sbjct: 244 FTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDS 303
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNVYNIRIQSLCKLK 266
+ + PN + LL+ G+ E E+ V+Q + K + V+ I C++
Sbjct: 304 LPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMG 363
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R E+A LL+ M+ ++ NL Y +I+G+ K G + A + MT G PD+Y +
Sbjct: 364 RMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYN 423
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G A + + G+ T +L+ G S+ + +A L LM K+
Sbjct: 424 SLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 138/346 (39%), Gaps = 49/346 (14%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHA 130
+D F ++ Q ++LL E+ D R V++I++ G + + A
Sbjct: 347 VDEAVFGAVINGYCQMGRMEDAARLLNEMV---DSRLQVNLFVYNIMINGYCKLGRMVEA 403
Query: 131 MQTFEEMDKYGLRQSVDALNALLLG-C---ILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
EM G+R + N+L+ G C +++K +E + G + TYN
Sbjct: 404 HNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRN-----GFAATTLTYN 458
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++K FC G + M +K I PN LL GF+K K E + +
Sbjct: 459 ALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLAR 518
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+A +N I LCK++R EA+ L+D M P++ TY+ L G+ K G+++ A
Sbjct: 519 GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRA 578
Query: 307 KKL--------FAS---------------------------MTNGGCEPDSYCFFMFTYF 331
++ FA M+N G P++ +
Sbjct: 579 SRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAG 638
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
C+ G+ TA + + KG VP+ SLV+ K EAN
Sbjct: 639 WCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEAN 684
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 117 SIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+IV++G + I+ A ++ G ++L+ GC S + +V +
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSAS-GFVDVAFDLRDTML 787
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ PN TYN +I C+SG+ S S+ ++ K I PNA + L+ K+
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ K+ Q M + GI V Y+I I LC EEA LLD M+ + PN TY LI
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907
Query: 295 HGF 297
G+
Sbjct: 908 QGY 910
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 2/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A++ + M K G+ + + + LL G S E+ ++ E G+ N+ T+N
Sbjct: 470 IDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKE-TLARGLAKNTTTFN 528
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+ ++ +M++ P+ + L +G+ K + ++L +E
Sbjct: 529 TVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENL 588
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A + +N I K+ + +L M +RG+ PN Y LI G+ KEG+L A
Sbjct: 589 GFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTA 648
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L+ M G P+ + + G+++ A V + + +P S + +
Sbjct: 649 YNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGK 708
Query: 367 LAS-ISKVAEANE 378
+A+ I VA N
Sbjct: 709 VANFIDTVAGGNH 721
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 77/189 (40%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N VI C+ G ++LA+++ K + + L+ G + + M
Sbjct: 728 WNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTML 787
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ + YN I LCK A +L + ++GI PN TY LI K+G +
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYIT 847
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A KL M G P + + + LC G E A+K+ + P++ T +L+
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907
Query: 365 TGLASISKV 373
G V
Sbjct: 908 QGYVRCESV 916
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 138/311 (44%), Gaps = 3/311 (0%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
S D + +S +S +A +LL+E+ +R LR + + + ++ + A
Sbjct: 78 STPDMVTYSTLLSGYCKAGKVEESRELLKEVISR-GLRPDALMYTKVVASLCKSARLGEA 136
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ EEM + G ++ N L+ GC KN E + + G++ + TYN ++
Sbjct: 137 LELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKM-AASGVKADVVTYNTLMD 195
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G +L M+ P+ + + G K K D +VL+ M
Sbjct: 196 GLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDP 255
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN + LCK + + A +++ M S G N+ Y ++ G K G + A+ +
Sbjct: 256 NVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSV 315
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+M GC PD + LC+ G+ E A++ R +G P+ T SLV GL S
Sbjct: 316 MEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCS 375
Query: 370 ISKVAEANELI 380
++AEA ++
Sbjct: 376 CGRLAEAERMV 386
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 118/259 (45%), Gaps = 13/259 (5%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A ++M G++ V N L+ G + +E +++ E K G P+ Y+
Sbjct: 168 LEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL-ERMKASGCAPDVVAYS 226
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ C+SG + +L +MR PN + +L G K K + L+MME+
Sbjct: 227 SFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK---IDTALEMMEQM 283
Query: 247 GIASGVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ G + Y+ + LCKL R++EA+++++ M G +P++ TY L++G K G
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR-----ASMAKGWVPHF 357
+E A + M GC+P++ + + LC G A ++ P
Sbjct: 344 IEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSV 403
Query: 358 STMKSLVTGLASISKVAEA 376
ST +L+ GL ++ +A
Sbjct: 404 STYNALIGGLCKAGRIDDA 422
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 1/251 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
E M ++ +V + N LL G C L + +E + + + P+ TY+ ++ +
Sbjct: 33 LETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGY 92
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++G +L E+ + +RP+A + ++A K + + ++L+ M + G +
Sbjct: 93 CKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTL 152
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I C+ K E A +LL M + G+K ++ TY L+ G K G L+ A++L
Sbjct: 153 ITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLER 212
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M GC PD + F Y LC+ G+ A +V P+ T +++ GL K
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGK 272
Query: 373 VAEANELIGLM 383
+ A E++ M
Sbjct: 273 IDTALEMMEQM 283
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 12/271 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + L +A QLLE +K PD+ F V+ + G+ + A
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSF-VYGLCKSGK---VLDA 241
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q E+M +V N +L G S + + + G N Y+ V+
Sbjct: 242 HQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVD 301
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ G + S++ M R RP+ + L+ G K K E+ + ++ M G
Sbjct: 302 GLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-----IKPNLDTYKHLIHGFGKEGNLEG 305
Y + LC R EA+ +++ M S G P++ TY LI G K G ++
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDD 421
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
A K F M + GC+PD + L + G
Sbjct: 422 ALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
MD+ G + NAL+ G + +R+ E I+PN +YN +++ C+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLL-ETMAARDIQPNVVSYNGLLEGLCKLE 59
Query: 197 DSSSVYSILAEMRRKSIR--PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
++ +M + R P+ + LL+G+ K K E+ ++L+ + G+ +
Sbjct: 60 RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y + SLCK R EA LL+ M+ G P L T+ LI G +E NLE A L M
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G + D + LC+ G + A ++ A G P S V GL KV
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 375 EANELIGLMK 384
+A++++ M+
Sbjct: 240 DAHQVLEQMR 249
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 37/288 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF--PKVY----------- 176
A+ TF ++ K G +V + LL G + E +F + P V
Sbjct: 132 ALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPNVVTFTTLMNGLCR 191
Query: 177 -----------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS-IRPNAT 218
G++PN TY ++ C+ GD+ S ++L +M S I+PN
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 219 DFGL-----LLAGFYKEHKYEDVGKVLQ-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+ L ++ GF ++ + ++LQ M+E+ I+ V YN I + K + EA+
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAE 311
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L D ML RGI P+ TY +I GF K+ L+ A+ +F M GC PD F
Sbjct: 312 ELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGY 371
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
C+ + +K+ G V + T +L+ G + + A +L+
Sbjct: 372 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 419
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 12/270 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N +D A F M G + N L+ G +K ++ ++ E + G+
Sbjct: 336 FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEA-GLVA 394
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TY +I FC+ GD ++ +L EM + PN LL G K +D ++
Sbjct: 395 NTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMF 454
Query: 241 QMMEKC-----------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ M+K G+ V YNI I L + EA+ L + M RGI P+ T
Sbjct: 455 KAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTIT 514
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y +IHG K+ L+ A ++F SM + P+ F C+ G + L++
Sbjct: 515 YNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG 574
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+G V + T +L+ G + + A ++
Sbjct: 575 RRGIVANAITYITLIHGFRKVGNINGALDI 604
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 132/315 (41%), Gaps = 19/315 (6%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ +S + + N +A + + T+ PD+ I Y +A +D ++
Sbjct: 327 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTL----IAGYCRAKRVDDGIK 382
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EM + GL + L+ G + + + E G+ PN T N ++
Sbjct: 383 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVS-SGVCPNVVTCNTLLDGL 441
Query: 193 CESGDSSSVYSILAEMRR-----------KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
C++G + M++ + P+ + +L++G E K+ + ++ +
Sbjct: 442 CDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 501
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M GI YN I LCK R +EA + D M S+ PN+ T+ LI+G+ K G
Sbjct: 502 EMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 561
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ +LF M G ++ + + + G AL + + MA G P T++
Sbjct: 562 RVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIR 621
Query: 362 SLVTGLASISKVAEA 376
+++TGL S ++ A
Sbjct: 622 NMLTGLWSKEELKRA 636
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 11/239 (4%)
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
S + E +++ E + I P+ TYN +I +F + G + EM + I P+
Sbjct: 268 SGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTI 327
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ ++ GF K+++ + + +M G + + +N I C+ KR ++ LL M
Sbjct: 328 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM 387
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
G+ N TY LIHGF + G+L A+ L M + G P+ LC G+
Sbjct: 388 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKL 447
Query: 339 ETALKVCRASMA-----------KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ AL++ +A G P T L++GL + K EA EL M R
Sbjct: 448 KDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 506
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 122/305 (40%), Gaps = 50/305 (16%)
Query: 130 AMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNK 187
A Q +EM ++ + V NAL+ + + E + ++ E P+ GI P++ TY+
Sbjct: 274 AQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR--GIIPSTITYSS 331
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC+ + + M K P+ F L+AG+ + + +D K+L M + G
Sbjct: 332 MIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL-------------------- 287
+ + Y I C++ A+ LL M+S G+ PN+
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDAL 451
Query: 288 --------------------------DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
TY LI G EG A++L+ M + G PD
Sbjct: 452 EMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 511
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + + LC+ + A ++ + +K + P+ T +L+ G +V + EL
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571
Query: 382 LMKKR 386
M +R
Sbjct: 572 EMGRR 576
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 84/214 (39%), Gaps = 13/214 (6%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ ++ ++K FC S ++ + P F LL G E + + +
Sbjct: 112 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLF 171
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M K + + + N LC+ R EA ALLD ML G++PN TY ++ G K
Sbjct: 172 HQMCKPNVVTFTTLMN----GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227
Query: 301 GNLEGAKKLFASMTN-GGCEPDSYCF------FMFTYFLCQGGEYETALKVCRASMAKGW 353
G+ A L M +P+ + M F C G + A ++ + + +
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGF-CSSGRWSEAQQLLQEMLERKK 286
Query: 354 V-PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ P T +L+ K EA EL M R
Sbjct: 287 ISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
++ + +++ A + F M + + N LL S N + V++ F + GI
Sbjct: 169 VFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA-GIA 227
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TYN +I C+ GD + + +MR + P+ + L+ G+ K E+V +
Sbjct: 228 PSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASL 287
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M+ G + YN I CK ++ A M + G+KPN+ TY LI F K
Sbjct: 288 FNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 347
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG ++GA KL M G P+ + + C+ G A K+ + G + T
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+L+ GL ++ EA E+ M K
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLK 433
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++++ + F +M + GL V N+L+ G + EEV +F E V G P+ TYN
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV-GCVPDIITYN 304
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ + +EM+ ++PN + L+ F KE + K+L M +
Sbjct: 305 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRT 364
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ Y I + CK EA LL+ ML G+K N+ TY L+ G K G + A
Sbjct: 365 GLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEA 424
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+++F SM G P+ + + + E A+K+ + P S++ G
Sbjct: 425 EEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWG 484
Query: 367 LASISKVAEANELIGLMKKR 386
S K+ E ++ MK R
Sbjct: 485 HCSQRKLEETKLILEEMKSR 504
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GI 178
YG+ ++ F EM G + N L+ C +E++ R F F ++ G+
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLI-NCYCK--FEKMPRAFEYFSEMKNNGL 331
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN TY+ +I +FC+ G +L +MRR + PN + L+ K + K
Sbjct: 332 KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 391
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L M + G+ + Y + LCK R EA+ + ML GI PN Y L+HG+
Sbjct: 392 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 451
Query: 299 KEGNLEGAKKLFASMTNGGCEPD 321
K +E A K+ MT +PD
Sbjct: 452 KAERMEDAMKILKQMTECNIKPD 474
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + M+ A++ +M + GL + +L+ + N E ++ + + G++
Sbjct: 345 FCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA-GVKL 403
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY ++ C++G + M + I PN + L+ G+ K + ED K+L
Sbjct: 404 NIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M +C I + +Y I C ++ EE K +L+ M SRGI N +I + K
Sbjct: 464 KQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKA 523
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G A F M + G E + + LC+ G E A+ ++ G P+ +
Sbjct: 524 GKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVY 583
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL + + A +L M+ R
Sbjct: 584 TSLIDGLCXNNCIESAKKLFDEMQCR 609
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 1/247 (0%)
Query: 110 NERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
N++ + + Y +A ++ AM+ ++M + ++ + +++ G + EE K I
Sbjct: 439 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLIL 498
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E K GI N +I ++ ++G SS + EM+ + + +L+ G +
Sbjct: 499 EEM-KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCE 557
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E M G+ V VY I LC E AK L D M RG+ P++
Sbjct: 558 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITA 617
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI G K GNL+ A L + MT E D + + Q GE A K +
Sbjct: 618 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMI 677
Query: 350 AKGWVPH 356
KG +P
Sbjct: 678 EKGILPE 684
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 2/310 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S + + +LL +++ R L NE + I +A + A +
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMR-RTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M + G++ ++ ALL G + E + +F K GI PN + Y ++ + ++
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK-DGISPNQQVYTALVHGYIKA 453
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
IL +M +I+P+ +G ++ G + K E+ +L+ M+ GI++ +
Sbjct: 454 ERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 513
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + K +S +A M G++ + TY LI G + G +E A F M +
Sbjct: 514 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G +P+ + LC E+A K+ +G P + +L+ G + E
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 633
Query: 376 ANELIGLMKK 385
A LI M +
Sbjct: 634 ALVLISRMTE 643
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 89/237 (37%), Gaps = 35/237 (14%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S ++ + F E G + MR P A LL K + V K
Sbjct: 160 SGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFN 219
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M GIA V YN+ I LCK E ++ L M G+ P++ TY LI G+GK G
Sbjct: 220 DMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVG 279
Query: 302 NLEGAKKLFASMTNGGCEPD---------SYCFF-----MFTYF---------------- 331
+LE LF M + GC PD YC F F YF
Sbjct: 280 SLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYS 339
Query: 332 -----LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
C+ G + A+K+ G +P+ T SL+ + EA +L+ M
Sbjct: 340 TLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 396
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 54/136 (39%)
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
SG V+++ +L EEA M + P + L+H K GN + +K
Sbjct: 157 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRK 216
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
F M G P + + + +LC+ G+ E + ++ G P T SL+ G
Sbjct: 217 FFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 276
Query: 369 SISKVAEANELIGLMK 384
+ + E L MK
Sbjct: 277 KVGSLEEVASLFNEMK 292
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 16/318 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL--KTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
D +AF+ + +A +LL + + RPD+ +++ V++G D
Sbjct: 41 DVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDV------FLYTSVIHGYCKAGDLDT 94
Query: 132 QTFEEMDKYGLRQSVDALN--ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
F + + S+D ++ ++ G SK +E +F E K G PN Y VI
Sbjct: 95 GYFRAVTP---KASLDVISYTTVIKGLADSKRIDEACELFEEL-KTAGCSPNVVAYTAVI 150
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
++G EM S P T + +++ G K D KV + M + G
Sbjct: 151 DGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCV 210
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I K + +EA+ LLD ML++G +P TY ++HGF K + AK++
Sbjct: 211 PDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEV 270
Query: 310 FASMTNGGCEPDSYCFF-MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
A M GCEP + F + +Y+L + G E A +V A+G P SL+ L
Sbjct: 271 IAQMRERGCEPGLFIFTSLLSYYLSK-GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLF 329
Query: 369 SISKVAEANELIGLMKKR 386
S +V EA + M ++
Sbjct: 330 STGRVPEARHVFDSMIEK 347
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 117/272 (43%), Gaps = 3/272 (1%)
Query: 116 HSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++ V+ G A+ ID A + FEE+ G +V A A++ G + + E+ + F E
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ P TY VI C++ + +M +K P+ + L+ GF K K
Sbjct: 171 GSSCV-PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 229
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ K+L +M G Y + CKL EAK ++ M RG +P L + L
Sbjct: 230 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 289
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ + +G E A ++ MT GC PD + L G A V + + KG
Sbjct: 290 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 349
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T +++ + I V A E++ LM K
Sbjct: 350 APDALTYGTIIQNFSKIGNVEAAGEILELMAK 381
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 149/361 (41%), Gaps = 37/361 (10%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPD---------------- 106
++ P++ LD ++++ + L+ + + +L EELKT P+
Sbjct: 99 AVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGR 158
Query: 107 ----LRQNERFH---------VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNA 151
L+ E +++V+ G +A M+ A + FE+M + G
Sbjct: 159 IEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTT 218
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
L+ G + +E +++ + G EP + TY ++ FC+ + ++A+MR +
Sbjct: 219 LIDGFSKASKMDEARKLL-DVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 277
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
P F LL+ + + + E+ +VL M G A V +Y I L R EA
Sbjct: 278 GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEA 337
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ + D M+ +G P+ TY +I F K GN+E A ++ M G PD + +
Sbjct: 338 RHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 397
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM--KKRFPK 389
+ + A V +A G P+ T L+ GL K A L M K+ P
Sbjct: 398 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPP 457
Query: 390 S 390
+
Sbjct: 458 T 458
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 148/379 (39%), Gaps = 54/379 (14%)
Query: 58 ILDICCGASLAPES-------------PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR 104
++D C A + P++ P D + ++ + S+A+ + +LL+ + T+
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 105 PDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
+ SIV + + +MI+ A + +M + G + +LL + E
Sbjct: 243 GP--EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E ++ TE G P+ Y +I +G + M K P+A +G +
Sbjct: 301 EAYQVLTEM-TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ F K E G++L++M K G+ YN + KL+R ++A + D M++ GI
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419
Query: 284 KPN------------------------------------LDTYKHLIHGFGKEGNLEGAK 307
KPN L +Y LI G GK G + A
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
F M + G P+ + + Y L + G A K+ + G P +L+TGL
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539
Query: 368 ASISKVAEANELIGLMKKR 386
S V A ++ M KR
Sbjct: 540 IDSSMVDTAWDVFQEMMKR 558
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 115/281 (40%), Gaps = 19/281 (6%)
Query: 96 QLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
Q+L E+ R PD+ + I L + A F+ M + G A +AL
Sbjct: 304 QVLTEMTARGCAPDVI----LYTSLIDLLFSTGRVPEARHVFDSMIEKGC-----APDAL 354
Query: 153 LLGCILSKNYEEVKRI-----FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
G I+ +N+ ++ + E G+ P+ YN ++ + + + +
Sbjct: 355 TYGTII-QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQSLCKLK 266
M I+PNA F +L+ G +K+ K + + +M+EK + + Y I I L K
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R EA M+ RGI P TY LI+ K G + AKKL M G PD +
Sbjct: 474 RVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 533
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L +TA V + M +G P+ T K L G
Sbjct: 534 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 574
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 5/249 (2%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G ++ + N ++ G +E + F G EP+ + +I FC++G
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID-NGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ +L + ++ RP+ + ++ G+ K D G + K + V Y I+
Sbjct: 61 GHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDL-DTGYFRAVTPKASL--DVISYTTVIK 116
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L KR +EA L + + + G PN+ Y +I G K G +E K F M+ C P
Sbjct: 117 GLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVP 176
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + LC+ A KV + KG VP T +L+ G + SK+ EA +L+
Sbjct: 177 TRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236
Query: 381 GLMKKRFPK 389
+M + P+
Sbjct: 237 DVMLTKGPE 245
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 12/245 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVL-YGQANMIDH 129
D + + + S+ + A ++LE + PD F +S++ Y + +D
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC-----FAYNSLMDGYVKLERVDQ 406
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A ++ M G++ + N L+ G + +F E + + P +Y +I
Sbjct: 407 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
++G S + EM + I P + L+ K + + K+++ M K G+
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF---GKEGNLEGA 306
V Y+ I L + A + M+ RG PN TYK L GF G+ +LE
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 586
Query: 307 KKLFA 311
K+ F+
Sbjct: 587 KQHFS 591
>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
Length = 619
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++D A++ + + + + N +LL ++ V+R+F + P PN T+
Sbjct: 137 LLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-----PNVFTF 191
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI C+ G+ + S+ + M+ P+ F L+ G+ K + ++V ++++ M +
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR 251
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + V YN I CK R E A M G+ N+ T+ + F KEG +
Sbjct: 252 SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A KLFA M G + + + C+ G + A+ + + +G + T LV
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
GL KVAEA +++ +M+K ++ ++ L
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F M + G V N+L+ G +EV+++ E + G + + TYN +I
Sbjct: 207 ARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR-SGCKADVVTYNALI 265
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ G + Y A M+R+ + N F + F KE + K+ M G+A
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I CK R ++A LLD M+ +G+ N+ TY L+ G KE + A+ +
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + + E AL + KG S +L+ GL +
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445
Query: 370 ISKVAEANELIGLMKK 385
+ K+ EA L+ M +
Sbjct: 446 VHKLDEAKSLLTKMDE 461
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 4/265 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG+ +D Q EEM + G + V NAL+ C E + K G+
Sbjct: 233 YGKCGELDEVEQLVEEMRRSGCKADVVTYNALI-NCFCKFGRMETAYGYFAAMKREGVMA 291
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T++ + +FC+ G + A+MR + + N + L+ G K + +D +L
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M + G+ V Y + + LCK ++ EA+ +L M G++ N Y LIHG
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMN 411
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
N E A L + M N G E D + LC + + A + G P++
Sbjct: 412 KNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIY 471
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
+++ KV EA I +++K
Sbjct: 472 TTMMDACFKSGKVPEA---IAMLQK 493
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + + + + QL+EE++ R + + + I + + ++ A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M + G+ +V + + E ++F + +V G+ N TY +I C
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTC 339
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G +L EM R+ + N + +L+ G KE K + VL+MMEK G+ +
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I K SE+A LL M ++G++ ++ Y LI G L+ AK L M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G EP+ + + G+ A+ + + + G+ P+
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPN 502
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 23/278 (8%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A+ +EM + G+ +V L+ G + E + + K G+ N
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKA-GVRANE 398
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I + +S +L+EM+ K + + + +G L+ G HK ++ +L
Sbjct: 399 LLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTK 458
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN---------------- 286
M++ G+ +Y + + K + EA A+L +L G +PN
Sbjct: 459 MDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVH 518
Query: 287 ----LD--TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
LD Y L+ G+ K+GNL A L A M + G + D +C+ F C
Sbjct: 519 KGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPE 578
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
A +V + G P + L+T + I ++ N+
Sbjct: 579 AREVFSEMIGHGIAPDRAVYNCLITQIPEIRELGGGNK 616
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ +M++ ++ V NA++ ++ + +FTE GI P+ TY+ +I
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD-KGIFPDVITYSGMI 118
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
SFC SG + +L +M + I P+ F L+ KE K + ++ M + GI
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I CK R +AK +LD M S+ P++ T+ LI+G+ K ++ ++
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M G ++ + + CQ G+ + A + ++ G P++ T +S++ L S
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 370 ISKVAEANELIGLMKK 385
++ +A ++ ++K
Sbjct: 299 KKELRKAFAILEDLQK 314
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 35/241 (14%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILA------------------------------- 206
+E + Y +I C+ GD+ S ++L+
Sbjct: 37 VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQ 96
Query: 207 ----EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
EM K I P+ + ++ F + ++ D ++L+ M + I V ++ I +L
Sbjct: 97 NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K + EA+ + ML RGI P TY +I GF K+ L AK++ SM + C PD
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F C+ + +++ +G V + T +L+ G + + A +L+ +
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 383 M 383
M
Sbjct: 277 M 277
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 92/217 (42%), Gaps = 8/217 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + +S + ++ + QLL ++ R PD+ ++++V G+ + A
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSAL-INALVKEGK---VSEA 165
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + +M + G+ + N+++ G + KR+ P+ T++ +I
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMAS-KSCSPDVVTFSTLIN 224
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C++ + I EM R+ I N + L+ GF + + +L +M G+A
Sbjct: 225 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAP 284
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ + SLC K +A A+L+ + + P +
Sbjct: 285 NYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRI 321
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 33/181 (18%)
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-------------------- 282
M + G V + + LC R +A AL+D M+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 283 -----------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
IK ++ Y +I K+G+ A+ LF M + G PD +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FPK 389
C+ G + A ++ R + + P T +L+ L KV+EA E+ G M +R FP
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 390 S 390
+
Sbjct: 181 T 181
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + + ++ A + + M V + L+ G +K + IF E + GI
Sbjct: 191 FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR-RGIVA 249
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TY +I FC+ GD + +L M + PN F +LA + + +L
Sbjct: 250 NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
Query: 241 QMMEKCGIASGVNVYNIRIQ 260
+ ++K + + +IQ
Sbjct: 310 EDLQKSEVCPRIVQAKFKIQ 329
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A+ +EM+ +G++ + + L+ G I ++ IF + K G
Sbjct: 435 INLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKS-G 493
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN ++++FC+ G+ I M+++ ++P+ F ++ GF +
Sbjct: 494 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRAL 553
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
L +M + G A V YN I L + + E A ++LD M GI PN TY ++ G+
Sbjct: 554 DTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGY 613
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G++ A + F + G + D Y + C+ G ++AL V R M+ +P
Sbjct: 614 AASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR-EMSFQKIPRN 672
Query: 358 STMKS-LVTGLASISKVAEANELIGLMKK 385
+ + + L+ G A V EA +L+ MK+
Sbjct: 673 TFIYNILIDGWARRGDVWEAADLMKQMKE 701
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 142/310 (45%), Gaps = 2/310 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI ++ + N + +L +E KT+ D N + + I + Q+ +D A +
Sbjct: 324 VTYSILIAGYGKTNDAESADKLFKEAKTKLD-NLNGIIYSNIIHAHCQSGNMDRAEELVR 382
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D ++++ G ++++ ++ +F K G P+ +Y +I + +
Sbjct: 383 EMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERL-KECGFRPSIISYGCLINLYVKI 441
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++ EM I+ N + +L+ GF H + + + + M K G+ +Y
Sbjct: 442 GKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 501
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N+ +++ CK+ + A + + M ++P+ T++ +I GF G+++ A M
Sbjct: 502 NLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRR 561
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + + L + + E A+ V G P+ T ++ G A+ + +
Sbjct: 562 SGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGK 621
Query: 376 ANELIGLMKK 385
A E +K+
Sbjct: 622 AFEYFTKIKE 631
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 136/331 (41%), Gaps = 6/331 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N F I + + L P DR +++ V + + + ++ E +K + ++ + R
Sbjct: 480 ANAFSIFEDMIKSGLQP----DRAIYNLLVEAFCKMGNMDRAIRIFERMK-KERMQPSNR 534
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I + A + A+ T + M + G +V NAL+ G I E + +
Sbjct: 535 TFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKM 594
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ GI PN TY +++ + SGD + +++ ++ + + LL K +
Sbjct: 595 -SIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 653
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ V + M I +YNI I + EA L+ M GI PN+ T+
Sbjct: 654 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTS 713
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
I+ K G+++ A+ + M + G +P+ F + + ALK + G
Sbjct: 714 YINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAG 773
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P + LVT L S + V E + G++
Sbjct: 774 LKPDEAAYHCLVTSLLSRATVMEGSTYTGIL 804
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 117/303 (38%), Gaps = 36/303 (11%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+V Y + HA TFE M G+ + +L+ ++++ E K G
Sbjct: 260 VVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM-KSEG 318
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+E TY+ +I + ++ D+ S + E + K N + ++ + +
Sbjct: 319 LEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAE 378
Query: 238 KVLQMMEKCGIASGVNVYN-----------------------------------IRIQSL 262
++++ ME+ GI + ++VY+ I
Sbjct: 379 ELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLY 438
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K+ + +A A+ M S GIK N TY LI+GF + A +F M G +PD
Sbjct: 439 VKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDR 498
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+ G + A+++ + P T + ++ G A + A + + L
Sbjct: 499 AIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDL 558
Query: 383 MKK 385
M++
Sbjct: 559 MRR 561
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 86/219 (39%), Gaps = 9/219 (4%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
++++ V F PK P+ + ++ + + GD + MR + I PNA
Sbjct: 236 EDWQAVVSAFERIPK-----PSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFV 290
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F L+ + ++ M+ G+ V Y+I I K +E A L
Sbjct: 291 FTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAK 350
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQGGE 337
++ N Y ++IH + GN++ A++L M G + D Y M Y + Q +
Sbjct: 351 TKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQ--D 408
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ L V G+ P + L+ I KV +A
Sbjct: 409 EKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKA 447
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 8/265 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNAL-------LLGCILSKNYEEVKRIFTEFPKVYGIE 179
+ A + F++M YGL SVD+ N L G ++ E V ++ E ++ G++
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEM-QIKGLK 220
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN VI C++G + +L EM + I P+ + L+ GF K ++
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 280
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M+K I+ Y I LC+ R EA L M+ + ++P+ TY LI G+ K
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG ++ A L M G P+ + LC+ GE +TA ++ KG + T
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400
Query: 360 MKSLVTGLASISKVAEANELIGLMK 384
SLV GL + +A +L+ M+
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDME 425
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 122/290 (42%), Gaps = 2/290 (0%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+ +L+EE++ + L+ N + I+L + + A + EM G+ L+
Sbjct: 207 VLKLIEEMQIK-GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLI 265
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G N R+F E K I P+ TY VI C++G + EM K +
Sbjct: 266 DGFCKLGNVSSAYRLFDEMQK-RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
P+ + L+ G+ KE K ++ + M + G+ + Y LCK + A
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M +G++ N+ TY L++G K GN++ A KL M G PD+ + C
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ E A ++ R + + P T L+ G + + +L+ M
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 6/339 (1%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
+L + S+ +R+ D ++P D + ++ + L Q +L E+ +
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISP----DFITYTAVICGLCQTGRVMEADKLFHEMVCKR- 323
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
L +E + I Y + + A +M + GL ++ AL G +
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+ E + G+E N TYN ++ C++G+ ++ +M P+A + L+
Sbjct: 384 ELLHEMCR-KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 442
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ K + ++L+ M + V +N+ + C E+ + LL ML +GI PN
Sbjct: 443 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 502
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
TY LI + N+ +++ M G PD + + C+ + A + R
Sbjct: 503 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 562
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ KG+ S+ +L+ G K EA EL M++
Sbjct: 563 DMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRR 601
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 16/325 (4%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERF 113
R+L +AP D + ++ + + + ++ +L +E++ R PD F
Sbjct: 244 RVLREMISEGIAP----DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD------F 293
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
++ V+ G Q + A + F EM L AL+ G +E + +
Sbjct: 294 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 353
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
++ G+ PN TY + C+ G+ + +L EM RK + N + L+ G K
Sbjct: 354 MLQM-GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAG 412
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ K+++ ME G Y + + CK + A LL ML R ++P + T+
Sbjct: 413 NIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFN 472
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L++GF G LE +KL M G P++ + C ++ R AK
Sbjct: 473 VLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAK 532
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G VP +T L+ G + EA
Sbjct: 533 GVVPDGNTYNILIKGHCKARNMKEA 557
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 6/286 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
+ ++ L + + ++LL E+ R L N + ++ ++ G +A ID A++
Sbjct: 364 VTYTALADGLCKCGEVDTANELLHEM-CRKGLELN--IYTYNSLVNGLCKAGNIDQAVKL 420
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M+ G L+ S+ + + ++P T+N ++ FC
Sbjct: 421 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD-RELQPTVVTFNVLMNGFC 479
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
SG +L M K I PNAT + L+ + + ++ + M G+ N
Sbjct: 480 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 539
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI I+ CK + +EA L M+ +G + +Y LI GF K A++LF M
Sbjct: 540 TYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQM 599
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G D + +F G+ E L++C ++ K V T
Sbjct: 600 RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 645
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +++ A + M GL+ S+ NA++ G Y K I E + G+ P
Sbjct: 11 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNI-GLSP 69
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN ++ C + S I EM R+ + P+ F L+A F + +
Sbjct: 70 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYF 129
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+K G+ +Y + + C+ EA + D ML +G ++ Y +++G KE
Sbjct: 130 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKE 189
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L A KLF M G PD Y F + CQ G AL + + P
Sbjct: 190 KMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAY 249
Query: 361 KSLVTGLASISKVAEANELIGLM--KKRFP 388
+L+ G + ++ +A+EL M +K FP
Sbjct: 250 NTLIDGFCKVGEMEKASELWDGMISRKIFP 279
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG---QANMIDHA 130
D ++FS ++ S+ H + ++K + N +++++++G NM++ A
Sbjct: 105 DLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNV---IYTVLMHGYCRNGNMLE-A 160
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ +EM + G V A N +L G K + ++F E + G P+ T+ +I
Sbjct: 161 LKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE-RGALPDFYTFTTLIH 219
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ G+ + S+ M +++I+P+ + L+ GF K + E ++ M I
Sbjct: 220 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 279
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I I + C + EA L D M+ +GIKP L T +I G+ + G+ A +
Sbjct: 280 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 339
Query: 311 ASMTNGGCEPD 321
M G PD
Sbjct: 340 GRMIAKGVAPD 350
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +I ++C G + I+ M K ++P+ + ++ G K+ +Y +L M
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G++ YN + C+ EAK + ML +G+ P+L ++ L+ F + +L
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A F M G PD+ + + + C+ G ALK+ + +G V ++
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ GL + +A++L M +R
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVER 205
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Query: 96 QLLEELKTRPD-LRQNERFHV--HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALN 150
+LE LK R + L Q V ++ +L G + M+ A + F+EM + G
Sbjct: 156 NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFT 215
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
L+ G N + +F + I+P+ YN +I FC+ G+ + M
Sbjct: 216 TLIHGHCQDGNMTKALSLFGTMTQ-RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 274
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+ I PN +G+L+ + + ++ +M + GI + N I+ C+ S +
Sbjct: 275 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 334
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIH 295
A L M+++G+ P+ +Y LI+
Sbjct: 335 ADEFLGRMIAKGVAPDHISYNTLIN 359
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++D A++ + + + + N +LL ++ V+R+F + P PN T+
Sbjct: 137 LLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-----PNVFTF 191
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI C+ G+ + S+ + M+ P+ F L+ G+ K + ++V ++++ M +
Sbjct: 192 NIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR 251
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + V YN I CK R E A M G+ N+ T+ + F KEG +
Sbjct: 252 SGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVRE 311
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A KLFA M G + + + C+ G + A+ + + +G + T LV
Sbjct: 312 AMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVD 371
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
GL KVAEA +++ +M+K ++ ++ L
Sbjct: 372 GLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 133/303 (43%), Gaps = 2/303 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + + + + QL+EE++ R + + + I + + ++ A
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMR-RSGCKADVVTYNALINCFCKFGRMETAYGY 280
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M + G+ +V + + E ++F + +V G+ N TY +I C
Sbjct: 281 FAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM-RVRGMALNEFTYTCLIDGTC 339
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G +L EM R+ + N + +L+ G KE K + VL+MMEK G+ +
Sbjct: 340 KAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANEL 399
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I K SE+A LL M ++G++ ++ Y LI G L+ AK L M
Sbjct: 400 LYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKM 459
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G EP+ + + G+ A+ + + + G+ P+ T +L+ GL +
Sbjct: 460 DESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSI 519
Query: 374 AEA 376
EA
Sbjct: 520 DEA 522
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 130/321 (40%), Gaps = 2/321 (0%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
PL+ + +++ V L + +L ++ + +R NE + I + + A+
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMME-KAGVRANELLYTTLIHGHFMNKNSEKAL 418
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
EM GL + AL+ G +E K + T+ + G+EPN Y ++ +
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE-SGLEPNYIIYTTMMDA 477
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+SG ++L ++ +PN + L+ G K ++ M G+
Sbjct: 478 CFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPN 537
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y + LCK EA L + M+ +G+ + Y L+ G+ K+GNL A L A
Sbjct: 538 VQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKA 597
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G + D +C+ F C A +V + G P + L++ +
Sbjct: 598 KMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657
Query: 372 KVAEANELIGLMKKRFPKSGD 392
+ EA L M++ P D
Sbjct: 658 NLEEAISLQDEMERVLPSCTD 678
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F M + G V N+L+ G +EV+++ E + G + + TYN +I
Sbjct: 207 ARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRR-SGCKADVVTYNALI 265
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ G + Y A M+R+ + N F + F KE + K+ M G+A
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I CK R ++A LLD M+ +G+ N+ TY L+ G KE + A+ +
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + + E AL + KG S +L+ GL +
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445
Query: 370 ISKVAEANELIGLMKK 385
+ K+ EA L+ M +
Sbjct: 446 VHKLDEAKSLLTKMDE 461
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I+PN Y+ +I C+ G S +++ EM+ K I PN + ++ GF ++
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++LQ M + I+ V YN I + K + EA L D ML RGI PN TY +I GF
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K+ L+ A+ +F M GC PD + F C + +++ +G V +
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428
Query: 358 STMKSLVTGLASISKVAEANEL 379
T +L+ G + + A +L
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDL 450
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 130/327 (39%), Gaps = 44/327 (13%)
Query: 104 RPDL---------RQNERFHVHSIVL----YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
RPDL R+ R ++S + + + + A+ TF ++ K GL V
Sbjct: 96 RPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFT 155
Query: 151 ALLLGCILSKNYEEVKRIFTEF--PKVY----------------------------GIEP 180
LL G L E +F + P V G++P
Sbjct: 156 TLLHGLCLDHRVSEALDLFHQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQP 215
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKV 239
+ TY + C+ GD+ S ++L +M S I+PN + ++ G K+ ++ D +
Sbjct: 216 DQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNL 275
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M+ GI + YN I C R A+ LL ML R I PN+ TY LI+ F K
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG A +L+ M G P++ + C+ + A + KG P T
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+L+ G ++ + EL+ M +R
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRR 422
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 1/244 (0%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
++ +V +A++ G + + +F E GI PN TYN +I FC SG S+
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQD-KGIFPNIVTYNCMIGGFCISGRWSAA 307
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+L EM + I PN + L+ F KE K+ + ++ M GI YN I
Sbjct: 308 QRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG 367
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
CK R + A+ + M ++G P++ T+ LI G+ ++ +L M G +
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVAN 427
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + + C G+ AL + + ++ G P T +L+ GL K+ +A E+
Sbjct: 428 TVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 487
Query: 382 LMKK 385
M+K
Sbjct: 488 AMQK 491
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 113/267 (42%), Gaps = 12/267 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ID M+ EM + GL + N L+ G L + + + G+ P
Sbjct: 403 YCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS-SGVCP 461
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRR-----------KSIRPNATDFGLLLAGFYK 229
+ T N ++ C++G + M++ + P+ + +L+ G
Sbjct: 462 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 521
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K+ + ++ + M GI Y+ I LCK R +EA + M S+ PN+ T
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 581
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI+G+ K G ++ +LF M G D+ + Y + G AL + + +
Sbjct: 582 FNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMI 641
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T+++++TG S ++ A
Sbjct: 642 SSGVYPDTITIRNMLTGFWSKEELERA 668
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 14/262 (5%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKV 188
A + +EM + + +V NAL+ + + E ++ E P+ GI PN+ TYN +
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR--GIIPNTITYNSM 364
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I FC+ + + M K P+ F L+ G+ + +D ++L M + G+
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I C + A L M+S G+ P++ T L+ G G L+ A +
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484
Query: 309 LFASMTNG-----------GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+F +M G EPD + + L G++ A ++ +G VP
Sbjct: 485 MFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDT 544
Query: 358 STMKSLVTGLASISKVAEANEL 379
T S++ GL S++ EA ++
Sbjct: 545 ITYSSMIDGLCKQSRLDEATQM 566
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 112/270 (41%), Gaps = 12/270 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + + +D A F M G V L+ G +K ++ + E P+ G+
Sbjct: 368 FCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR-RGLVA 426
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN +I FC GD ++ + +M + P+ LL G K +D ++
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486
Query: 241 QMMEKC-----------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ M+K G+ V YNI I L + EA+ L + M RGI P+ T
Sbjct: 487 KAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTIT 546
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y +I G K+ L+ A ++F SM + P+ F C+ G + L++
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+G V +L+ G + + A ++
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDI 636
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 4/183 (2%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I + + I I+
Sbjct: 67 DLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 126
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G+ P++ T+ L+HG + + A LF + C PD
Sbjct: 127 CSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDV 182
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + + G P T + V G+ + A L+
Sbjct: 183 LTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRK 242
Query: 383 MKK 385
M++
Sbjct: 243 MEE 245
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 12/165 (7%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L +G Y+ ED + M + V +N + ++ +++R + +L M +
Sbjct: 52 LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
I+ ++ ++ LI F L A F +T G PD F + LC AL
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171
Query: 343 ----KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
++CR P T +L+ GL +V EA L+ M
Sbjct: 172 DLFHQICR--------PDVLTFTTLMNGLCREGRVVEAVALLDRM 208
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 18/301 (5%)
Query: 91 FNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDA 148
+++++EE PD+ ++I++ G M I A + G V
Sbjct: 405 LQVMNEMVEE-GCHPDI------WTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 457
Query: 149 LNALLLGCI----LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
N L+ G L + V+R++T YGI P+ TYN V+ C++G + V
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWT-----YGIAPDVITYNSVLNGLCKAGKAKEVNET 512
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
EM K RPNA + +L+ F K ++ E+ V+ M + G+ +N I C+
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCR 572
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ A L + +G DT+ LI + + N++ A+K+F M + G +PD Y
Sbjct: 573 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 632
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + LC+ + A ++KG+VP +T ++ LA +V+EA +I +M
Sbjct: 633 YRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMV 692
Query: 385 K 385
+
Sbjct: 693 R 693
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 146/340 (42%), Gaps = 41/340 (12%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR--PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
A+ + +L A + + L ++ PD Q +V SI Y +A + A+ F
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQP--LYVASIQAYARAGRLRAAVDAF 94
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E MD + + A NA++ + + +++ +++ G+ P++ T+ +KSFC
Sbjct: 95 ERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA-GVAPDARTHTVRLKSFCL 153
Query: 195 SGDSSSVYSIL-----------------------------------AEMRRKSIRPNATD 219
+G +L EM + + P+
Sbjct: 154 TGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVAT 213
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L ++ + G +L + K G+++ NI I+ LC+ R EEA AL++ M
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG 273
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ + P++ TY L+ G K+ ++ A + M N GC PD + + C+ G +
Sbjct: 274 AY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A ++ + ++ KG+VP T SL+ GL + + A EL
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALEL 372
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A++ F E L+ + N+L+ G ++ E + G P+ TYN
Sbjct: 366 IERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE-EGCHPDIWTYN 424
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G+ S ++ + K P+ F L+ G+ K K + ++++ M
Sbjct: 425 IIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTY 484
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA V YN + LCK +++E + M+ +G +PN TY LI F K LE A
Sbjct: 485 GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 544
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M G PD+ F + C+ G+ + A + + KG+ T L+
Sbjct: 545 SGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 604
Query: 367 LASISKVAEANELIGLM 383
+S + A ++ G M
Sbjct: 605 YSSKLNMQMAEKIFGEM 621
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 1/229 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+Q E M YG+ V N++L G + +EV F E + G PN+ TYN
Sbjct: 471 LDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEM-ILKGCRPNAITYN 529
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I++FC+ ++ M + + P+A F L+ GF + + + Q +++
Sbjct: 530 ILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEK 589
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G ++ + +NI I + + A+ + M+S+G KP+L TY+ L+ G K N++ A
Sbjct: 590 GYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRA 649
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
A M + G P F L A+ + + G VP
Sbjct: 650 YAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +I C GD + E + K ++P+ + L+ G ++
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 404
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V+ M + G + YNI I LCK+ +A +++ + +G P++ T+ LI G
Sbjct: 405 LQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDG 464
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K L+ A +L M G PD + LC+ G+ + + + KG P+
Sbjct: 465 YCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 524
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T L+ I+++ EA+ +I
Sbjct: 525 AITYNILIENFCKINQLEEASGVI 548
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 2/252 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ E M Y + V N L+ G +E + G P+ TYN
Sbjct: 262 LEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN-QGCIPDDFTYN 319
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+SG +L + K P+ + L+ G E E ++ +
Sbjct: 320 TIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK 379
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + VYN ++ LC+ A +++ M+ G P++ TY +I+G K GN+ A
Sbjct: 380 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA 439
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G PD + F C+ + ++AL++ G P T S++ G
Sbjct: 440 AVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499
Query: 367 LASISKVAEANE 378
L K E NE
Sbjct: 500 LCKAGKAKEVNE 511
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ TYN +++ C+ L M + P+ + ++ G+ K ++
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++L+ G Y I LC E A L + ++ +KP+L Y L+ G
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++G + A ++ M GC PD + + + LC+ G A V ++ KG++P
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455
Query: 358 STMKSLVTGLASISKVAEANELIGLM 383
T +L+ G K+ A +L+ M
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERM 481
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 1/190 (0%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+TFEEM G R + N L+ EE + + G+ P++ ++N +I
Sbjct: 511 ETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQ-DGLVPDAVSFNTLIHG 569
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC +GD Y + ++ K A F +L+ + + + K+ M G
Sbjct: 570 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 629
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ Y I + LCK + A A L M+S+G P++ T+ +++ + A +
Sbjct: 630 LYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIH 689
Query: 312 SMTNGGCEPD 321
M G P+
Sbjct: 690 IMVRMGVVPE 699
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 36/234 (15%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y I+++ +G + M + P A + ++ ++ KV M
Sbjct: 74 YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133
Query: 245 KCGIASGVNVYNIRIQSLC---------KLKRS--------------------------E 269
G+A + +R++S C +L RS
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
A+ L D ML R + P++ T+ +++H ++G++ + L A + G + + ++
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC+ G E A+ + M P T +L+ GL SKV EA + +G M
Sbjct: 254 RGLCEDGRLEEAVALVE-RMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK-NYEEVKRIFTEFPKVYGIEPNSETY 185
+D A F+++D+ G + D N +L+G SK N + ++IF E G +P+ TY
Sbjct: 576 LDGAYLLFQKLDEKGYSATADTFN-ILIGAYSSKLNMQMAEKIFGEMIS-KGYKPDLYTY 633
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ C++ + Y+ LAEM K P+ FG +L H+ + ++ +M +
Sbjct: 634 RILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVR 693
Query: 246 CGIASGV 252
G+ V
Sbjct: 694 MGVVPEV 700
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 120/254 (47%), Gaps = 4/254 (1%)
Query: 134 FEEMDKYGLRQSVDALNALL-LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F K GL+ V N LL C ++ + V + P++ G+EP++ +Y+ V+KS
Sbjct: 142 FGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPEL-GVEPDTISYSTVLKSL 200
Query: 193 CESGDSSSVYSILAEMRRKS--IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
CE S +L M +KS PN + ++ GF++E + + M + G+
Sbjct: 201 CEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVP 260
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y+ I +LCK + ++A+ +L M+S G +P+ TY +IHG+ G + +F
Sbjct: 261 DVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMF 320
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
MT G PD + + LC+ G+ + A + + AKG P T L+ G A+
Sbjct: 321 REMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAE 380
Query: 371 SKVAEANELIGLMK 384
V + L M+
Sbjct: 381 GYVVDMLNLFNSME 394
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 110/262 (41%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + + + AM F +M GL+ N+L+ G + N + K + +E
Sbjct: 444 IAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGI 503
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
PN+ +N +I S C+ G I + RP+ F L+ G+ K E
Sbjct: 504 PRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAF 563
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
VL M GI V Y+ + C+ R ++ L MLS+G+KP TY ++HG
Sbjct: 564 GVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGL 623
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+G GAKK+ M G D + LC+ + A+ + + A +
Sbjct: 624 FNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNI 683
Query: 358 STMKSLVTGLASISKVAEANEL 379
+ + +++ + + K EANEL
Sbjct: 684 AIINTMIDAMYKVRKREEANEL 705
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 4/263 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A +M G N ++ G + ++E +F E + G+ P+
Sbjct: 274 KARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR-RGLMPDI 332
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T N + S C+ G S M K +P+ + +LL G+ E D+ +
Sbjct: 333 FTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS 392
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
ME GI + +VYNI I + K +EA + M RG+ P+ TY +I F + G
Sbjct: 393 MEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGR 452
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM-- 360
L A F M G +PD+ + C G A ++ M++G +P +T+
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRG-IPRPNTVFF 511
Query: 361 KSLVTGLASISKVAEANELIGLM 383
S++ L +V EA ++ L+
Sbjct: 512 NSIINSLCKEGRVVEAQDIFDLV 534
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 114/282 (40%), Gaps = 38/282 (13%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
+L+ E+ +R R N F I + + A F+ + G R V N+L+ G
Sbjct: 493 ELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDG 552
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
L E+ + V GIEP+ TY+ ++ +C +G + EM K ++P
Sbjct: 553 YGLVGKMEKAFGVLDAMISV-GIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKP 611
Query: 216 NATDFGLLLAGFYKE----------HKYEDVGKVLQMMEKCGIASG-------------- 251
+G++L G + + H+ + G + + CGI G
Sbjct: 612 TTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI-STCGIILGGLCRNNCDDEAIAL 670
Query: 252 ------------VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ + N I ++ K+++ EEA L D + + G+ PN TY +I K
Sbjct: 671 FKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLK 730
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
EG++E A +F+ M GC P S L + GE A
Sbjct: 731 EGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKA 772
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 111/246 (45%), Gaps = 5/246 (2%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G +V + N ++ G + +F E + G+ P+ TY+ I + C++
Sbjct: 222 GCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQ-QGVVPDVVTYSSYIDALCKARAMDK 280
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+L +M P+ + ++ G+ ++++ + + M + G+ + N +
Sbjct: 281 AELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMS 340
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
SLCK +S+EA D M ++G KP+L TY L+HG+ EG + LF SM G
Sbjct: 341 SLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVA 400
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA---- 376
D + + + G + A+ + +G +P T +++ + + ++A+A
Sbjct: 401 DHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKF 460
Query: 377 NELIGL 382
N++I +
Sbjct: 461 NQMIAM 466
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 10/348 (2%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK 102
+ I LKSE NP L I + P F + +L +S+++E ++
Sbjct: 11 KRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIR 70
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK-YGLRQSVDALNALLLGCILSKN 161
T+ + E + I Y + +M D A+ F+ M + +G + + + N+LL I S
Sbjct: 71 TQ-KCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNK 129
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
++E + F F + G+ PN +TYN +IK C +L M + P+ +G
Sbjct: 130 WDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYG 188
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK----LKRSEEAKALLDG 277
L+ K D K+ M + G+ V YNI I K L SE + LL G
Sbjct: 189 TLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 248
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
+ PN+ +Y +I+G K G + + +++ M D Y + + LC G
Sbjct: 249 ---PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ A +V + G P +++ G ++ E EL +M+K
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 144/318 (45%), Gaps = 13/318 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMID 128
D +S + L + + + +++ +E+ PD+ V++ +L G +A I+
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV------VYNTMLNGYLRAGRIE 342
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
++ ++ M+K G R +V + N L+ G + +E I+ P+ +S TY +
Sbjct: 343 ECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPE-KDCCADSMTYGVL 400
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C++G + SIL E + + ++ G +E + ++V VL M K G
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+V N I + + E+A M+S+G P + TY LI+G K A
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M + G +P+ + + LCQG + + AL + ++ KG+ P ++ GL
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580
Query: 369 SISKVAEANELIGLMKKR 386
S KV +A +L MK+R
Sbjct: 581 SSGKVEDALQLYSEMKQR 598
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 8/294 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT-RPDLRQNERFHVHSIVL-YGQANMIDHAM 131
D M + + V L + + N +LEE + R DL + F S++ + +D
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL---DTFAYSSMINGLCREGRLDEVA 449
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
++M K+G + + NA++ G + + E+ R F G P TYN +I
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS-KGCFPTVVTYNTLING 508
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE-DVGKVLQMMEKCGIAS 250
++ S Y+++ EM K +PN + LL+ G + K + + Q +EK G
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKP 567
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V ++NI I LC + E+A L M R PNL T+ L+ GF K + E A K++
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW 627
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+ G +PD + + LC A+ ++ +G +P T LV
Sbjct: 628 DHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 39/267 (14%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
LD A+S ++ L + + ++ +L+++ T+ + N HV + V+ G +A+ ++ A
Sbjct: 427 LDTFAYSSMINGLCREGRLDEVAGVLDQM-TKHGCKPNP--HVCNAVINGFVRASKLEDA 483
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF------PKVY-------- 176
++ F M G +V N L+ G ++ + E + E P +
Sbjct: 484 LRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNG 543
Query: 177 --------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
G +P+ + +N +I C SG + +EM+++ PN
Sbjct: 544 LCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPN 603
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
L+ GFYK +E K+ + + G + YNI ++ LC R +A L+
Sbjct: 604 LVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLN 663
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ RG+ P T+ L+ G L
Sbjct: 664 DAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 116/296 (39%), Gaps = 38/296 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F+EM + G+ V N L+ G + I+ K + PN +YN +I
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262
Query: 190 KSFC------------------ESGDSSSVYSIL-----------------AEMRRKSIR 214
C E G YS L EM +
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ + +L G+ + + E+ ++ ++MEK G + V+ YNI I+ L + + +EA ++
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISI 381
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ + + + TY L+HG K G L A + NG + D++ + LC+
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 441
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM--KKRFP 388
G + V G P+ +++ G SK+ +A G M K FP
Sbjct: 442 EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
>gi|115465257|ref|NP_001056228.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|113579779|dbj|BAF18142.1| Os05g0548600 [Oryza sativa Japonica Group]
gi|222632454|gb|EEE64586.1| hypothetical protein OsJ_19438 [Oryza sativa Japonica Group]
Length = 440
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 138/330 (41%), Gaps = 6/330 (1%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN-MIDH 129
+PL F+ + L A+ +A + +T P + HS++ +N D
Sbjct: 91 APLRPTVFAAVIDHLGAASRPDAAVGVF---RTVPAFCSHSAATFHSLLNALVSNGRTDA 147
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A K G+R + + N +L G L + + + E G+ P T+N ++
Sbjct: 148 ARDMLPLAPKLGVRLNAVSYNIILKGACLRDGFMGARGVLDEMLS-RGVRPTVVTFNTLV 206
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C G+ + ++ EM R+ + PNA + LL+ G ++ D K++ ME G
Sbjct: 207 GSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLMFDMEYRGCQ 266
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ V Y + + S + ++ + LL M R +KP+ +Y LI G + A +
Sbjct: 267 ADVVNYGVLMSSRARHGDADGVRELLSAMRKRKLKPDDASYNILIRCLCDAGRADEAHRA 326
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P + + + C+ +++ L+V A MA G P T + L GL
Sbjct: 327 LLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCPQARTFRHLARGLGE 386
Query: 370 ISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
K EA ++ M +R D W A +
Sbjct: 387 DGKAEEAFFVLEQMARREMSLDADGWQAVV 416
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 6/303 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
S+ +++D+ P D ++ ++ LS+ + ++ ++ R L
Sbjct: 317 SHALKVMDLMLQEGHDP----DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 372
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
F+ + L Q N ++ A+ E+ GL V N L+ + R+F E
Sbjct: 373 FNTLIVALCSQ-NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM 431
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K G P+ TYN +I C G + +L EM + + ++ K+ +
Sbjct: 432 -KSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E+ +V M+ GI+ +N I LCK KR ++A L++ M+ G++P+ TY
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
++ + K+G+L+ A + +MT G E D + LC+ G + ALK+ R KG
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610
Query: 353 WVP 355
P
Sbjct: 611 IRP 613
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 157/349 (44%), Gaps = 8/349 (2%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
I L S++ LD+ ++ SP D F+I ++ L + + +L EE+K+
Sbjct: 377 IVALCSQNRLEEALDLARELTVKGLSP-DVYTFNILINALCKVGDPHLGIRLFEEMKSSG 435
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
+++ L +++ A+ +EM+ G +S N ++ EE
Sbjct: 436 CAPDEVTYNILIDHLCSMGKLVN-ALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEA 494
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ +F + +GI ++ T+N +I C++ ++ +M ++ ++P+ + +L
Sbjct: 495 EEVFDQM-DAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILT 553
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
+ K+ + +L+ M G V Y I LCK R++ A LL GM +GI+P
Sbjct: 554 HYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP 613
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ-GGEYETALKV 344
Y +I + NL A LF MT G PD+ + + LC+ GG + A
Sbjct: 614 TPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDF 673
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISK---VAEANELIGLMKKRFPKS 390
+ KG++P FS+ + L GL ++ + A ELI + K +F +S
Sbjct: 674 LVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELI-IEKAKFRES 721
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 153/344 (44%), Gaps = 6/344 (1%)
Query: 38 IKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQL 97
I ++ R A L+ +++P L + A + R + + KL A F+ + L
Sbjct: 53 ISDQDRLLTA-LREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGL 111
Query: 98 LEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQTFE-EMDKYGLRQSVDALNALLLG 155
+ E+ R + + V S V Y + D A+ +++ +G++ N LL
Sbjct: 112 VREM--RREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNV 169
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+ ++ ++ E GI+P+ T N +IK+ C + + +L EM ++ P
Sbjct: 170 LAEGSRMKLLESVYNEMTD-RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAP 228
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ T F L+ GF +E E +V M + G + N+ I CK+ R E+A +
Sbjct: 229 DETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYI 288
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
++ G +P+ TY +H + G++ A K+ M G +PD + + L +
Sbjct: 289 QKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKN 348
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
GE + A + + +G +P +T +L+ L S +++ EA +L
Sbjct: 349 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 129/315 (40%), Gaps = 10/315 (3%)
Query: 74 DRMAFSIAVSKLSQANHFN---AISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDH 129
D++ ++ V L Q H + + L+ + PD+ F ++++ + +D
Sbjct: 299 DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDV-----FTYNTVINCLSKNGELDE 353
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A +M G N L++ EE + E V G+ P+ T+N +I
Sbjct: 354 AKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL-TVKGLSPDVYTFNILI 412
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ GD + EM+ P+ + +L+ K + +L+ ME G
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCP 472
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I +LCK R EEA+ + D M + GI + T+ LI G K ++ A +L
Sbjct: 473 RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATEL 532
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G +P + + C+ G+ + A + A G+ T +L+ GL
Sbjct: 533 IEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCK 592
Query: 370 ISKVAEANELIGLMK 384
+ A +L+ M+
Sbjct: 593 AGRTQVALKLLRGMR 607
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 132/311 (42%), Gaps = 4/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + + + L +A+ +LEE+ + + +E + + + I+ A++
Sbjct: 194 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA-VAPDETTFTTLMQGFIEEGSIEAALRV 252
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+M + G + +N L+ G C + + + + I E G EP+ TYN +
Sbjct: 253 KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD--GFEPDQVTYNTFVHCL 310
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++G S ++ M ++ P+ + ++ K + ++ ++ M G
Sbjct: 311 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 370
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I +LC R EEA L + +G+ P++ T+ LI+ K G+ +LF
Sbjct: 371 TTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 430
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + GC PD + + LC G+ AL + + + G T +++ L +
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490
Query: 373 VAEANELIGLM 383
+ EA E+ M
Sbjct: 491 IEEAEEVFDQM 501
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 2/277 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ + A+ EEM + + L+ G I + E R+ T+ + G P
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMET-GCSPTR 265
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T N +I +C+ G + + P+ + + + KV+ +
Sbjct: 266 VTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDL 325
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G V YN I L K +EAK +++ M+ RG P+ T+ LI +
Sbjct: 326 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNR 385
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
LE A L +T G PD Y F + LC+ G+ +++ + G P T
Sbjct: 386 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNI 445
Query: 363 LVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
L+ L S+ K+ A +L+ M+ P+S +N +
Sbjct: 446 LIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTII 482
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TYN VI ++G+ I+ +M + P+ T F L+ +++ E+
Sbjct: 330 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + + G++ V +NI I +LCK+ L + M S G P+ TY LI
Sbjct: 390 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDH 449
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G L A L M + GC + + LC+ E A +V A G
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRS 509
Query: 357 FSTMKSLVTGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
T +L+ GL ++ +A ELI ++K+ S +N+ L
Sbjct: 510 AVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSIL 552
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 110/291 (37%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
Q+L R D + + I G A D EM + G + + +
Sbjct: 74 QMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVES 133
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+ +++ + +G++ ++ YN ++ E + S+ EM + I+P
Sbjct: 134 YARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQP 193
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ L+ + H+ +L+ M +A + +Q + E A +
Sbjct: 194 DVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVK 253
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M+ G P T LI+G+ K G +E A G EPD + F + LCQ
Sbjct: 254 TKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQN 313
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G ALKV + +G P T +++ L+ ++ EA ++ M R
Sbjct: 314 GHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR 364
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 128/299 (42%), Gaps = 29/299 (9%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
V I G A + A FEE+ + GL A NALL G + + + ++ + I +E +
Sbjct: 366 VAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER 425
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G P+ TY+ +I ++ +G S +L EM +RPN+ F +LA + K++
Sbjct: 426 S-GFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQ 484
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+VL+ M G++ + YN+ I + K + A A D M G++P+ T+ LI
Sbjct: 485 KSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLI 544
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-FMFTYF----------------LCQG-- 335
K G+ A++LF +M GC P + + M F QG
Sbjct: 545 DCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLL 604
Query: 336 ---------GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G E A+ R A G P + SL+ + AEA ++ MK+
Sbjct: 605 ANVVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKE 663
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 139/317 (43%), Gaps = 4/317 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNA--ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
P D + +S + L++ N ++ + ++ E+++ + + + IV + ++ ++
Sbjct: 287 PSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESD-KIELDGQLLNDIIVGFAKSGDVNR 345
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AM + GL L A++ + EE + IF E K G+ P + YN ++
Sbjct: 346 AMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEEL-KEGGLMPRTRAYNALL 404
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K + ++G SI++EM R P+ + LL+ + ++E VL+ ME G+
Sbjct: 405 KGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVR 464
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V++ + S + +++ +L M + G+ P+ Y +I FGK L+ A
Sbjct: 465 PNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALAT 524
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M G +PD+ + C+ G + A ++ A G P +T ++
Sbjct: 525 FDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGE 584
Query: 370 ISKVAEANELIGLMKKR 386
+ + L+G M+ +
Sbjct: 585 QERWEDVKTLLGKMQSQ 601
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 9/226 (3%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
Q+L E++ + + F+ I +G+ N +DHA+ TF+ M G++ N L+
Sbjct: 488 QVLREMRNS-GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDC 546
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
S ++ + + +F E + G P + TYN +I SF E V ++L +M+ + +
Sbjct: 547 HCKSGHHNKAEELF-EAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLA 605
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N + L E ++M G+ V V N I + + +R EA ++L
Sbjct: 606 NVVTYTTLGLS-------EQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVL 658
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
M +KP++ TY L+ + + ++ MT GC PD
Sbjct: 659 QYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPD 704
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 80/210 (38%), Gaps = 37/210 (17%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKS---------------IRPNATDFGLL----- 223
TYN +I + + D ++++ MRR R N +D +L
Sbjct: 257 TYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYA 316
Query: 224 -----------------LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+ GF K L M++ G++ I +L
Sbjct: 317 EIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAG 376
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R+EEA+A+ + + G+ P Y L+ G+ K G+L+ A+ + + M G PD + +
Sbjct: 377 RTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYS 436
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ G +E+A V + A G P+
Sbjct: 437 LLIDAYANAGRWESARIVLKEMEASGVRPN 466
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ++ A E M G+ V N+L+ G + + R + K G+EP
Sbjct: 184 YCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAG-LCRAGEVDAARDMVDTMKRDGVEP 242
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY I +C +S+ EM RK + P+ L+ G K+ ++ + +
Sbjct: 243 NVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ MEK G A Y + I +L K +R E+ +LL ++SRG+ +L Y L+ KE
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G ++ AK +F + P+ + + LC+ G + A +V K P+ T
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
S++ GL V +A + + MK+R
Sbjct: 423 SSIINGLVKRGWVGKATDYMREMKER 448
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 2/231 (0%)
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
C+L K+ E F E + G++P+ TYN +I + G ++ +L M+R SI+P
Sbjct: 570 CMLGKSKE--AESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKP 627
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N + L+ G ++ E +L M G + + +Q+ + +RS+ +
Sbjct: 628 NLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIH 687
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
+ M++ G+ ++ Y L+ G A + M+ G PD+ F +
Sbjct: 688 EWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKS 747
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G + A + G P+ +T +L+ GL S ++ E++ ++ MKKR
Sbjct: 748 GHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKR 798
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 131/330 (39%), Gaps = 37/330 (11%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+D + ++ V+ L +A +A +++ +K R + N + IV Y + N +D A
Sbjct: 207 VDVVGYNSLVAGLCRAGEVDAARDMVDTMK-RDGVEPNVVTYTMFIVEYCRRNAVDDAFS 265
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+EEM + G+ V L+AL+ G + E +F E K+ G PN TY +I +
Sbjct: 266 LYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKI-GAAPNHVTYCMLIDTL 324
Query: 193 CESGDSSSVYSILAEMRRKSI-----------------------------------RPNA 217
++ + S+L E+ + + PN
Sbjct: 325 AKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNG 384
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ +L+ K + +VL ME+ I+ V ++ I L K +A +
Sbjct: 385 VTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMRE 444
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M RGI PN+ TY +I G K E A ++ M G E + + L + G+
Sbjct: 445 MKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGK 504
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGL 367
E A + R +G + +L+ GL
Sbjct: 505 IEKAEALFREMNERGVLLDHVNYTTLIDGL 534
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P++ T+N +I +SG + +S +M I PN F LL G + +
Sbjct: 729 GIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGES 788
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
VL M+K GI Y+I + K EA L M+ +G P + TY LI
Sbjct: 789 DMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISD 848
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF---LCQGGEYETALKVCRASMAKGW 353
F K G + AK+LF M N G P S + + L G E LK + KG+
Sbjct: 849 FSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMK---EKGF 905
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI 380
P T+ S+ + EA L+
Sbjct: 906 SPSKGTLSSISRAFSKPGMSWEARRLL 932
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 82/205 (40%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY +I + C++G+ +L+EM KSI PN F ++ G K
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++ M++ GI V Y I K E A + ML G++ N L++G K
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G +E A+ LF M G D + L + G A KV + K +P
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561
Query: 360 MKSLVTGLASISKVAEANELIGLMK 384
+ L + K EA + M+
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQ 586
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 118/282 (41%), Gaps = 6/282 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHAMQT 133
+ +++ + L +A + + Q+L E++ + F ++ +V G + A
Sbjct: 385 VTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGW---VGKATDY 441
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM + G+ +V ++ G E ++ E G+E N + ++
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM-LCEGVEVNKFIVDSLVNGLK 500
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G ++ EM + + + ++ L+ G +K KV Q + + +
Sbjct: 501 KNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAV 560
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VYN+ I LC L +S+EA++ L+ M S G+KP+ TY +I +EG A KL M
Sbjct: 561 VYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+P+ + L + G E A + + G+ P
Sbjct: 621 KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSP 662
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 120/279 (43%), Gaps = 8/279 (2%)
Query: 107 LRQNERFHV--HSIVLYG---QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
LR +E +++V+ G Q + A+ EM K G+ +N +L+G
Sbjct: 95 LRSSESVDTVSYNVVMSGFSEQGGLAPEAL--LAEMCKRGVPFDAVTVNTVLVGLCRDGR 152
Query: 162 YEEVKRIFTEFPKVYGIEP-NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+ + + GI + +N ++ +C+ GD + +++ M+ + + + +
Sbjct: 153 VDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGY 212
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+AG + + + ++ M++ G+ V Y + I C+ ++A +L + M+
Sbjct: 213 NSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVR 272
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G+ P++ T L+ G K+G A LF M G P+ + M L +
Sbjct: 273 KGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNE 332
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+L + +++G V +L+ L K+ EA ++
Sbjct: 333 SLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDM 371
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 2/217 (0%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
+LEE+ R F+ I+ + ++ +D+A T+++M +G+ +V N LL G
Sbjct: 721 VLEEMSGRGIAPDTITFNAL-ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGL 779
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+ E + E K GIEP++ TY+ ++ + + + + EM K P
Sbjct: 780 ESAGRIGESDMVLNEMKK-RGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPK 838
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ + L++ F K ++ M+ G+ Y+I + KL+ E + L
Sbjct: 839 VSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLK 898
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
M +G P+ T + F K G A++L ++
Sbjct: 899 DMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 4/213 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD---FGLLLAGFYKEHKY 233
G+ ++ T N V+ C G + LAE+ + D + L+ G+ K
Sbjct: 132 GVPFDAVTVNTVLVGLCRDGRVDRA-AALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDM 190
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E V + M+ G+ V YN + LC+ + A+ ++D M G++PN+ TY
Sbjct: 191 ETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMF 250
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I + + ++ A L+ M G PD LC+ G + A + R G
Sbjct: 251 IVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGA 310
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T L+ LA + E+ L+G + R
Sbjct: 311 APNHVTYCMLIDTLAKAQRGNESLSLLGEVVSR 343
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG--CEPDSYCFFMFT 329
+ALL M RG+ + T ++ G ++G ++ A L M GG D +
Sbjct: 122 EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLV 181
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ G+ ETA V A+G SLV GL +V A +++ MK+
Sbjct: 182 DGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKR 237
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 1/232 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A ++D+A + F +M G+ ++ N L+ G ++ +++ + G++P
Sbjct: 439 FCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLE-NGLKP 497
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ T++ ++ C+ + EM I PNA + +L+ K+L
Sbjct: 498 DIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLL 557
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+K GI+ YN IQ C++ + E+AK L D M G+ P+ TY I +
Sbjct: 558 RRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSES 617
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
G LE AKK+F SM GC PDSY + L Q E A + KG
Sbjct: 618 GRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKG 669
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 94/207 (45%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+V G+ PN T+N +I C+ G +L + ++P+ F ++ G + +
Sbjct: 456 QVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRT 515
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E+ + M + GI +YNI I+SLC + + LL M GI P+ +Y L
Sbjct: 516 EEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNAL 575
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I F + +E AKKLF SM+ G PD+Y + F L + G E A K+ + A G
Sbjct: 576 IQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGC 635
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI 380
P ++ L V EA +I
Sbjct: 636 SPDSYICNLIIKILVQQEYVEEAQNII 662
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 5/254 (1%)
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
FE + K G++ + A AL+ +L KN EE R++ + G+ N +YN +I
Sbjct: 381 VFEILRKQGVKAGIGAYLALIE--VLYKNEWREEGDRVYGQLIS-DGLISNVFSYNMIIN 437
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + + +M+ + + PN F L+ G K+ + K+L+ + + G+
Sbjct: 438 CFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKP 497
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ ++ + LC++KR+EEA M+ GI PN Y LI G++ + KL
Sbjct: 498 DIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLL 557
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G PD+Y + C+ + E A K+ + G P T + + L+
Sbjct: 558 RRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSES 617
Query: 371 SKVAEANELIGLMK 384
++ EA ++ M+
Sbjct: 618 GRLEEAKKMFYSME 631
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P + +N V+ + + + +R++ ++ + L+ YK E+
Sbjct: 354 GYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEG 413
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V + G+ S V YN+ I C+ K + A M RG+ PNL T+ LI+G
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLING 473
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K+G ++ A+KL S+ G +PD + F LCQ E AL+ + G P+
Sbjct: 474 HCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPN 533
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
L+ L +I VA + +L+ M+K
Sbjct: 534 AVIYNILIRSLCTIGDVARSVKLLRRMQK 562
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 111/269 (41%), Gaps = 10/269 (3%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALL--LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
++ E+ G R + D L ALL G + NY +F + G+ P + YN
Sbjct: 128 SVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYS--AHVFCQI-SFLGLSPTTRLYNA 184
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I + +S Y +M + + + L+ G K ++ ++++ M+ G
Sbjct: 185 LIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKG 244
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V Y + I+ C R +EA + + M G+ PN T + L+HG + + A
Sbjct: 245 HFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKAL 304
Query: 308 KLFASMTNGGCEPDSYCFFM----FTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKS 362
+L + + E + F + Y L + + R + + G+ P S
Sbjct: 305 ELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNV 364
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSG 391
++ L +++ E ++ +++K+ K+G
Sbjct: 365 VMACLVKGAELRETCDVFEILRKQGVKAG 393
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 109/298 (36%), Gaps = 41/298 (13%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
++N ID A F++M N L+ G +E R+ + K G PN
Sbjct: 191 KSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQM-KDKGHFPNV 249
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK------------- 229
TY +I+ FC + + + M+ + PN L+ G ++
Sbjct: 250 FTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSE 309
Query: 230 ----EHKYEDVGKVL-----------------------QMMEKCGIASGVNVYNIRIQSL 262
E + E V +L +++ + G G +V+N+ + L
Sbjct: 310 FLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACL 369
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K E + + + +G+K + Y LI K E +++ + + G +
Sbjct: 370 VKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNV 429
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + M C+ + A + R +G VP+ T +L+ G + +A +L+
Sbjct: 430 FSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLL 487
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 13/173 (7%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CIL---SKNYEEVKRIFTEFPKVYGI 178
Q + A++ F EM ++G+ + N L+ C + +++ + ++R+ E GI
Sbjct: 511 QIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKE-----GI 565
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P++ +YN +I+ FC + M R + P+ + + + + E+ K
Sbjct: 566 SPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKK 625
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK----PNL 287
+ ME G + + N+ I+ L + + EEA+ +++ +GI PNL
Sbjct: 626 MFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLNSIPNL 678
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 11/295 (3%)
Query: 105 PDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
PDL F S+VL Y + + ++ A F M + R +V N + C K +E
Sbjct: 222 PDL-----FTYTSLVLGYCRNDDVERACGVFCVMPR---RNAVSYTNLIHGLCEAGKLHE 273
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
++ F + G P TY ++ + CESG S+ EMR + PN + +L
Sbjct: 274 ALE--FWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVL 331
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ KE + ++ K+L M + G+A V +N I S CK E+A +L M S+ +
Sbjct: 332 IDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKV 391
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
PN+ TY LI GF + +++ A L M PD + + LC+ G ++A +
Sbjct: 392 CPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASR 451
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ R + G+ P T + + L + +V EA++++ +K++ K+ + AL
Sbjct: 452 LFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTAL 506
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 117/276 (42%), Gaps = 1/276 (0%)
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
R+N + + I +A + A++ + M + G +V L+ S E
Sbjct: 252 RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALS 311
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F E + G EPN TY +I C+ G +L EM K + P+ F L+ +
Sbjct: 312 LFGEM-RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSY 370
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K ED VL +ME + V YN I C+ K + A ALL+ M+ + P++
Sbjct: 371 CKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDV 430
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LIHG + G ++ A +LF M G PD + F F LC+ G A ++ +
Sbjct: 431 VTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILES 490
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
K + +L+ G K+ A L M
Sbjct: 491 LKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM 526
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 5/283 (1%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
E K PD+ +H + + ++D A + F M + G NA ++
Sbjct: 423 ESKLSPDVVTYNTL-IHGLC---EVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRM 478
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
E +I + + ++ N Y +I +C++G S+ M + PN+
Sbjct: 479 GRVGEAHQILESLKEKH-VKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSIT 537
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +++ G KE K +D +++ M K + ++ YNI ++ + K + A +L+ ++
Sbjct: 538 FNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLI 597
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
S G +PN+ TY I + +G LE A+++ + N G DS+ + + G +
Sbjct: 598 SSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLD 657
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+A V R G P + T L+ L E + +GL
Sbjct: 658 SAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGL 700
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 3/255 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A++ EM + G+ SV NAL+ G + E + + PN TYN
Sbjct: 341 MDEALKMLNEMVEKGVAPSVVPFNALI-GSYCKRGMMEDAVGVLGLMESKKVCPNVRTYN 399
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++I FC ++L +M + P+ + L+ G + + ++ ++M +
Sbjct: 400 ELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRD 459
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + +N + LC++ R EA +L+ + + +K N Y LI G+ K G +E A
Sbjct: 460 GFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHA 519
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-PHFSTMKSLVT 365
LF M C P+S F + L + G+ + A+ + MAK V P T LV
Sbjct: 520 ASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVE-DMAKFDVKPTLHTYNILVE 578
Query: 366 GLASISKVAEANELI 380
+ ANE++
Sbjct: 579 EVLKEYDFDRANEIL 593
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F EM + G +V L+ +E ++ E + G+ P+ +N +I
Sbjct: 309 ALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVE-KGVAPSVVPFNALI 367
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S+C+ G +L M K + PN + L+ GF + + +L M + ++
Sbjct: 368 GSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLS 427
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I LC++ + A L M+ G P+ T+ + + G + A ++
Sbjct: 428 PDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQI 487
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
S+ + + + + C+ G+ E A + + +A+ +P+ T ++ GL
Sbjct: 488 LESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRK 547
Query: 370 ISKVAEANELIGLMKK 385
KV +A L+ M K
Sbjct: 548 EGKVQDAMLLVEDMAK 563
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 4/207 (1%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN T N ++ S+C+ G+ + + R P+ + L+ G+ + E V
Sbjct: 187 PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGV 246
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+M + S N+ I LC+ + EA M G P + TY L+ +
Sbjct: 247 FCVMPRRNAVSYTNL----IHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCE 302
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G A LF M GCEP+ Y + + +LC+ G + ALK+ + KG P
Sbjct: 303 SGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVP 362
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+L+ + +A ++GLM+ +
Sbjct: 363 FNALIGSYCKRGMMEDAVGVLGLMESK 389
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 2/153 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN TY+K+I C+ G + +S+ MR I P+ LL+ K + +
Sbjct: 734 GCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEA 793
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L M +C + + Y + I L + E+A+A+ +L G + +K LI G
Sbjct: 794 VTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDG 853
Query: 297 FGKEGNLEGAKKLFASMTNGGC--EPDSYCFFM 327
K G ++ +L M GC P++Y M
Sbjct: 854 LAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 113/323 (34%), Gaps = 65/323 (20%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ AM E+M K+ ++ ++ N L+ + +++ I G +PN TY
Sbjct: 551 VQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISS-GYQPNVVTYT 609
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
IK++C G ++ +++ + + ++ + LL+ + + VL+ M
Sbjct: 610 AFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT 669
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAK-----------------------------ALLDG 277
G Y+I ++ L K +E L +
Sbjct: 670 GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEK 729
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M G PNL+TY LI+G K G L A L+ M GG P C+ G
Sbjct: 730 MAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGM 789
Query: 338 YETALKVCRASMAKGWVPHFST-----------------------------------MKS 362
+ A+ + + M + H + K
Sbjct: 790 FGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKV 849
Query: 363 LVTGLASISKVAEANELIGLMKK 385
L+ GLA V + +EL+ LM+K
Sbjct: 850 LIDGLAKTGYVDQCSELLNLMEK 872
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 128/342 (37%), Gaps = 32/342 (9%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D+ F+ + L + Q+LE LK + ++ NE + I Y +A I+HA
Sbjct: 462 SP-DQWTFNAFMVCLCRMGRVGEAHQILESLKEK-HVKANEHAYTALIDGYCKAGKIEHA 519
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F+ M + N ++ G ++ + + K + ++P TYN +++
Sbjct: 520 ASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAK-FDVKPTLHTYNILVE 578
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ D IL + +PN + + + + + E+ +++ ++ G+
Sbjct: 579 EVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLL 638
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY----KHL-IHGFGKEG---- 301
+YN+ I + + + A +L M G +P+ TY KHL I KEG
Sbjct: 639 DSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPV 698
Query: 302 ------------NLEGAKK--------LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
N + K LF M GC P+ + LC+ G A
Sbjct: 699 GLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVA 758
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ G P SL++ + EA L+ M
Sbjct: 759 FSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM 800
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 7/269 (2%)
Query: 115 VHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+SI++ Y + + ++ A + F +M + + N L+ G + E+ ++F E
Sbjct: 245 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 304
Query: 173 PKVYGIEPNSETYNKVIKSFCES-GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K+ G + TYN +I S C+ G + + ++ + P + L+ GF
Sbjct: 305 EKI-GCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDAR 363
Query: 232 KYEDVGKVLQMME-KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+ + + ME KC A V Y+I I LCK++R +EA L+ M + G P + TY
Sbjct: 364 RLSEAMQYFDEMEGKC--APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTY 421
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI+GF K G L+ A F M GC P++ F LC+ L++ A
Sbjct: 422 GGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHA 481
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANEL 379
+G P T L++GL S ++V +A L
Sbjct: 482 EGCKPDVITYNCLISGLCSANRVEDAQRL 510
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 124/296 (41%), Gaps = 19/296 (6%)
Query: 88 ANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMID-HAMQTFEEMDKYGLR 143
AN + +E+K PDL E +H+ L M + HA+ F M
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDL---ESYHILLSALSDSGRMAEAHAL--FSAMT---CS 205
Query: 144 QSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+ N L+ G C + + YE + + E K G EPN TY+ +I +C+ +
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYE-AQSLMKEILKA-GYEPNVFTYSIIINCYCKLDKVEEAW 263
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ +M + PNA F L+AGF K ED K+ MEK G + + YN I SL
Sbjct: 264 EVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSL 323
Query: 263 CKLKRSE--EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
CK KR A L + + G+ P + TY LI GF L A + F M G C P
Sbjct: 324 CK-KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAP 381
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ + + LC+ + A K A G+ P T L+ G ++ A
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSA 437
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 8/256 (3%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A++ F+E+ + N L+ G + +F++ K G+ PN+ T N
Sbjct: 14 DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-KSSGLLPNASTMNT 72
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ CE G SS + EM+ P + +LL GF+ + D LQ M K
Sbjct: 73 LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSS 132
Query: 248 IASGVNVYNIRIQSLC----KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ YN+ ++ LC R E+A M + G++P+L++Y L+ G +
Sbjct: 133 SSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRM 192
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A LF++MT C PD + + C+ G+ A + + + G+ P+ T +
Sbjct: 193 AEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSII 249
Query: 364 VTGLASISKVAEANEL 379
+ + KV EA E+
Sbjct: 250 INCYCKLDKVEEAWEV 265
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 108/264 (40%), Gaps = 43/264 (16%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-- 175
I + +A M++ A++ F EM+K G + ++ N L+ L K V F K+
Sbjct: 285 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDS--LCKKRGGVYTAVDLFNKLEG 342
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+ P TYN +I+ FC++ S EM K PN + +L+ G K + ++
Sbjct: 343 AGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKC-APNVITYSILIDGLCKVRRMKE 401
Query: 236 VGKVLQMME-------------------KCG----------------IASGVNVYNIRIQ 260
K L+ M+ KCG A ++N I
Sbjct: 402 AAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLID 461
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK +R+ + LL M + G KP++ TY LI G +E A++LF M C P
Sbjct: 462 GLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAP 518
Query: 321 DSYCFFMFTYFLCQGGEYETALKV 344
+ F LC + E A +
Sbjct: 519 NVTTFNFLIRGLCAQKKVEEARNI 542
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 10/278 (3%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +++++ G + + A+ F +M GL + +N LLLG ++F E
Sbjct: 33 HTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFRE 92
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ P S ++N +++ F +G + L +MR+ S + L+L G E+
Sbjct: 93 M-QAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWEN 151
Query: 232 K----YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K E + + M+ G+ + Y+I + +L R EA AL M P++
Sbjct: 152 KSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDI 208
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY L+ G+ K G A+ L + G EP+ + + + C+ + E A +V
Sbjct: 209 MTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMK 268
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ VP+ T +L+ G + +A +L M+K
Sbjct: 269 MIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 306
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE-EVKRIFTE 171
+SI++ G + + A +T E+M +G +V L+ G K E + +F E
Sbjct: 385 TYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLING--FCKCGELKSALLFFE 442
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K+ G PN+ +N +I C++ ++ +L M + +P+ + L++G +
Sbjct: 443 KMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN 502
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ ED ++ M A V +N I+ LC K+ EEA+ +LD
Sbjct: 503 RVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%)
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + L ++ ++A L +L+ PN TY LI GF K G + A +F+ M +
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G P++ LC+ G+ +ALK+ R A ++P ++ L+ G +V +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 376 ANELIGLMKK 385
A + M+K
Sbjct: 121 ALAHLQDMRK 130
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL+G K++ ++ + + A + YN+ I+ CK + +A ++ M S G
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ PN T L+ G + G + A KLF M G P S
Sbjct: 63 LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTS 102
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 4/173 (2%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PNA + +L+ GF K + V M+ G+ + N + LC++ + A L
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC- 333
M + P ++ L+ GF G + A M + + + LC
Sbjct: 90 FREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCW 149
Query: 334 ---QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
E A++ + A G P + L++ L+ ++AEA+ L M
Sbjct: 150 ENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM 202
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 153/371 (41%), Gaps = 59/371 (15%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL 120
G S++P + + F++ + + + + Q+ ++ R PD+ + + ++
Sbjct: 192 GVSISP----NVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDV------YTYCTLM 241
Query: 121 YG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI----LSKNYEEVKRIFTEFPK 174
G +A+ ID A+ +EM G S N L+ G LS+ + V +F +
Sbjct: 242 DGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLK--- 298
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G PN TYN +I C G S+L M PN +G ++ G K+ +
Sbjct: 299 --GCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRAL 356
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
D VL +ME+ G VY+ I L K +S+EA L M +G + N Y +I
Sbjct: 357 DGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVI 416
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSY------------------------------- 323
G ++G + A ++ + MTN GC P++Y
Sbjct: 417 DGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFT 476
Query: 324 ----CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
C+ + + LC+ G+ + A+ V + KG P S++ GL+ V +A +L
Sbjct: 477 QNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQL 536
Query: 380 IGLMKKRFPKS 390
M + P S
Sbjct: 537 YNEMLCQGPDS 547
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 3/199 (1%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E +F E V G E N+ Y+ VI C G +L+EM K PNA
Sbjct: 391 QEAMHLFKEM-TVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSS 449
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ GF++ +V + M K Y++ I LCK + +EA + ML +G
Sbjct: 450 LMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKG 509
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG--CEPDSYCFFMFTYFLCQGGEYET 340
KP++ Y +I+G G +E A +L+ M G +PD + + LC+
Sbjct: 510 CKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISR 569
Query: 341 ALKVCRASMAKGWVPHFST 359
A+ + + + +G P T
Sbjct: 570 AIDLLNSMLDRGCDPDLVT 588
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 131/313 (41%), Gaps = 39/313 (12%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F ++ + F ++ ++L+ +K + + F V YG+A++ + A+ F+
Sbjct: 92 TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIV-IFKAYGKAHLPEKAVDLFDR 150
Query: 137 MD-KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETYNKVIKSFC 193
M ++ +++ + N++L I + + G I PN T+N VIK+ C
Sbjct: 151 MACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMC 210
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + +M + P+ + L+ G
Sbjct: 211 KVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDG--------------------------- 243
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
LCK R +EA +LLD M G P+ T+ LI+G K+G+L A KL +M
Sbjct: 244 --------LCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNM 295
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P+ + + LC G+ E A+ + ++ VP+ T +++ GL +
Sbjct: 296 FLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRA 355
Query: 374 AEANELIGLMKKR 386
+ ++ LM++R
Sbjct: 356 LDGACVLALMEER 368
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 104/256 (40%), Gaps = 39/256 (15%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+IF PK+ T+ +I ++ GD S+ +L M+ + F ++
Sbjct: 75 KIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKA 134
Query: 227 FYKEHKYED----------------VGK----VLQMMEKCGI-------------ASGVN 253
+ K H E GK VL ++ + G+ A GV+
Sbjct: 135 YGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVS 194
Query: 254 V------YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ +N+ I+++CK+ ++A + M R +P++ TY L+ G K ++ A
Sbjct: 195 ISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAV 254
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M GC P F + LC+ G+ A K+ KG +P+ T +L+ GL
Sbjct: 255 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGL 314
Query: 368 ASISKVAEANELIGLM 383
K+ +A L+ M
Sbjct: 315 CLKGKLEKAISLLDRM 330
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 116/267 (43%), Gaps = 13/267 (4%)
Query: 108 RQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
R + + ++I++ G + + F EM++ G +V N L+ Y ++
Sbjct: 5 RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLI------DAYCKM 58
Query: 166 KRIFTEFPKVY-----GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
RI F + G++PN +YN +I C G + IL EM K P+ +
Sbjct: 59 GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 118
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
LL G+ KE + + M + G++ V Y I S+CK + A D M
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
RG++PN TY LI GF ++G L A ++ MT G P + F + C E
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 238
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGL 367
AL V + + KG P + ++++G
Sbjct: 239 ALGVVQEMVEKGLAPDVVSYSTIISGF 265
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 36/286 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EEM G N LL G N+ + I E + G+ P+ TY +I
Sbjct: 99 AWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR-NGVSPSVVTYTALI 157
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C++ + + +MR + +RPN + L+ GF ++ + ++L M + G +
Sbjct: 158 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 217
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I C L+R EEA ++ M+ +G+ P++ +Y +I GF ++G L+ A ++
Sbjct: 218 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 277
Query: 310 ---------------FASMTNGGCE--------------------PDSYCFFMFTYFLCQ 334
++S+ G CE PD + + C
Sbjct: 278 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 337
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
G+ AL + + KG++P T L+ GL ++ EA L+
Sbjct: 338 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 383
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 142/357 (39%), Gaps = 54/357 (15%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ + +A + N + ++++ R LR NER + I + + +++ A +
Sbjct: 151 VTYTALINSMCKARNLNRAMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILN 209
Query: 136 EMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM + G SV NA + G C+L + EE + E + G+ P+ +Y+ +I FC
Sbjct: 210 EMTESGFSPSVVTYNAFIHGHCVLER-MEEALGVVQEMVE-KGLAPDVVSYSTIISGFCR 267
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G+ + + EM K + P+A + L+ G + + + + Q M G+
Sbjct: 268 KGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFT 327
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL----- 309
Y I + C +A L D M+ +G P+ TY LI+G K+ AK+L
Sbjct: 328 YTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 387
Query: 310 ---------------------------------------------FASMTNGGCEPDSYC 324
F SM +P
Sbjct: 388 YEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAV 447
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + + C+GG A + + + G+VPH T+ +L+ L E +E+IG
Sbjct: 448 YNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIG 504
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 1/220 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN TYN +I+ FC G+ EM R PN + L+ + K + ++
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L+ M G+ + YN+ I LC+ +EA +L+ M +G P+ TY L++G+
Sbjct: 66 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KEGN A + A M G P + +C+ A++ +G P+
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNA 396
T +L+ G + + EA ++ M + F S +NA
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 225
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M R + PN + +L+ GF + + ME+ G V YN I + CK+ R
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA LL M S+G++PNL +Y +I+G +EG+++ A ++ M G PD +
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G + AL + + G P T +L+ + + A E M+ R
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY-EEVKRIFTEFPKVYGIE 179
Y + + +++F M + G +V N LL G +L NY + ++ E + +GI
Sbjct: 198 YLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNG-LLKLNYTDRCWEVYEEMER-FGIA 255
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN T+N + C+ GD+ V L +M + P+ + L+ + ++ + +D +
Sbjct: 256 PNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYL 315
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++M + G+ + Y + LCK R EA L M+ RG+ P++ TY LIHG+ K
Sbjct: 316 YKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCK 375
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
EG ++ ++ L M G PDS+ ++ + G++ +AL +
Sbjct: 376 EGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNL 420
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 3/253 (1%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK-RIFTEFPKVYGIEPNSE 183
N D + +EEM+++G+ ++ N +L +L K+ + K F E + G +P+
Sbjct: 237 NYTDRCWEVYEEMERFGIAPNLYTFN--ILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIV 294
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +I S+C G + + M R+ + P+ + L+ G KE + + ++ M
Sbjct: 295 TYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRM 354
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G++ + YN I CK + +E+++LL M+ GI P+ T L+ G+GKEG
Sbjct: 355 VHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKF 414
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A L + G + LC+ A + G P L
Sbjct: 415 LSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNEL 474
Query: 364 VTGLASISKVAEA 376
+ +AEA
Sbjct: 475 IKSFCQCDCIAEA 487
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P T N ++ + + + + EM R I PN F +L K+ V
Sbjct: 218 GFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKV 277
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K L+ ME+ G + YN I S C+ R ++A L M RG+ P+L +Y L++G
Sbjct: 278 NKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNG 337
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG + A +LF M + G PD + + C+ G+ + + + + G P
Sbjct: 338 LCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 397
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T LV G K A L+
Sbjct: 398 SFTCWVLVEGYGKEGKFLSALNLV 421
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 9/216 (4%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
++ ++K++ G M R P LL G K + + +V + M
Sbjct: 190 VFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEM 249
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E+ GIA + +NI LCK + + L+ M G P++ TY LI+ + ++G L
Sbjct: 250 ERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRL 309
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A L+ M G PD + LC+ G A ++ + +G P T +L
Sbjct: 310 DDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTL 369
Query: 364 VTGLASISKVAEANELIGLMKKRFPKSGDMWNAALP 399
+ G K+ E+ L+ M +WN P
Sbjct: 370 IHGYCKEGKMQESRSLLHDM---------IWNGISP 396
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 38/257 (14%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A ++ M + G+ + + AL+ G E ++F G+ P
Sbjct: 303 YCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVH-RGLSP 361
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I +C+ G S+L +M I P++ +L+ G+ KE K+ ++
Sbjct: 362 DIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLV 421
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL-----DG------------------ 277
+++ G++ ++Y+ I +LC+ R AK LL DG
Sbjct: 422 VELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQC 481
Query: 278 ------------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD-SYC 324
M+ + IKPNL TY+ +I + + L M G PD C
Sbjct: 482 DCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEIC 541
Query: 325 FFMFTYFLCQGGEYETA 341
+F Y C+ + + A
Sbjct: 542 RALF-YGYCRENDIDKA 557
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 36/236 (15%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG+ A+ E+ ++G+ S D + L++ K + K G +P
Sbjct: 408 YGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSK-DGHKP 466
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
E YN++IKSFC+ + + EM K I+PN
Sbjct: 467 ELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN------------------------ 502
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ Y I L +L RS E ++L+ M++ G+ P+L+ + L +G+ +E
Sbjct: 503 -----------LATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGYCRE 551
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+++ A+ L + D+ F G+ +L++ + G +P+
Sbjct: 552 NDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPN 607
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 40/335 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTF 134
A+ + L++ + + L+ +K R + E F I++ Y +A ++ A+ TF
Sbjct: 58 AYHTMIESLAKIRQYQIMWDLINAMK-RKRMLNVETF---CIIMRKYARAQKLEEAVYTF 113
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT------------------------ 170
M+KY + ++ A N L SKN + + IF
Sbjct: 114 NVMEKYDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTP 173
Query: 171 EFPKV---------YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
PK G P+ TY ++ C++G I+ EM +P + +
Sbjct: 174 NLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYS 233
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ + E++ ED MEK G+ + V YN I + CK+ + + +L+ M +
Sbjct: 234 VLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYK 293
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G++PN T +++ G + A ++F M CEPD+ + M C+ E E A
Sbjct: 294 GMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMA 352
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LKV + K +VP T L+ GL V+ A
Sbjct: 353 LKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHA 387
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 123/249 (49%), Gaps = 16/249 (6%)
Query: 56 FR-ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH 114
FR ++D+ C SP D + + I V L +A + +++E+ + + F
Sbjct: 182 FREMVDVGC-------SP-DIVTYGIMVDILCKAGRVDEALDIVKEMDL--TICKPTSF- 230
Query: 115 VHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
++S+++ YG N I+ A+ TF M+K G++ V A NAL+ ++ V R+ E
Sbjct: 231 IYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEM 290
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
G++PNS T N ++ + G++ + + M K P+A + +++ F + ++
Sbjct: 291 -DYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMI-KVCEPDADTYTMMIKMFCERNE 348
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E KV + M+K ++ +++ I LC+ A +L+ M+ +GI+P+ T+
Sbjct: 349 LEMALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGR 408
Query: 293 LIHGFGKEG 301
L H KEG
Sbjct: 409 LRHLLIKEG 417
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 8/249 (3%)
Query: 156 CILSKNY------EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
CI+ + Y EE F K Y + PN +N + + C+S + I +
Sbjct: 94 CIIMRKYARAQKLEEAVYTFNVMEK-YDVPPNLAAFNGLFSALCKSKNVRKAQEIFDSSK 152
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ + P++ + +LL G+ K ++ + M G + + Y I + LCK R +
Sbjct: 153 DRFV-PDSKTYTILLEGWGKTPNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVD 211
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA ++ M KP Y LIH +G E +E A F M G + D +
Sbjct: 212 EALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALI 271
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
C+ +++ +V KG P+ T+ ++ L + + EA + M K
Sbjct: 272 GAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIKVCEP 331
Query: 390 SGDMWNAAL 398
D + +
Sbjct: 332 DADTYTMMI 340
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 9/227 (3%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
IV YG +A +D A+ +EMD + + + L+ + E+ F
Sbjct: 193 DIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAVDTF 252
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
K G++ + YN +I +FC+ +VY +L EM K ++PN+ ++L
Sbjct: 253 LGMEK-NGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIA 311
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ ++ +V + M K + Y + I+ C+ E A + M + P++ T
Sbjct: 312 RGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHT 370
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+ LI+G +EG++ A + M G P F + L + G
Sbjct: 371 FSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKEG 417
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 10/335 (2%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+L+ F++L + L P + +++++ ++ L + S++LEE+ R +
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNP----NLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 108 RQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
F+ ++ G N+ A+ EM K GL +V L+ + N
Sbjct: 306 PDRVTFNT---LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
F + + G+ PN TY +I F + G Y I+ EM P + L+
Sbjct: 363 ME-FLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G + ED +LQ M + G V Y+ I C+ + E+A L M+++GI P
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
++ TY LI G K+ L LF M + G PD + C G+ + AL++
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ KG+ P T L+ G S+ EA L+
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR-IFTEFPKVYGIEP 180
+ N+I+ A+ YG V + NA+L I +K ++ IF E + G+ P
Sbjct: 143 ARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES-GVSP 201
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +I+ FC +G+ EM R PN + ++ + K K + K+L
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++M G+ + YN+ I LC+ + +E +L+ M R P+ T+ LI+G+
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN A L A M G P+ + +C+ G A++ +G P+ T
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 361 KSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAAL 398
+L+ G + + +A +++ +++ F + +NA +
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM + G+ +V N L+ G + N E F E + G PN TYN +I ++C
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMER-NGCLPNVVTYNTIIDAYC 249
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +L M K + PN + +++ G +E + ++ ++L+ M K
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N I C + +A L M+ G+ PN+ TY LI+ K GNL A + M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G P+ + Q G + A ++ + + G+ P T +L+ G + ++
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 374 AEANELIGLMKKR 386
+A+ L+ M +R
Sbjct: 430 EDASGLLQEMIER 442
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 5/280 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ + +A + N + L++++ R L N R + I + Q + A Q +
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402
Query: 136 EMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM + G ++ NAL+ G CIL + E+ + E + G P+ +Y+ +I FC
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGR-MEDASGLLQEMIE-RGFIPDVVSYSTIISGFCR 460
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + + + EM K I P+ + L+ G K+ + +V + Q M G+
Sbjct: 461 NQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVT 520
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I + C ++A L D M+ +G P++ TY LI+GF K+ + AK+L +
Sbjct: 521 YTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
P+ + C E+++AL + + KG +
Sbjct: 581 YEESVPNEITYNTLIDN-CNNLEFKSALALMKGFCMKGLM 619
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 37/290 (12%)
Query: 95 SQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDAL 149
S LL+E+ R PD+ +S ++ G + ++ A Q EM G+ V
Sbjct: 433 SGLLQEMIERGFIPDVVS------YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
++L+ G + EV +F E + G+ P+ TY +I ++C GD + EM
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSL-GLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGV-------NVYNIRIQS 261
+K P+ + +L+ GF K+ + ++ ++L +++ + + + + N N+ +S
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKS 605
Query: 262 LCKLKRS-------EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
L + EA +L+ ML +G K N + Y +IHG K GN+E A L+ M
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Query: 315 NGGCEPDSYCFFMFTYFLCQGGE-------YETALKVCR---ASMAKGWV 354
+ G P S L G+ + LK CR A++AK +
Sbjct: 666 HSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLI 715
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 94/248 (37%), Gaps = 38/248 (15%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
Y + +S ++ V+KS + SI+ + P + +L + +
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVK 185
Query: 236 VGK-VLQMMEKCGIASGVNVYNIRIQSL-------------------------------- 262
+ + + + M + G++ V YNI I+
Sbjct: 186 IAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTII 245
Query: 263 ---CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CKL++ EA LL M +G+ PNL +Y +I+G +EG ++ ++ M+
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANE 378
PD F C G + AL V A M K G P+ T +L+ + + A E
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME 364
Query: 379 LIGLMKKR 386
+ M+ R
Sbjct: 365 FLDQMRDR 372
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 9/297 (3%)
Query: 91 FNAISQLLEEL--KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDA 148
+ + LL+E+ + RP LR N V I YG+ N A F + + + +V A
Sbjct: 11 LDPLETLLKEMVAEGRP-LRPNT--LVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHA 67
Query: 149 LNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEM 208
L+ + S +E + ++ + + G + + YN +I+ F SG S + EM
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQ-KGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
+ K P+ +G L+ K + ++ M + G+ + YN+ + + K+ +
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
+ A L M RG +P++ TY L+ G + A+KLF MT GC PDSY +
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + G E A KV R + +G SL LA+++K + + LMK+
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL---LATLAKAGNMDRVWKLMKE 300
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 142/309 (45%), Gaps = 12/309 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDH 129
LDR A+++ + ++ ++ ++ E+K + PD F V+++ G+A +
Sbjct: 98 LDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPD-EYTYGFLVNAL---GKAGRVQE 153
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F+ M + GL ++ N L+ + +F E K G +P+ TYN ++
Sbjct: 154 ARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM-KRRGFQPSVVTYNILL 212
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C +G + + +M P++ + L+ G K + E+ KV + M G+A
Sbjct: 213 DALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA 272
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN + +L K + L+ M +G P+ ++ ++ GK + A+++
Sbjct: 273 VDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREV 332
Query: 310 FASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
FA M GC+PD SY + +Y + G+ A ++ + G++P T SL+ L
Sbjct: 333 FARMVESGCKPDLISYNILIDSY--ARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWL 390
Query: 368 ASISKVAEA 376
A+ +V EA
Sbjct: 391 ATDGQVDEA 399
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 1/261 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A + A + F +M G + L+ G S EE ++F E G+ +
Sbjct: 218 AGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVD-RGVAVDLV 276
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
YN ++ + ++G+ V+ ++ EM RK P+A F ++ K +K + +V M
Sbjct: 277 NYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARM 336
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G + YNI I S + + +A+ +L+ M+ G P TY LIH +G +
Sbjct: 337 VESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQV 396
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A + M GC PD + L + GE + A ++ + KG P +
Sbjct: 397 DEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVR 456
Query: 364 VTGLASISKVAEANELIGLMK 384
+ GLA ++ EA L MK
Sbjct: 457 IDGLAFDDRLDEALVLFKDMK 477
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 2/273 (0%)
Query: 109 QNERFHVHSIVLY-GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
Q +RF + ++ Y G++ +D AM+ F EM G L+ + +E +
Sbjct: 97 QLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARS 156
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
F + G+ PN TYN ++ +F + G + AEM+R+ +P+ + +LL
Sbjct: 157 FFDAMLE-RGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ K+ M G + Y+ + L K R EEA + M+ RG+ +L
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
Y L+ K GN++ KL M+ G PD++ F L + + + A +V
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ G P + L+ A A+A +++
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQML 368
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 1/217 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D + +EM + G + N ++ + + + +F + G +P+
Sbjct: 287 KAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES-GCKPDL 345
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+YN +I S+ GD++ +L EM P + L+ + + ++ VL+
Sbjct: 346 ISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEE 405
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
ME G V YN + L K ++ A L M +G++P+ +Y I G +
Sbjct: 406 METAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDR 465
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
L+ A LF M GC D + + + G+ E
Sbjct: 466 LDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 4/186 (2%)
Query: 203 SILAEM--RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
++L EM + +RPN L+ + + +K D + E + V+ + I
Sbjct: 16 TLLKEMVAEGRPLRPNT--LVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLID 73
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L E A+ + ++ +G + + Y LI FG+ G L+ A ++F M G EP
Sbjct: 74 ILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEP 133
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D Y + L + G + A A + +G P+ T L+ + ++ A L
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193
Query: 381 GLMKKR 386
MK+R
Sbjct: 194 AEMKRR 199
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 146/326 (44%), Gaps = 12/326 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + +++ V+ + Q + +E LK P ++IVL G A + A
Sbjct: 26 DIVTYNVVVNGICQEGR---VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 82
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM + G +V N L+ E + + PK YG PNS +YN ++ +
Sbjct: 83 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK-YGCTPNSLSYNPLLHA 141
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC+ + L M + P+ + LL + + + ++L ++ G A
Sbjct: 142 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 201
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I L K +++EA LL+ M+S+G++P++ TY + G +E +E A + F
Sbjct: 202 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 261
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G P++ + LC+ E +A+ + + G +P+ ST L+ GLA
Sbjct: 262 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 321
Query: 372 KVAEANELI------GLMKKRFPKSG 391
+ EA +L+ G+++K G
Sbjct: 322 LIKEARDLLDELCSRGVVRKSLINKG 347
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 1/222 (0%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
Y++ ++ E + G P+ TYN V+ C+ G L + PN +
Sbjct: 8 YKQAMKLLDEM-RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 66
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
++L G ++ED +++ M + G V +N+ I LC+ E A +L+ +
Sbjct: 67 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 126
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G PN +Y L+H F K+ ++ A M + GC PD + LC+ GE + A
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+++ KG P + +++ GL K EA EL+ M
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM 228
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%)
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ +L EMR K P+ + +++ G +E + +D + L+ + G
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YNI ++ LC +R E+A+ L+ M +G PN+ T+ LI ++G +E A ++
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
+ GC P+S + + C+ + + A+ +++G P + +L+T L +
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 373 VAEANELIGLMKKR 386
V A EL+ +K +
Sbjct: 183 VDVAVELLHQLKDK 196
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 10/250 (4%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELK----TRPDLRQNERFHVHSIVLYGQANMI 127
P + + F++ +S L + ++LE++ T L N H + + +
Sbjct: 94 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA-----FCKQKKM 148
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D AM + M G + + N LL S + + + K G P +YN
Sbjct: 149 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL-KDKGCAPVLISYNT 207
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
VI ++G + +L EM K ++P+ + + AG +E + ED + ++ G
Sbjct: 208 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 267
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I +YN I LCK + + A L M+ G PN TY LI G EG ++ A+
Sbjct: 268 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 327
Query: 308 KLFASMTNGG 317
L + + G
Sbjct: 328 DLLDELCSRG 337
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ +M++ ++ V NA++ ++ + +FTE GI P+ TY+ +I
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD-KGIFPDVITYSGMI 118
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
SFC SG + +L +M + I P+ F L+ KE K + ++ M + GI
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN I CK R +AK +LD M S+ P++ T+ LI+G+ K ++ ++
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M G ++ + + CQ G+ + A + ++ G P++ T +S++ L S
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 370 ISKVAEANELIGLMKK 385
++ +A ++ ++K
Sbjct: 299 KKELRKAFAILEDLQK 314
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 35/241 (14%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILA------------------------------- 206
+E + Y +I C+ GD+ S ++L+
Sbjct: 37 VEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQ 96
Query: 207 ----EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
EM K I P+ + ++ F + ++ D ++L+ M + I V ++ I +L
Sbjct: 97 NLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINAL 156
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K + EA+ + ML RGI P TY +I GF K+ L AK++ SM + C PD
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F C+ + +++ +G V + T +L+ G + + A +L+ +
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 383 M 383
M
Sbjct: 277 M 277
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 69/181 (38%), Gaps = 33/181 (18%)
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-------------------- 282
M + G V + + LC R +A AL+D M+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 283 -----------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
IK ++ Y +I K+G+ A+ LF M + G PD +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FPK 389
C+ G + A ++ R + + P T +L+ L KV+EA E+ G M +R FP
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 390 S 390
+
Sbjct: 181 T 181
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 10/335 (2%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
+L+ F++L + L P + +++++ ++ L + S++LEE+ R +
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNP----NLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 108 RQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
F+ ++ G N+ A+ EM K GL +V L+ + N
Sbjct: 306 PDRVTFNT---LINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRA 362
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
F + + G+ PN TY +I F + G Y I+ EM P + L+
Sbjct: 363 ME-FLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G + ED +LQ M + G V Y+ I C+ + E+A L M+++GI P
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
++ TY LI G K+ L LF M + G PD + C G+ + AL++
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLH 541
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ KG+ P T L+ G S+ EA L+
Sbjct: 542 DEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL 576
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR-IFTEFPKVYGIEP 180
+ N+I+ A+ YG V + NA+L I +K ++ IF E + G+ P
Sbjct: 143 ARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVES-GVSP 201
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +I+ FC +G+ EM R PN + ++ + K K + K+L
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++M G+ + YN+ I LC+ + +E +L+ M R P+ T+ LI+G+
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN A L A M G P+ + +C+ G A++ +G P+ T
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 361 KSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAAL 398
+L+ G + + +A +++ +++ F + +NA +
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 1/253 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM + G+ +V N L+ G + N E F E + G PN TYN +I ++C
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMER-NGCLPNVVTYNTIIDAYC 249
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +L M K + PN + +++ G +E + ++ ++L+ M K
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N I C + +A L M+ G+ PN+ TY LI+ K GNL A + M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G P+ + Q G + A ++ + + G+ P T +L+ G + ++
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRM 429
Query: 374 AEANELIGLMKKR 386
+A+ L+ M +R
Sbjct: 430 EDASGLLQEMIER 442
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 128/280 (45%), Gaps = 5/280 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ + +A + N + L++++ R L N R + I + Q + A Q +
Sbjct: 344 VTYTTLINSMCKAGNLNRAMEFLDQMRDR-GLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402
Query: 136 EMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM + G ++ NAL+ G CIL + E+ + E + G P+ +Y+ +I FC
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGR-MEDASGLLQEMIE-RGFIPDVVSYSTIISGFCR 460
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + + + EM K I P+ + L+ G K+ + +V + Q M G+
Sbjct: 461 NQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVT 520
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I + C ++A L D M+ +G P++ TY LI+GF K+ + AK+L +
Sbjct: 521 YTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
P+ + C E+++AL + + KG +
Sbjct: 581 YEESVPNEITYNTLIDN-CNNLEFKSALALMKGFCMKGLM 619
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 37/290 (12%)
Query: 95 SQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDAL 149
S LL+E+ R PD+ +S ++ G + ++ A Q EM G+ V
Sbjct: 433 SGLLQEMIERGFIPDVVS------YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
++L+ G + EV +F E + G+ P+ TY +I ++C GD + EM
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSL-GLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGV-------NVYNIRIQS 261
+K P+ + +L+ GF K+ + ++ ++L +++ + + + + N N+ +S
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKS 605
Query: 262 LCKLKRS-------EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
L + EA +L+ ML +G K N + Y +IHG K GN+E A L+ M
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665
Query: 315 NGGCEPDSYCFFMFTYFLCQGGE-------YETALKVCR---ASMAKGWV 354
+ G P S L G+ + LK CR A++AK +
Sbjct: 666 HSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALAKVLI 715
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 94/248 (37%), Gaps = 38/248 (15%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
Y + +S ++ V+KS + SI+ + P + +L + +
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVK 185
Query: 236 VGK-VLQMMEKCGIASGVNVYNIRIQSL-------------------------------- 262
+ + + + M + G++ V YNI I+
Sbjct: 186 IAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTII 245
Query: 263 ---CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CKL++ EA LL M +G+ PNL +Y +I+G +EG ++ ++ M+
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANE 378
PD F C G + AL V A M K G P+ T +L+ + + A E
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQAL-VLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME 364
Query: 379 LIGLMKKR 386
+ M+ R
Sbjct: 365 FLDQMRDR 372
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 148/323 (45%), Gaps = 17/323 (5%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNERFHVHSIVLYG- 122
+A P + + FS + L + F + ++ + E PD+R +++ ++ G
Sbjct: 244 VAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR------MYATIIDGV 297
Query: 123 -QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEP 180
+ ++ A M YGL +V N LL G + +EE + + E F K ++
Sbjct: 298 CKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLD- 356
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
T+N ++ C++G V +L +M P+ + ++ GF KE ++ +L
Sbjct: 357 -DVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 415
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M CG Y I ++ LC +R +A+ L+ M+ +G PN T+ LI+ K+
Sbjct: 416 RSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 475
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH---F 357
G +E A +L M GC PD + L + G + AL++ + KG P+ +
Sbjct: 476 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIY 535
Query: 358 STMKSLVTGLASISKVAEANELI 380
S++ S ++G I+KV + E I
Sbjct: 536 SSIASALSGEGRINKVIQMFENI 558
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ ++ G V N +L +E R+ + +G EP+ +YN V+
Sbjct: 165 AVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVL 224
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C + V ++ EM PN F L+ + +E V +V M + G A
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V +Y I +CK +R E A+ +L+ M S G+ PN+ Y L+ G E A+ L
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M + C D F + FLCQ G + ++V + G +P T +++ G
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404
Query: 370 ISKVAEANELI 380
+ EA L+
Sbjct: 405 EGLIDEAVMLL 415
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 131/316 (41%), Gaps = 8/316 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D ++++ + L A + + L+EE+ P++ H + + +
Sbjct: 216 DVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH----LCRNGLFERV 271
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +M ++G V ++ G + E + I P YG+ PN YN ++K
Sbjct: 272 HEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS-YGLSPNVVCYNTLLK 330
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + +LAEM K + F +L+ + + V +VL+ M + G
Sbjct: 331 GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMP 390
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I CK +EA LL M + G +PN +Y ++ G A++L
Sbjct: 391 DVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELM 450
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M GC P+ F FLC+ G E A+++ + + G P + +++ GL
Sbjct: 451 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 510
Query: 371 SKVAEANELIGLMKKR 386
EA EL+ +M K+
Sbjct: 511 GNTDEALELLNVMVKK 526
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 133/305 (43%), Gaps = 2/305 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L A+ + LL E+ + + F++ + Q ++D ++ E
Sbjct: 323 VCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNIL-VDFLCQNGLVDRVIEVLE 381
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M ++G V ++ G +E + G PN+ +Y V+K C +
Sbjct: 382 QMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSM-AACGCRPNTVSYTIVLKGLCSA 440
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
++++M ++ PN F L+ K+ E ++L+ M G + + Y
Sbjct: 441 ERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 500
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K ++EA LL+ M+ +G+ PN Y + EG + ++F ++ +
Sbjct: 501 STVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQD 560
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ GE + A++ ++ G VP+ ST L+ GLAS V E
Sbjct: 561 TTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKE 620
Query: 376 ANELI 380
A E++
Sbjct: 621 AQEIL 625
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 122/288 (42%), Gaps = 12/288 (4%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QA 124
+ PLD + F+I V L Q + + ++LE++ PD+ ++ V+ G +
Sbjct: 352 DCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDV------ITYTTVINGFCKE 405
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ID A+ M G R + + +L G ++ + + + + ++ + G PN T
Sbjct: 406 GLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQ-QGCPPNPVT 464
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I C+ G +L +M P+ + ++ G K ++ ++L +M
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
K G++ +Y+ +L R + + + + ++ + Y +I K G +
Sbjct: 525 KKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETD 584
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
A + A M + GC P+ + + L G + A ++ +KG
Sbjct: 585 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 93/216 (43%), Gaps = 7/216 (3%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN+ TY ++++ C G + ++L +M R+ P + + L + +
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPNLDTYKHLIHG 296
VL+ + G A V N+ +Q++C +EA LL +L S G +P++ +Y ++ G
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVP 355
+ L M GC P+ F LC+ G +E +V A MA+ G P
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEV-HAQMAEHGCAP 285
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+++ G+ ++ A ++ R P G
Sbjct: 286 DVRMYATIIDGVCKEERLEVARGIL----NRMPSYG 317
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A +EM K GLR S N L+ G E ++ E G+ P ++N
Sbjct: 288 LQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV-TRGVSPTVASHN 346
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC+ G S L++M +K++ P+ + L+ GF + + +L +
Sbjct: 347 TIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFR 406
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
++ + YN I LC+L E A L + M++RGI P++ TY L++G K GN+ A
Sbjct: 407 NLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMA 466
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+ F M + G PD + + + G+ A K+ + KG+ P T V G
Sbjct: 467 KEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNG 526
Query: 367 LASISKVAEANELIGLM 383
L + + EA EL+ M
Sbjct: 527 LCKLGNLEEAGELLQKM 543
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 45/265 (16%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
EV R+ E YGI P TYN ++ SFC+ G+ ++ +M+ + P+ F +L
Sbjct: 223 EVYRMMGE----YGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVL 278
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G K+ + + ++Q M K G+ YN I CK EA AL + M++RG+
Sbjct: 279 INGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGV 338
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD---------SYC---------- 324
P + ++ +++GF KEG + A++ + M PD +C
Sbjct: 339 SPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFI 398
Query: 325 -----------FFMFTY-----FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
F + TY LC+ G+ ETALK+ + +G P T LV G
Sbjct: 399 LLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGAC 458
Query: 369 SISKVAEANEL------IGLMKKRF 387
+ + A E +GL +F
Sbjct: 459 KLGNMLMAKEFFDEMLHVGLAPDQF 483
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 123/313 (39%), Gaps = 42/313 (13%)
Query: 116 HSIVLYG---QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
H+ ++YG + M D A Q +M K L + + N L+ G N E + E
Sbjct: 345 HNTIMYGFCKEGKMSD-ARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDEL 403
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG------ 226
+ + N TYN +I C GD + + +M + I P+ + +L+ G
Sbjct: 404 -RFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGN 462
Query: 227 ------FYKEH--------------------KYEDVGKVLQMMEKC---GIASGVNVYNI 257
F+ E K D K ++ E+ G V YN+
Sbjct: 463 MLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNV 522
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ LCKL EEA LL M+ G P+ TY +H + G+L +++F M + G
Sbjct: 523 FVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRG 582
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P + + + G + A+ KG VP+ T L+ G + K+ +A
Sbjct: 583 QTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQAC 642
Query: 378 ELIGLMKKR--FP 388
+ M+++ FP
Sbjct: 643 KFFIEMQEKGIFP 655
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 119/291 (40%), Gaps = 10/291 (3%)
Query: 97 LLEELKTRPDLRQNERFHV--HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNAL 152
LL+EL+ R N F++ ++ ++ G + ++ A++ E+M G+ V L
Sbjct: 399 LLDELRFR-----NLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVL 453
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G N K F E V G+ P+ Y I + GD++ + + EM K
Sbjct: 454 VNGACKLGNMLMAKEFFDEMLHV-GLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKG 512
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
P+ + + + G K E+ G++LQ M + G Y + + + E +
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGR 572
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
+ MLSRG P + TY LIH G L+ A F M G P+ + +
Sbjct: 573 EIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGF 632
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
C+ + + A K KG P+ T L+ ++ K EA L M
Sbjct: 633 CKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQM 683
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P TY +I + +G + EM+ K + PN + +L+ GF K K +
Sbjct: 582 GQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQA 641
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K M++ GI Y I I C + + +EA L ML + I+P+ T+ L+
Sbjct: 642 CKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKK 701
Query: 297 FGKEGNLEGAKKLFASMTNG 316
K+ ++ + + + + +G
Sbjct: 702 LDKDYKVQAVQFIESLILDG 721
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 14/323 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D+ +S+ + L ++ + L+E + +R PD R + I + +D A
Sbjct: 121 DKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPD----ARIYDPVIEELSKTGRVDEA 176
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ +E D SV N+L+LG + ++ + ++FT + G P+ TYN + +
Sbjct: 177 VEIAKEADAKHC-TSVVTYNSLVLGFLKARRLKRGIKVFTRMART-GPSPDIYTYNILFE 234
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
G Y +L M + + P+ F L+ G ++++Y ++Q M G
Sbjct: 235 GLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDP 294
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I ++ L + R++E L +L R + PN+ TY ++ K G L+ A +LF
Sbjct: 295 NAITYTILLKWLARNARTDECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLF 354
Query: 311 ASMTNGGCE-PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M C P++ + + LC E E A+ + A +G P + ++V
Sbjct: 355 GVMLASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCK 414
Query: 370 ISKVAEANELIGLMKKRFPKSGD 392
++ EA EL+ +R P +GD
Sbjct: 415 QGRIDEAFELL----ERMPFAGD 433
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 113/303 (37%), Gaps = 71/303 (23%)
Query: 119 VLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
V Y + + ++ ++M + G S+ LN GC
Sbjct: 24 VKYSEQGNLRATIELLKDMAENGSTLSIQDLN----GC---------------------- 57
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVG 237
++ C++G+ L E + S+R + + + +L+A + D
Sbjct: 58 ----------LRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDAL 107
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN----------- 286
++L+ ME G+ + + Y++ I SLCK ++AK L++ M+SR P+
Sbjct: 108 ELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEEL 167
Query: 287 -----------------------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+ TY L+ GF K L+ K+F M G PD Y
Sbjct: 168 SKTGRVDEAVEIAKEADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIY 227
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + L + G + A K+ G +P T SL+ GL ++ A LI M
Sbjct: 228 TYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEM 287
Query: 384 KKR 386
R
Sbjct: 288 VSR 290
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 11/234 (4%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE K +F + K + + + + E G+ + +L +M + D
Sbjct: 5 EESKALFQLWKK--------QAFPALAVKYSEQGNLRATIELLKDMAENGSTLSIQDLNG 56
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L G K + + L+ + + + V+ Y+I + +L KR+ +A LL+ M S
Sbjct: 57 CLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAALTAAKRNNDALELLEQMESV 116
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G++ + DTY +IH K G ++ AK L M + C PD+ + L + G + A
Sbjct: 117 GLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEA 176
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+++ + + AK T SLV G ++ ++ M + P S D++
Sbjct: 177 VEIAKEADAKH-CTSVVTYNSLVLGFLKARRLKRGIKVFTRMARTGP-SPDIYT 228
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 36/273 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ FEEM + G+ SV +AL+ G EE ++ E K G+ PN T N V+
Sbjct: 277 AVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEM-KDLGLVPNLATLNSVL 335
Query: 190 KSFCESG---------DSSS---------VYSILAE-----------------MRRKSIR 214
FC+ G DS Y+IL + M K +R
Sbjct: 336 NGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVR 395
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PNA + L+AGF + + V +L M G+ + + YN+ I +LC +A L
Sbjct: 396 PNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKL 455
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
LD ML G++P TY +I+G+ ++GN++ A ++ M G + + +F LC+
Sbjct: 456 LDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCR 515
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G+ E ++ + KG VP+ T ++ G+
Sbjct: 516 MGKMEETNELLNEMLEKGLVPNGVTYDTIKEGM 548
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 1/264 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+A + H +EM + G+ + N L+ G N R+F E K GI +
Sbjct: 234 GRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEM-KQQGIAAS 292
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TY+ ++ C G ++ EM+ + PN +L GF K+ D +
Sbjct: 293 VVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWID 352
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
ME+ + V Y I + +L + ++A A+ + M +G++PN Y LI GF + G
Sbjct: 353 SMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNG 412
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ L M G D + + LC GE A+K+ + G P T
Sbjct: 413 DWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYN 472
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
+++ G + A E+ M+K
Sbjct: 473 TIINGYCEKGNIKSAYEIRTRMEK 496
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R+ + P+ F ++++G K + G V + + G+A V YN I CK R+
Sbjct: 178 RRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAG 237
Query: 270 ---EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
ALL M+ GI PN T+ L++G+ K+ N A ++F M G +
Sbjct: 238 RMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYS 297
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ LC G+ E +K+ G VP+ +T+ S++ G + +A I M+++
Sbjct: 298 ALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQK 357
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + + A+ E M G+R + N L+ G + ++ V + E ++ G+
Sbjct: 373 YRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEM-RMKGVRA 431
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I + C G+ +L EM + P + ++ G+ ++ + ++
Sbjct: 432 DIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIR 491
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
MEK + V YN+ I+ LC++ + EE LL+ ML +G+ PN TY + G ++
Sbjct: 492 TRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEK 551
Query: 301 G 301
G
Sbjct: 552 G 552
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 39/262 (14%)
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD----- 197
R S ++N LL + ++ + +R F + + P+ T+N VI C++G
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALR-RRVSPDLFTFNIVISGLCKTGQLRKAG 205
Query: 198 -----------SSSVYS----------------------ILAEMRRKSIRPNATDFGLLL 224
+ SV + +L EM I PN F +L+
Sbjct: 206 DVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLV 265
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G+ K+ +V + M++ GIA+ V Y+ + LC + EE L+D M G+
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
PNL T +++GF K+G + A+ SM +P+ + + + + + AL V
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAV 385
Query: 345 CRASMAKGWVPHFSTMKSLVTG 366
A KG P+ L+ G
Sbjct: 386 KEAMSGKGVRPNARIYNCLIAG 407
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 3/174 (1%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
RP+A LL+ + + + + + ++ + +NI I LCK + +A
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGF---GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
+ + + G+ P++ TY +I G+ G+ G + L M G P+ F +
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
C+ A++V +G T +LV GL S KV E +L+ MK
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMK 320
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 38/309 (12%)
Query: 112 RFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+ + +++++G +A + +A F+E+ K GLR +V + N L+ GC S + EE R+
Sbjct: 247 KIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL- 305
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ G+ P+ T++ +I C+ G + EM + + PN F L+ G K
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
K + K QMM G+ + YN I LCK+ +EA+ L++ M + G+KP+ T
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425
Query: 290 YKHLIHGFGKEGNLEG-----------------------------------AKKLFASMT 314
+ LI G K+G++E A ++ M
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
+ G +PD + M C+ G+ + K+ + + G VP T +L+ GL ++
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545
Query: 375 EANELIGLM 383
A L+ M
Sbjct: 546 NAKMLLDAM 554
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ + + E+ G + N L+ G + + + +F E PK G+ P ++N
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPK-RGLRPTVVSFN 287
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+SGD + + M + + P+ F L+ G KE + ++ + M
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + I CK + + A ML++G++P+L TY LI+G K G+L+ A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++L MT G +PD F C+ G+ E+AL++ R + +G +L++G
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467
Query: 367 LASISKVAEANELIGLM 383
L +V +A ++ M
Sbjct: 468 LCREGRVHDAGRMLTDM 484
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 41/266 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ--ANMIDHAM 131
D FS ++ L + + S L +E+ R + F + ++ GQ +D A+
Sbjct: 317 DVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF---TTLIDGQCKGGKVDLAL 373
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F+ M G+R + NAL+ G + +E +R+ E G++P+ T+ +I
Sbjct: 374 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM-TASGLKPDKITFTTLIDG 432
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG-------------- 237
C+ GD S I M + I + F L++G +E + D G
Sbjct: 433 CCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPD 492
Query: 238 ---------------------KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
K+L+ M+ G GV YN + LCK + + AK LLD
Sbjct: 493 DPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLD 552
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGN 302
ML+ G+ PN TY L+ G K G+
Sbjct: 553 AMLNVGVAPNDITYNILLDGHSKHGS 578
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN +I C+ GD ++ EM ++P+ F L+ G K+ E
Sbjct: 383 GVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESA 442
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + M + GI + I LC+ R +A +L MLS G KP+ TY +I
Sbjct: 443 LEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDC 502
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+G+++ KL M + G P + LC+ G+ + A + A + G P+
Sbjct: 503 FCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPN 562
Query: 357 FSTMKSLVTG 366
T L+ G
Sbjct: 563 DITYNILLDG 572
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A++ + M+ G++ ++ + L+ G + K++ +F + K G
Sbjct: 450 INLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVK-DG 508
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I++FC G+ + EM+++ RP F ++ GF +
Sbjct: 509 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 568
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ MM G V+ +N I L + + E+A +LD M GI PN TY ++HG+
Sbjct: 569 EIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGY 628
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A + F + G E D Y + C+ G ++AL V R M+ +P
Sbjct: 629 ASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTR-EMSSQKIPRN 687
Query: 358 STMKS-LVTGLASISKVAEANELIGLMKK 385
+ + + L+ G A V EA EL+ MK+
Sbjct: 688 TFVYNILIDGWARRGDVWEAAELMQQMKQ 716
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 150/390 (38%), Gaps = 49/390 (12%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
RLK +N F + + L P+ L +I + N AI + E K R
Sbjct: 489 VRLKDWANAFAVFEDVVKDGLKPDVVLYN---NIIRAFCGMGNMDRAIRTVKEMQKER-- 543
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
R R + I + ++ + A++ F+ M G +V NAL+LG + E+
Sbjct: 544 HRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAV 603
Query: 167 RIFTEFPKVYGIEPNSETYNKV-----------------------------------IKS 191
I E + GI PN TY + +K+
Sbjct: 604 EILDEM-SLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKA 662
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+SG S ++ EM + I N + +L+ G+ + + +++Q M++ G+
Sbjct: 663 CCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPD 722
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
++ Y I + CK + A + M G+KPN+ TY LIHG+ + E A K F
Sbjct: 723 IHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQ 782
Query: 312 SMTNGGCEPDSYCFF-MFTYFLCQGGE-----YETALKVCRASMAKGWVPHFSTMKSLVT 365
M + G +PD + + T L + Y + +CR + T
Sbjct: 783 EMKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSK 842
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWN 395
L I + EL ++K FP + +N
Sbjct: 843 CLRKIERT--GGELTEALQKTFPPDWNSYN 870
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 2/309 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI V ++ A +E K R N + + I + QA + A
Sbjct: 339 VTYSILVGGFAKIADAEAADHWFKEAKER-HTTLNAIIYGNIIYAHCQACNMTQAEALVR 397
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D + ++ G + N E+ +F K G P+ +Y +I + +
Sbjct: 398 EMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRL-KECGFTPSVISYGCLINLYIKI 456
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + M I+ N + +L+ GF + + + V + + K G+ V +Y
Sbjct: 457 GKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLY 516
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I++ C + + A + M +P T+ +IHGF + G++ A ++F M
Sbjct: 517 NNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRW 576
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + F L + + E A+++ G P+ T +++ G AS+ +
Sbjct: 577 SGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGK 636
Query: 376 ANELIGLMK 384
A E +K
Sbjct: 637 AFEYFTKLK 645
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 128/329 (38%), Gaps = 47/329 (14%)
Query: 80 IAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEM 137
I + K+S+A +S+++E + +++ +S+++ G + D +A FE++
Sbjct: 454 IKIGKVSKALE---VSKMMEVAGIKHNMK------TYSMLINGFVRLKDWANAFAVFEDV 504
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K GL+ V N ++ N + R E K P + T+ +I F SGD
Sbjct: 505 VKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERH-RPTTRTFMPIIHGFARSGD 563
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYK----------------------EHKYE- 234
I MR P F L+ G + EH Y
Sbjct: 564 MRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTT 623
Query: 235 ---------DVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
D GK + K G+ V Y +++ CK R + A A+ M S+
Sbjct: 624 IMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQK 683
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
I N Y LI G+ + G++ A +L M G +PD + + F C+ G+ + A
Sbjct: 684 IPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRAT 743
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASIS 371
K + G P+ T +L+ G A S
Sbjct: 744 KTIQEMEVVGVKPNIKTYTTLIHGWARAS 772
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 135/349 (38%), Gaps = 50/349 (14%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQS 145
++ ++ A+ Q E +K +P ++ F + + Y + + HA TFE M G+ +
Sbjct: 248 TEPENWQAVVQAFERIK-KPSRKE---FGL-MVTYYARRGDMHHARGTFESMRARGIEPT 302
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
+L+ + ++ EE + K GIE + TY+ ++ F + D+ +
Sbjct: 303 SHVYTSLIHAYAVGRDMEEALSCVRKM-KEEGIEMSLVTYSILVGGFAKIADAEAADHWF 361
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
E + + NA +G ++ + +++ ME+ GI + +++Y+ + +
Sbjct: 362 KEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTII 421
Query: 266 KRSEEAKALLD------------------------GMLSR-----------GIKPNLDTY 290
E+ + D G +S+ GIK N+ TY
Sbjct: 422 GNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTY 481
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI+GF + + A +F + G +PD + C G + A++ +
Sbjct: 482 SMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQK 541
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAALP 399
+ P T ++ G A + A E+ +M+ W+ +P
Sbjct: 542 ERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMR---------WSGCIP 581
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 147/348 (42%), Gaps = 10/348 (2%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK 102
+ I LKSE NP L I + P F + +L +S+++E ++
Sbjct: 11 KRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIR 70
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK-YGLRQSVDALNALLLGCILSKN 161
T+ + E + I Y + +M D A+ F+ M + +G + + + N+LL I S
Sbjct: 71 TQ-KCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNK 129
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
++E + F F + G+ PN +TYN +IK C +L M + P+ +G
Sbjct: 130 WDEAESFFLYF-ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYG 188
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK----LKRSEEAKALLDG 277
L+ K D K+ M + G+ V YNI I K L SE + LL G
Sbjct: 189 TLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKG 248
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
+ PN+ +Y +I+G K G + + +++ M D Y + + LC G
Sbjct: 249 ---PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ A +V + G P +++ G ++ E EL +M+K
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 144/318 (45%), Gaps = 13/318 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYG--QANMID 128
D +S + L + + + +++ +E+ PD+ V++ +L G +A I+
Sbjct: 289 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV------VYNTMLNGYLRAGRIE 342
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
++ ++ M+K G R +V + N L+ G + +E I+ P+ +S TY +
Sbjct: 343 ECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPE-KDCCADSMTYGVL 400
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C++G + SIL E + + ++ G +E + ++V VL M K G
Sbjct: 401 VHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGC 460
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+V N I + + E+A M+S+G P + TY LI+G K A
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M + G +P+ + + LCQG + + AL + ++ KG+ P ++ GL
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580
Query: 369 SISKVAEANELIGLMKKR 386
S KV +A +L MK+R
Sbjct: 581 SSGKVEDALQLYSEMKQR 598
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 12/265 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT-RPDLRQNERFHVHSIVL-YGQANMIDHAM 131
D M + + V L + + N +LEE + R DL + F S++ + +D
Sbjct: 393 DSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL---DTFAYSSMINGLCREGRLDEVA 449
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
++M K+G + + NA++ G + + E+ R F G P TYN +I
Sbjct: 450 GVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS-KGCFPTVVTYNTLING 508
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE-DVGKVLQMMEKCGIAS 250
++ S Y+++ EM K +PN + LL+ G + K + + Q +EK G
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK-GFKP 567
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V ++NI I LC + E+A L M R PNL T+ L+ GF K + E A K++
Sbjct: 568 DVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIW 627
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQG 335
+ S C++M CQG
Sbjct: 628 DHILQSW--SSSNCYYM--EHTCQG 648
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 116/296 (39%), Gaps = 38/296 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F+EM + G+ V N L+ G + I+ K + PN +YN +I
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262
Query: 190 KSFC------------------ESGDSSSVYSIL-----------------AEMRRKSIR 214
C E G YS L EM +
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ + +L G+ + + E+ ++ ++MEK G + V+ YNI I+ L + + +EA ++
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISI 381
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ + + + TY L+HG K G L A + NG + D++ + LC+
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCR 441
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM--KKRFP 388
G + V G P+ +++ G SK+ +A G M K FP
Sbjct: 442 EGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFP 497
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 2/305 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +S V + N +S+LL E++ +L ++V + Y + I AM
Sbjct: 274 DINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVL-LEAYAELGSIKEAMGV 332
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M G + + LL Y++V+ +F E KV +P++ TYN +I+ F
Sbjct: 333 FRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEM-KVSNTDPDAGTYNILIQVFG 391
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
E G V ++ +M +++ PN + L+ K YED K+L M + G+
Sbjct: 392 EGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSK 451
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I++ + EEA + + M G P ++TY LIH F + G + A+ + + M
Sbjct: 452 AYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRM 511
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G + D + F QGG+YE A+K P+ T++++++ S V
Sbjct: 512 NESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLV 571
Query: 374 AEANE 378
E E
Sbjct: 572 DEGEE 576
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 2/263 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
F++ + +Q + +L + ++ + + NE H I L G+ ++D + F+EM
Sbjct: 101 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEM 160
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG- 196
G+ ++V + A++ + + + K + P+ TYN VI + G
Sbjct: 161 PSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGM-KQERVSPSILTYNTVINACARGGL 219
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D + + AEMR + I+P+ + LL ++ V + M + GI +N Y+
Sbjct: 220 DWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYS 279
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+Q+ KL R E+ LL M G P++ +Y L+ + + G+++ A +F M
Sbjct: 280 YLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAA 339
Query: 317 GCEPDSYCFFMFTYFLCQGGEYE 339
GC ++ + + + G Y+
Sbjct: 340 GCVANAATYSVLLNLYGKHGRYD 362
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 104/258 (40%), Gaps = 1/258 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A F M++ G+ ++ + L+ E+V + E + G P+ +YN
Sbjct: 257 DEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREM-ECGGNLPDITSYNV 315
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++++ E G + +M+ NA + +LL + K +Y+DV + M+
Sbjct: 316 LLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSN 375
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
YNI IQ + +E L M ++PN+ TY+ LI GK G E AK
Sbjct: 376 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAK 435
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
K+ M G P S + Q YE AL + G P T SL+
Sbjct: 436 KILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAF 495
Query: 368 ASISKVAEANELIGLMKK 385
A EA ++ M +
Sbjct: 496 ARGGLYKEAEAILSRMNE 513
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 41/205 (20%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + + A M++ GL++ V + N ++ YEE + + E K EP
Sbjct: 495 FARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKA-NCEP 553
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T V+ +C +G E++ I P+ + ++LA + K + D ++
Sbjct: 554 NELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLI 613
Query: 241 QMM--------------------------------------EKCGIASGVNVYNIRIQSL 262
M E CG+ G+ YN +++L
Sbjct: 614 DAMITMRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGL--GMRFYNALLEAL 671
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNL 287
+ + E A +L+ RG+ P L
Sbjct: 672 WCMFQRERAARVLNEASKRGLFPEL 696
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+ +++++ G Q + ++ A+ ++E+ K GL + L+ G +K + E K +F E
Sbjct: 257 YTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLE 316
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
P+ +G+ P YN ++ SG++ ++ EM R + P+ +++ G
Sbjct: 317 MPR-FGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGG 375
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + LQ +++ G+ YN I C++ EEA A M GI+PN+ +Y
Sbjct: 376 QMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYS 435
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G K G ++ A ++ M G EP+ + + + G + A ++ + +
Sbjct: 436 SLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIEN 495
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELI 380
G P+ T+ LV GL ++V EA +
Sbjct: 496 GISPNAITVSVLVDGLCRENRVQEAVRFV 524
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 9/302 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTF 134
A + V LSQ + + L+T P L + VL G +A A + F
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRRLRTLPAL------PACNAVLDGLVKARRPGCAWELF 174
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+EM + GL SV N L+ C + + ++ + I+PN TY +I + CE
Sbjct: 175 DEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQM-VAQQIDPNVVTYTTMICALCE 233
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G + M+ ++PN + +L++G + + Q + K G+ +
Sbjct: 234 EGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVI 293
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+ I CK KR EAK + M G+ P + Y L+ G + GN + A L+ MT
Sbjct: 294 FTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMT 353
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G PD + + LC GG+ A + + G + + +L+ I +
Sbjct: 354 RLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLE 413
Query: 375 EA 376
EA
Sbjct: 414 EA 415
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
R+ D A + P ++ +++ +S Q + N+ L +EL + L N
Sbjct: 242 RLFDAMKEAGMQP----NQYTYNVLMSGHCQRDDVNSAVVLYQEL-LKSGLNPNAVIFTT 296
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
I + +A A F EM ++G+ +V N+L+ G S N +E ++ E ++
Sbjct: 297 LIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRL- 355
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ T + V++ C+ G L ++ + NA + L+ + + E+
Sbjct: 356 GLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEA 415
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
M + GI V Y+ I K + + A A+ M+++GI+PN+ TY LIHG
Sbjct: 416 LATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 475
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
K G ++ A +L M G P++ + LC+ + A++
Sbjct: 476 HAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVR 522
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 102/253 (40%), Gaps = 25/253 (9%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
GQ ++ D +Q +E G+ + A NAL+ N EE T +V GIEPN
Sbjct: 375 GQMHVADRFLQGVQE---DGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEV-GIEPN 430
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+Y+ +I + G +I EM K I PN + L+ G K + ++ +
Sbjct: 431 VVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHK 490
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK----------------- 284
M + GI+ ++ + LC+ R +EA + M G+K
Sbjct: 491 EMIENGISPNAITVSVLVDGLCRENRVQEAVRFV--MEYSGLKCSDIHSVFSNFTIEEEC 548
Query: 285 --PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
PN Y LI+G +G A KLF+ M G PDS+ + + C G A+
Sbjct: 549 LIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAM 608
Query: 343 KVCRASMAKGWVP 355
+ M G P
Sbjct: 609 MLYADMMKIGVKP 621
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 21/268 (7%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D SI V L + + L+ ++ + N + I Y + ++ A+ T
Sbjct: 360 DEFTCSIVVRGLCDGGQMHVADRFLQGVQ-EDGVNLNAAAYNALIDEYCRIGNLEEALAT 418
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + G+ +V + ++L+ G + I+TE GIEPN TY +I
Sbjct: 419 CTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEM-VAKGIEPNVVTYTALIHGHA 477
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE---------------DVGK 238
++G + + + EM I PNA +L+ G +E++ + D+
Sbjct: 478 KNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHS 537
Query: 239 VLQ---MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V + E+C I + V +Y I L + EA L M G+ P+ TY LI
Sbjct: 538 VFSNFTIEEECLIPNSV-IYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIR 596
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSY 323
G G + A L+A M G +P Y
Sbjct: 597 GQCMLGYVLNAMMLYADMMKIGVKPTRY 624
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 1/254 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q I A+ +E+M++ G++ + ++LLL ++ +E +++TE P G PN
Sbjct: 398 QRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPG-KGFTPNV 456
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++K Y++LAEM++ + N + L+ G + +VG++L+
Sbjct: 457 VTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKR 516
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
E G YN I K A A+ M ++GI PN+ TY I G+ K
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A K+ + G PD + Y CQ G AL+V + G +P+ S S
Sbjct: 577 CDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNS 636
Query: 363 LVTGLASISKVAEA 376
+TG ++ + EA
Sbjct: 637 FITGYKNLKMMEEA 650
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI PN TY I +C++ +L ++R K +RP+ + L+ GF +E
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHA 615
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL +M K G+ ++VYN I LK EEA + M+ GI + TY LI G
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDG 675
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+GN+ A KL++ M G PD F T+ LC+ G+ + A K+ P+
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPN 735
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
L+ G K+ EA L M +R
Sbjct: 736 VLMYNMLINGYLRNGKLQEAFRLHDEMLER 765
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 122/306 (39%), Gaps = 35/306 (11%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE- 171
+++++ G + M + A + +M +GL S + N ++ G + K +++ +F E
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM 378
Query: 172 ----FPKVY----------------------------GIEPNSETYNKVIKSFCESGDSS 199
P + G++P TY+ ++ +C +G
Sbjct: 379 ADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMD 438
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ EM K PN + L+ G + ++ +L M++ G++ YN I
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLI 498
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
LC + R E +L + G P TY +I+GF K G + A ++ M G
Sbjct: 499 NGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIP 558
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
P+ + F C+ + ALK+ KG P + SL+ G ++ A ++
Sbjct: 559 PNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQV 618
Query: 380 IGLMKK 385
+ LM K
Sbjct: 619 LVLMLK 624
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 3/206 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + D A++ ++ GLR + A N+L+ G N ++ K G+ P
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLK-DGLLP 629
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N YN I + +M ++ I + + L+ GF K+ K+
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689
Query: 241 -QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+M+ K I + + LC+ ++A+ LLD M I+PN+ Y LI+G+ +
Sbjct: 690 SEMVAKGNIPDHI-TFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLR 748
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCF 325
G L+ A +L M PD +
Sbjct: 749 NGKLQEAFRLHDEMLERKIMPDDTTY 774
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 2/231 (0%)
Query: 149 LNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEM 208
+ ++ C Y++ R+F E P IEP+ + I S C+ D++ +L +M
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMP-ASEIEPDQRVCSVAIASLCKLRDANRALLVLRKM 238
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
+ P F ++ K + E+ + + G V + + C +
Sbjct: 239 QDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREV 298
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
+A + + L G+ P TY LI G +EG E A +L M + G P + F M
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
L ++ A+ + + MA +P T L+ L K+ EA L
Sbjct: 359 IKGLLNDKLWKDAVSLFK-EMADSGIPDAFTYNILIHWLCQRRKIREALNL 408
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P++++ ++ S ++ ++LAEMR K +A F +++ +KE Y+D
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDA 196
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M I V ++ I SLCKL+ + A +L M G P T+ ++
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G +E A + + G + + C E AL + ++ G VP
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
T L+ G +A EL M+
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMR 344
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 3/261 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +M G V A++ + E ++ E + PN TY
Sbjct: 27 LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN-RNLTPNVVTYT 85
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G ++L++MR+K + P A + L++G K + + +L+ M
Sbjct: 86 VLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y I CK K+S++A + + +++RG +P++ TY LI G KEG L+ A
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 307 KKLFASMT-NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
LF M +G C P++ + C+ G+ + A+ + G P T +L+
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264
Query: 366 GLASISKVAEANELIGLMKKR 386
G ++++ +A +L+ M ++
Sbjct: 265 GFCKLARLDDAYDLLNQMTRK 285
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 6/273 (2%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H++ + N + A + EEM L +V L+ G +E + ++ K
Sbjct: 53 IHALCV---ENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK 109
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
P + TYN +I C++ +S Y +L EM P+ + L+ GF K K +
Sbjct: 110 --KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHL 293
D +V + + G V Y+ I LCK R +EA L M+ G PN TY L
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I GF + G ++ A L M G PD + C+ + A + KG
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T SL+ GL +++++A ++G M+++
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D AM E M + G V L+ G C L++ ++ + + + G+ P+ T+
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR-LDDAYDLLNQMTR-KGLTPDVVTF 294
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ C S IL EMRRKS P + +L G+ + ++ E+ K M+E+
Sbjct: 295 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--MLEE 352
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
V +NI I+ LCK+ RS EA L++ R P++ Y +I G +E ++
Sbjct: 353 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412
Query: 306 AKKLFASM-TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +++ M GC P+S + LC G + A R + KG VP+ T L+
Sbjct: 413 ACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLI 468
Query: 365 TGLASISKVAEANELIGLMKKR 386
++ +A EL+ M +R
Sbjct: 469 DAFRKANRDEDARELLDDMVQR 490
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 6/309 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + L N + + LEE+ R +L N + I + +D A+
Sbjct: 45 DVYTYTAVIHALCVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-GIEPNSETYNKVIKSF 192
+M K + +V N+L+ G ++ E + E VY G P+ TY +I F
Sbjct: 104 LSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEM--VYSGCIPDIFTYTTLITGF 160
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+S S + ++ + RP+ + L+ G KE + ++ + M K G
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220
Query: 253 NV-YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN I C++ + +EA LL+ M G P++ TY L++GF K L+ A L
Sbjct: 221 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 280
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
MT G PD F LC+ A+ + K P T +++ G +
Sbjct: 281 QMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRAN 340
Query: 372 KVAEANELI 380
++ EA + +
Sbjct: 341 QLEEARKFM 349
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I+ C+ L +M K P+ + ++ E++ + K L+ M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ V Y + I LCK R +EA ALL M + + P TY LI G K
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A L M GC PD + + C+ + + AL+V +A+G+ P T L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 364 VTGLASISKVAEANELIGLMKK 385
+ GL ++ EA +L G M K
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIK 213
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ N + A+ EM + +V N +L G + EE ++ E PN
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE---EMDCPPNV 359
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-Q 241
++N +I+ C+ SS ++ E RR+ P+ + ++ G +E K ++ +V +
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M+E+ G Y+ I LC + A+ G + +G PN+ TY LI F K
Sbjct: 420 MLEEPGCLPNSITYSTLITGLCNAGMLDRAR----GYIEKGCVPNIGTYNLLIDAFRKAN 475
Query: 302 NLEGAKKLFASMTNGG 317
E A++L M G
Sbjct: 476 RDEDARELLDDMVQRG 491
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 44/110 (40%)
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY LI G K LE A M + G PD Y + + LC A K
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ P+ T L+ GL +V EA L+ M+K+ + +N+ +
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLI 122
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKY 140
++L +A F +LEE+ P++ +I++ G + N AM+ EE +
Sbjct: 340 NQLEEARKF-----MLEEMDCPPNVVS------FNIMIRGLCKVNRSSEAMELVEEARRR 388
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG--DS 198
V ++ G K +E R++ + + G PNS TY+ +I C +G D
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDR 448
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+ Y K PN + LL+ F K ++ ED ++L M + G
Sbjct: 449 ARGYI------EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 123/280 (43%), Gaps = 3/280 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK-NYEEVKRIFTEFPKVYGIE 179
Y + +ID A+ +G V + NA+L I SK N + +F E + +
Sbjct: 144 YSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQ-SQVS 202
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TYN +I+ FC +G+ M +K PN + L+ G+ K K +D ++
Sbjct: 203 PNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFEL 262
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M G+ + YN+ I LC+ R +E +L M RG + TY LI G+ K
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCK 322
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EGN A + A M G P + + +C+ G A + +G P+ T
Sbjct: 323 EGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERT 382
Query: 360 MKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAAL 398
+LV G + + EA ++ ++ F S +NA +
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 2/305 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+++++ ++ L + IS +L E+ R +E + I Y + A+
Sbjct: 276 ISYNVVINGLCREGRMKEISFVLTEMNKR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM ++GL SV +L+ + N F + +V G+ PN TY ++ F +
Sbjct: 335 EMLRHGLSPSVITYTSLIHSMCKAGNMNRATE-FLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + Y +L EM P+ + L+ G K D VL+ M++ G+ V Y
Sbjct: 394 GYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSY 453
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ + C+ +EA + M+++GIKP+ TY LI GF ++ + A LF M
Sbjct: 454 STVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLR 513
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G PD + + C G+ + A+++ + KG +P T L+ GL ++ E
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTRE 573
Query: 376 ANELI 380
A L+
Sbjct: 574 AKRLL 578
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A F+EM + + +V N L+ G L+ N + R F K G PN TYN
Sbjct: 186 ISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEK-KGCLPNVVTYN 244
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ + +L M K + PN + +++ G +E + +++ VL M K
Sbjct: 245 TLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKR 304
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN I+ CK +A + ML G+ P++ TY LIH K GN+ A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRA 364
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M G P+ + Q G A +V + + G+ P T +L+ G
Sbjct: 365 TEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALING 424
Query: 367 LASISKVAEANELIGLMKKR 386
K+ +A ++ MK++
Sbjct: 425 HCIAGKMVDAIAVLEDMKEK 444
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP-----KVYGI 178
A +D A++ F+ M+K G +V N L+ G Y ++++I F + G+
Sbjct: 218 AGNLDVALRFFDRMEKKGCLPNVVTYNTLIDG------YCKLRKIDDGFELLRSMALKGL 271
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
EPN +YN VI C G + +L EM ++ + + L+ G+ KE +
Sbjct: 272 EPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M + G++ V Y I S+CK A LD M RG+ PN TY L+ GF
Sbjct: 332 MHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFS 391
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
++G + A ++ M + G P + C G+ A+ V KG P
Sbjct: 392 QKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVV 451
Query: 359 TMKSLVTGLASISKVAEA 376
+ ++++G V EA
Sbjct: 452 SYSTVLSGFCRSYDVDEA 469
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 152/358 (42%), Gaps = 56/358 (15%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + + +A + N ++ L++++ R L NER + + + Q ++ A + +
Sbjct: 346 ITYTSLIHSMCKAGNMNRATEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLK 404
Query: 136 EMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM G SV NAL+ G CI K + + + E K G+ P+ +Y+ V+ FC
Sbjct: 405 EMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVL--EDMKEKGLTPDVVSYSTVLSGFCR 462
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE-------------------- 234
S D + +M K I+P+ + L+ GF ++ + +
Sbjct: 463 SYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFT 522
Query: 235 ------------DVGKVLQ----MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
D+ K +Q M+EK G+ V Y++ I L K R+ EAK LL +
Sbjct: 523 YTALINAYCMEGDLQKAIQLHNEMVEK-GVLPDVVTYSVLINGLNKQARTREAKRLLLKL 581
Query: 279 LSRGIKPNLDTYKHLIH---------------GFGKEGNLEGAKKLFASMTNGGCEPDSY 323
P+ TY LI GF +G + A ++F SM +PD
Sbjct: 582 FYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGT 641
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + + C+GG+ A + + + G++ H T+ +LV L KV E N +I
Sbjct: 642 AYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIA 699
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 105/263 (39%), Gaps = 1/263 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ID + M GL ++ + N ++ G +E+ + TE K G
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNK-RGYSL 308
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +IK +C+ G+ + AEM R + P+ + L+ K + L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G+ Y + + EA +L M+ G P++ TY LI+G
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A + M G PD + C+ + + AL+V R +AKG P T
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488
Query: 361 KSLVTGLASISKVAEANELIGLM 383
SL+ G + EA +L M
Sbjct: 489 SSLIQGFCEQRRTKEACDLFDEM 511
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 139/314 (44%), Gaps = 27/314 (8%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
L E++K +L E +++ + L +++ A +EM G+ +V + N ++ G
Sbjct: 222 LFEKMKVSENLMNRESYNIWLLGLVRIGKLLE-AQLVLKEMVDMGMEPNVYSYNIVMDG- 279
Query: 157 ILSKNYEEVK-RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
L KN R+ G+ P++ TY ++ +C +G S ++L EM R P
Sbjct: 280 -LCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSP 338
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N +LL +KE + + ++LQ M + G NI I LC + ++A ++
Sbjct: 339 NNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIV 398
Query: 276 DGMLSRG-----------------------IKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+GM + G P+L +Y +I G K G + AKK F
Sbjct: 399 NGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIE 458
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M +PDS + +F + C+ G+ +A +V + KG T SL+ GL S ++
Sbjct: 459 MMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQ 518
Query: 373 VAEANELIGLMKKR 386
+ E LI M++R
Sbjct: 519 IFEIYGLIDEMRER 532
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 138/310 (44%), Gaps = 4/310 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+F I V +A + +LL E++ R N+ + I + + D A + +E
Sbjct: 93 SFGILVRGYCRAGFTSKGLELLGEMR-RLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDE 151
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIF--TEFPKVYGI-EPNSETYNKVIKSFC 193
M K GL V NA + S E RIF + +V G+ +PN TYN ++ FC
Sbjct: 152 MRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFC 211
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G ++ +M+ N + + L G + K + VL+ M G+ V
Sbjct: 212 KEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVY 271
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + LCK +A+ L+ M S G+ P+ TY L+HG+ G + A + M
Sbjct: 272 SYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM 331
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P++Y + Y L + G A ++ + KG+V T ++ GL + K+
Sbjct: 332 MRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKL 391
Query: 374 AEANELIGLM 383
+A E++ M
Sbjct: 392 DKAIEIVNGM 401
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 45/265 (16%)
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
GC+ ++ + +F + P+ G EPN ++ +++ +C +G +S +L EMRR
Sbjct: 70 GCL-----DDARELFDKMPE-KGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFS 123
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PN + L++ F KE K +D K++ M K G++ V +N RI +LC + EA +
Sbjct: 124 PNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRI 183
Query: 275 LDGMLSRGI----KPNLDTYKHLIHGFGKEGNLEGAKKLF-------------------- 310
M + +PN+ TY ++ GF KEG LE A+ LF
Sbjct: 184 FRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLL 243
Query: 311 ---------------ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
M + G EP+ Y + + LC+ G A + R + G +P
Sbjct: 244 GLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLP 303
Query: 356 HFSTMKSLVTGLASISKVAEANELI 380
T +L+ G KV+EAN ++
Sbjct: 304 DTVTYTTLLHGYCHTGKVSEANNVL 328
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 148/357 (41%), Gaps = 41/357 (11%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
PE+P +++ + ++ + +S L +++ + F+V I L + +D
Sbjct: 15 PENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVL-IGLLCDSGCLD 73
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F++M + G + + L+ G + + + E ++ G PN YN +
Sbjct: 74 DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRL-GFSPNKVVYNTL 132
Query: 189 IKSFCESGDSSSVYSILAEMRRKSI----------------------------------- 213
I SFC+ G + ++ EMR+ +
Sbjct: 133 ISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEV 192
Query: 214 ----RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+PN + L+L GF KE E+ + + M+ YNI + L ++ +
Sbjct: 193 LGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLL 252
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA+ +L M+ G++PN+ +Y ++ G K G L A+ L MT+ G PD+ +
Sbjct: 253 EAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLL 312
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ C G+ A V R M G P+ T L+ L +++EA EL+ M ++
Sbjct: 313 HGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK 369
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 108/226 (47%), Gaps = 5/226 (2%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E K+ F E ++P+S Y+ I SFC+ G SS + +L +M +K + L
Sbjct: 451 EAKKKFIEMMG-KNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSL 509
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G +++ ++ ++ M + G++ V++YN + SLC+ R ++A ++LD ML +GI
Sbjct: 510 IMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGI 569
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
PN+ ++ LI F K + ++F N ++ F L GGE A +
Sbjct: 570 SPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLV-GGEVVKAKE 628
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+ ++ + + K L+ L K+ +A+ G++ K K
Sbjct: 629 LFETALDRSFDVGNFLYKDLIDHLCKDEKLDDAS---GILHKLIDK 671
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 42/277 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D +++S +S L +A + E+ +PD + F +HS G+ I A
Sbjct: 432 DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVF-IHSFCKEGK---ISSA 487
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++M+K G +++ N+L++G E+ + E + G+ P+ YN V+
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEM-RERGVSPDVSIYNNVLS 546
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM-MEKCG-- 247
S CE G S+L EM +K I PN + F +L+ F K + V ++ ++ + CG
Sbjct: 547 SLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHK 606
Query: 248 -------------------------------IASGVNVYNIRIQSLCKLKRSEEAKALLD 276
G +Y I LCK ++ ++A +L
Sbjct: 607 EALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILH 666
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++ +G + ++ +I G GK GN A +L M
Sbjct: 667 KLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 7/173 (4%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ +Y+ +I C++G EM K+++P++ + + + F KE K +V
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ MEK G + YN I L + E L+D M RG+ P++ Y +++ +
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCE 550
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE-------YETALKVC 345
G ++ A + M G P+ F + C+ + +E AL VC
Sbjct: 551 GGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVC 603
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 2/171 (1%)
Query: 210 RKSIRPNATDFGLLLAGFYKEHKY-EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
RK P+ + +++G K + E K ++MM K + +Y++ I S CK +
Sbjct: 426 RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK-NLQPDSAIYDVFIHSFCKEGKI 484
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
A +L M +G L TY LI G G + + L M G PD +
Sbjct: 485 SSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNV 544
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
LC+GG + A V + KG P+ S+ L+ + +E+
Sbjct: 545 LSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEI 595
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I LY + + A++ + M+ G++ ++ + L+ G + K++ +F + K G
Sbjct: 471 INLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVK-DG 529
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN +I++FC G+ + EM+++ RP F ++ GF +
Sbjct: 530 LKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRAL 589
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ MM G V+ +N I L + + E+A +LD M GI PN TY ++HG+
Sbjct: 590 EIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGY 649
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ A + F + G E D Y + C+ G ++AL V R M+ +P
Sbjct: 650 ASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTR-EMSSQKIPRN 708
Query: 358 STMKS-LVTGLASISKVAEANELIGLMKK 385
+ + + L+ G A V EA EL+ MK+
Sbjct: 709 TFVYNILIDGWARRGDVWEAAELMQQMKQ 737
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 150/390 (38%), Gaps = 49/390 (12%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
RLK +N F + + L P+ L +I + N AI + E K R
Sbjct: 510 VRLKDWANAFAVFEDVVKDGLKPDVVLYN---NIIRAFCGMGNMDRAIRTVKEMQKER-- 564
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
R R + I + ++ + A++ F+ M G +V NAL+LG + E+
Sbjct: 565 HRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAV 624
Query: 167 RIFTEFPKVYGIEPNSETYNKV-----------------------------------IKS 191
I E + GI PN TY + +K+
Sbjct: 625 EILDEM-SLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKA 683
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+SG S ++ EM + I N + +L+ G+ + + +++Q M++ G+
Sbjct: 684 CCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPD 743
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
++ Y I + CK + A + M G+KPN+ TY LIHG+ + E A K F
Sbjct: 744 IHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQ 803
Query: 312 SMTNGGCEPDSYCFF-MFTYFLCQGGE-----YETALKVCRASMAKGWVPHFSTMKSLVT 365
M + G +PD + + T L + Y + +CR + T
Sbjct: 804 EMKSAGLKPDKAVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSK 863
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWN 395
L I + EL ++K FP + +N
Sbjct: 864 CLRKIERT--GGELTEALQKTFPPDWNSYN 891
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 2/309 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI V ++ A +E K R N + + I + QA + A
Sbjct: 360 VTYSILVGGFAKIADAEAADHWFKEAKER-HTTLNAIIYGNIIYAHCQACNMTQAEALVR 418
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D + ++ G + N E+ +F K G P+ +Y +I + +
Sbjct: 419 EMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRL-KECGFTPSVISYGCLINLYIKI 477
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S + M I+ N + +L+ GF + + + V + + K G+ V +Y
Sbjct: 478 GKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLY 537
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I++ C + + A + M +P T+ +IHGF + G++ A ++F M
Sbjct: 538 NNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRW 597
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + F L + + E A+++ G P+ T +++ G AS+ +
Sbjct: 598 SGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGK 657
Query: 376 ANELIGLMK 384
A E +K
Sbjct: 658 AFEYFTKLK 666
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 128/329 (38%), Gaps = 47/329 (14%)
Query: 80 IAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID--HAMQTFEEM 137
I + K+S+A +S+++E + +++ +S+++ G + D +A FE++
Sbjct: 475 IKIGKVSKALE---VSKMMEVAGIKHNMK------TYSMLINGFVRLKDWANAFAVFEDV 525
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K GL+ V N ++ N + R E K P + T+ +I F SGD
Sbjct: 526 VKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERH-RPTTRTFMPIIHGFARSGD 584
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYK----------------------EHKYE- 234
I MR P F L+ G + EH Y
Sbjct: 585 MRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTT 644
Query: 235 ---------DVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
D GK + K G+ V Y +++ CK R + A A+ M S+
Sbjct: 645 IMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQK 704
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
I N Y LI G+ + G++ A +L M G +PD + + F C+ G+ + A
Sbjct: 705 IPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRAT 764
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASIS 371
K + G P+ T +L+ G A S
Sbjct: 765 KTIQEMEVVGVKPNIKTYTTLIHGWARAS 793
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 135/349 (38%), Gaps = 50/349 (14%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQS 145
++ ++ A+ Q E +K +P ++ F + + Y + + HA TFE M G+ +
Sbjct: 269 TEPENWQAVVQAFERIK-KPSRKE---FGL-MVTYYARRGDMHHARGTFESMRARGIEPT 323
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
+L+ + ++ EE + K GIE + TY+ ++ F + D+ +
Sbjct: 324 SHVYTSLIHAYAVGRDMEEALSCVRKM-KEEGIEMSLVTYSILVGGFAKIADAEAADHWF 382
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
E + + NA +G ++ + +++ ME+ GI + +++Y+ + +
Sbjct: 383 KEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTII 442
Query: 266 KRSEEAKALLD------------------------GMLSR-----------GIKPNLDTY 290
E+ + D G +S+ GIK N+ TY
Sbjct: 443 GNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTY 502
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
LI+GF + + A +F + G +PD + C G + A++ +
Sbjct: 503 SMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQK 562
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAALP 399
+ P T ++ G A + A E+ +M+ W+ +P
Sbjct: 563 ERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMR---------WSGCIP 602
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 5/266 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+H V +G+ +D A +M YG+ V N+L+ G + +
Sbjct: 360 IHGFVTHGR---LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM- 415
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G +PN +Y ++ FC+ G Y++L EM ++PN F L++ F KEH+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ ++ + M + G V +N I LC++ + A LL M+S G+ N TY L
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I+ F + G ++ A+KL M G D + LC+ GE + A + + G
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 354 VPHFSTMKSLVTGLASISKVAEANEL 379
P + L+ GL V EA E
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEF 621
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 3/257 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIE 179
Y + ++ A++ +M G + +V + L+ G C L K +E + E G++
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK-IDEAYNVLNEM-SADGLK 456
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ +N +I +FC+ I EM RK +P+ F L++G + + + +
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M G+ + YN I + + +EA+ L++ M+ +G + TY LI G +
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G ++ A+ LF M G P + + LC+ G E A++ + + +G P T
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 360 MKSLVTGLASISKVAEA 376
SL+ GL ++ +
Sbjct: 637 FNSLINGLCRAGRIEDG 653
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 6/267 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ N ID A+ +M K+G + L+ E ++ E + G P
Sbjct: 227 FCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM-FLMGCVP 285
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ET+N VI C+ + ++ M + P+ +G L+ G K + + +
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPNLDTYKHLIHGFGK 299
+ K I ++N I R ++AKA+L M+ S GI P++ TY LI+G+ K
Sbjct: 346 YRIPKPEIV----IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG + A ++ M N GC+P+ Y + + C+ G+ + A V A G P+
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
L++ ++ EA E+ M ++
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRK 488
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A EM GL+ + N L+ E IF E P+ G +P+ T+N
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR-KGCKPDVYTFN 498
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I CE + +L +M + + N + L+ F + + ++ K++ M
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G YN I+ LC+ ++A++L + ML G P+ + LI+G + G +E A
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M G PD F LC+ G E L + R A+G P T +L++
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 367 LASISKVAEA 376
L V +A
Sbjct: 679 LCKGGFVYDA 688
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 5/252 (1%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY- 176
I + + + I A++ F EM + G + V N+L+ G +E+K +
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC---EVDEIKHALWLLRDMIS 522
Query: 177 -GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+ N+ TYN +I +F G+ ++ EM + + + L+ G + + +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ + M + G A NI I LC+ EEA M+ RG P++ T+ LI+
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G + G +E +F + G PD+ F +LC+GG A + + G+VP
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 356 HFSTMKSLVTGL 367
+ T L+ +
Sbjct: 703 NHRTWSILLQSI 714
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 130/312 (41%), Gaps = 8/312 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + + KL F I +LL ++K + E + + Y +A + E
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDE-GIVFKESLFISIMRDYDKAGFPGQTTRLMLE 171
Query: 137 M-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M + Y + + N +L + ++ +F + I P T+ V+K+FC
Sbjct: 172 MRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS-RKIPPTLFTFGVVMKAFCAV 230
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ S S+L +M + PN+ + L+ K ++ + ++L+ M G +
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I LCK R EA +++ ML RG P+ TY +L++G K G ++ AK LF +
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP- 349
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVA 374
+P+ F + G + A V + G VP T SL+ G V
Sbjct: 350 ---KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVG 406
Query: 375 EANELIGLMKKR 386
A E++ M+ +
Sbjct: 407 LALEVLHDMRNK 418
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N+L+ G + ++ + +F + + G P++ + N +I C SG EM
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLR-DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ P+ F L+ G + + ED + + ++ GI +N + LCK
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+A LLD + G PN T+ L+ + L+
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 7/262 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK-RIFTEFPKVYGIE 179
Y + + A++ ++EM GL +V L+ G L K E V R F +G+
Sbjct: 273 YCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDG--LCKTDEMVSARKFLIDMASFGVV 330
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN YN +I +C++G+ S S+ +E+ + I P+ + +L+ G + E+ +
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
LQ M+K G YN I CK E+A + M +GI+PN+ T+ LI G+ K
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 300 EGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G +E A L+ M G PD +Y + +F + G + A ++ + G P+
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHF--KDGNTKEAFRLHKEMQEAGLHPNV 508
Query: 358 STMKSLVTGLASISKVAEANEL 379
T+ L+ GL ++++A +L
Sbjct: 509 FTLSCLIDGLCKDGRISDAIKL 530
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 11/296 (3%)
Query: 91 FNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
FN +S+L E K P++ F V I+ + + +++ A+ + +MD + ++ A N
Sbjct: 113 FNVLSRL-ESSKFTPNV-----FGV-LIIAFSEMGLVEEALWVYYKMD---VLPAMQACN 162
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
+L G + ++ + +++ + G PN TY +I C GD + + EM
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDMV-ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
K I P + +L+ G E + + + + M G+ + YN + CK+ ++
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L ML G+ PN+ T+ LI G K + A+K M + G P+ + +
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G AL + +P T L+ GL + ++ EA+ L+ MKK+
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 110/272 (40%), Gaps = 36/272 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM + + +V L+ G E + +F + G+ PN TYN ++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMM 270
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ + EM + PN FG+L+ G K + K L M G+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 250 SGVNVYN-----------------------------------IRIQSLCKLKRSEEAKAL 274
+ VYN I I+ LC + R EEA L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M +G PN TY LI G+ KEGN+E A ++ + MT G EP+ F C+
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
G+ E A+ + + KG +P +L+ G
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 100/259 (38%), Gaps = 14/259 (5%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A + A+ E++K+ + V + L+ G EE + E K G P
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK-KGFLP 401
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN +I +C+ G+ + ++M K I PN F L+ G+ K K E +
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G+ V Y I K ++EA L M G+ PN+ T LI G K+
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 301 GNLEGAKKLFASMTNGG-------------CEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
G + A KLF + T C P+ + LC G A K
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581
Query: 348 SMAKGWVPHFSTMKSLVTG 366
G P T ++ G
Sbjct: 582 MRCSGLRPDVFTCIVIIQG 600
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 115/285 (40%), Gaps = 19/285 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +SI + L + LL+E+K + L ++ I Y + ++ A++
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT-LIDGYCKEGNMEKAIEV 425
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M + G+ ++ + L+ G + E ++TE + G+ P+ Y +I
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV-IKGLLPDVVAYTALIDGHF 484
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI---AS 250
+ G++ + + EM+ + PN L+ G K+ + D K+ + K G S
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGS 542
Query: 251 GVN------------VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
N +Y IQ LC R +A M G++P++ T +I G
Sbjct: 543 KTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHF 602
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+ +L L A + G P+S + + + G ++AL+
Sbjct: 603 RAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY-EEVKRIFTEFPKVYGIE 179
Y + + +++F M + G +V N LL G +L NY + ++ E + +GI
Sbjct: 243 YLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNG-LLKLNYTDRCWEVYEEMER-FGIA 300
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN T+N + C+ GD+ V L +M + P+ + L+ + ++ + +D +
Sbjct: 301 PNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYL 360
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++M + G+ + Y + LCK R EA L M+ RG+ P++ TY LIHG+ K
Sbjct: 361 YKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCK 420
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
EG ++ ++ L M G PDS+ ++ + G++ +AL +
Sbjct: 421 EGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNL 465
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 3/196 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK-RIFTEFPKVYGIEPN 181
+ N D + +EEM+++G+ ++ N +L +L K+ + K F E + G +P+
Sbjct: 280 KLNYTDRCWEVYEEMERFGIAPNLYTFN--ILTHVLCKDGDTGKVNKFLEKMEEEGFDPD 337
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I S+C G + + M R+ + P+ + L+ G KE + + ++
Sbjct: 338 IVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFH 397
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G++ + YN I CK + +E+++LL M+ GI P+ T L+ G+GKEG
Sbjct: 398 RMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEG 457
Query: 302 NLEGAKKLFASMTNGG 317
A L + G
Sbjct: 458 KFLSALNLVVELQRFG 473
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 87/204 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P T N ++ + + + + EM R I PN F +L K+ V
Sbjct: 263 GFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKV 322
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K L+ ME+ G + YN I S C+ R ++A L M RG+ P+L +Y L++G
Sbjct: 323 NKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNG 382
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG + A +LF M + G PD + + C+ G+ + + + + G P
Sbjct: 383 LCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPD 442
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T LV G K A L+
Sbjct: 443 SFTCWVLVEGYGKEGKFLSALNLV 466
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 9/216 (4%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
++ ++K++ G M R P LL G K + + +V + M
Sbjct: 235 VFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEM 294
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E+ GIA + +NI LCK + + L+ M G P++ TY LI+ + ++G L
Sbjct: 295 ERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRL 354
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A L+ M G PD + LC+ G A ++ + +G P T +L
Sbjct: 355 DDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTL 414
Query: 364 VTGLASISKVAEANELIGLMKKRFPKSGDMWNAALP 399
+ G K+ E+ L+ M +WN P
Sbjct: 415 IHGYCKEGKMQESRSLLHDM---------IWNGISP 441
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 122/301 (40%), Gaps = 38/301 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A ++ M + G+ + + AL+ G E ++F G+ P
Sbjct: 348 YCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVH-RGLSP 406
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I +C+ G S+L +M I P++ +L+ G+ KE K+ ++
Sbjct: 407 DIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLV 466
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL-----DG------------------ 277
+++ G++ ++Y+ I +LC+ R AK LL DG
Sbjct: 467 VELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQC 526
Query: 278 ------------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD-SYC 324
M+ + IKPNL TY+ +J + + L M G PD C
Sbjct: 527 DCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASGXLPDLEIC 586
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+F Y C+ + + A + + + + +L+ ++ +A + E+ +M
Sbjct: 587 RALF-YGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMML 645
Query: 385 K 385
K
Sbjct: 646 K 646
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 158/392 (40%), Gaps = 23/392 (5%)
Query: 8 RTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASL 67
+ + N ++ A S +L+AG + + R + K E F ++ G
Sbjct: 380 KDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE-KAFSVIREMIGQGF 438
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMI 127
P D +S ++ L A+ L EE+K R L + + + + +A +I
Sbjct: 439 IP----DTSTYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLI 493
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + F EM + G +V AL+ + +K +F E G PN TY+
Sbjct: 494 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCLPNIVTYSA 552
Query: 188 VIKSFCESGDSSSVYSILAEM----------------RRKSIRPNATDFGLLLAGFYKEH 231
+I C++G I M S RPN +G LL GF K H
Sbjct: 553 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 612
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ E+ K+L M G VY+ I LCK+ + +EA+ + M G L TY
Sbjct: 613 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 672
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI + K + A K+ + M C P+ + LC+ G+ + A K+ + K
Sbjct: 673 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 732
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G P+ T +++ G I K+ EL+ M
Sbjct: 733 GCQPNVVTYTAMIDGFGMIGKIETCLELLERM 764
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F++ D R +V ALL G S EE +++ + G EPN Y+ +I C
Sbjct: 586 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLC 644
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + EM + L+ ++K + + KVL M + A V
Sbjct: 645 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 704
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I LCK+ +++EA L+ M +G +PN+ TY +I GFG G +E +L M
Sbjct: 705 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 764
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ G P+ + + C+ G + A + W H + + ++ G
Sbjct: 765 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 818
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 119/302 (39%), Gaps = 14/302 (4%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
+ S LEEL D R ++ ++ + +A+ +D A EM LR L
Sbjct: 174 SFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 233
Query: 151 ALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
C + K E + + TE P++ Y K+I CE+ L MR
Sbjct: 234 CFAYSLCKVGKWREALTLVETE-----NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR 288
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
S PN + LL G + + +VL MM G ++N + + C
Sbjct: 289 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 348
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN------LEGAKKLFASMTNGGCEPDSY 323
A LL M+ G P Y LI + + L+ A+K ++ M G +
Sbjct: 349 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKI 408
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
FT LC G+YE A V R + +G++P ST ++ L + SK+ A L M
Sbjct: 409 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 468
Query: 384 KK 385
K+
Sbjct: 469 KR 470
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 112/292 (38%), Gaps = 36/292 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + EM ++G ++ ++L+ K + ++ ++ + PN Y
Sbjct: 649 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE-NSCAPNVVIYT 707
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++I C+ G + Y ++ M K +PN + ++ GF K E ++L+ M
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767
Query: 247 GIASGVNVYNIRIQSLCK-------------LKRSE--------------------EAKA 273
G+A Y + I CK +K++ E+
Sbjct: 768 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 827
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY--CFFMFTYF 331
LLD + P L Y+ LI K LE A +L + Y +
Sbjct: 828 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 887
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC + ETA ++ KG +P + SL+ GL SK++EA L+ +
Sbjct: 888 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 939
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 97/279 (34%), Gaps = 42/279 (15%)
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
F+ I +A++ + AM M +V + LL GC+ K KR+
Sbjct: 263 FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM 322
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G P+ + +N ++ ++C SGD S Y
Sbjct: 323 -MMEGCYPSPKIFNSLVHAYCTSGDHSYAY------------------------------ 351
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS------EEAKALLDGMLSRGIKPN 286
K+L+ M KCG G VYNI I S+C K S + A+ ML+ G+ N
Sbjct: 352 -----KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLN 406
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
G E A + M G PD+ + +LC + E A +
Sbjct: 407 KINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 466
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G V T +V + +A + M++
Sbjct: 467 EMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 505
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 15/243 (6%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+ K+ + + + Q++EE +P++ + I +G I+ ++ E M
Sbjct: 712 GLCKVGKTDEAYKLMQMMEEKGCQPNVVT----YTAMIDGFGMIGKIETCLELLERMGSK 767
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G+ + L+ C + + + E + + ++ Y KVI+ F + S
Sbjct: 768 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW-PTHTAGYRKVIEGFNKEFIES- 825
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV-----Y 255
+L E+ + P + + LL+ K + E L+++E+ S V Y
Sbjct: 826 -LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE---MALRLLEEVATFSATLVDYSSTY 881
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I+SLC + E A L M +G+ P + ++ LI G + + A L +++
Sbjct: 882 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 941
Query: 316 GGC 318
C
Sbjct: 942 MVC 944
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 121/261 (46%), Gaps = 3/261 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +M G V A++ + E ++ E + PN TY
Sbjct: 27 LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMAN-RNLTPNVVTYT 85
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G ++L++MR+K + P A + L++G K + + +L+ M
Sbjct: 86 VLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYS 144
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y I CK K+S++A + + +++RG +P++ TY LI G KEG L+ A
Sbjct: 145 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 204
Query: 307 KKLFASMT-NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
LF M +G C P++ + C+ G+ + A+ + G P T +L+
Sbjct: 205 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 264
Query: 366 GLASISKVAEANELIGLMKKR 386
G ++++ +A +L+ M ++
Sbjct: 265 GFCKLARLDDAYDLLNQMTRK 285
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 6/273 (2%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H++ + N + A + EEM L +V L+ G +E + ++ K
Sbjct: 53 IHALCV---ENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK 109
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
P + TYN +I C++ +S Y +L EM P+ + L+ GF K K +
Sbjct: 110 --KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHL 293
D +V + + G V Y+ I LCK R +EA L M+ G PN TY L
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I GF + G ++ A L M G PD + C+ + A + KG
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T SL+ GL +++++A ++G M+++
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEMRRK 320
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 10/262 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D AM E M + G V L+ G C L++ ++ + + + G+ P+ T+
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLAR-LDDAYDLLNQMTR-KGLTPDVVTF 294
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ C S IL EMRRKS P + +L G+ + ++ E+ K M+E+
Sbjct: 295 TSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF--MLEE 352
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
V +NI I+ LCK+ RS EA L++ R P++ Y +I G +E ++
Sbjct: 353 MDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDE 412
Query: 306 AKKLFASM-TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +++ M GC P+S + LC G + A R + KG VP+ T L+
Sbjct: 413 ACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLI 468
Query: 365 TGLASISKVAEANELIGLMKKR 386
++ +A EL+ M +R
Sbjct: 469 DAFRKANRDEDARELLDDMVQR 490
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 130/309 (42%), Gaps = 6/309 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + L N + + LEE+ R +L N + I + +D A+
Sbjct: 45 DVYTYTAVIHALCVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVAL 103
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-GIEPNSETYNKVIKSF 192
+M K + +V N+L+ G ++ E + E VY G P+ TY +I F
Sbjct: 104 LSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEM--VYSGCIPDIFTYTTLITGF 160
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+S S + ++ + RP+ + L+ G KE + ++ + M K G
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220
Query: 253 NV-YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN I C++ + +EA LL+ M G P++ TY L++GF K L+ A L
Sbjct: 221 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 280
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
MT G PD F LC+ A+ + K P T +++ G +
Sbjct: 281 QMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRAN 340
Query: 372 KVAEANELI 380
++ EA + +
Sbjct: 341 QLEEARKFM 349
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 1/202 (0%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I+ C+ L +M K P+ + ++ E++ + K L+ M
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ V Y + I LCK R +EA ALL M + + P TY LI G K
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A L M GC PD + + C+ + + AL+V +A+G+ P T L
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 364 VTGLASISKVAEANELIGLMKK 385
+ GL ++ EA +L G M K
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIK 213
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ N + A+ EM + +V N +L G + EE ++ E PN
Sbjct: 303 RENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE---EMDCPPNV 359
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-Q 241
++N +I+ C+ SS ++ E RR+ P+ + ++ G +E K ++ +V +
Sbjct: 360 VSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRK 419
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M+E+ G Y+ + LC + A+ G + +G PN+ TY LI F K
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAGMLDRAR----GYIEKGCVPNIGTYNLLIDAFRKAN 475
Query: 302 NLEGAKKLFASMTNGG 317
E A++L M G
Sbjct: 476 RDEDARELLDDMVQRG 491
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 44/110 (40%)
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY LI G K LE A M + G PD Y + + LC A K
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ P+ T L+ GL +V EA L+ M+K+ + +N+ +
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLI 122
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKY 140
++L +A F +LEE+ P++ +I++ G + N AM+ EE +
Sbjct: 340 NQLEEARKF-----MLEEMDCPPNVVS------FNIMIRGLCKVNRSSEAMELVEEARRR 388
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG--DS 198
V ++ G K +E R++ + + G PNS TY+ ++ C +G D
Sbjct: 389 RCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDR 448
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+ Y K PN + LL+ F K ++ ED ++L M + G
Sbjct: 449 ARGYI------EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 137/317 (43%), Gaps = 15/317 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL------YGQANMI 127
D FS+ +SKL AN F LL+ +K E+ V +L YG+ +
Sbjct: 78 DLNTFSLMISKLISANQFRLAETLLDRMK-------EEKIDVTEDILLSICRAYGRIHKP 130
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+++ F +M + + + + ++L + + R + + K+ GI P + N
Sbjct: 131 LDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKM-GIPPTVTSLNV 189
Query: 188 VIKSFCE-SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+IK+FC+ SG + M P++ +G L+ G + + ++LQ ME
Sbjct: 190 LIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETK 249
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + V Y I LC+L +EA LL+ M + I+PN+ TY L+ GF K G+ A
Sbjct: 250 GCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRA 309
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + M P+ + LC G+ AL++ +G+ P +V
Sbjct: 310 RDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNC 369
Query: 367 LASISKVAEANELIGLM 383
L +S+ EA + M
Sbjct: 370 LCDVSRFQEAANFLDEM 386
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 8/263 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + +EM+ G SV +++ G N +E R+ + K IEPN TY+
Sbjct: 236 IVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDM-KDKNIEPNVFTYS 294
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC++G SS IL M +K +RPN + LL G E K + ++ M+
Sbjct: 295 SLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQ 354
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN-------LDTYKHLIHGFGK 299
G +Y + LC + R +EA LD M+ GIKPN + T+ +IHG
Sbjct: 355 GFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCT 414
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
N A +L+ S+ G F C + ++ + G +P
Sbjct: 415 INNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEM 474
Query: 360 MKSLVTGLASISKVAEANELIGL 382
++V K +A +L+ L
Sbjct: 475 WSTMVNCFCDERKACDAMKLLQL 497
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 1/211 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G + + T++ +I + ++L M+ + I + + + HK D
Sbjct: 74 GFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDS 133
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V M+ Y + L + + + A M GI P + + LI
Sbjct: 134 IRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKA 193
Query: 297 FGKE-GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F K G ++ A LF +M+N GCEPDSY + LC+ A ++ + KG P
Sbjct: 194 FCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSP 253
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T S++ GL ++ V EA L+ MK +
Sbjct: 254 SVVTYTSIIHGLCQLNNVDEAMRLLEDMKDK 284
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++PN YN +I S C+ + + + +EM + I P+ + L++GF+ K +D
Sbjct: 174 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAI 233
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M I V +NI + CK + +E K + M+ +GIKPN+ TY L+ G+
Sbjct: 234 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 293
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ A +F +M GG PD+ + + C+ + + A+ + + K +P+
Sbjct: 294 CLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV 353
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ GL K++ A +L+ M R
Sbjct: 354 VTYTSLIDGLCKSGKISYALKLVDEMHDR 382
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ +++ A + EM G+ V +AL+ G + ++ +F + + I+P+
Sbjct: 190 KVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMI-LENIKPDV 248
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N ++ FC+ G ++ A M ++ I+PN + L+ G+ + +
Sbjct: 249 YTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNT 308
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G+ YNI I CK+K+ +EA L M + I PN+ TY LI G K G
Sbjct: 309 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGK 368
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ A KL M + G PD + LC+ + + A+
Sbjct: 369 ISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 408
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+Q +D ++ +V N ++ K E +++E GI P+ TY+ +I
Sbjct: 162 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS-EGISPDVVTYSALI 220
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
F G + +M ++I+P+ F +L+ GF K+ K ++ V MM K GI
Sbjct: 221 SGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 280
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y + C +K+ +A ++ + M G+ P+ +Y +I+GF K ++ A L
Sbjct: 281 PNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNL 340
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M P+ + LC+ G+ ALK+ +G P T S++ L
Sbjct: 341 FKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCK 400
Query: 370 ISKVAEANELIGLMKKR 386
+V +A L+ +K +
Sbjct: 401 NHQVDKAIALLTKLKDQ 417
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 9/230 (3%)
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F M K G++ +V +L+ G L K + IF + G+ P++++YN +I F
Sbjct: 270 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQ-GGVNPDTQSYNIMINGF 328
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ ++ +M K+I PN + L+ G K K K++ M G+ +
Sbjct: 329 CKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDI 388
Query: 253 NVYNIRIQSLCKLKRSEEAKALL--------DGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
Y+ + +LCK + ++A ALL + + +G ++ Y +I GF +G
Sbjct: 389 ITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFN 448
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
A L + M + G PD+ + + L + E + A K+ R +A+G +
Sbjct: 449 EALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 9/205 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ A F M + G+ + N ++ G K +E +F + I P
Sbjct: 293 YCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKM-HCKNIIP 351
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I C+SG S ++ EM + + P+ + +L K H+ + +L
Sbjct: 352 NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 411
Query: 241 -----QMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
Q+ E G V Y + IQ C EA ALL M G P+ TY+
Sbjct: 412 TKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEI 471
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGG 317
+I K+ + A+KL M G
Sbjct: 472 IILSLFKKDENDMAEKLLREMIARG 496
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 13/189 (6%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
+ +K+ P +FG +L K + Y + + ME GIAS + NI I +L +
Sbjct: 51 LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110
Query: 268 SEEAKALLDGMLSRGIKPNLDT-------------YKHLIHGFGKEGNLEGAKKLFASMT 314
+ + ++ +L +G PN+ T Y LI+G K G A +L +
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD 170
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
+P+ + +C+ A + +++G P T +L++G + K+
Sbjct: 171 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLK 230
Query: 375 EANELIGLM 383
+A +L M
Sbjct: 231 DAIDLFNKM 239
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 17/209 (8%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGL 142
+ Q N N+I + + PD + ++I++ G + +D AM F++M +
Sbjct: 296 VKQVNKANSIFNTMAQGGVNPDTQS------YNIMINGFCKIKKVDEAMNLFKKMHCKNI 349
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+V +L+ G S ++ E G+ P+ TY+ ++ + C++
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHD-RGVPPDIITYSSILDALCKNHQVDKAI 408
Query: 203 SILAEMRR--------KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
++L +++ K + + +++ GF + + + +L ME G
Sbjct: 409 ALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
Y I I SL K ++ A+ LL M++RG+
Sbjct: 469 YEIIILSLFKKDENDMAEKLLREMIARGL 497
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 14/302 (4%)
Query: 99 EELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQS---VDALNALL 153
E LK RP+ + +I++ + ++ ++ A++ EM K R+S V + L+
Sbjct: 191 EHLKVRPNTC------IFNILVKHHCKSGDLESALEVMHEMKKS--RRSYPNVITYSTLI 242
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
G + +E +F E I P++ TY+ +IK FC G + I+ MR
Sbjct: 243 DGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGC 302
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PN ++ +L+ GF KE + E+ +V M+ G+ Y I C + R +EA
Sbjct: 303 DPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAME 362
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL M K + T+ L+ G +EG + A ++ ++ G + + + FLC
Sbjct: 363 LLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLC 422
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA-NELIGLMKKRFPKSGD 392
Q GE E + + +++G+VPH++T L+ L V A L GL + F
Sbjct: 423 QKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPK 482
Query: 393 MW 394
W
Sbjct: 483 SW 484
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 1/259 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S + L +L EE+ ++ + + + I + D A + E
Sbjct: 236 ITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLIKGFCHGGKADRARKIME 295
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G +V + L+ G EE K +F E K G++P++ Y +I FC
Sbjct: 296 FMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEM-KSSGLKPDTVGYTTLINCFCGV 354
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +L EM + +A F +LL G +E ++++ ++L+ + G+ Y
Sbjct: 355 GRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSY 414
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + LC+ E++ ALL MLSRG P+ T L+ + G ++ A +T
Sbjct: 415 RIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQ 474
Query: 316 GGCEPDSYCFFMFTYFLCQ 334
G P+ + ++C+
Sbjct: 475 MGFTPEPKSWAHLIEYICR 493
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/177 (19%), Positives = 69/177 (38%), Gaps = 1/177 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A + F+EM GL+ L+ +E + E ++ + ++ T+N
Sbjct: 322 LEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEM-KCKADAVTFN 380
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++K C G +L + + + N + ++L ++ + E +L +M
Sbjct: 381 VLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSR 440
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G N + LC+ + A L G+ G P ++ HLI +E L
Sbjct: 441 GFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKL 497
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK---RIFTEFPKVYGIEPNSE 183
+ A + +++ YGL +VD+ NA L ++ N E ++ ++F E YGI N+
Sbjct: 206 LSEARKLLDKLLSYGLVVTVDSCNAFL--SRIANNSEGIEMAIKVFCE----YGISWNTT 259
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+YN +I S C G + +L +M +S P+ + ++ G+ + + K++ M
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALL---------------------------- 275
+ G+ YN I LCK+ +S EA+ +L
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 276 -------DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
D MLS+ I P+ TY LI GFG+ G + + LF M + G +PD +
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ GE A + + G P+ T +L+ GL ++ ANEL+ M+K+
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 116/260 (44%), Gaps = 36/260 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + +EM K GL+ +V N+++ G + N E+ ++ E +V GI+P++ TY
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVAGIDPDAITYT 542
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEK 245
VI ++C GD + +L EM + ++P F +L+ GF ED ++L M+EK
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK 602
Query: 246 ----------------C------------------GIASGVNVYNIRIQSLCKLKRSEEA 271
C G+A N YNI I+ CK + +EA
Sbjct: 603 GIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEA 662
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L M+ +G P + +Y LI F K+ A++LF M G D + F
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 332 LCQGGEYETALKVCRASMAK 351
+ G+ E L +C ++ K
Sbjct: 723 CYEEGDVEITLNLCDEAIEK 742
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 139/326 (42%), Gaps = 4/326 (1%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + ++ + Q L E+ +R L+ +E + I +Y +A + +A
Sbjct: 395 SP-DYITYTTLIQGFGQGGKVIEPQNLFHEMISR-GLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
EM + G+ ++ AL+ G + + E K G++ N YN ++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK-KGLQLNVCIYNSMVN 511
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G+ ++ EM I P+A + ++ + + + K+LQ M G+
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V +N+ + C L E+ LL ML +GI P+ TY L+ ++ K++
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N G PDS + + C+ + A + + + KG+VP ++ +L+
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691
Query: 371 SKVAEANELIGLMKKR-FPKSGDMWN 395
K EA EL M+ G+++N
Sbjct: 692 RKFXEARELFEEMRGHGLVADGEIYN 717
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 140/333 (42%), Gaps = 13/333 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + + H ++ +E+ K PD + I +GQ +
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT----YTTLIQGFGQGGKVIEP 417
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK--RIFTEFPKVYGIEPNSETYNKV 188
F EM GL+ D + L + K E V + E ++ G+ PN TY +
Sbjct: 418 QNLFHEMISRGLKP--DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM-GMTPNIVTYGAL 474
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+ G+ + +L EMR+K ++ N + ++ G K E K+++ ME GI
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y I + C+L ++A LL ML RG++P + T+ L++GF G LE +
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M G PD+ + C T K+ + +G P +T L+ G
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654
Query: 369 SISKVAEANELIG-LMKKRFPKSGDMWNAALPR 400
+ EA L +++K + + +NA + R
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKR 687
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 14/316 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--IDHAM 131
+++I + L + +LL ++ R PD+ +S V+ G ++ + A+
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS------YSTVIDGYCHLGELKKAL 313
Query: 132 QTFEEMDKYGLRQSVDALNAL-LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++M GL+ + N++ LL C + K++E K + + I P++ Y +I
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ--KIIPDNVVYTTLIH 371
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
F + G + EM K I P+ + L+ GF + K + + M G+
Sbjct: 372 GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I CK A +L + M+ G+ PN+ TY LI G K G L+ A +L
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G + + + +C+ G E A+K+ + G P T +++ +
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551
Query: 371 SKVAEANELIGLMKKR 386
+ +A++L+ M R
Sbjct: 552 GDIDKAHKLLQEMLDR 567
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 5/321 (1%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
G L + P D +++S ++ + + LLE+++T+ + N + +I +
Sbjct: 276 GQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQ-GVSPNVISYNSAIDACAK 334
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+ A+ EM GL +V + N+ C ++ + E + E P GI PN+
Sbjct: 335 GDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMP-AQGIAPNTI 393
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+YN + + + G +L M P+ F + + ++E ++L+ M
Sbjct: 394 SYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREM 453
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G+ V YN I++ + R +EA L M +RG+ PN+ TY +I K
Sbjct: 454 PTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQW 513
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A +L M G PD + +G ++E AL++ + +G P + S
Sbjct: 514 ELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSA 573
Query: 364 VTGLASISKVAEANELIGLMK 384
VT A K E +GL+K
Sbjct: 574 VTACA---KSGRWREALGLLK 591
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A++ M G + + N+ + C + +E + E P G+ PN TYN
Sbjct: 409 EKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTA-GLTPNVITYNS 467
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
I++ S + EM + + PN + ++ K ++E ++L M G
Sbjct: 468 AIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARG 527
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+A V YN I++ K ++ E A LL GM +RG KP++ +Y + K G A
Sbjct: 528 VAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREAL 587
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M G P++ + + +G +++ A+++ + G P+ T + +
Sbjct: 588 GLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDAC 647
Query: 368 ASISKVAEANELIGLMKKR 386
A + EA +L+ ++++
Sbjct: 648 AKQGRWKEAVDLLTDLRRQ 666
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 110/272 (40%), Gaps = 1/272 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I G+ AM E+M G+ +V + N+ + C ++E + E V G
Sbjct: 294 IAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTV-G 352
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P +YN + +G +L EM + I PN + L K ++E
Sbjct: 353 LVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAV 412
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+L+ M G + +N I + + ++ E A LL M + G+ PN+ TY I
Sbjct: 413 KLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEAC 472
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G+ + A LF M G P+ + +G ++E A+++ A+G P
Sbjct: 473 GRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDV 532
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+ S + + A +L+ M R PK
Sbjct: 533 ISYNSAIEACGKGEQWELALQLLKGMPTRGPK 564
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 142/385 (36%), Gaps = 72/385 (18%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDL--------------RQNERFHV 115
LD +++IA++ S + +LL E+ T PD+ R E +
Sbjct: 108 LDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDL 167
Query: 116 HS------------IVLYGQA-------NMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
+ +V Y A AM E+M G+ ++ N+ + C
Sbjct: 168 LTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGAC 227
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG-------------------D 197
+ +EE + E + G P++ TYN VI + + G D
Sbjct: 228 AKGRRWEEAMDLLEEVIE-QGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPAD 286
Query: 198 SSSVYSILA----------------EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S S++A +MR + + PN + + K ++++ +L+
Sbjct: 287 VISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLR 346
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ V YN + R EA LL M ++GI PN +Y + K G
Sbjct: 347 EMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGG 406
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
E A KL M+ G +PD F +G ++ETA+++ R G P+ T
Sbjct: 407 QWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYN 466
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
S + ++ EA L M R
Sbjct: 467 SAIEACGRSARWQEAMGLFREMPTR 491
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 8/293 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
++++ A+ ++ + +LL + T PD+ F+ +I G+ + A++
Sbjct: 393 ISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIIS---FN-SAIDACGRGQQWETAVE 448
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EM GL +V N+ + C S ++E +F E P G+ PN TYN +I +
Sbjct: 449 LLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMP-TRGLSPNVVTYNSMIDAC 507
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ +L M + + P+ + + K ++E ++L+ M G +
Sbjct: 508 AKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDI 567
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN + + K R EA LL M + G+ PN +Y IH GK + A ++
Sbjct: 568 ISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKE 627
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
M G P+ + + G ++ A+ + +G P T ++++
Sbjct: 628 MQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVIS 680
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 102/263 (38%), Gaps = 5/263 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF-PKVYGIEPNSETYNKV 188
A++ EM G+ V N+ + C ++E + T+ GI P+ TYN
Sbjct: 129 AVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSA 188
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I + G +L +M + + PN + + K ++E+ +L+ + + G
Sbjct: 189 IAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGF 248
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
YN I + K R EA LL ML+ I ++ +Y +I G+ + A
Sbjct: 249 PPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMD 308
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M G P+ + +G ++ AL + R G VP + S A
Sbjct: 309 LLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACA 368
Query: 369 SISKVAEANELIGLMKKRFPKSG 391
+ EA EL+ K P G
Sbjct: 369 VNGRWVEALELL----KEMPAQG 387
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK---RIFTEFPKVYGIEPNSE 183
+ A + +++ YGL +VD+ NA L ++ N E ++ ++F E YGI N+
Sbjct: 206 LSEARKLLDKLLSYGLVVTVDSCNAFL--SRIANNSEGIEMAIKVFCE----YGISWNTT 259
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+YN +I S C G + +L +M +S P+ + ++ G+ + + K++ M
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALL---------------------------- 275
+ G+ YN I LCK+ +S EA+ +L
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379
Query: 276 -------DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
D MLS+ I P+ TY LI GFG+ G + + LF M + G +PD +
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ GE A + + G P+ T +L+ GL ++ ANEL+ M+K+
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKK 497
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 4/326 (1%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + ++ + Q L E+ +R L+ +E + I +Y +A + +A
Sbjct: 395 SP-DYITYTTLIQGFGQGGKVIEPQNLFHEMISR-GLKPDEVTYTTLIDVYCKAGEMVNA 452
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
EM + G+ ++ AL+ G + + E K G++ N YN ++
Sbjct: 453 FSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK-KGLQLNVCIYNSMVN 511
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G+ ++ EM I P+A + ++ + + + K+LQ M G+
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V +N+ + C L E+ LL ML +GI P+ TY L+ ++ K++
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N G PDS + + C+ + A + + + KG+VP ++ +L+
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691
Query: 371 SKVAEANELIGLMKKR-FPKSGDMWN 395
K+ EA EL M+ G+++N
Sbjct: 692 KKILEARELFEEMRGHGLVADGEIYN 717
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 36/260 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + +EM K GL+ +V N+++ G + N E+ ++ E +V GI+P++ TY
Sbjct: 484 LDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEM-EVAGIDPDAITYT 542
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEK 245
VI ++C GD + +L EM + ++P F +L+ GF ED ++L M+EK
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK 602
Query: 246 ----------------C------------------GIASGVNVYNIRIQSLCKLKRSEEA 271
C G+A N YNI I+ CK + +EA
Sbjct: 603 GIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEA 662
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L M+ +G P + +Y LI F K+ + A++LF M G D + F
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 332 LCQGGEYETALKVCRASMAK 351
+ G+ E L +C ++ K
Sbjct: 723 CYEEGDVEITLNLCDEAIEK 742
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 140/333 (42%), Gaps = 13/333 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + + H ++ +E+ K PD + I +GQ +
Sbjct: 362 DNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYIT----YTTLIQGFGQGGKVIEP 417
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK--RIFTEFPKVYGIEPNSETYNKV 188
F EM GL+ D + L + K E V + E ++ G+ PN TY +
Sbjct: 418 QNLFHEMISRGLKP--DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQM-GMTPNIVTYGAL 474
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+ G+ + +L EMR+K ++ N + ++ G K E K+++ ME GI
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y I + C+L ++A LL ML RG++P + T+ L++GF G LE +
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M G PD+ + C T K+ + +G P +T L+ G
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654
Query: 369 SISKVAEANELIG-LMKKRFPKSGDMWNAALPR 400
+ EA L +++K + + +NA + R
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKR 687
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 14/316 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--IDHAM 131
+++I + L + +LL ++ R PD+ +S V+ G ++ + A+
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS------YSTVIDGYCHLGELKKAL 313
Query: 132 QTFEEMDKYGLRQSVDALNAL-LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++M GL+ + N++ LL C + K++E K + + I P++ Y +I
Sbjct: 314 KLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ--KIIPDNVVYTTLIH 371
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
F + G + EM K I P+ + L+ GF + K + + M G+
Sbjct: 372 GFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKP 431
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I CK A +L + M+ G+ PN+ TY LI G K G L+ A +L
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G + + + +C+ G E A+K+ + G P T +++ +
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRL 551
Query: 371 SKVAEANELIGLMKKR 386
+ +A++L+ M R
Sbjct: 552 GDIDKAHKLLQEMLDR 567
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 119/264 (45%), Gaps = 2/264 (0%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M K G + +L+ G L EE + + ++ GI+P+ Y +I S C++
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM-GIKPDVVMYTTIIDSLCKN 190
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + S+ +M IRP+ + L+ G ++ D +L+ M K I V +
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITF 250
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N I + K + +A+ L + M+ I PN+ TY LI+GF EG ++ A+++F M
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC PD + C+ + + A+K+ KG + T +L+ G + K
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 376 ANELIGLMKKR-FPKSGDMWNAAL 398
A E+ M R P + +N L
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 1/263 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
N ++ AM +M + G++ V ++ + + +F + YGI P+
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN-YGIRPDVV 213
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
Y ++ C SG S+L M ++ I+P+ F L+ F KE K+ D ++ M
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ IA + Y I C +EA+ + M ++G P++ Y LI+GF K +
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A K+F M+ G ++ + Q G+ A +V +++G P+ T L
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ L KV +A + M+KR
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKR 416
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 2/217 (0%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
++ G+ + T N ++ FC+S S L +M + P+ F L+ GF ++
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E+ ++ M + GI V +Y I SLCK A +L D M + GI+P++ Y L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
++G G A L MT +PD F + G++ A ++ +
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
P+ T SL+ G V EA ++ LM+ + FP
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 136/318 (42%), Gaps = 11/318 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ V+ L + + LL + K +PD+ F+ + +D A
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT---FNALIDAFVKEGKFLD-A 266
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + EM + + ++ +L+ G + +E +++F + G P+ Y +I
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY-LMETKGCFPDVVAYTSLIN 325
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC+ I EM +K + N + L+ GF + K +V M G+
Sbjct: 326 GFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPP 385
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSR---GIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YN+ + LC + ++A + + M R G+ PN+ TY L+HG G LE A
Sbjct: 386 NIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKAL 445
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+F M + + + +C+ G+ + A+ + + +KG P+ T ++++GL
Sbjct: 446 MVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Query: 368 ASISKVAEANELIGLMKK 385
EA+ L MK+
Sbjct: 506 FREGLKHEAHVLFRKMKE 523
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D AM+ F EM + GL + L+ G + +F+ G+ PN TYN
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS-RGVPPNIRTYN 391
Query: 187 KVIKSFCESGDSSSVYSILAEMRRK---SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
++ C +G I +M+++ + PN + +LL G K E V + M
Sbjct: 392 VLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
K + G+ Y I IQ +CK + + A L + S+G+KPN+ TY +I G +EG
Sbjct: 452 RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLK 511
Query: 304 EGAKKLFASMTNGG 317
A LF M G
Sbjct: 512 HEAHVLFRKMKEDG 525
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +++++ S + + M P+ DF LL K K++ V + ++
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G++ + N+ + C+ + A + L M+ G +P++ T+ LI+GF +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M G +PD + LC+ G AL + G P SLV
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 365 TGLASISKVAEANELIGLMKKR 386
GL + + +A+ L+ M KR
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKR 241
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/182 (17%), Positives = 81/182 (44%), Gaps = 11/182 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
+ + ++ + Q N ++ + +R P++R +H + G+ + A
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL-LHCLCYNGK---VKKA 406
Query: 131 MQTFEEMDKY---GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ FE+M K G+ ++ N LL G + E+ +F + K ++ TY
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK-REMDIGIITYTI 465
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+ C++G + ++ + K ++PN + +++G ++E + + + M++ G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Query: 248 IA 249
++
Sbjct: 526 VS 527
>gi|357120336|ref|XP_003561883.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62590-like [Brachypodium distachyon]
Length = 525
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A NAL+ + +EV R+F P P + + +I S SG + + +
Sbjct: 48 AYNALMSAYSRAGRPDEVLRLFRFLP----FHPTARIFTTLISSLAASGRPMAARAAFSS 103
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
+ + P A+ F LL + + + + +V M + VYN I LC +R
Sbjct: 104 LIVSGLTPTASAFTALLKSY--DSSLDAMYQVFLAMAAARCSPDAAVYNCYISVLCDSQR 161
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
EEA+ LD M+ G++P + +Y ++ G+ ++G + A+KL M + GC+PD + +
Sbjct: 162 LEEARGFLDHMVDEGVRPTVRSYTTILRGYCQQGKILEAEKLVDDMVDAGCQPDVVSYSV 221
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC E++ ++ R S KGW P+ T ++GL + + + +M+ R
Sbjct: 222 LIEGLCSVREFDKVERILRESEDKGWTPNAITYNIYMSGLCRTGLLDDTFRQVDIMRSR 280
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 5/210 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P +Y +++ +C+ G ++ +M +P+ + +L+ G +++ V
Sbjct: 176 GVRPTVRSYTTILRGYCQQGKILEAEKLVDDMVDAGCQPDVVSYSVLIEGLCSVREFDKV 235
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ E G YNI + LC+ ++ +D M SRG+ P ++T L
Sbjct: 236 ERILRESEDKGWTPNAITYNIYMSGLCRTGLLDDTFRQVDIMRSRGLLPTVETVNILFDC 295
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++ A L G D +C+ LC G++ K+ + KG P
Sbjct: 296 LCRDSRFSEAVLLLEHSEELGWHADVFCYNTLMGRLCDIGDFARVFKLLVDLLKKGIGPD 355
Query: 357 FSTMKSLVTGLASISK--VAEA---NELIG 381
+ + GL K VAE NE IG
Sbjct: 356 MFSFTIAIRGLCGAGKHRVAECLIDNESIG 385
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 124/313 (39%), Gaps = 14/313 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A++ +S S+A + + +L L P R + S+ G+ A F
Sbjct: 48 AYNALMSAYSRAGRPDEVLRLFRFLPFHPTARIFTTL-ISSLAASGRPMA---ARAAFSS 103
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEE-VKRIFTEFPKVYG--IEPNSETYNKVIKSFC 193
+ GL + A ALL K+Y+ + ++ F + P++ YN I C
Sbjct: 104 LIVSGLTPTASAFTALL------KSYDSSLDAMYQVFLAMAAARCSPDAAVYNCYISVLC 157
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S L M + +RP + +L G+ ++ K + K++ M G V
Sbjct: 158 DSQRLEEARGFLDHMVDEGVRPTVRSYTTILRGYCQQGKILEAEKLVDDMVDAGCQPDVV 217
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y++ I+ LC ++ ++ + +L +G PN TY + G + G L+ + M
Sbjct: 218 SYSVLIEGLCSVREFDKVERILRESEDKGWTPNAITYNIYMSGLCRTGLLDDTFRQVDIM 277
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G P + LC+ + A+ + S GW +L+ L I
Sbjct: 278 RSRGLLPTVETVNILFDCLCRDSRFSEAVLLLEHSEELGWHADVFCYNTLMGRLCDIGDF 337
Query: 374 AEANE-LIGLMKK 385
A + L+ L+KK
Sbjct: 338 ARVFKLLVDLLKK 350
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 115/283 (40%), Gaps = 12/283 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +++S+ + L F+ + ++L E + D ++I + G + ++D
Sbjct: 215 DVVSYSVLIEGLCSVREFDKVERILRESE---DKGWTPNAITYNIYMSGLCRTGLLDDTF 271
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ + M GL +V+ +N +L C+ + + E + G + YN ++
Sbjct: 272 RQVDIMRSRGLLPTVETVN-ILFDCLCRDSRFSEAVLLLEHSEELGWHADVFCYNTLMGR 330
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ GD + V+ +L ++ +K I P+ F + + G K+ V + L ++ I
Sbjct: 331 LCDIGDFARVFKLLVDLLKKGIGPDMFSFTIAIRGLCGAGKHR-VAECL--IDNESIGYD 387
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V +N I C K M SR I PN T+ LI + A A
Sbjct: 388 VVAFNTLIHGFCIAGDLRGVKLTYMNMYSRQISPNNYTHALLIDSLFNDRKFVEAIDTLA 447
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
S+ + G PD FL +G ++ L + +G+V
Sbjct: 448 SLRD-GLVPDH--LIHLNNFLAKGIKFTKVLNLLDEIRYRGFV 487
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 139/313 (44%), Gaps = 9/313 (2%)
Query: 77 AFSIAVSKLSQAN-HFNAISQL--LEELKTRPDLRQNERFHVHSIVLYGQANM-IDHAMQ 132
AFS +S ++ H AIS ++E RP+L + I G+ M +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVT----YNAVIDACGKGGMEFKQVAK 325
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+EM + ++ N+LL C +E + +F E IE + +YN ++ +
Sbjct: 326 FFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRR-IEQDVFSYNTLLDAI 384
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G + ILA+M K I PN + ++ GF K ++++ + M IA
Sbjct: 385 CKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDR 444
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN + K+ RSEEA +L M S GIK ++ TY L+ G+GK+G + KK+FA
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAE 504
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M P+ + +GG Y+ A++V R + G +L+ L
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 373 VAEANELIGLMKK 385
V A LI M K
Sbjct: 565 VGSAVSLIDEMTK 577
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A D A+ F EM + + N LL EE I E V GI+
Sbjct: 419 FAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GIKK 477
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN ++ + + G V + AEM+R+ + PN + L+ G+ K Y++ +V
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVF 537
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ + G+ + V +Y+ I +LCK A +L+D M GI PN+ TY +I FG+
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 301 GNLEGAKKLFASMTNGGCEP 320
+E + A +NGG P
Sbjct: 598 ATMERS----ADYSNGGSLP 613
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 36/183 (19%)
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ + G + V ++ I + + EEA ++ + M G++PNL TY +I
Sbjct: 254 RIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC 313
Query: 298 GKEGN------------------------------------LEGAKKLFASMTNGGCEPD 321
GK G E A+ LF M+N E D
Sbjct: 314 GKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQD 373
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + +C+GG+ + A ++ AK +P+ + +++ G A + EA L G
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 382 LMK 384
M+
Sbjct: 434 EMR 436
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 12/315 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--ID 128
D A++ +S + N A +Q+L +K R PD+ ++I++ N +
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIV------TYNIMIGSLCNRRKLG 189
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ +++ +V L+ I+ E ++ E G+ P+ TYN +
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNAI 248
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I+ C+ G ++ + K +P+ + +LL F + K+++ K++ M G
Sbjct: 249 IRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 308
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y+I I SLC+ R +EA ++L M+ + + P+ +Y LI KEG L+ A
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ M + GC PD + LC+ G AL++ G P+ S+ ++++ L
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 428
Query: 369 SISKVAEANELIGLM 383
S + A ++ M
Sbjct: 429 SCGDRSRALGMVPAM 443
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 2/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A + ++ E + G V L+ G KN E+ R+ EP+
Sbjct: 80 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES--HTEPDV 137
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN VI FC+ + +L M+ + P+ + +++ K KVL
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ V Y I I++ EA LL+ ML+RG+ P++ TY +I G KEG
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A +L S+T+ GC+PD + + G+++ K+ ++G P+ T
Sbjct: 258 VERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 317
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L++ L ++ EA ++ +M ++
Sbjct: 318 LISSLCRFGRIDEAISVLKVMIEK 341
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 133/307 (43%), Gaps = 14/307 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ ++I + N +LLEE+ R PD+ + ++ ++ G + M++ A
Sbjct: 208 ITYTILIEATIVEGGINEAMKLLEEMLARGLLPDM------YTYNAIIRGMCKEGMVERA 261
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVI 189
+ + G + V + N LL + ++E +++ E F + G EPN TY+ +I
Sbjct: 262 AELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR--GCEPNKVTYSILI 319
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C G S+L M K + P+ + L++ KE + + ++ M G
Sbjct: 320 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 379
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN + +LCK + +A + + + G PN+ +Y +I G+ A +
Sbjct: 380 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 439
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+M + G +PD + LC+ G E A+ + G+ P + ++ GL
Sbjct: 440 VPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 499
Query: 370 ISKVAEA 376
+ ++ +A
Sbjct: 500 VRRIDDA 506
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 10/244 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT--RPDLRQNERFHVHSIVLYGQANMIDHAM 131
+++ +SI +S L + F I + + LK +L + + I + +D A+
Sbjct: 311 NKVTYSILISSLCR---FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 367
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ M G + N +L + N + IF + + G PN +YN +I +
Sbjct: 368 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL-RGMGCPPNVSSYNTMISA 426
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
GD S ++ M K + P+ + L++ ++ E+ +L ME+ G
Sbjct: 427 LWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 486
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG----NLEGAK 307
V YNI + LCK++R ++A + M+ +G +PN TY LI G G G +E A
Sbjct: 487 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELAN 546
Query: 308 KLFA 311
LF+
Sbjct: 547 SLFS 550
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 12/294 (4%)
Query: 95 SQLLEELK--TRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNA 151
S+++E L+ T PD+ F ++++ + + N I+ A Q M G + N
Sbjct: 123 SRVMEILESHTEPDV-----FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYN- 176
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
+++G + ++ + + + P TY +I++ G + +L EM +
Sbjct: 177 IMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 236
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ P+ + ++ G KE E +++ + G V YNI +++ + +E
Sbjct: 237 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEG 296
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ L+ M SRG +PN TY LI + G ++ A + M PD+Y +
Sbjct: 297 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 356
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC+ G + A+ + ++ G +P ++ LA++ K AN+ + + K
Sbjct: 357 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI---LAALCKNGNANQALEIFNK 407
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 1/194 (0%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
K++ C++G + L + K P+ L+ GF+ E +V++++E
Sbjct: 73 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES- 131
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I CK+ R E A +L+ M +RG P++ TY +I L A
Sbjct: 132 HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 191
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+ + C P + + G A+K+ +A+G +P T +++ G
Sbjct: 192 LKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 251
Query: 367 LASISKVAEANELI 380
+ V A ELI
Sbjct: 252 MCKEGMVERAAELI 265
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 28/190 (14%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNAL---LLGCILSKNYEEVKRIFTEFPKVY-- 176
G AN A++ F ++ G +V + N + L C + R P +
Sbjct: 396 GNAN---QALEIFNKLRGMGCPPNVSSYNTMISALWSC------GDRSRALGMVPAMISK 446
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED- 235
G++P+ TYN +I C G +L +M + RP + ++L G K + +D
Sbjct: 447 GVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 506
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK----------- 284
+G +M+EK G Y + I+ + EA L + + SR +
Sbjct: 507 IGMFAEMIEK-GCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKT 565
Query: 285 -PNLDTYKHL 293
P LD YK L
Sbjct: 566 FPMLDVYKEL 575
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 8/315 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + F+I V L +A +F L+ ++ + L H ++ ++ G + + +D A+
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL---PNLHTYNTLICGLLRVHRLDDAL 418
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT-EFPKVYGIEPNSETYNKVIK 190
+ F M+ G++ + A ++ K+ + V + T E K GI PN N +
Sbjct: 419 ELFGNMESLGVKPT--AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
S ++G I ++ + P++ + +++ + K + ++ K+L M + G
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V V N I +L K R +EA + M +KP + TY L+ G GK G ++ A +LF
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M GC P++ F LC+ E ALK+ M G VP T +++ GL
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 371 SKVAEANELIGLMKK 385
+V EA MKK
Sbjct: 657 GQVKEAMCFFHQMKK 671
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 122/284 (42%), Gaps = 21/284 (7%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI------ 157
RP L+ V G+ ID M +EM+ GL+ +V CI
Sbjct: 220 RPSLQTYSSLMVG----LGKRRDIDSVMGLLKEMETLGLKPNVYTFTI----CIRVLGRA 271
Query: 158 --LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+++ YE +KR+ E G P+ TY +I + C + + +M+ +P
Sbjct: 272 GKINEAYEILKRMDDE-----GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKP 326
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + LL F + V + MEK G V + I + +LCK EA L
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
D M +GI PNL TY LI G + L+ A +LF +M + G +P +Y + +F + +
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
G+ +AL+ KG P+ + + LA + EA ++
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 129/314 (41%), Gaps = 4/314 (1%)
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK-YG 141
S L++A NA+S E L R + V I + N + A FE+ K G
Sbjct: 722 SILAEAGIDNAVS-FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLG 780
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
++ + N L+ G + + E + +F + K G P+ TYN ++ ++ +SG +
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQV-KSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQ 260
+ + EM N ++++G K +D + +M + Y I
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L K R EAK L +GML G +PN Y LI+GFGK G + A LF M G P
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D + + LC G + L + G P ++ GL ++ EA L
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 381 GLMKKRFPKSGDMW 394
MK + D++
Sbjct: 1020 NEMKTSRGITPDLY 1033
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 137/314 (43%), Gaps = 12/314 (3%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQT 133
F+I + L +A N ++L+ + PD+ + I A +D A +
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT----YTVLIDALCTARKLDCAKEV 315
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
FE+M K G R D + + L S N + VK+ ++E K G P+ T+ ++ +
Sbjct: 316 FEKM-KTG-RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD-GHVPDVVTFTILVDA 372
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++G+ + L MR + I PN + L+ G + H+ +D ++ ME G+
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
Y + I K S A + M ++GI PN+ ++ K G AK++F
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G PDS + M + GE + A+K+ M G P + SL+ L
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKAD 552
Query: 372 KVAEANELIGLMKK 385
+V EA ++ MK+
Sbjct: 553 RVDEAWKMFMRMKE 566
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 6/224 (2%)
Query: 167 RIFTEFPKVY------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
R TE +VY G P+ +TY+ ++ + D SV +L EM ++PN F
Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+ + + K + ++L+ M+ G V Y + I +LC ++ + AK + + M +
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
KP+ TY L+ F +L+ K+ ++ M G PD F + LC+ G +
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
A +G +P+ T +L+ GL + ++ +A EL G M+
Sbjct: 382 AFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 5/252 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEE-MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
H+IV+ G +A +D A+ + + M + L+ G S E K++F E
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF-EG 916
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
YG PN YN +I F ++G++ + ++ M ++ +RP+ + +L+ +
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYK 291
++ + +++ G+ V YN+ I L K R EEA L + M SRGI P+L TY
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G G +E A K++ + G EP+ + F G+ E A V + +
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 352 GWVPHFSTMKSL 363
G+ P+ T + L
Sbjct: 1097 GFSPNTGTYEQL 1108
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 1/247 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG++ ID + ++EM + + N ++ G + + N ++ ++ + P
Sbjct: 830 YGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 889
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I +SG + M RPN + +L+ GF K + + +
Sbjct: 890 TACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALF 949
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G+ + Y++ + LC + R +E + G+ P++ Y +I+G GK
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKS 1009
Query: 301 GNLEGAKKLFASM-TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
LE A LF M T+ G PD Y + L G E A K+ G P+ T
Sbjct: 1010 HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Query: 360 MKSLVTG 366
+L+ G
Sbjct: 1070 FNALIRG 1076
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 3/228 (1%)
Query: 160 KNYEEVKRIFTEFPKVYG---IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
K++ + F+ F V G + +ET N ++++ G + + M+++ I+ +
Sbjct: 93 KSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRD 152
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ + + + L+ M + G YN I L K + EA +
Sbjct: 153 TNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYR 212
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M+ G +P+L TY L+ G GK +++ L M G +P+ Y F + L + G
Sbjct: 213 RMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ A ++ + +G P T L+ L + K+ A E+ MK
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 7/181 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++I ++ +A +A L + + RPDL+ V + + G+ +D + F
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL-VDCLCMVGR---VDEGLHYF 984
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+E+ + GL V N ++ G S EE +F E GI P+ TYN +I +
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+G I E++R + PN F L+ G+ K E V Q M G +
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 255 Y 255
Y
Sbjct: 1105 Y 1105
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 157/330 (47%), Gaps = 10/330 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
LD ++SI + + + + + S+L+E EL P +E + I +
Sbjct: 255 LDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVP----SEGTYAAVIGACVRLGNFGE 310
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ +EM + +V +L+ G + + R+F E +V G+ PN ++ +I
Sbjct: 311 ALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEV-GVTPNVAIFSVLI 369
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + G+ + M+ ++P LL GF K++ E+ +L + GIA
Sbjct: 370 EWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA 429
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
S V YNI + LC+L + EA L D M+ +GI P+L +Y H+I G K+G ++ A ++
Sbjct: 430 SVVT-YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEV 488
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ G +P++ + + + G+ E A + +A G VP T S++ GL
Sbjct: 489 MNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCK 548
Query: 370 ISKVAEA-NELIGLMKKRFPKSGDMWNAAL 398
+ +V+EA ++L +K+ F + +N +
Sbjct: 549 VGRVSEARDKLNTFIKQSFIPTSMTYNCII 578
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 1/253 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+HA F++M G+ + N+++ G E + F K I P S TYN
Sbjct: 518 EHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFI-PTSMTYNC 576
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I + + G S S+ EM R I PN + L+ GF K +K + K+ M++ G
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + VY I CK++ E A +L G+ PN Y +I + N+E A
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAAL 696
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M N D + L + G+ AL + + +G VP L+ GL
Sbjct: 697 NLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGL 756
Query: 368 ASISKVAEANELI 380
+ ++ A +++
Sbjct: 757 CNHGQLENAGKIL 769
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 83/189 (43%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN TY +I FC+S + +M+RK + + T + L+AGF K E+
Sbjct: 602 ISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENAC 661
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K + + G+ VYNI I + L E A L M++ I +L Y LI G
Sbjct: 662 KFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGL 721
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KEG L A L++ M G PD + + + LC G+ E A K+ + P
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTV 781
Query: 358 STMKSLVTG 366
+L+ G
Sbjct: 782 LLYNTLIAG 790
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P+ +YN +I C+ G + ++ + ++PNA + +L+ G +K+ E
Sbjct: 461 GITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHA 520
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M GI +N I LCK+ R EA+ L+ + + P TY +I G
Sbjct: 521 FNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDG 580
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ KEG ++ A+ ++ M P+ + C+ + + ALK+ KG
Sbjct: 581 YVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELD 640
Query: 357 FSTMKSLVTGLASISKVAEA 376
+ +L+ G + + A
Sbjct: 641 ITVYATLIAGFCKMQDMENA 660
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 1/222 (0%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
R ++ N + I + ++N +D A++ ++M + GL + L+ G ++ E
Sbjct: 599 RSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDME 658
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+ F++ +V G+ PN+ YN +I ++ + + ++ EM I + + L
Sbjct: 659 NACKFFSKLLEV-GLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSL 717
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ G KE K + M GI + +YN+ I LC + E A +L M I
Sbjct: 718 IDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNI 777
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
P + Y LI G KEGNL+ A +L M + G PD +
Sbjct: 778 TPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTY 819
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 77/187 (41%), Gaps = 6/187 (3%)
Query: 196 GDSSSVYSILAEM------RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
GDS+ +L E+ R ++ F LL + + +K + + + M + G+
Sbjct: 125 GDSAPAAKVLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVV 184
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V N+ + ++ + E+A L D M R I + T + L+ K G A++
Sbjct: 185 PWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERY 244
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F G + D+ + + +C+G + + A K+ GWVP T +++
Sbjct: 245 FGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVR 304
Query: 370 ISKVAEA 376
+ EA
Sbjct: 305 LGNFGEA 311
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 107/293 (36%), Gaps = 37/293 (12%)
Query: 93 AISQLLEELKTRPDLR-QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNA 151
+ +LL E R + + R + ++ Y +AN I A++ F M + G+ V +N
Sbjct: 133 VLVELLVECAERYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNV 192
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
LL I E+ R+F E M +
Sbjct: 193 LLTAMIRRNMVEDAHRLFDE------------------------------------MAER 216
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
I + +L+ K K+ + + G+ Y+I IQ++C+ + A
Sbjct: 217 RIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLA 276
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L++G G P+ TY +I + GN A +L M + +
Sbjct: 277 SKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKG 336
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
C G+ +AL++ + G P+ + L+ + I V +ANEL MK
Sbjct: 337 YCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMK 389
>gi|38344321|emb|CAE02149.2| OSJNBa0058K23.3 [Oryza sativa Japonica Group]
gi|38345611|emb|CAD41894.2| OSJNBa0093O08.13 [Oryza sativa Japonica Group]
Length = 368
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 4/295 (1%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+S+ + +L+ F+ + +LL + R ++ F I +YG AN + A++T
Sbjct: 74 YSMMIDRLASCRRFSDVEELLARARAE-RFRFSDEFFYRLIKMYGNVANHPEKAIETLFA 132
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M Y S N +L + + YE V ++ ++ G+ ++ +N ++K C+ G
Sbjct: 133 MPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRL-GVTLDTCCFNILVKGLCQFG 191
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+L EM ++ PN T + L+ + + + ++ + M+K I + VYN
Sbjct: 192 KFGDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYN 251
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I LC+ +R EA L M+ +G PN TY+ L+ G G AK L + M
Sbjct: 252 ILIAGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAE 311
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS-TMKSLVTGLASI 370
P F + LC + A V + + +G+VP T+ L +GL I
Sbjct: 312 RMRPGFSSFKLLIDGLCSVNCLDDAHLVLKQMVEQGFVPRLIFTLIVLPSGLPII 366
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ F +L + +YE V +V + G+ +NI ++ LC+ + +A +L
Sbjct: 140 PSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISL 199
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M +G PN+ TY L++ + G ++ A +L M D+ + + LC+
Sbjct: 200 LYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIVADAVVYNILIAGLCR 259
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
A + ++ + KG P+ T + L+ GL S K EA L+ +M+ + G
Sbjct: 260 EQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMMRAERMRPG 316
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 186 NKVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N+++K F D S + S R+ +PN + +++ ++ DV ++L
Sbjct: 39 NELLKIFANIRDPSLITSSFKRACDRRDYKPNEALYSMMIDRLASCRRFSDVEELLARAR 98
Query: 245 KCGIASGVNVYNIRIQSLCKL-----KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
A + L K+ E+A L M P+ T+ +++H
Sbjct: 99 ----AERFRFSDEFFYRLIKMYGNVANHPEKAIETLFAMPGYNCWPSTKTFNYVLHMLVC 154
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ E +++ S + G D+ CF + LCQ G++ A+ + +G VP+ +T
Sbjct: 155 KRQYEVVHEVYLSASRLGVTLDTCCFNILVKGLCQFGKFGDAISLLYEMPKQGCVPNVTT 214
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+L+ L +V +A EL M+K
Sbjct: 215 YSTLMNFLCQHGQVDKAFELCERMQK 240
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 8/285 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMIDH 129
LD++++ ++ L +A A+++LL +L+ +PD+ +H + + +
Sbjct: 196 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTI-IHCLC---KNKRVGD 251
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM G+ +V N L+ G + N +E + E K+ I P+ T+N +I
Sbjct: 252 ACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEM-KLKNINPDVYTFNILI 310
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + G S+ EM+ K++ PN + L+ G K H E + + M++ GI
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I + +LCK R E AK +L +G N+ TY +I+G K G L
Sbjct: 371 PDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ M GC PD+ F L + E + A K R +A+G +
Sbjct: 431 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V GI PN TYN +I FC G+ +S+L EM+ K+I P+ F +L+ KE K +
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ + + M+ + + Y I LCK E A AL M +GI+P++ +Y L+
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 380
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K G LE AK+ F + G + + + LC+ G + + + KG +
Sbjct: 381 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCM 440
Query: 355 PHFSTMKSLVTGL 367
P T K+++ L
Sbjct: 441 PDAITFKTIICAL 453
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 116/259 (44%), Gaps = 5/259 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNK 187
+ F++ G+ ++ LN +L+ C + + F+ F + G P++ T N
Sbjct: 112 VISLFKQFQSNGVTPNLCTLN-ILINCFC--HLAHITFAFSVFANILKRGYHPDAITLNT 168
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+IK C G+ ++ + + + +G L+ G K + + V ++L+ +E
Sbjct: 169 LIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHS 228
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V +Y I LCK KR +A L M+ +GI PN+ TY LI+GF GNL+ A
Sbjct: 229 VKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAF 288
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M PD Y F + L + G+ + A+ + K P+ T SL+ GL
Sbjct: 289 SLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGL 348
Query: 368 ASISKVAEANELIGLMKKR 386
+ A L MK++
Sbjct: 349 CKNHHLERAIALCKKMKEQ 367
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 176 YGIEPNSETYNKVIKSFCES---GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ ++P+ Y +I C++ GD+ +YS EM K I PN + L+ GF
Sbjct: 227 HSVKPDVVMYTTIIHCLCKNKRVGDACDLYS---EMIVKGISPNVFTYNTLIYGFCIMGN 283
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
++ +L M+ I V +NI I +L K + +EA +L + M + + PN+ TY
Sbjct: 284 LKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTS 343
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI G K +LE A L M G +PD Y + + LC+GG E A + + + KG
Sbjct: 344 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403
Query: 353 WVPHFSTMKSLVTGLASISKVAEANEL 379
+ + T ++ GL + +L
Sbjct: 404 YHLNVRTYNVMINGLCKAGLFGDVMDL 430
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-YGIEPNSETY 185
I+ A++ + ++ + G+R S+ A N++L GC+ + E + + E K + N+ET
Sbjct: 172 IEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETV 231
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I++FC+SG + Y +L + + + P + L+AGF + Y + +VL M
Sbjct: 232 GCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIA 291
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+ Y I LCK + EA + + + RG P+ Y +IHG + G+
Sbjct: 292 RNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGE 351
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A+KL+ M + G +P++Y + + + G++E A ++ KG+ T +++
Sbjct: 352 ARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIIS 411
Query: 366 GLASISKVAEANELIGLMKK 385
L S K EA E+ M +
Sbjct: 412 ELCSRGKSDEAFEVFKKMSE 431
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + F++M + G++ N+L+ G +E + E +P+ Y
Sbjct: 420 DEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELV-AQDPQPSVSLYEL 478
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ GD + +L +M K + PNA + +L G K +E V ++ G
Sbjct: 479 LIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKG 538
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ N I LC +S+EA + M GIK + TY LI GF KEG + +
Sbjct: 539 YGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSM 598
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L + G +P + + LCQ G+ E+A ++ ++KG PH + + L++GL
Sbjct: 599 NLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGL 658
Query: 368 ASISKVAEA-NELIGLMKKRF-PK 389
+ E + L+G+++ + PK
Sbjct: 659 CKQGRATEGMDRLMGMLENKIKPK 682
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 146/321 (45%), Gaps = 10/321 (3%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM 126
L P +P ++ ++ QA ++ ++S++L + R L + + ++ G
Sbjct: 259 LDPGNP----TYNKLIAGFCQAKNYASMSEVLHTMIARNHL---PTIYTYQEIINGLCKN 311
Query: 127 ID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ A + F ++ G ++ G ++ E ++++ E G++PN+ T
Sbjct: 312 EECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMD-KGMQPNAYT 370
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN ++ +SGD + EM K +++ K ++ +V + M
Sbjct: 371 YNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMS 430
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ GI + YN I+ CK + +E LL+ ++++ +P++ Y+ LI K+G+ E
Sbjct: 431 ETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFE 490
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
AK+L M++ G P++Y + + + G++E ++ + KG+ +T ++
Sbjct: 491 AAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKII 550
Query: 365 TGLASISKVAEANELIGLMKK 385
+ L S K EA+E+ M +
Sbjct: 551 SELCSRGKSDEASEMFKKMSE 571
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 3/227 (1%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ G P+S + + +K C G + +++ IR + +L+G K K E
Sbjct: 149 IAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTE 208
Query: 235 DVGKVLQMMEKCGIASGVNVYNIR--IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ + Q M K G AS N + IQ+ C + LL+ L G+ P TY
Sbjct: 209 LLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNK 268
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI GF + N ++ +M P Y + LC+ E A +V +G
Sbjct: 269 LIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRG 328
Query: 353 WVPHFSTMKSLVTGLASISKVAEANEL-IGLMKKRFPKSGDMWNAAL 398
+ P +++ GL + EA +L +M K + +N L
Sbjct: 329 YAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTML 375
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFE 135
+ + + K + F A +LL ++ ++ L N + + +L+G ++ +H + +
Sbjct: 476 YELLIIKSCKDGDFEAAKRLLGDMSSK-GLHPNA--YTYDTMLHGSLKSGDFEHVRELYN 532
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
E G + N ++ +E +F + + GI+ ++ TYN +I+ FC+
Sbjct: 533 ETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSET-GIKADAITYNSLIRGFCKE 591
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++L E+ + ++P+A+ + L+ + E ++ M GI N+
Sbjct: 592 GKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLR 651
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
I LCK R+ E L GML IKP ++ L
Sbjct: 652 EHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDL 689
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 130/315 (41%), Gaps = 7/315 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ + L +AN + +L E+L+ + ++ I+ YG A D A
Sbjct: 299 DDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTM-IMGYGSAGKFDEAYGL 357
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E G SV A N +L + EE RIF E + PN TYN +I C
Sbjct: 358 LERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR--DAVPNVPTYNILIDMLC 415
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G ++ I +M R + PN +++ K K E+ + + M+
Sbjct: 416 REGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAV 475
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++ I L K R ++A +L + ML G P Y LI F K G E K++ M
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535
Query: 314 TNGGCEPDSYCFFMFTYFLC--QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ GC PD + TY C + GE E + R A G++P + L+ GL
Sbjct: 536 VHTGCSPD--LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 593
Query: 372 KVAEANELIGLMKKR 386
E EL MK++
Sbjct: 594 LANETYELFYAMKEQ 608
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 5/264 (1%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F E++ +G + + L+ G + + E +F K G ++ YN VI FC
Sbjct: 567 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM-KEQGCVLDTHAYNAVIDGFC 625
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG + Y +L EM+ K P +G ++ G K + ++ + + + GI V
Sbjct: 626 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 685
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VY+ I K+ R +EA +++ ++ +G+ PN+ T+ L+ K + A F SM
Sbjct: 686 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 745
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ C P+ + + LC+ ++ A + G P+ T ++++GLA +
Sbjct: 746 KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 805
Query: 374 AEANELIGLMKKRFPKSGDMWNAA 397
EA+ L RF +G + ++A
Sbjct: 806 LEASGLFS----RFKANGGIPDSA 825
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 7/319 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D ++SI + L +A N +L +K + + H ++ V+ G ++ ++ A
Sbjct: 578 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDT---HAYNAVIDGFCKSGKVNKAY 634
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q EEM G +V +++ G +E +F E K GI+ N Y+ +I
Sbjct: 635 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSNGIKLNVVVYSSLIDG 693
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
F + G Y I+ E+ +K + PN + LL K + + Q M+
Sbjct: 694 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 753
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
Y+I I LC++++ +A M G+KPN TY +I G K GN+ A LF+
Sbjct: 754 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFS 813
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G PDS + L + A + + KG H T L+ L +
Sbjct: 814 RFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK-A 872
Query: 372 KVAEANELIGLMKKRFPKS 390
+ E ++G + K KS
Sbjct: 873 ECLEQAAIVGAVLKETAKS 891
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 3/246 (1%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++EM G + +N + C+ E R +G P++ +Y+ +I
Sbjct: 530 KIYKEMVHTGCSPDLTLINTYM-DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
++G ++ Y + M+ + + + ++ GF K K ++L+ M+ G
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y I L K+ R +EA L + S GIK N+ Y LI GFGK G ++ A +
Sbjct: 649 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 708
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASI 370
+ G P+ Y + L + E AL +C SM P+ T L+ GL +
Sbjct: 709 ELMQKGLTPNVYTWNCLLDALVKAEEINEAL-ICFQSMKDLKCPPNQITYSILINGLCRV 767
Query: 371 SKVAEA 376
K +A
Sbjct: 768 RKFNKA 773
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 106/240 (44%), Gaps = 1/240 (0%)
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
+A N+LL+ + ++ ++RI E + G P+S +++ + +S + I+
Sbjct: 126 EAYNSLLMVMARNTEFDHLERILEEM-SLSGFGPSSNISIELVANCVKSRKLREAFDIIQ 184
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
MR+ RP + + +L+ + + + + + M++ G V+++ I+ +
Sbjct: 185 TMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREG 244
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R + A +LLD M S + ++ Y I FGK G ++ + K F M + G PD +
Sbjct: 245 RVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYT 304
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A+++ VP +++ G S K EA L+ K +
Sbjct: 305 SMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK 364
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 127/344 (36%), Gaps = 28/344 (8%)
Query: 60 DICCGASLAP-------------ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
D+CC P E PL + + + +L AN Q E
Sbjct: 65 DVCCILESGPWGPTLENSLSALGEKPLPELVIGV-LKRLKDANTAVNYFQWAE------- 116
Query: 107 LRQNERFHVHS-----IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
+Q E+ H +++ + DH + EEM G S + L+ C+ S+
Sbjct: 117 -KQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRK 175
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
E I K + P Y +I + E + + + +M+ N F
Sbjct: 176 LREAFDIIQTMRK-FKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFT 234
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ F +E + + +L M+ + + + +YN+ I K + + + M S
Sbjct: 235 TLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSH 294
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G+ P+ TY +I K L+ A +LF + P +Y + G+++ A
Sbjct: 295 GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 354
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ AKG +P ++T L +V EA + MK+
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR 398
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 5/259 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE--EVKRIFTEFPKVYGIEPNSET 184
+D ++ +E+ GL+ N ++L +L KN E E +++ K +G+ P++
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIIL--LLCKNGEVVEAEQLLRGMRK-WGVFPDNVV 349
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y VI FC+ G+ S+ + EMRRK I P+ + ++ G K K + ++ M
Sbjct: 350 YTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEML 409
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ Y I CK +EA ++ + M+ +G+ PN+ TY L G K G ++
Sbjct: 410 VKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEID 469
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +L M+ G +P+ Y + LC+ G E +K+ G+ P T +L+
Sbjct: 470 VANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLM 529
Query: 365 TGLASISKVAEANELIGLM 383
+ ++A+A+EL+ +M
Sbjct: 530 DAYCKMGEMAKAHELLRIM 548
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 153/368 (41%), Gaps = 61/368 (16%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV--------------HSIV--L 120
+ I V +N +L+ E +P + ++ FH+ H +V L
Sbjct: 117 SLCIVVHLSVASNDIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDL 176
Query: 121 YGQA----NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK---RIFTEFP 173
Y Q + A + F ++ +YG+ SVD+ N L LS N+E +K ++F EFP
Sbjct: 177 YFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFL--SRLSCNFEGIKIAVKVFEEFP 234
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEM------------------------- 208
++ G+ N+ + N V+ C+ G +++L +M
Sbjct: 235 EL-GVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGEL 293
Query: 209 ----------RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+ K ++P+ + ++ K + + ++L+ M K G+ VY
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTV 353
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I CKL A L D M + I P++ TY +IHG K G + A+++F M G
Sbjct: 354 ISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGL 413
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
EPD + C+ GE + A V + KG P+ T +L GL ++ ANE
Sbjct: 414 EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANE 473
Query: 379 LIGLMKKR 386
L+ M ++
Sbjct: 474 LLHEMSRK 481
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 3/274 (1%)
Query: 115 VHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
V++ V+ G + + A + F+EM + + + +++ G S E + +F E
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
V G+EP+ TY +I +C++G+ +S+ +M +K + PN + L G K +
Sbjct: 409 -LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ ++L M + G+ V YN + LCK+ E+ L++ M G P+ TY
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTT 527
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
L+ + K G + A +L M N +P F + C G E ++ + KG
Sbjct: 528 LMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+P+ +T SL+ + + E+ M R
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDR 621
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 134/306 (43%), Gaps = 8/306 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ +S + + +A +L +E++ + PD+ +H I G+ M++ A
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSV-IHGICKSGK--MVE-A 401
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F EM GL AL+ G + +E + + + G+ PN TY +
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ-KGLTPNVVTYTALAD 460
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C++G+ +L EM RK ++PN + ++ G K E K+++ M+ G
Sbjct: 461 GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y + + CK+ +A LL ML++ ++P L T+ L++GF G LE ++L
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLI 580
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G P++ F C ++ +A +G +P +T L+ G
Sbjct: 581 EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKA 640
Query: 371 SKVAEA 376
+ EA
Sbjct: 641 RNMKEA 646
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A + A +M + GL +V AL G + + + E + G++P
Sbjct: 427 YCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR-KGLQP 485
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN ++ C+ G+ ++ EM P+ + L+ + K + ++L
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++M + + +N+ + C E+ + L++ ML +GI PN T+ L+ + +
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
N+ +++ +M + G PDS + + C+ + A + + + KG+ +T
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATY 665
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G K EA +L M+K
Sbjct: 666 DALIRGFYKRKKFVEARKLFEEMRKH 691
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A + EM + GL+ +V N ++ G N E+ ++ E + G P++ TY
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM-DLAGFYPDTITYT 526
Query: 187 KVIKSFCESGDSSSVYSIL-----------------------------------AEMRRK 211
++ ++C+ G+ + + +L M K
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
I PNAT F L+ + ++ ++ + M G+ N YNI I+ CK + +EA
Sbjct: 587 GIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEA 646
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG--CEPDSYCFFMFT 329
L M+ +G TY LI GF K A+KLF M G E D Y F+
Sbjct: 647 WFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDV 706
Query: 330 YFLCQGGEYETALKVCRASMAK 351
+ + G +E L++C M +
Sbjct: 707 NY--EEGNWEITLELCDEFMTE 726
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ + + GLR N LL C N + ++F + + + +P+ TYN +I
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMI 339
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ G ++ + E+ K P+A + LL F +E E V +V Q M+K G
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 250 --------------------------------SGVN----VYNIRIQSLCKLKRSEEAKA 273
SG N Y + I SL K R+ EA A
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L+ ML GIKP L TY LI G+ K G E A+ F+ M G +PD+ + + L
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+G E A + R ++ G P ++ + ++ GL
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLYELMILGL 553
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 5/282 (1%)
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQ----TFEEMDKYGLRQSVDALNALLLGCILSKNY 162
+R V SI + A +D ++ EE+ G + S ++ +L + N
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EVK+I++ K G P Y +I+ C+ +++EM + + +
Sbjct: 874 FEVKKIYSSM-KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+L + Y+ +V Q +++ G+ YN I C+ +R EE L+ M + G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P LDTYK LI FGK+ LE A++LF + + G + D + G A
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
K+ + G P +TM L+ +S EA +++ +K
Sbjct: 1053 KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 141/341 (41%), Gaps = 13/341 (3%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
I LKS ILD A L +P D + V + Q + A+ ++ E L R
Sbjct: 134 ILSLKSNQFVADILD----ARLVQMTPTD---YCFVVKSVGQESWQRAL-EVFEWLNLRH 185
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
N R + + G+ N A++ F + + V NA++ S + +
Sbjct: 186 WHSPNARMVAAILGVLGRWNQESLAVEIFTRAEP-TVGDRVQVYNAMMGVYSRSGKFSKA 244
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI-LAEMRRKS-IRPNATDFGLL 223
+ + + G P+ ++N +I + +SG + ++ L +M R S +RP+A + L
Sbjct: 245 QELVDAM-RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L+ ++ + KV + ME + YN I + + EA+ L + +G
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ TY L++ F +E N E K+++ M G D + + + G+ + AL+
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 344 VCRASMA-KGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + G P T L+ L ++ EA L+ M
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S Y +I+++ + S++ +R+ P+ + L++ + + YE +
Sbjct: 752 SPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFN 811
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + G + V NI + +LC R EE +++ + G K + + ++ F + G
Sbjct: 812 TMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAG 871
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
N+ KK+++SM G P + M LC+G
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 905
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D M ++ + + + QL +++K + + I G+AN A
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM G++ ++ +AL+ G + EE + F+ + G +P++ Y+ ++
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLL 519
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGI 248
++ + + +M P+ T + L++ G KE++ +D+ K ++ ME+ CG+
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGM 575
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 93/253 (36%), Gaps = 36/253 (14%)
Query: 112 RFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
R + I L + + A EM++ + + N++L ++Y++ +++
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQR 952
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G+EP+ TYN +I +C Y ++ +MR + P + L++ F K+
Sbjct: 953 I-KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
Query: 232 KYE-----------------------------DVG------KVLQMMEKCGIASGVNVYN 256
E D G K+LQMM+ GI + +
Sbjct: 1012 CLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ + S +EA+ +L + ++ Y +I + + + + M
Sbjct: 1072 LLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKE 1131
Query: 317 GCEPDSYCFFMFT 329
G EPD + F
Sbjct: 1132 GLEPDHRIWTCFV 1144
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 7/271 (2%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL-LGCILSKNYEEVKRIFTEFPKVY 176
I Y +++ I+ A + F+EM K G+ V +++ C + +KR F F ++
Sbjct: 265 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNC----KFGNMKRAFVLFDEMT 320
Query: 177 G--IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ PN+ TY +I C++G+ + ++ +M+ K + N F L+ G+ K+ +
Sbjct: 321 ERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMID 380
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ ++ +M++ G NI C+ R EEAK LL M RG+ PN+ ++ LI
Sbjct: 381 EALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILI 440
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ KE N A++LF M G P + F C+ G+ E A K+ +G +
Sbjct: 441 DIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM 500
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T SL+ G + V A EL M +
Sbjct: 501 PDTYTYTSLIDGERASGNVDRALELFNEMPQ 531
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 146/339 (43%), Gaps = 25/339 (7%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN-ER--------FHVHSIV 119
P D A I S+L +A F + +L+ + +L N ER F+ SIV
Sbjct: 58 PSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIV 117
Query: 120 ---------LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+Y M D +++ F+ K G + LL S N E +
Sbjct: 118 EKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNME----LCV 173
Query: 171 EFPKVY---GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
EF + GIE ++ V+ C+ G+ +++ E+ K +P+ + LL G+
Sbjct: 174 EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGY 233
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ V ++L +MEK + V Y + I+ + + EEA+ L D ML +GI+P++
Sbjct: 234 IEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDV 293
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
Y +I+ K GN++ A LF MT P++Y + C+ GE + A +
Sbjct: 294 YIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVND 353
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+KG + +L+ G + EA L +M+++
Sbjct: 354 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 392
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G E ++ T N + FC S +L M + + PN F +L+ + KE + +
Sbjct: 393 GFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEA 452
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ ++MEK G A V YN I+ CK + EEA L++ M RG+ P+ TY LI G
Sbjct: 453 RRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 512
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
GN++ A +LF M G + + + L + G + A K+ +G VP
Sbjct: 513 ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 572
Query: 357 FSTMKSLVTGLASISKVAEANE 378
SL+ L + + E
Sbjct: 573 DGIYSSLIASLHKVGPLVSGLE 594
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TYN ++ + E D V IL+ M + + N T + +L+ + + K E+
Sbjct: 218 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 277
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ M K GI V +Y I CK + A L D M R + PN TY LI+G
Sbjct: 278 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 337
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G ++ A+ + M + G + + F C+ G + AL++ KG+
Sbjct: 338 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 397
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T + +G ++ EA L+ M++R
Sbjct: 398 AFTCNIIASGFCRSNRREEAKRLLLTMEER 427
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 7/271 (2%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL-LGCILSKNYEEVKRIFTEFPKVY 176
I Y +++ I+ A + F+EM K G+ V +++ C + +KR F F ++
Sbjct: 269 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNC----KFGNMKRAFVLFDEMT 324
Query: 177 G--IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ PN+ TY +I C++G+ + ++ +M+ K + N F L+ G+ K+ +
Sbjct: 325 ERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMID 384
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ ++ +M++ G NI C+ R EEAK LL M RG+ PN+ ++ LI
Sbjct: 385 EALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILI 444
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ KE N A++LF M G P + F C+ G+ E A K+ +G +
Sbjct: 445 DIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM 504
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T SL+ G + V A EL M +
Sbjct: 505 PDTYTYTSLIDGERASGNVDRALELFNEMPQ 535
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 146/339 (43%), Gaps = 25/339 (7%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN-ER--------FHVHSIV 119
P D A I S+L +A F + +L+ + +L N ER F+ SIV
Sbjct: 62 PSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIV 121
Query: 120 ---------LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+Y M D +++ F+ K G + LL S N E +
Sbjct: 122 EKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNME----LCV 177
Query: 171 EFPKVY---GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
EF + GIE ++ V+ C+ G+ +++ E+ K +P+ + LL G+
Sbjct: 178 EFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGY 237
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ V ++L +MEK + V Y + I+ + + EEA+ L D ML +GI+P++
Sbjct: 238 IEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDV 297
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
Y +I+ K GN++ A LF MT P++Y + C+ GE + A +
Sbjct: 298 YIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVND 357
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+KG + +L+ G + EA L +M+++
Sbjct: 358 MQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQK 396
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G E ++ T N + FC S +L M + + PN F +L+ + KE + +
Sbjct: 397 GFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEA 456
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ ++MEK G A V YN I+ CK + EEA L++ M RG+ P+ TY LI G
Sbjct: 457 RRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDG 516
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
GN++ A +LF M G + + + L + G + A K+ +G VP
Sbjct: 517 ERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPD 576
Query: 357 FSTMKSLVTGLASISKVAEANE 378
SL+ L + + E
Sbjct: 577 DGIYSSLIASLHKVGPLVSGLE 598
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TYN ++ + E D V IL+ M + + N T + +L+ + + K E+
Sbjct: 222 GFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEA 281
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ M K GI V +Y I CK + A L D M R + PN TY LI+G
Sbjct: 282 EKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALING 341
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G ++ A+ + M + G + + F C+ G + AL++ KG+
Sbjct: 342 ACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEID 401
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T + +G ++ EA L+ M++R
Sbjct: 402 AFTCNIIASGFCRSNRREEAKRLLLTMEER 431
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ + + GLR N LL C N + ++F + + + +P+ TYN +I
Sbjct: 281 AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMI 339
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ G ++ + E+ K P+A + LL F +E E V +V Q M+K G
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFG 399
Query: 250 --------------------------------SGVN----VYNIRIQSLCKLKRSEEAKA 273
SG N Y + I SL K R+ EA A
Sbjct: 400 KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAA 459
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L+ ML GIKP L TY LI G+ K G E A+ F+ M G +PD+ + + L
Sbjct: 460 LMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLL 519
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+G E A + R ++ G P ++ + ++ GL
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLYELMILGL 553
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 121/282 (42%), Gaps = 5/282 (1%)
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQ----TFEEMDKYGLRQSVDALNALLLGCILSKNY 162
+R V SI + A +D ++ EE+ G + S ++ +L + N
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EVK+I++ K G P Y +I+ C+ +++EM + + +
Sbjct: 874 FEVKKIYSSM-KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+L + Y+ +V Q +++ G+ YN I C+ +R EE L+ M + G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ P LDTYK LI FGK+ LE A++LF + + G + D + G A
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
K+ + G P +TM L+ +S EA +++ +K
Sbjct: 1053 KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLK 1094
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 141/341 (41%), Gaps = 13/341 (3%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
I LKS ILD A L +P D + V + Q + A+ ++ E L R
Sbjct: 134 ILSLKSNQFVADILD----ARLVQMTPTD---YCFVVKSVGQESWQRAL-EVFEWLNLRH 185
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
N R + + G+ N A++ F + + V NA++ S + +
Sbjct: 186 WHSPNARMVAAILGVLGRWNQESLAVEIFTRAEP-TVGDRVQVYNAMMGVYSRSGKFSKA 244
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI-LAEMRRKS-IRPNATDFGLL 223
+ + + G P+ ++N +I + +SG + ++ L +M R S +RP+A + L
Sbjct: 245 QELVDAM-RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTL 303
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L+ ++ + KV + ME + YN I + + EA+ L + +G
Sbjct: 304 LSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF 363
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ TY L++ F +E N E K+++ M G D + + + G+ + AL+
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 344 VCRASMA-KGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + G P T L+ L ++ EA L+ M
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 69/154 (44%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S Y +I+++ + S++ +R+ P+ + L++ + + YE +
Sbjct: 752 SPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFN 811
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + G + V NI + +LC R EE +++ + G K + + ++ F + G
Sbjct: 812 TMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAG 871
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
N+ KK+++SM G P + M LC+G
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 905
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D M ++ + + + QL +++K + + I G+AN A
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM G++ ++ +AL+ G + EE + F+ + G +P++ Y+ ++
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLL 519
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGI 248
++ + + +M P+ T + L++ G KE++ +D+ K ++ ME+ CG+
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGM 575
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/253 (18%), Positives = 93/253 (36%), Gaps = 36/253 (14%)
Query: 112 RFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
R + I L + + A EM++ + + N++L ++Y++ +++
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQR 952
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G+EP+ TYN +I +C Y ++ +MR + P + L++ F K+
Sbjct: 953 I-KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQK 1011
Query: 232 KYE-----------------------------DVG------KVLQMMEKCGIASGVNVYN 256
E D G K+LQMM+ GI + +
Sbjct: 1012 CLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMH 1071
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ + S +EA+ +L + ++ Y +I + + + + M
Sbjct: 1072 LLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKE 1131
Query: 317 GCEPDSYCFFMFT 329
G EPD + F
Sbjct: 1132 GLEPDHRIWTCFV 1144
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 5/324 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +I ++ + + +L E++ L + I Y + + +D A Q E
Sbjct: 71 ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE 130
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
E V A+ ++ G ++ +E ++ + + +P+ +N +I FC++
Sbjct: 131 E--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKA 188
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV- 254
G Y +L + PNA + L+ GF K + ++ +++ + NV
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248
Query: 255 -YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N I LCK R E A L+ M +R ++ + TY L+ G K+G ++F M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P + + C+ G + A +V R+ +AKG P +T L+ GL KV
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368
Query: 374 AEANELI-GLMKKRFPKSGDMWNA 396
A E ++++R P +++A
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSA 392
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 15/312 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
+R FS+ ++ L +A + ++ R P+LR + QA +D A
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLL----LASLCQAGKMDQA 57
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M F + SV LN L+ G + ++ +F E K + + P + TY +IK
Sbjct: 58 MAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIK 114
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-VLQMMEKCGIA 249
+C+ +L E + + GF K + ++ + +L M+EK
Sbjct: 115 CYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAK 172
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +N+ I CK R EA +L+ ++S G PN TY LI GF K GNL A +L
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232
Query: 310 FASMT--NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
F ++ + EP+ F LC+ E A ++ + A+ T +L+ GL
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Query: 368 ASISKVAEANEL 379
+ +E + +
Sbjct: 293 CKQGRTSEVSRV 304
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 13/315 (4%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQA 124
+L PE+ ++ + + + + QLLEE ++ + S+ + +A
Sbjct: 101 ALVPEA----TTYTAIIKCYCKMDRLDQARQLLEE----SSCCSSDVIAITSVARGFCKA 152
Query: 125 NMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+D A Q +M +K + + A N ++ G + E + + G PN+
Sbjct: 153 QRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSM-GCVPNAV 211
Query: 184 TYNKVIKSFCESGDSSSVYSILAEM--RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TY +I FC+SG+ S + + R PN F L++G K + E ++++
Sbjct: 212 TYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVK 271
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M+ + + Y + LCK R+ E + + ML G P++ TY L+H K G
Sbjct: 272 QMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAG 331
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+L+ A+++ SM G PD + + L + G+ TA + + + P
Sbjct: 332 SLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYS 391
Query: 362 SLVTGLASISKVAEA 376
+LV G + V EA
Sbjct: 392 ALVRGCCKAALVDEA 406
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 130/302 (43%), Gaps = 13/302 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLL----EELKTRPDLRQNERFHVHSIVLYG--QANMI 127
D +A + +A + QLL E+ +PD+ +++++G +A +
Sbjct: 138 DVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIV------AWNVIIHGFCKAGRV 191
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP-KVYGIEPNSETYN 186
A + E + G + L+ G S N E ++F + + EPN T+N
Sbjct: 192 REAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFN 251
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++ + ++ +M+ + +R + + L+ G K+ + +V +V + M +
Sbjct: 252 ALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLRE 311
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V Y + + CK ++A+ ++ M+++GI P++ TY L+ G + G + A
Sbjct: 312 GCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTA 371
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ F + C P + + C+ + A+K + + P +T K LV
Sbjct: 372 TEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEM 431
Query: 367 LA 368
L
Sbjct: 432 LC 433
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ ++HA + ++M LR L+ G EV R+F E + G P+
Sbjct: 259 KADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLR-EGCNPSV 317
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ- 241
TY ++ + C++G ++ M K I P+ T + +LL G ++ K + +
Sbjct: 318 VTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEK 377
Query: 242 -MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ E+C + VY+ ++ CK +EA ML R + P+ T K L+ K
Sbjct: 378 ILRERCPPCA--VVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435
Query: 301 GNLE 304
G +
Sbjct: 436 GRTD 439
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 103/276 (37%), Gaps = 69/276 (25%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN T++ +I C++G +M + PN D LLLA + K + +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 240 ----------------------LQMMEKC-----------GIASGVNVYNIRIQSLCKLK 266
LQ+++K + Y I+ CK+
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 267 RSEEAKALLD------------GMLSRGI----------------------KPNLDTYKH 292
R ++A+ LL+ ++RG KP++ +
Sbjct: 121 RLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR--ASMA 350
+IHGF K G + A ++ ++ + GC P++ + C+ G AL++ + +S
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T +L++GL ++ A EL+ MK R
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKAR 276
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 107/265 (40%), Gaps = 4/265 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A+++ + +A ++LE L + + N + I + ++ + A+Q
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCV-PNAVTYTTLIDGFCKSGNLSEALQL 232
Query: 134 FEEMDK--YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F+ + + +V NAL+ G + E + + K + ++ TY ++
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM-KARDLRADTFTYTTLMDG 291
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G +S V + EM R+ P+ + L+ K +D +V++ M GI
Sbjct: 292 LCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y + ++ L + + A + +L P Y L+ G K ++ A K +
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYV 411
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGG 336
M + PD + LC+ G
Sbjct: 412 EMLDRRLAPDPATCKLLVEMLCKRG 436
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
PN T+ LI G K G L A + + M C P+ + LCQ G+ + A+ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
R P T+ L+ G + + +A EL M+K F
Sbjct: 61 FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNF 100
>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
Length = 506
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 8/320 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D+ +S+ + L ++ + L+E + +R + + R + I + +D A++
Sbjct: 181 DKDTYSLIIHSLCKSGMVDKAKVLVERMISR-NCVPDARIYDPVIEELSKTGRVDEAVEI 239
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+E D SV N+L+LG + ++ + ++FT + G P+ TYN + +
Sbjct: 240 AKEADAKHC-TSVVTYNSLVLGFLKARRLKRGIKVFTRMART-GPSPDIYTYNILFEGLS 297
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G Y +L M + + P+A F L+ G ++++Y ++Q M G
Sbjct: 298 RHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAI 357
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I ++ L + R++E L +L R + PN+ TY ++ K G L+ A +LF M
Sbjct: 358 TYTILLKWLARNARADECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVM 417
Query: 314 TNGGCE-PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
C P++ + + LC E E A+ + A + P + ++V +
Sbjct: 418 LASDCTPPNAITYRALIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQGR 477
Query: 373 VAEANELIGLMKKRFPKSGD 392
+ EA EL+ +R P +GD
Sbjct: 478 IDEAFELL----ERMPFAGD 493
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 106/256 (41%), Gaps = 1/256 (0%)
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ ++M + G S+ LN L G + N + F E + + + TY+ ++
Sbjct: 96 IELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFFREAKNSFSLRASVSTYSILVA 155
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ + ++ VY IL EM + + + L++ K + +++ M
Sbjct: 156 ALTAAKRNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVP 215
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+Y+ I+ L K R +EA + ++ ++ TY L+ GF K L+ K+F
Sbjct: 216 DARIYDPVIEELSKTGRVDEAVEIAKEADAKHCT-SVVTYNSLVLGFLKARRLKRGIKVF 274
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G PD Y + + L + G + A K+ G +P T SL+ GL
Sbjct: 275 TRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVED 334
Query: 371 SKVAEANELIGLMKKR 386
++ A LI M R
Sbjct: 335 NRYHRAVTLIQEMVSR 350
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ V+ Y+I + +L KR+ + +L M S G++ + DTY +IH K G ++ AK L
Sbjct: 145 ASVSTYSILVAALTAAKRNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVL 204
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + C PD+ + L + G + A+++ + + AK T SLV G
Sbjct: 205 VERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKH-CTSVVTYNSLVLGFLK 263
Query: 370 ISKVAEANELIGLMKKRFPKSGDMWN 395
++ ++ M + P S D++
Sbjct: 264 ARRLKRGIKVFTRMARTGP-SPDIYT 288
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP-NATDFGLLLAGFYKEHKYEDV 236
+ PN TYN V+ + C++G + + M P NA + L+ G + + E
Sbjct: 387 LAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRALIHGLCLKMELERA 446
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
+L M K A V Y + + CK R +EA LL+ M G K
Sbjct: 447 VLLLDAMAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAGDK 494
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 120/266 (45%), Gaps = 8/266 (3%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS-KNYEEVKRIFTEFPKVYGIEP 180
G+ ID A+ F M K SV LLLG I+ K+Y + E GI+P
Sbjct: 51 GKLKSIDEALNFFHTMAKMNPLPSVIDF-TLLLGFIVKMKHYTTAISLVKEMHSSLGIKP 109
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ N VI S C + +S+L M + + P+ F +L+ G + DVG+ +
Sbjct: 110 DTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKG---DVGRAV 166
Query: 241 QMM---EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+++ EK G S V Y + I LCK+ ++ EA L M R PN+ Y ++ G
Sbjct: 167 ELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGL 226
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K+G + A L M+ G +P+ + LC G ++ A + M G +P
Sbjct: 227 CKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDL 286
Query: 358 STMKSLVTGLASISKVAEANELIGLM 383
++ LV L K+ +A +IG M
Sbjct: 287 QSLNILVDVLCKEGKIMQAKSVIGFM 312
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 3/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+ A++ + ++K G R V L+ G C + K E V + + + PN Y
Sbjct: 162 VGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNW--NPNVVVY 219
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ V+ C+ G S + EM K I+PN + L+ G ++++ G +L M K
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 279
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ + NI + LCK + +AK+++ M+ G P++ TY LI + + ++
Sbjct: 280 MGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE 339
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A ++F M + GC PD + + C+ A+ + + G+ P T +L+
Sbjct: 340 ATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIG 399
Query: 366 GLASISKVAEANELIGLMKK 385
G + + A EL M K
Sbjct: 400 GFCQVGRPLAAKELFLNMHK 419
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 7/269 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y N +D A + FE M G + A +L+ G KN + + E KV G P
Sbjct: 331 YCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKV-GFTP 389
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ T+ +I FC+ G + + M + PN ++L G K + +
Sbjct: 390 DVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLF 449
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
MEK + + +Y+I + +C + A L + ++G++ N+ Y +I+GF K+
Sbjct: 450 HAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQ 509
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L+ A+ L ++M GC PDS + +F L E ++K KG+ +T
Sbjct: 510 GLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTT 569
Query: 361 KSLVTGLASISKVAEANELIGLMKKRFPK 389
+ ++ L++ E E + FPK
Sbjct: 570 EMIINYLSTNQGDNELREFL------FPK 592
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 89/209 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+PN TY +I+ C G S+L EM + + P+ +L+ KE K
Sbjct: 246 GIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 305
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
V+ M G V YN I C + +EA + + M+SRG P++ Y LIHG
Sbjct: 306 KSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHG 365
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K N+ A L M G PD + CQ G A ++ G VP+
Sbjct: 366 WCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPN 425
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T ++ GL ++EA L M+K
Sbjct: 426 LQTCAIILDGLCKSQLLSEALSLFHAMEK 454
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 1/252 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM K G+ + +LN L+ + K + F + G P+ TYN +I +C
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIG-FMILVGEVPDVFTYNSLIDRYC 332
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ M + P+ + L+ G+ K +L M K G V
Sbjct: 333 LQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVV 392
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+ I C++ R AK L M G PNL T ++ G K L A LF +M
Sbjct: 393 TWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAM 452
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ + + + +C G+ TAL++ AKG + ++ G A +
Sbjct: 453 EKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLL 512
Query: 374 AEANELIGLMKK 385
+A +L+ M++
Sbjct: 513 DKAEDLLSNMEE 524
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 140/324 (43%), Gaps = 5/324 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +I ++ + + +L E++ L + I Y + + +D A Q E
Sbjct: 71 ITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLE 130
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
E V A+ ++ G ++ +E ++ + + +P+ +N +I FC++
Sbjct: 131 E--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKA 188
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV- 254
G Y +L + PNA + L+ GF K + ++ +++ + NV
Sbjct: 189 GRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVV 248
Query: 255 -YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N I LCK R E A L+ M +R ++ + TY L+ G K+G ++F M
Sbjct: 249 TFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEM 308
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P + + C+ G + A +V R+ +AKG P +T L+ GL KV
Sbjct: 309 LREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKV 368
Query: 374 AEANELI-GLMKKRFPKSGDMWNA 396
A E ++++R P +++A
Sbjct: 369 RTATEFFEKILRERCPPCAVVYSA 392
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 132/312 (42%), Gaps = 15/312 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
+R FS+ ++ L +A + ++ R P+LR + QA +D A
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLL----LASLCQAGTMDQA 57
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M F + SV LN L+ G + ++ +F E K + + P + TY +IK
Sbjct: 58 MAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIK 114
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-VLQMMEKCGIA 249
+C+ +L E + + GF K + ++ + +L M+EK
Sbjct: 115 CYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAK 172
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +N+ I CK R EA +L+ ++S G PN TY LI GF K GNL A +L
Sbjct: 173 PDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQL 232
Query: 310 FASMT--NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
F ++ + EP+ F LC+ E A ++ + A+ T +L+ GL
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGL 292
Query: 368 ASISKVAEANEL 379
+ +E + +
Sbjct: 293 CKQGRTSEVSRV 304
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 13/315 (4%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQA 124
+L PE+ ++ + + + + QLLEE ++ + S+ + +A
Sbjct: 101 ALVPEA----TTYTAIIKCYCKMDRLDQARQLLEE----SSCCSSDVIAITSVARGFCKA 152
Query: 125 NMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+D A Q +M +K + + A N ++ G + E + + G PN+
Sbjct: 153 QRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSM-GCVPNAV 211
Query: 184 TYNKVIKSFCESGDSSSVYSILAEM--RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TY +I FC+SG+ S + + R PN F L++G K + E ++++
Sbjct: 212 TYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVK 271
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M+ + + Y + LCK R+ E + + ML G P++ TY L+H K G
Sbjct: 272 QMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAG 331
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+L+ A+++ SM G PD + + L + G+ TA + + + P
Sbjct: 332 SLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYS 391
Query: 362 SLVTGLASISKVAEA 376
+LV G + V EA
Sbjct: 392 ALVRGCCKAALVDEA 406
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 130/302 (43%), Gaps = 13/302 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLL----EELKTRPDLRQNERFHVHSIVLYG--QANMI 127
D +A + +A + QLL E+ +PD+ +++++G +A +
Sbjct: 138 DVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIV------AWNVIIHGFCKAGRV 191
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP-KVYGIEPNSETYN 186
A + E + G + L+ G S N E ++F + + EPN T+N
Sbjct: 192 REAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFN 251
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++ + ++ +M+ + +R + + L+ G K+ + +V +V + M +
Sbjct: 252 ALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLRE 311
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V Y + + CK ++A+ ++ M+++GI P++ TY L+ G + G + A
Sbjct: 312 GCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTA 371
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ F + C P + + C+ + A+K + + P +T K LV
Sbjct: 372 TEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEM 431
Query: 367 LA 368
L
Sbjct: 432 LC 433
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A+ ++HA + ++M LR L+ G EV R+F E + G P+
Sbjct: 259 KADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLR-EGCNPSV 317
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ- 241
TY ++ + C++G ++ M K I P+ T + +LL G ++ K + +
Sbjct: 318 VTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEK 377
Query: 242 -MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ E+C + VY+ ++ CK +EA ML R + P+ T K L+ K
Sbjct: 378 ILRERCPPCA--VVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435
Query: 301 GNLE 304
G +
Sbjct: 436 GRTD 439
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 107/265 (40%), Gaps = 4/265 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A+++ + +A ++LE L + + N + I + ++ + A+Q
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCV-PNAVTYTTLIDGFCKSGNLSEALQL 232
Query: 134 FEEMDK--YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F+ + + +V NAL+ G + E + + K + ++ TY ++
Sbjct: 233 FKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM-KARDLRADTFTYTTLMDG 291
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G +S V + EM R+ P+ + L+ K +D +V++ M GI
Sbjct: 292 LCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPD 351
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y + ++ L + + A + +L P Y L+ G K ++ A K +
Sbjct: 352 VTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYV 411
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGG 336
M + PD + LC+ G
Sbjct: 412 EMLDRRLAPDPATCKLLVEMLCKRG 436
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 102/276 (36%), Gaps = 69/276 (25%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN T++ +I C++G +M + PN D LLLA + + +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 240 ----------------------LQMMEKC-----------GIASGVNVYNIRIQSLCKLK 266
LQ+++K + Y I+ CK+
Sbjct: 61 FRGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMD 120
Query: 267 RSEEAKALLD------------GMLSRGI----------------------KPNLDTYKH 292
R ++A+ LL+ ++RG KP++ +
Sbjct: 121 RLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR--ASMA 350
+IHGF K G + A ++ ++ + GC P++ + C+ G AL++ + +S
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRD 240
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T +L++GL ++ A EL+ MK R
Sbjct: 241 HHAEPNVVTFNALISGLCKADRLEHAFELVKQMKAR 276
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
PN T+ LI G K G L A + + M C P+ + LCQ G + A+ +
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
R P T+ L+ G + + +A EL M+K F
Sbjct: 61 FRGIQCS---PSVITLNILINGFCELQLLDKALELFHEMEKNF 100
>gi|125553201|gb|EAY98910.1| hypothetical protein OsI_20865 [Oryza sativa Indica Group]
Length = 440
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 138/330 (41%), Gaps = 6/330 (1%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN-MIDH 129
+PL F+ + L A+ +A + +T P + HS++ +N D
Sbjct: 91 APLRPTVFAAVIDHLGAASCPDAAVGVF---RTVPAFCSHSAATFHSLLNALVSNGRTDA 147
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A K G+R + + N +L G L + + + E G+ P T+N ++
Sbjct: 148 ARDMLPLAPKLGVRLNAVSYNIILKGVCLRDGFMGARGVLDEMLS-RGVRPTVVTFNTLV 206
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C G+ + ++ EM R+ + PNA + LL+ G ++ D K++ ME G
Sbjct: 207 GSACREGELGAAERLIDEMARRGVAPNAATYALLMRGLCDADRHADAEKLMFDMEYRGCQ 266
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ V Y + + S + ++ + LL M R +KP+ +Y LI G + A +
Sbjct: 267 ADVVNYGVLMSSRARRGDADGVRELLSAMRKRKLKPDDASYNILIRCLCDAGRADEAHRA 326
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P + + + C+ +++ L+V A MA G P T + L GL
Sbjct: 327 LLEMQLRGTVPGAATYRVLVDGCCRARDFDLGLRVFNAMMASGHCPQARTFRHLARGLGE 386
Query: 370 ISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
K EA ++ M +R D W A +
Sbjct: 387 DGKAEEAFFVLEQMARREMSLDADGWQAVV 416
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 12/308 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMID 128
D F+ + L N + L++++ R PDL + V+ G + ID
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV------TYGTVVNGLCKRGDID 240
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ ++M+K + V N ++ G K+ ++ +FTE GI P+ TY+ +
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN-KGIRPDVFTYSSL 299
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C G S +L++M + I PN F L+ F KE K + K+ M K I
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y+ I C R +EAK + + M+S+ PN+ TY LI GF K +E +
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M+ G ++ + + Q + + A V + ++ G P+ T L+ GL
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 369 SISKVAEA 376
K+A+A
Sbjct: 480 KNGKLAKA 487
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 111/266 (41%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + I A+ ++M + G + L+ G L E + + + G +P
Sbjct: 163 YCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQP 221
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY V+ C+ GD S+L +M + I + + ++ G K +D +
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ GI V Y+ I LC R +A LL M+ R I PN+ T+ LI F KE
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KL+ M +PD + + C + A + ++K P+ T
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G +V E EL M +R
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQR 427
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 113/253 (44%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EMD G+R V ++L+ + + R+ ++ + I PN T++
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFS 332
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F + G + EM ++SI P+ + L+ GF + ++ + ++M
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V Y+ I+ CK KR EE L M RG+ N TY LIHGF + + + A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F M + G P+ + + LC+ G+ A+ V P T ++ G
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 367 LASISKVAEANEL 379
+ KV + EL
Sbjct: 513 MCKAGKVEDGWEL 525
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 139/324 (42%), Gaps = 12/324 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + L + H + L E+ RPD+ + + YG+ + A
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL-ISCLCNYGRWS---DA 312
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +M + + +V +AL+ + E ++++ E K I+P+ TY+ +I
Sbjct: 313 SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLIN 371
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC + M K PN + L+ GF K + E+ ++ + M + G+
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I + + + A+ + M+S G+ PN+ TY L+ G K G L A +F
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKGWVPHFSTMKSLVTGLAS 369
+ EPD Y + + +C+ G+ E ++ C S+ KG P+ ++++G
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL-KGVSPNVIAYNTMISGFCR 550
Query: 370 ISKVAEANELIGLMKKR--FPKSG 391
EA+ L+ MK+ P SG
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSG 574
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F +M K S+ N LL +E V + E + GI + TY+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISL-GEQMQTLGISHDLYTYS 122
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I FC S ++LA+M + P+ LL G+ + D ++ M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + I L ++ EA AL+D M+ RG +P+L TY +++G K G+++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G E D + LC+ + AL + KG P T SL++
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 367 LASISKVAEANELIGLMKKR 386
L + + ++A+ L+ M +R
Sbjct: 303 LCNYGRWSDASRLLSDMIER 322
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 8/253 (3%)
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGL 142
+L +A H + EL D N + I + +A ++ M+ F EM + GL
Sbjct: 377 DRLDEAKH-------MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+ L+ G +++ + + +F + V G+ PN TYN ++ C++G +
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++R ++ P+ + +++ G K K ED ++ + G++ V YN I
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C+ EEA +LL M G PN TY LI ++G+ E + +L M + G D+
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDA 608
Query: 323 YCFFMFTYFLCQG 335
+ T L G
Sbjct: 609 STIGLVTNMLHDG 621
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 128/291 (43%), Gaps = 2/291 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +S +S L ++ S+LL ++ R + N I + + + A +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++EM K + + ++L+ G + +E K +F E PN TY+ +IK FC
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFC 409
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ + EM ++ + N + L+ GF++ ++ V + M G+ +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + LCK + +A + + + ++P++ TY +I G K G +E +LF ++
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+ G P+ + C+ G E A + + G +P+ T +L+
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 2/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A FE M +V + L+ G +K EE +F E + G+ N+ TY
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYT 437
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I F ++ D + + +M + PN + +LL G K K V + +++
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + YNI I+ +CK + E+ L + +G+ PN+ Y +I GF ++G+ E A
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G P+S + + G+ E + ++ + + G+ ST+ LVT
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTN 616
Query: 367 L 367
+
Sbjct: 617 M 617
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 142/287 (49%), Gaps = 10/287 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHA 130
+DR++++ +S + ++E+ + L+ + + +SI++ G NM ++ A
Sbjct: 530 MDRVSYNTLISGCCGNKKLDEAFMFMDEM-VKKGLKPDN--YTYSILIRGLLNMNKVEEA 586
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+Q + + + G+ V + ++ GC ++ EE +++F E ++PN+ YN +I
Sbjct: 587 IQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMS-NNLQPNTVVYNHLIG 645
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++C SG S + +M+ K I PN+ + L+ G + E+ +L+ M G+
Sbjct: 646 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEP 705
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I KL + + + LL M S+ + PN TY +I G+ ++GN+ A +L
Sbjct: 706 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 765
Query: 311 ASMTNGGCEPDSYCFFMFTY-FLCQGG---EYETALKVCRASMAKGW 353
M G PDS + F Y +L QGG ++ + + A++ +GW
Sbjct: 766 HEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDEENYAAIIEGW 812
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F++ + G+ PN TYN VI SG + +M + + P + +
Sbjct: 269 EEAIELFSKMEEA-GVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSI 327
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G K + D VL+ M + G V VYN I SL + +A + D M+S+G
Sbjct: 328 LVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKG 387
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+ TY LI G+ K G + A++L M + G + F LC +++AL
Sbjct: 388 LSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSAL 447
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL-IGLMKKRFPKSGDMWNAAL 398
+ + + P + +L++GL K ++A EL + + K F NA L
Sbjct: 448 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALL 504
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I L +M D A++ EM + L L+ G + + ++ +F G
Sbjct: 434 ICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLN-KG 492
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+++T N ++ CE+G + I E+ + + + L++G K ++
Sbjct: 493 FLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAF 552
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M K G+ Y+I I+ L + + EEA G+ P++ TY +I G
Sbjct: 553 MFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGC 612
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K E +KLF M + +P++ + C+ G AL++ KG P+
Sbjct: 613 CKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNS 672
Query: 358 STMKSLVTGLASISKVAEANELIGLMK 384
+T SL+ G++ IS+V EA L+ M+
Sbjct: 673 ATYTSLIKGMSIISRVEEAKLLLEEMR 699
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 112/264 (42%), Gaps = 4/264 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F + G+ S N LL + + +++ F K G+ P+ + I
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK--GVSPDVYLFTTAI 259
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC+ G + ++M + PN + ++ G +Y++ + M + G+
Sbjct: 260 NAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVE 319
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+I ++ L K KR +A +L M +G PN+ Y +LI + G+L A ++
Sbjct: 320 PTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEI 379
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + G S + C+ G+ + A ++ + ++ G+ + + S++ L S
Sbjct: 380 KDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCS 439
Query: 370 ISKVAEANELIG--LMKKRFPKSG 391
A +G L++ P G
Sbjct: 440 HHMFDSALRFVGEMLLRNMSPGGG 463
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 113/279 (40%), Gaps = 1/279 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G + D A E+M + G+ ++ + L+ G +K + + E + G PN
Sbjct: 298 GMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTE-KGFPPN 356
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
YN +I S E+G + I M K + ++ + L+ G+ K + + ++L+
Sbjct: 357 VIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLK 416
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G + I LC + A + ML R + P LI G K G
Sbjct: 417 EMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 476
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
A +L+ N G D+ + LC+ G+ E ++ + + +G+V +
Sbjct: 477 KHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYN 536
Query: 362 SLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAALPR 400
+L++G K+ EA + M K+ K + + L R
Sbjct: 537 TLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIR 575
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 3/272 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI++ G +A I A +EM + G +V N L+ I + + + I +
Sbjct: 325 YSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEI-KDLM 383
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G+ S TYN +IK +C+SG + +L EM N F ++ H +
Sbjct: 384 VSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMF 443
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ + + M ++ G + I LCK + +A L L++G + T L
Sbjct: 444 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNAL 503
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+HG + G LE ++ + G D + C + + A + KG
Sbjct: 504 LHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGL 563
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T L+ GL +++KV EA + G K+
Sbjct: 564 KPDNYTYSILIRGLLNMNKVEEAIQFWGDCKR 595
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 131/285 (45%), Gaps = 8/285 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMIDH 129
LD++++ ++ L +A A+++LL +L+ +PDL +H + + ++
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTI-IHCLC---KNKLLGD 219
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM G+ +V L+ G + N +E + E K+ I P+ T+N +I
Sbjct: 220 ACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEM-KLKNINPDVYTFNILI 278
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + G S+ EM+ K++ PN + L+ G K H E + + M++ GI
Sbjct: 279 DALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 338
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I + +LCK R E AK +L +G N+ TY +I+G K G L
Sbjct: 339 PNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 398
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ M GC P++ F L + E + A K R +A+G +
Sbjct: 399 KSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V GI PN TY +I FC G+ +S+L EM+ K+I P+ F +L+ KE K +
Sbjct: 229 VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKID 288
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ + + M+ + + Y I LCK E A AL M +GI+PN+ +Y L+
Sbjct: 289 EAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILL 348
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K G LE AK+ F + G + + + LC+ G + + + KG +
Sbjct: 349 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCM 408
Query: 355 PHFSTMKSLVTGL 367
P+ T K+++ L
Sbjct: 409 PNAITFKTIICAL 421
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 71/205 (34%), Gaps = 35/205 (17%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P F +L+ K +Y V + + E GI + +I I C L A ++
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 275 LDGMLSRGIKPN---------------------------------LD--TYKHLIHGFGK 299
+L RG PN LD +Y LI+G K
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + +L + +PD + + LC+ A + + KG P+ T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238
Query: 360 MKSLVTGLASISKVAEANELIGLMK 384
+L+ G + + EA L+ MK
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMK 263
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++N + SL K KR +L GI P+L T LI+ F ++ A +FA++
Sbjct: 63 LFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANI 122
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P++ LC GE + AL +A+G+ + +L+ GL K
Sbjct: 123 LKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC---KA 179
Query: 374 AEANELIGLMKK 385
E + L++K
Sbjct: 180 GETKAVARLLRK 191
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 2/206 (0%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G EPN Y+ VI FC+ G + +M + PN + + +K+++ +
Sbjct: 645 HGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDL 704
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V KVL M + V +Y + LCK+ +++EA L+ M +G PN+ TY +I
Sbjct: 705 VLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMID 764
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GFGK G +E +LF M + GC P+ + + C G + A K+ W
Sbjct: 765 GFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPK 824
Query: 356 HFSTMKSLVTGLAS--ISKVAEANEL 379
H + + ++ G + I+ + +EL
Sbjct: 825 HILSHRKIIEGFSQEFITSIGLLDEL 850
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 23/285 (8%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY---- 176
Y ++ +A + F++M K G + N + +G + S + I K Y
Sbjct: 359 YCKSRDYSYAYKLFKKMIKCGCQPGYLVYN-IFIGSVCSNEEQPSSDILDLVEKAYSEML 417
Query: 177 --GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ N + + C +G + I+ EM K P+ + + ++ K E
Sbjct: 418 DLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVE 477
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ + M++ GI V Y I I S CK ++A+ D ML +G PN+ TY LI
Sbjct: 478 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALI 537
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC--------R 346
H + K + A +LF M GC+P+ + C+ G+ E A ++
Sbjct: 538 HAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIES 597
Query: 347 ASMAKGWV--------PHFSTMKSLVTGLASISKVAEANELIGLM 383
+ M K + P+ T +LV GL ++V EA+EL+ M
Sbjct: 598 SDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTM 642
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 147/386 (38%), Gaps = 58/386 (15%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
F+I+ G P D +S + L A+ L EE+K R + + +
Sbjct: 445 FKIICEMMGKGFVP----DDSTYSKVIGFLCDASKVEKAFSLFEEMK-RNGIVPSVYTYT 499
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I + +A +I A + F+EM G +V AL+ + +K +F E +
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF-EMMLL 558
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR----------------RKSIRPNATD 219
G +PN TY +I C++G I A MR PN
Sbjct: 559 EGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVIT 618
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+G L+ G K ++ ++ ++L M G VY+ I CK+ + ++A+ + M
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678
Query: 280 SRGIKPNLDTYK-----------------------------------HLIHGFGKEGNLE 304
RG PNL TY ++ G K G +
Sbjct: 679 ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD 738
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A KL M GC P+ + + G+ E L++ R +KG P+F T + L+
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI 798
Query: 365 TGLASISKVAEANELIGLMKKRF-PK 389
S + EA +L+ MK+ + PK
Sbjct: 799 NHCCSNGLLDEAYKLLDEMKQTYWPK 824
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 138/365 (37%), Gaps = 52/365 (14%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+DR S L + L++E + D + F+ + +A++ + AM
Sbjct: 244 MDRYTLSCFAYSLCKGGKCREAFDLIDEAE---DFVPDTVFYNRMVSGLCEASLFEEAMD 300
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M +V LL GC+ KRI + G PN E +N +I ++
Sbjct: 301 ILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMI-TEGCYPNREIFNSLIHAY 359
Query: 193 CESGDSSSVYSILAEMRRKSIRP------------------------------------- 215
C+S D S Y + +M + +P
Sbjct: 360 CKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDL 419
Query: 216 -------NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
N ++F L G K++ K++ M G + Y+ I LC +
Sbjct: 420 GVVLNKVNVSNFARCLCG---AGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKV 476
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
E+A +L + M GI P++ TY LI F K G ++ A+K F M + GC P+ +
Sbjct: 477 EKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFP 388
+ + + A ++ + +G P+ T +L+ G ++ +A ++ M+
Sbjct: 537 IHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDI- 595
Query: 389 KSGDM 393
+S DM
Sbjct: 596 ESSDM 600
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G KP+ TY LI F + L+ A + M + D Y F Y LC+GG+ A
Sbjct: 206 GYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREA 265
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ A+ +VP +V+GL S EA +++ M+
Sbjct: 266 FDL--IDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMR 306
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 84/195 (43%), Gaps = 5/195 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G++ I+ ++ F +M G + L+ C + +E ++ E + Y
Sbjct: 766 FGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYW-PK 824
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ ++ K+I+ F + +S +L E+ P + + +L+ + K + E +L
Sbjct: 825 HILSHRKIIEGFSQEFITS--IGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLL 882
Query: 241 QMMEKCGIASGVN--VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ + + N +Y I++L + ++A L M+S+ + P L HLI G
Sbjct: 883 EEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLI 942
Query: 299 KEGNLEGAKKLFASM 313
K + A +L S+
Sbjct: 943 KVDKWQEALQLSDSI 957
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 109/266 (40%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y I A+ ++M + G R L+ G L E + + G +P
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQP 223
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY V+ C+ GD +++L +M I N + ++ K +D +
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME G+ V Y+ I LC +R +A LL M+ R I PN+ T+ LI F KE
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KL+ M +PD + + C + A + ++K P+ T
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G ++ E EL M +R
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQR 429
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 1/252 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ F EM+ G+R +V ++L+ + + + R+ ++ + I PN T+N
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE-RKINPNVVTFNA 335
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I +F + G + EM ++SI P+ + L+ GF + ++ + ++M
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V YN I CK KR +E L M RG+ N TY LIHGF + + + A+
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+F M + G P+ + LC+ G+ E A+ V P T ++ G+
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 368 ASISKVAEANEL 379
KV + +L
Sbjct: 516 CKAGKVEDGWDL 527
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A +M+ + +V + ++ ++ ++ +FTE G+ PN TY+
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN-KGVRPNVITYS 299
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C S +L++M + I PN F L+ F KE K + K+ M K
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I + Y+ I C R +EAK + + M+S+ PN+ TY LI+GF K ++
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M+ G ++ + + Q + + A V + ++ G P+ T +L+ G
Sbjct: 420 VELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 479
Query: 367 LASISKVAEA 376
L K+ +A
Sbjct: 480 LCKNGKLEKA 489
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 122/284 (42%), Gaps = 2/284 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S +S L ++ S+LL ++ R F+ + +++ A + ++
Sbjct: 296 ITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVE-AEKLYD 354
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM K + + ++L+ G + +E K +F E PN TYN +I FC++
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLINGFCKA 413
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ EM ++ + N + L+ GF++ ++ V + M G+ + Y
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + LCK + E+A + + + ++P + TY +I G K G +E LF S++
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G +PD + C+ G E A + R G +P T
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 8/281 (2%)
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
D R+ R +HS+ L D A+ F M K S+ N LL K ++ V
Sbjct: 52 DYREILRNGLHSMKL-------DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV 104
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ + ++ GI N TYN +I FC S ++L +M + P+ LL
Sbjct: 105 ISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G+ + D ++ M + G + I L ++ EA AL+D M+ RG +P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
NL TY +++G K G+++ A L M E + + LC+ + AL +
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KG P+ T SL++ L + + ++A+ L+ M +R
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D + E+M + G+ ++ N +L+ C ++ + G EP+ T +
Sbjct: 102 DLVISLGEKMQRLGISHNLYTYN-ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS 160
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ +C S +++ +M RP+ F L+ G + +K + ++ M + G
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y + + LCK + A LL+ M + I+ N+ Y +I K + + A
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M N G P+ + LC + A ++ + + P+ T +L+
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 368 ASISKVAEANELIGLMKKR 386
K+ EA +L M KR
Sbjct: 341 VKEGKLVEAEKLYDEMIKR 359
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S Y +++++ S + M + P+ +F LL+ K K++ V + +
Sbjct: 50 SGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M++ GI+ + YNI I C+ + A ALL M+ G +P++ T L++G+
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A L M G PD+ F + L + A+ + + +G P+ T
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 362 SLVTGLASISKVAEANELIGLMK 384
+V GL + A L+ M+
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKME 252
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 2/279 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G M++ + + M + G+ S+ N LL G + S E +R+ E + I P
Sbjct: 142 FGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL-EVMENGKIGP 200
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +IK +C+ G + + +M +++ P+ + L+ Y E ++ +
Sbjct: 201 DVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLY 260
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M++ G+ + Y++ I LCK + E A+ + M+ +G K N+ Y LI K
Sbjct: 261 HEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKC 320
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN+ A LF M G EPD + + +C+ G + A++ G +
Sbjct: 321 GNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLY 380
Query: 361 KSLVTGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
SL+ GL +V EA +L ++KK P +NA +
Sbjct: 381 SSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALI 419
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 129/322 (40%), Gaps = 40/322 (12%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
+ +++E K PD+ + I Y Q A + F +M+ + L+
Sbjct: 189 VLEVMENGKIGPDVVT----YNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLI 244
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
C +++ ++ E + G+E Y+ VI C+ G Y++ +M +K
Sbjct: 245 QACYAEGDFDLCLSLYHEMDE-NGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGC 303
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+ N + L+ K + + + M+K G+ V Y + + +CK R +EA
Sbjct: 304 KVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAME 363
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC--------- 324
L+ G+ N Y LI G GK G + A+KLF M GC PDSYC
Sbjct: 364 YLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALA 423
Query: 325 ----------FF-----------MFTYFLCQGGEY-----ETALKVCRASMAKGWVPHFS 358
FF ++TY + G + E ALK+ + KG P +
Sbjct: 424 KCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAA 483
Query: 359 TMKSLVTGLASISKVAEANELI 380
++L GL KVA A +L+
Sbjct: 484 AFRALSIGLCLSGKVARACKLL 505
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 112/268 (41%), Gaps = 4/268 (1%)
Query: 114 HVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +S+V+ G + FE+M + G + +V AL+ N E +F
Sbjct: 273 HAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFER 332
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G+EP+ TY V+ C+SG L R + NA + L+ G K
Sbjct: 333 MKK-EGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAG 391
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + K+ + M K G YN I +L K +++EA A M G + TY
Sbjct: 392 RVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYT 451
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
+I+G +E E A K++ M + G P + F + LC G+ A K+
Sbjct: 452 IMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPM 511
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANEL 379
G +P + + ++ L ++ EA +L
Sbjct: 512 GVIPE-TAFEDMLNVLCKAGRIKEACKL 538
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 24/296 (8%)
Query: 92 NAISQLLE--ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDAL 149
N +S +L+ EL+ RPDL +F + G+ H +Q + S+D L
Sbjct: 62 NFVSFVLKSMELQKRPDLAL--KFFTWA----GKQKKYTHNLQCY--------VSSIDVL 107
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
++ + + VK +F +F + G N N +IKSF G + + M+
Sbjct: 108 -------AINGDLDNVKSVFCKF-RGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMK 159
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ P+ + LL G E +VL++ME I V YN I+ C++ +++
Sbjct: 160 ENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQ 219
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A M R + P+ TY LI EG+ + L+ M G E + + +
Sbjct: 220 KAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVI 279
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC+ G+ V + KG + + +L+ A + EA L MKK
Sbjct: 280 GGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKK 335
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 90/237 (37%), Gaps = 42/237 (17%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+V YG ++ +D AM+ E G+ + ++L+ G + E +++F
Sbjct: 341 DVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVHEAEKLF 400
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E K G P+S YN +I + + G + + M + + +++ G ++
Sbjct: 401 EEMVK-KGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMINGLFR 459
Query: 230 EHKYEDVGKVLQMMEKCGIAS-------------------------------GV---NVY 255
EHK E+ K+ MM GI GV +
Sbjct: 460 EHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPETAF 519
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+ LCK R +EA L DG + RG + LI+ K GN + A KL S
Sbjct: 520 EDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHS 576
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 2/299 (0%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++I V LS A + + + +E+K R ++ + F+ I Y +A + A + F+E
Sbjct: 206 YTILVDGLSTAGDISKVESVFDEIK-RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC 264
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
G+ + AL+ G E + + T+ ++ G+ N +N +I +C G
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDM-QLRGVGHNQIIFNTMIDGYCRHGM 323
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
I A M R I+ + + L G + ++ ED K+L +M + G+ S Y
Sbjct: 324 VDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTT 383
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I K EA+ L M +G +P++ TY +I G+ K G++ A++ M G
Sbjct: 384 LISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
PD Y + + C G+ + AL++ +G P+ +L++GLA + EA
Sbjct: 444 LVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEA 502
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 136/354 (38%), Gaps = 73/354 (20%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
S+V+ G +A +D A + +EM ++G++ + N LL KN V + E +
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEM-E 195
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS---------------------- 212
G+EP TY ++ +GD S V S+ E++RK+
Sbjct: 196 SGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVR 255
Query: 213 -------------IRPNATDFGLLLAGFYKEHKYED------------------------ 235
I PN +G L+ GF K + E
Sbjct: 256 RASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMI 315
Query: 236 --------VGKVLQM---MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
V K L++ ME+ GI V YN LC++ R E+AK LL M G++
Sbjct: 316 DGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVE 375
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
N +Y LI KEG++ A++LF M G P + + + G A +
Sbjct: 376 SNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERF 435
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ KG VP T +LV G KV A L MK+R K + AL
Sbjct: 436 KKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTAL 489
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 12/275 (4%)
Query: 58 ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
+ D C G + P + + ++ + A LL +++ R + N+
Sbjct: 260 VFDECVGNGIEP----NERTYGALINGFCKIGQIEAAEMLLTDMQLR-GVGHNQIIFNTM 314
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR---IFTEFPK 174
I Y + M+D A++ M++ G++ V N L G E+ K+ I TE
Sbjct: 315 IDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE--- 371
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+E N +Y +I + GD + +M K RP+ + +++ G+ K
Sbjct: 372 -NGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIR 430
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ + + MEK G+ V Y + C + + A L + M RG KPN+ Y LI
Sbjct: 431 EAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALI 490
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
G KEG E A + + +M G PD + M
Sbjct: 491 SGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 2/198 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD ++ L + N +LL + T + N + I ++ + + A +
Sbjct: 341 LDVYTYNTLACGLCRVNRMEDAKKLLH-IMTENGVESNYVSYTTLISIHSKEGDMVEARR 399
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F +M+ G R SV N ++ G I S + E +R E K G+ P+ TY ++
Sbjct: 400 LFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEK-KGLVPDVYTYAALVHGH 458
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C +G + EM+++ +PN + L++G KE + E+ + M G+
Sbjct: 459 CVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDD 518
Query: 253 NVYNIRIQSLCKLKRSEE 270
+Y++ + SL KR +E
Sbjct: 519 TLYSMLVGSLHTDKRKDE 536
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 11/321 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD A+SI + + LL++++ + + F Q NM++ A++
Sbjct: 277 LDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVE-ALR 335
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+EM G++ +V L+ G F + + G PN TY +I+
Sbjct: 336 LKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNE-NGPSPNRVTYAVLIEWC 394
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++G+ + Y + +M+ K+I P L+ GF K E+ K+ C IA+ +
Sbjct: 395 CKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIAN-I 453
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN + LCK + EA L ML +G+ P +Y +I G ++GNL+ A +F+
Sbjct: 454 FTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSD 513
Query: 313 MTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G +P+ +Y M YF + G+ E A V + + VP T + GL +
Sbjct: 514 MLDCGLKPNVITYSILMDGYF--KNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKV 571
Query: 371 SKVAEANELIGLMKKRFPKSG 391
+ +EA +++ K+F + G
Sbjct: 572 GRTSEAQDML----KKFVEKG 588
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P +YN +I C G+ S+ ++M ++PN + +L+ G++K E
Sbjct: 483 GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYA 542
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
V M I YNI+I LCK+ R+ EA+ +L + +G P TY ++ G
Sbjct: 543 FYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDG 602
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F KEG++ A + M G P+ + C+ + ALK+ KG
Sbjct: 603 FIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELD 662
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
+ +L+ G + A+ L
Sbjct: 663 IAAYGALIDGFCKKQDIETASWL 685
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TY +I FC++ ++ + EMR K + + +G L+ GF K+ E
Sbjct: 623 GVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETA 682
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + G++ +YN I L E A L ML GI +L TY LI G
Sbjct: 683 SWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDG 742
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG L A L++ M+ G PD + + LC G+ E A K+ P+
Sbjct: 743 LLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPN 802
Query: 357 FSTMKSLVTGLASISKVAEA 376
+L+ G + EA
Sbjct: 803 VPIYNALIAGHFKAGNLQEA 822
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 84/209 (40%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P TYN ++ F + G SS + EM + PN + L+ GF K + +
Sbjct: 588 GFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLA 647
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ M G+ + Y I CK + E A L +L G+ PN Y LI G
Sbjct: 648 LKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISG 707
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ N+E A L M G D + L + G AL + AKG +P
Sbjct: 708 YRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPD 767
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
L+ GL ++ A +++ M++
Sbjct: 768 IIIYTVLINGLCGKGQLENAQKILAEMER 796
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 2/255 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+MI A + +E+M G+ ++ ++ + N EE K+ F E K G++ ++
Sbjct: 223 DMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLE-AKSRGVKLDAAA 281
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ VI++FC++ D +L +MR K P+ F ++ K+ + ++ M
Sbjct: 282 YSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMV 341
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
CG+ V V ++ CK + A D M G PN TY LI K GN+
Sbjct: 342 SCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMA 401
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A L+ M N P + + E A K+ ++A + + T SL+
Sbjct: 402 KAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACD-IANIFTYNSLL 460
Query: 365 TGLASISKVAEANEL 379
+ L K++EA L
Sbjct: 461 SWLCKEGKMSEATTL 475
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 3/223 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N D A++ EM GL + A AL+ G ++ E +F+E G+ P
Sbjct: 638 FCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG-GLSP 696
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
NS YN +I + + + ++ M + I + + L+ G KE + +
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M GI + +Y + I LC + E A+ +L M I PN+ Y LI G K
Sbjct: 757 SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKA 816
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
GNL+ A +L M + G P+ + + +GG +ALK
Sbjct: 817 GNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG--NSALK 857
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 195 SGDSSSVYSILAE-----MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
SGDS + +IL + +R + + LL + K +K D + + I
Sbjct: 147 SGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIV 206
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ N + +L K EA+ + + M+ +G+ + T ++ K+ N E AKK
Sbjct: 207 PWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKF 266
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F + G + D+ + + C+ + E A + + KGWVP T S++
Sbjct: 267 FLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVK 326
Query: 370 ISKVAEA 376
+ EA
Sbjct: 327 QGNMVEA 333
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 82/230 (35%)
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
F K + + + YN ++ S+ ++ + + I P LL
Sbjct: 161 FIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALV 220
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K + +V + M G+ +I +++ K EEAK SRG+K +
Sbjct: 221 KNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAA 280
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
Y +I F K ++E A L M + G P F + G AL++
Sbjct: 281 AYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEM 340
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
++ G + +LV G K+ A E M + P + A L
Sbjct: 341 VSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVL 390
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN ++ +C SG L +MR + PN + L+ K + +
Sbjct: 239 GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEA 298
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ M K G+ + Y +Q CK R E++ L D M+ G+KP++ TY LI G
Sbjct: 299 RKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDG 358
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G ++ A KL ASM + G +PD + C+ + AL + + ++ G P+
Sbjct: 359 CCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 418
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T ++ GL + A A EL
Sbjct: 419 IITYNIILQGLFHTRRTAAAKEL 441
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 8/208 (3%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYS--------ILAEMRRKSIRPNATDFGLLLAGFY 228
G P+ +YN V+ F + G + + + +L M + + P+ + +L G+
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 255
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
+ ++ L+ M G+ V Y+ + LCK RS EA+ + D M RG++P++
Sbjct: 256 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 315
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY+ L+ G KEG + ++KLF M G +PD + C G+ + A K+ +
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEA 376
++ G P T +L+ G +S++ +A
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDA 403
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F+ M K GL + LL G E +++F ++ G++P+ TYN +
Sbjct: 297 EARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRI-GVKPDIITYNTL 355
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C +G +LA M ++P+ +G L+ G+ + + +D + + M G+
Sbjct: 356 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 415
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + YNI +Q L +R+ AK L + G + L TY ++HG K + A +
Sbjct: 416 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 475
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+F ++ + ++ F + L + G + A + A A G VP T + L
Sbjct: 476 MFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLI 535
Query: 369 SISKVAEANEL 379
+ E ++L
Sbjct: 536 EQGSLEELDDL 546
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 13/283 (4%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H ++I++ +A +D + K G R LL G K + I
Sbjct: 93 HTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL---AEMRRKSIRPNATDFGLLLAGFY 228
G P+ +YN ++K C+ S +L A+ R P+ + +L GF+
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 229 KE--------HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
KE + +VL M K G+ YN + C + +EA L M S
Sbjct: 213 KEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 272
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G++PN+ TY L++ K G A+K+F SMT G EPD + C+ G
Sbjct: 273 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIE 332
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ K+ + G P T +L+ G K+ EA +L+ M
Sbjct: 333 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A +D A + M G++ + L+ G ++ +F E G+ PN
Sbjct: 362 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS-SGVSPNII 420
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +++ + +++ + + + + + + ++L G K + ++ ++ Q +
Sbjct: 421 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 480
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ +NI I +L K R +EAK L + G+ P++ TY + ++G+L
Sbjct: 481 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 540
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
E LF SM GC DS L Q G+ A
Sbjct: 541 EELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 147/328 (44%), Gaps = 12/328 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMIDH 129
LD++++ ++ L + A+++LL +L+ +PD+ ++S+ + ++
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI-INSLC---KNKLLGD 215
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM G+ V L+ G + + +E + E K+ I PN T+N +I
Sbjct: 216 ACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEM-KLKNINPNVCTFNILI 274
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + G +LA M + I+P+ + L+ G++ + + V M + G+
Sbjct: 275 DALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT 334
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I LCK K +EA +L + M + + P++ TY LI G K +LE A L
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIAL 394
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G +PD Y + + LC+ G E A ++ + +AKG+ + L+ L
Sbjct: 395 CKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK 454
Query: 370 ISKVAEANELIGLMKKRFPKSGDMWNAA 397
EA +L K + G M +A
Sbjct: 455 AGFFDEALDL----KSKMEDKGCMPDAV 478
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 142/321 (44%), Gaps = 18/321 (5%)
Query: 76 MAFSIAVSKLSQANHFNAIS--QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM-- 131
+AFS+ + L + H NAI+ L++ L R ++++ FH + Q + + +
Sbjct: 110 LAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLI 169
Query: 132 -------------QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+ +++ + ++ V N ++ +K + +++E V GI
Sbjct: 170 NGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM-IVKGI 228
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ TY +I FC G +S+L EM+ K+I PN F +L+ KE K ++
Sbjct: 229 SPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKI 288
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L +M K I V YN I + + AK + M RG+ P++ Y ++I+G
Sbjct: 289 LLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLC 348
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K ++ A LF M + PD + LC+ E A+ +C+ +G P
Sbjct: 349 KTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVY 408
Query: 359 TMKSLVTGLASISKVAEANEL 379
+ L+ GL ++ +A E+
Sbjct: 409 SYTILLDGLCKSGRLEDAKEI 429
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K ++ V N+L+ G L + K +F + G+ P+ + Y +I C++
Sbjct: 293 MMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ-RGVTPDVQCYTNMINGLCKTK 351
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+ EM+ K++ P+ + L+ G K H E + + M++ GI V Y
Sbjct: 352 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYT 411
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + LCK R E+AK + +L++G N+ Y LI+ K G + A L + M +
Sbjct: 412 ILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDK 471
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
GC PD+ F + L + E + A K+ R +A+G +
Sbjct: 472 GCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 7/260 (2%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNK 187
+ F++ + G+ + L ++L+ C + + + F+ F + G PN+ T N
Sbjct: 76 VISLFKQFEPNGITPDLCTL-SILINCFCHQAH--ITLAFSVFANILKRGFHPNAITLNT 132
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+IK C G+ ++ + + + +G L+ G K + + V ++L+ +E
Sbjct: 133 LIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHS 192
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V +YN I SLCK K +A + M+ +GI P++ TY LIHGF G+L+ A
Sbjct: 193 VKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAF 252
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-PHFSTMKSLVTG 366
L M P+ F + L + G+ + A K+ A M K + P T SL+ G
Sbjct: 253 SLLNEMKLKNINPNVCTFNILIDALSKEGKMKEA-KILLAVMMKACIKPDVFTYNSLIDG 311
Query: 367 LASISKVAEANELIGLMKKR 386
+ +V A + M +R
Sbjct: 312 YFLVDEVKHAKYVFYSMAQR 331
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I HA+ + ++ K GL + L+ G + E K IF + P+ Y + P YN
Sbjct: 259 IKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPR-YEVAPTVPVYN 317
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I SG + + E+ RK +RP+ +++ G + + + L++M++
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS 377
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA YN+ I CK +EA M G++PN+ TY LI G K G +E A
Sbjct: 378 GIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIA 437
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M G EP+ + + + G+ + A + + KG + T+ LV G
Sbjct: 438 MAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDG 497
Query: 367 LASISKVAEANELI 380
L ++V +A I
Sbjct: 498 LCRENRVQDAVRFI 511
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 5/223 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEP 180
+A+M+ + F+EM G+ SV N L+ C ++ +V + + + ++ I+P
Sbjct: 150 KAHMLARVWELFDEMLGRGMVPSVVTYNTLINAC---RHQGDVAKAWEVWDQMVARRIDP 206
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I + CE + EM+ +RPN + L++ +K +
Sbjct: 207 NVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFY 266
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ KCG+ ++ I LC+ R EAK + M + P + Y LIHG +
Sbjct: 267 YDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRS 326
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
G + A F + G PD + + LC GG+ + A +
Sbjct: 327 GYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATR 369
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 11/241 (4%)
Query: 104 RPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
R LR +E SIV+ G + A + E M + G+ + A N L+ S N
Sbjct: 341 RKGLRPDE--FTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGN 398
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+E T +V G+EPN TY+ +I ++G+ +I EM K + PN +
Sbjct: 399 LDEALVTCTRMSEV-GVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYT 457
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL---DGM 278
L+ G K + + + ME+ GI S ++ + LC+ R ++A + G
Sbjct: 458 ALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQ 517
Query: 279 LSRGIKPNLD---TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
P++ TY LI+G +G A F+ M + G PD + + + LC
Sbjct: 518 KKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCML 577
Query: 336 G 336
G
Sbjct: 578 G 578
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D SI V L ++ LE ++ + + N + I Y ++ +D A+ T
Sbjct: 347 DEFTCSIVVRGLCDGGQMQVATRFLEVMQ-QSGIALNAAAYNVLIDEYCKSGNLDEALVT 405
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + G+ +V ++L+ G + E I+TE G+EPN TY +I
Sbjct: 406 CTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEM-VAKGVEPNVVTYTALIHGHA 464
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG------ 247
++GD + + + EM K I NA +L+ G +E++ +D + + ME G
Sbjct: 465 KNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI--MEYSGQKKSEK 522
Query: 248 ---IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
IA+ V Y I L + EA M G+ P+ TY +I G G +
Sbjct: 523 NPSIANSVT-YMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 581
Query: 305 GAKKLFASMTNGGCEP 320
A L+A M G +P
Sbjct: 582 NAMMLYADMVKVGVKP 597
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 11/318 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
+ +S+ ++ L + + +L++E+ TR ++ L G + +M A +
Sbjct: 108 VTYSVLINGLCKVGRIDEARELIQEM-TRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 166
Query: 134 FEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ LR S D + + L+ G +E +F + G PN TYN ++
Sbjct: 167 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM-IAGGYVPNVITYNALVNG 225
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++ ++++ M K + P+ + +L+ F K + ++ ++L M G
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285
Query: 252 VNV-----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V V +NI I CK E+A AL + M+++ ++P++ T+ LI G K G +E A
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + M N G P+ + + LC+ G E A + ++ G VP T SLV
Sbjct: 346 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405
Query: 367 LASISKVAEANELIGLMK 384
L S+ +A +L+ +K
Sbjct: 406 LCRASRTDDALQLVSELK 423
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 6/265 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSV-----DALNALLLGCILSKNYEEVKRIFTEFPKV 175
+ +A+ +D A++ M G +V N L+ G + N+E+ +F E
Sbjct: 261 FCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEM-VA 319
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
++P+ T+ +I C++G + IL M + PN + L+ G K + E+
Sbjct: 320 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 379
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ L+ M G Y + +LC+ R+++A L+ + S G P+ TY L+
Sbjct: 380 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 439
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G K G E A + M G +PDS+ F L + G +++ R +AKG +P
Sbjct: 440 GLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLP 499
Query: 356 HFSTMKSLVTGLASISKVAEANELI 380
+T S++ + K+ + +I
Sbjct: 500 DATTCSSILDWVCRSGKLDDVKAMI 524
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 2/213 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ T+N +I C++G+ ++ EM K+++P+ FG L+ G K + E +
Sbjct: 289 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L +M G+ V YN + LCK R EEA L+ M+S G P+ TY L++ +
Sbjct: 349 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ A +L + + + G +PD+ + + L + G+ E A+ V + KG P T
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 468
Query: 360 MKSLVTGLASISKVAEANEL--IGLMKKRFPKS 390
+ +GL +A EL + L K P +
Sbjct: 469 FAACFSGLHRSGNLAGTMELLRVVLAKGMLPDA 501
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 104/245 (42%), Gaps = 46/245 (18%)
Query: 185 YNKVIKSFCESGDSSSVYSIL-AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
YN V++S C +GD++ I EM R + P + ++ G K + D+G +++
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSN---DLGAGMELF 60
Query: 244 EKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
E+ G V YN I SLCK EEA+ L M SRG PN+ TY LI+G K
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 301 GNLEGAKKLFASMTNGGCE---------------------------------------PD 321
G ++ A++L MT C+ PD
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ F LC+ G+ + A V +A G+VP+ T +LV GL K+ A+ +I
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 382 LMKKR 386
M +
Sbjct: 241 SMVDK 245
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 37/266 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D++ F+I ++ +A +F S L
Sbjct: 290 DKVTFNILIAGACKAGNFEQASAL------------------------------------ 313
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEEM L+ V AL+ G + E + I + G+ PN TYN ++ C
Sbjct: 314 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL-DLMGNLGVPPNVVTYNALVHGLC 372
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG L EM P++ +G L+ + + +D +++ ++ G
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + L K ++E+A +L+ M+ +G +P+ T+ G + GNL G +L +
Sbjct: 433 TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVV 492
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYE 339
G PD+ ++C+ G+ +
Sbjct: 493 LAKGMLPDATTCSSILDWVCRSGKLD 518
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 100/212 (47%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F + G PN+ TYN ++ C+ + +++AE R++ P+ + L+A
Sbjct: 68 LFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAAL 127
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
++ + ++ M + G + +N I LC+ +R +A + + M+ R PNL
Sbjct: 128 FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNL 187
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY +I G K L+ A++L M + GC PD + G ++AL + R
Sbjct: 188 VTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRR 247
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+++G +P T ++ L + +V +A+E+
Sbjct: 248 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEI 279
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 134/307 (43%), Gaps = 14/307 (4%)
Query: 84 KLSQA-NHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKY 140
+++QA HF+A LE +PD+ ++ ++ G + +D A F +M
Sbjct: 25 RVAQALEHFDAS---LELAHAQPDVVS------YTTLINGLCKLGRVDAAFDLFRKMVAA 75
Query: 141 G-LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G R + NAL+ G + + + E K P+ TYN ++ + + G
Sbjct: 76 GGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARK-RDFAPDVVTYNTLMAALFQLGRVD 134
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ +M + P F ++ G + + D +V M + Y++ I
Sbjct: 135 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVI 194
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
LCK + +EA+ LLD M+S G +P+L Y L+ GF G L+ A L M + GC
Sbjct: 195 DGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCI 254
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + + LC+ G + A ++ R +A P+ T +L+ G S+V E ++
Sbjct: 255 PDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV 314
Query: 380 IGLMKKR 386
+ M R
Sbjct: 315 MREMACR 321
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 121/310 (39%), Gaps = 5/310 (1%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM 126
LA P D ++++ ++ L + +A L ++ R N + + + +
Sbjct: 39 LAHAQP-DVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 97
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A E K V N L+ +E FT+ + G P ++N
Sbjct: 98 LDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTE-EGYVPTLVSFN 156
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C + + + EM + PN + +++ G K + ++ ++L M
Sbjct: 157 AIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE 216
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y + R + A LL M+S+G P++ TY +I K G ++ A
Sbjct: 217 GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDA 276
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++F + C P+ + C+ + KV R + P+ T +++ G
Sbjct: 277 HEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWG 333
Query: 367 LASISKVAEA 376
L+ + + EA
Sbjct: 334 LSMVDRNEEA 343
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 110/280 (39%), Gaps = 40/280 (14%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++ V L + + +A ++ E + R PD+ ++ L+ Q +D A+ TF
Sbjct: 85 YNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVT---YNTLMAALF-QLGRVDEALATF 140
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+M + G ++ + NA++ G ++ + +F E PN TY+ VI C+
Sbjct: 141 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID-RDFHPNLVTYSVVIDGLCK 199
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
S +L M + RP+ + L+ GF + + +L+ M G V
Sbjct: 200 SDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVT 259
Query: 255 YNIRIQSLCKLKRSEEA-------------------KALLDG-------------MLSRG 282
Y + I LCK+ R ++A AL+ G M
Sbjct: 260 YTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMA 319
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+PN+ TY +I G E A +F M+ G PD+
Sbjct: 320 CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 359
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 17/224 (7%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
++F+ ++ L +A ++ E+ R D N +S+V+ G +++ +D A Q
Sbjct: 153 VSFNAIITGLCRARRLADALEVFNEMIDR-DFHPN--LVTYSVVIDGLCKSDQLDEAQQL 209
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEE----VKRIFTEFPKVYGIEPNSETYNKVI 189
+ M G R + A L+LG + + ++R+ ++ G P+ TY VI
Sbjct: 210 LDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ-----GCIPDVVTYTVVI 264
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G + I E+ PN + L+ G+ + + ++ GKV++ M
Sbjct: 265 DKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACR 321
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
V YN I L + R+EEA + M G P+ TY+ L
Sbjct: 322 PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 1/259 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + A++ + EM GL +V L+ G + ++ + +G+ P
Sbjct: 273 YCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMAS-FGVVP 331
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N YN +I +C++G+ S S+ +E+ + I P+ + +L+ G + E+ +L
Sbjct: 332 NIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M+K G YN I CK E+A + M +GI+PN+ T+ LI G+ K
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G +E A L+ M G PD + + G + A ++ + G P+ T+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 361 KSLVTGLASISKVAEANEL 379
L+ GL ++++A +L
Sbjct: 512 SCLIDGLCKDGRISDAIKL 530
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 11/296 (3%)
Query: 91 FNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
FN +S+L E K P++ F V I+ + + +++ A+ + +MD + ++ A N
Sbjct: 113 FNVLSRL-ESSKFTPNV-----FGV-LIIAFSEMGLVEEALWVYYKMD---VLPAMQACN 162
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
+L G + ++ + +++ + G PN TY +I C GD + + EM
Sbjct: 163 MVLDGLVKKGRFDTMWKVYGDM-VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
K I P + +L+ G E + + + + M G+ + YN + CK+ ++
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L ML G+ PN+ T+ LI G K + A+K M + G P+ + +
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G AL + +P T L+ GL + ++ EA+ L+ MKK+
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKK 397
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 110/272 (40%), Gaps = 36/272 (13%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM + + +V L+ G E + +F + G+ PN TYN ++
Sbjct: 212 AFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM-RNSGMLPNLYTYNTMM 270
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ + EM + PN FG+L+ G K + K L M G+
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 250 SGVNVYN-----------------------------------IRIQSLCKLKRSEEAKAL 274
+ VYN I I+ LC + R EEA L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M +G PN TY LI G+ KEGN+E A ++ + MT G EP+ F C+
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCK 450
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
G+ E A+ + + KG +P +L+ G
Sbjct: 451 AGKMEAAMGLYTEMVIKGLLPDVVAYTALIDG 482
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 100/259 (38%), Gaps = 14/259 (5%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A + A+ E++K+ + V + L+ G EE + E K G P
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK-KGFLP 401
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN +I +C+ G+ + ++M K I PN F L+ G+ K K E +
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G+ V Y I K ++EA L M G+ PN+ T LI G K+
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521
Query: 301 GNLEGAKKLFASMTNGG-------------CEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
G + A KLF + T C P+ + LC G A K
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581
Query: 348 SMAKGWVPHFSTMKSLVTG 366
G P T ++ G
Sbjct: 582 MRCSGLRPDVFTCIVIIQG 600
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 19/287 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +SI + L + LL+E+K + L ++ I Y + ++ A++
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT-LIDGYCKEGNMEKAIEV 425
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M + G+ ++ + L+ G + E ++TE + G+ P+ Y +I
Sbjct: 426 CSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM-VIKGLLPDVVAYTALIDGHF 484
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI---AS 250
+ G++ + + EM+ + PN L+ G K+ + D K+ + K G S
Sbjct: 485 KDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGS 542
Query: 251 GVN------------VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
N +Y IQ LC R +A M G++P++ T +I G
Sbjct: 543 KTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHF 602
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ +L L A + G P+S + + + G ++AL C
Sbjct: 603 RAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFC 649
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 158/392 (40%), Gaps = 23/392 (5%)
Query: 8 RTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASL 67
+ + N ++ A S +L+AG + + R + K E F ++ G
Sbjct: 421 KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE-KAFSVIREMIGQGF 479
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMI 127
P D +S ++ L A+ L EE+K R L + + + + +A +I
Sbjct: 480 IP----DTSTYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLI 534
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + F EM + G +V AL+ + +K +F E G PN TY+
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCLPNIVTYSA 593
Query: 188 VIKSFCESGDSSSVYSILAEM----------------RRKSIRPNATDFGLLLAGFYKEH 231
+I C++G I M S RPN +G LL GF K H
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ E+ K+L M G VY+ I LCK+ + +EA+ + M G L TY
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI + K + A K+ + M C P+ + LC+ G+ + A K+ + K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G P+ T +++ G I K+ EL+ M
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F++ D R +V ALL G S EE +++ + G EPN Y+ +I C
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLC 685
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + EM + L+ ++K + + KVL M + A V
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I LCK+ +++EA L+ M +G +PN+ TY +I GFG G +E +L M
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ G P+ + + C+ G + A + W H + + ++ G
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 119/302 (39%), Gaps = 14/302 (4%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
+ S LEEL D R ++ ++ + +A+ +D A EM LR L
Sbjct: 215 SFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 274
Query: 151 ALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
C + K E + + TE P++ Y K+I CE+ L MR
Sbjct: 275 CFAYSLCKVGKWREALTLVETE-----NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR 329
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
S PN + LL G + + +VL MM G ++N + + C
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN------LEGAKKLFASMTNGGCEPDSY 323
A LL M+ G P Y LI + + L+ A+K ++ M G +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
FT LC G+YE A V R + +G++P ST ++ L + SK+ A L M
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 384 KK 385
K+
Sbjct: 510 KR 511
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 112/292 (38%), Gaps = 36/292 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + EM ++G ++ ++L+ K + ++ ++ + PN Y
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE-NSCAPNVVIYT 748
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++I C+ G + Y ++ M K +PN + ++ GF K E ++L+ M
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 247 GIASGVNVYNIRIQSLCK-------------LKRSE--------------------EAKA 273
G+A Y + I CK +K++ E+
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY--CFFMFTYF 331
LLD + P L Y+ LI K LE A +L + Y +
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC + ETA ++ KG +P + SL+ GL SK++EA L+ +
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 94/269 (34%), Gaps = 42/269 (15%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A++ + AM M +V + LL GC+ K KR+ + G P+
Sbjct: 314 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM-MMEGCYPSP 372
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+ +N ++ ++C SGD S Y K+L+
Sbjct: 373 KIFNSLVHAYCTSGDHSYAY-----------------------------------KLLKK 397
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRS------EEAKALLDGMLSRGIKPNLDTYKHLIHG 296
M KCG G VYNI I S+C K S + A+ ML+ G+ N
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G E A + M G PD+ + +LC + E A + G V
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +V + +A + M++
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 6/181 (3%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK-----SIRPNATDFGLLLAGFYKEH 231
GI P TYN ++K F +G + +M+++ S +P+ + ++ G
Sbjct: 229 GIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAG 288
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ E KV M K G A V YN IQ +CK E+A + DGML +G PN+ TY
Sbjct: 289 QLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYT 348
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G G ++ KL M NGGCEP + + +L + GE E L + M+K
Sbjct: 349 VLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFE-KMSK 407
Query: 352 G 352
G
Sbjct: 408 G 408
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R+F + + + + +N ++ + +S + S++ + ++ P+ + L G
Sbjct: 150 RLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQR-FTPDVVTYNTLADG 208
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG---- 282
+ + VL++M + GIA YNI ++ + + A M RG
Sbjct: 209 WCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDE 268
Query: 283 -IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
KP++ +Y ++HG G G LE A+K+F M GC P + +C+ G E A
Sbjct: 269 SCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDA 328
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ V + KG+VP+ T L+ GL K+ +L+ MK
Sbjct: 329 VTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMK 371
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TYN + +C D+S +L M I P T + ++L GF++ +
Sbjct: 197 PDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDF 256
Query: 240 LQMMEKCG-----IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
M+K G V Y + L + E+A+ + D M G P++ TY LI
Sbjct: 257 FLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALI 316
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K+GN+E A +F M G P+ + + LC G+ + LK+ G
Sbjct: 317 QVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCE 376
Query: 355 PHFSTMKSLV 364
P T L+
Sbjct: 377 PIVQTYNVLI 386
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 25/277 (9%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR--- 104
R+K S +L + + +AP + ++I + +A ++K R
Sbjct: 211 RVKDTSRALDVLRLMVESGIAPT----KTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSK 266
Query: 105 -----PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
PD+ VH + + GQ ++ A + F+EM K G SV NAL+
Sbjct: 267 DESCKPDVVSYTTM-VHGLGVAGQ---LEKARKVFDEMAKEGCAPSVATYNALIQVICKK 322
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
N E+ +F V G PN TY +I+ C +G +L M+ P
Sbjct: 323 GNVEDAVTVFDGM-LVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQT 381
Query: 220 FGLLLAGFYKEHKYE---DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE---AKA 273
+ +L+ ++E + E D+ + + E+C + YNI I ++ KR+E+ A
Sbjct: 382 YNVLIRYLFEEGEMEKGLDLFEKMSKGEEC--LPNQDTYNIIISAMFMRKRAEDMVLAAR 439
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
++D M+ RG P + +++G GN E ++KL
Sbjct: 440 MVDEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRKLL 476
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I P+ +YN +I C+ +L EM S PN+ + +L+ G KE + E+
Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++L M++ G+ V VY+ I C + KAL D ML +GI PN+ Y LI+GF
Sbjct: 66 RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K+G A + +MT G +PD Y + LC+ G AL + KG P
Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185
Query: 358 STMKSLVTGLASISKVAEA 376
T L+ GL + +A
Sbjct: 186 VTYNVLINGLCKEGCIGDA 204
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 5/245 (2%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M + + + + N ++ G K E+ + E EPNS TY ++ C+ G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEG-SSCEPNSFTYCILMDGLCKEG 59
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL--QMMEKCGIASGVNV 254
+L EM+RK + + + L++GF + D GK L +M+EK GI+ V V
Sbjct: 60 RVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCL-DRGKALFDEMLEK-GISPNVVV 117
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y+ I CK EA A+L M RGI+P++ TY +I G K+G A LF MT
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G EP + + + LC+ G A K+ + KG + +L+ GL + K+
Sbjct: 178 EKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLD 237
Query: 375 EANEL 379
EA +L
Sbjct: 238 EAMKL 242
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE R+ E K G+E + Y+ +I FC G ++ EM K I PN +
Sbjct: 62 EEAMRLLGEM-KRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ GF K+ + + VL M + GI V Y I LCK R+ +A L D M +G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
+P+ TY LI+G KEG + A K+F +M G + + LC G+ + A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240
Query: 343 KVCRASMAKG-WV-PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
K+ + + G +V P T +++ GL ++ +A E+ M +R
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER 286
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG-IEPNSETY 185
I A + FE M + G R V + N L++G + +E ++F+ + +EP+ T+
Sbjct: 201 IGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITF 260
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N VI+ C+ G I M + N +L+ + K + ++ + + K
Sbjct: 261 NTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHK 320
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y++ I CK+ AK L M G+ P L Y L+ KE +LE
Sbjct: 321 LGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQ 380
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++LF M CEPD+ F + + G+ +A ++ G P T S +
Sbjct: 381 ARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFIN 440
Query: 366 GLASISKVAEA 376
L+ + ++ EA
Sbjct: 441 RLSKLGQMEEA 451
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 20/317 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
D + F+ + L + + ++ + + R F H ++ Y ++ +ID AM+
Sbjct: 256 DVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF--GNLFTCHILIGEYIKSGIIDKAME 313
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++ + K GL S + ++ G K +F+ K+ G+ P YN ++ S
Sbjct: 314 LWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRM-KISGLSPTLFDYNTLMASL 372
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + EM+ + P+ F +++ G K ++L M++ G+
Sbjct: 373 CKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDA 432
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+ I L KL + EEAK D M++ GI P+ Y LI GFG +E L
Sbjct: 433 YTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQ 492
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + G D FLC E+ +++ +P+FS+ S G SIS
Sbjct: 493 MADMGVILDLEITNSILTFLCNSAEHLHVMEL---------LPNFSSESS---GGTSIS- 539
Query: 373 VAEANELIGLMKKRFPK 389
++L+ ++K PK
Sbjct: 540 ---CDKLLMKIQKFNPK 553
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M+R +I P+ + ++ G KE + E +L ME Y I + LCK R
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
EEA LL M +G++ ++ Y LI GF +G L+ K LF M G P+ +
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G + A V +G P T ++ GL + +A +L LM ++
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 110/250 (44%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ +EM G S N L+ G + V ++ + G PN TYN
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM-FLKGCVPNEVTYN 296
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G S+L M PN +G L+ G K+ + D ++L ME+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G ++Y++ I L K ++EEA +L M +G KPN+ Y L+ G +EG A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K++ M GC P++Y + + G E A++V + G + L+ G
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 367 LASISKVAEA 376
L + +V EA
Sbjct: 477 LCGVGRVKEA 486
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 5/307 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
S + + + F+++ +LL ++ + ER + YG+A++ D A+ F
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVII-ERSFIVVFRAYGKAHLPDKAVDLFHR 137
Query: 137 M-DKYGLRQSVDALNALLLGCILSKNYE---EVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M D++ ++SV + N++L I Y E I PN ++N VIK+
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + M + P+ + L+ G KE + ++ +L M+ G +
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+YN+ I LCK L+D M +G PN TY LIHG +G L+ A L
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + C P+ + L + A+++ + +G+ + L++GL K
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 373 VAEANEL 379
EA L
Sbjct: 378 AEEAMSL 384
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A++ F M + L+ G + +E + E + G P+ YN
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM-QSEGCSPSPVIYN 261
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ GD + V ++ M K PN + L+ G + K + +L+ M
Sbjct: 262 VLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSS 321
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
Y I L K +R+ +A LL M RG N Y LI G KEG E A
Sbjct: 322 KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEA 381
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L+ M GC+P+ + + LC+ G+ A ++ +A G +P+ T SL+ G
Sbjct: 382 MSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG 441
Query: 367 LASISKVAEANELIGLMKK 385
EA ++ M K
Sbjct: 442 FFKTGLCEEAVQVWKEMDK 460
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 9/270 (3%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ M++ G + + L+ G EE ++ + + G +PN Y+ ++
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE-KGCKPNIVVYSVLV 404
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C G + IL M PNA + L+ GF+K E+ +V + M+K G +
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y++ I LC + R +EA + ML+ GIKP+ Y +I G G+++ A KL
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 310 FASM---TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M +PD + + LC + A+ + + + +G P T + +
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 367 LASISKVAEAN-----ELIGLMKKRFPKSG 391
L+ S + EL+ + KR SG
Sbjct: 585 LSEKSNSCDKGRSFLEELVVRLLKRQRVSG 614
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 40/258 (15%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR---------------- 209
+++F PK+ + T + +I+S+ SGD SV +L+ +R
Sbjct: 61 EKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFR 120
Query: 210 ---RKSIRPNATD-FGLLLAGFYKEHKYEDVGKVLQMMEKCG------------IASGVN 253
+ + A D F ++ F + + VL ++ G + S +N
Sbjct: 121 AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMN 180
Query: 254 V--------YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+ +N+ I++LCKL+ + A + GM R P+ TY L+ G KE ++
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A L M + GC P + + LC+ G+ K+ KG VP+ T +L+
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 366 GLASISKVAEANELIGLM 383
GL K+ +A L+ M
Sbjct: 301 GLCLKGKLDKAVSLLERM 318
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 158/392 (40%), Gaps = 23/392 (5%)
Query: 8 RTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASL 67
+ + N ++ A S +L+AG + + R + K E F ++ G
Sbjct: 421 KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYE-KAFSVIREMIGQGF 479
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMI 127
P D +S ++ L A+ L EE+K R L + + + + +A +I
Sbjct: 480 IP----DTSTYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADVYTYTIMVDSFCKAGLI 534
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + F EM + G +V AL+ + +K +F E G PN TY+
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF-ETMLSEGCLPNIVTYSA 593
Query: 188 VIKSFCESGDSSSVYSILAEM----------------RRKSIRPNATDFGLLLAGFYKEH 231
+I C++G I M S RPN +G LL GF K H
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ E+ K+L M G VY+ I LCK+ + +EA+ + M G L TY
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI + K + A K+ + M C P+ + LC+ G+ + A K+ + K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G P+ T +++ G I K+ EL+ M
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 1/234 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F++ D R +V ALL G S EE +++ + G EPN Y+ +I C
Sbjct: 627 FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLC 685
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + EM + L+ ++K + + KVL M + A V
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVV 745
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I LCK+ +++EA L+ M +G +PN+ TY +I GFG G +E +L M
Sbjct: 746 IYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERM 805
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ G P+ + + C+ G + A + W H + + ++ G
Sbjct: 806 GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 119/302 (39%), Gaps = 14/302 (4%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
+ S LEEL D R ++ ++ + +A+ +D A EM LR L
Sbjct: 215 SFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLR 274
Query: 151 ALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
C + K E + + TE P++ Y K+I CE+ L MR
Sbjct: 275 CFAYSLCKVGKWREALTLVETE-----NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR 329
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
S PN + LL G + + +VL MM G ++N + + C
Sbjct: 330 ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHS 389
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN------LEGAKKLFASMTNGGCEPDSY 323
A LL M+ G P Y LI + + L+ A+K ++ M G +
Sbjct: 390 YAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKI 449
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
FT LC G+YE A V R + +G++P ST ++ L + SK+ A L M
Sbjct: 450 NVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
Query: 384 KK 385
K+
Sbjct: 510 KR 511
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 112/292 (38%), Gaps = 36/292 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + EM ++G ++ ++L+ K + ++ ++ + PN Y
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE-NSCAPNVVIYT 748
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++I C+ G + Y ++ M K +PN + ++ GF K E ++L+ M
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 247 GIASGVNVYNIRIQSLCK-------------LKRSE--------------------EAKA 273
G+A Y + I CK +K++ E+
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY--CFFMFTYF 331
LLD + P L Y+ LI K LE A +L + Y +
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC + ETA ++ KG +P + SL+ GL SK++EA L+ +
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 94/269 (34%), Gaps = 42/269 (15%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A++ + AM M +V + LL GC+ K KR+ + G P+
Sbjct: 314 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMM-MMEGCYPSP 372
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+ +N ++ ++C SGD S Y K+L+
Sbjct: 373 KIFNSLVHAYCTSGDHSYAY-----------------------------------KLLKK 397
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRS------EEAKALLDGMLSRGIKPNLDTYKHLIHG 296
M KCG G VYNI I S+C K S + A+ ML+ G+ N
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G E A + M G PD+ + +LC + E A + G V
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +V + +A + M++
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 140/344 (40%), Gaps = 38/344 (11%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
F + + LS+ N + Q LEELK+ + F V I Y + M + A+++F M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVL-ISAYAKMGMAEKAVESFGRM 153
Query: 138 DKYGLRQSVDALNALL--------------------LGCILSKNY--------------- 162
++ R V N +L L C S N
Sbjct: 154 KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 163 -EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+ +++F + GI PN TY +I C+ G + + EM+ P++
Sbjct: 214 TSDAQKMFDDMTG-RGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
LL GF K + + ++L++ EK G G+ Y+ I L + +R +A L ML +
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
IKP++ Y LI G K G +E A KL +SM + G PD+YC+ LC G E
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ P T L+ + V EA E+ ++K
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEK 436
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 1/211 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ +S + +I ++ + G + M+ RP+ + ++L +E + +
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 237 G-KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V M KC + + + I + L K R+ +A+ + D M RGI PN TY LI
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G + G+ + A+KLF M G PDS C+ G A ++ R G+V
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL + +A EL M K+
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 146/372 (39%), Gaps = 57/372 (15%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDL-- 107
S+ ++ D G ++P +R+ ++I +S L Q + +L E++T PD
Sbjct: 215 SDAQKMFDDMTGRGISP----NRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 108 ------------RQNERFHVHSIV--------LYGQANMID---------HAMQTFEEMD 138
R E F + + L G +++ID A + + M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K ++ + L+ G + E+ ++ + P GI P++ YN VIK+ C G
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS-KGISPDTYCYNAVIKALCGRGLL 389
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
S+ EM P+A +L+ + + ++ +EK G + V +N
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNAL 449
Query: 259 IQSLCKLKRSEEAKALLDGM-----------LSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I LCK +EA+ LL M LS + DT + G++ A
Sbjct: 450 IDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDT-------MVESGSILKAY 502
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ A + G PD + + C+ G+ + ALK+ KG P T +L+ GL
Sbjct: 503 RDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Query: 368 ASISKVAEANEL 379
+ + EA +L
Sbjct: 563 HRVGREEEAFKL 574
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 123/327 (37%), Gaps = 47/327 (14%)
Query: 97 LLEELKT-RPDLRQNERFH---VHSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALN 150
LLEE ++ + ++ + E F H+I++ ++ A + F E++K G SV N
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 151 ALLLGCILSKNYEEVKRIFTEFP-----------------------------KVY----- 176
AL+ G S +E + + + K Y
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507
Query: 177 ----GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
G P+ +YN +I FC +GD +L ++ K + P++ + L+ G ++ +
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E+ K+ K VY + C+ ++ A L L + + +T
Sbjct: 568 EEEAFKLFY--AKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE 625
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+ F KEG E A + + E + ++ LCQ G + AL V K
Sbjct: 626 IEQCF-KEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKK 684
Query: 353 WVPHFSTMKSLVTGLASISKVAEANEL 379
+ + L+ GL ++ A E+
Sbjct: 685 ILVTPPSCVKLIHGLCKREQLDAAIEV 711
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ E++ G V N +L + +E + + P +G EP+ +YN V+
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS-FGCEPDVVSYNAVL 234
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K C + V ++ EM R + PN F L++ + +E V +VL M + G
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 294
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y I +CK E A +L+ M S G+KPN+ Y L+ G E ++L
Sbjct: 295 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M + C D F + F CQ G + +++ + +G +P T +++ G
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCK 414
Query: 370 ISKVAEANELIGLM 383
+ EA L+ M
Sbjct: 415 EGLIDEAVMLLKSM 428
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A + + +L+EE+ R N I + + + +
Sbjct: 226 DVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEV 284
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G + ++ G + E I P YG++PN YN ++K C
Sbjct: 285 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS-YGLKPNVVCYNTLLKGLC 343
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +LAEM K + F +L+ F + + V ++L+ M + G V
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVI 403
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M + G KPN +Y ++ G A+ L + M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC + F FLC+ G E A+++ + + G P + +++ GL K
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 523
Query: 374 AEANELIGLMKKR 386
EA EL+ +M +
Sbjct: 524 DEALELLNVMVNK 536
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 156/385 (40%), Gaps = 84/385 (21%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANM 126
P + + F+ +S L + F + ++L ++ PD+R +++ ++ G +
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR------MYATIIDGICKEGH 312
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETY 185
++ A + M YGL+ +V N LL G ++ +EE + + E F K ++ T+
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD--DVTF 370
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ FC++G V +L +M + P+ + ++ GF KE ++ +L+ M
Sbjct: 371 NILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430
Query: 246 CGIASGVNVYNIRIQSLCKLKR-----------------------------------SEE 270
CG Y I ++ LC +R E+
Sbjct: 431 CGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQ 490
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF---- 326
A LL ML G P+L +Y +I G GK G + A +L M N G P++ +
Sbjct: 491 AIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 550
Query: 327 -------------MFTYF------------------LCQGGEYETALKVCRASMAKGWVP 355
MF LC+ GE E A++ ++ G VP
Sbjct: 551 ALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVP 610
Query: 356 HFSTMKSLVTGLASISKVAEANELI 380
+ ST L+ GLAS V EA E++
Sbjct: 611 NESTYTILIRGLASEGFVKEAQEML 635
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NA++ G + E +R+ P + PN+ TY V+++ C G + ++L EM
Sbjct: 94 NAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R+ P + ++L + + +VL+ + G A V N+ + ++C +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA LL + S G +P++ +Y ++ G ++L M C P+ F
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+LC+ G +E +V + G P +++ G+ + A+E++ R P
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL----NRMPS 325
Query: 390 SG 391
G
Sbjct: 326 YG 327
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 128/301 (42%), Gaps = 17/301 (5%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QA 124
+ PLD + F+I V Q + + +LLE++ R PD+ ++ V+ G +
Sbjct: 362 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDV------ITYTTVINGFCKE 415
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ID A+ + M G + + + +L G ++ + + + + ++ + G N T
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ-QGCPLNPIT 474
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I C+ G +L +M P+ + ++ G K K ++ ++L +M
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G++ +Y+ +L + R + + D + I+ + Y +I K G E
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG----EYETALKVC-RASMAKGWVPHFST 359
A + A M + GC P+ + + L G E ++C + ++ K + HF
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGI 654
Query: 360 M 360
+
Sbjct: 655 V 655
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 3/129 (2%)
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN + C+ + E A+ L + + PN TY ++ G + A +
Sbjct: 90 VVAYNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLD 146
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M GC P + + C+GG + +A++V A+G ++ +
Sbjct: 147 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG 206
Query: 372 KVAEANELI 380
V EA L+
Sbjct: 207 SVDEALHLL 215
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++ A + EM + V N L+ G + E+ R+F E ++ I PN ++
Sbjct: 116 LVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEM-RLKNIVPNVCSF 174
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I C+ GD S+LA M ++S++P+ L+ G++ K + M +
Sbjct: 175 NILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQ 234
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ + YNI I L K K +EA L M + + P+ TY LI G GK G +
Sbjct: 235 NGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISY 294
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
L M G + + LC+ G ++TA+++ KG+ P+ T LV
Sbjct: 295 VWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVD 354
Query: 366 GLASISKVAEANEL 379
GL ++ +A E+
Sbjct: 355 GLCKNGRLKDAQEI 368
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ Y+ +I C+ Y + EM K I P+ + L+ GF + ED ++
Sbjct: 99 PDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRL 158
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M I V +NI I LCK + K++L M+ + +KP++ T LI G+
Sbjct: 159 FNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFL 218
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
A+ +F +M G D + + L + + A+ + + K P T
Sbjct: 219 VKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTIT 278
Query: 360 MKSLVTGLASISKVAEANELIGLMK 384
+L+ GL + +++ +LI M+
Sbjct: 279 YSTLIDGLGKLGRISYVWDLIDEMR 303
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 1/205 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K ++ V ++L+ G L K + + IF + G+ + +YN +I ++
Sbjct: 197 MIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQ-NGVTIDLRSYNIMINGLSKAK 255
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ EM+ KS+ P+ + L+ G K + V ++ M G ++ V Y+
Sbjct: 256 MVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYS 315
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ LCK + A + + +G +PN+ TY L+ G K G L+ A+++F +
Sbjct: 316 SLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIK 375
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETA 341
G D + + LC+ ++ A
Sbjct: 376 GYRLDVRLYTVMINGLCREALFDEA 400
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 22/217 (10%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+ + + +I SF + +S+LA++ + +P+ LL G + +V
Sbjct: 5 GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINN---EV 61
Query: 237 GKVLQMMEKCGIASGVNVYNIR----IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
K L + IA G + N+ I LCK S E KA P+ Y
Sbjct: 62 KKALHFHDDV-IAKGFRLDNVSYGTLINGLCK---SGETKA-----------PDQFMYSM 106
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I+ K+ + A L+ M PD + Y C G+ E A+++ K
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
VP+ + L+ GL V ++ +M K+ K
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVK 203
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F +M ++ V N L+ G +E K +F K GI+PN TY ++
Sbjct: 251 AIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK-QGIKPNVVTYCSLM 309
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C + + SIL M ++ + P+ + +L+ GF K K ++ + + M I
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHII 369
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I LCKL + A L+D M RG+ P++ TY ++ K ++ A L
Sbjct: 370 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 429
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ + G P+ Y + + LC+GG E A + + KG+ +T ++ G +
Sbjct: 430 LTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCN 489
Query: 370 ISKVAEANELIGLMK 384
EA L+ MK
Sbjct: 490 KGLFDEALALLSKMK 504
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++PN Y+ +I C+ + + + +EM K I PN + L++GF+ + +D
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M I V +NI + CK + +E K + M+ +GIKPN+ TY L+ G+
Sbjct: 253 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 312
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ AK + +M+ G PD + + C+ + + A+ + + K +P
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ GL + K++ A +L+ M R
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDR 401
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 1/235 (0%)
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F M K G++ +V +L+ G L K + K I + G+ P+ ++YN +I F
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ-RGVNPDIQSYNILIDGF 347
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ ++ EM K I P+ + L+ G K K K++ M G+ +
Sbjct: 348 CKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDI 407
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+ + +LCK + ++A ALL + +GI+PN+ TY LI G K G LE A +F
Sbjct: 408 ITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFED 467
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ G + + + C G ++ AL + +P T + ++ L
Sbjct: 468 LLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSL 522
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
++ G PN+ T+ +IK C G + + + +G L+ G K +
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGET 178
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+L+ ++ + V +Y+ I +CK K +A L M+S+GI PN+ TY L
Sbjct: 179 RAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 238
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I GF G L+ A LF M +PD Y F + C+ G+ + V M +G
Sbjct: 239 ISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 298
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T SL+ G + +V +A ++ M +R
Sbjct: 299 KPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQR 331
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 4/212 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G + + Y +I C+ G++ + +L + ++PN + ++ G K+ D
Sbjct: 157 GFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDA 216
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M GI+ V Y+ I + + ++A L + M+ IKP++ T+ L+ G
Sbjct: 217 FDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDG 276
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F K+G ++ K +FA M G +P+ +YC M Y C E A + +G
Sbjct: 277 FCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY--CLVKEVNKAKSILYTMSQRGVN 334
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P + L+ G I KV EA L M +
Sbjct: 335 PDIQSYNILIDGFCKIKKVDEAMNLFKEMHHK 366
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D AM F+EM + V N+L+ G C L K +K + + G+ P+ TY
Sbjct: 353 VDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDR--GVPPDIITY 410
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ ++ + C++ ++L +++ + IRPN + +L+ G K + ED + + +
Sbjct: 411 SSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV 470
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G VN Y + I C +EA ALL M P+ TY+ +I + +
Sbjct: 471 KGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDK 530
Query: 306 AKKLFASMTNG 316
A+KL +T G
Sbjct: 531 AEKLREMITRG 541
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 123/295 (41%), Gaps = 30/295 (10%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE--------- 171
+ +AN +D A++ F+ + YG + + ++ G ++ EE K F E
Sbjct: 309 FSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTT 368
Query: 172 -----------------FPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
F K+ G PN Y VI ++G +M S
Sbjct: 369 VIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS 428
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
P T + +++ G K D KV + M + G Y I K + +EA+
Sbjct: 429 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF-MFTYF 331
LLD ML++G +P TY ++HGF K + AK++ A M GCEP + F + +Y+
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L + G E A +V A+G P SL+ L S +V EA + M ++
Sbjct: 549 LSK-GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 602
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 3/272 (1%)
Query: 116 HSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++ V+ G A+ ID A + FE++ G +V A A++ G + + E+ + F +
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMS 425
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ P TY VI C++ + +M +K P+ + L+ GF K K
Sbjct: 426 GSSCV-PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ K+L +M G Y + CKL EAK ++ M RG +P L + L
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ + +G E A ++ MT GC PD + L G A V + + KG
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGC 604
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T +++ + I V A E++ LM K
Sbjct: 605 APDALTYGTIIQNFSKIGNVEAAGEILELMAK 636
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 146/365 (40%), Gaps = 39/365 (10%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH- 114
F+IL+ A P D A+ + + L + + +L E ++ L F
Sbjct: 144 FKILEEMLAAGCIP----DAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMT 199
Query: 115 -VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+ ++ +G+ +D A + + EM + G ++ ++L+ + +E I+
Sbjct: 200 LIEALSNHGK---LDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTV- 255
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ + YN ++ +C+ G +L +M P+ + +L+AGF + ++
Sbjct: 256 VAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRL 315
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-------------- 279
+D ++ +++ G Y IQ L +R EEAKA D L
Sbjct: 316 DDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLAD 375
Query: 280 ---------------SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ G PN+ Y +I G K G +E K F M+ C P
Sbjct: 376 SKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTT 435
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + LC+ A KV + KG VP T +L+ G + SK+ EA +L+ +M
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 495
Query: 385 KRFPK 389
+ P+
Sbjct: 496 TKGPE 500
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 138/350 (39%), Gaps = 40/350 (11%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQ 132
D + ++ + S+A+ + +LL+ + T+ + SIV + + +MI+ A +
Sbjct: 467 DTITYTTLIDGFSKASKMDEARKLLDVMLTKG--PEPTAVTYGSIVHGFCKLDMINEAKE 524
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+M + G + +LL + EE ++ TE G P+ Y +I
Sbjct: 525 VIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM-TARGCAPDVILYTSLIDLL 583
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+G + M K P+A +G ++ F K E G++L++M K G+
Sbjct: 584 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 643
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN-------------------------- 286
YN + KL+R ++A + D M++ GIKPN
Sbjct: 644 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 703
Query: 287 ----------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
L +Y LI G GK G + A F M + G P+ + + Y L + G
Sbjct: 704 MLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAG 763
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A K+ + G P +L+TGL S V A ++ M KR
Sbjct: 764 RIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKR 813
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+++V+ G +A M+ A + FE+M + G L+ G + +E +++ +
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL-DVM 494
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
G EP + TY ++ FC+ + ++A+MR + P F LL+ + + +
Sbjct: 495 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 554
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E+ +VL M G A V +Y I L R EA+ + D M+ +G P+ TY +
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I F K GN+E A ++ M G PD + + + + A V +A G
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T L+ GL K A L M ++
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 707
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 104/253 (41%), Gaps = 2/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +EM GL V N +L G ++ ++ +F E P + G EP +YN
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSM-GCEPTIVSYN 59
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI Y M P+ F L+ GF K + + VG +L
Sbjct: 60 TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQ-VGHMLLNQALK 118
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V +Y I CK + +L+ ML+ G P+ Y LI K G ++ A
Sbjct: 119 RFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M GC D F L G+ + A ++ R + +G+ P+ SL+
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238
Query: 367 LASISKVAEANEL 379
L KV EANE+
Sbjct: 239 LCKAGKVDEANEI 251
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 116/281 (41%), Gaps = 19/281 (6%)
Query: 96 QLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
Q+L E+ R PD+ + I L + A F+ M + G A +AL
Sbjct: 559 QVLTEMTARGCAPDVI----LYTSLIDLLFSTGRVPEARHVFDSMIEKGC-----APDAL 609
Query: 153 LLGCILSKNYEEVKRI-----FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
G I+ +N+ ++ + E G+ P+ YN ++ + + + +
Sbjct: 610 TYGTII-QNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQSLCKLK 266
M I+PNA F +L+ G +K+ K + + +M+EK + + Y I I L K
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAG 728
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R EA + M+ RGI P TY LI+ K G + AKKL M G PD +
Sbjct: 729 RVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYS 788
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L +TA V + M +G P+ T K L G
Sbjct: 789 ALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 130/312 (41%), Gaps = 7/312 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
D + +I ++ L +A + +L E+ P + ++ V+ G A++ +D A
Sbjct: 19 DVVNCNIVLNGLCKARKIDKAIELFLEM---PSMGCEPTIVSYNTVISGLASIDKMDEAY 75
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F M G V A L+ G + + + + K + P+ Y VI
Sbjct: 76 KFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF--RPDVFLYTSVIHG 133
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C++GD + + IL EM P+A + +L+ K + ++ ++ + M K G
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ I++L + +EA L M+ RG +P L+ LI K G ++ A +++
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ 253
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
++ + C+ G + LK+ + P T LV G + +
Sbjct: 254 TVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRAN 313
Query: 372 KVAEANELIGLM 383
++ +A EL L+
Sbjct: 314 RLDDALELFKLL 325
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 12/245 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVL-YGQANMIDH 129
D + + + S+ + A ++LE + PD F +S++ Y + +D
Sbjct: 607 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC-----FAYNSLMDGYVKLERVDQ 661
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A ++ M G++ + N L+ G + +F E + + P +Y +I
Sbjct: 662 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILI 721
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
++G S +S EM + I P + L+ K + + K+++ M K G+
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF---GKEGNLEGA 306
V Y+ I L + A + M+ RG PN TYK L GF G+ +LE
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 841
Query: 307 KKLFA 311
K+ F+
Sbjct: 842 KQHFS 846
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 133/262 (50%), Gaps = 7/262 (2%)
Query: 95 SQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNAL 152
+Q+ + T+ D+ E +++I++ G A + I A+++++++ + G+ ++ N+L
Sbjct: 491 AQMYFDSVTKSDVA--EEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSL 548
Query: 153 LLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
+ G C K E VK + T KV+G+ P S TY ++ +CE GD S++ +L EM K
Sbjct: 549 IYGFCKKGKLAEAVKLLDT--IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK 606
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+I+P + +++ G KE + + ++L+ M G+ YN IQS CK ++A
Sbjct: 607 AIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKA 666
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L + ML ++P+ TY LI+G GNL+ A +L ++ + +
Sbjct: 667 FQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA 726
Query: 332 LCQGGEYETALKVCRASMAKGW 353
C G+ + AL + +G+
Sbjct: 727 HCAKGDVQNALVFFHQMVERGF 748
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 10/268 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A M+ A+ +M L+ S+ N+LL ++ + + ++ E K G+
Sbjct: 178 YSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEI-KASGVPQ 233
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T +I C + L E + P+ F L++GF K +
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
MM K G+ V YNI + LC EEA + M + G++P++ TY L +GF
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + GA K+ M G PD + + CQ G E + K+ +++G T
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413
Query: 361 KSLVTGLASISKVAEA------NELIGL 382
L++ L ++ EA E+IGL
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGL 441
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 28/285 (9%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A F M KYGL V + N LL G ++ + EE FT + +G+EP+ TYN
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE-FTNDMENHGVEPDIVTYN 344
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ F G S + ++ M + P+ + +L+ G + E+ K+ + M
Sbjct: 345 ILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQ 404
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH-------------- 292
G+ + Y + + SLCK R +EA LL M G+KP+L TY
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMC 464
Query: 293 -------------LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+I G ++G + A+ F S+T + + + + G
Sbjct: 465 SKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIG 524
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
A++ + + KG P T SL+ G K+AEA +L+ +K
Sbjct: 525 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 569
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 13/283 (4%)
Query: 110 NERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
N ++I++ G M I+ + + E+M GL+ S+ LL S +E
Sbjct: 372 NPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVI 431
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E +V G++P+ TY++ G + EM K I PN+ +++G
Sbjct: 432 LLHEM-EVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 482
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+++ + + K +A + +YNI I KL EA ++ +GI P +
Sbjct: 483 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 542
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ LI+GF K+G L A KL ++ G P S + C+ G+ + +
Sbjct: 543 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 602
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
AK P T +V GL ++ E+ +L+ M R FP
Sbjct: 603 MEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 645
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN VI+SFC++ D + + +M + S++P+ + +L+ G +D
Sbjct: 642 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 701
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L ++ I Y I++ C + A M+ RG + ++ Y +I+
Sbjct: 702 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 761
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPD-SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K + AK F M G PD C M F + G+ + ++ + G +P
Sbjct: 762 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAF-HRSGDPNSVFEIFAMMIKCGLLP 820
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 140/343 (40%), Gaps = 36/343 (10%)
Query: 53 SNPFRILDICCGASLAPESPL------DRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
+N FRIL + GA + L D + ++I + Q + +L E++
Sbjct: 347 ANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM----- 401
Query: 107 LRQNERFHVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
L Q + SIV Y ++ ID A+ EM+ GL+ + + G +
Sbjct: 402 LSQGLKL---SIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR---GAV-- 453
Query: 160 KNYEEVKRIFTEF--PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
EE ++ E ++Y PNS + +I E G S + + +
Sbjct: 454 ---EEAIELYEEMCSKRIY---PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 507
Query: 218 TDFGLLLAGFYKEHKY-EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ +++ G+ K E V Q++EK GI+ + +N I CK + EA LLD
Sbjct: 508 ILYNIMIDGYAKLGNIGEAVRSYKQIIEK-GISPTIVTFNSLIYGFCKKGKLAEAVKLLD 566
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+ G+ P TY L++G+ +EG++ + M +P + + LC+ G
Sbjct: 567 TIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEG 626
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
++++ + A+G P T +++ + +A +L
Sbjct: 627 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQL 669
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 86/213 (40%), Gaps = 10/213 (4%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ ++N ++ FC+ G S M + + P+ + +LL G E+ +
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
ME G+ + YNI L A ++ ML G+ P+L TY LI G +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
GN+E + KL M + G + + + LC+ G + A+ + G P T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447
Query: 360 MKSLVTGLASISKVAEANELIGLM--KKRFPKS 390
S V EA EL M K+ +P S
Sbjct: 448 Y--------SRGAVEEAIELYEEMCSKRIYPNS 472
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 3/180 (1%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+LA+M+ +++ + + LL Y + + V ++ G+ I I LC
Sbjct: 190 VLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLC 246
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+ R ++A L P++ ++ L+ GF K G+++ AK F M G PD Y
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + + LC G E AL+ G P T L G + ++ A +++ M
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRM 366
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 3/255 (1%)
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ EEM ++ +V +A++ G + + ++TE + GI P+ TYN +I
Sbjct: 236 LRKMEEMSH--IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE-KGIFPDLFTYNCMID 292
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC SG S +L EM + I PN + L+ + KE K+ + ++ M GI
Sbjct: 293 GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIP 352
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN I CK R + A+ + M ++G P++ T+ LI G+ ++ +L
Sbjct: 353 NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELL 412
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
MT G D+ + + C G+ AL + + ++ G P T +L+ GL
Sbjct: 413 HEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 472
Query: 371 SKVAEANELIGLMKK 385
K+ +A E+ M+K
Sbjct: 473 GKLKDALEMFKAMQK 487
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 145/389 (37%), Gaps = 80/389 (20%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL---------RQNERFHVHS--- 117
E +D + + L FN + ++ ++ RPDL R+ V+S
Sbjct: 59 EDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRME-RPDLVISLYQKMERKQIPCDVYSFNI 117
Query: 118 -IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF--PK 174
I + + + A+ TF ++ K G + V + LL G + E +F + P
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPN 177
Query: 175 VY----------------------------GIEPNSETYNKVIKSFCESGDSSSVYSILA 206
V G++PN TY ++ C+ GD+ S ++L
Sbjct: 178 VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLR 237
Query: 207 EMRRKS-IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
+M S I+PN + ++ G +K+ ++ D + M++ GI + YN I C
Sbjct: 238 KMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSS 297
Query: 266 KRSEEAKALL-----------------------------------DGMLSRGIKPNLDTY 290
R EA+ LL D ML RGI PN TY
Sbjct: 298 GRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITY 357
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+I GF K+ L+ A+ +F M GC PD + F C + ++
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTE 417
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANEL 379
G V +T +L+ G + + A +L
Sbjct: 418 TGLVADTTTYNTLIHGFCLVGDLNAALDL 446
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 14/270 (5%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNK 187
A + +EM + + +V +AL+ + + + E + ++ E P+ GI PN+ TYN
Sbjct: 302 EAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR--GIIPNTITYNS 359
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC+ + + M K P+ F L+ G+ + +D ++L M + G
Sbjct: 360 MIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETG 419
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + YN I C + A L M+S G+ P++ T L+ G G L+ A
Sbjct: 420 LVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 479
Query: 308 KLFASMTNG-----------GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++F +M G EPD + + L G++ A ++ + +G VP+
Sbjct: 480 EMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPN 539
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T S++ GL S++ EA ++ M +
Sbjct: 540 TITYSSMINGLCKQSRLDEATQMFDSMGSK 569
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 12/270 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N +D A F M G V N L+ G +K ++ + E + G+
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTET-GLVA 422
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I FC GD ++ + +M + P+ LL G K +D ++
Sbjct: 423 DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 482
Query: 241 QMMEKC-----------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ M+K G+ V YNI I L + EA+ L M RGI PN T
Sbjct: 483 KAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTIT 542
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y +I+G K+ L+ A ++F SM + PD F C+ G + L++
Sbjct: 543 YSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMG 602
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+G V T +L+ G + + A ++
Sbjct: 603 RRGIVADAITYITLIHGFRKVGNINGALDI 632
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 132/316 (41%), Gaps = 21/316 (6%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDHAM 131
+ ++ + + N +A + + T+ PD+ F ++++ Y A ID
Sbjct: 355 ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDV-----FTFNTLIDGYCGAKRIDDGT 409
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM + GL N L+ G L + + + G+ P+ T N ++
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMIS-SGVCPDIVTCNTLLDG 468
Query: 192 FCESGDSSSVYSILAEMRR-----------KSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
C++G + M++ + P+ + +L++G E K+ + ++
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELY 528
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M GI Y+ I LCK R +EA + D M S+ P++ T+ L+ G+ K
Sbjct: 529 KEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA 588
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G ++ +LF M G D+ + + + G AL + + ++ G P T+
Sbjct: 589 GRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITI 648
Query: 361 KSLVTGLASISKVAEA 376
+S++T L S ++ A
Sbjct: 649 RSMLTVLWSKEELKRA 664
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 16/264 (6%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMID 128
SP D F+ + A + ++LL E+ + ++ +H L G N
Sbjct: 386 SP-DVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLN--- 441
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK----------VYGI 178
A+ ++M G+ + N LL G + ++ +F K G+
Sbjct: 442 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
EP+ +TYN +I G + EM + I PN + ++ G K+ + ++ +
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M + V +N + CK R ++ L M RGI + TY LIHGF
Sbjct: 562 MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFR 621
Query: 299 KEGNLEGAKKLFASMTNGGCEPDS 322
K GN+ GA +F M + G PD+
Sbjct: 622 KVGNINGALDIFQEMISSGVYPDT 645
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 10/262 (3%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV--YGIEPNSETY 185
D + +++M++ + V + N +L+ C S + ++ + F K+ G +P+ T+
Sbjct: 94 DLVISLYQKMERKQIPCDVYSFN-ILIKCFCSCS--KLPFALSTFGKITKLGFQPDVVTF 150
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ ++ C S + +M RPN F L+ G +E + + +L M +
Sbjct: 151 STLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVE 206
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIHGFGKEGNLE 304
G+ Y + +CK+ + A LL M IKPN+ Y +I G K+G
Sbjct: 207 DGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHS 266
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A L+ M G PD + + C G + A ++ + + + P+ T +L+
Sbjct: 267 DAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALI 326
Query: 365 TGLASISKVAEANELIGLMKKR 386
K EA EL M R
Sbjct: 327 NAYVKERKFFEAEELYDEMLPR 348
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 4/183 (2%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I V +NI I+
Sbjct: 63 DLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCF 122
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G +P++ T+ L+HG E + A LF M C P+
Sbjct: 123 CSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNV 178
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + + G P+ T ++V G+ I A L+
Sbjct: 179 VTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRK 238
Query: 383 MKK 385
M++
Sbjct: 239 MEE 241
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRP--DLRQNERFHVHSIVLYGQANMIDHAMQTF 134
+ I + L + + N L ++ R +++ +RF I YG+A + +++ F
Sbjct: 119 TYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFKESVKLF 178
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E M G+ V N++LL + K ++ E K YG++P++ TYN +I+ FC+
Sbjct: 179 ENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCK 238
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ-MMEKC-GIASGV 252
+ + EM P+ + L+ G + K + ++ M +KC ++ V
Sbjct: 239 NSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDV 298
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y I+ C+ + +EA +L+ M RG+KPN+ TY LI G + + K++
Sbjct: 299 VTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQ 358
Query: 313 MT-NGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
M +GG PD+ F C G + A KV
Sbjct: 359 MKGDGGSIPDACTFNTLINSHCCAGNLDEAFKV 391
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 145/325 (44%), Gaps = 17/325 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
D + ++ V L +A L+ + + DL + + I Y + +D A+
Sbjct: 260 DVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALD 319
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EEM+ GL+ ++ N L+ G ++ ++++K I + G P++ T+N +I S
Sbjct: 320 ILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSH 379
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASG 251
C +G+ + + M++ + ++ + +L+ ++ Y + ++ EK + S
Sbjct: 380 CCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSS 439
Query: 252 VN------VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
Y Q LC+ ++++A+ +L ++ RG + L +Y+ +I G KEG+ E
Sbjct: 440 YGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPL-SYQIVILGHCKEGSYEN 498
Query: 306 AKKLFASMTNGGCEPDSYCF-FMFTYFLCQGGEY---ETALKVCRASMAKGWVPHFSTMK 361
L M PD + ++ FL + ET K+ ++S + P ST
Sbjct: 499 GYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSS----YKPQTSTWH 554
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
S++ L V E+ +I +M +R
Sbjct: 555 SILNRLLEQGCVHESAGVIVMMLER 579
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 171/435 (39%), Gaps = 78/435 (17%)
Query: 20 NLATSSLLSAGDEAAALTIKEKKRATIARLKSESN---PFRILDICCGASLAPESPLDRM 76
NL + LL+ A + K+ + RL+ ES ++L +PL
Sbjct: 25 NLNVNHLLTESPNHAEI----KELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPL--- 77
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F + + KL+ +++ LL+++K + +E + I +Y Q + + A++ F
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQ-GFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+ ++G SV N +L +L +N ++ + K G EPN TYN ++K+ C++
Sbjct: 137 IKEFGCDPSVKIYNHVL-DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNN 195
Query: 197 DSSSVYSILAEMRRKSIRPNATDF----------GL--------------------LLAG 226
+L EM K P+A + GL L+ G
Sbjct: 196 KVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALING 255
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
KEH Y+ ++++ M + GI+ V Y+ I LC + E A + L ML RG PN
Sbjct: 256 LCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPN 315
Query: 287 --------------------LDTYKHLIHGFG----------------KEGNLEGAKKLF 310
LD + +I GFG GN+ A +F
Sbjct: 316 IYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVF 375
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M GC P+ + + G + A+ + + G P+ ++V L
Sbjct: 376 SHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 371 SKVAEANELIGLMKK 385
SK EA LI +M K
Sbjct: 436 SKFKEAESLIEIMSK 450
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A +M K G ++ L++L+ GC L + ++ + + +G++PN YN
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++ FC G+ S+ + M PN +G L+ GF K + + M
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V VY +++LC+ + +EA++L++ M P++ T+ I G G L+ A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 307 KKLFASMTNGG-CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
+K+F M C P+ + L + E A + R +G ST +L+
Sbjct: 477 EKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLH 536
Query: 366 GLASISKVAEANELIGLM 383
G + A +L+G M
Sbjct: 537 GSCNAGLPGIALQLVGKM 554
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 4/256 (1%)
Query: 146 VDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL 205
V NAL+ G +Y+ + E + GI PN +Y+ +I C SG +S L
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVE-KGISPNVISYSTLINVLCNSGQIELAFSFL 304
Query: 206 AEMRRKSIRPNATDFGLLLAG-FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+M ++ PN L+ G F + ++ + QM+ G+ V YN +Q C
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCS 364
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+A ++ M G PN+ TY LI+GF K G+L+GA ++ M GC P+
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVV 424
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ LC+ +++ A + + P T + + GL ++ A ++ M+
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 385 K--RFPKSGDMWNAAL 398
+ R P + +N L
Sbjct: 485 QQHRCPPNIVTYNELL 500
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 5/203 (2%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T+ +I+ G SV +L +M+ + + F +++ + + E ++ +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
++ G V +YN + +L R + + M G +PN+ TY L+ K +
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+GAKKL M+N GC PD+ + +C+ G + +A+ + P S +L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-----RELAERFEPVVSVYNAL 252
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ GL A EL+ M ++
Sbjct: 253 INGLCKEHDYKGAFELMREMVEK 275
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 124 ANMIDHAMQTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
A +D A + F +M++ + ++ N LL G + EE + E + G+E +S
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI-FMRGVEWSS 528
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++ C +G ++ +M P+ +++ + K+ K E ++L +
Sbjct: 529 STYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDL 588
Query: 243 MEKCG---IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ CG V Y I LC+ E+ LL+ M+S GI P++ T+ LI+ F
Sbjct: 589 V-SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 2/313 (0%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + + V +LL+E+ + L N + I L + A
Sbjct: 283 SPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAK-GLESNATVYTSVIALLCNKGQVSDA 341
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ E+M +G+ ++ G + +R+F E K G+ + T+ +I
Sbjct: 342 LRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQK-RGLAADRVTHTALIN 400
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C +G+ +L EM K + + + +L+ G+ K + +V M +A
Sbjct: 401 GLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAP 460
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y LCK A LL M ++G++ N+ TY LI+G K GNLE A ++
Sbjct: 461 NVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIM 520
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M G D Y + LC+ GE++ A + + + KG P +T L+ G
Sbjct: 521 TEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMS 580
Query: 371 SKVAEANELIGLM 383
+V +L+ M
Sbjct: 581 GRVEGGKKLLEWM 593
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 125/304 (41%), Gaps = 2/304 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD + F+ +S A +L EE++ R L + H I +A + A +
Sbjct: 355 LDAVVFTTVISGFCSKGDLAAARRLFEEMQKR-GLAADRVTHTALINGLCRAGELKEADR 413
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+EM GL V L+ G N E R+ E + PN TY +
Sbjct: 414 VLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVG-RRVAPNVVTYTALSDGL 472
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ GD + +L EM K + N + L+ G K E +++ ME G + V
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDV 532
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y I +LCK + A +L ML +GIKP++ TY L++GF G +EG KKL
Sbjct: 533 YTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEW 592
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M P+ + C ++ ++ + ++ P+ +T L+ G
Sbjct: 593 MLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARN 652
Query: 373 VAEA 376
+ EA
Sbjct: 653 MKEA 656
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 5/221 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ AM+ EM+ G R V L+ S ++ + E GI+P+ TYN
Sbjct: 513 LEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLD-KGIKPSIATYN 571
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC SG +L M K++RPN + L+ + + + ++ + M
Sbjct: 572 VLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ 631
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+A N YNI I+ CK + +EA M+ +G++ +Y LI K+ A
Sbjct: 632 EVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691
Query: 307 KKLFASMTNGG--CEPDSYCFFMFTYFLCQGGEYETALKVC 345
+ F M N G EPD Y F+M F E+ + +C
Sbjct: 692 RVFFDKMRNEGLTAEPDVYSFYMDISF--NEDNLESTITLC 730
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A Q E M G + N L+ G L E+ ++F GI+ N +YN
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLAD-RGIKLNVFSYN 1264
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ + EMR K ++P+ + L+ + + K+ M+ C
Sbjct: 1265 ILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 1324
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G ++ Y + + LCK EEA L + KPN++ + L+ G + G LE A
Sbjct: 1325 GQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 1384
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K F ++ G EPD+ + + LC G A+K+ KG +P T ++
Sbjct: 1385 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 1444
Query: 367 LASISKVAEANELIGLMKKR 386
L +++ EA +L+ M+ R
Sbjct: 1445 LLKENEIHEAIQLLEEMRNR 1464
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 12/303 (3%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMI 127
SP D F+I + L + Q+LE ++ + PD+ ++ + L GQ +
Sbjct: 1187 SP-DAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTL-MNGLCLVGQ---L 1241
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF-PKVYGIEPNSETYN 186
+ A + FE + G++ +V + N L+ G + +E R F E PK G++P++ TYN
Sbjct: 1242 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPK--GLKPSTVTYN 1299
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + C+SG + + EM+ + + +LL G K E+ + Q ++K
Sbjct: 1300 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKT 1359
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ V++I + +C+ + EEA D + G++P+ Y LI+G +G L A
Sbjct: 1360 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 1419
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KL M GC PDS F + L + E A+++ + + P + S++
Sbjct: 1420 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD-EAVTSMLLC 1478
Query: 367 LAS 369
LAS
Sbjct: 1479 LAS 1481
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 115/260 (44%), Gaps = 1/260 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M A+ F EM G+ V ++L+ G +E F E + GI + TY
Sbjct: 1100 MTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM-EGRGISADVYTY 1158
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I +G V L M + P+A F +L+ G KE K + ++L++M
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRH 1218
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + YN + LC + + E+A L + + RGIK N+ +Y LI+G+ K+ ++
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 1278
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A + F M G +P + + LCQ G TA K+ G ST L+
Sbjct: 1279 AFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 1338
Query: 366 GLASISKVAEANELIGLMKK 385
GL + EA +L +KK
Sbjct: 1339 GLCKNGHLEEAMDLFQSIKK 1358
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 6/254 (2%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYG-IEPNS 182
N I A+Q F+EM K GL L+ G C K +K K+ G + +
Sbjct: 1030 NGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKL----HEKMKGNCKGDV 1085
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY +I + C+ G ++ + +EM I P+ + L+ G + + ++ + +
Sbjct: 1086 FTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKE 1145
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
ME GI++ V YN I L + +E L+ M+ RG P+ T+ LI G KEG
Sbjct: 1146 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 1205
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A+++ M + G EPD + LC G+ E A K+ + +G + +
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265
Query: 363 LVTGLASISKVAEA 376
L+ G K+ EA
Sbjct: 1266 LINGYCKDQKIDEA 1279
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 2/248 (0%)
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K G + L+ G + + ++F E K G+ +++TY +I C++ +
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTK-KGLLGDAKTYGILINGLCKARKT 1067
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
L E + + + + +G+++ K+ + + M GI V VY+
Sbjct: 1068 GLAIK-LHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 1126
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ LC+ R +EA M RGI ++ TY LIHG + G + M + G
Sbjct: 1127 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 1186
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
PD++ F + LC+ G+ A ++ KG P T +L+ GL + ++ +A +
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATK 1246
Query: 379 LIGLMKKR 386
L + R
Sbjct: 1247 LFESLADR 1254
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 121/322 (37%), Gaps = 37/322 (11%)
Query: 99 EELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL 158
E++ T+ L ER+ V +G + D A++ F+ D N LL
Sbjct: 901 EKIGTKASLSPFERY-VRDQCRFGIIKLND-AIKLFDRSLCSEPMPCTDTFNHLLASVAK 958
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
Y V ++ + V GI+P+ T N +I C + + ++ P+A
Sbjct: 959 LGYYSTVFPMYRKINDV-GIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAV 1017
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR----------- 267
L+ G + E+ D ++ M K G+ Y I I LCK ++
Sbjct: 1018 TVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM 1077
Query: 268 -----------------------SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ EA + M+ GI P++ Y L+ G + G L+
Sbjct: 1078 KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLK 1137
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + F M G D Y + + L + G ++ + +G+ P T L+
Sbjct: 1138 EALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILI 1197
Query: 365 TGLASISKVAEANELIGLMKKR 386
GL KV EA +++ LM+ +
Sbjct: 1198 DGLCKEGKVGEAQQILELMRHK 1219
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 39/311 (12%)
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
+ +V Y +A + +A++ M K G+ S+ N + + E+ + F E +V
Sbjct: 240 YVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALK-FLERMQV 298
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI+P+ TYN +IK +C+ ++A + K P+ + ++ KE K E+
Sbjct: 299 TGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEE 358
Query: 236 V--------------------GKVLQMMEKCGIAS------------GVNV----YNIRI 259
V ++ M+ K G A G ++ Y+ +
Sbjct: 359 VKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIV 418
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
S C+ R +EAK+L+ M SRG P++ TY ++ GF + G ++ AKK+ M GC+
Sbjct: 419 HSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCK 478
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
P++ + LC G+ A ++ S W P+ T +++ GL K++EA +L
Sbjct: 479 PNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDL 538
Query: 380 IGLMKKR--FP 388
M ++ FP
Sbjct: 539 TREMVEKGFFP 549
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 148/322 (45%), Gaps = 16/322 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV----HSIVLYG--QANMI 127
D++ ++ + LS+ H + L+E Q++ FH+ +S +++ Q +
Sbjct: 375 DQVTYNTLIHMLSKHGHADDALAFLKE-------AQDKGFHIDKVGYSAIVHSFCQKGRM 427
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A +M G V A++ G +E K+I + K +G +PN+ +Y
Sbjct: 428 DEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYK-HGCKPNTVSYTA 486
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKC 246
++ C SG S ++ PNA +G ++ G +E K + + +M+EK
Sbjct: 487 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKG 546
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ V + N+ IQSLC+ ++ EAK L+ L++G N+ + +IHGF + G++E A
Sbjct: 547 FFPTPVEI-NLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAA 605
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M G PD+ + L + G + A ++ ++KG P T +S++
Sbjct: 606 LSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHR 665
Query: 367 LASISKVAEANELIGLMKKRFP 388
+ +V + L+ M KR P
Sbjct: 666 YSQWGRVDDMLNLLEKMLKRQP 687
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 118/294 (40%), Gaps = 8/294 (2%)
Query: 112 RFHVHSIVLYGQANMIDH------AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
R+ H +V Y +++ A + M + G+ +A +++ +
Sbjct: 195 RYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNA 254
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
R+ T K G+EP+ N I + G L M+ I+P+ + L+
Sbjct: 255 LRVLTLMQKA-GVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIK 313
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIK 284
G+ ++ ED +++ + G Y + LCK K+ EE K L++ M+ + +
Sbjct: 314 GYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLI 373
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ TY LIH K G+ + A + G D + + CQ G + A +
Sbjct: 374 PDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSL 433
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
++G P T ++V G + ++ EA +++ M K K + AL
Sbjct: 434 VIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTAL 487
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
K EEVK + + + P+ TYN +I + G + + L E + K +
Sbjct: 354 KKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVG 413
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ ++ F ++ + ++ ++ M G V Y + C+L R +EAK +L M
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMY 473
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
G KPN +Y L++G G A+++ P++ + + L + G+
Sbjct: 474 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLS 533
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
A + R + KG+ P + L+ L KV EA + +
Sbjct: 534 EACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYL 574
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 65/178 (36%), Gaps = 33/178 (18%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE------ 230
G N + VI FC+ GD + S+L +M P+A + L K+
Sbjct: 581 GCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEA 640
Query: 231 -----------------------HKYEDVGKV---LQMMEKCGIASGV-NVYNIRIQSLC 263
H+Y G+V L ++EK VYN I+ LC
Sbjct: 641 AELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLC 700
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
EEA+ LL +L K + +T L+ + K+G A K+ M PD
Sbjct: 701 DFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPD 758
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 147/319 (46%), Gaps = 8/319 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ +S + + QLLE+ + L N+ + I Y + D A
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGK-GLMPNKFSYTPLIHAYCKQGGYDRASNW 401
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKS 191
EM + G + + AL+ G +++ EV T K+ G+ P++ YN ++
Sbjct: 402 LIEMTERGHKPDLVTYGALVHGLVVAG---EVDVALTIREKMLERGVFPDAGIYNILMSG 458
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ + +LAEM +S+ P+A + L+ GF + ++ K+ ++ + G+ G
Sbjct: 459 LCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 518
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I+ CK ++A A ++ M R + P+ TY +I G+ K+ +L+GA+K+F
Sbjct: 519 IVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFR 578
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M C+P+ + C+ G+ +LK+ R A G VP+ T L+ +
Sbjct: 579 EMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEA 638
Query: 372 KVAEANELIG--LMKKRFP 388
K+ +A LM K P
Sbjct: 639 KLIDAASFFEEMLMNKCVP 657
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 1/234 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + E +F E K+ G P ETY +I FC+ GD ++ +L EM
Sbjct: 243 NTLIDGYCKKGDMEMANGLFIEL-KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMN 301
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ + N + ++ YK + ++ M +CG + YN I C+ +
Sbjct: 302 SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVS 361
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA LL+ L +G+ PN +Y LIH + K+G + A MT G +PD +
Sbjct: 362 EADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALV 421
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ L GE + AL + + +G P L++GL K+ A L+ M
Sbjct: 422 HGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM 475
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 2/290 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ ++ + F AI +LL E+ +R L N + + I + I A++T E
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSR-GLTVNVQVYNTIIDARYKHGHIVKAVETIEG 334
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M + G + + N L+ G E ++ E G+ PN +Y +I ++C+ G
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLL-EQALGKGLMPNKFSYTPLIHAYCKQG 393
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ L EM + +P+ +G L+ G + + + + M + G+ +YN
Sbjct: 394 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 453
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + LCK + AK LL ML + + P+ Y L+ GF + GNL+ A+KLF
Sbjct: 454 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 513
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
G P + C+ G + A+ + P T +++ G
Sbjct: 514 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDG 563
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 110/256 (42%), Gaps = 15/256 (5%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + FE + G+ + NA++ G ++ K + + P+ TY+
Sbjct: 500 LDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH-LAPDEFTYS 558
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI + + D + EM + +PN + L+ GF ++ K+ + M+ C
Sbjct: 559 TVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQAC 618
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V Y+I I S CK + +A + + ML PN T+ +L++GF K G +
Sbjct: 619 GLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAIS 678
Query: 307 KK--------------LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+K F M + G P S + LCQ G + TAL++ +KG
Sbjct: 679 EKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKG 738
Query: 353 WVPHFSTMKSLVTGLA 368
+P + +L+ G+
Sbjct: 739 CIPDSVSFVALLHGVC 754
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TYN +I C G S +L + K + PN + L+ + K+ Y+
Sbjct: 339 GCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRA 398
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
L M + G + Y + L + A + + ML RG+ P+ Y L+ G
Sbjct: 399 SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSG 458
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K+ L AK L A M + PD++ + + G + A K+ ++ KG P
Sbjct: 459 LCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 518
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+++ G + +A I MKKR
Sbjct: 519 IVGYNAMIKGYCKFGMMKDAMACINRMKKR 548
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 5/289 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P++ A+S + L+++ F+ + +LE ++ E + I Y + +++ A+
Sbjct: 91 PINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSI-VIQAYSDSGLVEKAL 149
Query: 132 QTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI-EPNSETYNKVI 189
+ + + K Y V A N+LL + E ++++ E ++ G + + Y+ I
Sbjct: 150 ELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCI 209
Query: 190 --KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
K C+ G ++ + + PN + L+ G+ K+ E + ++ G
Sbjct: 210 MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKG 269
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V Y I CK + LL M SRG+ N+ Y +I K G++ A
Sbjct: 270 FLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAV 329
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ M GC+PD + C+ G+ A ++ ++ KG +P+
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPN 378
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 15/209 (7%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + +D A + F EM K + +V +L+ G + +IF E + G+ P
Sbjct: 564 YVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREM-QACGLVP 622
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF------------- 227
N TY+ +I SFC+ S EM PN F L+ GF
Sbjct: 623 NVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGN 682
Query: 228 -YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++E+K M G A YN + LC+ A L + M S+G P+
Sbjct: 683 EFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPD 742
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
++ L+HG EG + K + + N
Sbjct: 743 SVSFVALLHGVCLEGRSKEWKNIVSCNLN 771
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 108/275 (39%), Gaps = 56/275 (20%)
Query: 167 RIFTEFP------KVYGIEPNSETYNKVIKSFCESG---DSSSVYSILAEMRRKSIRPNA 217
R+F+E +V + P E + VI+++ +SG + +Y + ++ + P+
Sbjct: 108 RVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV--LKTYTYFPDV 165
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN----IRIQSLCKLKRSEEAKA 273
LL K + E K+ M + A V N I ++ LCK + EE +
Sbjct: 166 IACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRK 225
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L++ +G PN+ Y LI G+ K+G++E A LF + G P + C
Sbjct: 226 LIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFC 285
Query: 334 QGGEYET-----------------------------------ALKVCRASMAKGWVPHFS 358
+ G+++ A++ + G P
Sbjct: 286 KKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIV 345
Query: 359 TMKSLVTGLASISKVAEANELI------GLMKKRF 387
T +L++G KV+EA++L+ GLM +F
Sbjct: 346 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKF 380
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 17/217 (7%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N Y+ ++K S S + +L MR + + P +++ Y D G V
Sbjct: 93 NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVI------QAYSDSGLVE 146
Query: 241 QMMEKCGIASGVNVY-------NIRIQSLCKLKRSEEAKALLDGMLSRGIKPN--LDTYK 291
+ +E Y N + L KL R E A+ L D ML + +D Y
Sbjct: 147 KALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYS 206
Query: 292 H--LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
++ G KEG LE +KL GC P+ + C+ G+ E A +
Sbjct: 207 TCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELK 266
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KG++P T +++ G + L+ M R
Sbjct: 267 LKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSR 303
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 112/245 (45%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
N HA + M ++G +V + NA L + + + + E + + PN
Sbjct: 165 AHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPN 224
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
T N +I+++C G+ + +L +M + PN F L++G+ + + KV
Sbjct: 225 VYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKS 284
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+M + G+ V +N I CK ++ EA + + M + P++ TY L++G+G+ G
Sbjct: 285 LMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVG 344
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ E +++ M G + D + LC+ G+ + A R + VP+ ST
Sbjct: 345 DSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFS 404
Query: 362 SLVTG 366
+L+TG
Sbjct: 405 ALITG 409
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 7/263 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCI---LSKNYEEVKRIFTEFPKVYGIEPNSE 183
+ E+M GL +V + N L+ G L +VK + E G++PN
Sbjct: 241 VQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVE----NGVQPNVV 296
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T+N +I FC+ + EM+ ++ P+ + LL G+ + E +V + M
Sbjct: 297 TFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEM 356
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G+ + + YN I LCK ++++A + + + PN T+ LI G N
Sbjct: 357 MRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNS 416
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A ++ SM GC P+ F M C+ +++ A++V R + + P STM L
Sbjct: 417 ERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSEL 476
Query: 364 VTGLASISKVAEANELIGLMKKR 386
GL K A L M+ R
Sbjct: 477 CDGLCRCGKNQLALALCSEMEVR 499
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 1/197 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + F EM + SV N LL G + E R++ E + G++ + TYN
Sbjct: 311 LHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMR-NGLKADILTYN 369
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G + + E+ ++++ PNA+ F L+ G + E + + M +
Sbjct: 370 ALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRNNSERAFLIYRSMVRS 429
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + + I + CK + + A +L ML R + P+L T L G + G + A
Sbjct: 430 GCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSPDLSTMSELCDGLCRCGKNQLA 489
Query: 307 KKLFASMTNGGCEPDSY 323
L + M PD +
Sbjct: 490 LALCSEMEVRRLLPDGF 506
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 1/166 (0%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F L +K+ + +M++ G + V N + SL +L+R++ A A +
Sbjct: 157 FDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIR 216
Query: 280 SRG-IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
R + PN+ T +I + G ++ + M + G P+ F C G +
Sbjct: 217 RRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLF 276
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
ALKV + G P+ T +L+ G K+ EAN + MK
Sbjct: 277 GLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMK 322
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 53/123 (43%)
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
++ V N+ I++ C L ++ +L+ M+ G+ PN+ ++ LI G+ +G A
Sbjct: 221 VSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLAL 280
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
K+ + M G +P+ F C+ + A +V P T +L+ G
Sbjct: 281 KVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGY 340
Query: 368 ASI 370
+
Sbjct: 341 GQV 343
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 119/260 (45%), Gaps = 16/260 (6%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M D +QT M G++ V N L+ G + +E +++ E K G P+ Y
Sbjct: 170 MADSLLQT---MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL-ERMKASGCAPDVVAY 225
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ + C+SG + + +L +MR PN + +L G K K + L+MME+
Sbjct: 226 SSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK---IDTALEMMEQ 282
Query: 246 CGIASGVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+ G + Y+ + LCKL R++EA+++++ M G +P++ TY L++G K G
Sbjct: 283 MASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAG 342
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR-----ASMAKGWVPH 356
+E A + M GC+P++ + + LC G A ++ P
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPS 402
Query: 357 FSTMKSLVTGLASISKVAEA 376
ST +L+ GL ++ +A
Sbjct: 403 VSTYNALIGGLCKAGRIDDA 422
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
E M G++ +V + N LL G C L + +E + + + P+ TY+ ++ +
Sbjct: 33 LETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGY 92
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++G +L E+ + +RP+A + ++A K + + ++L+ M + G +
Sbjct: 93 CKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTL 152
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I C+ K E A +LL M + G+K ++ TY L+ G K G L+ A++L
Sbjct: 153 ITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLER 212
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M GC PD + F Y LC+ G+ A +V P+ T +++ GL K
Sbjct: 213 MKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGK 272
Query: 373 VAEANELIGLM 383
+ A E++ M
Sbjct: 273 IDTALEMMEQM 283
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 12/271 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + L +A QLLE +K PD+ F V+ + G+ + +A
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSF-VYGLCKSGK---VLNA 241
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q E+M +V N +L G S + + + G N Y+ V+
Sbjct: 242 HQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVD 301
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ G + S++ M R RP+ + L+ G K K E+ + ++ M G
Sbjct: 302 GLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-----IKPNLDTYKHLIHGFGKEGNLEG 305
Y + LC R EA+ +++ M S G P++ TY LI G K G ++
Sbjct: 362 NAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDD 421
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
A K F M + GC+PD + L + G
Sbjct: 422 ALKFFQRMRSQGCDPDGVSYSTIVEGLARSG 452
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 3/250 (1%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
MD+ G + NAL+ G + +R+ E GI+PN +YN +++ C+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLL-ETMAARGIQPNVVSYNGLLEGLCKLE 59
Query: 197 DSSSVYSILAEMRRKSIR--PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
++ +M + R P+ + LL+G+ K K E+ ++L+ + G+ +
Sbjct: 60 RWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y + SLCK R EA LL+ M+ G P L T+ LI G +E NLE A L +M
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA 179
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G + D + LC+ G + A ++ A G P S V GL KV
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 375 EANELIGLMK 384
A++++ M+
Sbjct: 240 NAHQVLEQMR 249
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 134/335 (40%), Gaps = 42/335 (12%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGL 142
L + ++ +L+ ++ +R R +S +L Y +A ++ + + +E+ GL
Sbjct: 55 LCKLERWHEAEELVRDMISRGG-RSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGL 113
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-YGIEPNSETYNKVIKSFCESGDSSSV 201
R DAL + L K+ + + + G P T+N +I C +
Sbjct: 114 RP--DALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMA 171
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
S+L M ++ + + L+ G K + ++ ++L+ M+ G A V Y+ +
Sbjct: 172 DSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYG 231
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG---------------- 305
LCK + A +L+ M PN+ TY ++ G K G ++
Sbjct: 232 LCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL 291
Query: 306 --------------------AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
A+ + +M GC PD + LC+ G+ E A++
Sbjct: 292 NVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAV 351
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
R +G P+ T SLV GL S ++AEA ++
Sbjct: 352 REMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 122/300 (40%), Gaps = 39/300 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-----FPKVY----- 176
I+ A + + EM G+R SV +LN++L G + ++++ +F + V+
Sbjct: 314 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTL 373
Query: 177 -----------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
GI PN +YN +I C + ++ + EM
Sbjct: 374 LSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGF 433
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PNA F +L+ G++K+ E+ + M+ I I I+ LCK RS E +
Sbjct: 434 TPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRD 493
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L + +S+G P Y +I GF KEGN+ A ++ M G P + + C
Sbjct: 494 LFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFC 553
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI------GLMKKRF 387
+G + ALK+ KG +L+ G + A+EL+ GL RF
Sbjct: 554 KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 613
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F + G + N ++ G I N ++ E +V GI P++ TY +I FC
Sbjct: 495 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV-GITPSTVTYTSLIDGFC 553
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +L +M+RK ++ + +G L+ GF K + ++L + G++
Sbjct: 554 KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 613
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I + EEA L M++ GI +L TY LI G K G L A + M
Sbjct: 614 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM 673
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G PD + LC G++E A K+ K +P +L+ G
Sbjct: 674 LSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 726
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 1/260 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + I++A F M + + L ++ G + E + +F +F G P
Sbjct: 447 YFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVS-QGFVP 505
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
YN +I F + G+ + ++ EM I P+ + L+ GF K + + K+L
Sbjct: 506 TCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLL 565
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M++ G+ + Y I CK + + A LL+ + G+ PN Y +I GF
Sbjct: 566 NDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNM 625
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
N+E A L+ M N G D + L + G A + ++KG +P
Sbjct: 626 NNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAH 685
Query: 361 KSLVTGLASISKVAEANELI 380
L+ GL + + A +++
Sbjct: 686 TVLINGLCNKGQFENARKIL 705
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N ID A++ +M + GL+ + A L+ G ++ + + E + G+ P
Sbjct: 552 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL-RGAGLSP 610
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N YN +I F + + +M + I + + L+ G K + +
Sbjct: 611 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIH 670
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M GI + + I LC + E A+ +L+ M + + P++ Y LI G KE
Sbjct: 671 TEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKE 730
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
GNL+ A +L M + G PD+ TY + G+++
Sbjct: 731 GNLQEAFRLHDEMLDRGLVPDN-----ITYDILVNGKFK 764
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 5/208 (2%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+E + E Y+ + C +S S+L EMR P F ++ KE
Sbjct: 185 KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 244
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ ++ M CG + + V ++ C A L++ + G+ PN TY L
Sbjct: 245 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 304
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF--FMFTYFLCQGGEYETALKVCRASMAK 351
I G K GN+E A + ++ M G Y + Y CQ ++ A + ++
Sbjct: 305 IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ--SWQNAFTMFNDALES 362
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANEL 379
G F T +L++ L K+ EA L
Sbjct: 363 GLANVF-TFNTLLSWLCKEGKMNEACNL 389
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+EGN+ A++ F G E D + +F + LC AL + R A GW+P
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229
Query: 359 TMKSLVTGLASISKVAEA 376
T S++T VAEA
Sbjct: 230 TFTSVITACVKEGNVAEA 247
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 122/300 (40%), Gaps = 39/300 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-----FPKVY----- 176
I+ A + + EM G+R SV +LN++L G + ++++ +F + V+
Sbjct: 196 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTL 255
Query: 177 -----------------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
GI PN +YN +I C + ++ + EM
Sbjct: 256 LSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGF 315
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
PNA F +L+ G++K+ E+ + M+ I I I+ LCK RS E +
Sbjct: 316 TPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRD 375
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L + +S+G P Y +I GF KEGN+ A ++ M G P + + C
Sbjct: 376 LFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFC 435
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI------GLMKKRF 387
+G + ALK+ KG +L+ G + A+EL+ GL RF
Sbjct: 436 KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 495
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 1/233 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F + G + N ++ G I N ++ E +V GI P++ TY +I FC
Sbjct: 377 FNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV-GITPSTVTYTSLIDGFC 435
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +L +M+RK ++ + +G L+ GF K + ++L + G++
Sbjct: 436 KGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRF 495
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I + EEA L M++ GI +L TY LI G K G L A + M
Sbjct: 496 IYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEM 555
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G PD + LC G++E A K+ K +P +L+ G
Sbjct: 556 LSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAG 608
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 1/254 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I++A F M + + L ++ G + E + +F +F G P YN
Sbjct: 335 IENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVS-QGFVPTCMPYN 393
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I F + G+ + ++ EM I P+ + L+ GF K + + K+L M++
Sbjct: 394 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + Y I CK + + A LL+ + G+ PN Y +I GF N+E A
Sbjct: 454 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 513
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L+ M N G D + L + G A + ++KG +P L+ G
Sbjct: 514 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 573
Query: 367 LASISKVAEANELI 380
L + + A +++
Sbjct: 574 LCNKGQFENARKIL 587
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 6/219 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N ID A++ +M + GL+ + A L+ G ++ + + E + G+ P
Sbjct: 434 FCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL-RGAGLSP 492
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N YN +I F + + +M + I + + L+ G K + +
Sbjct: 493 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIH 552
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M GI + + I LC + E A+ +L+ M + + P++ Y LI G KE
Sbjct: 553 TEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKE 612
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
GNL+ A +L M + G PD+ TY + G+++
Sbjct: 613 GNLQEAFRLHDEMLDRGLVPDN-----ITYDILVNGKFK 646
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 6/259 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ NM A + +M G+ L+ +L C+ N E ++ F + K G+E +
Sbjct: 17 RKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQ-AKARGVELDQ 75
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
E Y+ + C +S S+L EMR P F ++ KE + ++
Sbjct: 76 EAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDD 135
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M CG + + V ++ C A L++ + G+ PN TY LI G K GN
Sbjct: 136 MVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGN 195
Query: 303 LEGAKKLFASMTNGGCEPDSYCF--FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+E A + ++ M G Y + Y CQ ++ A + ++ G F T
Sbjct: 196 IEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ--SWQNAFTMFNDALESGLANVF-TF 252
Query: 361 KSLVTGLASISKVAEANEL 379
+L++ L K+ EA L
Sbjct: 253 NTLLSWLCKEGKMNEACNL 271
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%)
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ NI + ++ + + EA+ L + ML G+ + T ++ KEGN+ A++ F
Sbjct: 5 IQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFL 64
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G E D + +F + LC AL + R A GW+P T S++T
Sbjct: 65 QAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEG 124
Query: 372 KVAEA 376
VAEA
Sbjct: 125 NVAEA 129
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 8/267 (2%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
SIV +G N I AM +++ G +V N ++ ++ + +
Sbjct: 142 SIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVL 201
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
K+ GI P+ TYN +I SG IL++M R I P+ F ++ F K
Sbjct: 202 NHMEKM-GIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGK 260
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E + + K M + + + YN I LC +EAK +L+ M+S+G PN T
Sbjct: 261 EGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVT 320
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y L++G+ K ++ A K+ M++ G + D++ + CQ G++ A KV +
Sbjct: 321 YNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMV 380
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G +P T L+ GL K+ +A
Sbjct: 381 SCGVLPDIYTFNMLLDGLCEHGKIEKA 407
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ M+K G+R V N+L+ S + RI ++ ++ GI P+ T++
Sbjct: 194 VDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRM-GIHPDVITFS 252
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I F + G EM ++S+ PN + L+ G ++ KVL M
Sbjct: 253 AMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSK 312
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G YN + CK KR ++A +L M G+ + TY L G+ + G A
Sbjct: 313 GFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAA 372
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+K+ A M + G PD Y F M LC+ G+ E AL V T ++ G
Sbjct: 373 EKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKG 432
Query: 367 LASISKVAEA 376
+ +KV +A
Sbjct: 433 MCKANKVEDA 442
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 132/313 (42%), Gaps = 43/313 (13%)
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
D R+ R +HSI + A+ F +M + S+ + LL+ K YE V
Sbjct: 40 DYRERLRSGLHSI-------KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAV 92
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+F ++ GI + +++ +I FC S S L +M + P+ FG L+
Sbjct: 93 ISLFRHI-EILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVN 151
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
GF ++ ++ ++ + G V +YN I SLC+ ++ + A +L+ M GI+P
Sbjct: 152 GFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRP 211
Query: 286 NLDTYKHLI----HG-------------------------------FGKEGNLEGAKKLF 310
++ TY LI H FGKEG L AKK +
Sbjct: 212 DVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQY 271
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M +P+ + LC G + A KV ++KG+ P+ T +LV G
Sbjct: 272 DEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKS 331
Query: 371 SKVAEANELIGLM 383
+V +A +++ +M
Sbjct: 332 KRVDDAMKILCVM 344
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 111/248 (44%), Gaps = 2/248 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ +++L + + +++L ++ R + + I ++G+ + A +
Sbjct: 212 DVITYNSLITRLFHSGKWGVSARILSDM-MRMGIHPDVITFSAMIDVFGKEGQLLEAKKQ 270
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++EM + + ++ N+L+ G + +E K++ F G PN+ TYN ++ +C
Sbjct: 271 YDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVL-NFMVSKGFFPNAVTYNTLVNGYC 329
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S IL M + + + L G+ + ++ KVL M CG+ +
Sbjct: 330 KSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIY 389
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N+ + LC+ + E+A L+ + + TY +I G K +E A LF S+
Sbjct: 390 TFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSL 449
Query: 314 TNGGCEPD 321
G PD
Sbjct: 450 ALKGVSPD 457
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 64 GASLAPESPLDRMAFSIAVSKLS-QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG 122
G S S + RM V S + F QLLE K ++ Q R +IV Y
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQ--RSVDPNIVTYN 287
Query: 123 QA-------NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
++D A + M G + N L+ G SK ++ +I
Sbjct: 288 SLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSH- 346
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G++ ++ TYN + + +C++G ++ +LA M + P+ F +LL G + K E
Sbjct: 347 DGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEK 406
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
L+ ++K G+ YNI I+ +CK + E+A L + +G+ P++ TY ++
Sbjct: 407 ALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMI 466
Query: 296 GFGKEGNLEGAKKLFASM 313
G ++ A +L+ M
Sbjct: 467 GLRRKRLWLEAHELYRKM 484
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G Y + ++S S + ++ +M P+ DF LL K KYE
Sbjct: 32 FGAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEA 91
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V + + +E GI+ + ++ I C+ R A + L M+ G +P++ T+ L++
Sbjct: 92 VISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVN 151
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GF ++ A L + G EP+ + LC+ + +TAL V G P
Sbjct: 152 GFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRP 211
Query: 356 HFSTMKSLVTGL 367
T SL+T L
Sbjct: 212 DVITYNSLITRL 223
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 113/238 (47%), Gaps = 1/238 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A++ F+ M G +V + N L+ G + ++ +F E + I PN+ TYN
Sbjct: 328 MDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI-PNTVTYN 386
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C G ++ EM P+ + +LL K+ ++ +L+ +E
Sbjct: 387 TLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGS 446
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + +Y I I +C+ E A+ + + S+G++PN+ TY +I+G + G L+ A
Sbjct: 447 NMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEA 506
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
KLF M GC PD + T L Q E A+++ + +A+G+ ST LV
Sbjct: 507 NKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 110 NERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+ RFH S+ N +D A+ +F M S N LL +K Y V +
Sbjct: 35 HNRFHSKSL----NFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLS 90
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ +GI P+ T N +I SFC +S+LA++ + ++P+ F L+ G
Sbjct: 91 NQMDS-FGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCV 149
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K D + M G V Y I LCK+ + A LL M +P++
Sbjct: 150 EGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVV 209
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y +I K+ + A LF+ M G PD + + + LC E++ + +
Sbjct: 210 YTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMI 269
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+P ++V L K+ EA++++ +M R
Sbjct: 270 NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIR 306
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 11/253 (4%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKR---IFTEFPKVY--GIEPNSETYNKVIK 190
+MD +G+ V LN IL ++ + R F+ K+ G++P++ T+ +I+
Sbjct: 92 QMDSFGIPPDVYTLN------ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIR 145
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C G + +M + +PN +G L+ G K ++L+ ME+
Sbjct: 146 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP 205
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V VY I SLCK ++ EA L M+ +GI P++ TY LIH + L
Sbjct: 206 DVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLL 265
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N PD F LC+ G+ A V + +G P+ T +L+ G
Sbjct: 266 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 325
Query: 371 SKVAEANELIGLM 383
S++ EA ++ M
Sbjct: 326 SEMDEAVKVFDTM 338
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 2/219 (0%)
Query: 164 EVKRIFTEFPKVYG--IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+V F F K+ G I P+ TY +I S C + V ++L +M I P+ F
Sbjct: 222 QVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFS 281
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
++ KE K + V+ MM G+ V YN + C +EA + D M+
Sbjct: 282 TVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN 341
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G PN+ +Y LI+G+ K ++ A LF M P++ + + LC G + A
Sbjct: 342 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDA 401
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + +A G +P +T + L+ L S + EA L+
Sbjct: 402 IALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 440
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ G+EPN TYN ++ C + + M PN + L+ G+ K + +
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ + M + + YN + LC + R ++A AL M++ G P+L TY+ L+
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K+ +L+ A L ++ +PD + + +C+ GE E A + +KG
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLR 484
Query: 355 PHFSTMKSLVTGLASISKVAEANEL 379
P+ T ++ GL + EAN+L
Sbjct: 485 PNVRTYTIMINGLCRRGLLDEANKL 509
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I P+ ++ V+ + C+ G + + ++ M + + PN + L+ G + + ++
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
KV M G A V YN I CK++R ++A L + M + + PN TY L+HG
Sbjct: 333 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGL 392
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
G L+ A LF M G PD + + +LC+ + A+ + + P
Sbjct: 393 CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDI 452
Query: 358 STMKSLVTGLASISKVAEANEL 379
++ G+ ++ A ++
Sbjct: 453 QIYTIVIDGMCRAGELEAARDI 474
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 130/313 (41%), Gaps = 9/313 (2%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANM 126
P S +D +++K Q ++S ++ PD+ + +I++ + N
Sbjct: 64 PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDV------YTLNILINSFCHLNR 117
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
A ++ K GL+ L+ G + + +F + G +PN TY
Sbjct: 118 PGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG-EGFQPNVVTYG 176
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G++++ +L M + + +P+ + ++ K+ + + + M
Sbjct: 177 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 236
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI+ + Y I SLC L + LL+ M++ I P++ + ++ KEG + A
Sbjct: 237 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 296
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M G EP+ + C E + A+KV + G+ P+ + +L+ G
Sbjct: 297 HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 356
Query: 367 LASISKVAEANEL 379
I ++ +A L
Sbjct: 357 YCKIQRMDKATYL 369
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 80/214 (37%), Gaps = 1/214 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A FEEM + L + N L+ G ++ +F E +G P
Sbjct: 357 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEM-VAHGQIP 415
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY ++ C+ ++L + ++ P+ + +++ G + + E +
Sbjct: 416 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 475
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V Y I I LC+ +EA L M G P+ TY + G +
Sbjct: 476 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 535
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
A +L M G D + LC
Sbjct: 536 KEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 569
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 1/149 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D AM + ++ + + ++ G + E + IF+ G+ PN TY
Sbjct: 433 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSS-KGLRPNVRTYT 491
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G + EM P+ + + G + + ++LQ M
Sbjct: 492 IMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLAR 551
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALL 275
G ++ V+ + ++ LC K + K +L
Sbjct: 552 GFSADVSTTTLLVEMLCDDKLDQSVKQIL 580
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 133/262 (50%), Gaps = 7/262 (2%)
Query: 95 SQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNAL 152
+Q+ + T+ D+ E +++I++ G A + I A+++++++ + G+ ++ N+L
Sbjct: 499 AQMYFDSVTKSDVA--EEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSL 556
Query: 153 LLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
+ G C K E VK + T KV+G+ P S TY ++ +CE GD S++ +L EM K
Sbjct: 557 IYGFCKKGKLAEAVKLLDT--IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK 614
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+I+P + +++ G KE + + ++L+ M G+ YN IQS CK ++A
Sbjct: 615 AIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKA 674
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L + ML ++P+ TY LI+G GNL+ A +L ++ + +
Sbjct: 675 FQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA 734
Query: 332 LCQGGEYETALKVCRASMAKGW 353
C G+ + AL + +G+
Sbjct: 735 HCAKGDVQNALVFFHQMVERGF 756
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 36/293 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A F M KYGL V + N LL G ++ + EE FT + +G+EP+ TYN
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE-FTNDMENHGVEPDIVTYN 344
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ F G S + ++ M + P+ + +L+ G + E+ K+ + M
Sbjct: 345 ILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQ 404
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + Y + + SLCK R +EA LL M G+KP+L TY LIHG K G +E A
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEA 464
Query: 307 KKLFASMTNGGCEPDSY-CFFMFTYFLCQG------------------------------ 335
+L+ M + P+S+ C + + +G
Sbjct: 465 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG 524
Query: 336 ----GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G A++ + + KG P T SL+ G K+AEA +L+ +K
Sbjct: 525 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 577
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 5/283 (1%)
Query: 110 NERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
N ++I++ G M I+ + + E+M GL+ S+ LL S +E
Sbjct: 372 NPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVI 431
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E +V G++P+ TY+ +I C+ G + EM K I PN+ +++G
Sbjct: 432 LLHEM-EVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 490
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+++ + + K +A + +YNI I KL EA ++ +GI P +
Sbjct: 491 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 550
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ LI+GF K+G L A KL ++ G P S + C+ G+ + +
Sbjct: 551 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 610
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
AK P T +V GL ++ E+ +L+ M R FP
Sbjct: 611 MEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 653
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 113/268 (42%), Gaps = 10/268 (3%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A M+ A+ +M L+ S+ N+LL ++ + + ++ E K G+
Sbjct: 178 YSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL---RHTDIMWDVYNEI-KASGVPQ 233
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T +I C + L E + P+ F L++GF K +
Sbjct: 234 NEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFF 293
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
MM K G+ V YNI + LC EEA + M + G++P++ TY L +GF
Sbjct: 294 CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRIL 353
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + GA K+ M G PD + + CQ G E + K+ +++G T
Sbjct: 354 GLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTY 413
Query: 361 KSLVTGLASISKVAEA------NELIGL 382
L++ L ++ EA E+IGL
Sbjct: 414 TVLLSSLCKSGRIDEAVILLHEMEVIGL 441
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 2/213 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ ++N ++ FC+ G S M + + P+ + +LL G E+ +
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
ME G+ + YNI L A ++ ML G+ P+L TY LI G +
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
GN+E + KL M + G + + + LC+ G + A+ + G P T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447
Query: 360 MKSLVTGLASISKVAEANELIGLM--KKRFPKS 390
L+ GL V EA EL M K+ +P S
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN VI+SFC++ D + + +M + S++P+ + +L+ G +D
Sbjct: 650 GLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDA 709
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L ++ I Y I++ C + A M+ RG + ++ Y +I+
Sbjct: 710 DRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINR 769
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPD-SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K + AK F M G PD C M F + G+ + ++ + G +P
Sbjct: 770 LCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFH-RSGDPNSVFEIFAMMIKCGLLP 828
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 3/180 (1%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+LA+M+ +++ + + LL Y + + V ++ G+ I I LC
Sbjct: 190 VLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDVYNEIKASGVPQNEYTNPILIDGLC 246
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+ R ++A L P++ ++ L+ GF K G+++ AK F M G PD Y
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + + LC G E AL+ G P T L G + ++ A +++ M
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRM 366
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 10/308 (3%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV--HSIVLYGQANMIDH 129
P D + ++ V LS+A Q+L+E+ + + N V S+ L + +D
Sbjct: 146 PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCL---GDRVDD 202
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + EEM G+ + +AL+ G C + E V + E + G P+ TY+ V
Sbjct: 203 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTR-RGFTPDIVTYSTV 261
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C++G I EM S P A + L+ G+ + ++ ++L M
Sbjct: 262 IDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNC 318
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A V Y + + CK+ R ++A L M++ + P++ T+ L+ G EG +E A +
Sbjct: 319 APDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 378
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L +T GC P Y + C+ + A ++ ++G+VP+ T LV G
Sbjct: 379 LLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 438
Query: 369 SISKVAEA 376
+ +A
Sbjct: 439 RAGRTDQA 446
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 18/318 (5%)
Query: 76 MAFSIAVSKLSQANHFN-AISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDH 129
+ +S V L + + A++ LL E+ R PD+ +S V+ G +A +
Sbjct: 220 ITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIV------TYSTVIDGLCKAGRLRD 273
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ FEEM + N+L+ G + + +E R+ + P+ TY ++
Sbjct: 274 AVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD-DNCAPDVITYTTLM 329
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC+ G Y + +M + P+ F L+ G E + ED ++L+ + + G
Sbjct: 330 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 389
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN + CK + +A+ L+ SRG PN TY L+ G + G + A +
Sbjct: 390 PTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 449
Query: 310 FASM-TNGGCEPDSYCFF-MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ + GG P S + + LC+ G + A++ + +G+VP +T ++V L
Sbjct: 450 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 509
Query: 368 ASISKVAEANELIGLMKK 385
+ +A+EL+ M K
Sbjct: 510 CKAHQPQQAHELLEEMIK 527
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 7/277 (2%)
Query: 113 FHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
F ++ +++G +A + A+Q +EM L ++ L ++ + +
Sbjct: 149 FLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVE 208
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGD-SSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E G+ N+ TY+ ++ C+ +V +L E+ R+ P+ + ++ G K
Sbjct: 209 EMLH-RGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCK 267
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ D + + E+ A YN I C+ +EA LL M+ P++ T
Sbjct: 268 AGRLRDA---VDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y L+ F K G L+ A +LF M PD F LC G E AL++
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+G P T +V G ++V +A EL+ + R
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSR 421
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ N ++ C++ D+++ ++ +M + T + L+ E +
Sbjct: 41 GLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAM 100
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
G +L M + G+ G ++N+ I LC+ R A + M + P+ TY L+HG
Sbjct: 101 GLLLDMKSR-GMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHG 158
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G L A ++ M + PD+ + LC G + A ++ + +G +
Sbjct: 159 LSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAAN 218
Query: 357 FSTMKSLVTGLASISKVAEANELI 380
T +LV GL ++ EA L+
Sbjct: 219 AITYSALVDGLCKCERLDEAVALL 242
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F++M L V +L+ G E+ + E + G P TYN
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR-RGCPPTIYTYN 396
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ +C+S ++A+ R + PN + +L+AG + + + + L +
Sbjct: 397 CVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 456
Query: 247 G--IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G + V +Y I + +LC+ R+++A + M+ RG P T+ ++ K +
Sbjct: 457 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 516
Query: 305 GAKKLFASMTNGGCEP 320
A +L M G P
Sbjct: 517 QAHELLEEMIKYGHTP 532
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 130/312 (41%), Gaps = 16/312 (5%)
Query: 46 IARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRP 105
ARL R GA P ++I + + + A S L EE+K R
Sbjct: 108 FARLGKTDGMKRFFKDMIGAGSKPTV----FTYNIMIDCMCKEGDIEAASGLFEEMKFRG 163
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI-----LSK 160
+ ++ I YG+ +D + FEEM V N L+ C L K
Sbjct: 164 LIPDTVTYN-SMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLI-NCFCKFGKLPK 221
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
E F E K G++PN +Y+ ++ +FC+ +MRR + PN +
Sbjct: 222 GLE----FFREM-KQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTY 276
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ + K D ++ M + G+ V Y I LC ++R +EA+ L M++
Sbjct: 277 TSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVT 336
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G+ PNL +Y LIHGF K N++ A +L M G +PD + F + LC + E
Sbjct: 337 AGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEA 396
Query: 341 ALKVCRASMAKG 352
A V KG
Sbjct: 397 AKVVMNEMQEKG 408
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 111/261 (42%), Gaps = 1/261 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ +M + A+Q F +M + + + N LL + +KR F + G +P
Sbjct: 75 EEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGA-GSKPTV 133
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I C+ GD + + EM+ + + P+ + ++ G+ K + +D +
Sbjct: 134 FTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M+ V YN I CK + + M G+KPN+ +Y L+ F KE
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A K + M G P+ + + C+ G A ++ G + T +
Sbjct: 254 MQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTA 313
Query: 363 LVTGLASISKVAEANELIGLM 383
L+ GL + ++ EA EL G M
Sbjct: 314 LIDGLCDVERIKEAEELFGKM 334
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%), Gaps = 3/254 (1%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSK-NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F++M G + +V N +++ C+ + + E +F E K G+ P++ TYN +I +
Sbjct: 121 FKDMIGAGSKPTVFTYN-IMIDCMCKEGDIEAASGLFEEM-KFRGLIPDTVTYNSMIDGY 178
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ G EM+ S P+ + L+ F K K + + M++ G+ V
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV 238
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+ + + CK ++A M G+ PN TY L+ + K GNL A +L
Sbjct: 239 VSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADE 298
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M+ G E + + LC + A ++ + G +P+ ++ +L+ G
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKN 358
Query: 373 VAEANELIGLMKKR 386
+ A EL+ MK R
Sbjct: 359 MDRALELLDEMKGR 372
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
++ F EM + GL+ +V + + L+ ++ + + + ++ G+ PN TY ++
Sbjct: 222 GLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRL-GLVPNEHTYTSLV 280
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
++C+ G+ S + + EM + + N + L+ G + ++ ++ M G+
Sbjct: 281 DAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVI 340
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y I K K + A LLD M RGIKP+L Y I +E AK +
Sbjct: 341 PNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVV 400
Query: 310 FASMTNGGCEPDSYCF--FMFTYF 331
M G + +++ + M YF
Sbjct: 401 MNEMQEKGIKANTFIYTTLMDAYF 424
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 1/182 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + +M+ A++ + +M + GL + +L+ N + R+ E +V G+E
Sbjct: 248 FCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQV-GVEW 306
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I C+ + +M + PN + L+ GF K + ++L
Sbjct: 307 NVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELL 366
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ GI + +Y I SLC L++ E AK +++ M +GIK N Y L+ + K
Sbjct: 367 DEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKS 426
Query: 301 GN 302
N
Sbjct: 427 EN 428
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 8/251 (3%)
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
DAL ++L I +EE + F++ + + P + + N ++ F G + +
Sbjct: 67 DALFSVL---IEEDMFEEALQCFSKMKRCR-VFPKTRSCNGLLHKFARLGKTDGMKRFFK 122
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+M +P + +++ KE E + + M+ G+ YN I K+
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVG 182
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
R ++ + M S +P++ TY LI+ F K G L + F M G +P+ +
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYS 242
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ + ALK G VP+ T SLV I +++A L M
Sbjct: 243 TLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMS-- 300
Query: 387 FPKSGDMWNAA 397
+ G WN
Sbjct: 301 --QVGVEWNVV 309
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 37/229 (16%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + F +M G+ ++ + AL+ G + +KN + + E K GI+P+ Y
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEM-KGRGIKPDLLLYG 382
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH--------------- 231
I S C + ++ EM+ K I+ N + L+ ++K
Sbjct: 383 TFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLEL 442
Query: 232 -----------------KYEDVGKVLQMMEKC----GIASGVNVYNIRIQSLCKLKRSEE 270
K + V K + + G+ + +Y I LCK + E
Sbjct: 443 DIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEA 502
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
A L + M +G+ P+ Y LI G K+GN+ A L M G E
Sbjct: 503 ATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVE 551
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I HA+ + ++ K GL + L+ G + E K IF + P+ Y + P YN
Sbjct: 259 IKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPR-YEVAPTVPVYN 317
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I SG + + E+ RK +RP+ +++ G + + + L++M++
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS 377
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA YN+ I CK +EA M G++PN+ TY LI G K G +E A
Sbjct: 378 GIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIA 437
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M G EP+ + + + G+ + A + + KG + T+ LV G
Sbjct: 438 MAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDG 497
Query: 367 LASISKVAEANELI 380
L ++V +A I
Sbjct: 498 LCRENRVQDAVRFI 511
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 5/223 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEP 180
+A+M+ + F+EM G+ SV N L+ C ++ +V + + + ++ I+P
Sbjct: 150 KAHMLARVWELFDEMLGRGMVPSVVTYNTLINAC---RHQGDVAKAWEVWDQMVARRIDP 206
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I + CE + EM+ +RPN + L++ +K +
Sbjct: 207 NVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFY 266
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ KCG+ ++ I LCK R EAK + M + P + Y LIHG +
Sbjct: 267 YDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRS 326
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
G + A F + PD + + LC GG+ + A +
Sbjct: 327 GYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATR 369
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 11/241 (4%)
Query: 104 RPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
R +LR +E SIV+ G + A + E M + G+ + A N L+ S N
Sbjct: 341 RKELRPDE--FTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGN 398
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+E T +V G+EPN TY+ +I ++G+ +I EM K + PN +
Sbjct: 399 LDEALVTCTRMSEV-GVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYT 457
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL---DGM 278
L+ G K + + + ME+ GI S ++ + LC+ R ++A + G
Sbjct: 458 ALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQ 517
Query: 279 LSRGIKPNLD---TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
P++ TY LI+G +G A F+ M + G PD + + + LC
Sbjct: 518 KKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCML 577
Query: 336 G 336
G
Sbjct: 578 G 578
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 14/256 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D SI V L ++ LE ++ + + N + I Y ++ +D A+ T
Sbjct: 347 DEFTCSIVVRGLCDGGQMQVATRFLEVMQ-QSGIALNAAAYNVLIDEYCKSGNLDEALVT 405
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + G+ +V ++L+ G + E I+TE G+EPN TY +I
Sbjct: 406 CTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEM-VAKGVEPNVVTYTALIHGHA 464
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG------ 247
++GD + + + EM K I NA +L+ G +E++ +D + + ME G
Sbjct: 465 KNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI--MEYSGQKKSEK 522
Query: 248 ---IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
IA+ V Y I L + EA M G+ P+ TY +I G G +
Sbjct: 523 NPSIANSVT-YMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 581
Query: 305 GAKKLFASMTNGGCEP 320
A L+A M G +P
Sbjct: 582 NAMMLYADMVKVGVKP 597
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 157/374 (41%), Gaps = 60/374 (16%)
Query: 57 RILDICCGAS--------LAPESPLDRMAFSIAVSK-----LSQANHFNAISQLLEEL-K 102
R+L+ C A A + P R SI V K LS+ F A+ L+EE+ K
Sbjct: 118 RVLNRCGDAGNLGYRFFVWAAKQP--RYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRK 175
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL---- 158
P L + E F V + + A+M+ A++ +EM K+G + + GC+L
Sbjct: 176 ENPQLIEPELFVV-LVQRFASADMVKKAIEVLDEMPKFGFEP-----DEYVFGCLLDALC 229
Query: 159 --------SKNYEEVK-------RIFTEFPKVY-------------------GIEPNSET 184
+K +E+++ R FT + G EP+
Sbjct: 230 KHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVD 289
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y ++ + +G + Y +L +MRR+ PNA + +L+ K + E+ KV ME
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME 349
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ + V Y + CK + ++ +LD M+ +G+ P+ TY H++ K+ + E
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
+L M PD + + C+ GE + A+++ G P T ++
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 365 TGLASISKVAEANE 378
GLAS + EA++
Sbjct: 470 NGLASQGCLLEASD 483
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A + A +M + G + + L+ EE ++F E + Y E
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER-YECEA 355
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY ++ FC+ G Y +L +M +K + P+ + ++ K+ +E+ +++
Sbjct: 356 DVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELM 415
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + + +YN+ I+ CKL +EA L + M G+ P +DT+ +I+G +
Sbjct: 416 EKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Query: 301 GNLEGAKKLFASMTNGG 317
G L A F M G
Sbjct: 476 GCLLEASDHFKEMVTRG 492
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 118/268 (44%), Gaps = 2/268 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ F EM G+ +V N+++ G ++ V + E I PN +
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD-SKIMPNVVIFT 288
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + C+ G + + ++ M ++ + P+ + L+ G + ++ KV M +
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A V Y+ I CK++R ++A L + M R + PN+ TY LIHG G L A
Sbjct: 349 GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDA 408
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M G PD + + +LC+ + A+ + +A P + ++ G
Sbjct: 409 IALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDG 468
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMW 394
+ + ++ A +L + + D+W
Sbjct: 469 MCRVGELEAAGDLFSSLSSK-GLHPDVW 495
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 6/319 (1%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMI 127
+ P + F+ ++ ++ H++ + L +++ + L + +IV+ + N +
Sbjct: 69 QPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDS---LGIPSDVYTLAIVINSFCHLNRV 125
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D ++ K G + L+ G + E +F + G +PN TY
Sbjct: 126 DFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG-EGFQPNGVTYGT 184
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G+S + +L M +K+ PN + ++ +K+ + + + M G
Sbjct: 185 LIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKG 244
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ V+ YN I LCK + L++ M+ I PN+ + L+ KEG + A
Sbjct: 245 ISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAH 304
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ M G EPD + C E + A KV + KG P+ + +L+ G
Sbjct: 305 DVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGY 364
Query: 368 ASISKVAEANELIGLMKKR 386
I ++ +A L M +R
Sbjct: 365 CKIQRIDKAMYLFEEMCQR 383
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F+ M + G +V + + L+ G + ++ +F E + + PN TYN
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQ-RELVPNIVTYN 393
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G ++ EM P+ + +LL K + +L+ +E
Sbjct: 394 TLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGS 453
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+A + YNI I +C++ E A L + S+G+ P++ TY +I+G +G L A
Sbjct: 454 NLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEA 513
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KLF M GC PD + + T + E +A+++ + + +G+ ST+ +V
Sbjct: 514 TKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEM 573
Query: 367 LA 368
L+
Sbjct: 574 LS 575
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 110/250 (44%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ F++M G + + L+ G N R+ + EPN TYN
Sbjct: 160 IGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQ-KNCEPNVITYN 218
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + + +I +EM K I PN + + ++ G K +++ V ++ M
Sbjct: 219 TIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDS 278
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I V ++ + +LCK A ++D M+ RG++P++ TY L+ G ++ A
Sbjct: 279 KIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEA 338
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+F +M GC P+ + C+ + A+ + + VP+ T +L+ G
Sbjct: 339 DKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHG 398
Query: 367 LASISKVAEA 376
L + ++ +A
Sbjct: 399 LCHVGRLRDA 408
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 1/261 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M+ A + M + G+ V AL+ G L +E ++F + G PN +Y
Sbjct: 299 MVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR-KGCAPNVISY 357
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ +I +C+ + EM ++ + PN + L+ G + D + M
Sbjct: 358 STLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVA 417
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + Y I + LCK + ++A A+L + + P++ +Y +I G + G LE
Sbjct: 418 SGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEA 477
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF+S+++ G PD + + + LC G A K+ R G P T +
Sbjct: 478 AGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITR 537
Query: 366 GLASISKVAEANELIGLMKKR 386
G ++ A +L+ M R
Sbjct: 538 GFLRNNETLSAIQLLQEMLGR 558
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 83/216 (38%), Gaps = 1/216 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ID AM FEEM + L ++ N L+ G + +F E G P
Sbjct: 364 YCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEM-VASGQIP 422
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY ++ C++ ++L + ++ P+ + +++ G + + E G +
Sbjct: 423 DLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLF 482
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V Y I I LC EA L M + G P+ TY + GF +
Sbjct: 483 SSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRN 542
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
A +L M G D+ + L G
Sbjct: 543 NETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/133 (18%), Positives = 56/133 (42%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ ++YN VI C G+ + + + + K + P+ + +++ G + +
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+ + M G + YN+ + + + A LL ML RG + T ++
Sbjct: 515 KLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574
Query: 298 GKEGNLEGAKKLF 310
+G + K++
Sbjct: 575 SDDGLDQSVKQIL 587
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 2/270 (0%)
Query: 127 IDHAMQTFEEMDKYGLR-QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
ID A + EEM K + ++ + L+ G S +E +F E I P++ TY
Sbjct: 259 IDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTY 318
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I FC I+ M++ PN ++ L+ GF KE + E+ +V M+
Sbjct: 319 NALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKS 378
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ Y I C+ R +EA LL M + + T+ ++ G +EG E
Sbjct: 379 LGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEE 438
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A + + G + + + LC+ GE + A ++ + +G +PHF+T L+
Sbjct: 439 AXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLV 498
Query: 366 GLASISKVAEA-NELIGLMKKRFPKSGDMW 394
L KV +A L+GL++ F + W
Sbjct: 499 HLCEAGKVGDAVMALLGLLELGFKPEPNSW 528
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S ++ L + +L EE+ ++ + + + I + +D A++ E
Sbjct: 280 ITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIME 339
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M K G +V +AL+ G EE K +F E K G++P++ Y +I FC +
Sbjct: 340 FMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM-KSLGLKPDTVGYTTLINFFCRA 398
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +L +M R + F ++L G +E ++E+ +L+ + G+ Y
Sbjct: 399 GRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASY 458
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + SLC+ ++A L+ ML RG+ P+ T L+ + G + A +
Sbjct: 459 RIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLE 518
Query: 316 GGCEPDSYCFFMFTYFLCQ 334
G +P+ + + +C+
Sbjct: 519 LGFKPEPNSWALLVELICR 537
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 1/162 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + +A +D AM+ ++M + R N +L G +EE + P G
Sbjct: 392 INFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLP-YEG 450
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ N +Y V+ S C G+ ++ M + + P+ LL + K D
Sbjct: 451 VYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAV 510
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
L + + G N + + ++ +C+ ++ A LLD ++
Sbjct: 511 MALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 552
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 128/304 (42%), Gaps = 3/304 (0%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPD--LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK 139
+ L +AN N ++ P R+NE + + I + +D + F++M +
Sbjct: 8 LGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRE 67
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
+V ++ S E +F+E + G EPN TY +I + C+
Sbjct: 68 DDCYPTVRTYTVIVHALFESGRRMEAINLFSEM-RERGCEPNIHTYTVMINAMCKETKLE 126
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
IL EM K + P+ + L+ G+ KE E ++L +M YN I
Sbjct: 127 EGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELI 186
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
C+ K A ALL ML + P++ TY LIHG K G L+ A +L M G
Sbjct: 187 CGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVV 246
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + + +F LC+ G E A + + KG + +L+ G K+ +AN L
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSL 306
Query: 380 IGLM 383
+ M
Sbjct: 307 LDRM 310
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 1/274 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N ++ A F M K G R++ + L+ G +E IF + + P T
Sbjct: 18 NDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKM-REDDCYPTVRT 76
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y ++ + ESG ++ +EMR + PN + +++ KE K E+ ++L M
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G+ V YN I CK E A+ +LD M S PN TY LI GF ++ N+
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A L + M P + + C+ G ++A ++ G VP T +
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256
Query: 365 TGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
L ++ EAN L +K++ K+ ++ AL
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTAL 290
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 9/336 (2%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
RILD L P P ++ + + A ++L+ + + NER +
Sbjct: 130 RILDEMVEKGLVPSVP----TYNALIDGYCKEGMVEAAQEILDLMHSN-SCNPNERTYNE 184
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
I + + + AM +M + L SV N+L+ G + R+ +
Sbjct: 185 LICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE-N 243
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TY+ I + C+ G + ++ K I+ N + L+ G+ K K +D
Sbjct: 244 GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDA 303
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L M + YN I LCK ++ +EA L++ M+ +G+K + TY LI
Sbjct: 304 NSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVA 363
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG+ + A ++ M + G +PD Y + F + C G + A + +G +P
Sbjct: 364 MLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPD 423
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGD 392
T ++ + + N ++K+ F D
Sbjct: 424 ALTYTLVIDAYGGLGLL---NPAFDVLKRMFDTGCD 456
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 137/360 (38%), Gaps = 70/360 (19%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
+R+L++ + P D+ +S+ + L + + L LK + ++ NE +
Sbjct: 234 YRLLNLMNENGVVP----DQWTYSVFIDTLCKKGRIEEANVLFNSLKEK-GIKANEVIYT 288
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I Y +A +D A N+LL R+ TE
Sbjct: 289 ALIDGYCKAGKMDDA-------------------NSLL------------DRMLTE---- 313
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
PNS TYN +I C+ ++ M +K ++ + +L+ KE ++
Sbjct: 314 -DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDY 372
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++L M G V +Y I + C +EA+ ++ M RG+ P+ TY +I
Sbjct: 373 AHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVID 432
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSY-----------------------------CFF 326
+G G L A + M + GC+P + FF
Sbjct: 433 AYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFF 492
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + ++ETAL++ + G P+ +T L+ GL + ++ A +L M +R
Sbjct: 493 ADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNER 552
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 108/270 (40%), Gaps = 30/270 (11%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ E M + GL+ +V L++ + +++ RI + G +P+ Y
Sbjct: 335 VQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS-GYQPDVYIYT 393
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
I +FC G+ +++ M + + P+A + L++ + VL+ M
Sbjct: 394 AFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDT 453
Query: 247 GIASGVNVYNIRIQ--------------SLC---------------KLKRSEEAKALLDG 277
G + Y+ I+ +LC K+ + E A L +
Sbjct: 454 GCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEK 513
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
ML G PN++TY LI G K G L A+KLF M G P + C+ G
Sbjct: 514 MLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGI 573
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGL 367
Y A+++ A M G +P ++ L GL
Sbjct: 574 YGDAVRLVGAMMEHGHLPLLESLNVLFCGL 603
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 131/327 (40%), Gaps = 45/327 (13%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
++I + + + F+ ++L+++ + +PD+ F +H+ G + M
Sbjct: 356 TYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF-IHAFCTRGNIKEAEDMMSM 414
Query: 134 FEEM----DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
E D +DA L L L+ ++ +KR+F G +P+ TY+ +I
Sbjct: 415 MFERGVMPDALTYTLVIDAYGGLGL---LNPAFDVLKRMFDT-----GCDPSHHTYSCLI 466
Query: 190 K--------------SFCES------GDSSSVYSIL---------AEMRRKSIRPNATDF 220
K + C+S D + V+ ++ +M PN +
Sbjct: 467 KHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTY 526
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ G K + K+ M + G++ +YN + C+L +A L+ M+
Sbjct: 527 AKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMME 586
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G P L++ L G +EG+ E AK +F+++ G D + + L + G +
Sbjct: 587 HGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDG 646
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGL 367
++ A+G H T + L+ GL
Sbjct: 647 CSELLGVMEARGCQIHPQTYRMLIEGL 673
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 142/311 (45%), Gaps = 9/311 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
FS+ +S+L ANHF +LL +K E + YG+ + A++ F +
Sbjct: 52 TFSLMISRLVSANHFRLAEELLCRMKEE-KCNITEDIFLSICRAYGRVHKPLDAVRVFRK 110
Query: 137 MDKYGL---RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M +Y ++S + A+L+G +N ++ F + + GI P+ + N +IK+ C
Sbjct: 111 MKEYECEPSQKSYITVFAILVG----ENQLKLALRFYRYMREMGIPPSVASLNVLIKALC 166
Query: 194 E-SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ SG + I EM + P++ +G L+ G + K + ++ + ME + V
Sbjct: 167 KNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTV 226
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y I LC+ K + A LL+ M S+GIKPN+ TY L+ G K G A +L
Sbjct: 227 VTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDM 286
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + P+ + + LC+ G+ + A+++ +G P +++G I K
Sbjct: 287 MVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICK 346
Query: 373 VAEANELIGLM 383
EA + M
Sbjct: 347 FHEAANFLDEM 357
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + F+EM+ +V +L+ G SK+ + R+ E GI+PN TY+
Sbjct: 207 IGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMAS-KGIKPNVFTYS 265
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+SG SS +L M + PN + L+ G KE K ++ ++L M+
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK-HL-IHGFGKEG--- 301
G+ +Y I C + + EA LD M+ GI PN T+ H+ IH +G
Sbjct: 326 GLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT 385
Query: 302 -NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+ A +L+ SM G D+ F + C G+ A + + G +P T
Sbjct: 386 EHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTW 445
Query: 361 KSLVTGLASISKVAEANELI 380
++V KV E+ EL+
Sbjct: 446 NAVVCAFWDRRKVRESAELV 465
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+ +M+ P+ + + A E++ + + + M + GI V N+ I++LC
Sbjct: 107 VFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALC 166
Query: 264 KLKRSEEAKA-LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K + +A + M +RG P+ TY LI+G + G + AK+LF M C P
Sbjct: 167 KNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTV 226
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + LCQ + ++A+++ +KG P+ T SL+ G + A EL+ +
Sbjct: 227 VTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDM 286
Query: 383 MKKR 386
M R
Sbjct: 287 MVSR 290
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 3/292 (1%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
+LLE + +++ N+R + I + ++ A +M G++ V N +
Sbjct: 148 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 207
Query: 156 CILSKNYEEVKRIFTEFPKVYGI-EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
+ E +R+ + P Y I +PN T +I +C+ G+ L M+ +
Sbjct: 208 YAQNGETERAERLILKMP--YNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVD 265
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PN F L+ G+ V + L +ME+ GI V ++ + + E + +
Sbjct: 266 PNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEI 325
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ M+ GI+P++ Y L G+ + G A+ L SM+ G +P+ F C
Sbjct: 326 FNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCA 385
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ + A ++C G P+ T ++L+ G + +A EL+ M++R
Sbjct: 386 AGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEER 437
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
++ NER I Y + + A++ M + G+ + N+L+ G + + + V
Sbjct: 229 VKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVD 288
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
T + +GI+P+ T++ ++ ++ +G + I +M + I P+ + +L G
Sbjct: 289 EALTLMEE-FGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKG 347
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ + + +L M K G+ V ++ I C + + A L + M G PN
Sbjct: 348 YVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPN 407
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
L TY+ LI G+G+ A++L +M G P+
Sbjct: 408 LKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPE 442
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
N +D A+ EE +G++ V + ++ + E + IF + K GIEP+
Sbjct: 284 TNGVDEALTLMEE---FGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKA-GIEPDIH 339
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
Y+ + K + +G ++L M + ++PN F +++G+ K + ++ + M
Sbjct: 340 AYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKM 399
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G + + Y I + K+ +A+ LL M RG+ P + T + + + G
Sbjct: 400 HEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLF 459
Query: 304 EGAKKLF 310
+ A ++
Sbjct: 460 KEANRIL 466
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 85/194 (43%), Gaps = 9/194 (4%)
Query: 86 SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLR 143
+ N + L+EE +PD+ S ++ + A ++++ + F +M K G+
Sbjct: 282 TDTNGVDEALTLMEEFGIKPDVV------TFSTIMNAWSSAGLMENCEEIFNDMVKAGIE 335
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
+ A + L G + + + + + T K YG++PN + +I +C +G +
Sbjct: 336 PDIHAYSILAKGYVRAGQPRKAEALLTSMSK-YGVQPNVVIFTTIISGWCAAGKMDRAFR 394
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+ +M PN + L+ G+ + + ++L ME+ G+ ++ + +
Sbjct: 395 LCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWR 454
Query: 264 KLKRSEEAKALLDG 277
+ +EA +L+G
Sbjct: 455 AIGLFKEANRILNG 468
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 1/195 (0%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
K++ + G ++ + + +P + L+A ++ +++ + +L +
Sbjct: 27 KLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADN 86
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + N I + + + +EA + M G KP TY LI GFG G +
Sbjct: 87 GMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYES 146
Query: 307 KKLFASM-TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
KL M + +P+ + + C + E A V +A G P T ++
Sbjct: 147 MKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMAR 206
Query: 366 GLASISKVAEANELI 380
A + A LI
Sbjct: 207 AYAQNGETERAERLI 221
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 53/117 (45%)
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ EA+A+ + + G KP L TY L+ ++ + L + + + G +PDS
Sbjct: 37 KPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLN 96
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ G+ + A+K+ + G P ST +L+ G + E+ +L+ +M
Sbjct: 97 AMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMM 153
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 1/231 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + + R+F E + + PN TYN +I C+ G+ +L M
Sbjct: 84 NTLINGLMKERKIGGATRVFNEML-MLNLSPNRVTYNILIDGHCDCGNFEQALRLLDVME 142
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K +RP+ ++G LL+G K K++ +++ + G+ G Y I LCK +
Sbjct: 143 AKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLD 202
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
E+ LLD M G P++ T+ LI+GF K G ++ AK++ M G P+ +
Sbjct: 203 ESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLI 262
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
Y C+ G+ A + G + L++ L +VAEA + +
Sbjct: 263 YNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFM 313
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 1/249 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M+ G ++ N +L C Y+ + + GIE + TYN +I C++
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRM-ESKGIEADVCTYNMLIDDLCKNN 59
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+ Y +L +MR++ I PN + L+ G KE K +V M ++ YN
Sbjct: 60 RSAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYN 119
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I C E+A LLD M ++G++P+ Y L+ G K + AK L +
Sbjct: 120 ILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMS 179
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G + LC+ G + +L++ G P T L+ G K+ A
Sbjct: 180 GMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNA 239
Query: 377 NELIGLMKK 385
E+I M K
Sbjct: 240 KEVICKMFK 248
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 8/320 (2%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQ 123
+L+P + F + K+ Q+N + I + +E PD +++++ Y +
Sbjct: 460 GTLSPNKVMYTSLFD-GLFKVGQSNAASYIYEEMEHKGINPD-----TIAINAVLDGYSR 513
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
++ + F +M L S+ N LL G K+ + + + ++ GI P+
Sbjct: 514 MGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRM-GISPDKL 572
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T + +I C+SG + +L +M + + +L+ + K +L +
Sbjct: 573 TCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIK 632
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
GI VN YN L + E+ LL ML RGI P Y LI+G + G++
Sbjct: 633 NLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDI 692
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+GA +L M G L Q G+ E A+ V + K +P +T +L
Sbjct: 693 QGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTL 752
Query: 364 VTGLASISKVAEANELIGLM 383
+ L +K++EA +L G M
Sbjct: 753 MHMLCKKAKLSEALKLRGKM 772
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 133/346 (38%), Gaps = 38/346 (10%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+D ++ +S L +A + + T DL N I YG A
Sbjct: 288 VDYFICNVLISSLCRAGRVAEAEDFMRHMST-IDLAPNSITFDCIINGYGILGDALKAFS 346
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F+EM K G S +LL G N E K++ + + ++ YN ++
Sbjct: 347 MFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPA-AVDTNIYNTILSET 405
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK-------------------- 232
C+ G S ++ EM + ++ P++ + ++LAG ++ K
Sbjct: 406 CKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPN 465
Query: 233 -------YEDVGKVLQM---------MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
++ + KV Q ME GI N + ++ + E+ + L
Sbjct: 466 KVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFI 525
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M S + P+L TY L+HG+ K+ +L K + MT G PD LC+ G
Sbjct: 526 KMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSG 585
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ K+ + + + + T+ L+T K+ +A +L+ +
Sbjct: 586 MLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNI 631
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 124/289 (42%), Gaps = 15/289 (5%)
Query: 111 ERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
++ HSI+L ++ M+D + ++M LN L+ S +++ + F
Sbjct: 570 DKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITN---SCETDKMGKAF 626
Query: 170 T--EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ GI P+ TYN + + + +L +M + I P +T + L+ G
Sbjct: 627 DLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGM 686
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ + ++ ME G++S + ++ L + + EEA +LD ML + + P +
Sbjct: 687 CRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTV 746
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ L+H K+ L A KL M G + D + + LC G+ A +
Sbjct: 747 ATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEE 806
Query: 348 SMAKGWVPHFSTMKSLVTGLAS---------ISKVAEANELIGLMKKRF 387
+G P+ +T +L+ +++ + + + +L+G++K R
Sbjct: 807 MKERGLWPNTTTYCTLIDAISTNEGEVEERLLVYLEQFEKLVGILKHRM 855
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 121/278 (43%), Gaps = 11/278 (3%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP +R+ ++I + +F +LL+ ++ + LR +E + + + D A
Sbjct: 112 SP-NRVTYNILIDGHCDCGNFEQALRLLDVMEAK-GLRPDEVNYGALLSGLSKLAKFDIA 169
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
E + G+ A A++ G +L ++ + + +F + G P+ T++
Sbjct: 170 KSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKD-----GASPDIITFS 224
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC++G + ++ +M + + PN + L+ K+ + + M +
Sbjct: 225 VLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRT 284
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + N+ I SLC+ R EA+ + M + + PN T+ +I+G+G G+ A
Sbjct: 285 GHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKA 344
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
+F M G P + + LC+GG A K+
Sbjct: 345 FSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKL 382
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 82/209 (39%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN Y + + G S++ I EM K I P+ +L G+ + K E V
Sbjct: 462 LSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVE 521
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+ M+ + + YNI + K K + + M GI P+ T +I G
Sbjct: 522 KLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGL 581
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G L+ K+ M D M C+ + A + G +P
Sbjct: 582 CKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDV 641
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
+T ++ TGL S + E++ L+ M +R
Sbjct: 642 NTYNAIFTGLNRASALRESHLLLHDMLER 670
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 118/263 (44%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q I A+ +E+M++ G++ + ++LLL ++ +E +++TE P G PN
Sbjct: 398 QRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPG-KGFTPNV 456
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY ++K Y++LAEM++ + N + L+ G + +VG++L+
Sbjct: 457 VTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKR 516
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
E G YN I K A A+ M ++GI PN+ TY I G+ K
Sbjct: 517 FETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSC 576
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A K+ + G PD + + CQ G AL+V + G +P+ S S
Sbjct: 577 CDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNS 636
Query: 363 LVTGLASISKVAEANELIGLMKK 385
+TG ++ + EA L M K
Sbjct: 637 FITGYKNLKMMEEALRLYEKMIK 659
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 99/210 (47%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI PN TY I +C++ +L ++R K +RP+ + L+ GF +E
Sbjct: 556 GIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHA 615
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL +M K G+ ++VYN I LK EEA L + M+ GI + TY LI G
Sbjct: 616 LQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDG 675
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+GN+ A KL++ M G PD F T+ LC+ G+ + A K+ P+
Sbjct: 676 FSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPN 735
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
L+ G K+ EA L M +R
Sbjct: 736 VLMYNMLINGYLRNGKLQEAFRLHDEMLER 765
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 121/308 (39%), Gaps = 39/308 (12%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+++++ G + M + A + +M +GL S + N ++ G + K +++ +F E
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM 378
Query: 173 PKVYGIEPNSETYNKVIKSFCE-----------------------------------SGD 197
GI P++ TYN +I C+ +G
Sbjct: 379 AD-SGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGC 436
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ EM K PN + L+ G + ++ +L M++ G++ YN
Sbjct: 437 MDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNT 496
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I LC + R E +L + G P TY +I+GF K G + A ++ M G
Sbjct: 497 LINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P+ + F C+ + ALK+ KG P + SL+ G ++ A
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHAL 616
Query: 378 ELIGLMKK 385
+++ LM K
Sbjct: 617 QVLVLMLK 624
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 128/335 (38%), Gaps = 38/335 (11%)
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMI 127
A E D+ S+A++ L + N +L +++ + + F+ VL M
Sbjct: 205 ASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRM- 263
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A+ +E+ G + SV L+ G L + + IF E + G+ P TY
Sbjct: 264 EEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR-DGLVPTDVTYTV 322
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I+ E G Y + +MR + P+ +F +++ G + ++D + + M G
Sbjct: 323 LIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG 382
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP---------------------- 285
I YNI I LC+ ++ EA L + M G+KP
Sbjct: 383 IPDAFT-YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAV 441
Query: 286 -------------NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
N+ TY L+ G + + A L A M G + Y + L
Sbjct: 442 KLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGL 501
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
C G ++ + +G+VP T S++ G
Sbjct: 502 CVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 123/314 (39%), Gaps = 3/314 (0%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
PLD F + + + ++ +L +E+ ++ ++R +I + + A+
Sbjct: 174 PLDAWMFDVVMRACFKEGMYDDAVRLFDEMPAS-EIEPDQRVCSVAIASLCKLRDANRAL 232
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+M G N+++ + EE I E G + + ++
Sbjct: 233 LVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLAT-GKKMSVVLATTLMHG 291
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C + I E R + P + +L+ G +E E ++ + M G+
Sbjct: 292 YCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPS 351
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
N +N+ I+ L K ++A +L M GI P+ TY LIH + + A L+
Sbjct: 352 TNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWE 410
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M G +P + C G + A+K+ KG+ P+ T +L+ G + +
Sbjct: 411 KMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKA 470
Query: 372 KVAEANELIGLMKK 385
+A L+ MK+
Sbjct: 471 AFDKAYALLAEMKQ 484
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 3/206 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + D A++ ++ GLR + A N+L+ G N ++ K G+ P
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLK-DGLLP 629
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N YN I + + +M ++ I + + L+ GF K+ K+
Sbjct: 630 NISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLY 689
Query: 241 -QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+M+ K I + + LC+ ++A+ LLD M I+PN+ Y LI+G+ +
Sbjct: 690 SEMVAKGNIPDHI-TFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLR 748
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCF 325
G L+ A +L M PD +
Sbjct: 749 NGKLQEAFRLHDEMLERKIMPDDTTY 774
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P++++ ++ S ++ ++LAEMR K +A F +++ +KE Y+D
Sbjct: 137 GVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDA 196
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M I V ++ I SLCKL+ + A +L M G P T+ ++
Sbjct: 197 VRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDV 256
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G +E A + + G + + C E AL + ++ G VP
Sbjct: 257 LVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPT 316
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
T L+ G +A EL M+
Sbjct: 317 DVTYTVLIRGCTEEGMPEKAYELCRQMR 344
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G P+ +Y+ VI +C G+ V ++ EM+ K ++PN + ++ K K
Sbjct: 2 KFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKV 61
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+D +VL+ M GI VY I CKL + A L D M + I P+ Y +
Sbjct: 62 DDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAV 121
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G + G + A K+F M + G EPD + C+ GE E A + + G
Sbjct: 122 ICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI 380
P+ T +L GL + +V ANEL+
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELL 208
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 131/313 (41%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++S ++ + +L++E++ + L+ N + I+L ++ +D A +
Sbjct: 9 DVVSYSTVINGYCLGGELQKVLKLIQEMQMK-GLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM G+ L+ G N + ++F E K I P+ Y VI C
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEK-QRIVPDFIAYTAVICGLC 126
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G + +M + + P+ + L+ G+ K + E + M + G+ V
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y LCKL + + A LL M +G++ N+ TY L++G K GN+ A KL M
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PD+ F C+ GE A ++ R + +G P T L+ G +
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306
Query: 374 AEANELIGLMKKR 386
+ L+ M ++
Sbjct: 307 EDGERLLAWMLEK 319
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 3/239 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETY 185
I A + F+EM+K + A A++ G E ++F + F + G+EP+ TY
Sbjct: 96 IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSR--GVEPDEVTY 153
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I +C+SG+ +S+ +M + + PN + L G K + + ++L M
Sbjct: 154 TTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCG 213
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ + YN + LCK +A L++ M G+ P+ T+ L+ + K G +
Sbjct: 214 KGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVK 273
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +L M + G +P F + C G E ++ + KG +P+ +T SL+
Sbjct: 274 AHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLM 332
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 132/312 (42%), Gaps = 2/312 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A++ + L + ++ ++ +R + +E + I Y ++ ++ A
Sbjct: 114 DFIAYTAVICGLCRCGKMMEADKVFNKMFSR-GVEPDEVTYTTLIDGYCKSGEMEKAFSL 172
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M + GL +V AL G + + E G++ N TYN ++ C
Sbjct: 173 HNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCG-KGLQLNICTYNSLVNGLC 231
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG+ ++ EM + P+ F L+ + K + ++L+ M G+ V
Sbjct: 232 KSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVI 291
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N+ + C E+ + LL ML +GI PN TY L+ + N+ +++ M
Sbjct: 292 TFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM 351
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G PDS + + C+ + A + + KG+ S+ S++ G K+
Sbjct: 352 CARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKI 411
Query: 374 AEANELIGLMKK 385
+EA EL M++
Sbjct: 412 SEARELFEEMRR 423
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 36/254 (14%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + EM GL+ ++ N+L+ G S N + ++ E +V G+ P++ T+
Sbjct: 201 VDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM-EVAGMYPDTITFT 259
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ ++C++G+ + +L EM + ++P F +L+ GF ED ++L M +
Sbjct: 260 TLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEK 319
Query: 247 GI-------------------------------ASGV----NVYNIRIQSLCKLKRSEEA 271
GI A GV N YNI I+ CK + +EA
Sbjct: 320 GIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEA 379
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L M +G +Y +I GF K+ + A++LF M G D+ + +F
Sbjct: 380 WFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDI 439
Query: 332 LCQGGEYETALKVC 345
G ETAL++C
Sbjct: 440 SYGEGNMETALELC 453
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A V Y+ I C ++ L+ M +G+KPNL TY +I K G ++ A
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+++ M N G PD+ + C+ G + A K+ + VP F +++ G
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 367 LASISKVAEANELIGLMKKR 386
L K+ EA+++ M R
Sbjct: 125 LCRCGKMMEADKVFNKMFSR 144
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%)
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
RG P++ +Y +I+G+ G L+ KL M G +P+ Y + LC+ G+ +
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A +V R + +G VP +L+ G + + A +L M+K+
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ 109
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 152/393 (38%), Gaps = 85/393 (21%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPD--LRQNERFHVHSIVLYGQANMIDHAMQTF 134
+F + + L +A + NA L ++ R + ++ +R+ I YG A + ++ F
Sbjct: 105 SFFLMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLF 164
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+ M K G+ SV N+LL + +F E + YG+ P+S T+N +I FC+
Sbjct: 165 QTMKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCK 224
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ ++I EM S P+ + ++ G + K + +L M K A N+
Sbjct: 225 NSMVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNI 284
Query: 255 --YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK------------- 299
Y ++ C + +EA + ML+RG+KPN TY LI G +
Sbjct: 285 VSYTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIG 344
Query: 300 -----------------------EGNLEGAKKLFASMTNGGCEPDSYCF----------- 325
G+L+ A K+F M N PDS +
Sbjct: 345 GDAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRN 404
Query: 326 --------------------------------FMFTYFLCQGGEYETALKVCRASMAKGW 353
MF Y LC G+ + A KV R M +G
Sbjct: 405 EFDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEY-LCANGKAKQAEKVFRQLMKRG- 462
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
S+ ++L+TGL K A EL+ LM +R
Sbjct: 463 AQDPSSYRTLITGLCREGKFKAAYELLVLMLRR 495
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 128/289 (44%), Gaps = 15/289 (5%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ID A+ F EM GL+ + N L+ G + Y+E+K P
Sbjct: 294 YCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSP 353
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ T+N +IK+ C++G + + EM + P++ + +L+ ++++ +
Sbjct: 354 DACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLF 413
Query: 241 QMMEKCGIASGVN-------VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ + + G N YN+ + LC ++++A+ + ++ RG + + +Y+ L
Sbjct: 414 NELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTL 472
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G +EG + A +L M PD + + L + GE A + + +
Sbjct: 473 ITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSY 532
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGL----MKKRFPKSGDMWNAAL 398
+P +T S+ LA + K AN+ GL ++KR ++ D+ A+
Sbjct: 533 LPVATTFHSV---LAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAV 578
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 3/240 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
++ F+EM++ G +V N ++ G C L + E F + G+EPN T+N +
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFG--FLRSMGLKGLEPNLITFNMI 59
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C G +L EM RK P+ + L+ G+ KE + + M + G+
Sbjct: 60 INGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ V Y I S+CK A D M RG+ PN TY +I+GF ++G L+ A +
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ MT G P + C G E A+ + + + KG +P + ++++G A
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFA 239
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 118/284 (41%), Gaps = 36/284 (12%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ EM + G N L+ G N+ + + E + G+ PN TY +I S
Sbjct: 74 EVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVR-NGLSPNVVTYTSLINS 132
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++G+ + +M + + PN + ++ GF ++ ++ +VL M + G
Sbjct: 133 MCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPS 192
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL-- 309
+ YN I C L R EEA LL M+ +G+ P++ +Y +I GF + L+ A ++
Sbjct: 193 IVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKV 252
Query: 310 -------------FASMTNGGCE--------------------PDSYCFFMFTYFLCQGG 336
++S+ G CE PD + + C+ G
Sbjct: 253 EMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEG 312
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ AL + + KG++P T L+ GL ++ EA L+
Sbjct: 313 DLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 4/223 (1%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R F E + G PN TYN +I +C+ + + L M K + PN F +++ G
Sbjct: 4 RFFKEMER-NGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING 62
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
++ + ++ +VL M + G YN + CK +A L M+ G+ PN
Sbjct: 63 LCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPN 122
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ TY LI+ K GNL A + F M G P+ + Q G + A +V
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
G++P T +L+ G + ++ EA IGL++ K
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEA---IGLLQDMVGK 222
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 145/357 (40%), Gaps = 54/357 (15%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ + +A + N + +++ R L NER + I + Q ++D A +
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVR-GLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 136 EMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM + G S+ NAL+ G C+L + E + + K G+ P+ +Y+ +I F
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK--GVLPDVVSYSTIISGFAR 240
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + + + EM KS+ P+A + L+ G ++ + + + Q M +
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE-------------- 300
Y I + CK +A L D M+ +G P+ TY LI+G K+
Sbjct: 301 YTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF 360
Query: 301 ------------------------------------GNLEGAKKLFASMTNGGCEPDSYC 324
G ++ A ++F SM N +P+
Sbjct: 361 YDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAI 420
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + + C+ G A K+ + + +VPH T+ +LV L + E NE+IG
Sbjct: 421 YNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIG 477
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 14/269 (5%)
Query: 131 MQTFEEMDKYGLRQSVDAL-------------NALLLGCILSKNYEEVKRIFTEFPKVYG 177
++ F +M K G V AL N LL G + + + + E +
Sbjct: 114 LECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQ-NS 172
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ +YN VI+ FCE + + EM+ + +G+L+ F K K ++
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L+ M+ G+ + + VY I+ C + KAL D +L RG P TY LI GF
Sbjct: 233 GLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G L+ A ++F M G P+ Y + LC G+ + AL++ + K P+
Sbjct: 293 CKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNV 352
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T ++ L S VA+A E++ LMKKR
Sbjct: 353 VTYNIIINKLCKDSLVADALEIVELMKKR 381
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PNS+TY +I FC++G + +L +MR + P+ D+ LL+ K+ +
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ + M++ V +NI I K + A++LL GM G+ P+L TY LI+ F
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRF 609
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSY-CFFMFTYFLCQG 335
K G L+ A F M + G EPD++ C + Y + QG
Sbjct: 610 LKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQG 648
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 143/323 (44%), Gaps = 15/323 (4%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQ 132
++I + L + F LL E++ PD+ ++ V+ G + ++ A+Q
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVS------YNTVIRGFCEGKELEKALQ 198
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
EM G S+ L+ + +E + E K G+E + Y +I+ F
Sbjct: 199 LANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEM-KHKGLEADLIVYTSLIRGF 257
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G+ ++ E+ + P A + L+ GF K + ++ ++ + M + G+ V
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNV 317
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y I LC + +++EA LL+ ML + +PN+ TY +I+ K+ + A ++
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVEL 377
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV--PHFSTMKSLVTGLASI 370
M PD+ + LC G+ + A K+ + P + +L+ GL
Sbjct: 378 MKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKG 437
Query: 371 SKVAEANELIGLMKKRFPKSGDM 393
+++ +A ++ L+ ++ +GD+
Sbjct: 438 NRLHQALDIYDLLVEKLG-AGDI 459
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 110/292 (37%), Gaps = 40/292 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+ A + FE M + G+R +V L+ G C + K E ++ + K EPN TY
Sbjct: 298 LKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQK--DEEPNVVTY 355
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I C+ + I+ M+++ RP+ + LL G + ++ K+L +M K
Sbjct: 356 NIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLK 415
Query: 246 CGIASGVNV--YNIRIQSLCKLKRSEEA-------------------KALLDGMLSRG-- 282
+ +V +N I LCK R +A LL+ L G
Sbjct: 416 DSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDV 475
Query: 283 --------------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
I PN DTY +I GF K G L AK L M P + +
Sbjct: 476 NKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCL 535
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
LC+ G + A ++ P + ++ G + A L+
Sbjct: 536 LSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLL 587
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 77/194 (39%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ + S + +S +M N LL F + K VL +M K
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G A V YNI ++ LC+ +A +LL M + P++ +Y +I GF + LE
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +L M GC + + C+ G+ + A+ + + KG SL+
Sbjct: 196 ALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIR 255
Query: 366 GLASISKVAEANEL 379
G ++ L
Sbjct: 256 GFCDCGELDRGKAL 269
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 142/322 (44%), Gaps = 10/322 (3%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
+SL P+ L + ++V+ L A + Q LE++ + F+ I Y +A
Sbjct: 447 SSLVPDCSL----YDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFN-SVIAAYSRA 501
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
D+A + ++ M +GL S +++LLG +E + + + G+ N
Sbjct: 502 GFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMID-KGLPVNKVA 560
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+ ++ + + GD++ +S+ EM + I P+A F + G K E+ + M
Sbjct: 561 FTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMS 620
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
K G VYN I LC + EA L M +G+ P++ T +I+GF KEG ++
Sbjct: 621 KKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMK 680
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A FA M + G PD+ + C+ + +A + A GW P +T +
Sbjct: 681 SAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRI 740
Query: 365 TGLASISKVAEA----NELIGL 382
G S K++ A +ELI +
Sbjct: 741 QGFCSSQKISRAVTMLDELIAV 762
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 127/306 (41%), Gaps = 18/306 (5%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMID 128
P++++AF++ + + L E++ R PD F I +A +++
Sbjct: 555 PVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAF----IDGLSKAGLVE 610
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A + F EM K G + N+L+ G C K +E +K + G+ P+ T N
Sbjct: 611 EAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALK--LEREMRQKGLLPDIFTTNI 668
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC+ G S + AEM + P+ + L+ G+ K + L M G
Sbjct: 669 IINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASG 728
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YNIRIQ C ++ A +LD +++ G+ PN TY +++ + L+ A
Sbjct: 729 WDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAM 787
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL-------KVCRASMAKGWVPHFSTM 360
L A + P+ + C+ G E AL K+ RA W+ + +M
Sbjct: 788 VLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKALIWGQKLNKLLRADFIGYWLVYILSM 847
Query: 361 KSLVTG 366
T
Sbjct: 848 DKQATA 853
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 116/264 (43%), Gaps = 7/264 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
QANM+ +EEM G+ N L+ G + +F ++ + + P+
Sbjct: 401 QANML------YEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDW-SLSSLVPDC 453
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y+ + C +G L +M K + P+ F ++A + + ++ K ++
Sbjct: 454 SLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKI 513
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G+ + + + L K R +EA+ LL M+ +G+ N + L+ G+ K G+
Sbjct: 514 MLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGD 573
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
GA L+ M G PD+ F F L + G E A + KG+VP+ S
Sbjct: 574 TAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNS 633
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ GL + K+ EA +L M+++
Sbjct: 634 LIHGLCNCGKLHEALKLEREMRQK 657
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 1/260 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A +D AMQ E+M + G+ SV A N+++ +E+ + ++G+ P+S
Sbjct: 466 AGQLDEAMQFLEDMLEKGMPPSVVAFNSVI-AAYSRAGFEDNAHKAYKIMLMFGLVPSSS 524
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T + ++ + G +L +M K + N F +LL G++K + M
Sbjct: 525 TCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEM 584
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E GI ++ I L K EEA M +G PN Y LIHG G L
Sbjct: 585 EARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKL 644
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A KL M G PD + + C+ G ++A G P T +L
Sbjct: 645 HEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTL 704
Query: 364 VTGLASISKVAEANELIGLM 383
+ G + + A+E + M
Sbjct: 705 IGGYCKVLDMVSADEFLNKM 724
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 17/239 (7%)
Query: 149 LNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEM 208
LN L+ G + S+ E I + +V G+ P+S + + + GD SV+ +L M
Sbjct: 211 LNTLMRGFMNSEMAYESLEILSRMREV-GVRPSSSAISILFRLLLRVGDYGSVWKLLRGM 269
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
R RP +F +++ F ++ +L +M K V YNI I + R+
Sbjct: 270 IRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRT 329
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS--YCFF 326
+A L M+ G KP+L T+ +I F EGN+ A+K+F + G P+ Y
Sbjct: 330 SDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTL 389
Query: 327 MFTYFLCQGGEYETALKVCRASMA------KGWVPHFSTMKSLVTGLASISKVAEANEL 379
M YF A VC+A+M KG P +T LV G K A++ EL
Sbjct: 390 MSGYF--------KARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYEL 440
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ M K G + S+ + ++ N E ++IF +V G+ PN YN ++
Sbjct: 332 ALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEV-GLSPNVAMYNTLM 390
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ ++ D + EMR K I P+ F +L+AG YK K D ++ + +
Sbjct: 391 SGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLV 450
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
++Y++ + LC + +EA L+ ML +G+ P++ + +I + + G + A K
Sbjct: 451 PDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKA 510
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ M G P S L + G + A + + KG + L+ G
Sbjct: 511 YKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFK 570
Query: 370 ISKVAEANELIGLMKKR 386
+ A A+ L M+ R
Sbjct: 571 VGDTAGAHSLWYEMEAR 587
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 118/284 (41%), Gaps = 12/284 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + M +++ M + G+R S A++ L + +Y V ++ + G P
Sbjct: 218 FMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRD-GPRP 276
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ +N +I FC+ G S+L M + P+ + +L+ + + D L
Sbjct: 277 CNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFL 336
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+M K G + ++ I + C EA+ + +G+ G+ PN+ Y L+ G+ K
Sbjct: 337 HLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKA 396
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW-----VP 355
++ A L+ M + G PD F + G Y+ + + + W VP
Sbjct: 397 RDVCQANMLYEEMRDKGIAPDGATFNILV-----AGNYKYGKEADSYELFRDWSLSSLVP 451
Query: 356 HFSTMKSLVTGLASISKVAEANELI-GLMKKRFPKSGDMWNAAL 398
S V GL ++ EA + + +++K P S +N+ +
Sbjct: 452 DCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVI 495
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 3/231 (1%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEV-KRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M + G R N ++L C K Y V + + PK + EP+ YN +I ++
Sbjct: 269 MIRDGPRPCNHNFNIMIL-CFCQKGYLRVAESLLFVMPK-FCCEPDVYAYNILINAYRIR 326
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +S L M + +P+ F ++ F E + K+ + +++ G++ V +Y
Sbjct: 327 GRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMY 386
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + K + +A L + M +GI P+ T+ L+ G K G + +LF +
Sbjct: 387 NTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSL 446
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
PD + + LC G+ + A++ + KG P S++
Sbjct: 447 SSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAA 497
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 131/316 (41%), Gaps = 8/316 (2%)
Query: 45 TIARLKSESNP-FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT 103
+ R K P FR C A P D ++ + L + F + LEE+
Sbjct: 72 VLQRFKHARKPAFRFF---CXAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGE 128
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
+ L E F + +I + +A + F+ M KYG + VD +N LL +K +
Sbjct: 129 K-GLLTMETFSI-AIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGK 186
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E + +F + + P+ +TY ++ +C + + EM + P+ ++
Sbjct: 187 EAQAVFEKLKDRF--TPSLQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVM 244
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L G K K D K+ ++M+ G + V Y I IQ CK K EA D M+ RG
Sbjct: 245 LEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGC 304
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+P+ Y LI GFG++ ++ L M GC PD + + + A++
Sbjct: 305 QPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVR 364
Query: 344 VCRASMAKGWVPHFST 359
+ + + G P T
Sbjct: 365 IYKKMIQSGIKPTIHT 380
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 17/278 (6%)
Query: 82 VSKLSQANHFNAISQLLEELKTR--PDLRQNERFHVHSIVLYGQANMID--HAMQTFEEM 137
+ LS A + E+LK R P L+ ++I+L G + + A + + EM
Sbjct: 176 LDSLSTAKLGKEAQAVFEKLKDRFTPSLQ------TYTILLSGWCRLKNLLEAGRVWNEM 229
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES-- 195
G + A N +L G + K + ++F E K G PN +Y +I+ FC+
Sbjct: 230 IDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLF-EIMKAKGPSPNVRSYTIMIQDFCKQKL 288
Query: 196 -GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G++ + ++ + + +P+A + L+ GF ++ K + V +L+ M + G
Sbjct: 289 MGEAIEYFDVMVD---RGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRT 345
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I+ + ++A + M+ GIKP + TY ++ + N E +++ M
Sbjct: 346 YNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMH 405
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
GC PD + ++ L + A K + KG
Sbjct: 406 PKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKG 443
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 120/314 (38%), Gaps = 21/314 (6%)
Query: 4 LYRLRTNFNLKT-VNYRNLATSSLLSA--GDEAAALTIKEKKRATIA------------R 48
++ L + K V+ N SL +A G EA A+ K K R T + R
Sbjct: 156 IFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLSGWCR 215
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
LK+ R+ + P D +A ++ + L + + +L E +K +
Sbjct: 216 LKNLLEAGRVWNEMIDRGFNP----DIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGP-S 270
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
N R + I + + ++ A++ F+ M G + L+ G K + V +
Sbjct: 271 PNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSL 330
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
E + G P+ TYN +IK I +M + I+P + +++ ++
Sbjct: 331 LKEM-RERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYF 389
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
YE ++ M G N Y + I L + RS EA L+ ML +G+K
Sbjct: 390 VTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKALKL 449
Query: 289 TYKHLIHGFGKEGN 302
Y K GN
Sbjct: 450 DYNKFASDISKTGN 463
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+M +H + + ++ + GL N +++ + R F + G+E ++ T
Sbjct: 162 DMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYF-RLLRESGMEMDTYT 220
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
N ++ +C +GD +L M R N + +L+ G + + +L MM
Sbjct: 221 CNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMML 280
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G + ++ Y + I+ LCK R +A+ LLD M RG+ P++ TY +I G+ K G L+
Sbjct: 281 QDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLK 340
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M GC PD + + + LC GG+ + A ++ ++A+G+ P T +++
Sbjct: 341 DALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNII 399
Query: 365 TGLASISKVAEANELIGLM 383
G K+ +A + +M
Sbjct: 400 NGYCKAEKIDDALRVKSIM 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 6/254 (2%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+S ++YG Q + AM +M + G+ V L+ G ++ R+F E
Sbjct: 499 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF-EM 557
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G+ P+ + YN + + C+SG + YS L +K + + L+ GF K
Sbjct: 558 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV---KKGVVLTKVTYTSLVDGFSKAGN 614
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E +++ M G + + Y++ +Q+LCK K+ EA ++LD M RG+K N+ Y
Sbjct: 615 TEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTI 674
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I KEG + AK +F M + G +P + + +F C+ G E A + G
Sbjct: 675 IISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNG 734
Query: 353 WVPHFSTMKSLVTG 366
P T + G
Sbjct: 735 VAPDVVTYNVFING 748
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 39/259 (15%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A ID A++ M + + A L+ I +E K E G+ P
Sbjct: 402 YCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEI-FANGLSP 460
Query: 181 NSETYNKVIKSFCESGD-----------------------SSSVY------------SIL 205
N Y +I ++C+ G SS +Y +++
Sbjct: 461 NVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALI 520
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
+M+ I P + L+ G K+H++++ ++ +MME+ G+ YN+ +LCK
Sbjct: 521 TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS 580
Query: 266 KRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
R+EEA + L + +G+ TY L+ GF K GN E A L M N GC+ DS+ +
Sbjct: 581 GRAEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTY 637
Query: 326 FMFTYFLCQGGEYETALKV 344
+ LC+ + AL +
Sbjct: 638 SVLLQALCKQKKLNEALSI 656
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 4/275 (1%)
Query: 113 FHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
H +++++ G + I A +EM + G+ SV NA++ G S ++ I T
Sbjct: 288 LHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKT 347
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
+ G P+ TYN +I C G +L + P F ++ G+ K
Sbjct: 348 -LMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKA 405
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
K +D +V +M + Y + I L K R +EAK L+ + + G+ PN+ Y
Sbjct: 406 EKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIY 465
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+I + K G + A ++F + GC P+++ + Y L Q + A+ +
Sbjct: 466 TSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 525
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P T +L+ G + A L +M++
Sbjct: 526 DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 560
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 49/318 (15%)
Query: 115 VHSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALL------------------L 154
++ ++ GQ + D+A + FE M++ GL A N L
Sbjct: 534 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKK 593
Query: 155 GCILSK-NYEEVKRIF-----TEFPKVY-------GIEPNSETYNKVIKSFCESGDSSSV 201
G +L+K Y + F TEF G + +S TY+ ++++ C+ +
Sbjct: 594 GVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEA 653
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
SIL +M + ++ N + ++++ KE K++ + M G Y + I S
Sbjct: 654 LSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISS 713
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
CK+ R EEA L+ M G+ P++ TY I+G G G ++ A M + CEP+
Sbjct: 714 YCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPN 773
Query: 322 SYCFFMF-----------TYFLCQGGEY-----ETALKVCRASMAKGWVPHFSTMKSLVT 365
+ +++ +++ G + +T ++ + G P T S++
Sbjct: 774 YWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIA 833
Query: 366 GLASISKVAEANELIGLM 383
G +++ EA L+ M
Sbjct: 834 GFCKATRLEEACVLLDHM 851
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 32/261 (12%)
Query: 76 MAFSIAVSKL-SQANHFNAISQLLEELKT--RPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+A++I +S++ + H +A S E + + +P F I Y + I+ A
Sbjct: 670 VAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVF----ISSYCKIGRIEEAGH 725
Query: 133 TFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
EM++ G+ V N + GC + + +KR+ EPN TY +
Sbjct: 726 LIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDA-----SCEPNYWTYWLL 780
Query: 189 IKSFCESG-------DSS---------SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+K F + D+S +V+ +L M + + P A + ++AGF K +
Sbjct: 781 LKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 840
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E+ +L M I+ +Y + I+ C +K E+A + + M+ G +P+L++Y +
Sbjct: 841 LEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHY 900
Query: 293 LIHGFGKEGNLEGAKKLFASM 313
LI G EG+ + AK LF +
Sbjct: 901 LITGLCDEGDYDKAKALFCDL 921
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 127/313 (40%), Gaps = 22/313 (7%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
L ++ ++ V S+A + + L+E++ + H +S++L + ++ A
Sbjct: 597 LTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADS---HTYSVLLQALCKQKKLNEA 653
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++M G++ ++ A ++ I ++ K +F E G +P++ TY I
Sbjct: 654 LSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISS-GHKPSAITYTVFIS 712
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF----YKEHKYEDVGKVLQ----- 241
S+C+ G ++ EM R + P+ + + + G Y + + + +++
Sbjct: 713 SYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEP 772
Query: 242 -------MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+++ S N + + + + + LL+ M+ G+ P TY +I
Sbjct: 773 NYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSII 832
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
GF K LE A L M P+ + M C +E A + G+
Sbjct: 833 AGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQ 892
Query: 355 PHFSTMKSLVTGL 367
PH + L+TGL
Sbjct: 893 PHLESYHYLITGL 905
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G+ P + TY+ +I FC++ +L M K I PN + +L+ +E
Sbjct: 819 HGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEK 878
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ M +CG + Y+ I LC ++AKAL +L N +K L
Sbjct: 879 AASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILND 938
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
G K G+++ +L ++M N C DS + M T
Sbjct: 939 GLLKAGHVDICSQLLSAMENRHCRIDSETYSMVT 972
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 77/200 (38%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P T+ +I +C++ + + M + + +G+L++ K+H+ ++
Sbjct: 387 GFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEA 446
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
L + G++ V +Y I + CK+ + A + G +PN TY LI+G
Sbjct: 447 KDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYG 506
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++ L A L M G P + C+ E++ A ++ G P
Sbjct: 507 LIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 566
Query: 357 FSTMKSLVTGLASISKVAEA 376
L L + EA
Sbjct: 567 EQAYNVLTDALCKSGRAEEA 586
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 118/324 (36%), Gaps = 40/324 (12%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAI-SQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
A +AP P +AF V++ H A + LL+ L R ++ V I G
Sbjct: 63 APVAPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGT 122
Query: 124 ANMIDHAMQTFEEMDKYG---LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
A + A+ + + + G L S N L + E + +++++ + G+ P
Sbjct: 123 AEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQ-EGLLP 181
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I ++C+ G + + +R + + LL G+ + +L
Sbjct: 182 DTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLL 241
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
MM G Y I IQ LC+ + EA
Sbjct: 242 MMMPLMGCRRNEYSYTILIQGLCETRCVREALV--------------------------- 274
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L M GC P+ + + + LC+ G A + +G VP T
Sbjct: 275 --------LLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTY 326
Query: 361 KSLVTGLASISKVAEANELIGLMK 384
+++ G ++ +A + LM+
Sbjct: 327 NAMIDGYCKSGRLKDALGIKTLME 350
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 2/178 (1%)
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
+R ++ P + L L + E +GK+ + + G+ YN I + CK
Sbjct: 142 KRLALSPKC--YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSL 199
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
A + G++ + T L+ G+ + G+L A L M GC + Y + +
Sbjct: 200 AIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTIL 259
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ AL + + G P+ T L+ GL ++ +A L+ M +R
Sbjct: 260 IQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRR 317
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 2/295 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +FSI + L + L ++ R +QN + + I +N ++
Sbjct: 456 DTTSFSIVIDGLCNTGKLDLALSLFRDM-VRVGCKQNVLLYNNLIDKLSNSNRLEECYLL 514
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM G R + N++ GC+ + +V+G EP + Y ++K C
Sbjct: 515 LKEMKGSGFRPTQFTHNSIF-GCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLC 573
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ S+ + LAEM R+ P+ + + GF K + ++ + + G V
Sbjct: 574 KRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVV 633
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I CK+KR EA +LD M+++G+ P++ TY LI G+ K G+++ A + M
Sbjct: 634 AYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRM 693
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
EP+ + LC G + A+ + KG P+ + +L+ GL
Sbjct: 694 VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLC 748
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 121/302 (40%), Gaps = 14/302 (4%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQ 144
+ N F + +++ RPD SIV+ G N +D A+ F +M + G +Q
Sbjct: 442 EVNKFFMVKEMV-----RPDTTS------FSIVIDGLCNTGKLDLALSLFRDMVRVGCKQ 490
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
+V N L+ S EE + E K G P T+N + C D + +
Sbjct: 491 NVLLYNNLIDKLSNSNRLEECYLLLKEM-KGSGFRPTQFTHNSIFGCLCRREDVTGALDM 549
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+ EMR P + LL+ K + + L M + G + Y+ I K
Sbjct: 550 VREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVK 609
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+K ++A + + +RG P++ Y LI+GF K + A + M G P
Sbjct: 610 IKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVT 669
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + C+ G+ + A + K P+ T +L+ GL + + +A L M+
Sbjct: 670 YNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMR 729
Query: 385 KR 386
+
Sbjct: 730 GK 731
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 133/359 (37%), Gaps = 57/359 (15%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+D SI V S+ + +L+E ++ +R NE+ I + + + +D A+Q
Sbjct: 266 VDGHVLSILVLTFSKCGEVDKAFELIERMEDL-GIRLNEKTFCVLIHGFVRQSRVDKALQ 324
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F++M K G V +AL+ G K E+ + +E K GI+P+ + +K+I
Sbjct: 325 LFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEM-KELGIDPDIQILSKLIAYC 383
Query: 193 CESGDSSSVYSILAE--------------------------------------------- 207
E D +Y ++ E
Sbjct: 384 SEEVD---IYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDN 440
Query: 208 -------MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
M ++ +RP+ T F +++ G K + + + M + G V +YN I
Sbjct: 441 FEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLID 500
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L R EE LL M G +P T+ + + ++ GA + M G EP
Sbjct: 501 KLSNSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEP 560
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + LC+ A + +G++P + + G I V +A E+
Sbjct: 561 WIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEI 619
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 1/202 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE +F + + PNS ++N ++++ +SG V L EM P+
Sbjct: 180 EEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTS 239
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+L + K++ V + G G +V +I + + K ++A L++ M G
Sbjct: 240 VLQAYCNSRKFDKALSVFNEIYGRGWVDG-HVLSILVLTFSKCGEVDKAFELIERMEDLG 298
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
I+ N T+ LIHGF ++ ++ A +LF M G PD + LC E E AL
Sbjct: 299 IRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKAL 358
Query: 343 KVCRASMAKGWVPHFSTMKSLV 364
+ G P + L+
Sbjct: 359 HLLSEMKELGIDPDIQILSKLI 380
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 18/262 (6%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI-EPNSETY 185
ID +EM G L ++L S+ +++ +F E +YG +
Sbjct: 215 IDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNE---IYGRGWVDGHVL 271
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ ++ +F + G+ + ++ M IR N F +L+ GF ++ + + ++ + M+K
Sbjct: 272 SILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQK 331
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL-- 303
G A V+VY+ I LC K E+A LL M GI P++ LI +E ++
Sbjct: 332 SGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYR 391
Query: 304 -----------EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
E L+ S+ NG S + G Y +V + M K
Sbjct: 392 LIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKE 451
Query: 353 WV-PHFSTMKSLVTGLASISKV 373
V P ++ ++ GL + K+
Sbjct: 452 MVRPDTTSFSIVIDGLCNTGKL 473
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFGKEGNL 303
+C ++ G + IR L EEA L D + + R PN ++ L+ K G++
Sbjct: 158 RCAMSPGALGFFIR--CLGSTGLVEEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSI 215
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ + M + G EPD Y C +++ AL V +GWV + L
Sbjct: 216 DLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDG-HVLSIL 274
Query: 364 VTGLASISKVAEANELIGLMK 384
V + +V +A ELI M+
Sbjct: 275 VLTFSKCGEVDKAFELIERME 295
>gi|357129672|ref|XP_003566485.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 564
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA-GFYKEHKYEDVGK 238
PN YN ++ S E+G + + EM + PN + +L+ ++ +++ K
Sbjct: 111 PNVLCYNTLVNSLAEAGRVAEAHDAFDEMLAAGVAPNVSSLNILVKLHSWRSSRFDLAYK 170
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M + G+ + V Y+ + LC++ R+ EA +L+ ML G P + TY ++ G+
Sbjct: 171 EILRMRELGVEADVGTYSTLVTGLCRVGRTGEAWGVLEWMLEEGCYPMVQTYTPIVQGYC 230
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
EG +E A ++ A+M GC P+ + + LC ++ +V S +K W P
Sbjct: 231 HEGRVEEAMEVMATMERAGCPPNVVTYNVLIRALCDAARFDEVKQVLAESRSKDWTPSTV 290
Query: 359 TMKSLVTGLASISKVAEANELIGLM 383
T + + GL EA E + +M
Sbjct: 291 TYNTFMNGLCKKGMAKEALEQLNVM 315
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 133/307 (43%), Gaps = 24/307 (7%)
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--------YGQANMIDHA 130
++A+ L++A + + L E++T Q + VL +A + A
Sbjct: 76 NVAMKALARAGDIDQVLALFAEIRTSG---QGQGCTTPPNVLCYNTLVNSLAEAGRVAEA 132
Query: 131 MQTFEEMDKYGLRQSVDALNALL-LGCILSKN----YEEVKRIFTEFPKVYGIEPNSETY 185
F+EM G+ +V +LN L+ L S Y+E+ R+ + G+E + TY
Sbjct: 133 HDAFDEMLAAGVAPNVSSLNILVKLHSWRSSRFDLAYKEILRM-----RELGVEADVGTY 187
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ ++ C G + + +L M + P + ++ G+ E + E+ +V+ ME+
Sbjct: 188 STLVTGLCRVGRTGEAWGVLEWMLEEGCYPMVQTYTPIVQGYCHEGRVEEAMEVMATMER 247
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V YN+ I++LC R +E K +L S+ P+ TY ++G K+G +
Sbjct: 248 AGCPPNVVTYNVLIRALCDAARFDEVKQVLAESRSKDWTPSTVTYNTFMNGLCKKGMAKE 307
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW---VPHFSTMKS 362
A + M G +P + + LC A+ + S + W V ++T+ S
Sbjct: 308 ALEQLNVMLGEGLDPSDFTLSILLNCLCHDSRVSDAIDLLERSTSLKWYAGVVGYNTVMS 367
Query: 363 LVTGLAS 369
+ G+ +
Sbjct: 368 RLCGMGN 374
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 4/255 (1%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A E M + G V ++ G EE + + G PN TYN +
Sbjct: 202 EAWGVLEWMLEEGCYPMVQTYTPIVQGYCHEGRVEEAMEVMATMERA-GCPPNVVTYNVL 260
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I++ C++ V +LAE R K P+ + + G K+ ++ + L +M G+
Sbjct: 261 IRALCDAARFDEVKQVLAESRSKDWTPSTVTYNTFMNGLCKKGMAKEALEQLNVMLGEGL 320
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+I + LC R +A LL+ S + Y ++ GN G K
Sbjct: 321 DPSDFTLSILLNCLCHDSRVSDAIDLLERSTSLKWYAGVVGYNTVMSRLCGMGNWMGVLK 380
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M G P++ F +F LC GG+ A + ++G+V + T +L+
Sbjct: 381 LLTDMVKKGITPNTRTFNVFIRSLCFGGKLSIAKSLLH---SQGFVANIVTYNTLIYWFY 437
Query: 369 SISKVAEANELIGLM 383
K++E LI M
Sbjct: 438 YYKKLSEVQHLISDM 452
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 8/280 (2%)
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
RQ ER ++ +A ID + F E+ G Q +L L + E R
Sbjct: 69 RQLERECNVAMKALARAGDIDQVLALFAEIRTSGQGQGCTTPPNVLCYNTLVNSLAEAGR 128
Query: 168 I------FTEFPKVYGIEPNSETYNKVIK-SFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+ F E G+ PN + N ++K S Y + MR + + +
Sbjct: 129 VAEAHDAFDEMLAA-GVAPNVSSLNILVKLHSWRSSRFDLAYKEILRMRELGVEADVGTY 187
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ G + + + VL+ M + G V Y +Q C R EEA ++ M
Sbjct: 188 STLVTGLCRVGRTGEAWGVLEWMLEEGCYPMVQTYTPIVQGYCHEGRVEEAMEVMATMER 247
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G PN+ TY LI + K++ A + P + + F LC+ G +
Sbjct: 248 AGCPPNVVTYNVLIRALCDAARFDEVKQVLAESRSKDWTPSTVTYNTFMNGLCKKGMAKE 307
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
AL+ + +G P T+ L+ L S+V++A +L+
Sbjct: 308 ALEQLNVMLGEGLDPSDFTLSILLNCLCHDSRVSDAIDLL 347
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 1/192 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ AM+ M++ G +V N L+ + ++EVK++ E + P
Sbjct: 229 YCHEGRVEEAMEVMATMERAGCPPNVVTYNVLIRALCDAARFDEVKQVLAE-SRSKDWTP 287
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN + C+ G + L M + + P+ +LL + + D +L
Sbjct: 288 STVTYNTFMNGLCKKGMAKEALEQLNVMLGEGLDPSDFTLSILLNCLCHDSRVSDAIDLL 347
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ +GV YN + LC + LL M+ +GI PN T+ I
Sbjct: 348 ERSTSLKWYAGVVGYNTVMSRLCGMGNWMGVLKLLTDMVKKGITPNTRTFNVFIRSLCFG 407
Query: 301 GNLEGAKKLFAS 312
G L AK L S
Sbjct: 408 GKLSIAKSLLHS 419
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 89/239 (37%), Gaps = 5/239 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P + + +++ + L A F+ + Q+L E +++ ++ L + M A+
Sbjct: 251 PPNVVTYNVLIRALCDAARFDEVKQVLAESRSKDWTPSTVTYNTFMNGLC-KKGMAKEAL 309
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ M GL S D ++LL C+ + E YN V+
Sbjct: 310 EQLNVMLGEGLDPS-DFTLSILLNCLCHDSRVSDAIDLLERSTSLKWYAGVVGYNTVMSR 368
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C G+ V +L +M +K I PN F + + K +L G +
Sbjct: 369 LCGMGNWMGVLKLLTDMVKKGITPNTRTFNVFIRSLCFGGKLSIAKSLLHSQ---GFVAN 425
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN I K+ E + L+ M I P+ TY +I G ++ + A F
Sbjct: 426 IVTYNTLIYWFYYYKKLSEVQHLISDMAVEKIAPDEVTYTVIIDGLCRDEKFDMATSCF 484
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 10/316 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + F+I V L +A +F L+ ++ + L H ++ ++ G + + +D A+
Sbjct: 364 DVVTFTILVDALCKAGNFGEAFAKLDVMRDQGIL---PNLHTYNTLICGLLRVHRLDDAL 420
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT-EFPKVYGIEPNSETYNKVIK 190
+ F+ M+ G++ + A ++ K+ + V + T E K GI PN N +
Sbjct: 421 EIFDNMESLGVKPT--AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 478
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIA 249
S ++G I ++ + P++ + +++ + K + ++ K+L +M+E C
Sbjct: 479 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENC-CE 537
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V V N I +L K R +EA + M +KP + TY L+ G GK G ++ A +L
Sbjct: 538 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 597
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M GC P++ F LC+ E ALK+ M G VP T +++ GL
Sbjct: 598 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 657
Query: 370 ISKVAEANELIGLMKK 385
+V EA MKK
Sbjct: 658 NGQVKEAMCFFHQMKK 673
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 129/314 (41%), Gaps = 4/314 (1%)
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDK-YG 141
S L++A NA+S E L R + V I + N A FE+ K G
Sbjct: 724 SILAEAGIDNAVS-FSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLG 782
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
++ + N L+ G + + E + +F + K G P+ TYN ++ ++ +SG +
Sbjct: 783 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQV-KNTGCIPDVATYNFLLDAYGKSGKIDEL 841
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQ 260
+ I EM PN ++++G K +D + +M + Y I
Sbjct: 842 FEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 901
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
L K R EAK L +GM G +PN Y LI+GFGK G + A LF M G P
Sbjct: 902 GLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 961
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D + + LC G + L R G P ++ GL ++ EA L
Sbjct: 962 DLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLF 1021
Query: 381 GLMKKRFPKSGDMW 394
MKK + D++
Sbjct: 1022 NEMKKSRGITPDLY 1035
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 21/284 (7%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI------ 157
RP L+ V G+ I+ M +EM+ GL+ +V CI
Sbjct: 222 RPSLQTYSSLMVG----LGKRRDIESVMGLLKEMETLGLKPNVYTFTI----CIRVLGRA 273
Query: 158 --LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+++ YE +KR+ E G P+ TY +I + C + + A+M+ +P
Sbjct: 274 GKINEAYEILKRMDDE-----GCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKP 328
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + LL F + V + MEK G V + I + +LCK EA A L
Sbjct: 329 DRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKL 388
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
D M +GI PNL TY LI G + L+ A ++F +M + G +P +Y + +F + +
Sbjct: 389 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKS 448
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
G+ +AL+ KG P+ + + LA + EA ++
Sbjct: 449 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 492
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 5/252 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEE-MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
H+IV+ G +A +D A+ + + M + L+ G S E K++F E
Sbjct: 860 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF-EG 918
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
YG PN YN +I F ++G++ + ++ M ++ +RP+ + +L+ +
Sbjct: 919 MSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 978
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPNLDTYK 291
++ + +++ G+ V YN+ I L K R EEA L + M SRGI P+L TY
Sbjct: 979 VDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYN 1038
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G G +E A K++ + G EP+ + F G+ E A V + +
Sbjct: 1039 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1098
Query: 352 GWVPHFSTMKSL 363
G+ P+ T + L
Sbjct: 1099 GFSPNTGTYEQL 1110
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 135/314 (42%), Gaps = 12/314 (3%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQT 133
F+I + L +A N ++L+ + PD+ + I A +D A +
Sbjct: 262 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT----YTVLIDALCTARKLDCAKEV 317
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F +M K G R D + + L S N + V + ++E K G P+ T+ ++ +
Sbjct: 318 FAKM-KTG-RHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD-GHVPDVVTFTILVDA 374
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++G+ ++ L MR + I PN + L+ G + H+ +D ++ ME G+
Sbjct: 375 LCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPT 434
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
Y + I K S A + M ++GI PN+ ++ K G AK++F
Sbjct: 435 AYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 494
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ + G PDS + M + GE + A+K+ + P + SL+ L
Sbjct: 495 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKAD 554
Query: 372 KVAEANELIGLMKK 385
+V EA ++ MK+
Sbjct: 555 RVDEAWKMFMRMKE 568
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 101/224 (45%), Gaps = 6/224 (2%)
Query: 167 RIFTEFPKVY------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
R TE +VY G P+ +TY+ ++ + D SV +L EM ++PN F
Sbjct: 204 RFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTF 263
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+ + + K + ++L+ M+ G V Y + I +LC ++ + AK + M +
Sbjct: 264 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKT 323
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
KP+ TY L+ F +L+ + ++ M G PD F + LC+ G +
Sbjct: 324 GRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 383
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
A +G +P+ T +L+ GL + ++ +A E+ M+
Sbjct: 384 AFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNME 427
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 1/247 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG++ ID + ++EM + + N ++ G + + N ++ ++ + P
Sbjct: 832 YGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSP 891
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I +SG + M RPN + +L+ GF K + + +
Sbjct: 892 TACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALF 951
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G+ + Y++ + LC + R +E + G+ P++ Y +I+G GK
Sbjct: 952 KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKF 1011
Query: 301 GNLEGAKKLFASMTNG-GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
LE A LF M G PD Y + L G E A K+ G P+ T
Sbjct: 1012 HRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1071
Query: 360 MKSLVTG 366
+L+ G
Sbjct: 1072 FNALIRG 1078
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 7/181 (3%)
Query: 78 FSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
++I ++ +A +A L + + RPDL+ V + + G+ +D + F
Sbjct: 931 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVL-VDCLCMVGR---VDEGLHYF 986
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E+ + GL V N ++ G EE +F E K GI P+ TYN +I +
Sbjct: 987 RELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGI 1046
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+G I E++R + PN F L+ G+ K E V Q M G +
Sbjct: 1047 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1106
Query: 255 Y 255
Y
Sbjct: 1107 Y 1107
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 81/203 (39%), Gaps = 1/203 (0%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
L + + N +L + EE+ +F K I+ ++ TY + K G
Sbjct: 116 LVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRI-IKRDTNTYLTIFKCLSVKGGLRQA 174
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
L +MR NA + L+ K + +V + M G + Y+ +
Sbjct: 175 PFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVG 234
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
L K + E LL M + G+KPN+ T+ I G+ G + A ++ M + GC PD
Sbjct: 235 LGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 294
Query: 322 SYCFFMFTYFLCQGGEYETALKV 344
+ + LC + + A +V
Sbjct: 295 VVTYTVLIDALCTARKLDCAKEV 317
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A Q E M G + N L+ G L E+ ++F GI+ N +YN
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLAD-RGIKLNVFSYN 325
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ + + EMR K ++P+ + L+ + + K+ M+ C
Sbjct: 326 ILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 385
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G ++ Y + + LCK EEA L + KPN++ + L+ G + G LE A
Sbjct: 386 GQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEA 445
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K F ++ G EPD+ + + LC G A+K+ KG +P T ++
Sbjct: 446 WKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQN 505
Query: 367 LASISKVAEANELIGLMKKR 386
L +++ EA +L+ M+ R
Sbjct: 506 LLKENEIHEAIQLLEEMRNR 525
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 141/303 (46%), Gaps = 12/303 (3%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMI 127
SP D F+I + L + Q+LE + + PD+ ++ + L GQ +
Sbjct: 248 SP-DAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTL-MNGLCLVGQ---L 302
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF-PKVYGIEPNSETYN 186
+ A + FE + G++ +V + N L+ G + +E R+F E PK G++P++ TYN
Sbjct: 303 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPK--GLKPSTVTYN 360
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + C+SG + + EM+ + + +LL G K E+ + Q ++K
Sbjct: 361 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ V++I + +C+ + EEA D + G++P+ Y LI+G +G L A
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 480
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KL M GC PDS F + L + E A+++ + + P + S++
Sbjct: 481 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD-EAVTSMLLC 539
Query: 367 LAS 369
LAS
Sbjct: 540 LAS 542
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M A+ F EM G+ V ++L+ G +E F E + GI + TY
Sbjct: 161 MTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM-EGRGISADVYTY 219
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I +G V L M + P+A F +L+ G KE K + ++L++M
Sbjct: 220 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHH 279
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + YN + LC + + E+A L + + RGIK N+ +Y LI+G+ K+ ++
Sbjct: 280 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 339
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +LF M G +P + + LCQ G TA K+ G ST L+
Sbjct: 340 AFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLD 399
Query: 366 GLASISKVAEANELIGLMKK 385
GL + EA +L +KK
Sbjct: 400 GLCKNGHLEEAIDLFQSIKK 419
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 117/264 (44%), Gaps = 6/264 (2%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYG-IEPNS 182
N I A+Q F+EM + GL L+ G C K +K K+ G + +
Sbjct: 91 NGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL----HEKMKGNCKGDV 146
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY +I S C+ G ++ + +EM I P+ + L+ G + + ++ + +
Sbjct: 147 FTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKE 206
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
ME GI++ V YN I L + +E L+ M+ RG P+ T+ LI G KEG
Sbjct: 207 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 266
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+ A+++ M + G EPD + LC G+ E A K+ + +G + +
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ G K+ EA L M+ +
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPK 350
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 79/211 (37%), Gaps = 34/211 (16%)
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR-- 267
++ P+A L+ G + E+ D ++ M + G+ Y I I LCK ++
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 268 --------------------------------SEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ EA + M+ GI P++ Y L+
Sbjct: 130 LAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMD 189
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G + G L+ A + F M G D Y + + L + G ++ + +G+ P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ GL KV EA +++ LM +
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQILELMHHK 280
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 142/311 (45%), Gaps = 9/311 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
FS+ +S+L ANHF +LL +K E + YG+ + A++ F +
Sbjct: 52 TFSLMISRLVSANHFRLAEELLCRMKEE-KCNITEDIFLSICRAYGRVHKPLDAVRVFRK 110
Query: 137 MDKYGL---RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M +Y ++S + A+L+G +N ++ F + + GI P+ + N +IK+ C
Sbjct: 111 MKEYECEPSQKSYITVFAILVG----ENQLKLALRFYRYMREMGIPPSVASLNVLIKALC 166
Query: 194 E-SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
+ SG + I EM + P++ +G L+ G + K + ++ + ME + V
Sbjct: 167 KNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTV 226
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y I LC+ K + A LL+ M S+GIKPN+ TY L+ G K G A +L
Sbjct: 227 VTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDM 286
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + P+ + + LC+ G+ + A+++ +G P +++G I K
Sbjct: 287 MVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICK 346
Query: 373 VAEANELIGLM 383
EA + M
Sbjct: 347 FHEAANFLDEM 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A + F+EM+ +V +L+ G SK+ + R+ E GI+PN TY+
Sbjct: 207 IGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMAS-KGIKPNVFTYS 265
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+SG SS +L M + PN + L+ G KE K ++ ++L M+
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK-HL-IHGFGKEG--- 301
G+ +Y I C + + EA LD M+ GI PN T+ H+ IH +G
Sbjct: 326 GLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT 385
Query: 302 -NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+ A +L+ SM G D+ F + C G+ A + + G +P T
Sbjct: 386 EHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTW 445
Query: 361 KSLVTGLASISKVAEANELI 380
++V KV E+ EL+
Sbjct: 446 NAVVCAFWDRRKVRESAELV 465
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 1/184 (0%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+ +M+ P+ + + A E++ + + + M + GI V N+ I++LC
Sbjct: 107 VFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALC 166
Query: 264 KLKRSEEAKA-LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
K + +A + M +RG P+ TY LI G + G + AK+LF M C P
Sbjct: 167 KNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTV 226
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + LCQ + ++A+++ +KG P+ T SL+ G + A EL+ +
Sbjct: 227 VTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDM 286
Query: 383 MKKR 386
M R
Sbjct: 287 MVSR 290
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 5/249 (2%)
Query: 139 KYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K G R LN L+ G C ++ + + +F P++ G P+ +YN +IK C
Sbjct: 119 KTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPEL-GYTPDVFSYNALIKGLCVEKK 177
Query: 198 SSSVYSILAEMRRK---SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
S +L M + PN + ++ GF+KE + + + M G+ V
Sbjct: 178 SQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVT 237
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I LCK + ++A A+L M +G+ P+ TY +I G+ G LE A +L M+
Sbjct: 238 YNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMS 297
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +PD + + + C+ G A V + + KG P+ + L+ G A+ +
Sbjct: 298 GSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 357
Query: 375 EANELIGLM 383
+ +L+ LM
Sbjct: 358 DVRDLLDLM 366
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 35/238 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN +I C++ +IL M K + P+ + +++ G+ + E+
Sbjct: 230 GLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEA 289
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ M G+ V Y++ IQ CK+ R EA+++ D M+ +G KPN Y L+HG
Sbjct: 290 VRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 349
Query: 297 FGKEGNLEGAKKL-----------------------------------FASMTNGGCEPD 321
+ +G L + L F M G PD
Sbjct: 350 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 409
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + LC+ G E A+ +++G P+ + SL+ GL SI + + EL
Sbjct: 410 VVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 467
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A+ + M G+ N ++ G EE R+ + G++P+
Sbjct: 247 KAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSG-SGLQPDV 305
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ +I+ +C+ G + S+ M RK +PN+T + +LL G+ + DV +L +
Sbjct: 306 VTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDL 365
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI +NI I + K ++A M G++P++ +Y +IH K G
Sbjct: 366 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGR 425
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A F M + G P+ F + LC GE++ ++ + +G P M +
Sbjct: 426 VEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNT 485
Query: 363 LVTGLASISKVAEANELIGLM 383
++ L +V EA + ++
Sbjct: 486 IMDNLCKEGRVVEAQDFFDMV 506
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 1/259 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I Y + +D AM F EM + GLR V + + ++ + E+ F + G
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS-EG 440
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN ++ +I C G+ V + EM + I P+A ++ KE + +
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 500
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
M+ G+ V YN I C + + +E+ LD M+S G++P+ TY L++G+
Sbjct: 501 DFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGY 560
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G +E A L+ M + + + + L Q G A ++ + +G
Sbjct: 561 FKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRI 620
Query: 358 STMKSLVTGLASISKVAEA 376
T +++ GL S V EA
Sbjct: 621 ETYNTVLGGLCENSCVDEA 639
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 38/248 (15%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F+ + G++ V + N L+ G C + K E +K++ + G+ P+S TYN +
Sbjct: 499 AQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQL--DRMVSIGLRPDSWTYNSL 556
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE----------HKYEDVGK 238
+ + ++G ++ EM RK ++ A ++L G ++ K D G
Sbjct: 557 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGT 616
Query: 239 VLQMMEKCGIASG-------------------------VNVYNIRIQSLCKLKRSEEAKA 273
L++ + G V ++I I +L K+ R +EAK+
Sbjct: 617 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKS 676
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L M+ RG P++ TY +I +EG LE + LF SM GC DS+ + L
Sbjct: 677 LFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLL 736
Query: 334 QGGEYETA 341
+ G+ A
Sbjct: 737 EKGDVRRA 744
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++P+ +YN +I +C G L M +RP++ + LL G++K + ED
Sbjct: 510 GVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDA 569
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + M + + NI + L + R A+ L M+ RG + ++TY ++ G
Sbjct: 570 LALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 629
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ ++ A ++F + + E D F + L + G + A + A + +G VP
Sbjct: 630 LCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPD 689
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T ++ + E++ L M+K
Sbjct: 690 VITYSLMIKSHIEEGLLEESDNLFLSMEK 718
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 90/214 (42%), Gaps = 3/214 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI +N +I ++ + G + EMR+ +RP+ + ++ K + ED
Sbjct: 370 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
M G++ + + I LC + ++ + L M++RGI P+ ++
Sbjct: 430 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 489
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG + A+ F + + G +PD + C G+ + ++K ++ G P
Sbjct: 490 LCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPD 549
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
T SL+ G +V +A + L ++ F K
Sbjct: 550 SWTYNSLLNGYFKNGRVEDA---LALYREMFRKD 580
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 8/306 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+I V+ L + + L E++ + PD+ I Y +++ A +
Sbjct: 227 TLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTL----ISAYSSQGLMEEAFEL 282
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M G V N ++ G YE K +F E + G+ P+S TY ++ C
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR-SGLSPDSTTYRSLLMEAC 341
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ GD+ +I ++MR + + P+ F +++ F + + +++ G+
Sbjct: 342 KKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 401
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y I IQ C+ EA L + ML +G ++ TY ++HG K L A KLF M
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
T G PDSY + C+ G + A+++ + K T +L+ G + +
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521
Query: 374 AEANEL 379
A E+
Sbjct: 522 DTAKEI 527
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 116/262 (44%), Gaps = 1/262 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + QA + A + F + G S+DA NAL+ + E RI+ E + G
Sbjct: 162 IRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISR-SG 220
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ N T N ++ + C+ G V + L+E++ K + P+ + L++ + + E+
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+++ M G + GV YN I LCK + E AK + ML G+ P+ TY+ L+
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K+G+ + +F+ M + PD CF + G + AL + G +P
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400
Query: 358 STMKSLVTGLASISKVAEANEL 379
L+ G ++EA L
Sbjct: 401 VIYTILIQGYCRKGMISEAMNL 422
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 5/265 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++ +L+G + M+ A + F EM + GL L L+ G N + +F +
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKM- 496
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K I+ + TYN ++ F + GD + I A+M K I P F +L+ +
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHL 556
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ +V M I V + N I+ C+ + + + L+ M+S G P+ +Y L
Sbjct: 557 SEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616
Query: 294 IHGFGKEGNLEGAKKLFASM--TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
I+GF KE N+ A L M GG PD + + + C+ + + A V R + +
Sbjct: 617 IYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676
Query: 352 GWVPHFSTMKSLVTGLASISKVAEA 376
G P ST SL+ G S + EA
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEA 701
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 3/266 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A + ++E+ + G+ +V LN ++ E+V +E + G+ P+ TYN
Sbjct: 206 VELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE-KGVYPDIVTYN 264
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I ++ G + ++ M K P + ++ G K KYE +V M +
Sbjct: 265 TLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 324
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G++ Y + CK + E + + M SR + P+L + ++ F + GNL+ A
Sbjct: 325 GLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 384
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
F S+ G PD+ + + C+ G A+ + + +G T +++ G
Sbjct: 385 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHG 444
Query: 367 LASISKVAEANELIGLMKKR--FPKS 390
L + EA++L M +R FP S
Sbjct: 445 LCKRKMLGEADKLFNEMTERGLFPDS 470
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 5/204 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY-EEVKRIFTEFPKVYGIE 179
+G+ ID A + + +M + + + ++L+ + SK + E R++ E I+
Sbjct: 515 FGKVGDIDTAKEIWADMVSKEILPTPISF-SILVNALCSKGHLSEAFRVWDEMIS-KSIK 572
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P N +IK +C SG++S L +M + P+ + L+ GF KE +
Sbjct: 573 PTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGL 632
Query: 240 LQMME--KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ ME + G+ V YN + C+ + +EA+A+L M+ RG+ P+ TY LI+GF
Sbjct: 633 VKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGF 692
Query: 298 GKEGNLEGAKKLFASMTNGGCEPD 321
+ NL A + M G PD
Sbjct: 693 VSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N ++ +I++F ++ Y +R K + L+ + E ++
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213
Query: 241 QMMEKCGIASGVNVY--NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
Q + + G+ GVNVY NI + +LCK + E+ L + +G+ P++ TY LI +
Sbjct: 214 QEISRSGV--GVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+G +E A +L +M + G P Y + LC+ G+YE A +V + G P +
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T +SL+ E + M+ R
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSR 359
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 114/270 (42%), Gaps = 6/270 (2%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF-----PKVY 176
G+ I + EM+K +R SV L+ ++ +E ++F
Sbjct: 292 GRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWV 351
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI-RPNATDFGLLLAGFYKEHKYED 235
G+EP+ +N +I C+ G S+L EM+ +I RPN + L+ GF+K ++
Sbjct: 352 GVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDR 411
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ + M + G+ V N + LCK R A + M +G+K N TY LI
Sbjct: 412 AHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALIS 471
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F N+ A + F M + GC PD+ ++ LC G A V G+
Sbjct: 472 AFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL 531
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
S L++G K+ EL+ M++
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEE 561
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 135/327 (41%), Gaps = 3/327 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L + LLEE+K R N + I + +A D A +
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHEL 415
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M++ G++ +V LN L+ G F E K G++ N+ TY +I +FC
Sbjct: 416 FRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM-KGKGLKGNAATYTALISAFC 474
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + EM P+A + L++G + D V+ ++ G + +
Sbjct: 475 GVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRS 534
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN+ I CK K+ E LL M G+KP+ TY LI GK G+ A K+ M
Sbjct: 535 CYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKM 594
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS-LVTGLASISK 372
G P + + C + +K+ + VP + + + L+ L +
Sbjct: 595 IKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNND 654
Query: 373 VAEANELIGLMK-KRFPKSGDMWNAAL 398
V A L+ MK KR + +NA L
Sbjct: 655 VDRAISLMEDMKVKRVRPNTTTYNAIL 681
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 135/332 (40%), Gaps = 17/332 (5%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ F I V+ L +A + Q+ + L+ + N +VL+ +ID + +
Sbjct: 317 VTFGILVNHLCKARRIDEALQVFDRLRGKGG--SNWVGVEPDVVLFN--TLIDGLCKVGK 372
Query: 136 EMDKYGL----------RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
E D L R + N L+ G + N++ +F + + G++PN T
Sbjct: 373 EEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE-EGVQPNVITL 431
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ C+ G EM+ K ++ NA + L++ F + + + M
Sbjct: 432 NTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLS 491
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + VY I LC R +A ++ + G + Y LI GF K+ LE
Sbjct: 492 SGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLER 551
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
+L M G +PD+ + +L + G++ TA KV + +G P T +++
Sbjct: 552 VYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIH 611
Query: 366 GLASISKVAEANELIGLM--KKRFPKSGDMWN 395
S V E ++ G M + P + ++N
Sbjct: 612 AYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYN 643
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 42/302 (13%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + V L + + + E+K + L+ N + I + N I+ AMQ FE
Sbjct: 429 ITLNTLVDGLCKHGRVHRAVEFFNEMKGK-GLKGNAATYTALISAFCGVNNINRAMQCFE 487
Query: 136 EMDKYGLRQSVDAL-------------------------------------NALLLGCIL 158
EM G S DA+ N L+ G
Sbjct: 488 EMLSSGC--SPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCK 545
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
K E V + TE + G++P++ TYN +I ++GD ++ ++ +M ++ +RP+
Sbjct: 546 KKKLERVYELLTEMEET-GVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVV 604
Query: 219 DFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+G ++ + + ++ K+ +M + +YNI I +LC+ + A +L++
Sbjct: 605 TYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMED 664
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M + ++PN TY ++ G + L A +L M C PD + T +L GE
Sbjct: 665 MKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGE 724
Query: 338 YE 339
E
Sbjct: 725 IE 726
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLL---EELKTRPDLRQNERFHVHSIVLY-GQANMID 128
LDR +++ +S + + +LL EE +PD ++++ Y G+
Sbjct: 531 LDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPD-----TITYNTLISYLGKTGDFA 585
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + E+M K GLR SV A++ KN +E +IF E + PN+ YN +
Sbjct: 586 TASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNIL 645
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
I + C + D S++ +M+ K +RPN T + +L G
Sbjct: 646 IDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKG 683
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 90/217 (41%), Gaps = 7/217 (3%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +++ C + + +L + R +A LL + + +
Sbjct: 241 GVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRM 300
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR------GIKPNLDTY 290
++L MEK I V + I + LCK +R +EA + D + + G++P++ +
Sbjct: 301 NELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLF 360
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGC-EPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
LI G K G E L M G P++ + + G ++ A ++ R
Sbjct: 361 NTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMN 420
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+G P+ T+ +LV GL +V A E MK +
Sbjct: 421 EEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGK 457
>gi|242043154|ref|XP_002459448.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
gi|241922825|gb|EER95969.1| hypothetical protein SORBIDRAFT_02g004810 [Sorghum bicolor]
Length = 316
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN TY+ +I C+SG + I M + +PNA + LL G+ E D+
Sbjct: 5 GQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDM 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
V +M + G+ +V+NI I + CK R +EA + M G P++ TY +I G
Sbjct: 65 NNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDG 124
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G L+ A F M + G P+ F + G++E A ++ M +G P+
Sbjct: 125 LCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPN 184
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+T S++ L KV EA +L LM P++G
Sbjct: 185 VNTFNSMIDRLFKEGKVTEARKLFDLM----PRAG 215
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 2/234 (0%)
Query: 151 ALLLGCILSKNYE-EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
++L+ C+ E + IF + G +PN+ TY ++ + G+ + ++ M
Sbjct: 14 SMLINCLCKSGLRAEAREIFNSMIQ-SGQKPNAATYRSLLHGYATEGNLVDMNNVKDLMV 72
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ +RP+ F + + + K + ++ M++ G + Y I LCK+ R +
Sbjct: 73 QNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKIGRLD 132
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A + M+ G+ PN+ T+ LIHGF G E A++LF M + G P+ F
Sbjct: 133 DAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNSMI 192
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
L + G+ A K+ G P+ + +++ G +V E +L+ M
Sbjct: 193 DRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 246
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 7/245 (2%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F M + G + + +LL G N ++ + + G+ P+ +N
Sbjct: 28 EAREIFNSMIQSGQKPNAATYRSLLHGYATEGNLVDMNNV-KDLMVQNGMRPDRHVFNIE 86
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED-VGKVLQMMEKCG 247
I ++C+ G +M++ P+ + ++ G K + +D + + QM++ G
Sbjct: 87 IYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD-G 145
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
++ + + I + E+A+ L M+ RGI PN++T+ +I KEG + A+
Sbjct: 146 LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPNVNTFNSMIDRLFKEGKVTEAR 205
Query: 308 KLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
KLF M G +P+ SY + YF+ GE +K+ + G P+ + +L+
Sbjct: 206 KLFDLMPRAGAKPNVVSYNTMIHGYFI--AGEVGEVMKLLDDMLLIGLKPNAVNLNTLLD 263
Query: 366 GLASI 370
G+ SI
Sbjct: 264 GMLSI 268
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G V Y++ I LCK EA+ + + M+ G KPN TY+ L+HG+ EGN
Sbjct: 1 MSRDGQGPNVVTYSMLINCLCKSGLRAEAREIFNSMIQSGQKPNAATYRSLLHGYATEGN 60
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L + M G PD + F + Y C+ G + A G++P T +
Sbjct: 61 LVDMNNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIVTYTT 120
Query: 363 LVTGLASISKVAEA 376
++ GL I ++ +A
Sbjct: 121 VIDGLCKIGRLDDA 134
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 28/254 (11%)
Query: 74 DRMAFSIAVSKLSQANHFNAIS---QLLEELKTRPDLRQNERFHVHSIVLYGQANM--ID 128
DR F+I + + + S +++L PD+ ++ V+ G + +D
Sbjct: 79 DRHVFNIEIYAYCKCGRLDEASLTFNKMQQLGFMPDIV------TYTTVIDGLCKIGRLD 132
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM F +M GL ++ L+ G + +E+ + +F E GI PN T+N +
Sbjct: 133 DAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMD-RGIPPNVNTFNSM 191
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I + G + + M R +PN + ++ G++ + +V K+L M G+
Sbjct: 192 IDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 251
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
N N+ LLDGMLS G+KPN+DT K LI ++ +E
Sbjct: 252 KP--NAVNL--------------NTLLDGMLSIGLKPNVDTCKTLIDSCCEDDRIEDILT 295
Query: 309 LFASMTNGGCEPDS 322
LF M + + D+
Sbjct: 296 LFREMLSKADKTDT 309
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 4/201 (1%)
Query: 123 QANMIDHAMQTFEE-MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
+ N++D M ++ M + G+R N + +E F + ++ G P+
Sbjct: 58 EGNLVD--MNNVKDLMVQNGMRPDRHVFNIEIYAYCKCGRLDEASLTFNKMQQL-GFMPD 114
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TY VI C+ G S +M + PN F L+ GF K+E ++
Sbjct: 115 IVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFY 174
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M GI VN +N I L K + EA+ L D M G KPN+ +Y +IHG+ G
Sbjct: 175 EMMDRGIPPNVNTFNSMIDRLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAG 234
Query: 302 NLEGAKKLFASMTNGGCEPDS 322
+ KL M G +P++
Sbjct: 235 EVGEVMKLLDDMLLIGLKPNA 255
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 8/269 (2%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEE+ + G++ A NALL G + + ++ + + +E K G+ P+ TY+ +I ++
Sbjct: 327 FEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK-RGVSPDEHTYSLLIDAYV 385
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G S +L EM ++PN+ F LLAGF +++ +VL+ M+ G+
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN+ I + K + A D MLS GI+P+ T+ LI K G A+++F +M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYE--TALKVCRASM-AKGWVPHFSTMKSLVTGLASI 370
GC P C + + G+ E +K M ++G +P+ T +LV
Sbjct: 506 ERRGCLP---CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
Query: 371 SKVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ +A E + MK S M+NA +
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 3/274 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +S+++ Y A + A +EM+ ++ + + LL G +++ ++ E
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G++P+ + YN VI +F + + M + I P+ + L+ K
Sbjct: 435 M-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++ ++ + ME+ G YNI I S +R ++ K LL M S+GI PN+ T+
Sbjct: 494 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ +GK G A + M + G +P S + Q G E A+ R +
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 613
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P + SL+ + AEA ++ MK+
Sbjct: 614 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 647
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 8/252 (3%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
FS ++ + Q+L+E+K+ +PD +F+ I +G+ N +DHAM T
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD----RQFYNVVIDTFGKFNCLDHAMTT 466
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M G+ N L+ C V E + G P + TYN +I S+
Sbjct: 467 FDRMLSEGIEPDRVTWNTLI-DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 525
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +L +M+ + I PN L+ + K ++ D + L+ M+ G+
Sbjct: 526 DQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 585
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I + + SE+A M S G+KP+L LI+ FG++ A + M
Sbjct: 586 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 314 TNGGCEPDSYCF 325
G +PD +
Sbjct: 646 KENGVKPDVVTY 657
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 41/324 (12%)
Query: 102 KTRPDLRQNERFHVHSIVLYG--QANMIDHAM--QTFEEMDKYGLRQSVDALNALLLGCI 157
K R D Q++ F +S+V+ ++N ID M + ++E+++ L V +N +++G
Sbjct: 222 KMRQDGYQSD-FVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFA 280
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
S + + ++ + G+ + T +I + +SG + ++ E+R+ I+P
Sbjct: 281 KSGDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 339
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ LL G+ K +D ++ MEK G++ + Y++ I + R E A+ +L
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 399
Query: 278 M-----------LSR------------------------GIKPNLDTYKHLIHGFGKEGN 302
M SR G+KP+ Y +I FGK
Sbjct: 400 MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC 459
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+ A F M + G EPD + C+ G + A ++ A +G +P +T
Sbjct: 460 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 519
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
++ + + L+G MK +
Sbjct: 520 MINSYGDQERWDDMKRLLGKMKSQ 543
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 1/252 (0%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +M ++G + ++ G ++E I + P YG++PN YN V+K
Sbjct: 244 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPS-YGLKPNVVCYNTVLKG 302
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C + +LAEM ++ + F +L+ F + + V ++L+ M + G
Sbjct: 303 LCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 362
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y I CK +EA LL M + G KPN +Y ++ G + A++L +
Sbjct: 363 VITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS 422
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M GC P+ F F+C+ G E A+++ + + G P + +++ GL
Sbjct: 423 HMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 482
Query: 372 KVAEANELIGLM 383
K EA EL+ +M
Sbjct: 483 KTEEALELLNVM 494
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 136/304 (44%), Gaps = 10/304 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLL-------EELKTRPDLRQNERFHVHSIVLYGQANM 126
D ++++ + L A ++ + +L+ E L P+ +++ ++ G
Sbjct: 212 DIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKD 271
Query: 127 IDH--AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
H A M YGL+ +V N +L G ++ +EE + + E + + T
Sbjct: 272 GHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQ-EDCPLDDVT 330
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N ++ FC++G V +L +M P+ + ++ GF KE ++ +L+ M
Sbjct: 331 FNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMS 390
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
CG Y I ++ LC+ +R +A+ L+ M+ +G PN T+ LI+ K+G E
Sbjct: 391 ACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAE 450
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +L M GC PD + L + G+ E AL++ + KG P+ S+
Sbjct: 451 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMA 510
Query: 365 TGLA 368
+ L+
Sbjct: 511 SALS 514
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 135/311 (43%), Gaps = 2/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L A + LL E+ + F++ + + Q ++D ++ E
Sbjct: 294 VCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNIL-VDFFCQNGLVDRVIELLE 352
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M ++G V ++ G +E + G +PN+ +Y V+K C +
Sbjct: 353 QMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNM-SACGCKPNTISYTIVLKGLCRA 411
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+++ M ++ PN F L+ K+ E ++L+ M G + + Y
Sbjct: 412 ERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISY 471
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I L K ++EEA LL+ M+++GI PN Y + +EG + ++F S+ +
Sbjct: 472 STVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQD 531
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
D+ + LC+ E + A+ ++ G +P+ ST L+ GLAS V E
Sbjct: 532 ATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVRE 591
Query: 376 ANELIGLMKKR 386
A +L+ + R
Sbjct: 592 AQDLLSELCSR 602
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 120/303 (39%), Gaps = 61/303 (20%)
Query: 141 GLRQSVDALNALLL-GCILSKN--------------YEEVKRIFTEFPKVYGIEPNSETY 185
G R +V AL L GC L +E + + P +G EP+ +Y
Sbjct: 158 GFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPS-FGCEPDIVSY 216
Query: 186 NKVIKSFCESGDSSSVYSILAEMRR----------KSIRPNATDFGLLLAGFYKEHKYED 235
N V+K C + V ++ EM R P+ + ++ G K+ +E
Sbjct: 217 NAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 276
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK----------------------- 272
+L M G+ V YN ++ LC +R EEA+
Sbjct: 277 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 336
Query: 273 ------------ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LL+ ML G P++ TY +I+GF KEG ++ A L +M+ GC+P
Sbjct: 337 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 396
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
++ + + LC+ + A ++ + +G +P+ T +L+ + +A EL+
Sbjct: 397 NTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELL 456
Query: 381 GLM 383
M
Sbjct: 457 KQM 459
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 104/257 (40%), Gaps = 14/257 (5%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
+D G V A NA++ G + +R+ P + PN+ TY +++S C G
Sbjct: 67 LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP----VPPNAYTYFPIVRSLCARG 122
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ ++L EM + ++L + + + LQ++ G N
Sbjct: 123 LIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCN 182
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL------- 309
+ + ++C+ +E LL + S G +P++ +Y ++ G + ++L
Sbjct: 183 LVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRV 242
Query: 310 ---FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M GC PD + +C+ G +E A + + G P+ +++ G
Sbjct: 243 HEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKG 302
Query: 367 LASISKVAEANELIGLM 383
L S + EA +L+ M
Sbjct: 303 LCSAERWEEAEDLLAEM 319
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 5/312 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + + L + + LL E++ R L N + + I + A
Sbjct: 152 VTYGAIIHWLGRKGDLTKVESLLGEMRAR-GLSPNVQIYNTVINALCKCRSASQASDMLN 210
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M K V N ++ G + E ++ E + G+EPN +Y +I FC
Sbjct: 211 QMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIR-RGLEPNQLSYTPLIHGFCVR 269
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G++ +L EM + P+ G L+ G + D V + M + + N+Y
Sbjct: 270 GEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIY 329
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N+ I LCK + AK LL+ ML + ++P+ Y LI GF + L A+K+F M
Sbjct: 330 NVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEE 389
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVA 374
C PD + + C+ G + A+ C +SM K G +P T +LV G A ++
Sbjct: 390 KAC-PDIVAYNVMIKGYCKFGMMKEAV-TCMSSMRKAGCIPDEFTYTTLVDGYAKKGDIS 447
Query: 375 EANELIGLMKKR 386
+ L+ M KR
Sbjct: 448 ASLRLLCDMMKR 459
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P + YN +I +C GD +L EM K I P +G ++ ++ V
Sbjct: 111 GCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKV 170
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L M G++ V +YN I +LCK + + +A +L+ M+ P++ T+ +I G
Sbjct: 171 ESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAG 230
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F +EG++ A KL G EP+ + + C GE A + M +G P
Sbjct: 231 FCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPD 290
Query: 357 FSTMKSLVTGLASISKVAEA 376
T+ +L+ GL +V +A
Sbjct: 291 MITLGALIHGLVVSGQVNDA 310
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 9/306 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH---VHSIVLYGQANMIDHA 130
D + F+ ++ + +LL E R L N+ + +H + G+A + A
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLLRE-AIRRGLEPNQLSYTPLIHGFCVRGEAMV---A 275
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
EM G + L AL+ G ++S + I E + P++ YN +I
Sbjct: 276 SDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDA-LIVREKMAERQVMPDANIYNVLIS 334
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ S+ ++L EM + ++P+ + L+ GF + K D K+ + ME+
Sbjct: 335 GLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEE-KACP 393
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN+ I+ CK +EA + M G P+ TY L+ G+ K+G++ + +L
Sbjct: 394 DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLL 453
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M C+P+ + + C G+ +A + ++G P+ L+ L
Sbjct: 454 CDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKK 513
Query: 371 SKVAEA 376
KV +A
Sbjct: 514 DKVIQA 519
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 84/205 (40%), Gaps = 2/205 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P TY +I GD + V S+L EMR + + PN + ++ K
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L M K V +N I C+ EA LL + RG++PN +Y LIHG
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-P 355
F G A L M G PD + L G+ AL V R MA+ V P
Sbjct: 266 FCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIV-REKMAERQVMP 324
Query: 356 HFSTMKSLVTGLASISKVAEANELI 380
+ L++GL ++ A L+
Sbjct: 325 DANIYNVLISGLCKKRMLSAAKNLL 349
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 137/349 (39%), Gaps = 42/349 (12%)
Query: 87 QANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQ 144
Q N + + + E + PD +++++++ G + M+ A EEM + ++
Sbjct: 306 QVNDALIVREKMAERQVMPDA------NIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQP 359
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
L+ G + S + ++IF EF + P+ YN +IK +C+ G +
Sbjct: 360 DKFIYTTLIDGFVRSDKLSDARKIF-EFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTC 417
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
++ MR+ P+ + L+ G+ K+ ++L M K + Y I C
Sbjct: 418 MSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCN 477
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP-DSY 323
+ + A+ L M S G+ PN+ Y LI K+ + A F M C P D+
Sbjct: 478 IGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDAT 537
Query: 324 CFFMFTYFL-CQGG-------------EYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
++ + C+ G E L V R ++ G P S +++ L
Sbjct: 538 VHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCR 597
Query: 370 ISKVAEANELIGLMKKR---------------FPKSGD--MWNAALPRQ 401
+ + +A +L M + F +G+ W +ALP +
Sbjct: 598 HNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNE 646
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 6/202 (2%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK---VLQMME 244
+++ C G ++ + P A + +L+ G+ + D+G+ +L ME
Sbjct: 87 MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRG---DIGRGLLLLGEME 143
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
GI V Y I L + + ++LL M +RG+ PN+ Y +I+ K +
Sbjct: 144 TKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSAS 203
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A + M PD F C+ G+ ALK+ R ++ +G P+ + L+
Sbjct: 204 QASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLI 263
Query: 365 TGLASISKVAEANELIGLMKKR 386
G + A++L+ M R
Sbjct: 264 HGFCVRGEAMVASDLLVEMMGR 285
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 65/159 (40%)
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+++ G E + E+ +++ G G YN+ I C+ LL M ++
Sbjct: 86 VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK 145
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI P + TY +IH G++G+L + L M G P+ + LC+ A
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + + P T +++ G V EA +L+
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLL 244
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 12/315 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--ID 128
D A++ +S + N A +Q+L +K R PD+ ++I++ N +
Sbjct: 146 DVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIV------TYNIMIGSLCNRRKLG 199
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ +++ +V L+ I+ E ++ E G+ P+ TYN +
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEM-LARGLLPDMYTYNAI 258
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I+ C+ G ++ + K P+ + +LL F + K+++ K++ M G
Sbjct: 259 IRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 318
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y+I I SLC+ R +EA ++L M+ + + P+ +Y LI KEG L+ A
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ M + GC PD + LC+ G AL++ G P+ S+ ++++ L
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 438
Query: 369 SISKVAEANELIGLM 383
S + A ++ M
Sbjct: 439 SCGDRSRALGMVPAM 453
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 2/264 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A + ++ E + G V L+ G KN E+ R+ EP+
Sbjct: 90 KAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES--HTEPDV 147
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
YN VI FC+ + +L M+ + P+ + +++ K VL
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ 207
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ V Y I I++ EA LL+ ML+RG+ P++ TY +I G KEG
Sbjct: 208 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 267
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A +L S+T+ GCEPD + + G+++ K+ ++G P+ T
Sbjct: 268 VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSI 327
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L++ L ++ EA ++ +M ++
Sbjct: 328 LISSLCRFGRIDEAISVLKVMIEK 351
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 137/320 (42%), Gaps = 17/320 (5%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHA 130
+ ++I + N +LLEE+ R PD+ + ++ ++ G + M++ A
Sbjct: 218 ITYTILIEATIVEGGINEAMKLLEEMLARGLLPDM------YTYNAIIRGMCKEGMVERA 271
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVI 189
+ + G V + N LL + ++E +++ E F + G EPN TY+ +I
Sbjct: 272 AELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR--GCEPNKVTYSILI 329
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S C G S+L M K + P+ + L++ KE + + ++ M G
Sbjct: 330 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCL 389
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN + +LCK + +A + + + G PN+ +Y +I G+ A +
Sbjct: 390 PDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGM 449
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+M + G +PD + LC+ G E A+ + G+ P + ++ GL
Sbjct: 450 VPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCK 509
Query: 370 ISKVAEANELIGLMKKRFPK 389
+ ++ +A IG+ + K
Sbjct: 510 VRRIDDA---IGMFAEMIEK 526
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 108/244 (44%), Gaps = 10/244 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT--RPDLRQNERFHVHSIVLYGQANMIDHAM 131
+++ +SI +S L + F I + + LK +L + + I + +D A+
Sbjct: 321 NKVTYSILISSLCR---FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAI 377
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ M G + N +L + N + IF + + G PN +YN +I +
Sbjct: 378 GIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL-RGMGCPPNVSSYNTMISA 436
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
GD S ++ M K I P+ + L++ ++ E+ +L ME+ G
Sbjct: 437 LWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 496
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG----NLEGAK 307
V YNI + LCK++R ++A + M+ +G +PN TY LI G G G +E A
Sbjct: 497 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELAN 556
Query: 308 KLFA 311
LF+
Sbjct: 557 SLFS 560
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 128/294 (43%), Gaps = 12/294 (4%)
Query: 95 SQLLEELK--TRPDLRQNERFHVHSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNA 151
S+++E L+ T PD+ F ++++ + + N I+ A Q M G + N
Sbjct: 133 SRVMEILESHTEPDV-----FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYN- 186
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
+++G + ++ + + + P TY +I++ G + +L EM +
Sbjct: 187 IMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 246
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ P+ + ++ G KE E +++ + G V YNI +++ + +E
Sbjct: 247 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEG 306
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ L+ M SRG +PN TY LI + G ++ A + M PD+Y +
Sbjct: 307 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 366
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
LC+ G + A+ + ++ G +P ++ LA++ K AN+ + + K
Sbjct: 367 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTI---LAALCKNGNANQALEIFNK 417
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 1/194 (0%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
K++ C++G + L + K P+ L+ GF+ E +V++++E
Sbjct: 83 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILES- 141
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I CK+ + E A +L+ M +RG P++ TY +I L A
Sbjct: 142 HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 201
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + C P + + G A+K+ +A+G +P T +++ G
Sbjct: 202 LTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 261
Query: 367 LASISKVAEANELI 380
+ V A ELI
Sbjct: 262 MCKEGMVERAAELI 275
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 28/190 (14%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNAL---LLGCILSKNYEEVKRIFTEFPKVY-- 176
G AN A++ F ++ G +V + N + L C + R P +
Sbjct: 406 GNAN---QALEIFNKLRGMGCPPNVSSYNTMISALWSC------GDRSRALGMVPAMISK 456
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED- 235
GI+P+ TYN +I C G +L +M + RP + ++L G K + +D
Sbjct: 457 GIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDA 516
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK----------- 284
+G +M+EK G Y + I+ + EA L + + SR +
Sbjct: 517 IGMFAEMIEK-GCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQDSFKRLNKT 575
Query: 285 -PNLDTYKHL 293
P LD YK L
Sbjct: 576 FPMLDVYKEL 585
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A T+ EM G+ V ++++ ++ ++ + K G+ P+ TYN
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYNS 276
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ +C SG L +MR + PN + L+ K + + K+ M K G
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + Y +Q E ALLD M+ GI+P+ + LI + K+ ++ A
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+F+ M G P+ C+ LC+ G + A+ + +G P+ SL+ GL
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Query: 368 ASISKVAEANELIGLMKKR 386
+ K +A ELI M R
Sbjct: 457 CTCDKWDKAEELILEMLDR 475
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 5/277 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H ++I++ +A +D + K G R LL G K + I
Sbjct: 93 HTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL---AEMRRKSIRPNATDFGLLLAGFY 228
G P+ +YN ++K C+ S +L A+ R P+ + +L GF+
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
KE + M GI V Y+ I +LCK + ++A +L+ M+ G+ P+
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY ++HG+ G + A M + G EP+ + +LC+ G A K+ +
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+G P +T ++L+ G A+ + E + L+ LM +
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 369
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV--YGIEPNSETYN 186
HA+ + M + G++ N L+ C +K E+V + F K+ +G+ PN Y
Sbjct: 361 HAL--LDLMVRNGIQPDHHVFNILI--CAYAKQ-EKVDQAMLVFSKMRQHGLNPNVVCYG 415
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-VLQMMEK 245
VI C+SG +M + + PN + L+ G K++ + +L+M+++
Sbjct: 416 TVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR 475
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
GI +N I S CK R E++ L D M+ G+KP++ TY LI G G ++
Sbjct: 476 -GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDE 534
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A KL ASM + G +PD + C+ + AL + + ++ G P+ T ++
Sbjct: 535 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594
Query: 366 GLASISKVAEANEL 379
GL + A A EL
Sbjct: 595 GLFHTRRTAAAKEL 608
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D AM+ M K G+ N++L G S +E + + G+EPN
Sbjct: 248 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNV 306
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ ++ C++G S+ I M ++ + P+ + LL G+ + ++ +L +
Sbjct: 307 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL 366
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI +V+NI I + K ++ ++A + M G+ PN+ Y +I K G+
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A F M + G P+ + + LC +++ A ++ + +G + S
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 363 LVTGLASISKVAEANELIGLMKK 385
++ +V E+ +L LM +
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVR 509
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
++V YG ++ +D AM FE+M GL ++ +L+ G +++ + +
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E GI N+ +N +I S C+ G + M R ++P+ + L+ G
Sbjct: 470 LEMLD-RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
K ++ K+L M G+ + Y I C++ R ++A AL M+S G+ PN+ T
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 588
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y ++ G AK+L+ S+T G + + + + + LC+ + AL++ +
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANEL 379
T ++ L ++ EA +L
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDL 678
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 10/214 (4%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ +YN V+ F + GDS YS EM + I P+ + ++A K +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL M K G+ YN + C + +EA L M S G++PN+ TY L++
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY-FLCQGGEYETALKVCRASMA----K 351
K G A+K+F SMT G EPD + TY L QG + AL A +
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPD-----IATYRTLLQGYATKGALVEMHALLDLMVRN 370
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P L+ A KV +A + M++
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY------GIEPN 181
D A + EM G+ LN + I+ + +E + I +E K++ G++P+
Sbjct: 463 DKAEELILEMLDRGI-----CLNTIFFNSIIDSHCKEGRVIESE--KLFDLMVRIGVKPD 515
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I C +G +LA M ++P+ +G L+ G+ + + +D + +
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G++ + YNI +Q L +R+ AK L + G + L TY ++HG K
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A ++F ++ + ++ F + L + G + A + A A G VP T
Sbjct: 636 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 695
Query: 362 SLVTGLASISKVAEANEL 379
+ L + E ++L
Sbjct: 696 LMAENLIEQGSLEELDDL 713
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 114/300 (38%), Gaps = 42/300 (14%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETY 185
+ A F+E+ + G S+ LN L V R + + + P TY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED-VGKVLQMME 244
+I C +G ++ L + +K R +A F LL G + + D + VL+ M
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEA----------------------KALLDG----- 277
+ G V YN ++ LC RS+EA +L+G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 278 -----------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
ML RGI P++ TY +I K ++ A ++ +M G PD +
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ C G+ + A+ + + G P+ T SL+ L + EA ++ M KR
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A +D A + M G++ + L+ G ++ +F E G+ PN
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS-SGVSPNII 587
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +++ + +++ + + + + + + ++L G K + ++ ++ Q +
Sbjct: 588 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ +NI I +L K R +EAK L + G+ P++ TY + ++G+L
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
E LF SM GC DS L Q G+ A
Sbjct: 708 EELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 120/284 (42%), Gaps = 36/284 (12%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
++ V NAL+ G EEV +F E V GI+P+ TY+ VI + E G+
Sbjct: 239 IKSFVPVYNALINGFCREHKMEEVFELFNEMA-VEGIDPDVITYSTVINTLSEMGNVEMA 297
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
++LA+M + PN F L+ G++ + + + M + G YN I
Sbjct: 298 LAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHG 357
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK------------- 308
LC + EA ++ M G+ PN TY LI GF K G+L GA +
Sbjct: 358 LCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPN 417
Query: 309 ----------------------LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
L +M NG C P++ F F LC G+ E A+KV
Sbjct: 418 VVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLN 477
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
G P+ +T ++ GL + + EA +++G +++ KS
Sbjct: 478 QMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKS 521
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 5/263 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H + YG+ M++ A+ ++M++ G+ + + L+ G + + I+ +
Sbjct: 355 IHGLCSYGK--MVE-AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMI- 410
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G PN Y ++ C + + ++ M + PN F + G K E
Sbjct: 411 TNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTE 470
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
KVL M + G A V YN + L KR+ EA ++ + IK NL TY ++
Sbjct: 471 WAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTIL 530
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG-W 353
GF G +GA ++ + GG +PDS + Y C+ GE +TA+++ KG
Sbjct: 531 SGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEG 590
Query: 354 VPHFSTMKSLVTGLASISKVAEA 376
P T SL+ G+ + V EA
Sbjct: 591 YPDVFTYTSLLWGVCNWIGVDEA 613
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 135/366 (36%), Gaps = 68/366 (18%)
Query: 63 CGASLAPESPLDRMAFSIAVSKLSQANHFNAI--SQLLEELKTRPDLRQNERFHVHSIVL 120
C L + PL + ++ N + S++L +LK P++ +H
Sbjct: 7 CSLLLKKQKPLVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNIL----LALHFFKS 62
Query: 121 YGQANMIDHAMQTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
+N H T+ M K G + +D + LL + K+ GI
Sbjct: 63 IANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLL-----------------QLMKLEGIS 105
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
N + + VI ++ +G + + +P+ + +L E+K++ + +
Sbjct: 106 CNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGI 165
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------------- 286
M++ GI V YN+ +++LCK R + A+ LL M +G P+
Sbjct: 166 YNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCR 225
Query: 287 -----------------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+ Y LI+GF +E +E +LF M G +PD +
Sbjct: 226 LGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVI 285
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
L + G E AL V +G P+ T SL+ G M R +
Sbjct: 286 NTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGY--------------FMGGRLCE 331
Query: 390 SGDMWN 395
+ D+WN
Sbjct: 332 ALDLWN 337
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ AM+ +M +YG +V N +L G +K E +I E ++ I+ N TYN
Sbjct: 470 EWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEM-EIKSNLVTYNT 528
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC +G I ++ +P++ + ++ + K+ + + +++ + K G
Sbjct: 529 ILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKG 588
Query: 248 IA-SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG-FGKEGNL 303
V Y + +C +EA LD M++ GI PN T+ L+ G F K G+L
Sbjct: 589 EGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHL 646
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ +EM G S N L+ G + V ++ + G PN TYN
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNM-FLKGCFPNEVTYN 296
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G S+L M PN +G L+ G K+ + D ++L ME+
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEER 356
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G ++Y++ I L K ++EEA L M +G +PN+ Y +I G +EG A
Sbjct: 357 GYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEA 416
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K++ M + GC P+ Y + + G E A++V R G + L+ G
Sbjct: 417 KEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDG 476
Query: 367 LASISKVAEA 376
L + +V EA
Sbjct: 477 LCGVGRVKEA 486
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 5/253 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
S + + F ++ +LL ++ + ER + YG+A++ + A+ F
Sbjct: 79 TLSSMIENYANLGDFASVEKLLSRIRLENRVII-ERSFIVVFRAYGKAHLPEKAVDLFHR 137
Query: 137 M-DKYGLRQSVDALNALLLGCILSKNYE---EVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M D++ ++SV + N++L I Y E I PN ++N VIK+
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G + M K P+ + L+ G KE + ++ +L M+ G +
Sbjct: 198 CKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+YN+ I LCK L+D M +G PN TY LIHG +G L+ A L
Sbjct: 258 VIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 313 MTNGGCEPDSYCF 325
M + C P+ +
Sbjct: 318 MVSSKCIPNDVTY 330
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 9/263 (3%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M++ G R + + L+ G EE ++ + + G PN Y+ VI C G
Sbjct: 353 MEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAE-KGCRPNIVVYSAVIDGLCREG 411
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ IL M PN + L+ GF+K E+ +V + M++ G + Y+
Sbjct: 412 KPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYS 471
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM--- 313
+ I LC + R +EA + ML+ GIKP+ Y +I G G+++ A KL+ M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+PD + + LC + A+ + + +G P T + + L+ S
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDS 591
Query: 374 AEAN-----ELIGLMKKRFPKSG 391
E EL+ + KR SG
Sbjct: 592 CEEGRSFLEELVARLLKRQRVSG 614
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 140/318 (44%), Gaps = 14/318 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMID 128
D + F+I + L + + L+ +K + P+L H ++ ++ G + N +D
Sbjct: 366 DVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNL------HTYNTLICGLLRLNRLD 419
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT-EFPKVYGIEPNSETYNK 187
A++ F M+ GL + A +L K+ E K I T E K GI PN N
Sbjct: 420 EALELFNSMESLGLETT--AYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNA 477
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+ S E G +++ + P+A + +L+ + K + +D K+L ME+ G
Sbjct: 478 SLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG 537
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V + N I +L K R +EA + M + P + TY L+ G GKEG ++ A
Sbjct: 538 CDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEAT 597
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M C P++ F LC+ GE + ALK+ P T +++ GL
Sbjct: 598 ALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGL 657
Query: 368 ASISKVAEANELIGLMKK 385
++V A L MKK
Sbjct: 658 IKENRVNYAFWLFHQMKK 675
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 119/268 (44%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+V G+ I+ M +EM+ GLR ++ + + +E I G
Sbjct: 234 MVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDA-G 292
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ TY +I + C +G ++ + +M+ S +P+ + LL F + +
Sbjct: 293 CGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK 352
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ ME G V + I I +LCK+ + +EA LD M +G+ PNL TY LI G
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGL 412
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ L+ A +LF SM + G E +Y + +F + + GE A+K G VP+
Sbjct: 413 LRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
+ + LA ++ EA E +KK
Sbjct: 473 VACNASLYSLAEQGRLEEAKEFFNGLKK 500
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 130/292 (44%), Gaps = 6/292 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +++ + L ++ + L EE+ R + N H+IV++G ++N +D A+
Sbjct: 822 DVFTYNLFLDALGKSGKIKELFDLYEEMLFR-GCKPNT--ITHNIVIFGLVKSNSLDKAI 878
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++ + L+ G + EE K+ F E YG PN YN ++
Sbjct: 879 DLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLD-YGCMPNCPLYNILMNG 937
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
F + GD + + M ++ IRP+ + +++ K +D + ++ G+
Sbjct: 938 FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN+ I L + +R EEA +L D M +RGI P+L TY LI G G +E A K++
Sbjct: 998 LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYE 1057
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ G EP+ + + G + A V + M G P+ T L
Sbjct: 1058 ELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 2/258 (0%)
Query: 130 AMQTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F ++ K + + S++A N+L+ G + ++ E +F + K G P+ TYN
Sbjct: 771 AYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKM-KNAGCTPDVFTYNLF 829
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + +SG ++ + EM + +PN +++ G K + + + +
Sbjct: 830 LDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDF 889
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y I L KL R EEAK + ML G PN Y L++GFGK+G++E A +
Sbjct: 890 SPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACE 949
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M G PD + + LC G+ + AL G P ++ GL
Sbjct: 950 LFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLG 1009
Query: 369 SISKVAEANELIGLMKKR 386
+V EA L M+ R
Sbjct: 1010 RSQRVEEALSLFDEMRNR 1027
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 147/347 (42%), Gaps = 31/347 (8%)
Query: 69 PESPLDRMAFSIAVSKLSQANH----FNAISQLLEELKTRPD-------LRQNERFHVHS 117
PES + + +S N FN+++++ + T LR + R
Sbjct: 83 PESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMV 142
Query: 118 IVL-YGQANMIDHAMQTFEEMDKY-----GLRQSVDALNALLLGCILSKNYEEVKRIFT- 170
+V Q +I ++ T+ + K GLR++ AL + + Y + I
Sbjct: 143 VVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLL 202
Query: 171 -------EFPKVY------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
E KVY GI+P+ +TY+ ++ + + D +V +L EM +RPN
Sbjct: 203 LKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNI 262
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
F + + + K ++ +L+ M+ G V Y + I +LC + AK L
Sbjct: 263 YTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLK 322
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M + KP+ TY L+ F G+L+ K+ ++ M G PD F + LC+ G+
Sbjct: 323 MKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGK 382
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ A +G P+ T +L+ GL ++++ EA EL M+
Sbjct: 383 VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSME 429
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 5/309 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A +A+ K + Q +E L RP++ F + I + G+A ID A +
Sbjct: 232 ALMVALGKRRDIETVMGLLQEMESLGLRPNIYT---FTI-CIRILGRAGKIDEAYGILKR 287
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
MD G V L+ + K +F + K +P+ TY ++ F + G
Sbjct: 288 MDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKM-KASSHKPDRVTYITLLDKFSDHG 346
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D ++ +EM P+ F +L+ K K ++ L +M+K G+A ++ YN
Sbjct: 347 DLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYN 406
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I L +L R +EA L + M S G++ TY I +GK G A K F M
Sbjct: 407 TLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTN 466
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G P+ Y L + G E A + G P T L+ +V +A
Sbjct: 467 GIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDA 526
Query: 377 NELIGLMKK 385
+L+ M++
Sbjct: 527 IKLLSEMEE 535
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 1/245 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G++ I +EEM G + + N ++ G + S + ++ ++ + P
Sbjct: 834 GKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMS-GDFSPT 892
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TY +I + G EM PN + +L+ GF K+ E ++ +
Sbjct: 893 PWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFR 952
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M K GI + Y+I + LC + + ++A + + G+ P+L Y +I+G G+
Sbjct: 953 RMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQ 1012
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+E A LF M N G PD Y + L G E A K+ KG P+ T
Sbjct: 1013 RVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYN 1072
Query: 362 SLVTG 366
+L+ G
Sbjct: 1073 ALIRG 1077
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ + F M K +++S++ + + E + KV G N +Y
Sbjct: 138 VEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKV-GFVLNGYSYI 196
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +SG + M + I+P+ + L+ K E V +LQ ME
Sbjct: 197 GLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + + I I+ L + + +EA +L M G P++ TY LI G L A
Sbjct: 257 GLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNA 316
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+LF M +PD + G+ + + A G++P T L+
Sbjct: 317 KELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDA 376
Query: 367 LASISKVAEANELIGLMKKR 386
L + KV EA + +MKK+
Sbjct: 377 LCKVGKVDEAFGTLDVMKKQ 396
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 1/257 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A + + A F +M G V N L S +E+ ++ E G +PN+
Sbjct: 800 KARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM-LFRGCKPNT 858
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N VI +S + ++ P +G L+ G K + E+ + +
Sbjct: 859 ITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEE 918
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G +YNI + K E A L M+ GI+P+L +Y ++ G
Sbjct: 919 MLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGK 978
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A F + G +PD C+ + L + E AL + +G P T +
Sbjct: 979 VDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNA 1038
Query: 363 LVTGLASISKVAEANEL 379
L+ L V EA ++
Sbjct: 1039 LILNLGIAGMVEEAGKM 1055
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 12/304 (3%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
L+E PD+ ++ +++++G + D A++ FE M+ ++ + N ++ G
Sbjct: 88 LDEFSVAPDV------YIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 156 CILSKNYEEVKRIFTEFPKVYGIE-PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
S N E+ + + E + G P+ TYN +I +F + + +M+ I
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ +L++G K+ E+ ++L M+ G V YN I +LC + EA +
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M P+L T+ L+ GF K G L A ++ M PD + + LC+
Sbjct: 262 LKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMW 394
G+ + A + + +G++P SLV GL ++ EA++L+ M R ++G +
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378
Query: 395 NAAL 398
++L
Sbjct: 379 YSSL 382
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 145/351 (41%), Gaps = 42/351 (11%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL-----KTRPDLRQNERFHVHSIVLYGQANMIDHA 130
+ ++ +S L ++ + +LLEE+ K+ PD+ I + +A+ I A
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTL----INAFYRASRIREA 188
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF--------------------- 169
E+M G+ V N L+ G + EE I
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHA 248
Query: 170 ----------TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
E K P+ T+N ++ FC++G +L EM R++I P+
Sbjct: 249 LCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 308
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +L+ G + + + +L+ + + G V Y + LCK EEA L+ M
Sbjct: 309 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 368
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
RG + + Y L+ G+ + GN+ A+++ A M + P + + + L + G
Sbjct: 369 VRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 428
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
A+ + +A+G+VP T +L+ GL ++V EA +L M R FP
Sbjct: 429 KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFP 479
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 136/328 (41%), Gaps = 10/328 (3%)
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSI 118
L+I G LA P D + ++ + L A +++L+ + PDL +
Sbjct: 224 LEILDGMKLAGPVP-DVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVT------FNT 276
Query: 119 VLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
+L G +A M+ A++ EEM + + V L+ G + + E +
Sbjct: 277 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR-Q 335
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ Y ++ C+SG+ + ++ EM + R + L++G+ +
Sbjct: 336 GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKA 395
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L M + + YNI + L K +A +L+ +++RG P++ TY LI G
Sbjct: 396 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 455
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K + A L M + GC P+ + LC+ G + A + K P+
Sbjct: 456 LCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
SL+ GL ++ +A ++ M+
Sbjct: 516 VVVYTSLIDGLCKSDRMDDACMVLDAMR 543
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 127/319 (39%), Gaps = 9/319 (2%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANMI 127
SP D + F+ + +A ++LEE+ PD+ V+ + GQ +
Sbjct: 268 SP-DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV-ITYTILVNGLCRVGQVQV- 324
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A EE+ + G V A +L+ G S EE ++ E V G Y+
Sbjct: 325 --AFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM-SVRGCRTGVVMYSS 381
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ +C +G+ ILAEM ++ P + ++L G K+ ++ + G
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V YN I LCK R EA L D M SRG PN T ++ G + G ++ A
Sbjct: 442 YVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAW 501
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L M+ P+ + LC+ + A V A +G + L+ +
Sbjct: 502 SLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSM 561
Query: 368 ASISKVAEANELIGLMKKR 386
+ +VAEA + M R
Sbjct: 562 SHGGRVAEAMAMYDEMVAR 580
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 20/315 (6%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
+L+ C ++ P D + ++I V+ L + LLEE+ +RQ ++
Sbjct: 291 LEVLEEMCRENILP----DVITYTILVNGLCRVGQVQVAFYLLEEI-----VRQG---YI 338
Query: 116 HSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
++ Y ++ I+ A + +EM G R V ++L+ G + N + + I
Sbjct: 339 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREI 398
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
E + + P TYN V+ + G S S+++++ + P+ + L+ G
Sbjct: 399 LAEMVSINMVPP-LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 457
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K ++ + + M G + LC++ R ++A +L+ M + PN+
Sbjct: 458 KANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVV 517
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
Y LI G K ++ A + +M G D + + + GG A+ +
Sbjct: 518 VYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEM 577
Query: 349 MAKGWVPHFSTMKSL 363
+A+G++P ST K+L
Sbjct: 578 VARGFLPDGSTSKTL 592
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 37/244 (15%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G + + +YN ++ +SG + ++ PN F +L+ G K +
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ L+ +++ +A V ++N+ I L K ++A L + M S +KP + TY +I G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141
Query: 297 FGKEGNLEGAKKLFASMTN-------------------------------------GGCE 319
K GNLE A++L M G
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + +C+ G+ E AL++ G VP T S++ L KV EA E+
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261
Query: 380 IGLM 383
+ M
Sbjct: 262 LKTM 265
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%)
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E+ G V+ YN + L K + +L G PNL T+K LI G K G
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A + ++ PD Y F + + L + G + A+K+ + P T ++
Sbjct: 79 MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138
Query: 364 VTGLASISKVAEANELIGLMKKRFPKS 390
++GL + +A EL+ M ++ KS
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKS 165
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 2/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I G+ ++ A+ F K G +V A +A++ S E ++F K G
Sbjct: 206 ISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKA-G 264
Query: 178 IEPNSETYNKVIKSFCESG-DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
+PN TYN +I + + G D I EM+++ + P+ F L+A + +ED
Sbjct: 265 CKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDS 324
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V M++ GI + YN I ++CK + E A +++ M + I PN+ TY +I G
Sbjct: 325 QRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDG 384
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+GK G E A L+ M G PD + + G ++ AL C+ G
Sbjct: 385 YGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKAD 444
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
T +L+ K +A L MK
Sbjct: 445 VVTYNALIDAYGKQGKYKDAAGLFDKMK 472
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ FEEM K G+ N+L+ C +E+ +R+F E + GIE + TYN +I
Sbjct: 289 ALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQR-RGIEQDIFTYNTLI 347
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF------------YKEHK----- 232
+ C+ G SI++ MR K+I PN + ++ G+ Y + K
Sbjct: 348 DAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVR 407
Query: 233 ------------------YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
++D + ME+ G+ + V YN I + K + ++A L
Sbjct: 408 PDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGL 467
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
D M + G+ PN+ TY LI + K G + A +F G +PD + C+
Sbjct: 468 FDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCK 527
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK-KRFPKSGD 392
G E A+ + + G P+ T SL+ +V G M F K GD
Sbjct: 528 CGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGD 586
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 49/259 (18%)
Query: 98 LEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
++E RPD R ++++ +Y + D A+ ++M++ GL+ V NAL+
Sbjct: 401 MKESGVRPD-----RVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAY 455
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
Y++ +F + K G+ PN TY+ +I ++ ++G SI E +R ++P+
Sbjct: 456 GKQGKYKDAAGLFDKM-KAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPD 514
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS--------------- 261
+ L+ K ED +LQ M + GI + YN I +
Sbjct: 515 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKG 574
Query: 262 -----------------LCKLKRSEE----------AKALLDGMLSRGIKPNLDTYKHLI 294
+CK S++ A ++ M G+KPN+ T+ ++
Sbjct: 575 NMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAIL 634
Query: 295 HGFGKEGNLEGAKKLFASM 313
+ + +L+ A L M
Sbjct: 635 NACSRCSSLQEASVLLEQM 653
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 3/172 (1%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL- 274
N + +++ + + + + KV Q M+K G + YN I + C + KAL
Sbjct: 233 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDA-CGKGGVDLKKALD 291
Query: 275 -LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+ M G++P+ T+ LI + E ++++FA M G E D + + +C
Sbjct: 292 IFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVC 351
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+GG+ E A + + K P+ T +++ G + EA L MK+
Sbjct: 352 KGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKE 403
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+I I +L +L + E A + + G N+ Y ++ +G+ G A K+F +M
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262
Query: 316 GGCEPDSYCFFMFTYFLCQGG-EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC+P+ + +GG + + AL + +G P T SL+ + S
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWE 322
Query: 375 EANELIGLMKKR 386
++ + M++R
Sbjct: 323 DSQRVFAEMQRR 334
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 143/332 (43%), Gaps = 40/332 (12%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
+ Q ++ +S++LE L+T+P +E + + YG+ + A + F +M K G
Sbjct: 113 RFKQLKKWSLVSEILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAERVFGDMHKKGYS 172
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG---DSSS 200
SV + AL+ K Y + + +F G EP++ TY ++K F E ++
Sbjct: 173 PSVISHTALMEAYGKGKQYNKAESVFRRMLSS-GPEPSALTYQLILKIFVEGNKFKEAEE 231
Query: 201 VYSILAEMRRKSIRPNATDFGLLL-----AGFYK-------------------------- 229
+ L + + ++P+ F +++ AG Y+
Sbjct: 232 TFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTVTYNSLMS 291
Query: 230 -EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
E Y++V K M++ G+ V Y + I + K +R EEA A+ + ML G++P
Sbjct: 292 FETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 351
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCR 346
Y L+ F G ++ A+ +F SM C PD SY + Y + E A K R
Sbjct: 352 AYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAY--VNASDMEGAEKFFR 409
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
G+ P+ T +L+ G A IS + + E
Sbjct: 410 RLKQDGFEPNVVTYGTLIKGYAKISNLEKMME 441
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 122/303 (40%), Gaps = 21/303 (6%)
Query: 26 LLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPE-SPL--DRMAFSIAV 82
+LS+G E +ALT + I ++ E N F+ + L E SPL D+ F + +
Sbjct: 201 MLSSGPEPSALTYQ-----LILKIFVEGNKFKEAEETFETLLDDEKSPLKPDQKMFHMMI 255
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID----HAMQTFEEMD 138
+A ++ ++ ++ ER S V Y + +T+++M
Sbjct: 256 YMYRKAGNYEKARKIFGLMR--------ERGVPQSTVTYNSLMSFETNYKEVSKTYDQMQ 307
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+ GLR V + L+ ++ EE +F E G+ P + YN ++ +F SG
Sbjct: 308 RAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMV 366
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
++ MRR P+ + +L+ + E K + +++ G V Y
Sbjct: 367 DQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFEPNVVTYGTL 426
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I+ K+ E+ + M GIK N Y ++ +GK + A F M G
Sbjct: 427 IKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYGKNKDFGSAVFWFKEMGFCGV 486
Query: 319 EPD 321
PD
Sbjct: 487 PPD 489
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 92/240 (38%), Gaps = 36/240 (15%)
Query: 83 SKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGL 142
S +S ++ +S+ ++++ R LR + + I YG+A + A+ FEEM G+
Sbjct: 288 SLMSFETNYKEVSKTYDQMQ-RAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 346
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIF---------------TEFPKVY----------- 176
R + A N LL +S ++ + +F T Y
Sbjct: 347 RPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGAEK 406
Query: 177 --------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
G EPN TY +IK + + + + EM+ I+ N + ++ +
Sbjct: 407 FFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDAYG 466
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K + + M CG+ NI + SL K + +E LL G S+ +D
Sbjct: 467 KNKDFGSAVFWFKEMGFCGVPPDRKATNI-LLSLAKTEAEKEEANLLVGYSSKYSNGQMD 525
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 8/269 (2%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEE+ + G++ A NALL G + + ++ + + +E K G+ P+ TY+ +I ++
Sbjct: 298 FEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEK-RGVSPDEHTYSLLIDAYV 356
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G S +L EM ++PN+ F LLAGF +++ +VL+ M+ G+
Sbjct: 357 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 416
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN+ I + K + A D MLS GI+P+ T+ LI K G A+++F +M
Sbjct: 417 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 476
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYE--TALKVCRASM-AKGWVPHFSTMKSLVTGLASI 370
GC P C + + G+ E +K M ++G +P+ T +LV
Sbjct: 477 ERRGCLP---CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 533
Query: 371 SKVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ +A E + MK S M+NA +
Sbjct: 534 GRFNDAIECLEEMKSVGLKPSSTMYNALI 562
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 3/274 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +S+++ Y A + A +EM+ ++ + + LL G +++ ++ E
Sbjct: 346 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 405
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G++P+ + YN VI +F + + M + I P+ + L+ K
Sbjct: 406 M-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 464
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++ ++ + ME+ G YNI I S +R ++ K LL M S+GI PN+ T+
Sbjct: 465 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 524
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ +GK G A + M + G +P S + Q G E A+ R +
Sbjct: 525 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 584
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P + SL+ + AEA ++ MK+
Sbjct: 585 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 618
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 8/282 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
FS ++ + Q+L+E+K+ +PD +F+ I +G+ N +DHAM T
Sbjct: 382 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD----RQFYNVVIDTFGKFNCLDHAMTT 437
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+ M G+ N L+ C V E + G P + TYN +I S+
Sbjct: 438 FDRMLSEGIEPDRVTWNTLI-DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 496
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + +L +M+ + I PN L+ + K ++ D + L+ M+ G+
Sbjct: 497 DQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 556
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I + + SE+A M S G+KP+L LI+ FG++ A + M
Sbjct: 557 MYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 616
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G +PD + L + +++ V + G P
Sbjct: 617 KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 658
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 136/324 (41%), Gaps = 41/324 (12%)
Query: 102 KTRPDLRQNERFHVHSIVLYG--QANMIDHAM--QTFEEMDKYGLRQSVDALNALLLGCI 157
K R D Q++ F +S+V+ ++N ID M + ++E+++ L V +N +++G
Sbjct: 193 KMRQDGYQSD-FVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFA 251
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
S + + ++ + G+ + T +I + +SG + ++ E+R+ I+P
Sbjct: 252 KSGDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 310
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ LL G+ K +D ++ MEK G++ + Y++ I + R E A+ +L
Sbjct: 311 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 370
Query: 278 M-----------LSR------------------------GIKPNLDTYKHLIHGFGKEGN 302
M SR G+KP+ Y +I FGK
Sbjct: 371 MEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC 430
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+ A F M + G EPD + C+ G + A ++ A +G +P +T
Sbjct: 431 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 490
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
++ + + L+G MK +
Sbjct: 491 MINSYGDQERWDDMKRLLGKMKSQ 514
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 111/259 (42%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A T+ EM G+ V ++++ ++ ++ + K G+ P+ TYN
Sbjct: 218 DKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYNS 276
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ +C SG L +MR + PN + L+ K + + K+ M K G
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + Y +Q E ALLD M+ GI+P+ + LI + K+ ++ A
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+F+ M G P+ C+ LC+ G + A+ + +G P+ SL+ GL
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Query: 368 ASISKVAEANELIGLMKKR 386
+ K +A ELI M R
Sbjct: 457 CTCDKWDKAEELILEMLDR 475
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 5/277 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H ++I++ +A +D + K G R LL G K + I
Sbjct: 93 HTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSIL---AEMRRKSIRPNATDFGLLLAGFY 228
G P+ +YN ++K C+ S +L A+ R P+ + +L GF+
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
KE + M GI V Y+ I +LCK + ++A +L+ M+ G+ P+
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY ++HG+ G + A M + G EP+ + +LC+ G A K+ +
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+G P +T ++L+ G A+ + E + L+ LM +
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 369
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 9/254 (3%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV--YGIEPNSETYN 186
HA+ + M + G++ N L+ C +K E+V + F K+ +G+ PN Y
Sbjct: 361 HAL--LDLMVRNGIQPDHHVFNILI--CAYAKQ-EKVDQAMLVFSKMRQHGLNPNVVCYG 415
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK-VLQMMEK 245
VI C+SG +M + + PN + L+ G K++ + +L+M+++
Sbjct: 416 TVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR 475
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
GI +N I S CK R E++ L D M+ G+KP++ TY LI G G ++
Sbjct: 476 -GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDE 534
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A KL ASM + G +PD + C+ + AL + + ++ G P+ T ++
Sbjct: 535 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594
Query: 366 GLASISKVAEANEL 379
GL + A A EL
Sbjct: 595 GLFHTRRTAAAKEL 608
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
++V YG ++ +D AM FE+M GL ++ +L+ G +++ + +
Sbjct: 410 NVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E GI N+ +N +I S C+ G + M R ++P+ + L+ G
Sbjct: 470 LEMLD-RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
K ++ K+L M G+ + Y I C++ R ++A AL M+S G+ PN+ T
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 588
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y ++ G AK+L+ S+T G + + + + + LC+ + AL++ +
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANEL 379
T ++ L ++ EA +L
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDL 678
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D AM+ M K G+ N++L G S +E + + G+EPN
Sbjct: 248 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKM-RSDGVEPNV 306
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ ++ C++G S+ I M ++ + P+ + LL G+ + ++ +L +
Sbjct: 307 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL 366
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI +V+NI I + K ++ ++A + M G+ PN+ Y +I K G+
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A F M + G P+ + + LC +++ A ++ + +G + S
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 363 LVTGLASISKVAEANELIGLMKK 385
++ +V E+ +L LM +
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVR 509
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 94/214 (43%), Gaps = 10/214 (4%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ +YN V+ F + GDS YS EM + I P+ + ++A K +
Sbjct: 196 GSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKA 255
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL M K G+ YN + C + +EA L M S G++PN+ TY L++
Sbjct: 256 MEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNY 315
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY-FLCQGGEYETALKVCRASMA----K 351
K G A+K+F SMT G EPD + TY L QG + AL A +
Sbjct: 316 LCKNGRSTEARKIFDSMTKRGLEPD-----IATYRTLLQGYATKGALVEMHALLDLMVRN 370
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P L+ A KV +A + M++
Sbjct: 371 GIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQ 404
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY------GIEPN 181
D A + EM G+ LN + I+ + +E + I +E K++ G++P+
Sbjct: 463 DKAEELILEMLDRGI-----CLNTIFFNSIIDSHCKEGRVIESE--KLFDLMVRIGVKPD 515
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I C +G +LA M ++P+ +G L+ G+ + + +D + +
Sbjct: 516 IITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFK 575
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G++ + YNI +Q L +R+ AK L + G + L TY ++HG K
Sbjct: 576 EMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNN 635
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A ++F ++ + ++ F + L + G + A + A A G VP T
Sbjct: 636 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYS 695
Query: 362 SLVTGLASISKVAEANEL 379
+ L + E ++L
Sbjct: 696 LMAENLIEQGSLEELDDL 713
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 114/300 (38%), Gaps = 42/300 (14%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETY 185
+ A F+E+ + G S+ LN L V R + + + P TY
Sbjct: 37 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSR-YNRMARAGAGKVTPTVHTY 95
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED-VGKVLQMME 244
+I C +G ++ L + +K R +A F LL G + + D + VL+ M
Sbjct: 96 AILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT 155
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEA----------------------KALLDG----- 277
+ G V YN ++ LC RS+EA +L+G
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEG 215
Query: 278 -----------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
ML RGI P++ TY +I K ++ A ++ +M G PD +
Sbjct: 216 DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 275
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ C G+ + A+ + + G P+ T SL+ L + EA ++ M KR
Sbjct: 276 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 335
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A +D A + M G++ + L+ G ++ +F E G+ PN
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS-SGVSPNII 587
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN +++ + +++ + + + + + + ++L G K + ++ ++ Q +
Sbjct: 588 TYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 647
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ +NI I +L K R +EAK L + G+ P++ TY + ++G+L
Sbjct: 648 CLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSL 707
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
E LF SM GC DS L Q G+ A
Sbjct: 708 EELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ E++ G V N +L + +E + + P +G EP+ +YN V+
Sbjct: 213 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPS-FGCEPDVVSYNAVL 271
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K C + V ++ EM R + PN F L++ + +E V +VL M + G
Sbjct: 272 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCT 331
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y I +CK E A +L+ M S G+KPN+ Y L+ G E ++L
Sbjct: 332 PDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 391
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M + C D F + F CQ G + +++ + G +P T +++ G
Sbjct: 392 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 451
Query: 370 ISKVAEANELIGLM 383
+ EA L+ M
Sbjct: 452 EGLIDEAVMLLKSM 465
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A + + +L+EE+ R N I + + + +
Sbjct: 263 DVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEV 321
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G + ++ G + E I P YG++PN YN ++K C
Sbjct: 322 LAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS-YGLKPNVVCYNTLLKGLC 380
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +LAEM K + F +L+ F + + V ++L+ M + G V
Sbjct: 381 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI 440
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M + G KPN +Y ++ G A+ L + M
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 500
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC + F FLC+ G E A+++ + + G P + +++ GL K
Sbjct: 501 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 560
Query: 374 AEANELIGLMKKR 386
EA EL+ +M +
Sbjct: 561 DEALELLNVMVNK 573
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 150/383 (39%), Gaps = 80/383 (20%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANM 126
P + + F+ +S L + F + ++L ++ PD+R +++ ++ G +
Sbjct: 296 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIR------MYATIIDGICKEGH 349
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPK----------- 174
++ A + M YGL+ +V N LL G ++ +EE + + E F K
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409
Query: 175 ----------------------VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+G P+ TY VI FC+ G +L M
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+PN + ++L G ++ D ++ M + G +N I LCK E+A
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF------ 326
LL ML G P+L +Y +I G GK G + A +L M N G P++ +
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589
Query: 327 -----------MFTYF------------------LCQGGEYETALKVCRASMAKGWVPHF 357
MF LC+ GE E A++ ++ G VP+
Sbjct: 590 SREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNE 649
Query: 358 STMKSLVTGLASISKVAEANELI 380
ST L+ GLAS V EA E++
Sbjct: 650 STYTILIRGLASEGFVKEAQEML 672
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NA++ G + E +R+ P + PN+ TY V+++ C G + ++L EM
Sbjct: 131 NAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R+ P + ++L + + +VL+ + G A V N+ + ++C +
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA LL + S G +P++ +Y ++ G ++L M C P+ F
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+LC+ G +E +V + G P +++ G+ + A+E++ R P
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL----NRMPS 362
Query: 390 SG 391
G
Sbjct: 363 YG 364
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 122/288 (42%), Gaps = 12/288 (4%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QA 124
+ PLD + F+I V Q + + +LLE++ PD+ ++ V+ G +
Sbjct: 399 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI------TYTTVINGFCKE 452
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ID A+ + M G + + + +L G ++ + + + + ++ + G N T
Sbjct: 453 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ-QGCPLNPIT 511
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I C+ G +L +M P+ + ++ G K K ++ ++L +M
Sbjct: 512 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 571
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G++ +Y+ +L + R + + D + I+ + Y +I K G E
Sbjct: 572 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 631
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
A + A M + GC P+ + + L G + A ++ +KG
Sbjct: 632 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 3/129 (2%)
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN + C+ + E A+ L + + PN TY ++ G + A +
Sbjct: 127 VVAYNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLD 183
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M GC P + + C+GG + +A++V A+G ++ +
Sbjct: 184 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQG 243
Query: 372 KVAEANELI 380
V EA L+
Sbjct: 244 SVDEALHLL 252
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 142/318 (44%), Gaps = 31/318 (9%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVL--YGQANMID 128
D ++ ++ L QA L +E+K PD+ + ++I++ + +A +I+
Sbjct: 451 DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDV------YTYTILIDSFCKAGLIE 504
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F+EM G +V ALL + SK + IF PN+ TY+ +
Sbjct: 505 QARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA-ACYPNAVTYSAL 563
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C++G+ + ++ S G + + FY E + C I
Sbjct: 564 IDGLCKAGEIQKACEVYEKLIGTS--------GNVESDFYFEGN-----------DTCTI 604
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A V Y I LCK ++ +A LLD ML+ G +PN Y LI GF K G ++ A++
Sbjct: 605 APNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQE 664
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+F MT G P + + + + G + A+KV + P+ T +++ GL+
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLS 724
Query: 369 SISKVAEANELIGLMKKR 386
+ ++ +A L+ LM+++
Sbjct: 725 KVGEIEKALNLLSLMEEK 742
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 25/250 (10%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NA LL ++ K YEE+ KV N+ +++ + C G + IL EM
Sbjct: 394 NAELLD-LVEKVYEEMLAASCVLNKV-----NTANFSRCL---CGVGKFEKAFQILKEMM 444
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
RK P+ + + ++ + K E + Q M++ G+ V Y I I S CK E
Sbjct: 445 RKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIE 504
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A++ D M S G PN+ TY L+H + K L A +F M + C P++ +
Sbjct: 505 QARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALI 564
Query: 330 YFLCQGGEYETALKVCRASMAKG----------------WVPHFSTMKSLVTGLASISKV 373
LC+ GE + A +V + P+ T +L+ GL KV
Sbjct: 565 DGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKV 624
Query: 374 AEANELIGLM 383
++A+EL+ M
Sbjct: 625 SDAHELLDAM 634
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 107/276 (38%), Gaps = 14/276 (5%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FE D + +V AL+ G ++ + + G EPN Y+ +I FC
Sbjct: 596 FEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAA-GCEPNQIVYDALIDGFC 654
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + + M + P+ + L+ +K+ + + KVL M V
Sbjct: 655 KIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVV 714
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I L K+ E+A LL M +G PN+ TY LI G GK G + + KLF M
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG-----LA 368
+ GC P+ + + C G + A + W H V G +A
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIA 834
Query: 369 SISKVAEANE--------LIGLMKKRFPKSGDMWNA 396
S+ + E + G++ F K+G + A
Sbjct: 835 SLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETA 870
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++I E+ + S L MR S PN + LL+GF K+ ++ +++ MM
Sbjct: 275 TQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMT 334
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G +++N + C A L + M + G P Y I + L
Sbjct: 335 EGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPN 394
Query: 306 AK------KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
A+ K++ M C + F+ LC G++E A ++ + M KG+VP ST
Sbjct: 395 AELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTST 454
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
++T L KV ++ L MK+
Sbjct: 455 YTKVITFLCQAKKVEKSFLLFQEMKR 480
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 143/400 (35%), Gaps = 47/400 (11%)
Query: 16 VNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDR 75
V Y L L AG+ A + EK T ++S+ F D C ++AP +
Sbjct: 558 VTYSAL-IDGLCKAGEIQKACEVYEKLIGTSGNVESDFY-FEGNDTC---TIAP----NV 608
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ + + L +A + +LL+ + N+ + I + + ID+A + F
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLA-AGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M K G SV +L+ + ++ +E PN TY +I +
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND-SCNPNVVTYTAMIDGLSKV 726
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G+ ++L+ M K PN + L+ G K K + K+ + M G A Y
Sbjct: 727 GEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTY 786
Query: 256 NIRIQSLCKLKRSEEAKALLD-----------------------------GML----SRG 282
+ I C +EA LLD G+L S
Sbjct: 787 RVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHE 846
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF---LCQGGEYE 339
P Y LI F K G LE A +L + + M+ LC + E
Sbjct: 847 TVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVE 906
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A + KG VP SLV GL ++K EA +L
Sbjct: 907 EAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 16/268 (5%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIE 179
A + ++ E D+ LR+ LN L+ C + + EE+ R+ K +G
Sbjct: 150 ARTAERLLREIGEDDREVLRR---LLNVLVRRCCRHGLWDEALEELGRL-----KDFGYR 201
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P++ TYN +++ +G + + EM + + G K ++ D
Sbjct: 202 PSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADA--- 258
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M+EK + I L + EA + L M PN+ TY+ L+ GF K
Sbjct: 259 LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 318
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ K++ M GC P+ F + C G+Y A K+ G P +
Sbjct: 319 KKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVA 378
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRF 387
+ + ++ A EL+ L++K +
Sbjct: 379 YNIFIGSICGQEELPNA-ELLDLVEKVY 405
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 78/214 (36%), Gaps = 12/214 (5%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY ++ F + I+ M + PN + F L+ G+ Y K+
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL------LDGMLSRGI---KPNLDTY 290
M CG G YNI I S+C + A+ L + ML+ K N +
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+ G GK E A ++ M G PD+ + FLCQ + E + + +
Sbjct: 424 SRCLCGVGK---FEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKR 480
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G P T L+ + +A M+
Sbjct: 481 AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 514
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 6/229 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A+ M++ G +V AL+ G + + ++F + G PN TY
Sbjct: 729 IEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM-NSKGCAPNYVTYR 787
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C +G + +L EM+ + + + GF K K+ +L+ ME
Sbjct: 788 VLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK--KFIASLGLLEEMESH 845
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT---YKHLIHGFGKEGNL 303
VY + I S K R E A L ++ N+ + Y LI +
Sbjct: 846 ETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQV 905
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
E A L+ MT G PD F L + +++ AL++C +G
Sbjct: 906 EEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEG 954
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 4/265 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+HS+ Y + N A+ F M + ++ +L+ G ++E + E
Sbjct: 122 IHSLCKYRRVN---EALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ I PN T+N ++ +FC+ G + +L M + P+ + L+ G+ +
Sbjct: 179 L-NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ K+ +M G V Y+I I CK KR +EAK L + M+ +G PN +Y LI
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
HG + G L A+ LF +M G P+ Y + + C+ G A ++ RA +
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357
Query: 355 PHFSTMKSLVTGLASISKVAEANEL 379
P+ LV + + +A EL
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDAREL 382
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 12/319 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ F+ ++ L + F +L +++ R PD + ++ ++ G + + A+
Sbjct: 46 VTFTTLINGLGKVGKFAQAVELFDDMVARGCQPD------DYTYTTIINGLCKIGETALA 99
Query: 133 T--FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F++M++ G + +V + L+ + E IF+ + K I P TY +I+
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFS-YMKAKDISPTIFTYTSLIQ 158
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C ++L EM +I PN F +L+ F KE K VL+ M + G+
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN + EA+ L D M+++G KP++ +Y LI+G+ K ++ AK+LF
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLF 278
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G P++ + + LCQ G A + + G +P+ T L+ G
Sbjct: 279 NEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQ 338
Query: 371 SKVAEANELIGLMKKRFPK 389
+ +A L M+ + K
Sbjct: 339 GYLGKAFRLFRAMQSTYLK 357
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 1/263 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q +D + K GL+ ++ L+ G + + +F + G +P
Sbjct: 20 FCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMV-ARGCQP 78
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY +I C+ G+++ + +M + N + L+ K + + +
Sbjct: 79 DDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIF 138
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ I+ + Y IQ LC R +EA ALL+ M S I PN+ T+ L+ F KE
Sbjct: 139 SYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKE 198
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A+ + +MT G EPD + Y E A K+ + KG P +
Sbjct: 199 GKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSY 258
Query: 361 KSLVTGLASISKVAEANELIGLM 383
L+ G ++ EA +L M
Sbjct: 259 SILINGYCKAKRIDEAKQLFNEM 281
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 101 LKTRPDLRQNERFHVHSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCIL 158
LKT ++ ++ ++YG + + A + F+ M G + V + + L+ G
Sbjct: 208 LKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCK 267
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
+K +E K++F E G PN+ +YN +I C+ G + M PN
Sbjct: 268 AKRIDEAKQLFNEMIH-QGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLY 326
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ +LL GF K+ ++ + M+ + + +YNI + ++CK ++A+ L +
Sbjct: 327 TYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSEL 386
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
G++PN+ Y +I+G KEG L+ A + F +M + GC PD + +
Sbjct: 387 FVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSY 433
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 4/216 (1%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
E V + TE G+EP+ TYN ++ + + + M K +P+ + +
Sbjct: 205 EGVLKTMTEM----GVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSI 260
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G+ K + ++ ++ M G YN I LC+L R EA+ L M + G
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG 320
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
PNL TY L+ GF K+G L A +LF +M + +P+ + + +C+ G + A
Sbjct: 321 NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDAR 380
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
++ G P+ +++ GL + EA E
Sbjct: 381 ELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 130/312 (41%), Gaps = 6/312 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV--HSIVLYGQANMIDHAMQTF 134
++ + L + + S LL E+ + + F+V + G+ + ++T
Sbjct: 152 TYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTM 211
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
EM G+ V N+L+ G + E +++F + G +P+ +Y+ +I +C+
Sbjct: 212 TEM---GVEPDVVTYNSLMYGYSMWTEVVEARKLF-DVMITKGCKPDVFSYSILINGYCK 267
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + EM + PN + L+ G + + + + + M G +
Sbjct: 268 AKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYT 327
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y I + CK +A L M S +KPNL Y L++ K GNL+ A++LF+ +
Sbjct: 328 YAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELF 387
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +P+ + LC+ G + AL+ R G P + ++ G +
Sbjct: 388 VIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDES 447
Query: 375 EANELIGLMKKR 386
A LIG M+ R
Sbjct: 448 RAVHLIGEMRDR 459
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
ME G++ NI I C+L+R + ++L + G++P + T+ LI+G GK G
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A +LF M GC+PD Y + LC+ GE A + + G + T +
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ L +V EA ++ MK +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAK 144
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 35/207 (16%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN+ T N +I FC+ +S+LA+ + ++P F L+ G K V
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGK------V 58
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
GK Q +E L D M++RG +P+ TY +I+G
Sbjct: 59 GKFAQAVE-----------------------------LFDDMVARGCQPDDYTYTTIING 89
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G A LF M GC+ + + + LC+ AL + AK P
Sbjct: 90 LCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPT 149
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
T SL+ GL + S+ EA+ L+ M
Sbjct: 150 IFTYTSLIQGLCNFSRWKEASALLNEM 176
>gi|242034145|ref|XP_002464467.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
gi|241918321|gb|EER91465.1| hypothetical protein SORBIDRAFT_01g018940 [Sorghum bicolor]
Length = 440
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 158/354 (44%), Gaps = 27/354 (7%)
Query: 49 LKSESNPFRILDICCGASLAPESP---LDRMAFSIAVSKLSQANH--FNAISQLLEELKT 103
+++ES+P RI + A + P R FS+A S+L++ A L T
Sbjct: 67 VRAESDPARIHSLVASALSGDDFPRIHTSRQLFSLATSRLTRLRRPDLAASLLDLLLAST 126
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
P + ++ LY D A++ F R V +L+ALL + + +
Sbjct: 127 PP----SPGLLARALSLYPGP---DDALRAFSSSPPAA-RSDV-SLSALLSAFLRAGRLD 177
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR----PNATD 219
E+K T +G+ P ++N ++ + ++ + ++ +L EM K ++ P+
Sbjct: 178 EIKSTITLAESSHGVAPGRASHNVLLHALVKNSELAAARKLLDEMANKKLKHRPAPDIIS 237
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +LAG + E K+L+ + + V YN RIQ K + + + LLD M
Sbjct: 238 YNTVLAGCSVQDDEEGFEKLLKEISLSNLEPNVVTYNCRIQWFSKKGETVKGEELLDVME 297
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM---------TNGGCEPDSYCFFMFTY 330
S+G+ PN TY L+ G+ KEGN+ A ++F M ++ G S + +
Sbjct: 298 SKGVAPNYLTYNALVQGYCKEGNVGAATRVFKRMKVMKRREGRSDLGVSAHSQVYVVLFR 357
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
L + + + AL +C++ A P F +K LV GL + EA +++ M+
Sbjct: 358 SLVEKEKLDDALWICKSCFAMKAAPPFEAVKGLVEGLVKAGRSTEAKDVVAKME 411
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 142/309 (45%), Gaps = 6/309 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
LD++++ ++ L + A Q+L++++ + N +++I++ + + A
Sbjct: 162 LDQVSYRTLINGLCKIGETRAALQMLKKIEGK---LVNTDVVMYNIIINSLCKDKAVSDA 218
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
Q + EM + V N+L+LG + +E +F E + I P+ T++ ++
Sbjct: 219 YQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMV-LKNINPDVYTFSILVD 277
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C+ G+ + ++LA M ++ + P+ + L+ G+ ++ V M + G+A
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAP 337
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YNI I L K+K +EA +L M +GI P+ TY LI G K G + A +L
Sbjct: 338 HAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLV 397
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M N G D + LC+ + A+ + + +G P T L+ GL
Sbjct: 398 DEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKG 457
Query: 371 SKVAEANEL 379
++ A ++
Sbjct: 458 GRLKNAQDV 466
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y N ++ A F M + G+ + N ++ G K +E +F E GI P
Sbjct: 314 YCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMC-CKGIAP 372
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I C+ G S + ++ EM I + + L+ K H + ++
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALV 432
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ++ GI + YNI I LCK R + A+ + +L +G N TY +I+G KE
Sbjct: 433 KKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKE 492
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G A+ L + M N G PD+ + L + E E A K+ R + +G +
Sbjct: 493 GLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 130/317 (41%), Gaps = 36/317 (11%)
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
P R + ++H + +++ + +F M + S+ N +L + + N
Sbjct: 16 PPFRASFCHYLHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHY 75
Query: 165 VKRI-FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
I + ++ GI P T+N ++ +C G+ + +SI A++ + P F L
Sbjct: 76 TTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTL 135
Query: 224 LAGF-----------YKEH---------------------KYEDVGKVLQMMEKCG---I 248
+ G + +H K + LQM++K +
Sbjct: 136 INGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLV 195
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ V +YNI I SLCK K +A L M+++ I P++ T+ LI GF G L+ A
Sbjct: 196 NTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFG 255
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M PD Y F + LC+ G A + M +G +P T SL+ G
Sbjct: 256 LFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYC 315
Query: 369 SISKVAEANELIGLMKK 385
+++V +A + M +
Sbjct: 316 LVNEVNKAKHVFSTMSR 332
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 154/378 (40%), Gaps = 35/378 (9%)
Query: 11 FNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPE 70
F+L V+YR L + L G+ AAL + +K +
Sbjct: 160 FHLDQVSYRTL-INGLCKIGETRAALQMLKKIEGKLVNT--------------------- 197
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANM 126
D + ++I ++ L + + QL E+ T+ PD+ +S++L +
Sbjct: 198 ---DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVT-----FNSLILGFCVVGQ 249
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A F EM + V + L+ N K + K G+ P+ TY+
Sbjct: 250 LKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMK-QGVIPDVVTYS 308
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ +C + + + + M R + P+A + +++ G K ++ + + M
Sbjct: 309 SLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCK 368
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA YN I LCKL R A L+D M + GI ++ TY LI K +++ A
Sbjct: 369 GIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKA 428
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L + + G +P Y + + LC+GG + A V + + KG+ + T ++ G
Sbjct: 429 IALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMING 488
Query: 367 LASISKVAEANELIGLMK 384
L EA L+ M+
Sbjct: 489 LCKEGLFNEAEVLLSKME 506
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A M K G+ V ++L+ G L + K +F+ ++ G+ P++ +YN
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRL-GVAPHAHSYN 343
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + S+ EM K I P+ + L+ G K + +++ M
Sbjct: 344 IMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNN 403
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + + YN I LCK ++A AL+ + +GI+P++ TY LI G K G L+ A
Sbjct: 404 GIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNA 463
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F + G +++ + + LC+ G + A + G +P T ++++
Sbjct: 464 QDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRA 523
Query: 367 L 367
L
Sbjct: 524 L 524
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 1/247 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F ++ K G + N L+ G L+ +E F + G + +Y +I
Sbjct: 113 AFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALH-FHDHVIALGFHLDQVSYRTLI 171
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ G++ + +L ++ K + + + +++ K+ D ++ M I+
Sbjct: 172 NGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRIS 231
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V +N I C + + +EA L M+ + I P++ T+ L+ K+GN+ AK +
Sbjct: 232 PDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNM 291
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M G PD + C E A V G PH + ++ GL
Sbjct: 292 LAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGK 351
Query: 370 ISKVAEA 376
I V EA
Sbjct: 352 IKMVDEA 358
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 8/303 (2%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
KLS A F+A+ ++++ L PD ++ + L G+ + A++ + M + G +
Sbjct: 122 KLSLA--FSAMGKIIK-LGYEPDTVTFSTL-INGLCLEGR---VSEALELVDRMVEMGHK 174
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
++ LNAL+ G L+ + + + G +PN TY V+K C+SG ++
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+L +M + I+ +A + +++ G K+ ++ + ME G + + +Y I+ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
R ++ LL M+ R I P++ + LI F KEG L A++L M G PD+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ C+ + + A + ++KG P+ T L+ G + + + EL M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 384 KKR 386
R
Sbjct: 414 SLR 416
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 2/313 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD + +SI + L + + L E++ + + + + I + A D +
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+M K + V A +AL+ + E + + E + GI P++ TY +I F
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGF 362
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ +L M K PN F +L+ G+ K + +D ++ + M G+ +
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN IQ C+L + E AK L M+SR ++P++ +YK L+ G G E A ++F
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
+ E D + + + +C + + A + + KG P T ++ GL
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 373 VAEANELIGLMKK 385
++EA+ L M++
Sbjct: 543 LSEADLLFRKMEE 555
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 132/299 (44%), Gaps = 2/299 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +AFS + + +L +E+ R + + + I + + N +D A
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ M G ++ N L+ G + ++ +F + + G+ ++ TYN +I+ FC
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFC 433
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
E G + EM + +RP+ + +LL G + E ++ + +EK + +
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YNI I +C + ++A L + +G+KP++ TY +I G K+G+L A LF M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
G P+ + + G+ + K+ G+ ST++ ++ LA + K
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLK 612
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 121/297 (40%), Gaps = 7/297 (2%)
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNA 151
+A+ E ++RP R + + S+V + D + ++M+ G+ ++ L+
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVV--ARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
++ C + ++ F+ K+ G EP++ T++ +I C G S ++ M
Sbjct: 113 MINCCCRCR---KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+P L+ G K D ++ M + G Y ++ +CK ++
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
A LL M R IK + Y +I G K+G+L+ A LF M G + D +
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C G ++ K+ R + + P +L+ K+ EA EL M +R
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/302 (18%), Positives = 122/302 (40%), Gaps = 36/302 (11%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQAN--MID 128
D + ++ + + +L +E+ + RPD+ + I+L G + +
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS------YKILLDGLCDNGEPE 474
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ FE+++K + + N ++ G + ++ +F P + G++P+ +TYN +
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPDVKTYNIM 533
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+ G S + +M PN + +L+ E K+++ +++CG
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Query: 249 ASGVNVYNIRIQSLCKLKRSE------------------------EAKALLDGMLSRGIK 284
+ + + +L ++ ++ +A L M + G K
Sbjct: 594 SVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYK 653
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
PN+ TY +I G + + M GC+P++ F LC+ + +A+ +
Sbjct: 654 PNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILL 713
Query: 345 CR 346
R
Sbjct: 714 LR 715
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+Y + ++S + EM R RP DF L + + +Y+ V + + M
Sbjct: 39 SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E GIA + +I I C+ ++ A + + ++ G +P+ T+ LI+G EG +
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A +L M G +P LC G+ A+ + + G+ P+ T +
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ + + A A EL+ M++R
Sbjct: 219 LKVMCKSGQTALAMELLRKMEER 241
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE--EVKRIFTEFPKVYGIEP 180
A+ + A+ T M K G V LL L +N + +F K G +P
Sbjct: 596 DASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNM-KAMGYKP 654
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN VIK S V +L +M + +PNA ++G K+ + +L
Sbjct: 655 NVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLL 714
Query: 241 QMME 244
+ ME
Sbjct: 715 RKME 718
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN TYN +I C+ G V ++L+EM +I PN F +L+ G KE K ED
Sbjct: 234 IPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDAD 293
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V++ M + G+ + Y+ + C + + A+ + + + +GIKPN+ +Y LI+G+
Sbjct: 294 EVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGY 353
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K+ NL A +LF ++ G +PD+ + + L + G A K+ + G P
Sbjct: 354 CKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDI 413
Query: 358 STMKSLVTGLASISKVAEA 376
+L+ G V EA
Sbjct: 414 CLHSTLLFGYFKYGLVEEA 432
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 136/315 (43%), Gaps = 9/315 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQT 133
+ FS + H++A+ L E++ L + +IV Y + ID A
Sbjct: 63 IDFSKLFKTMINMKHYSAVVSLFREMRI---LGIPISDSILNIVTNSYCLRHRIDCAFSV 119
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
K G+ +V N LL G + +F + + EPN Y V+
Sbjct: 120 LPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLS 179
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + S+L M + + +P+ + +++ K+ + +L M++ I +
Sbjct: 180 KRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIF 239
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I LCKL + E+ K LL M++ I PN+ T+ LI G KEG +E A ++ M
Sbjct: 240 TYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM 299
Query: 314 TNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G EPD +Y M Y C G+ + A +V KG P+ + L+ G
Sbjct: 300 IEKGVEPDIITYSAIMDGY--CLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKK 357
Query: 372 KVAEANELIGLMKKR 386
+A+A +L G + ++
Sbjct: 358 NLAKAMQLFGEISQK 372
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 110/210 (52%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+P+ TY+ VI + C+ + + ++L EM++K+I PN + L+ G K ++E V
Sbjct: 200 KPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKT 259
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L M I V+ ++I I LCK + E+A ++ M+ +G++P++ TY ++ G+
Sbjct: 260 LLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
G ++ A+++F + + G +P+ + + + C+ A+++ KG P
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKRFP 388
T +++ GL + ++ +A ++ M + P
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 6/214 (2%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L GQ +D A + F + G++ ++ + + L+ G KN + ++F E + G++
Sbjct: 320 LRGQ---VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQ-KGLK 375
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P++ TY+ ++ E G I EM R P+ LL G++K E+ +
Sbjct: 376 PDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLL 435
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+E+ + ++ Y + I LCK R EA A+ + + S G+ P++ TY +I GF +
Sbjct: 436 FSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCR 495
Query: 300 EGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYF 331
EG + K + M + GC + +Y M +F
Sbjct: 496 EGLFDEVKGILRKMEDNGCPANNITYNVIMQGFF 529
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 1/193 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
AMQ F E+ + GL+ + +L G I + K+IF E +V G P+ ++ ++
Sbjct: 362 AMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRV-GPTPDICLHSTLL 420
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + G + +++ R N + + +++ G K + + + + + G+
Sbjct: 421 FGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLI 480
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN+ I C+ +E K +L M G N TY ++ GF + +
Sbjct: 481 PDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSF 540
Query: 310 FASMTNGGCEPDS 322
M G D+
Sbjct: 541 MKEMAGRGFSFDA 553
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 83/194 (42%), Gaps = 12/194 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMID 128
D + +S + L + ++ +E+ PD+ +HS +L+G + +++
Sbjct: 377 DTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDI------CLHSTLLFGYFKYGLVE 430
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM F ++++ ++ ++ G + E IF + P + G+ P+ TYN +
Sbjct: 431 EAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSI-GLIPDVRTYNVM 489
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I FC G V IL +M N + +++ GF++ +K ++ ++ M G
Sbjct: 490 ITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGF 549
Query: 249 ASGVNVYNIRIQSL 262
+ + I L
Sbjct: 550 SFDATTTGVLINVL 563
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 96/224 (42%), Gaps = 12/224 (5%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAM 131
++SI ++ + + QL E+ + PD +S +L+G + I A
Sbjct: 345 SYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVT------YSTILHGLIEVGRIGDAK 398
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F+EM + G + + LL G EE +F++ + + N Y VI
Sbjct: 399 KIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRE-DTNISFYTVVING 457
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++ ++I ++ + P+ + +++ GF +E +++V +L+ ME G +
Sbjct: 458 LCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPAN 517
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
YN+ +Q + + E + + M RG + T LI+
Sbjct: 518 NITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 12/300 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQA--NMID 128
D + FS V L + ++++ + R PD+ ++ ++ G + +D
Sbjct: 265 DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV------TYTTLMDGHCLQSEMD 318
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ F+ M + G V + L+ G ++ +F E + I P+++TYN +
Sbjct: 319 EAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI-PDTKTYNTL 377
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C G ++ EM + P+ + +LL K E+ +L+ +E +
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNL 437
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ VYNI I +C+ E A+ L + S+G+ P++ TY +IHG K G L A K
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M C PD + Q E A+++ +A+G+ ST LV L+
Sbjct: 498 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLS 557
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 11/277 (3%)
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
FH S+ N +D A+ +F + S+ LL K+Y V + T+
Sbjct: 27 FHSKSL----HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM 82
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+G+ PN T N +I SFC +S+LA++ + +P+ T F L+ G E K
Sbjct: 83 DS-FGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGK 141
Query: 233 YEDVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+G+ L + +K G V Y I LCK+ + A LL M +P++
Sbjct: 142 ---IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVI 198
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y +I K+ + A LF+ M G PD + + + LC E++ + +
Sbjct: 199 YTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV 258
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+P ++V L KV EA+E++ +M +R
Sbjct: 259 NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 295
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 115/260 (44%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ F++M G + +V L+ G N R+ + +P+ Y
Sbjct: 142 IGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ-GNCQPDVVIYT 200
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C+ + +++ ++M + I P+ + L+ +++ V +L M
Sbjct: 201 SIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 260
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I V +++ + +LCK + EA ++D M+ RG++P++ TY L+ G + ++ A
Sbjct: 261 KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEA 320
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+F M G PD + C+ + + A+ + K W+P T +L+ G
Sbjct: 321 VKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHG 380
Query: 367 LASISKVAEANELIGLMKKR 386
L + ++ +A L M R
Sbjct: 381 LCHVGRLQDAIALFHEMVAR 400
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 135/320 (42%), Gaps = 9/320 (2%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANM 126
P S +D +++K+ + ++S ++ P++ + +I++ + N
Sbjct: 53 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNV------YTLNILINSFCHLNR 106
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A ++ K G + L+ G + E +F + G +PN TY
Sbjct: 107 VGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID-EGFQPNVVTYG 165
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G++S+ +L M + + +P+ + ++ K+ + + + M
Sbjct: 166 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 225
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI+ + Y + +LC L + LL+ M++ I P++ + ++ KEG + A
Sbjct: 226 GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEA 285
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ M G EPD + C E + A+KV + KG+ P + +L+ G
Sbjct: 286 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 345
Query: 367 LASISKVAEANELIGLMKKR 386
I K+ +A L M ++
Sbjct: 346 YCKIHKIDKAMYLFEEMCRK 365
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+EP+ TY ++ C + + M RK P+ + L+ G+ K HK +
Sbjct: 296 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKA 355
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + M + YN + LC + R ++A AL M++RG P+L TY L+
Sbjct: 356 MYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 415
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K +LE A L ++ PD + + +C+ GE E A + +KG P
Sbjct: 416 LCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPS 475
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T ++ GL + EAN+L
Sbjct: 476 VWTYNIMIHGLCKRGLLNEANKL 498
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 2/219 (0%)
Query: 164 EVKRIFTEFPKVYG--IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+V F F ++ G I P+ TY ++ + C + V ++L +M I P+ F
Sbjct: 211 QVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFS 270
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
++ KE K + +++ MM + G+ V Y + C +EA + D M+ +
Sbjct: 271 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 330
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G P++ +Y LI+G+ K ++ A LF M PD+ + + LC G + A
Sbjct: 331 GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDA 390
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + +A+G +P T L+ L + EA L+
Sbjct: 391 IALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALL 429
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 142/347 (40%), Gaps = 16/347 (4%)
Query: 45 TIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEEL--- 101
++ + + + F + G ++P D ++ V L + ++ LL ++
Sbjct: 205 SLCKDRQVTEAFNLFSQMVGQGISP----DIFTYTSLVHALCNLCEWKHVTTLLNQMVNS 260
Query: 102 KTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
K PD+ + S V+ + + A + + M + G+ V L+ G L
Sbjct: 261 KILPDVV------IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQ 314
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+E ++F + G P+ +Y +I +C+ + EM RK P+
Sbjct: 315 SEMDEAVKVFDMMVR-KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 373
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G + +D + M G + Y+I + SLCK EEA ALL +
Sbjct: 374 YNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIE 433
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ + P++ Y +I G + G LE A+ LF+++++ G P + + + + LC+ G
Sbjct: 434 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 493
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A K+ P T ++ G ++ A +L+ M R
Sbjct: 494 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 540
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/257 (18%), Positives = 104/257 (40%), Gaps = 13/257 (5%)
Query: 49 LKSESN-PFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR--- 104
L+SE + ++ D+ AP D ++++ ++ + + + L EE+ +
Sbjct: 313 LQSEMDEAVKVFDMMVRKGFAP----DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI 368
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PD + +H + G+ + A+ F EM G + + LL + + EE
Sbjct: 369 PDTKTYNTL-MHGLCHVGR---LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEE 424
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
+ + + P+ + YN +I C +G+ + + + + K + P+ + +++
Sbjct: 425 AMALLKAI-EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G K + K+ M+ + YN + + + A LL+ ML+RG
Sbjct: 484 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 543
Query: 285 PNLDTYKHLIHGFGKEG 301
++ T L+ +G
Sbjct: 544 ADVSTTTLLVEMLSDDG 560
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 142/342 (41%), Gaps = 42/342 (12%)
Query: 75 RMAFSIAVSK-----LSQANHFNAISQLLEEL-KTRPDLRQNERFHVHSIVLYGQANMID 128
R SI V K LS+ F A+ L+EE+ K P L + E F V + + A+M+
Sbjct: 143 RYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVV-LVQRFASADMVK 201
Query: 129 HAMQTFEEMDKYGLRQS-------VDAL---------------------------NALLL 154
A++ +EM +GL +DAL +LL
Sbjct: 202 KAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRLRFPVNLRYFTSLLY 261
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
G + E K + + K G EP+ Y ++ + +G + Y +L +MRR+
Sbjct: 262 GWCREEKMMEAKYVLVQM-KEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFE 320
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PNAT + +L+ K + E+ KV ME+ + V Y + CK + ++ +
Sbjct: 321 PNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLV 380
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
LD M+ +G+ P+ TY H++ K+ L +L M PD + + C+
Sbjct: 381 LDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACK 440
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
GE + A+++ G P T ++ GL S + EA
Sbjct: 441 LGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEA 482
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A + A ++M + G + L+ EE ++F E + Y E
Sbjct: 298 YANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMER-YECEA 356
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY ++ FC+ G Y +L +M +K + P+ + ++A K+ K + +++
Sbjct: 357 DVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELM 416
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ + +YN+ I+ CKL +EA L + M G+ P DT+ +I+G +
Sbjct: 417 EKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQ 476
Query: 301 GNLEGAKKLFASMTNGG 317
G L A F M G
Sbjct: 477 GCLLEACDHFKEMVARG 493
>gi|357124808|ref|XP_003564089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Brachypodium distachyon]
Length = 502
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 147/325 (45%), Gaps = 7/325 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELK-TRPDLRQNERFHVHSIVL--YGQANMIDHAMQT 133
A ++ + +L + + +S L+ +L+ R V++I++ Y + + A +
Sbjct: 151 ALAVCLDRLVSSRCPDVLSDLIADLRDPRNKYLPTPNTCVYNILIKHYVKNGDSETAFRV 210
Query: 134 FEEMDKY---GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+EM +Y +R ++ + L+ G + +E +F E + I P+ TYN +I
Sbjct: 211 LDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQLTYNVIIN 270
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC G +I MR+ PNA ++ L+ G ++ + E++ V + M+ G+
Sbjct: 271 GFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEEMKSAGVEP 330
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I LC+ +E L+ M +G K ++ TY LI G K+ + A L
Sbjct: 331 DAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKRMVEAMDLL 390
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
S+ G + + + + LC G+ E A+ + + +G++PH++ L+ GL +
Sbjct: 391 RSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFLPHYAASNDLLIGLCGV 450
Query: 371 SKVAEAN-ELIGLMKKRFPKSGDMW 394
+VA+A L GL F W
Sbjct: 451 GRVADATVALYGLASVGFKPDTSCW 475
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 126/301 (41%), Gaps = 10/301 (3%)
Query: 56 FRILD----ICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNE 111
FR+LD CG + P + + +S + L +A +L EE+ + + ++
Sbjct: 208 FRVLDEMREYTCG-DVRP----NLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQ 262
Query: 112 RFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+ I + + +D A F M K + L+ G E ++ +F E
Sbjct: 263 LTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEE 322
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G+EP++ +Y +I C G ++ EMR K + + + LL+ G K+
Sbjct: 323 M-KSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDK 381
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + +L+ + G+ V Y I + SLC E+A LL ML RG P+
Sbjct: 382 RMVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGRGFLPHYAASN 441
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ G G + A + + G +PD+ C+ +C+ + ++++ + +
Sbjct: 442 DLLIGLCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCRDRKLRRSVELLDVLITE 501
Query: 352 G 352
G
Sbjct: 502 G 502
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 129/313 (41%), Gaps = 5/313 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ V L + + +L+EE+ R + N + + + +D A+
Sbjct: 73 DNTTLTVVVQSLCLGDRVDDARELVEEMLHR-GMAANAITYSALVDGLCKCERLDEAVAL 131
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
E M + G +V N+++ G ++ +E F E G P+ TY +I FC
Sbjct: 132 VETMAERGCAPTVVTYNSIITGFCRARRVDEAHG-FMEQMVAEGCHPDIITYTALIGGFC 190
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S D +L E+ R+ P+ + ++ G K + D + + E+ A
Sbjct: 191 KSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA---VDIFEEMSCAPTAI 247
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN I C+ +EA LL M+ P++ TY L+ F K G L+ A +LF M
Sbjct: 248 TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQM 307
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
PD F LC G E AL++ +G P T +V G ++V
Sbjct: 308 VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQV 367
Query: 374 AEANELIGLMKKR 386
+A EL+ + R
Sbjct: 368 RKAEELVADFRSR 380
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 126/308 (40%), Gaps = 19/308 (6%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG-------QANMID 128
+ +S V L + + L+E + ER ++V Y +A +D
Sbjct: 110 ITYSALVDGLCKCERLDEAVALVETMA--------ERGCAPTVVTYNSIITGFCRARRVD 161
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A E+M G + AL+ G S++ + E + G P+ TY+ V
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTR-RGFTPDIVTYSTV 220
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C++G I EM S P A + L+ G+ + ++ ++L M
Sbjct: 221 IDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKC 277
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A V Y + + CK+ R ++A L M++ + P++ T+ L+ G EG +E A +
Sbjct: 278 APDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE 337
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L +T GC P Y + C+ + A ++ ++G+VP+ T LV G
Sbjct: 338 LLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCC 397
Query: 369 SISKVAEA 376
+ +A
Sbjct: 398 RAGRTDQA 405
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 139/319 (43%), Gaps = 17/319 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMID 128
D + ++ + ++ +LL E+ R PD+ +S V+ G +A +
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIV------TYSTVIDGLCKAGRLR 231
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ FEEM + N+L+ G + + +E R+ + P+ TY +
Sbjct: 232 DAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD-DKCAPDVVTYTTL 287
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ +FC+ G Y + +M + P+ F L+ G E + ED ++L+ + + G
Sbjct: 288 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 347
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN + CK + +A+ L+ SRG PN TY L+ G + G + A +
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 407
Query: 309 LFASM-TNGGCEPDSYCFFMFTY-FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ + GG P S + LC+ G + A++ + +G+VP +T ++V
Sbjct: 408 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 467
Query: 367 LASISKVAEANELIGLMKK 385
L + +A+EL+ M K
Sbjct: 468 LCKAHQPQQAHELLEEMIK 486
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 89/200 (44%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TY K++ ++ +L EM P+ T +++ + +D ++
Sbjct: 37 PDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAREL 96
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
++ M G+A+ Y+ + LCK +R +EA AL++ M RG P + TY +I GF +
Sbjct: 97 VEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCR 156
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
++ A M GC PD + C+ + L++ +G+ P T
Sbjct: 157 ARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVT 216
Query: 360 MKSLVTGLASISKVAEANEL 379
+++ GL ++ +A ++
Sbjct: 217 YSTVIDGLCKAGRLRDAVDI 236
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 1/209 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P + +N VI C +G + +M + P+ + L+ G K + D
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAV 59
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+VLQ M + +QSLC R ++A+ L++ ML RG+ N TY L+ G
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K L+ A L +M GC P + C+ + A +A+G P
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ G V EL+G + +R
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRR 208
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F++M L V +L+ G E+ + E + G P TYN
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR-RGCPPTIYTYN 355
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ +C++ ++A+ R + PN + +L+AG + + + + L +
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415
Query: 247 G--IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G + V +Y I + +LC+ R+++A + M+ RG P T+ ++ K +
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 475
Query: 305 GAKKLFASMTNGGCEP 320
A +L M G P
Sbjct: 476 QAHELLEEMIKYGHTP 491
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+YGI P++ TYN V+ C++G + V EM K RPNA + +L+ F K ++ E
Sbjct: 387 MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLE 446
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ V+ M + G+ +N I C+ + A L + +G DT+ LI
Sbjct: 447 EASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILI 506
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ + N++ A+K+F M + G +PD Y + + C+ + A ++KG+V
Sbjct: 507 GAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFV 566
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P +T ++ LA +V+EA +I +M +
Sbjct: 567 PSMATFGRVLNSLAMNHRVSEAVAIIHIMVR 597
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ F E L+ + N+L+ G ++ E + G P+ TYN
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE-DGCHPDIWTYN 328
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+ G+ S ++ + K P+ F ++ G+ K K + ++++ M
Sbjct: 329 IVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMY 388
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA YN + LCK +++E + M+ +G +PN TY LI F K LE A
Sbjct: 389 GIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEA 448
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M+ G PD+ F + C+ G+ + A + + KG+ T L+
Sbjct: 449 SGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGA 508
Query: 367 LASISKVAEANELIGLM 383
+S + A ++ G M
Sbjct: 509 YSSKLNMQMAEKIFGEM 525
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 37/278 (13%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
MD +G + A NA++ + + +++ +++ G+ P++ T+ IKSFC +G
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSA-GVAPDARTHTVRIKSFCITG 59
Query: 197 DSSSVYSIL-----------------------------------AEMRRKSIRPNATDFG 221
+L EM R+ + P+ F
Sbjct: 60 RPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFN 119
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L ++ + G +L + K G++ NI I+ LC+ R EEA AL++ M +
Sbjct: 120 NVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY 179
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
I P++ TY L+ G K+ ++ A + M N GC PD + + C+ + A
Sbjct: 180 -IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEA 238
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
++ + ++ KG+VP T SL+ GL + V A EL
Sbjct: 239 TELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALEL 276
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 1/229 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+Q E M YG+ N++L G + +EV F E + G PN+ TYN
Sbjct: 375 LDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEM-ILKGCRPNAITYN 433
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I++FC+ ++ M + + P+ F L+ GF + + + Q +++
Sbjct: 434 ILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEK 493
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G ++ + +NI I + + A+ + M+S+G KP+L TY+ L+ G K N++ A
Sbjct: 494 GYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRA 553
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
A M + G P F L A+ + + G VP
Sbjct: 554 YVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +I C GD + E + K ++P+ + L+ G ++
Sbjct: 249 GFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHA 308
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V+ M + G + YNI I LCK+ +A +++ + +G P++ T+ +I G
Sbjct: 309 LQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDG 368
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K L+ A +L M G PD+ + LC+ G+ + + + KG P+
Sbjct: 369 YCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 428
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T L+ I+++ EA+ +I M +
Sbjct: 429 AITYNILIENFCKINQLEEASGVIVRMSQ 457
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 3/257 (1%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
LY + D A F+EM + + V N +L + E + + K G+
Sbjct: 90 LYAHGHGYD-ARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLK-RGMS 147
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
N T N I+ CE G +++ M I P+ + L+ G K+ K ++ +
Sbjct: 148 VNKFTCNIWIRGLCEGGRLEEAVALVESMD-AYIAPDVVTYNTLMRGLCKDSKVQEAAQY 206
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M G YN I CK +EA LL + +G P+ TY LI+G
Sbjct: 207 LRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCA 266
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG++E A +LF +PD + LC+ G AL+V + G P T
Sbjct: 267 EGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT 326
Query: 360 MKSLVTGLASISKVAEA 376
++ GL + +++A
Sbjct: 327 YNIVINGLCKMGNISDA 343
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 2/252 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ E MD Y + V N L+ G +E + G P+ TYN
Sbjct: 166 LEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMN-QGCIPDDFTYN 223
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ +L + K P+ + L+ G E E ++ +
Sbjct: 224 TIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAK 283
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + VYN ++ LC+ A +++ M+ G P++ TY +I+G K GN+ A
Sbjct: 284 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDA 343
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G PD + F C+ + ++AL++ G P T S++ G
Sbjct: 344 AVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNG 403
Query: 367 LASISKVAEANE 378
L K E NE
Sbjct: 404 LCKAGKAKEVNE 415
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 1/190 (0%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+TFEEM G R + N L+ EE + + G+ P++ ++N +I
Sbjct: 415 ETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQ-DGLVPDTISFNTLIHG 473
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC +GD Y + ++ K A F +L+ + + + K+ M G
Sbjct: 474 FCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPD 533
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ Y + + CK + A L M+S+G P++ T+ +++ + A +
Sbjct: 534 LYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIH 593
Query: 312 SMTNGGCEPD 321
M G P+
Sbjct: 594 IMVRMGVVPE 603
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK-NYEEVKRIFTEFPKVYGIEPNSETY 185
+D A F+++D+ G + D N +L+G SK N + ++IF E G +P+ TY
Sbjct: 480 LDGAYLLFQKLDEKGYSATADTFN-ILIGAYSSKLNMQMAEKIFGEMIS-KGYKPDLYTY 537
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ C++ + Y LAEM K P+ FG +L H+ + ++ +M +
Sbjct: 538 RVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVR 597
Query: 246 CGIASGV 252
G+ V
Sbjct: 598 MGVVPEV 604
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 126/262 (48%), Gaps = 7/262 (2%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A + +EM GL + N +L+ ++ E +R+F E + G+ P+ +++
Sbjct: 311 ERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQ-RGVVPDLISFSS 369
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM---ME 244
++ F +G+ + +M+ + P+ + +L+ G+ + +DV L+M M
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRN---DDVSGALKMRNEMV 426
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G V YN + LC+ K ++A L M+ RG+ P+ T LIHG+ K+GN+
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A LF +MT +PD + C+ GE E A ++ +++ P + + L+
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546
Query: 365 TGLASISKVAEANELIGLMKKR 386
G S+ V+EA L MK++
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEK 568
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ +D A + +E+ K G +V LN ++ + V +E + G+ +
Sbjct: 201 KVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE-KGVYADL 259
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN ++ ++C G S + ++ M K ++P + L+ G KE YE +VL
Sbjct: 260 VTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDE 319
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G+ +N + C+ + EA+ + + ML RG+ P+L ++ ++ F + G
Sbjct: 320 MLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGE 379
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L A F M G PD+ + + C+ + ALK+ + +G V T +
Sbjct: 380 LGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNT 439
Query: 363 LVTGLASISKVAEANELIGLMKKR--FP 388
L+ GL + +A+EL M +R FP
Sbjct: 440 LLNGLCRGKMLDDADELFKEMVERGVFP 467
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 3/264 (1%)
Query: 115 VHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+++I++ Y + + + A++ EM + G V N LL G K ++ +F E
Sbjct: 401 IYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEM 460
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G+ P+ T +I +C+ G+ + S+ M +S++P+ + L+ GF K +
Sbjct: 461 VE-RGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
E ++ M I ++I I C L EA L D M +GIKP L T
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I G+ + GNL A +M + G PD + + ++ A + +G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639
Query: 353 WVPHFSTMKSLVTGLASISKVAEA 376
+P+ T +++ G + ++ EA
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEA 663
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 122/289 (42%), Gaps = 14/289 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG---QANM 126
+D + ++ ++ L + + +L +E+ R PD F+ + +++G NM
Sbjct: 432 MDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD------FYTLTTLIHGYCKDGNM 485
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
A+ FE M L+ V N L+ G E+ K ++ + I P+ +++
Sbjct: 486 T-KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS-REIFPSYISFS 543
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC G S + + EM+ K I+P ++ G+ + L M
Sbjct: 544 ILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISE 603
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ YN I S K + + A L++ M RG+ PNL TY ++ GF + G ++ A
Sbjct: 604 GVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEA 663
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ + M + G PD + + A +V + +G+VP
Sbjct: 664 EMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 712
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 8/273 (2%)
Query: 111 ERFHVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
ER V +V Y + M+D A + F+EM + G+ L L+ G N
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
+ +F E + ++P+ TYN ++ FC+ G+ + +M + I P+ F +L
Sbjct: 487 KALSLF-ETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSIL 545
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF + ++ M++ GI + N I+ + +A L+ M+S G+
Sbjct: 546 INGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGV 605
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P+ TY LI+ F KE N + A L +M G P+ + + G + A
Sbjct: 606 PPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEM 665
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
V + KG P ST SL+ G S + EA
Sbjct: 666 VLHKMIDKGINPDKSTYTSLINGYVSKDNMKEA 698
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 5/257 (1%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV--YGIEPNSETYN 186
A + F EM + G+ + + ++++ + S+N E+ R F K+ G+ P++ Y
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIV--GVFSRN-GELGRALAYFEKMKGVGLVPDTVIYT 403
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C + D S + EM + + + LL G + +D ++ + M +
Sbjct: 404 ILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ I CK +A +L + M R +KP++ TY L+ GF K G +E A
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 523
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+L+ M + P F + C G A ++ KG P T +++ G
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583
Query: 367 LASISKVAEANELIGLM 383
+++AN+ + M
Sbjct: 584 YLRAGNLSKANDFLNTM 600
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 103/266 (38%), Gaps = 71/266 (26%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA + + F+ + K G S++A NALL G I+ + ++
Sbjct: 164 YVQARKLREGSEAFQLLRKRGFCVSINACNALL-GAIVKVGWVDLAW------------- 209
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
KV + F +SG+ +VY++ +++ K+ K ++VG L
Sbjct: 210 ------KVYEDFVKSGNIVNVYTL----------------NIMVNALCKDGKLDNVGVYL 247
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
ME+ G+ + + YN + + C+ EA L+D M +G+KP L TY LI+G
Sbjct: 248 SEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALING---- 303
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
LC+ G YE A +V + G P+ +T
Sbjct: 304 -------------------------------LCKEGSYERAKRVLDEMLGVGLCPNAATF 332
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
++ V EA + M +R
Sbjct: 333 NPMLVESCRKEDVWEAERVFNEMLQR 358
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 6/292 (2%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
QL +++ T + RF + AN++D + + ++G R A N L+
Sbjct: 165 QLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSS 224
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
I +V +F + + P+ ++N VIK C G ++ M P
Sbjct: 225 LIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSP 284
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA-SGVNVYNIRIQSLCKLKRSEEAKAL 274
+ +L+ G + ++ +VL+ +++ G+ V + I CK + E+A A+
Sbjct: 285 DTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 344
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ M++ GI PN TY LI+G+GK G+L A +++ MT C PD F C+
Sbjct: 345 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 404
Query: 335 GGEYETALKVCRASMAKGWV-PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G+ + AL++ + MA+ + P+ T ++ S+ K ++E IGL+ +
Sbjct: 405 CGQLDDALRI-WSDMAQHRIQPNVYTFSIII---HSLCKQNRSDEAIGLLNE 452
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 2/264 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +I V L + N + ++L L+ N I Y +A ++ AM
Sbjct: 285 DTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 344
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ +M G+ + N L+ G + ++ + ++ P+ T++ +I +C
Sbjct: 345 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR-CPPDVVTFSSLIDGYC 403
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED-VGKVLQMMEKCGIASGV 252
G I ++M + I+PN F +++ K+++ ++ +G + ++ + IA
Sbjct: 404 RCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQA 463
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+YN I LCK + +EA + GM +G +P+ TY LI G+ + + A F
Sbjct: 464 FIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHE 523
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGG 336
M GC PDS F L + G
Sbjct: 524 MVEAGCSPDSITVNCFISCLLKAG 547
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 17/318 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYG--QANMID 128
D +F++ + + + +L+E E PD H+I++ G + N +
Sbjct: 250 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTV------THNILVDGLCRTNEVS 303
Query: 129 HAMQTFEEMDKYGL-RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ + + G+ +V +++ G + E+ ++ + GI PN+ TYN
Sbjct: 304 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDM-VASGIMPNTVTYNV 362
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I + + GD S + +M R P+ F L+ G+ + + +D ++ M +
Sbjct: 363 LINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHR 422
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I V ++I I SLCK RS+EA LL+ + L I P Y +I K G ++ A
Sbjct: 423 IQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA 482
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M GC PD Y + + C A+ + G P T+ ++
Sbjct: 483 NLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISC 542
Query: 367 LASISKVAEANELIGLMK 384
L K NE+ +M+
Sbjct: 543 LL---KAGMPNEVDHVMR 557
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 124/279 (44%), Gaps = 5/279 (1%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L ++D A++ + + + + N +LL ++ V+R+F P
Sbjct: 142 LLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPA----- 196
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN T+N VI C+ G+ ++ M+ P+ + L+ G+ K + E+V +
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M K G A+ V YN I K E+A + M G+ N+ T + F K
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCK 316
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG + A KLFA M G P+ + + C+ G + A+ + + +G VP+ T
Sbjct: 317 EGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 376
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+V GL KVA A++++ LM++ K+ ++ L
Sbjct: 377 YTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTL 415
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 1/287 (0%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
A++ + L R ++ NE + I + + A+ EM G+ V L
Sbjct: 391 AVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTL 450
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G + +E K + + G+ PN+ Y ++ +F ++G S ++L ++
Sbjct: 451 IWGLCKVQKLDEAKSLLHKMDDC-GLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSG 509
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
++PN + L+ G K + M + G+ V VY I CK+ +A
Sbjct: 510 LQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAV 569
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L++ M+ +G+ + Y LI G K+G+L+GA L A M G + D YC+ F
Sbjct: 570 HLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGF 629
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
C + A V + G P + L+ + + EA+ L
Sbjct: 630 CNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL 676
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 5/252 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ A F EM + G+ +V L+ + E ++F + +V G+ PN TY
Sbjct: 285 IEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM-RVRGMMPNEFTYT 343
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G +L EM + + PN + +++ G KE K VL +ME+
Sbjct: 344 SLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERA 403
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + +Y I K SE A LL+ M ++G++ ++ Y LI G K L+ A
Sbjct: 404 GVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEA 463
Query: 307 KKLFASMTNGGCEPDS--YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
K L M + G P++ Y M +F + G+ A+ + G P+ T +L+
Sbjct: 464 KSLLHKMDDCGLRPNTVIYTTIMDAFF--KAGKESEAVALLHKIPDSGLQPNVVTYCALI 521
Query: 365 TGLASISKVAEA 376
GL + EA
Sbjct: 522 DGLCKAGSIYEA 533
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M G V N+L+ G EEV+ + +E K G + TYN +I F
Sbjct: 222 FVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRK-SGCAADVVTYNALINCFS 280
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G YS EM+R + N + F KE + K+ M G+
Sbjct: 281 KFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEF 340
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + CK R ++A LLD M+ +G+ PN+ TY ++ G KEG + A + + M
Sbjct: 341 TYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLM 400
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G + + + + E AL + KG S +L+ GL + K+
Sbjct: 401 ERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKL 460
Query: 374 AEANELI 380
EA L+
Sbjct: 461 DEAKSLL 467
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 7/272 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY-EEVKRIFTEFPKVYGIE 179
YG+ ++ EM K G V NAL+ C + E+ F E ++ G+
Sbjct: 244 YGKCGELEEVELLVSEMRKSGCAADVVTYNALI-NCFSKFGWIEKAYSYFGEMKRL-GVM 301
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
N T + + +FC+ G + A+MR + + PN + L+ G K + +D +
Sbjct: 302 ANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVL 361
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M G+ V Y + + LCK + A +L M G+K N Y LIHG
Sbjct: 362 LDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFM 421
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
N E A L M N G E D + + LC+ + + A + G P+
Sbjct: 422 NKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVI 481
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
+++ K +EA L+ + P SG
Sbjct: 482 YTTIMDAFFKAGKESEAVALL----HKIPDSG 509
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 1/158 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A I A+ F++M + GL +V L+ G + + + E G+ +
Sbjct: 526 KAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVD-KGMSLDK 584
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I + GD +++ A+M ++ + + ++GF + ++ VL
Sbjct: 585 VVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSE 644
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
M GI YN I+ KL EEA +L + M S
Sbjct: 645 MIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMES 682
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 4/239 (1%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCIL-SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F K GL+ V + ++LL C+ +K ++V + G+EP++ +YN V+K+
Sbjct: 142 FGRFLKTGLKMDV-IVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTL 200
Query: 193 CESGDSSSVYSILAEMRRKS--IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
CE S +L M +KS PN + ++ G ++E + + M + G+
Sbjct: 201 CEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVP 260
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I +LCK + ++A+ +L M+S G +PN TY +IHG+ G + +F
Sbjct: 261 DVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMF 320
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
MT+ G P+ + LC+ G+ + A + + AKG P+ T L+ G A+
Sbjct: 321 REMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYAT 379
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 2/258 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A +M G + + N ++ G +S ++E +F E G+ PN
Sbjct: 274 KARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTS-QGLMPNI 332
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T N + S C+ G S M K +PN + +LL G+ E + D+ +
Sbjct: 333 VTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNS 392
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
ME GI + V+NI I + K +E + M +G+ P+ TY +I F + G
Sbjct: 393 MEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGR 452
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-PHFSTMK 361
L A F M G +P+ + C G A ++ M++G P+
Sbjct: 453 LADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFN 512
Query: 362 SLVTGLASISKVAEANEL 379
S++ L +V EA+++
Sbjct: 513 SIINSLCKEGRVVEAHDI 530
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 109/262 (41%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + + + AM F +M GL+ ++L+ G + N + K + +E
Sbjct: 444 IAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGI 503
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
PN +N +I S C+ G + I + RP+ F L+ G+ K E
Sbjct: 504 PRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAF 563
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
VL M GI V YN I C+ R ++ L MLS+G+KP TY ++HG
Sbjct: 564 GVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGL 623
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+G GAKK+ M G D + LC+ + A+ + + A +
Sbjct: 624 FNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNI 683
Query: 358 STMKSLVTGLASISKVAEANEL 379
+ + +++ + + K EA EL
Sbjct: 684 AIINTMIDAMYKVRKREEAKEL 705
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 112/281 (39%), Gaps = 36/281 (12%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
+L+ E+ +R R N F I + + A F+ + G R V N+L+ G
Sbjct: 493 ELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDG 552
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
L E+ + GIEP+ +YN +I +C +G + EM K ++P
Sbjct: 553 YGLVGKIEKAFGVLDAMISA-GIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKP 611
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMM---------EKCGIASG--------------- 251
+G++L G + + + K+ M CGI G
Sbjct: 612 TTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMF 671
Query: 252 -----------VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ + N I ++ K+++ EEAK L D + + G+ PN TY +I KE
Sbjct: 672 KKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKE 731
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G++E A +F+ M GC P S L + GE A
Sbjct: 732 GSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 5/246 (2%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G +V N ++ G + +F E + G+ P+ TY +I + C++
Sbjct: 222 GCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQ-QGVVPDVVTYTSIIDALCKARAMDK 280
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+L +M +PN + ++ G+ ++++ + + M G+ + N +
Sbjct: 281 AELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMS 340
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
SLCK +S+EA D M ++G KPNL TY L+HG+ EG LF SM G
Sbjct: 341 SLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVA 400
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA---- 376
D F + + G + + + +G +P T ++ + + ++A+A
Sbjct: 401 DQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKF 460
Query: 377 NELIGL 382
N++I +
Sbjct: 461 NQMIAM 466
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV-GK 238
P TYN ++ C + + +++ + ++ + +LL Y + +DV
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML--SRGIKPNLDTYKHLIHG 296
+L M + G+ YN +++LC+ RS+ A LL M+ S G PN+ TY +IHG
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+EG + A LF M G PD + LC+ + A V R ++ G+ P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 357 FSTMKSLVTG 366
T ++ G
Sbjct: 297 KVTYNCMIHG 306
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ F E G++ + N+L+ G L ++ E + G P+ +TYN
Sbjct: 341 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE-EGCHPDIQTYN 399
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+ G+ S ++ + K P+ F L+ G+ K K + ++++ M +
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 459
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA YN + LCK + E M+ +G PN TY LI F + +E A
Sbjct: 460 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 519
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
K+ M+ G PD+ F Y C+ G+ E A + + KG+ T +L+
Sbjct: 520 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 577
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 34/294 (11%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE------FPKV---- 175
+I HA+Q EM + G + N ++ G N + + + P V
Sbjct: 375 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 434
Query: 176 ------------------------YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
YGI P++ TYN V+ C++G + V EM K
Sbjct: 435 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 494
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
PN + +L+ F + +K E+ KV+ M + G+ +N I C+ E A
Sbjct: 495 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L + +G DT+ LI F + N+ A+K+F M + G DSY + +
Sbjct: 555 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 614
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ + A + KG++P ST ++ L +V +A +I +M K
Sbjct: 615 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 668
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 33/298 (11%)
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+V SI Y +A + A+ FE MD + + A NA++ + + +++ +++
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111
Query: 173 PKVYGIEPNSETYNKVIKSFCES-------------------------------GDSSSV 201
G+ P+ T+ ++SFC + G +
Sbjct: 112 LAA-GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA 170
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ +M + PN F +L K + G +L + + G++ + YNI I+
Sbjct: 171 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 230
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LC+ R EA L+DGM + + P++ TY LI G K+ + A M N GC PD
Sbjct: 231 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 289
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + C+ + A ++ + ++ KG+VP T SL+ GL + V A EL
Sbjct: 290 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +I C GD + E + K I+P+ + L+ G +
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V+ M + G + YNI I LCK+ +A +++ + +G P++ T+ LI G
Sbjct: 380 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 439
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K L+ A +L M G PD+ + LC+ G+ + + + KG P+
Sbjct: 440 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 499
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T L+ +K+ EA+++I M +
Sbjct: 500 PITYNILIENFCRSNKMEEASKVIVKMSQ 528
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 2/279 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +M+ A + ++ G +L+ G + E +F E + GI+P
Sbjct: 300 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKGIKP 358
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ YN ++K C G ++ EM + P+ + +++ G K D V+
Sbjct: 359 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 418
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
G V +N I CK + + A L++ M GI P+ TY +++G K
Sbjct: 419 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + + F M GC P+ + + C+ + E A KV +G P +
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538
Query: 361 KSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAAL 398
+L+ G + A L L +K + + D +N +
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 577
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TYN +I +C+ +L + K P+ + L+ G E E
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + GI + VYN ++ LC A +++ M G P++ TY +I+G
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K GN+ A + G PD + F C+ + ++AL++ G P
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464
Query: 357 FSTMKSLVTGLASISKVAEANE 378
T S++ GL KV E NE
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNE 486
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ Y + P+ TYN +I+ C+ L M + P+ + ++ G+ K
Sbjct: 248 RAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 306
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ ++L+ G Y I LC E A L + ++GIKP++ Y L
Sbjct: 307 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 366
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ G +G + A ++ M GC PD + + LC+ G A V ++ KG+
Sbjct: 367 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 426
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLM 383
+P T +L+ G K+ A +L+ M
Sbjct: 427 LPDVFTFNTLIDGYCKRLKLDSALQLVERM 456
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 1/199 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ +TF+EM G + N L+ S EE ++ + + G+ P++
Sbjct: 477 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ-EGLHPDA 535
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
++N +I FC +GD Y + ++ K A F L+ F + K+
Sbjct: 536 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 595
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G + Y + I CK + A L M+ +G P++ T+ +I+
Sbjct: 596 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 655
Query: 303 LEGAKKLFASMTNGGCEPD 321
+ A + M G P+
Sbjct: 656 VFQAVGIIHIMVKIGVVPE 674
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 4/200 (2%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y I+++ +G M + P A + ++ ++ KV M
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G++ ++ + IR++S C R A LL + RG Y ++ G G+
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTH 168
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A++LF M + P+ F + LC+ G+ A + + +G + T +
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 228
Query: 365 TGLASISKVAEANELIGLMK 384
GL ++ EA L+ M+
Sbjct: 229 RGLCEAGRLPEAVRLVDGMR 248
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+++++ G + D N L+ N ++IF E G +S TY +I C
Sbjct: 558 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS-KGHRADSYTYRVLIDGSC 616
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ + Y L EM +K P+ + FG ++ H+ ++ +M K G+ V
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV- 675
Query: 254 VYNIRIQSLCKLKRSEEA--KALLDGMLSRG 282
+ ++ + E A K L++ ++ +G
Sbjct: 676 -----VDTILNADKKEIAAPKILVEDLMKKG 701
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 1/227 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G++ V N+L+ G L K + K IF ++ G+ P+ ++Y+ +I FC+
Sbjct: 207 GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQL-GVSPDIQSYSILINGFCKIKMMDE 265
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+L EM K I PN + L+ G K K K++ M G + Y+ +
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+LCK + + A ALL M ++GI+PN+ TY LI G + G LE A+K+F + G
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ Y + + C G ++ AL + G +P+ T + ++ L
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSL 432
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 144/323 (44%), Gaps = 18/323 (5%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAI---SQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
P P + F+ + L ++ H++ + SQ +E +P+L N ++S + Q
Sbjct: 58 PTPP--NIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLV-NCNILINS---FCQLG 111
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEE------VKRIFTEFPKVY-- 176
I A ++ K G + + LN L+ G C+ K +++ +K F K+
Sbjct: 112 HIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILE 171
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
I P+ T+ ++ FC+ G ++LA M + I+P + L+ G++ +
Sbjct: 172 NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKA 231
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M + G++ + Y+I I CK+K +EA LL M + I PN+ TY LI G
Sbjct: 232 KSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDG 291
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G + A KL M + G P+ + LC+ + + A+ + +G P+
Sbjct: 292 LCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPN 351
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T L+ GL K+ +A ++
Sbjct: 352 MYTYTILIKGLCQSGKLEDARKV 374
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 140/309 (45%), Gaps = 30/309 (9%)
Query: 95 SQLLEELKTRPDLRQNERF-------HVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVD 147
++LL++ T P++ N+ H H+++ Q +M+ G++ ++
Sbjct: 51 NRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQ------------KMEFRGIKPNLV 98
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
N L+ + + T+ K+ G +PN+ T N +IK C +G + I+ +
Sbjct: 99 NCNILINSFCQLGHIPSAFSVLTKILKM-GYKPNTITLNTLIKGLCLNGKIHDKHCIVGK 157
Query: 208 MRR----------KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
++ ++I P+ F +L+ GF KE + ++ VL MM GI GV YN
Sbjct: 158 LKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNS 217
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ +K+ +AK++ + M G+ P++ +Y LI+GF K ++ A +L M +
Sbjct: 218 LMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P+ + LC+ G+ ALK+ +G P+ T S++ L +V A
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAI 337
Query: 378 ELIGLMKKR 386
L+ MK +
Sbjct: 338 ALLTQMKNQ 346
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 1/255 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F +M + V L+ G +E K + + GI+P TYN ++
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMM-MIQGIKPGVVTYNSLM 219
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ + SI M + + P+ + +L+ GF K ++ ++L+ M I
Sbjct: 220 DGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y+ I LCK + A L+D M RG PN+ TY ++ K ++ A L
Sbjct: 280 PNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIAL 339
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M N G +P+ Y + + LCQ G+ E A KV + KG + T ++ G
Sbjct: 340 LTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCD 399
Query: 370 ISKVAEANELIGLMK 384
EA L+ M+
Sbjct: 400 KGLFDEALTLLSKME 414
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 106/231 (45%), Gaps = 9/231 (3%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGL 142
+ Q N +I + +L PD++ +SI++ G + M+D AM+ +EM +
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQS------YSILINGFCKIKMMDEAMELLKEMHHKQI 278
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+V ++L+ G S ++ E G PN TY+ ++ + C++ +
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHD-RGQPPNIVTYSSILDALCKNHQVDNAI 337
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
++L +M+ + I+PN + +L+ G + K ED KV + + G V Y + IQ
Sbjct: 338 ALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGF 397
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
C +EA LL M G PN TY+ +I K+ E A+KL M
Sbjct: 398 CDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 93/239 (38%), Gaps = 10/239 (4%)
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+L + V + F F + N Y +F + D S+ + +++ P
Sbjct: 2 LLRYGFVPVSKKFHSFQFLINTHFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPP 61
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+F +L K Y V + Q ME GI + NI I S C+L A ++L
Sbjct: 62 NIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLT 121
Query: 277 GMLSRGIKPNLDTYKHLIHGF---GK-------EGNLEGAKKLFASMTNGGCEPDSYCFF 326
+L G KPN T LI G GK G L+ A LF M PD Y F
Sbjct: 122 KILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFT 181
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ C+ G + A V M +G P T SL+ G + +V +A + M +
Sbjct: 182 ILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQ 240
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI ++ + + +LL+E+ + + N + I ++ I +A++
Sbjct: 246 DIQSYSILINGFCKIKMMDEAMELLKEMHHK-QIIPNVVTYSSLIDGLCKSGKISYALKL 304
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EM G ++ +++L + + + T+ K GI+PN TY +IK C
Sbjct: 305 VDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM-KNQGIQPNMYTYTILIKGLC 363
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG + ++ K N + +++ GF + +++ +L ME G
Sbjct: 364 QSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAK 423
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGML 279
Y I I SL K +E A+ LL M+
Sbjct: 424 TYEIIILSLFKKDENEMAEKLLCEMI 449
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 44/291 (15%)
Query: 98 LEELKTRPDLRQNERFHVHS--IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
L L PD+ HV S +++Y M A+Q FE M G R + A LL
Sbjct: 119 LVRLHDDPDINS----HVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNS 174
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+ + V +++ + ++ G+E N YN +I + C+SGD ++L+EM K + P
Sbjct: 175 LAKDRLTDMVWKVYKKMARI-GVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFP 233
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ + YN I CK EA ++
Sbjct: 234 D-----------------------------------LFTYNTLISLYCKKGMHYEALSVQ 258
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
D M GIKP++ TY LIHGF KEG + A +LF + + +Y + Y C+
Sbjct: 259 DRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNHVTYTTLIDGY--CRL 316
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + AL++ A+G P T S++ L I ++ +AN+L+ M ++
Sbjct: 317 NDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEK 367
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 138/315 (43%), Gaps = 14/315 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIV-LYGQANMIDHAMQ 132
+++ + ++ LL E++++ PDL F ++++ LY + M A+
Sbjct: 202 VYNVLIHACCKSGDVEKADNLLSEMESKCVFPDL-----FTYNTLISLYCKKGMHYEALS 256
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+ M++ G++ + N+L+ G E R+F E + PN TY +I +
Sbjct: 257 VQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKE---IRDATPNHVTYTTLIDGY 313
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C D + EM + + P + +L + + D K+L M + I
Sbjct: 314 CRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDN 373
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
N I + CK+ + A + + M+ G+K + TYK LIHGF K ++GAK+L S
Sbjct: 374 VTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLS 433
Query: 313 MTNGGCEPDSYCFFMFTYF-LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G P SYC + + C E LK+ + KG S ++L+
Sbjct: 434 MLDAGFSP-SYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKRE 492
Query: 372 KVAEANELIGLMKKR 386
+V A ++ LM+++
Sbjct: 493 QVDYAKKIFSLMQEK 507
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 2/194 (1%)
Query: 197 DSSSVYSILAEMRRKSIRP--NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
D S S+L+ + R P N+ F L+ + ++ +V + M G ++
Sbjct: 108 DFLSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHA 167
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+ + SL K + ++ + M G++ N+ Y LIH K G++E A L + M
Sbjct: 168 CTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEME 227
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
+ PD + + C+ G + AL V +G P T SL+ G ++
Sbjct: 228 SKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMR 287
Query: 375 EANELIGLMKKRFP 388
EA L ++ P
Sbjct: 288 EAMRLFKEIRDATP 301
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 56/127 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY+ ++ +C + +V + E RK + + + + L+ F K + +
Sbjct: 438 GFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYA 497
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ +M++ G +Y + KL ++ A LLD M R + L Y+ L
Sbjct: 498 KKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLLDEMYKRRLMITLKIYRALNAS 557
Query: 297 FGKEGNL 303
+ + ++
Sbjct: 558 YAGDNSI 564
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 36/280 (12%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
R V+ N L+ G L++ EE + E + +G+ P+ +T+N V+ C+SG +
Sbjct: 150 FRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKE----------------------HKY------ 233
+RR S+ +A F +L+ G K H Y
Sbjct: 210 MDHFEAVRR-SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNW 268
Query: 234 ----EDVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ + + + +MEK G + YN + LCK+ R EEA LL ++ G P+
Sbjct: 269 LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 328
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ TY LI G GKE A KLF M + G D+ C+ L Q G+ A V +
Sbjct: 329 VVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYK 388
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G VP T+ +++ GL+ ++ A + M+ R
Sbjct: 389 TMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 428
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 110/276 (39%), Gaps = 8/276 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q I A ++ M +G V L+ ++ G + RIF + G+ PN
Sbjct: 376 QTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNE 434
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y+ +I C++ +LA+M++ P+ + +L+ G K E
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G V YNI I LCK ++ A +LD M S Y L+ G K G
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGK 549
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
LEG LF M G +S + LC+ + A+ + A +G +PH S
Sbjct: 550 LEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNS 607
Query: 363 LVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+++ L KV E + M + + +NA L
Sbjct: 608 IISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALL 643
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ ++ G V +L+ G K E ++F E G+ ++ Y
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAS-RGLALDTVCYT 368
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ ++G S+ M P+ ++ G K + ++ + ME
Sbjct: 369 ALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 428
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+A VY+ I LCK ++ + A +L M P+ TY LI G K G++E A
Sbjct: 429 GLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAA 488
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
+ F M GC+PD Y + + LC+ G + A V
Sbjct: 489 RAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGV 526
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G + + T N ++ F + ++L RP+ + +L+ G+ + E+
Sbjct: 113 FGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEE 172
Query: 236 VGKVLQMMEK-CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM--LSRGIKPNLDTYKH 292
V++ ME+ G+A + +N+ + LCK S + A +D + R + + T+
Sbjct: 173 AFAVIREMEEDFGVAPSLKTHNLVLHGLCK---SGKVLAAMDHFEAVRRSMPVSAATFSI 229
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI+G K G + A L T GC D + + +L + + + A+ + A G
Sbjct: 230 LINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG 289
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELI 380
P +T +L+ GL + ++ EA +L+
Sbjct: 290 CTPTIATYNALLNGLCKMGRLEEAIDLL 317
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 45/282 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + S + LS+A A ++ + ++ R L NE V+S +++G +A +D A+
Sbjct: 398 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR-GLAPNEV--VYSALIHGLCKARKMDCAL 454
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +M K N L+ G S + E + F E + G +P+ TYN +I
Sbjct: 455 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA-GCKPDVYTYNILISG 513
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C++G++ + +L +M + L+ G K K E + ME+ G+A+
Sbjct: 514 LCKAGNTDAACGVLDDMSSSRFV-----YSSLVDGLCKSGKLEGGCMLFHEMERSGVANS 568
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGM--------------------------------- 278
+ I LCK R +EA +L + +
Sbjct: 569 QTRTRL-IFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQE 627
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
++R KP+ TY L++G ++ A + MT G P
Sbjct: 628 MTRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F + K+GLR SV + N L+ G I + +E R+ + G++P+ TY+ +I
Sbjct: 155 AQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAM-HASGVQPDVYTYSVLI 213
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ + EM K + PN F L+AG K + + ++ + M ++
Sbjct: 214 NGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLS 273
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I LCK ++A L+D M +G+KP+ TY LI G KEG+LE A +
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEH 333
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M D + LCQ G Y A KV R ++ G P T ++
Sbjct: 334 RKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCK 393
Query: 370 ISKVAEANELIGLMKK 385
V ++L+ M++
Sbjct: 394 KGDVWTGSKLLKEMQR 409
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N ++ FC+ GD + + + +RP+ F L+ G+ + ++ ++ M
Sbjct: 139 FNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ V Y++ I LCK + ++A L D ML +G+ PN T+ LI G K ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVD 258
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +++ M + PD + Y LC+ G+ + A + KG P T +L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318
Query: 365 TG 366
G
Sbjct: 319 DG 320
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 103 TRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
+PD+ + +S+++ G + + +D A F+EM GL + L+ G ++
Sbjct: 202 VQPDV------YTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNR 255
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+ I+ + + P+ TYN +I C+ GD + ++ EM K ++P+ +
Sbjct: 256 RVDLAMEIYKQMLS-QSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 314
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ G KE E + + M + I Y I LC+ R +A+ +L MLS
Sbjct: 315 TTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLS 374
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
G+KP+ TY +I+ F K+G++ KL M G P
Sbjct: 375 VGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 414
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ F KE V + K G+ V +N + +L +E L M
Sbjct: 139 FNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G++P++ TY LI+G KE ++ A LF M + G P+ F C+ +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVD 258
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
A+++ + +++ P T +L+ GL + +A++LI M
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 6/240 (2%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDL 107
RL FR+ + + P D +S+ ++ L + + + + L +E+ + L
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQP----DVYTYSVLINGLCKESKMDDANGLFDEMLDK-GL 237
Query: 108 RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
N I + + +D AM+ +++M L + N L+ G + ++
Sbjct: 238 VPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHD 297
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E + G++P+ TY +I C+ GD + + M +++IR + + L++G
Sbjct: 298 LIDEM-SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 356
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+E +Y D KVL+ M G+ Y + I CK LL M G P++
Sbjct: 357 CQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 416
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ GFY+E + CG + + +NI + CK A+ + + + G
Sbjct: 119 LVWGFYEE------------ILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWG 166
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
++P++ ++ L++G+ + G+L+ +L ++M G +PD Y + + LC+ + + A
Sbjct: 167 LRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + KG VP+ T +L+ G +V A E+
Sbjct: 227 GLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEI 263
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 1/197 (0%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+V+ S G +S+V++ + E + + R + F L+ + + D + ++ +
Sbjct: 37 RVVVSRKGKGSASAVFAAILETK-GTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREH 95
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ ++ L KLK + + +L G +L + L+H F KEG++ A
Sbjct: 96 KFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVA 155
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F ++T G P F + G+ + ++ A A G P T L+ G
Sbjct: 156 QLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLING 215
Query: 367 LASISKVAEANELIGLM 383
L SK+ +AN L M
Sbjct: 216 LCKESKMDDANGLFDEM 232
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EMD G+R V ++L+ + + R+ ++ + I PN T+N
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE-RKINPNVVTFN 314
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +F + G + EM ++SI PN + L+ GF + ++ ++ +M
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I CK K+ + L M RG+ N TY LIHGF + + + A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F M + G P+ + LC+ G+ E A+ V P T + G
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 367 LASISKVAEANEL 379
+ KV + +L
Sbjct: 495 MCKAGKVEDGWDL 507
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 109/266 (40%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ N I A+ ++M + G + L+ G + N E V G +P
Sbjct: 145 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG-LFQHNKASEAVALVERMVVKGCQP 203
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY VI C+ G+ ++L +M + I + + ++ K +D +
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ GI V Y+ I LC R +A LL ML R I PN+ T+ LI F KE
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G L A+KLF M +P+ + C + A ++ ++K +P T
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G KV + EL M +R
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRR 409
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 10/323 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHA 130
D + +S + L + H + L E+ RPD+ + + YG+ + A
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL-ISCLCNYGRWS---DA 294
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +M + + +V N+L+ E +++F E + I+PN TYN +I
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVTYNSLIN 353
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC I M K P+ + L+ GF K K D ++ + M + G+
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVG 413
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
Y I + + A+ + M+S G+ PN+ TY L+ G K G LE A +F
Sbjct: 414 NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF 473
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ EPD Y + + + +C+ G+ E + + KG P ++++G
Sbjct: 474 EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK 533
Query: 371 SKVAEANELIGLMKKR--FPKSG 391
EA L MK+ P SG
Sbjct: 534 GLKEEAYTLFIKMKEDGPLPDSG 556
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 8/306 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + F+ V L Q N + L+E + + PDL ++ + G+ D A
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV-INGLCKRGEP---DLA 224
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +M+K + V + ++ ++ ++ +FTE GI P+ TY+ +I
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN-KGIRPDVFTYSSLIS 283
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C G S +L++M + I PN F L+ F KE K + K+ M + I
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN I C R +EA+ + M+S+ P++ TY LI+GF K + +LF
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M+ G ++ + + Q + + A V + ++ G P+ T +L+ GL
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 371 SKVAEA 376
K+ +A
Sbjct: 464 GKLEKA 469
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 5/320 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +S +S L ++ S+LL ++ R + N I + + + A +
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERK-INPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM + + ++ N+L+ G + +E ++IFT + P+ TYN +I FC
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLINGFC 391
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ + +M R+ + N + L+ GF++ ++ V + M G+ +
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + LCK + E+A + + + ++P++ TY + G K G +E LF S+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G +PD + C+ G E A + G +P T +L+
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Query: 374 AEANELIGLMKK-RFPKSGD 392
A + ELI M+ RF +GD
Sbjct: 572 AASAELIKEMRSCRF--AGD 589
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EM K S+ + LL K ++ V F E ++ G+ N TYN
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYN 104
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C S +IL +M + P+ LL GF ++ + ++ M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + L + ++ EA AL++ M+ +G +P+L TY +I+G K G + A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G E D + LC+ + AL + KG P T SL++
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 367 LASISKVAEANELIGLMKKR 386
L + + ++A+ L+ M +R
Sbjct: 285 LCNYGRWSDASRLLSDMLER 304
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ T N ++ FC S +++ +M +P+ F L+ G ++ +K +
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M G + Y I LCK + A LL+ M I+ ++ Y +I
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K +++ A LF M N G PD + + LC G + A ++ + + P+
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ A K+ EA +L M +R
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 1/215 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A + M+ F +M + GL + L+ G + + + + +F + G+ P
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS-DGVHP 448
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN ++ C++G + +++ + P+ + ++ G K K ED +
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V YN I CK EEA L M G P+ TY LI ++
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
G+ + +L M + D+ + + T L G
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 369
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN------YEEVKRIFTEFPKVYG 177
+N I A+ +M+K G+++ V ++ +L+ L KN E +KR+ K G
Sbjct: 26 SNSIKDAVYVAGQMEKMGIKRDV-VVDTILIDT-LCKNRLVVPALEVLKRM-----KDRG 78
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN TY+ +I C+SG + L EM K I PN F L+ + K K V
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V +MM + I V Y+ I LC R +EA +LD M+S+G PN+ TY L +GF
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K ++ KL M G ++ Q G+ + AL V + G +P+
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 358 STMKSLVTGLASISKVAEA 376
+ ++ GL + +V +A
Sbjct: 259 RSYNIVLAGLFANGEVEKA 277
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GIEP+ T + ++ FC S + +M + I+ + +L+ K
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL+ M+ GI+ V Y+ I LCK R +A+ L M S+ I PN+ T+ LI
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K G L ++ M +P+ + + Y LC + A+K+ ++KG P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L G S+V + +L+ M +R
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%)
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+ +M + I P+ L+ GF + +D V MEK GI V V I I +LCK
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ A +L M RGI PN+ TY LI G K G L A++ M + P+
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
F + G+ V + + P+ T SL+ GL ++V EA +++ LM
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 113/284 (39%), Gaps = 3/284 (1%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
LE LK D + +S ++ G ++ + A + EMD + +V +AL+
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+V ++ ++ I+PN TY+ +I C +L M K P
Sbjct: 128 YAKRGKLSKVDSVYKMMIQM-SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N + L GF+K + +D K+L M + G+A+ N I+ + + + A +
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M S G+ PN+ +Y ++ G G +E A F M + D + + + +C+
Sbjct: 247 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 306
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ A + K P F ++ L EA+ L
Sbjct: 307 CMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
Length = 514
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN------YEEVKRIFTEFPKVYG 177
+N I A+ +M+K G+++ V ++ +L+ L KN E +KR+ K G
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDV-VVDTILIDT-LCKNRLVVPALEVLKRM-----KDRG 223
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN TY+ +I C+SG + L EM K I PN F L+ + K K V
Sbjct: 224 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 283
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V +MM + I V Y+ I LC R +EA +LD M+S+G PN+ TY L +GF
Sbjct: 284 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 343
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K ++ KL M G ++ Q G+ + AL V + G +P+
Sbjct: 344 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 403
Query: 358 STMKSLVTGLASISKVAEA 376
+ ++ GL + +V +A
Sbjct: 404 RSYNIVLAGLFANGEVEKA 422
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 117/283 (41%), Gaps = 9/283 (3%)
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
T D R+ R +H+I D A F M S+ N +L + Y
Sbjct: 49 TTIDYREVLRSGLHNI-------KFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMY 101
Query: 163 EEVKRIFTEFPKVYGIE--PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+ V ++ GIE P+ T N ++ FC SS S L +M + I P+
Sbjct: 102 DVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTA 161
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ GF + +D V MEK GI V V I I +LCK + A +L M
Sbjct: 162 SSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKD 221
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
RGI PN+ TY LI G K G L A++ M + P+ F + G+
Sbjct: 222 RGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSK 281
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
V + + P+ T SL+ GL ++V EA +++ LM
Sbjct: 282 VDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 324
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GIEP+ T + ++ FC S + +M + I+ + +L+ K
Sbjct: 153 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 212
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL+ M+ GI+ V Y+ I LCK R +A+ L M S+ I PN+ T+ LI
Sbjct: 213 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 272
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K G L ++ M +P+ + + Y LC + A+K+ ++KG P+
Sbjct: 273 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 332
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L G S+V + +L+ M +R
Sbjct: 333 VVTYSTLANGFFKSSRVDDGIKLLDDMPQR 362
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 113/284 (39%), Gaps = 3/284 (1%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
LE LK D + +S ++ G ++ + A + EMD + +V +AL+
Sbjct: 213 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 272
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+V ++ ++ I+PN TY+ +I C +L M K P
Sbjct: 273 YAKRGKLSKVDSVYKMMIQM-SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 331
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N + L GF+K + +D K+L M + G+A+ N I+ + + + A +
Sbjct: 332 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 391
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M S G+ PN+ +Y ++ G G +E A F M + D + + + +C+
Sbjct: 392 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 451
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ A + K P F ++ L EA+ L
Sbjct: 452 CMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 495
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 123/277 (44%), Gaps = 2/277 (0%)
Query: 111 ERFHVHSIV-LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+RF ++++ LY + M AM + MDK G+R N+L+ G +E ++F
Sbjct: 218 DRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLF 277
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
TE P++ TY +I +C +G+ + EM + P + +L +
Sbjct: 278 TEMAAAQAT-PDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCE 336
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ K ++V ++L M++ + + N I + CK A + M+ G++ N T
Sbjct: 337 DGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFT 396
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
YK LIHGF K L+ AK+ F M + G P+ F C+ + L + M
Sbjct: 397 YKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELM 456
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+G P + +SL+ L V +A ++ M+ +
Sbjct: 457 KRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSK 493
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 1/220 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+++ Q+ A++ F++M GL A ALL ++ +R+F E + G
Sbjct: 121 VLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARA-G 179
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ ++ YN ++ ++GD++ +++ M + + + ++A + K+ +
Sbjct: 180 LAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAM 239
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V M+K GI + +N I LCK R +EA L M + P+ TY LI G+
Sbjct: 240 CVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGY 299
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
+ GN+E A KL M G P + LC+ G+
Sbjct: 300 CRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGK 339
>gi|308044277|ref|NP_001183654.1| uncharacterized protein LOC100502248 [Zea mays]
gi|238013682|gb|ACR37876.1| unknown [Zea mays]
gi|414871016|tpg|DAA49573.1| TPA: hypothetical protein ZEAMMB73_384118 [Zea mays]
Length = 438
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 163/354 (46%), Gaps = 27/354 (7%)
Query: 49 LKSESNPFRILDICCGASLAPESP---LDRMAFSIAVSKLSQANHFNAISQLLEELK--T 103
+++ES+P RI + A + + P R FS+A S+L + + + LL+ L T
Sbjct: 65 VRAESDPARIHSLVASALSSHDMPRLHTSRQLFSLATSRLIRLRRADLAASLLDLLLAST 124
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
P + ++ LY D A++ F R V +L+ALL + + +
Sbjct: 125 PP----SPGLLARALSLYPGP---DDALRAFSSSPPAA-RSDV-SLSALLSAFLRAGRLD 175
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR----PNATD 219
++K T +G+ P ++N ++ + ++ + ++ +L EM K ++ P+
Sbjct: 176 DIKSTITLAESSHGVAPGRASHNVLLHALVKNSELAAARKLLDEMANKKLKHRPAPDIIS 235
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +LAG+ + ++ GK+L+ + + V YN RIQ K + + + LLD M
Sbjct: 236 YNTVLAGYSVQDDEDEFGKLLKEISLSNLEPNVVTYNCRIQWFSKKGETVKGEELLDVME 295
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM---------TNGGCEPDSYCFFMFTY 330
S+ I PN TY L+ G+ KEGN+ A ++F M ++ G S + +
Sbjct: 296 SKEIAPNYVTYNALVQGYCKEGNVGAAMRVFKRMKVMKRREGRSDLGVSAHSQVYVVLFR 355
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
L + + AL +C++ A P F +K LV GL + EA +++ M+
Sbjct: 356 SLVEKEKLNDALWICKSCFAMKAAPPFEAVKGLVEGLVKAGRSTEAKDVVAKME 409
>gi|222624458|gb|EEE58590.1| hypothetical protein OsJ_09919 [Oryza sativa Japonica Group]
Length = 465
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A NAL+ + + EV R+F P P + + +I S SG + + A
Sbjct: 53 AYNALMSAYSRAGRHGEVLRLFRSLP----FAPTAPLFTTLISSLAASGRPLAARAAFAS 108
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
+ + + P A+ F LL + V V + ME G + VYN I LC +
Sbjct: 109 LLKSGVPPTASAFTALLRS--SSDALDFVDSVFRAMEALGCSPDAAVYNWVISMLCDFQL 166
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA LD ML G +P ++ ++ + ++G A +L +M GC PD + +
Sbjct: 167 VQEALGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQNGCPPDVVSYTV 226
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ GE+ T + S ++GW+P T ++GL + + EA + +M+ R
Sbjct: 227 LIEGLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQVDIMRGR 285
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 3/245 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F + K G+ + A ALL S + V +F + G P++ YN VI
Sbjct: 102 ARAAFASLLKSGVPPTASAFTALLRSS--SDALDFVDSVFRAM-EALGCSPDAAVYNWVI 158
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ L M RP A F +L + ++ ++ D G+++ M + G
Sbjct: 159 SMLCDFQLVQEALGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQNGCP 218
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y + I+ LC++ + +L S+G P TY + G + G L+ A +
Sbjct: 219 PDVVSYTVLIEGLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQ 278
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + LC+ + A+ + S GW +L++ L
Sbjct: 279 VDIMRGRGLSVTAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMSRLCD 338
Query: 370 ISKVA 374
+ A
Sbjct: 339 VDDFA 343
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 6/271 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHF-NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
P AF+ + S A F +++ + +E L PD + I + ++ A
Sbjct: 115 PPTASAFTALLRSSSDALDFVDSVFRAMEALGCSPD----AAVYNWVISMLCDFQLVQEA 170
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + M + G R + + A+L + + R+ + G P+ +Y +I+
Sbjct: 171 LGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQ-NGCPPDVVSYTVLIE 229
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C G+ S+V IL E + P A + + ++G + ++ + + +M G++
Sbjct: 230 GLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQVDIMRGRGLSV 289
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+I LC+ EA LL+ G ++ Y L+ + KL
Sbjct: 290 TAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMSRLCDVDDFARVLKLL 349
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+ G PD + F + LC+ G+ A
Sbjct: 350 VDLLKKGIGPDKFSFTIAIRSLCRAGKLRLA 380
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 125/349 (35%), Gaps = 49/349 (14%)
Query: 22 ATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIA 81
A +SLL +G + A A L+S S+ +D A A D ++
Sbjct: 105 AFASLLKSG-------VPPTASAFTALLRSSSDALDFVDSVFRAMEALGCSPDAAVYNWV 157
Query: 82 VSKLSQANHFN-AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+S L A+ L L+ P R R + Y + A + + M +
Sbjct: 158 ISMLCDFQLVQEALGFLDHMLENGP--RPTARSFTAILRAYCEQGRFFDAGRLVDTMIQN 215
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G V + L+ G + V+ I E + G P + TYN + C G
Sbjct: 216 GCPPDVVSYTVLIEGLCRVGEFSTVEMILGE-SESQGWMPTAVTYNIYMSGLCRMGFLDE 274
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN---- 256
+ + MR + + A +L + + + +L+ E+ G V YN
Sbjct: 275 AFRQVDIMRGRGLSVTAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMS 334
Query: 257 -------------------------------IRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
I I+SLC+ + AK L++ ++GIK
Sbjct: 335 RLCDVDDFARVLKLLVDLLKKGIGPDKFSFTIAIRSLCRAGKLRLAKCLIE---NKGIKY 391
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
++ + LIHGF G+L+ ++ M N P+++ M LC+
Sbjct: 392 DVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDVIPNNFTDAMLIDSLCK 440
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 164/397 (41%), Gaps = 26/397 (6%)
Query: 7 LRTNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGAS 66
L F L V+Y L + + GD A+ + K + + E I+D C
Sbjct: 404 LAQGFQLNQVSYATL-INGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS-TIIDALCKYQ 461
Query: 67 LAPES------------PLDRMAFSIAVSKLSQANHFNAISQLLEE--LKT-RPDLRQNE 111
L E+ D + +S + LL E LKT PD+R
Sbjct: 462 LVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVR--- 518
Query: 112 RFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
++I++ G+ + A M K ++ V N L+ G +L ++ + +F
Sbjct: 519 ---TYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ G+ P+ TY +I FC+S ++ EM +K++ P+ + L+ G K
Sbjct: 576 NAM-SLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCK 634
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ V ++ M G + V YN I LCK ++A AL + M +GI+PN T
Sbjct: 635 SGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFT 694
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ L+ G K G L+ A+++F + G D Y + + Y C+ G E AL +
Sbjct: 695 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G +P+ T ++ L + +A +L+ M R
Sbjct: 755 ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A F M G+ V L+ G SK +E +F E + + P++ TY+
Sbjct: 568 VKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQ-KNMVPDTVTYS 626
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+SG S V+ ++ EMR + + + L+ G K + + M+
Sbjct: 627 SLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQ 686
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + I + LCK R ++A+ + +L++G ++ Y +I+G K+G LE A
Sbjct: 687 GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEA 746
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ + M GC P++ F + L + E + A K+ R +A+G +
Sbjct: 747 LTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 37/299 (12%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSET 184
++ A F EM G+ +V + L+ G CI+ K E + + K I PN T
Sbjct: 148 LVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT--INPNVCT 205
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN ++ + C+ G S+LA M + ++ N + L+ G++ ++ + V M
Sbjct: 206 YNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMS 265
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSR---------------------- 281
G+ V+ YNI I CK+KR ++A L M LSR
Sbjct: 266 LMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYST 325
Query: 282 -----------GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
GI+P+L T LI+ F G + + A + G P +
Sbjct: 326 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIK 385
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
LC G+ + AL +A+G+ + + +L+ G+ I A +L+ + R K
Sbjct: 386 GLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTK 444
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN E YN +I + C+ S Y + +EM K I N + L+ GF K ++
Sbjct: 130 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALG 189
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L +M I V YNI + +LCK + +EAK++L ML +K N+ TY L+ G+
Sbjct: 190 LLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYF 249
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
++ A+ +F +M+ G PD + + + C+ + AL + + + + P
Sbjct: 250 LVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 6/262 (2%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
++ ++ K G LN L+ G L +E F + G + N +Y +I
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALH-FHDKLLAQGFQLNQVSYATLI 105
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C GD+ + L ++ + +PN + ++ K + + M GI+
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ V Y+ I C + + +EA LL+ M+ + I PN+ TY L+ KEG ++ AK +
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225
Query: 310 FASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
A M + + +Y M YFL E + A V A G P + ++ G
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVY--EVKKAQHVFNAMSLMGVTPDVHSYNIMINGF 283
Query: 368 ASISKVAEANELIG-LMKKRFP 388
I +V +A L ++ RFP
Sbjct: 284 CKIKRVDKALNLFKEMILSRFP 305
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 112/281 (39%), Gaps = 35/281 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ ++D + +V+ N ++ + E +F+E V GI N TY+ +I
Sbjct: 117 AIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM-TVKGISANVVTYSTLI 175
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC G +L M K+I PN + +L+ KE K ++ VL +M K +
Sbjct: 176 YGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVK 235
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
S V Y+ + + ++A+ + + M G+ P++ +Y +I+GF K ++ A L
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNL 295
Query: 310 FASMTNG----------------------------------GCEPDSYCFFMFTYFLCQG 335
F M G +PD + + C
Sbjct: 296 FKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHM 355
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G+ V + +G+ P T+ +L+ GL +V +A
Sbjct: 356 GQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 396
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 2/208 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ T N +IK C G ++ + + N + L+ G K
Sbjct: 372 GYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGA 431
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+L+ ++ V +Y+ I +LCK + EA L M +GI ++ TY LI+G
Sbjct: 432 IKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYG 491
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-P 355
F G L+ A L M PD + + L + G+ + A K A M K V P
Sbjct: 492 FCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEA-KSVLAVMLKACVKP 550
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
T +L+ G + +V +A + M
Sbjct: 551 DVFTYNTLMNGYLLVYEVKKAQHVFNAM 578
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 100/257 (38%), Gaps = 2/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A M K ++ +V + L+ G L ++ + +F + G+ P+ +YN
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM-SLMGVTPDVHSYN 277
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ ++ EM P F +L F K Y + +E
Sbjct: 278 IMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELK 336
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + NI I C + + ++L +L RG P+ T LI G +G ++ A
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKA 396
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ G + + + +C+ G+ A+K+ R + P+ +++
Sbjct: 397 LHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDA 456
Query: 367 LASISKVAEANELIGLM 383
L V+EA L M
Sbjct: 457 LCKYQLVSEAYGLFSEM 473
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 8/201 (3%)
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ D + S+L ++ ++ P+ L+ G + + V + L +K +A G
Sbjct: 40 QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQ---VKEALHFHDKL-LAQGFQ 95
Query: 254 V----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y I +C++ + A L + R KPN++ Y +I K + A L
Sbjct: 96 LNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGL 155
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F+ MT G + + Y C G+ + AL + + K P+ T LV L
Sbjct: 156 FSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCK 215
Query: 370 ISKVAEANELIGLMKKRFPKS 390
KV EA ++ +M K KS
Sbjct: 216 EGKVKEAKSVLAVMLKACVKS 236
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 49/242 (20%)
Query: 80 IAVSKLSQANH-FNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEE 136
+ V ++ +A H FNA+S + PD+ H ++I++ G ++ M+D A+ F+E
Sbjct: 563 LLVYEVKKAQHVFNAMSLM----GVTPDV------HTYTILINGFCKSKMVDEALNLFKE 612
Query: 137 M-------DKYGLRQSVDAL----------------------------NALLLGCILSKN 161
M D VD L N+L+ G + +
Sbjct: 613 MHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH 672
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
++ +F + K GI PN+ T+ ++ C+ G + ++ K + +
Sbjct: 673 LDKAIALFNKM-KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYN 731
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+++ G K+ E+ +L ME+ G ++I I +L K +++A+ LL M++R
Sbjct: 732 VMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791
Query: 282 GI 283
G+
Sbjct: 792 GL 793
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 5/264 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ M++ A +E M ++G+ +V N +L C + + E V +I+ E K IE +
Sbjct: 252 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM-KRRNIEFSE 310
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I F ++G +MRR F L+ G+ K+ ++D V
Sbjct: 311 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 370
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M GI + YNI I +LC R ++A+ LL M + P++ +Y L+HG+ K G
Sbjct: 371 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 426
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A LF + G P + LC+ G E A ++ + P T +
Sbjct: 427 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 486
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
LV G ++ A E+ M ++
Sbjct: 487 LVKGFVKNGNLSMATEVYDEMLRK 510
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+++ + S+ N L+ G S N E +R+ E I P+ TY ++K F
Sbjct: 434 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL-IFPDVITYTTLVKGFV 492
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI----A 249
++G+ S + EM RK I+P+ + G E + D K ++ E+ A
Sbjct: 493 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG---ELRLGDSDKAFRLHEEMVATDHHA 549
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +YN+RI LCK+ +A + G+ P+ TY +I G+ + G + A+ L
Sbjct: 550 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 609
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ M P +F+ Y + G E A + +G P+ T +L+ G+
Sbjct: 610 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 669
Query: 370 ISKVAEA 376
+ EA
Sbjct: 670 AGNIDEA 676
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 131/309 (42%), Gaps = 15/309 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYG--QANMIDHAM 131
+ F+ + +A + ++ E+K R+N F ++I++ G + ++ A
Sbjct: 276 ITFNTMLDSCFKAGDLERVDKIWLEMK-----RRNIEFSEVTYNILINGFSKNGKMEEAR 330
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ +M + G + + N L+ G +++ + E GI P + TYN I +
Sbjct: 331 RFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICA 389
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ G +L+ M P+ + L+ G+ K K+ + + + I
Sbjct: 390 LCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 445
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I LC+ E A+ L + M ++ I P++ TY L+ GF K GNL A +++
Sbjct: 446 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 505
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG-WVPHFSTMKSLVTGLASI 370
M G +PD Y + + G+ + A ++ +A P + + GL +
Sbjct: 506 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 565
Query: 371 SKVAEANEL 379
+ +A E
Sbjct: 566 GNLVKAIEF 574
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 124/295 (42%), Gaps = 7/295 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ ++ + L ++ + +L EE+ T+ PD+ V V G +M A +
Sbjct: 447 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL-VKGFVKNGNLSM---ATE 502
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++EM + G++ A +G + + ++ R+ E P+ YN I
Sbjct: 503 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 562
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G+ ++ R + P+ + ++ G+ + +++ + M + + V
Sbjct: 563 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 622
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + I K R E+A M RG++PN+ T+ L++G K GN++ A +
Sbjct: 623 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 682
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
M G P+ Y + M C ++E +K+ + + K P T ++L L
Sbjct: 683 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 737
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 2/255 (0%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
V + N L+ G I + E +F + + I P+ TYN +I CESG+ +
Sbjct: 410 DVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 468
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
EM + I P+ + L+ GF K +V M + GI Y R +
Sbjct: 469 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 528
Query: 265 LKRSEEAKALLDGMLSRGIK-PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
L S++A L + M++ P+L Y I G K GNL A + + G PD
Sbjct: 529 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 588
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + G+++ A + + K P T L+ G A ++ +A + M
Sbjct: 589 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 648
Query: 384 KKRFPKSGDMWNAAL 398
KKR + M + AL
Sbjct: 649 KKRGVRPNVMTHNAL 663
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%)
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+M RK P+ + ++L V + M + GI V +N + S K
Sbjct: 230 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 289
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
E + M R I+ + TY LI+GF K G +E A++ M G Y F
Sbjct: 290 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 349
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
C+ G ++ A V + G P ST + L ++ +A EL+ M
Sbjct: 350 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 6/161 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D + ++ + + F L +E+ + R + +++YG +A ++ A
Sbjct: 586 DHVTYTTVIRGYLENGQFKMARNLYDEMLRK---RLYPSVITYFVLIYGHAKAGRLEQAF 642
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q EM K G+R +V NALL G + N +E R + + GI PN +Y +I
Sbjct: 643 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE-GIPPNKYSYTMLISK 701
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
C+ V + EM K I P+ L K+H+
Sbjct: 702 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 742
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TY +I ++G + EM+++ +RPN LL G K ++ +
Sbjct: 620 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 679
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L ME+ GI Y + I C ++ EE L ML + I+P+ T++ L K
Sbjct: 680 LCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 739
Query: 300 E 300
+
Sbjct: 740 D 740
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 5/311 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM-IDHAMQTFE 135
AFS +S ++ + + ++ E +K+ L+ N + I G+ + + A + F+
Sbjct: 222 AFSALISAYGRSGYCDEAIKVFETMKS-SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFD 280
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY-GIEPNSETYNKVIKSFCE 194
EM + G++ N+LL C +E + +F+E +Y GIE + TYN ++ + C+
Sbjct: 281 EMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEM--LYRGIEQDIFTYNTLLDAVCK 338
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G + I++EM RK I PN + ++ G+ K + ++ + M+ I
Sbjct: 339 GGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVS 398
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN + KL R EEA + M S GIK + TY L+ G+GK+G E K++F M
Sbjct: 399 YNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMK 458
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
P+ + +GG Y+ A++V R G +L+ L V
Sbjct: 459 AERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVE 518
Query: 375 EANELIGLMKK 385
A + M K
Sbjct: 519 SAVSFLDEMTK 529
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 125/278 (44%), Gaps = 10/278 (3%)
Query: 91 FNAISQLLEELKTRPDLR---QNERFHVHSIV-LYGQANMIDHAMQTFEEMDKYGLRQSV 146
FN +++ +E+ LR Q +R +S++ + G+ + + A F EM G+ Q +
Sbjct: 272 FNRAAEIFDEM-----LRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDI 326
Query: 147 DALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILA 206
N LL + +I +E P+ + I PN TY+ VI + ++G ++
Sbjct: 327 FTYNTLLDAVCKGGQMDLAFQIMSEMPRKH-IMPNVVTYSTVIDGYAKAGRLDEALNLFN 385
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
EM+ SI + + LL+ + K ++E+ V + ME GI YN + K
Sbjct: 386 EMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQG 445
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ EE K + + M + I PNL TY LI + K G + A ++F G + D +
Sbjct: 446 KYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYS 505
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
LC+ G E+A+ +G P+ T S++
Sbjct: 506 ALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSII 543
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++ + + + + Q++ E+ R + N + I Y +A +D A+
Sbjct: 325 DIFTYNTLLDAVCKGGQMDLAFQIMSEMP-RKHIMPNVVTYSTVIDGYAKAGRLDEALNL 383
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM + + N LL +EE + E + GI+ ++ TYN ++ +
Sbjct: 384 FNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM-ESSGIKKDAVTYNALLGGYG 442
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G V + EM+ + I PN + L+ + K Y++ +V + +K G+ + V
Sbjct: 443 KQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVV 502
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+Y+ I +LCK E A + LD M GI+PN+ TY +I FG+ G+ E
Sbjct: 503 LYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAE 553
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 34/151 (22%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE------FP 173
+Y + + A+ +EM+ G+++ NALL G YEEVKR+F E FP
Sbjct: 405 IYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFP 464
Query: 174 K---------VY-------------------GIEPNSETYNKVIKSFCESGDSSSVYSIL 205
VY G++ + Y+ +I + C++G S S L
Sbjct: 465 NLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFL 524
Query: 206 AEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
EM ++ IRPN + ++ F + E V
Sbjct: 525 DEMTKEGIRPNVVTYNSIIDAFGRSGSAECV 555
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 36/174 (20%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG-NLEG 305
G + V ++ I + + +EA + + M S G+KPNL TY +I GK G +
Sbjct: 215 GYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNR 274
Query: 306 AKKLFASMTNGGCEPDSYCFF------------------------------MFTY----- 330
A ++F M G +PD F +FTY
Sbjct: 275 AAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLD 334
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+C+GG+ + A ++ K +P+ T +++ G A ++ EA L MK
Sbjct: 335 AVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMK 388
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 123/280 (43%), Gaps = 34/280 (12%)
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
LL G S E+ +++ K G P+ YN +I + ++ D + LAEM +
Sbjct: 16 LLRGLCRSNQLEKARQLLGRM-KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKN 74
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
P + ++ G K + +D K+L M G + + YN+ ++ LC+ ++ +EA
Sbjct: 75 HCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEA 134
Query: 272 KALLDGMLSRG--------------------------------IKPNLDTYKHLIHGFGK 299
K +L+ M RG + P++ +Y +I+G K
Sbjct: 135 KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCK 194
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G+L+ A ++ MTN GC PD + C+GGE E A+ + + + G P+
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
SL+ L + + +A +++ M++R F +NA +
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 294
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 9/306 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
+ ++ V L +A +LL+E++ D + + +++++ G + +D A +
Sbjct: 81 VTYTNIVDGLCKAGRTKDAVKLLDEMR---DKGCSPNIYTYNVIVEGLCEERKLDEAKKM 137
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM G V N+ + G +E ++ P + P+ +Y VI C
Sbjct: 138 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP----VTPDVVSYTTVINGLC 193
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SGD S +L +M + P+ + L+ GF K + E +L M K G +
Sbjct: 194 KSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 253
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + +L +L +A+ +L M RG P++ +Y I G K ++ AK +F M
Sbjct: 254 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 313
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC P++ + M LC+ E + A+ + + K + L+ GL +
Sbjct: 314 VERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRF 373
Query: 374 AEANEL 379
EA L
Sbjct: 374 DEACAL 379
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 130/323 (40%), Gaps = 23/323 (7%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID----- 128
D ++ +S S+A F + L E+ + + ++V Y N++D
Sbjct: 44 DDAIYNALISGYSKAKDFGQAFKFLAEMV--------KNHCLPTVVTY--TNIVDGLCKA 93
Query: 129 ----HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
A++ +EM G ++ N ++ G + +E K++ E V G P+ T
Sbjct: 94 GRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA-VRGYFPDVVT 152
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN IK C+ LA M + P+ + ++ G K + ++L M
Sbjct: 153 YNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMT 209
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G V Y+ I CK E A LLD ML G +PN+ Y L+ + G++
Sbjct: 210 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 269
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A+ + M G PD + LC+ + A V + +G P+ S+ LV
Sbjct: 270 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329
Query: 365 TGLASISKVAEANELIGLMKKRF 387
L ++ +A L+ ++++
Sbjct: 330 EELCKKKELDDAITLVEQAREKY 352
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 155/369 (42%), Gaps = 52/369 (14%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQAN 125
P +P D ++++ ++ L ++ ++ S++L+++ R PD+ + I + +
Sbjct: 177 PVTP-DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVT----YSSLIDGFCKGG 231
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
++ AM + M K G R ++ A N+LL + + + + E + G P+ +Y
Sbjct: 232 EVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER-RGFTPDVVSY 290
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED-VGKVLQMME 244
N I C++ ++ M + PNA+ + +L+ K+ + +D + V Q E
Sbjct: 291 NACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQARE 350
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI-KP------------------ 285
K I + +Y + + LCK R +EA AL +L I +P
Sbjct: 351 KYQIVD-ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 409
Query: 286 ----------------NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
N+ T+ L+HG + L A+ + +M + G PD +
Sbjct: 410 DKALQIHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 469
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+C+ G+ AL++ ++ G VP T +L+TGL + EA L +
Sbjct: 470 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVA--- 526
Query: 390 SGDMWNAAL 398
+WNA +
Sbjct: 527 ---LWNAMI 532
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M KS +P+A F +LL G + ++ E ++L M++ G +YN I K K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+A L M+ P + TY +++ G K G + A KL M + GC P+ Y + +
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRF 387
LC+ + + A K+ +G+ P T S + GL +V EA + + R
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLA----RM 176
Query: 388 PKSGDM 393
P + D+
Sbjct: 177 PVTPDV 182
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+P++ T+ +++ C S +L M+ P+ + L++G+ K + K
Sbjct: 7 QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
L M K V Y + LCK R+++A LLD M +G PN+ TY ++ G
Sbjct: 67 FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-PHF 357
+E L+ AKK+ M G PD + F LC+ + A R +A+ V P
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA----RKFLARMPVTPDV 182
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
+ +++ GL + A+ ++ M R
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNR 211
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 42/184 (22%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ FEE K G V +AL+ G + EE +FT+ + +N +I
Sbjct: 481 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL--------DVALWNAMI 532
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ E+G + E+ + PNA FG ++G K K E +GK
Sbjct: 533 LGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISG--KLVKAESLGK----------- 579
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
A+ L D + G P+L LI F K G+LE A+++
Sbjct: 580 ---------------------ARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRI 618
Query: 310 FASM 313
F SM
Sbjct: 619 FYSM 622
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 4/339 (1%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
LK+E NP L I A P F + +L + ++++ ++ +
Sbjct: 17 LKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQ-RCT 75
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEM-DKYGLRQSVDALNALLLGCILSKNYEEVKR 167
+E + +I Y + +M D A+ F+ M D +G + + N++L I S + E +
Sbjct: 76 CSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAEL 135
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
FT F + G+ PN +TYN +IK C+ +L M + P+ +G L+
Sbjct: 136 FFTYF-QTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINAL 194
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPN 286
K D ++ M G+ V YNI I + +A + +L+ + P+
Sbjct: 195 AKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPS 254
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
++TY +I+G K G L+ + +++ M PD + F + L + G + A KV +
Sbjct: 255 VETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQ 314
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ G P T ++++GL K+ + EL +M K
Sbjct: 315 EMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSK 353
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 35/340 (10%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQ--------------NER 112
+SP D FS + LS+A +FNA ++ +E+ PD+R N+
Sbjct: 286 KSP-DLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKC 344
Query: 113 FHVHSIVLYGQA------NM----------IDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
F + +++ NM ++ A+ ++ + + GL+ L+ G
Sbjct: 345 FELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGL 404
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+ + RI E + G + ++ Y+ ++ C+ G ++ +M++ + N
Sbjct: 405 CKNGYLNKALRILEE-AENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLN 463
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ F L+ G+ + K E+ VL+ M+ A V YN I LCK +R +A L
Sbjct: 464 SHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLK 523
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
ML G+KP++ TY LI G + ++ A L+ N +PD + + LC
Sbjct: 524 EMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQ 583
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ + AL++ VP T +++ GL EA
Sbjct: 584 KVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEA 623
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P F +L F + +++ + + G++ + YNI I+ CK ++ E+ K L
Sbjct: 112 PGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGL 171
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M G+ P++ +Y LI+ K GNL A +LF M+ G PD C+ + +
Sbjct: 172 LTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLR 231
Query: 335 GGEYETALKVCRASMAKGWV-PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
G++ A ++ + + + V P T ++ GL + K+ E+ E+ MKK KS D+
Sbjct: 232 KGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKN-EKSPDL 290
Query: 394 W 394
+
Sbjct: 291 F 291
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 134/308 (43%), Gaps = 14/308 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR-PDLRQNERFHVHSIVLYG--QANMIDHA 130
D + + ++ L + + N ++LEE + DL + F S+V +G + M++ A
Sbjct: 393 DSTTYGLLINGLCKNGYLNKALRILEEAENEGADL---DTFAYSSMV-HGLCKKGMLEQA 448
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ +M K + + N+L+ G + + EE + E K P +YN +I
Sbjct: 449 VELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM-KSKDCAPTVVSYNTIIN 507
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---G 247
C++ S Y L EM + ++P+ + LL+ G + K V L + +C
Sbjct: 508 GLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEK---VDMALNLWHQCINKR 564
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + ++NI I LC ++ + A + M P+L T+ ++ G K G+ A
Sbjct: 565 LKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEAL 624
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
K++ + G +PD + + LC A++ ++ +G +P+ T LV +
Sbjct: 625 KIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAV 684
Query: 368 ASISKVAE 375
+ E
Sbjct: 685 VDDKPLME 692
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 1/217 (0%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
NS +N +I + + S+L EM+ K P + ++ G K ++ D L
Sbjct: 463 NSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSL 522
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + G+ + Y++ I LC+ ++ + A L +++ +KP+L + +IHG
Sbjct: 523 KEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTA 582
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
++ A ++F M C PD L + G+ ALK+ + G P +
Sbjct: 583 QKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISY 642
Query: 361 KSLVTGLASISKVAEANE-LIGLMKKRFPKSGDMWNA 396
GL S ++V++A E L + + + WN
Sbjct: 643 NITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNV 679
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 5/249 (2%)
Query: 139 KYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K G R LN L+ G C + + + +F P++ G P+ +YN +IK C
Sbjct: 122 KMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL-GYTPDVFSYNALIKGLCVEKK 180
Query: 198 SSSVYSILAEMRRK---SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
S +L M + PN + ++ GF+KE + + + M G V
Sbjct: 181 SQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVT 240
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y+ I LCK + +A+A+L M +G+ PN TY +I G+ G LE A +L M+
Sbjct: 241 YSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMS 300
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +PD + + + C+ G A V + + KG P+ + L+ G A+ +
Sbjct: 301 GSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALI 360
Query: 375 EANELIGLM 383
+ +L+ LM
Sbjct: 361 DVRDLLDLM 369
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 35/238 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY+ +I C++ + +IL M K + PN + +++ G+ + E+
Sbjct: 233 GFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEA 292
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L+ M G+ V Y + IQ CK+ R EA+++ D M+ +G KPN Y L+HG
Sbjct: 293 VRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHG 352
Query: 297 FGKEGNLEGAKKL-----------------------------------FASMTNGGCEPD 321
+ +G L + L F M G PD
Sbjct: 353 YATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPD 412
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + LC+ G E A+ +++G P+ + SL+ GL SI + + EL
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 470
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 1/261 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ A + M G+ + N ++ G EE R+ + G++P+
Sbjct: 250 KAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSG-SGLQPDV 308
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY +I+ +C+ G + S+ M RK +PN+T + +LL G+ + DV +L +
Sbjct: 309 VTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDL 368
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + GI +NI I + K ++A M G++P++ +Y +IH K G
Sbjct: 369 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGR 428
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
+E A F M + G P+ F + LC GE++ ++ + +G P M +
Sbjct: 429 VEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNT 488
Query: 363 LVTGLASISKVAEANELIGLM 383
++ L +V EA + ++
Sbjct: 489 IMDNLCKEGRVVEAQDFFDMV 509
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 13/279 (4%)
Query: 115 VHSIVLYGQAN---MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
++ I+L+G A +ID + M + G+ A N L+ C +K + V + T
Sbjct: 345 IYHILLHGYATKGALID-VRDLLDLMIRDGIPFEHRAFNILI--CAYAK-HGAVDKAMTA 400
Query: 172 FPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
F ++ G+ P+ +Y+ VI C+ G +M + + PN F L+ G
Sbjct: 401 FTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCS 460
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+++ V ++ M GI N + +LCK R EA+ D ++ G+KPN+ +
Sbjct: 461 IGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVS 520
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF--FMFTYFLCQGGEYETALKVCRA 347
Y LI G+ G ++ + K F M + G PDS+ + + YF + G E AL + R
Sbjct: 521 YNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYF--KNGRVEDALALYRE 578
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
K T ++ GL ++ A EL M R
Sbjct: 579 MFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDR 617
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 108/248 (43%), Gaps = 38/248 (15%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F+ + G++ +V + N L+ G C + K E +K+ F + G+ P+S TYN +
Sbjct: 502 AQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQ-FDRMVSI-GLRPDSWTYNAL 559
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE----------HKYEDVGK 238
+ + ++G ++ EM RK ++ A ++L G ++ K D G
Sbjct: 560 LNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGT 619
Query: 239 VLQMMEKCGIASG-------------------------VNVYNIRIQSLCKLKRSEEAKA 273
L++ + G V +NI I +L K+ R +EAK+
Sbjct: 620 QLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKS 679
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L M+ RG P++ TY +I +EG LE + LF SM GC DS+ + L
Sbjct: 680 LFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLL 739
Query: 334 QGGEYETA 341
+ G+ A
Sbjct: 740 EKGDVRRA 747
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++PN +YN +I +C G M +RP++ + LL G++K + ED
Sbjct: 513 GVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDA 572
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + M + + NI + L + R A+ L M+ RG + ++TY ++ G
Sbjct: 573 LALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGG 632
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ ++ A ++F + + E D + F + L + G + A + A + +G VPH
Sbjct: 633 LCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPH 692
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T ++ + E+++L M+K
Sbjct: 693 VITYSLMIKSRIEEGLLEESDDLFLSMEK 721
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ F E G++ + N+L+ G L ++ E + G P+ +TYN
Sbjct: 344 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE-EGCHPDIQTYN 402
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+ G+ S ++ + K P+ F L+ G+ K K + ++++ M +
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 462
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA YN + LCK + E M+ +G PN TY LI F + +E A
Sbjct: 463 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 522
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
K+ M+ G PD+ F Y C+ G+ E A + + KG+ T +L+
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 34/294 (11%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE------FPKV---- 175
+I HA+Q EM + G + N ++ G N + + + P V
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437
Query: 176 ------------------------YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
YGI P++ TYN V+ C++G + V EM K
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
PN + +L+ F + +K E+ KV+ M + G+ +N I C+ E A
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L + +G DT+ LI F + N+ A+K+F M + G DSY + +
Sbjct: 558 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 617
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ + A + KG++P ST ++ L +V +A +I +M K
Sbjct: 618 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 671
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 33/298 (11%)
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+V SI Y +A + A+ FE MD + + A NA++ + + +++ +++
Sbjct: 55 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 114
Query: 173 PKVYGIEPNSETYNKVIKSFCES-------------------------------GDSSSV 201
G+ P+ T+ ++SFC + G +
Sbjct: 115 LAA-GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA 173
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ +M + PN F +L K + G +L + + G++ + YNI I+
Sbjct: 174 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 233
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LC+ R EA L+DGM + + P++ TY LI G K+ + A M N GC PD
Sbjct: 234 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 292
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + C+ + A ++ + ++ KG+VP T SL+ GL + V A EL
Sbjct: 293 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +I C GD + E + K I+P+ + L+ G +
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V+ M + G + YNI I LCK+ +A +++ + +G P++ T+ LI G
Sbjct: 383 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 442
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K L+ A +L M G PD+ + LC+ G+ + + + KG P+
Sbjct: 443 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 502
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T L+ +K+ EA+++I M +
Sbjct: 503 PITYNILIENFCRSNKMEEASKVIVKMSQ 531
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 2/279 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +M+ A + ++ G +L+ G + E +F E + GI+P
Sbjct: 303 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKGIKP 361
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ YN ++K C G ++ EM + P+ + +++ G K D V+
Sbjct: 362 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 421
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
G V +N I CK + + A L++ M GI P+ TY +++G K
Sbjct: 422 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + + F M GC P+ + + C+ + E A KV +G P +
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541
Query: 361 KSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAAL 398
+L+ G + A L L +K + + D +N +
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TYN +I +C+ +L + K P+ + L+ G E E
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + GI + VYN ++ LC A +++ M G P++ TY +I+G
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K GN+ A + G PD + F C+ + ++AL++ G P
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 467
Query: 357 FSTMKSLVTGLASISKVAEANE 378
T S++ GL KV E NE
Sbjct: 468 TITYNSVLNGLCKAGKVNEVNE 489
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TYN +I+ C+ L M + P+ + ++ G+ K ++ ++
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ G Y I LC E A L + ++GIKP++ Y L+ G
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+G + A ++ M GC PD + + LC+ G A V ++ KG++P T
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435
Query: 360 MKSLVTGLASISKVAEANELIGLM 383
+L+ G K+ A +L+ M
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERM 459
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 1/199 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ +TF+EM G + N L+ S EE ++ + + G+ P++
Sbjct: 480 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ-EGLHPDA 538
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
++N +I FC +GD Y + ++ K A F L+ F + K+
Sbjct: 539 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 598
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G + Y + I CK + A L M+ +G P++ T+ +I+
Sbjct: 599 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 658
Query: 303 LEGAKKLFASMTNGGCEPD 321
+ A + M G P+
Sbjct: 659 VFQAVGIIHIMVKIGVVPE 677
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 4/200 (2%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y I+++ +G M + P A + ++ ++ KV M
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G++ ++ + IR++S C R A LL + RG Y ++ G G+
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTH 171
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A++LF M + P+ F + LC+ G+ A + + +G + T +
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 231
Query: 365 TGLASISKVAEANELIGLMK 384
GL ++ EA L+ M+
Sbjct: 232 RGLCEAGRLPEAVRLVDGMR 251
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+++++ G + D N L+ N ++IF E G +S TY +I C
Sbjct: 561 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS-KGHRADSYTYRVLIDGSC 619
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ + Y L EM +K P+ + FG ++ H+ ++ +M K G+ V
Sbjct: 620 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV- 678
Query: 254 VYNIRIQSLCKLKRSEEA--KALLDGMLSRG 282
+ ++ + E A K L++ ++ +G
Sbjct: 679 -----VDTILNADKKEIAAPKILVEDLMKKG 704
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 149/340 (43%), Gaps = 44/340 (12%)
Query: 76 MAFSIAVSKLSQANHFNAISQLL---EELKTRPDLRQNERFHVHSIV-LYGQANMIDHAM 131
+ ++ V+ L++ F AIS LL EE +PD +++I+ + ++ + AM
Sbjct: 93 VTYTALVAALTRQKRFKAISGLLSEMEETGIKPD-----SILLNAIINAFSESGNVKEAM 147
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F++M++ G + + N L+ G + + EE ++ + ++PN+ TYN ++ +
Sbjct: 148 EIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGA 207
Query: 192 FC-----------------------------------ESGDSSSVYSILAEMRRKSIRPN 216
C + G+++ SI+ +M K + PN
Sbjct: 208 LCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPN 267
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
G+++ G+ ++ + +V+ M GI + ++N I+ + S+ L
Sbjct: 268 ERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALT 327
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M G+KP++ T+ +++G+ G ++ +++F M G EPD + F + + G
Sbjct: 328 MMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAG 387
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
E A + G P+ ++++G + K+ +A
Sbjct: 388 EPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKA 427
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 1/290 (0%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
+LLE + +L+ N R + + + I A +M G++ V N L
Sbjct: 183 KLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARA 242
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+ + I + + PN T ++ +CE G+ + ++ MR I P
Sbjct: 243 YAQDGETNKAESIIVDMLN-KKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHP 301
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N F L+ GF + V K L MME+ G+ V ++ + R ++ + +
Sbjct: 302 NLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIF 361
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
D ML GI+P++ + L GF + G A+ L M+ G P+ F C
Sbjct: 362 DDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTA 421
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G+ E A KV P+ T ++L+ G + A E++ +M++
Sbjct: 422 GKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEE 471
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 2/223 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E + IF + G P + TY ++ + ++ +L+EM I+P++
Sbjct: 74 QEAQFIFNSLVE-QGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNA 132
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SR 281
++ F + ++ ++ Q ME+ G + +N I+ +++ EE+ LL+ M +
Sbjct: 133 IINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTT 192
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+KPN TY L+ K+ +++ A + M G +PD + Q GE A
Sbjct: 193 NLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKA 252
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + K P+ T +V G +AEA ++ M+
Sbjct: 253 ESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMR 295
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 89/202 (44%), Gaps = 1/202 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + + A++ M G+ ++ N+L+ G + + + V + T + G++P
Sbjct: 278 YCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEE-SGVKP 336
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ T++ ++ + +G I +M + I P+ F +L GF + + +L
Sbjct: 337 DVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLL 396
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M K G+ V ++ I C + E+A + + M + PNL T++ LI G+G+
Sbjct: 397 NFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEA 456
Query: 301 GNLEGAKKLFASMTNGGCEPDS 322
A+++ M P++
Sbjct: 457 KQPWRAEEILQMMEEMNVVPEN 478
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 1/195 (0%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
K++ E G I + + RP + L+A ++ +++ + +L ME+
Sbjct: 62 KLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEET 121
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + N I + + +EA + M G KP T+ LI G+G E +
Sbjct: 122 GIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEES 181
Query: 307 KKLFASMT-NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
KL MT +P++ + + LC+ + A V +A G P T +L
Sbjct: 182 MKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLAR 241
Query: 366 GLASISKVAEANELI 380
A + +A +I
Sbjct: 242 AYAQDGETNKAESII 256
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 4/186 (2%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G ++ +D A+ EE G++ V + ++ G + ++ + IF + K GIEP+
Sbjct: 317 GDSDGVDKALTMMEE---SGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLK-SGIEPD 372
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
++ + K F +G+ S+L M + +RPN F +++G+ K E KV +
Sbjct: 373 IHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFE 432
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M ++ + + I + K+ A+ +L M + P T K + + G
Sbjct: 433 HMCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIG 492
Query: 302 NLEGAK 307
+ AK
Sbjct: 493 MVNDAK 498
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 9/155 (5%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLL 154
++EE +PD+ S ++ G A +D + F++M K G+ + + L
Sbjct: 328 MMEESGVKPDV------ITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAK 381
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
G + + + + + F YG+ PN + +I +C +G + + M +
Sbjct: 382 GFVRAGEPVKAESLLN-FMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVS 440
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
PN F L+ G+ + + ++LQMME+ +
Sbjct: 441 PNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVV 475
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 246 CG-IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
CG + S + NI L + + +EA+ + + ++ +G +P TY L+ ++ +
Sbjct: 54 CGTVRSRTKLMNI----LVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFK 109
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
L + M G +PDS + G + A+++ + G P ST +L+
Sbjct: 110 AISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLI 169
Query: 365 TGLASISKVAEANELIGLMKK 385
G I K E+ +L+ LM +
Sbjct: 170 KGYGIIRKPEESMKLLELMTR 190
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ F E G++ + N+L+ G L ++ E + G P+ +TYN
Sbjct: 342 VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAE-EGCHPDIQTYN 400
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
VI C+ G+ S ++ + K P+ F L+ G+ K K + ++++ M +
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEY 460
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GIA YN + LCK + E M+ +G PN TY LI F + +E A
Sbjct: 461 GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEA 520
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
K+ M+ G PD+ F Y C+ G+ E A + + KG+ T +L+
Sbjct: 521 SKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 578
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 117/294 (39%), Gaps = 34/294 (11%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE------FPKV---- 175
+I HA+Q EM + G + N ++ G N + + + P V
Sbjct: 376 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 435
Query: 176 ------------------------YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
YGI P++ TYN V+ C++G + V EM K
Sbjct: 436 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 495
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
PN + +L+ F + +K E+ KV+ M + G+ +N I C+ E A
Sbjct: 496 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L + +G DT+ LI F + N+ A+K+F M + G DSY + +
Sbjct: 556 YLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDG 615
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ + A + KG++P ST ++ L +V +A +I +M K
Sbjct: 616 SCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVK 669
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 33/298 (11%)
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+V SI Y +A + A+ FE MD + + A NA++ + + +++ +++
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 112
Query: 173 PKVYGIEPNSETYNKVIKSFCES-------------------------------GDSSSV 201
G+ P+ T+ ++SFC + G +
Sbjct: 113 LAA-GVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA 171
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ +M + PN F +L K + G +L + + G++ + YNI I+
Sbjct: 172 RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRG 231
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LC+ R EA L+DGM + + P++ TY LI G K+ + A M N GC PD
Sbjct: 232 LCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPD 290
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + C+ + A ++ + ++ KG+VP T SL+ GL + V A EL
Sbjct: 291 DFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TY +I C GD + E + K I+P+ + L+ G +
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+V+ M + G + YNI I LCK+ +A +++ + +G P++ T+ LI G
Sbjct: 381 LQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDG 440
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K L+ A +L M G PD+ + LC+ G+ + + + KG P+
Sbjct: 441 YCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPN 500
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T L+ +K+ EA+++I M +
Sbjct: 501 PITYNILIENFCRSNKMEEASKVIVKMSQ 529
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 2/279 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +M+ A + ++ G +L+ G + E +F E + GI+P
Sbjct: 301 YCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKGIKP 359
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ YN ++K C G ++ EM + P+ + +++ G K D V+
Sbjct: 360 DIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVM 419
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
G V +N I CK + + A L++ M GI P+ TY +++G K
Sbjct: 420 NDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + + F M GC P+ + + C+ + E A KV +G P +
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539
Query: 361 KSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAAL 398
+L+ G + A L L +K + + D +N +
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 578
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TYN +I +C+ +L + K P+ + L+ G E E
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + GI + VYN ++ LC A +++ M G P++ TY +I+G
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K GN+ A + G PD + F C+ + ++AL++ G P
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465
Query: 357 FSTMKSLVTGLASISKVAEANE 378
T S++ GL KV E NE
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNE 487
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 1/210 (0%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ Y + P+ TYN +I+ C+ L M + P+ + ++ G+ K
Sbjct: 249 RAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 307
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ ++L+ G Y I LC E A L + ++GIKP++ Y L
Sbjct: 308 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 367
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ G +G + A ++ M GC PD + + LC+ G A V ++ KG+
Sbjct: 368 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 427
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLM 383
+P T +L+ G K+ A +L+ M
Sbjct: 428 LPDVFTFNTLIDGYCKRLKLDSALQLVERM 457
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 1/199 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++ +TF+EM G + N L+ S EE ++ + + G+ P++
Sbjct: 478 KAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQ-EGLHPDA 536
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
++N +I FC +GD Y + ++ K A F L+ F + K+
Sbjct: 537 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 596
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G + Y + I CK + A L M+ +G P++ T+ +I+
Sbjct: 597 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 656
Query: 303 LEGAKKLFASMTNGGCEPD 321
+ A + M G P+
Sbjct: 657 VFQAVGIIHIMVKIGVVPE 675
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 78/200 (39%), Gaps = 4/200 (2%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y I+++ +G M + P A + ++ ++ KV M
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G++ ++ + IR++S C R A LL + RG Y ++ G G+
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAV----AYCTVVCGLYAHGHTH 169
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A++LF M + P+ F + LC+ G+ A + + +G + T +
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWI 229
Query: 365 TGLASISKVAEANELIGLMK 384
GL ++ EA L+ M+
Sbjct: 230 RGLCEAGRLPEAVRLVDGMR 249
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 9/151 (5%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+++++ G + D N L+ N ++IF E G +S TY +I C
Sbjct: 559 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS-KGHRADSYTYRVLIDGSC 617
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ + Y L EM +K P+ + FG ++ H+ ++ +M K G+ V
Sbjct: 618 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEV- 676
Query: 254 VYNIRIQSLCKLKRSEEA--KALLDGMLSRG 282
+ ++ + E A K L++ ++ +G
Sbjct: 677 -----VDTILNADKKEIAAPKILVEDLMKKG 702
>gi|115451563|ref|NP_001049382.1| Os03g0216300 [Oryza sativa Japonica Group]
gi|108706849|gb|ABF94644.1| expressed protein [Oryza sativa Japonica Group]
gi|113547853|dbj|BAF11296.1| Os03g0216300 [Oryza sativa Japonica Group]
gi|215734993|dbj|BAG95715.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 533
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A NAL+ + + EV R+F P P + + +I S SG + + A
Sbjct: 53 AYNALMSAYSRAGRHGEVLRLFRSLP----FAPTAPLFTTLISSLAASGRPLAARAAFAS 108
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
+ + + P A+ F LL + V V + ME G + VYN I LC +
Sbjct: 109 LLKSGVPPTASAFTALLRS--SSDALDFVDSVFRAMEALGCSPDAAVYNWVISMLCDFQL 166
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA LD ML G +P ++ ++ + ++G A +L +M GC PD + +
Sbjct: 167 VQEALGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQNGCPPDVVSYTV 226
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ GE+ T + S ++GW+P T ++GL + + EA + +M+ R
Sbjct: 227 LIEGLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQVDIMRGR 285
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 3/245 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F + K G+ + A ALL S + V +F + G P++ YN VI
Sbjct: 102 ARAAFASLLKSGVPPTASAFTALLRSS--SDALDFVDSVFRAM-EALGCSPDAAVYNWVI 158
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ L M RP A F +L + ++ ++ D G+++ M + G
Sbjct: 159 SMLCDFQLVQEALGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQNGCP 218
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y + I+ LC++ + +L S+G P TY + G + G L+ A +
Sbjct: 219 PDVVSYTVLIEGLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQ 278
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + LC+ + A+ + S GW +L++ L
Sbjct: 279 VDIMRGRGLSVTAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMSRLCD 338
Query: 370 ISKVA 374
+ A
Sbjct: 339 VDDFA 343
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 6/271 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHF-NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
P AF+ + S A F +++ + +E L PD + I + ++ A
Sbjct: 115 PPTASAFTALLRSSSDALDFVDSVFRAMEALGCSPD----AAVYNWVISMLCDFQLVQEA 170
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + M + G R + + A+L + + R+ + G P+ +Y +I+
Sbjct: 171 LGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQ-NGCPPDVVSYTVLIE 229
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C G+ S+V IL E + P A + + ++G + ++ + + +M G++
Sbjct: 230 GLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQVDIMRGRGLSV 289
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+I LC+ EA LL+ G ++ Y L+ + KL
Sbjct: 290 TAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMSRLCDVDDFARVLKLL 349
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+ G PD + F + LC+ G+ A
Sbjct: 350 VDLLKKGIGPDKFSFTIAIRSLCRAGKLRLA 380
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 134/370 (36%), Gaps = 49/370 (13%)
Query: 22 ATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIA 81
A +SLL +G + A A L+S S+ +D A A D ++
Sbjct: 105 AFASLLKSG-------VPPTASAFTALLRSSSDALDFVDSVFRAMEALGCSPDAAVYNWV 157
Query: 82 VSKLSQANHFN-AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+S L A+ L L+ P R R + Y + A + + M +
Sbjct: 158 ISMLCDFQLVQEALGFLDHMLENGP--RPTARSFTAILRAYCEQGRFFDAGRLVDTMIQN 215
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G V + L+ G + V+ I E + G P + TYN + C G
Sbjct: 216 GCPPDVVSYTVLIEGLCRVGEFSTVEMILGE-SESQGWMPTAVTYNIYMSGLCRMGFLDE 274
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN---- 256
+ + MR + + A +L + + + +L+ E+ G V YN
Sbjct: 275 AFRQVDIMRGRGLSVTAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMS 334
Query: 257 -------------------------------IRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
I I+SLC+ + AK L++ ++GIK
Sbjct: 335 RLCDVDDFARVLKLLVDLLKKGIGPDKFSFTIAIRSLCRAGKLRLAKCLIE---NKGIKY 391
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
++ + LIHGF G+L+ ++ M N P+++ M LC+ ++ A +
Sbjct: 392 DVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDVIPNNFTDAMLIDSLCKERKFGEAKRFV 451
Query: 346 RASMAKGWVP 355
S+ G VP
Sbjct: 452 LDSLVNGLVP 461
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 9/252 (3%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDH 129
P D +++++ + L + F+ + +L E +++ + ++++ + G M +D
Sbjct: 218 PPDVVSYTVLIEGLCRVGEFSTVEMILGESESQGWMPTAVTYNIY---MSGLCRMGFLDE 274
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M GL + + ++ +L C+ E + G + + YN ++
Sbjct: 275 AFRQVDIMRGRGLSVTAETVH-ILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLM 333
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ D + V +L ++ +K I P+ F + + + K + K L +E GI
Sbjct: 334 SRLCDVDDFARVLKLLVDLLKKGIGPDKFSFTIAIRSLCRAGKLR-LAKCL--IENKGIK 390
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V +N I C + + M++R + PN T LI KE AK+
Sbjct: 391 YDVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDVIPNNFTDAMLIDSLCKERKFGEAKRF 450
Query: 310 FASMTNGGCEPD 321
G PD
Sbjct: 451 VLDSLVNGLVPD 462
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + +R+ + P PNS T + ++K C + + +L+EM
Sbjct: 175 NTLVAGYCREGRLNDARRLVADMP----FAPNSYTNSTLLKGLCSNKEWDDAEELLSEMI 230
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R PN FG+++ + + VL M KC GV VYN I L +L R E
Sbjct: 231 RSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVE 290
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L D M KP++ +Y ++ G ++G E A L A M C PD F
Sbjct: 291 EALHLFDQM---PCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVI 347
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+LC G + A++V G P T +LV L+ V +A EL+
Sbjct: 348 SYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELL 398
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 17/263 (6%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALL-----LGCILSKNYEEVKRIFTEFPKVYGIEP 180
++D AM+ E+M KYG + +AL+ GC+ ++ + P +P
Sbjct: 355 LVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCV-----DDALELLRTIP----WKP 405
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ Y V+K C + V ++AEM R + + FGL++ ++ + +VL
Sbjct: 406 NTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVL 465
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K G + + +YN I + ++A L M K N+ TY +++ G +
Sbjct: 466 REMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRA 522
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
E A KL A M C P+ F +LCQ G E A++V +P+
Sbjct: 523 EQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIY 582
Query: 361 KSLVTGLASISKVAEANELIGLM 383
+L+ GL+ V +A +L+ M
Sbjct: 583 STLINGLSDQECVDDALKLLNDM 605
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 129/308 (41%), Gaps = 8/308 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ + L +A + +L+ E+ + + NE I Q ++ A++ FE
Sbjct: 510 VTYNYMLKGLCRAEQWEDAGKLVAEM-VKDECLPNEVTFSTLISYLCQKGFVECAIEVFE 568
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M KY +V + L+ G + ++ ++ + P +P++ Y+ +K C +
Sbjct: 569 KMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMP----CKPDTICYSAALKGLCRA 624
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
++ EM RK+ P+ F +L+ + E +V ++M K V +Y
Sbjct: 625 ERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIY 684
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ I + R+E+A LL M +P+ Y + G + E A++L A M
Sbjct: 685 SSLINGFAEQYRAEDALQLLRNM---PCEPDTICYSAALKGLCRAKRWEDARELIAEMFR 741
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
C D F M LCQ G + A +V G P+ SLV G + +V E
Sbjct: 742 KQCPLDEATFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDE 801
Query: 376 ANELIGLM 383
+L+ M
Sbjct: 802 GLKLLSSM 809
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 25/319 (7%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D +S V+ LS+ + +LL + +P+ + VL G +A+ D
Sbjct: 374 DNFTYSALVNALSERGCVDDALELLRTIPWKPNTV------CYRSVLKGLCRADRWDDVG 427
Query: 132 QTFEEMDKYGLRQSVDALN-ALLLGCILSKNY----EEVKRIFTEFPKVYGIEPNSETYN 186
+ EM + L ++D + L++ C+ K EV R T+F G P+ YN
Sbjct: 428 KLVAEMIRNQL--NLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKF----GCSPDIIIYN 481
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I F E+G SV L + S + N + +L G + ++ED GK++ M K
Sbjct: 482 SLINGFSENG---SVDDALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKD 538
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
++ I LC+ E A + + M PN+ Y LI+G + ++ A
Sbjct: 539 ECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDA 598
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KL M C+PD+ C+ LC+ +E A ++ + K +P T L+
Sbjct: 599 LKLLNDMP---CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILINN 655
Query: 367 LASISKVAEANELIGLMKK 385
L + A E+ LM K
Sbjct: 656 LCHKGFLESATEVSELMLK 674
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 6/215 (2%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TYN ++ +C G + ++A+M PN+ LL G +++D ++L M
Sbjct: 173 TYNTLVAGYCREGRLNDARRLVADM---PFAPNSYTNSTLLKGLCSNKEWDDAEELLSEM 229
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G + + I SLC+ ++ A +LD M + Y +I + G +
Sbjct: 230 IRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRV 289
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
E A LF M C+PD + + LC+ G +E A + + K P T ++
Sbjct: 290 EEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTV 346
Query: 364 VTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
++ L V A E++ M K K + +AL
Sbjct: 347 ISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSAL 381
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 23/328 (7%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
KL +A F L+E L +P++ +H Y ++ A F+ M G++
Sbjct: 206 KLKKAKEFIG---LMEALGIKPNVVTYNTI-IHG---YCSRGRVEGARMIFDLMKCRGVK 258
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
+ + G EE + + ++ G+ P + TYN +I +C G+ +
Sbjct: 259 PDSYTYGSFISGMCKEGKLEEASGMLEKMKEI-GLRPTAVTYNTLIDGYCNKGNLEMAFD 317
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+M R+ + P + + +L+ + + K ++ +++ M + G+ YNI I C
Sbjct: 318 YRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYC 377
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+ ++A L D M+S+GI+P TY LI+ K G ++ A LF + G PD
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
F C G + A + + VP T +L+ G KV A ELI M
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497
Query: 384 KKR---------------FPKSGDMWNA 396
K R + K GDM +A
Sbjct: 498 KSRGIKPDHISYNTLISGYSKRGDMKDA 525
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 5/257 (1%)
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP-----KVYGIEPNSETYNKVI 189
E ++ G+ + V + +L +L + E+KR F K G+ P+ N ++
Sbjct: 104 EVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDML 163
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
F +S + + + AEM R I+ + F +++ KE K + + + +ME GI
Sbjct: 164 SLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIK 223
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I C R E A+ + D M RG+KP+ TY I G KEG LE A +
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGM 283
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P + + C G E A + +G +P ST L+ L
Sbjct: 284 LEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL 343
Query: 370 ISKVAEANELIGLMKKR 386
K+ EA+ +I M ++
Sbjct: 344 DCKMDEADGIIKEMSEK 360
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 5/246 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSET 184
+D A +EM + GL N L+ G N VK+ FT ++ GI+P T
Sbjct: 347 MDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGN---VKKAFTLHDEMISKGIQPTRVT 403
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +I + G + ++ RK I P+ F L+ G + +L+ M+
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ + +N +Q C+ + E A+ L++ M SRGIKP+ +Y LI G+ K G+++
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A ++ M + G P + LC+ E + A ++ + ++KG P+ +T SL+
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583
Query: 365 TGLASI 370
G+ ++
Sbjct: 584 EGIGNV 589
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 2/307 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +S + + S +LE++K LR + I Y ++ A
Sbjct: 260 DSYTYGSFISGMCKEGKLEEASGMLEKMK-EIGLRPTAVTYNTLIDGYCNKGNLEMAFDY 318
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M + GL +V N L+ L +E I E + G+ P+S TYN +I +C
Sbjct: 319 RDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSE-KGLVPDSVTYNILINGYC 377
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G+ +++ EM K I+P + L+ K + + + + + + GI +
Sbjct: 378 RCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLI 437
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++N I C + A A+L M + P+ T+ L+ G +EG +E A++L M
Sbjct: 438 MFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEM 497
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ G +PD + + G+ + A +V ++ G+ P T +L+ GL +
Sbjct: 498 KSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEG 557
Query: 374 AEANELI 380
A +L+
Sbjct: 558 DHAEQLL 564
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 1/249 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + F+ M G+ V A N +L + S E+ ++ E ++ I+ + T+N
Sbjct: 138 DDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMR-IKSSVVTFNI 196
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G + M I+PN + ++ G+ + E + +M+ G
Sbjct: 197 MINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRG 256
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y I +CK + EEA +L+ M G++P TY LI G+ +GNLE A
Sbjct: 257 VKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAF 316
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
M G P + M + L + + A + + KG VP T L+ G
Sbjct: 317 DYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGY 376
Query: 368 ASISKVAEA 376
V +A
Sbjct: 377 CRCGNVKKA 385
>gi|242075674|ref|XP_002447773.1| hypothetical protein SORBIDRAFT_06g015370 [Sorghum bicolor]
gi|241938956|gb|EES12101.1| hypothetical protein SORBIDRAFT_06g015370 [Sorghum bicolor]
Length = 380
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 11/242 (4%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV---YSI 204
A NAL+ + ++EV R+F P P + + +I S SG S+ +S+
Sbjct: 50 AYNALMSAYSRAGRHDEVLRLFRSLP----FSPTAPLFTTLISSLAASGSKSAALDAFSL 105
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
LA + P + F LL M G A YN I LC
Sbjct: 106 LA----SGLGPTTSAFTALLKSIDAAPSESVYRAFFGTMAAMGCAPDAATYNCLIWMLCD 161
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+R +EA +LD ML GI P + +Y ++HG+ K+G + A++L +M GC PD
Sbjct: 162 SQRLDEAWGVLDSMLEEGICPTVRSYTAILHGYCKQGRVLEAERLVDTMIQVGCAPDVIS 221
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ + LC+ GE+ ++ S AKGW P+ T ++ L + + EA + +M
Sbjct: 222 YSVLIQGLCRVGEFGKVERILGESEAKGWTPNAVTYNIYMSALCRMGFLDEAFRQVDVML 281
Query: 385 KR 386
R
Sbjct: 282 SR 283
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 5/225 (2%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + + +D A + M + G+ +V + A+L G E +R+ +V G
Sbjct: 156 IWMLCDSQRLDEAWGVLDSMLEEGICPTVRSYTAILHGYCKQGRVLEAERLVDTMIQV-G 214
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ +Y+ +I+ C G+ V IL E K PNA + + ++ + ++
Sbjct: 215 CAPDVISYSVLIQGLCRVGEFGKVERILGESEAKGWTPNAVTYNIYMSALCRMGFLDEAF 274
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT--YKHLIH 295
+ + +M G++ + NI LC+ EA +LL+ S + N+D Y L+
Sbjct: 275 RQVDVMLSRGVSMTIETVNILFDCLCRDSMFSEAVSLLE--YSEELNWNVDVFCYNTLMS 332
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G+ KL + G PD + F + LC+ G+++
Sbjct: 333 RLCDAGDFARVLKLLVDLVKKGIGPDMFSFTIAIRSLCRAGKFKV 377
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 6/248 (2%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
GL + A ALL I + E V R F G P++ TYN +I C+S
Sbjct: 109 GLGPTTSAFTALLKS-IDAAPSESVYRAFFGTMAAMGCAPDAATYNCLIWMLCDSQRLDE 167
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ +L M + I P + +L G+ K+ + + +++ M + G A V Y++ IQ
Sbjct: 168 AWGVLDSMLEEGICPTVRSYTAILHGYCKQGRVLEAERLVDTMIQVGCAPDVISYSVLIQ 227
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LC++ + + +L ++G PN TY + + G L+ A + M + G
Sbjct: 228 GLCRVGEFGKVERILGESEAKGWTPNAVTYNIYMSALCRMGFLDEAFRQVDVMLSRGVSM 287
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGW---VPHFSTMKSLVTGLASISKVAEAN 377
+ LC+ + A+ + S W V ++T+ S + ++V +
Sbjct: 288 TIETVNILFDCLCRDSMFSEAVSLLEYSEELNWNVDVFCYNTLMSRLCDAGDFARVLKL- 346
Query: 378 ELIGLMKK 385
L+ L+KK
Sbjct: 347 -LVDLVKK 353
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P +Y ++ +C+ G ++ M + P+ + +L+ G + ++ V
Sbjct: 179 GICPTVRSYTAILHGYCKQGRVLEAERLVDTMIQVGCAPDVISYSVLIQGLCRVGEFGKV 238
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L E G YNI + +LC++ +EA +D MLSRG+ ++T L
Sbjct: 239 ERILGESEAKGWTPNAVTYNIYMSALCRMGFLDEAFRQVDVMLSRGVSMTIETVNILFDC 298
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++ A L D +C+ LC G++ LK+ + KG P
Sbjct: 299 LCRDSMFSEAVSLLEYSEELNWNVDVFCYNTLMSRLCDAGDFARVLKLLVDLVKKGIGPD 358
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 37/312 (11%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++I V LS A + + EE+K++ +L + F+ I Y +A + A + F+E
Sbjct: 216 YTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDE- 273
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
C+ + GIEPN TY +I FC+ G
Sbjct: 274 ------------------CVGN-----------------GIEPNEHTYGALINGFCKIGQ 298
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ ++ +M+ + + N F ++ G+ +++ + ++ +MEK GI V YN
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
L + R +EAK LL M+ +G++PN +Y LI EG++ A++LF M G
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
EP + + + G A + + KG VP + +LV G KV A
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478
Query: 378 ELIGLMKKRFPK 389
L MK+R K
Sbjct: 479 RLFEEMKQRGSK 490
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 17/286 (5%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK 102
RA R SE + D C G + P + + ++ + A L+ +++
Sbjct: 260 RAGNVRRASE-----VFDECVGNGIEP----NEHTYGALINGFCKIGQMEAAEMLVTDMQ 310
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
R + N+ I Y + NM+D A++ M+K G+ V N L G +
Sbjct: 311 VR-GVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 369
Query: 163 EEVK---RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+E K RI E G+ PN +Y +I C GD + EM P+
Sbjct: 370 DEAKNLLRIMIE----KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 425
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +++ G+ K+ + + + MEK G+ + Y + C + + A L + M
Sbjct: 426 YNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMK 485
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
RG KPNL Y LI G KEG E A +L+ +M G PD +
Sbjct: 486 QRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 531
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+++ E P+ +G++ N+ YN ++ ++ D V +L M + I P + +L+
Sbjct: 163 RQLLDEMPR-HGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G V V + M+ ++ V Y+ I + C+ A + D + GI+P
Sbjct: 222 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 281
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N TY LI+GF K G +E A+ L M G + F C+ + AL++
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G T +L GL +++ EA L+ +M ++
Sbjct: 342 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
V+ +C+SG + +L EM R ++ NA + LL + +E + V ++L++ME G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V Y I + L + + +A+ + M S+ + ++ Y +I+ + + GN+ A
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F G EP+ + + C+ G+ E A + +G + +++ G
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 368 ASISKVAEANELIGLMKK 385
+ V +A E+ +M+K
Sbjct: 329 CRKNMVDKALEIKMIMEK 346
>gi|218192338|gb|EEC74765.1| hypothetical protein OsI_10532 [Oryza sativa Indica Group]
Length = 533
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A NAL+ + + EV R+F P P + + +I S SG + + A
Sbjct: 53 AYNALMSAYSRAGRHGEVLRLFRSLP----FAPTAPLFTTLISSLAASGRPLAARAAFAS 108
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
+ + + P A+ F LL + V V + ME G + VYN I LC +
Sbjct: 109 LLKSGVPPTASAFTALLRS--SSDALDFVDSVFRAMEALGCSPDAAVYNWVISMLCDFQL 166
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA LD ML G +P ++ ++ + ++G A +L +M GC PD + +
Sbjct: 167 VQEALGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQNGCPPDVVSYTV 226
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ GE+ T + S ++GW+P T ++GL + + EA + +M+ R
Sbjct: 227 LIEGLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQVDIMRGR 285
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 3/245 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F + K G+ + A ALL S + V +F + G P++ YN VI
Sbjct: 102 ARAAFASLLKSGVPPTASAFTALLRSS--SDALDFVDSVFRAM-EALGCSPDAAVYNWVI 158
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ L M RP A F +L + ++ ++ D G+++ M + G
Sbjct: 159 SMLCDFQLVQEALGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQNGCP 218
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y + I+ LC++ + +L S+G P TY + G + G L+ A +
Sbjct: 219 PDVVSYTVLIEGLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQ 278
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G + + LC+ + A+ + S GW +L++ L
Sbjct: 279 VDIMRGRGLSVTAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMSRLCD 338
Query: 370 ISKVA 374
+ A
Sbjct: 339 VDDFA 343
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 106/271 (39%), Gaps = 6/271 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHF-NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
P AF+ + S A F +++ + +E L PD + I + ++ A
Sbjct: 115 PPTASAFTALLRSSSDALDFVDSVFRAMEALGCSPD----AAVYNWVISMLCDFQLVQEA 170
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + M + G R + + A+L + + R+ + G P+ +Y +I+
Sbjct: 171 LGFLDHMLENGPRPTARSFTAILRAYCEQGRFFDAGRLVDTMIQ-NGCPPDVVSYTVLIE 229
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C G+ S+V IL E + P A + + ++G + ++ + + +M G++
Sbjct: 230 GLCRVGEFSTVEMILGESESQGWMPTAVTYNIYMSGLCRMGFLDEAFRQVDIMRGRGLSV 289
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+I LC+ EA LL+ G ++ Y L+ + KL
Sbjct: 290 TAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMSRLCDVDDFARVLKLL 349
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+ G PD + F + LC+ G+ A
Sbjct: 350 VDLLKKGIGPDKFSFTIAIRSLCRAGKLRLA 380
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 134/370 (36%), Gaps = 49/370 (13%)
Query: 22 ATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIA 81
A +SLL +G + A A L+S S+ +D A A D ++
Sbjct: 105 AFASLLKSG-------VPPTASAFTALLRSSSDALDFVDSVFRAMEALGCSPDAAVYNWV 157
Query: 82 VSKLSQANHFN-AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+S L A+ L L+ P R R + Y + A + + M +
Sbjct: 158 ISMLCDFQLVQEALGFLDHMLENGP--RPTARSFTAILRAYCEQGRFFDAGRLVDTMIQN 215
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G V + L+ G + V+ I E + G P + TYN + C G
Sbjct: 216 GCPPDVVSYTVLIEGLCRVGEFSTVEMILGE-SESQGWMPTAVTYNIYMSGLCRMGFLDE 274
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN---- 256
+ + MR + + A +L + + + +L+ E+ G V YN
Sbjct: 275 AFRQVDIMRGRGLSVTAETVHILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLMS 334
Query: 257 -------------------------------IRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
I I+SLC+ + AK L++ ++GIK
Sbjct: 335 RLCDVDDFARVLKLLVDLLKKGIGPDKFSFTIAIRSLCRAGKLRLAKCLIE---NKGIKY 391
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
++ + LIHGF G+L+ ++ M N P+++ M LC+ ++ A +
Sbjct: 392 DVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDVIPNNFTDAMLIDSLCKERKFGEAKRFV 451
Query: 346 RASMAKGWVP 355
S+ G VP
Sbjct: 452 LDSLVNGLVP 461
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 103/252 (40%), Gaps = 9/252 (3%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDH 129
P D +++++ + L + F+ + +L E +++ + ++++ + G M +D
Sbjct: 218 PPDVVSYTVLIEGLCRVGEFSTVEMILGESESQGWMPTAVTYNIY---MSGLCRMGFLDE 274
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + M GL + + ++ +L C+ E + G + + YN ++
Sbjct: 275 AFRQVDIMRGRGLSVTAETVH-ILFDCLCRNAMFSEAVCLLEHSEELGWDVDVFCYNTLM 333
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ D + V +L ++ +K I P+ F + + + K + K L +E GI
Sbjct: 334 SRLCDVDDFARVLKLLVDLLKKGIGPDKFSFTIAIRSLCRAGKLR-LAKCL--IENKGIK 390
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V +N I C + + M++R + PN T LI KE AK+
Sbjct: 391 YDVVAFNTLIHGFCIAGDLDRVQQTRTDMINRDVIPNNFTDAMLIDSLCKERKFGEAKRF 450
Query: 310 FASMTNGGCEPD 321
G PD
Sbjct: 451 VLDSLVNGLVPD 462
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 8/303 (2%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
KLS A F+A+ ++++ L PD ++ + L G+ + A++ + M + G +
Sbjct: 122 KLSLA--FSAMGKIIK-LGYEPDTVTFSTL-INGLCLEGR---VSEALELVDRMVEMGHK 174
Query: 144 QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYS 203
++ LNAL+ G L+ + + + G +PN TY V+K C+SG ++
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+L +M + I+ +A + +++ G K+ ++ + ME G + + +Y I+ C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
R ++ LL M+ R I P++ + LI F KEG L A++L M G PD+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ C+ + + A + ++KG P+ T L+ G + + + EL M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 384 KKR 386
R
Sbjct: 414 SLR 416
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 2/307 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD + +SI + L + + L E++ + + + + I + A D +
Sbjct: 245 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAK 303
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+M K + V A +AL+ + E + + E + GI P++ TY +I F
Sbjct: 304 LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGF 362
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ +L M K PN F +L+ G+ K + +D ++ + M G+ +
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN IQ C+L + E AK L M+SR ++P++ +YK L+ G G E A ++F
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
+ E D + + + +C + + A + + KG P T ++ GL
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 373 VAEANEL 379
++EA+ L
Sbjct: 543 LSEADLL 549
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 130/296 (43%), Gaps = 2/296 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +AFS + + +L +E+ R + + + I + + N +D A
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRG-ISPDTVTYTSLIDGFCKENQLDKANHM 374
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ M G ++ N L+ G + ++ +F + + G+ ++ TYN +I+ FC
Sbjct: 375 LDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS-LRGVVADTVTYNTLIQGFC 433
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
E G + EM + +RP+ + +LL G + E ++ + +EK + +
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YNI I +C + ++A L + +G+KP++ TY +I G K+G+L A LF M
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
G P+ + + G+ + K+ G+ ST+K +V L+
Sbjct: 554 EEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 121/297 (40%), Gaps = 7/297 (2%)
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNA 151
+A+ E ++RP R + + S+V + D + ++M+ G+ ++ L+
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVV--ARTKQYDLVLDLCKQMELKGIAHNLYTLSI 112
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
++ C + ++ F+ K+ G EP++ T++ +I C G S ++ M
Sbjct: 113 MINCCCRCR---KLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+P L+ G K D ++ M + G Y ++ +CK ++
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
A LL M R IK + Y +I G K+G+L+ A LF M G + D +
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C G ++ K+ R + + P +L+ K+ EA EL M +R
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQR 346
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 11/269 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMI 127
SP D + ++ + + N + + +L+ + ++ P++R F++ I Y +AN+I
Sbjct: 349 SP-DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT---FNIL-INGYCKANLI 403
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
D ++ F +M G+ N L+ G C L K E K +F E + P+ +Y
Sbjct: 404 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LEVAKELFQEMVS-RRVRPDIVSYK 461
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C++G+ I ++ + + + + +++ G K +D + +
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ V YNI I LCK EA L M G PN TY LI EG+ +
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKS 581
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
KL + G D+ M L G
Sbjct: 582 AKLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+Y + ++S + EM R RP DF L + + +Y+ V + + M
Sbjct: 39 SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
E GIA + +I I C+ ++ A + + ++ G +P+ T+ LI+G EG +
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A +L M G +P LC G+ A+ + + G+ P+ T +
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ + + A A EL+ M++R
Sbjct: 219 LKVMCKSGQTALAMELLRKMEER 241
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 117/240 (48%), Gaps = 1/240 (0%)
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
+G++ N LL + + ++ +++E GI+P+ T+N ++K+ C +
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ +L EM + + P+ T F L+ GF +E E +V M + G ++ N+ I
Sbjct: 199 TAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CKL R E+A + ++ G +P+ TY ++G + ++ A K+ M G +
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + + + LC+ G+ E A + + +G +P +T +L+ L + +++ EA +L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHV 115
LD+ ++ SP D F+I ++ L + + +L EE+K PD +
Sbjct: 376 LDLARQVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL-I 433
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
++ G+ + A+ ++M+ G +S N ++ G EE + +F + +
Sbjct: 434 DNLCSLGK---LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DL 489
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI N+ T+N +I C+ + ++ +M + ++PN + +L + K+ +
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L+ M G V Y I LCK R++ A +L GM +G++P Y ++
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWV 354
+ N+ A LF M G PD+ + + LC+ GG + A + KG++
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669
Query: 355 PHFSTMKSLVTGLASIS 371
P FS+ + L GL ++
Sbjct: 670 PEFSSFRMLAEGLLNLG 686
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 6/300 (2%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
+++D+ P D ++I V+ L + +L ++ R L F+
Sbjct: 306 LKVMDVMVQEGHDP----DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I N ++ A+ ++ G+ V N L+ + R+F E K
Sbjct: 362 -LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KN 419
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G P+ TYN +I + C G +L +M + + ++ G K+ + E+
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+V M+ GI+ +N I LCK K+ ++A L++ M+S G++PN TY ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ K+G+++ A + +MT G E D + LC+ G + ALKV R KG P
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L +A+ +LEE+ +R + +E + + + I+ A++
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVIMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M + G + +N L+ G C L + + + I E G EP+ TYN +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD--GFEPDQITYNTFVNGL 296
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++ ++ M ++ P+ + +++ K + E+ +L M G +
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I +LC R EEA L + +G+ P++ T+ LI+ K G+ A +LF
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M N GC PD + LC G+ AL + + + G T +++ GL +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 373 VAEANELIGLM 383
+ EA E+ M
Sbjct: 477 IEEAEEVFDQM 487
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 8/314 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D++ ++ V+ L Q +H ++++ + PD+ V+ + GQ ++ A
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF-TYNIVVNCLCKNGQ---LEEA 340
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+M G + N L+ EE + + V G+ P+ T+N +I
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-TVKGVSPDVYTFNILIN 399
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C+ GD + EM+ P+ + L+ K +L+ ME G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN I LCK R EEA+ + D M +GI N T+ LI G K+ ++ A +L
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G +P++ + C+ G+ + A + A G+ T +L+ GL
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 371 SKVAEANELIGLMK 384
+ A +++ M+
Sbjct: 580 GRTQVALKVLRGMR 593
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 134/335 (40%), Gaps = 37/335 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F + L + F + L+E ++ R L + F + + Y +A + A++TFE+
Sbjct: 163 GFHNLIEALGKIKQFRLVWSLVETMRCR-GLLSKDTFKL-IVRRYARARKVKEAVETFEK 220
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP---------KVY----------- 176
M +GL+ + N L+ SK ++ + I+ E K Y
Sbjct: 221 MSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEK 280
Query: 177 ---------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
GI P+ Y +I +FC+SG + EM P+ +
Sbjct: 281 DLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYC 340
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ G E + ++ K + +K G V N + + C+ + + A ++D M
Sbjct: 341 MLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKC 400
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+ PN TY ++H K E A +F M GCEP + M C G + A
Sbjct: 401 KVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMA 460
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LKV + KG +P +L+ GL +++ EA
Sbjct: 461 LKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEA 495
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 1/227 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + ++ D A++ F EM+ G S L+ G + +E + F + K G
Sbjct: 308 ISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKS-G 366
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
T N V+ ++C + + ++ EMR+ + PN+ + ++L K K+E+
Sbjct: 367 FPMEVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAY 426
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ Q M G +N Y + + C R + A + M +G+ P + + LI+G
Sbjct: 427 NIFQRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGL 486
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
E LE A F M + G P F L QGG A +V
Sbjct: 487 CFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQEV 533
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +E ++ +I++ + V+S++ MR + + T F L++ + + K ++
Sbjct: 156 GFSYTAEGFHNLIEALGKIKQFRLVWSLVETMRCRGLLSKDT-FKLIVRRYARARKVKEA 214
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIH 295
+ + M G+ + ++ YN I +L K K+ ++A+A+ M +G P+L TY L+
Sbjct: 215 VETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLME 274
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+G E +L K ++ M + G PD + M C+ G+ + A+KV A G +P
Sbjct: 275 GWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMP 334
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
L+ GL S ++ EA + KK FP NA +
Sbjct: 335 SPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVV 378
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 149/332 (44%), Gaps = 9/332 (2%)
Query: 63 CGASLAPE----SPLDRMAFSIAVSKLSQANHFNAISQLLEE---LKTRPDLRQNERFHV 115
C + L P P + F IA+S + Q+ ++ LK +P+L +
Sbjct: 115 CNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLI 174
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
+V Y + I A + F++M K G+ +V N L+ G L E+ +
Sbjct: 175 -GLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+ + P++ TYN ++K+ + G S + +L +M++ + PN + L+ G+ K ++
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+++++M++ + + YNI I LC E L+D M S ++P++ TY LI
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLID 353
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL-KVCRASMAKGWV 354
G + G A+KL M N G + + + +LC+ + E KV G+
Sbjct: 354 GCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T +L+ + ++ A E++ M ++
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 160/379 (42%), Gaps = 51/379 (13%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLE---ELKTR 104
+L S F+I+++ ++ P D ++I ++ L A +L++ LK +
Sbjct: 287 KLGSLKEAFQIVELMKQTNVLP----DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQ 342
Query: 105 PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
PD+ ++ ++ G + + A + E+M+ G++ + N L +
Sbjct: 343 PDVV------TYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA----- 217
E V R E ++G P+ TY+ +IK++ + GD S ++ EM +K I+ N
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 218 ------------------------------TDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+G L+ GF++E K E ++ M+K
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V+ +N I LC ++E A D + G+ P+ T+ +I G+ KEG +E A
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ + +PD+Y + LC+ G E AL + + V T ++++
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAF 635
Query: 368 ASISKVAEANELIGLMKKR 386
K+ EA +L+ M+++
Sbjct: 636 CKDKKLKEAYDLLSEMEEK 654
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 2/184 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ ++EM K + +V N+L+ G E F E + G+ P+ T+N
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE-SGLLPDDSTFN 560
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ G + E + S +P+ +LL G KE E + +
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I + CK K+ +EA LL M +G++P+ TY I ++G L
Sbjct: 621 REVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Query: 307 KKLF 310
+L
Sbjct: 680 DELL 683
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 2/211 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A K G L++G + E+ ++ E KV I P T+N
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV-KITPTVSTFN 525
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G + E+ + P+ + F ++ G+ KE + E + K
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH 585
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
NI + LCK +E+A + ++ + + TY +I F K+ L+ A
Sbjct: 586 SFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEA 644
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
L + M G EPD + + F L + G+
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 116 HSIVL-YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+SI+L Y + ++ A + + E K+ + N LL G E+ F
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL-- 617
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ E ++ TYN +I +FC+ Y +L+EM K + P+ + ++ ++ K
Sbjct: 618 IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLS 677
Query: 235 DVGKVLQ 241
+ ++L+
Sbjct: 678 ETDELLK 684
>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
Length = 439
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKN------YEEVKRIFTEFPKVYG 177
+N I A+ +M+K G+++ V ++ +L+ L KN E +KR+ K G
Sbjct: 96 SNSIKDAVYVAGQMEKMGIKRDV-VVDTILIDT-LCKNRLVVPALEVLKRM-----KDRG 148
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN TY+ +I C+SG + L EM K I PN F L+ + K K V
Sbjct: 149 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 208
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V +MM + I V Y+ I LC R +EA +LD M+S+G PN+ TY L +GF
Sbjct: 209 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 268
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K ++ KL M G ++ Q G+ + AL V + G +P+
Sbjct: 269 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 328
Query: 358 STMKSLVTGLASISKVAEA 376
+ ++ GL + +V +A
Sbjct: 329 RSYNIVLAGLFANGEVEKA 347
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 104/241 (43%), Gaps = 2/241 (0%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE--PNSETYNKVIKSFCESGDSSSVY 202
S+ N +L + Y+ V ++ GIE P+ T N ++ FC SS
Sbjct: 9 SIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSAL 68
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
S L +M + I P+ L+ GF + +D V MEK GI V V I I +L
Sbjct: 69 SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 128
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CK + A +L M RGI PN+ TY LI G K G L A++ M + P+
Sbjct: 129 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 188
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F + G+ V + + P+ T SL+ GL ++V EA +++ L
Sbjct: 189 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 248
Query: 383 M 383
M
Sbjct: 249 M 249
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GIEP+ T + ++ FC S + +M + I+ + +L+ K
Sbjct: 78 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 137
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+VL+ M+ GI+ V Y+ I LCK R +A+ L M S+ I PN+ T+ LI
Sbjct: 138 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 197
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K G L ++ M +P+ + + Y LC + A+K+ ++KG P+
Sbjct: 198 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 257
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L G S+V + +L+ M +R
Sbjct: 258 VVTYSTLANGFFKSSRVDDGIKLLDDMPQR 287
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 113/284 (39%), Gaps = 3/284 (1%)
Query: 98 LEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
LE LK D + +S ++ G ++ + A + EMD + +V +AL+
Sbjct: 138 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 197
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
+V ++ ++ I+PN TY+ +I C +L M K P
Sbjct: 198 YAKRGKLSKVDSVYKMMIQM-SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 256
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N + L GF+K + +D K+L M + G+A+ N I+ + + + A +
Sbjct: 257 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 316
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M S G+ PN+ +Y ++ G G +E A F M + D + + + +C+
Sbjct: 317 GYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKA 376
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ A + K P F ++ L EA+ L
Sbjct: 377 CMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 420
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GIASGVNVY--NIRIQSLCKLKRSEEA 271
P+ +F +L K Y+ V + + +E GI ++Y NI + C+ + A
Sbjct: 8 PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ L M+ GI+P++ T L++GF +++ A + M G + D +
Sbjct: 68 LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LC+ AL+V + +G P+ T SL+TGL ++A+A
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADA 172
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 113/255 (44%), Gaps = 3/255 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
HV ++ + +A TF M YG +V++ NA L +L+ + ++ F
Sbjct: 169 HVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYL-SSLLNFSRGDIALAFYR 227
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ I PNS T N VI + C+ G + EM PN + L+AG+ +
Sbjct: 228 EMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKG 287
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
K+ +MEK G+ V +N + CK+ + +EA L M + P TY
Sbjct: 288 LLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYN 347
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI+G+ K GN E +LF M+ + D + LC+ G+ + A + R K
Sbjct: 348 ILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEK 407
Query: 352 GWVPHFSTMKSLVTG 366
G VP+ ST +L+ G
Sbjct: 408 GLVPNASTFSALIYG 422
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 111/250 (44%), Gaps = 1/250 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A FEEM G +V + N L+ G ++ + K G+ P+ T+N
Sbjct: 254 LDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEK-NGVPPDVVTFN 312
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC+ G + EM+ S+ P + +L+ G+ K E ++ + M +
Sbjct: 313 TLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRF 372
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + + YN I LCK ++++A L+ + +G+ PN T+ LI+G + E A
Sbjct: 373 QVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERA 432
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+++ SM P F M C+ +Y+ A+++ + + P + + L G
Sbjct: 433 FQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAG 492
Query: 367 LASISKVAEA 376
L KV A
Sbjct: 493 LGQCGKVKTA 502
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 2/268 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ + EM + + + LN ++ C ++ +F E + G PN +YN
Sbjct: 220 DIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTM-GFSPNVASYNT 278
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I +C G SS + + M + + P+ F L+ GF K K ++ K+ M+
Sbjct: 279 LIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMS 338
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
++ YNI I K E L + M +K ++ TY LI G KEG + A
Sbjct: 339 LSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAA 398
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L + G P++ F Y C + E A ++ ++ + + P T + L++
Sbjct: 399 YLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTF 458
Query: 368 ASISKVAEANELIGLMKKRFPKSGDMWN 395
A +L+ M R K+ D+ N
Sbjct: 459 CENEDYDGAVQLLEEMLNRH-KAPDVNN 485
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 2/247 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I Y ++ AM+ M+K G+ V N L+ G +E ++F E K
Sbjct: 280 IAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEM-KGMS 338
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P + TYN +I + ++G+ + EM R ++ + + L+ G KE K +
Sbjct: 339 LSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAA 398
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+++ +++ G+ + ++ I C K+SE A + M+ P T++ L+ F
Sbjct: 399 YLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTF 458
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH- 356
+ + +GA +L M N PD + L Q G+ +TA+ +C A+ +P
Sbjct: 459 CENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPEG 518
Query: 357 FSTMKSL 363
F +K+
Sbjct: 519 FDKLKAF 525
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ + M + GL+ + ++ G + + + +V I PN Y+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C+ G S ++ EM+ K I P+ + ++ GF ++ D ++LQ M +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I+ V YN I + K + EA+ L D ML RGI PN TY +I GF K+ L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F M GC P+ F C + +++ G V +T +L+ G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 367 LASISKVAEANELI 380
+ + A +L+
Sbjct: 440 FYLVGDLNAALDLL 453
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+ + + +FTE + GI P+ TYN +I FC SG S +L EM + I P+ +
Sbjct: 271 HSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ F KE K+ + ++ M GI Y+ I CK R + A+ + M ++
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G PNL T+ LI G+ ++ +L MT G D+ + + G+ A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + + ++ G P T +L+ GL K+ +A E+ +M+K
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 15/297 (5%)
Query: 104 RPDL---------RQNERFHVHSIVL----YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
RPDL R+ R ++S + + + + A+ TF ++ K GL V N
Sbjct: 94 RPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFN 153
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
LL G + E +F + + PN T+ ++ C G ++L M
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSE 269
++P +G ++ G K+ +L+ ME+ I V +Y+ I SLCK R
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A+ L M +GI P+L TY +I GF G A++L M PD +
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G++ A ++ + +G +P+ T S++ G +++ A + LM +
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 12/267 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ID M+ EM + GL N L+ G L + + E G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-SGLCP 463
Query: 181 NSETYNKVIKSFCESG---DSSSVYSILAEMRRK--------SIRPNATDFGLLLAGFYK 229
+ T + ++ C++G D+ ++ ++ + ++ + P+ + +L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K+ + ++ + M GI Y+ I LCK R +EA + D M S+ PN+ T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI+G+ K G ++ +LF M G ++ + + G AL + + +
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T+++++TGL S ++ A
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 14/320 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + ++ ++ + F +L +E+ R + N + I + + N +D A
Sbjct: 322 SP-DVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F M G ++ N L+ G +K ++ + E + G+ ++ TYN +I
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIH 438
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---- 246
F GD ++ +L EM + P+ LL G K +D ++ ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 247 -------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
G+ V YNI I L + EA+ L + M RGI P+ TY +I G K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ L+ A ++F SM + P+ F C+ G + L++ +G V + T
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 360 MKSLVTGLASISKVAEANEL 379
+L+ G + + A ++
Sbjct: 619 YITLICGFRKVGNINGALDI 638
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 139/360 (38%), Gaps = 58/360 (16%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDHAMQT 133
+S + L + + L E++ + PDL F +S+++ + + A Q
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL-----FTYNSMIVGFCSSGRWSDAEQL 312
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSF 192
+EM + + V NAL+ + + E + ++ E P+ GI PN+ TY+ +I F
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR--GIIPNTITYSSMIDGF 370
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + + M K PN F L+ G+ + +D ++L M + G+ +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLS-------------------------------- 280
YN I + A LL M+S
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 281 --------------RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
G++P++ TY LI G EG A++L+ M + G PD+ +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A ++ + +K + P+ T +L+ G +V + EL M +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I + + I I+
Sbjct: 65 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 124
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G+ P++ T+ L+HG E + A LF M C P+
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + M G P T ++V G+ A L+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 383 MKK 385
M++
Sbjct: 245 MEE 247
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 15/181 (8%)
Query: 102 KTRPDLRQNERFH-------VHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNAL 152
K++ DL + F+ ++I++ G N A + +EEM G+ +++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G +E ++F PN T+ +I +C++G + EM R+
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS-LCKLKRSEEA 271
I NA + L+ GF K + Q M I+SGV I I++ L L EE
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEM----ISSGVYPDTITIRNMLTGLWSKEEL 667
Query: 272 K 272
K
Sbjct: 668 K 668
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ + M + GL+ + ++ G + + + +V I PN Y+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C+ G S ++ EM+ K I P+ + ++ GF ++ D ++LQ M +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I+ V YN I + K + EA+ L D ML RGI PN TY +I GF K+ L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F M GC P+ F C + +++ G V +T +L+ G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 367 LASISKVAEANELI 380
+ + A +L+
Sbjct: 440 FYLVGDLNAALDLL 453
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+ + + +FTE + GI P+ TYN +I FC SG S +L EM + I P+ +
Sbjct: 271 HSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ F KE K+ + ++ M GI Y+ I CK R + A+ + M ++
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G PNL T+ LI G+ ++ +L MT G D+ + + G+ A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + + ++ G P T +L+ GL K+ +A E+ +M+K
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 15/297 (5%)
Query: 104 RPDL---------RQNERFHVHS----IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
RPDL R+ R ++S I + + + A+ TF ++ K GL V
Sbjct: 94 RPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFT 153
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
LL G + E +F + + PN T+ ++ C G ++L M
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSE 269
++P +G ++ G K+ +L+ ME+ I V +Y+ I SLCK R
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A+ L M +GI P+L TY +I GF G A++L M PD +
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G++ A ++ + +G +P+ T S++ G +++ A + LM +
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 12/267 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ID M+ EM + GL N L+ G L + + E G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-SGLCP 463
Query: 181 NSETYNKVIKSFCESG---DSSSVYSILAEMRRK--------SIRPNATDFGLLLAGFYK 229
+ T + ++ C++G D+ ++ ++ + ++ + P+ + +L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K+ + ++ + M GI Y+ I LCK R +EA + D M S+ PN+ T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI+G+ K G ++ +LF M G ++ + + G AL + + +
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T+++++TGL S ++ A
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 14/320 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + ++ ++ + F +L +E+ R + N + I + + N +D A
Sbjct: 322 SP-DVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F M G ++ N L+ G +K ++ + E + G+ ++ TYN +I
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIH 438
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---- 246
F GD ++ +L EM + P+ LL G K +D ++ ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 247 -------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
G+ V YNI I L + EA+ L + M RGI P+ TY +I G K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ L+ A ++F SM + P+ F C+ G + L++ +G V + T
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 360 MKSLVTGLASISKVAEANEL 379
+L+ G + + A ++
Sbjct: 619 YITLICGFRKVGNINGALDI 638
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 139/360 (38%), Gaps = 58/360 (16%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDHAMQT 133
+S + L + + L E++ + PDL F +S+++ + + A Q
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL-----FTYNSMIVGFCSSGRWSDAEQL 312
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSF 192
+EM + + V NAL+ + + E + ++ E P+ GI PN+ TY+ +I F
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR--GIIPNTITYSSMIDGF 370
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + + M K PN F L+ G+ + +D ++L M + G+ +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLS-------------------------------- 280
YN I + A LL M+S
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 281 --------------RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
G++P++ TY LI G EG A++L+ M + G PD+ +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A ++ + +K + P+ T +L+ G +V + EL M +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I + +NI I+
Sbjct: 65 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCF 124
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G+ P++ T+ L+HG E + A LF M C P+
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + M G P T ++V G+ A L+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 383 MKK 385
M++
Sbjct: 245 MEE 247
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 15/181 (8%)
Query: 102 KTRPDLRQNERFH-------VHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNAL 152
K++ DL + F+ ++I++ G N A + +EEM G+ +++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G +E ++F PN T+ +I +C++G + EM R+
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS-LCKLKRSEEA 271
I NA + L+ GF K + Q M I+SGV I I++ L L EE
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEM----ISSGVYPDTITIRNMLTGLWSKEEL 667
Query: 272 K 272
K
Sbjct: 668 K 668
>gi|326497659|dbj|BAK05919.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 13/328 (3%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQN----ERFHVHSIVL--YGQANMIDHA 130
A ++ + +L + + ++ L+ +L+ DLR V++I++ Y + + A
Sbjct: 172 ALAVCLDRLVSSRCPDVLADLIADLR---DLRNKYLPAPNTCVYNILIKHYVKNGDSETA 228
Query: 131 MQTFEEMDKY---GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ +EM +Y +R ++ + LL G + +E +F + I P+ TYN
Sbjct: 229 FRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQLTYNV 288
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC G +I MR+ PNA ++ L+ G K+ E+ V + M G
Sbjct: 289 IIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEEMRSAG 348
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y I LC+ +E L+ M +G K ++ TY L+ G K+G +
Sbjct: 349 VEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVM 408
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
L + G + + + + LC G+ E A+ + + +G++PH++ L+ GL
Sbjct: 409 DLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGL 468
Query: 368 ASISKVAEAN-ELIGLMKKRFPKSGDMW 394
+ +VA+A L GL K F W
Sbjct: 469 CDVGRVADATAALYGLAKFGFMPEASCW 496
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+ E K +F E + G+EP++ +Y +I C G ++ EMR K + + +
Sbjct: 333 DVENAKLVFEEM-RSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTY 391
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
LLL G K+ + +V +L + + G+ V Y I + +LC E+A LL ML
Sbjct: 392 NLLLEGLCKDGRMAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLG 451
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
RG P+ L+ G G + A + G P++ C+ +C+
Sbjct: 452 RGFLPHYAASNKLLIGLCDVGRVADATAALYGLAKFGFMPEASCWAKLIEAVCR 505
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 1/156 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D + EM + G + V N LL G EV + P+ G++ N +Y
Sbjct: 369 VDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGRMAEVMDLLGRLPE-EGVQLNVASYR 427
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ + C SGD +L M + P+ LL G + D L + K
Sbjct: 428 IVMNTLCSSGDMEKAVGLLGLMLGRGFLPHYAASNKLLIGLCDVGRVADATAALYGLAKF 487
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
G + + I+++C+ ++ + LLD +++ G
Sbjct: 488 GFMPEASCWAKLIEAVCRDRKLRRSVELLDILITGG 523
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 123/280 (43%), Gaps = 1/280 (0%)
Query: 101 LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
+ T P N I +Y + M+ HA+ TF M G + SV N ++ + +
Sbjct: 95 MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNC 154
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
V F + + PN ++N +I C G +IL M R P +
Sbjct: 155 RAHLVWSFFKQML-TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSY 213
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
LL+ K+ +++ ++ ME GI + V YN+ I SLC+ RS + +L M +
Sbjct: 214 NTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRN 273
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+ I PN +Y LI+GF KEG + A ++F M P+ + + C G +E
Sbjct: 274 KMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEE 333
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
AL+V A P+ T+ +L+ GL +K A ++
Sbjct: 334 ALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL 373
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 5/233 (2%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + R+F E ++ + PN TYN +I +C +G+ +L M
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIEL-NLSPNLITYNILINGYCINGNFEEALRVLDVME 342
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV--YNIRIQSLCKLKR 267
+RPN G LL G YK K++ +L+ C + +N + + I LC+
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILE--RYCINRTSLNCISHTVMIDGLCRNGL 400
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+EA LL M G+ P++ T+ LI+GF K GN+ AK++ + + G P++ F
Sbjct: 401 LDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFST 460
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
Y C+ G A+K A G T SLV L K+ EA E +
Sbjct: 461 LIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL 513
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 11/328 (3%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
F++L C + P D + FS+ ++ + + N +++ ++ + N F
Sbjct: 405 FQLLIEMCKDGVHP----DIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIF-- 458
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
S ++Y + + AM+ + M+ G N+L+ + E +
Sbjct: 459 -STLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHIS 517
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
++ G+ PNS T++ +I + GD S +S+ M P+ +G LL K +
Sbjct: 518 RI-GLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNF 576
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ K+L+ + +A YN I + K EA L + M+ I P+ TY +
Sbjct: 577 WEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCI 636
Query: 294 IHGFGKEGNLEGAKKLFAS-MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+ G +EG L A M +S + F L + G+ + AL + + KG
Sbjct: 637 LSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKG 696
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELI 380
+ S+ G + + KV A+ LI
Sbjct: 697 LSLDLIALNSITDGYSRMGKVFSASSLI 724
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Query: 145 SVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+VD + N L++ S N E R+F E + I P+S TY ++ G +
Sbjct: 592 AVDTISYNTLIVEISKSGNLLEAVRLFEEMIQ-NNILPDSYTYTCILSGLIREGRLVCAF 650
Query: 203 SILAEMRRKSIRP-NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
L + +K I N+ + + G +K + + + + ME+ G++ + N
Sbjct: 651 IFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDG 710
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
++ + A +L+ ++ + PNL T+ L+HG+ + ++ KL+ M G P+
Sbjct: 711 YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ LC G E +K M K ++ ST+ L + I K E N+L
Sbjct: 771 RLTYHSLILGLCNHGMLELGIK-----MLKMFIAESSTIDDLTFNML-IRKCCEINDL 822
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 10/285 (3%)
Query: 112 RFHVHSIVLYGQANMIDHAMQTFE-EMDKYGLRQS--VDAL--NALLLGCILSKNYEEVK 166
R HS++L + +H M +M K + +S +D L N L+ C + ++V
Sbjct: 771 RLTYHSLIL----GLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVI 826
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+ T +V+ + + +T V S + + + EM +K P + + ++
Sbjct: 827 DL-THNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKR 885
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ + K+ M GI+ ++ L + EEA +L ML P
Sbjct: 886 MCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPT 945
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
T+ L+H F K+ N + A L M + + D + + C G+ TAL
Sbjct: 946 TSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYE 1005
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
KG +P+ +T + LV+ +++ V+ ++ + R SG
Sbjct: 1006 EIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSG 1050
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 1/206 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ +YN ++K+ C+S S VY+ + EMR K ++PN + +L+ + +
Sbjct: 196 PDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATR 255
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
++ ++E+ G +YN ++ C L R EA + + M +G++P+L TY LI G
Sbjct: 256 LVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLS 315
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G + AKKL M G PD + +C+ GE AL + KG P+
Sbjct: 316 KSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTC 375
Query: 359 TMKSLVTGLASISKVAEANELIGLMK 384
T +L+ GL +A EL G MK
Sbjct: 376 TYNTLLHGLCKSRMFDKAMELYGAMK 401
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 115/256 (44%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A+ +D A++ +E+ + + N L+ S+ V E + ++PN
Sbjct: 176 ADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLV 235
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY +I + C + + ++ + + +P+ + ++ G+ + + +V M
Sbjct: 236 TYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRM 295
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
++ G+ + YN I L K R EAK LL M +G P+ TY L++G ++G
Sbjct: 296 KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGET 355
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A L M GC P++ + + LC+ ++ A+++ A + G ++ +
Sbjct: 356 LAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATF 415
Query: 364 VTGLASISKVAEANEL 379
V L S+ +VA+A E+
Sbjct: 416 VRALCSVGRVADAYEV 431
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 180 PNSETYNKVIKSFCESGDS-----SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
P+ TY+ ++ C+S DS S ++ L M I P+ L + + +
Sbjct: 121 PDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRVD 180
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-GIKPNLDTYKHL 293
D ++++ + + + YN +++LCK + A +D M ++ +KPNL TY L
Sbjct: 181 DAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTYTIL 240
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I NL A +L + G +PD + + C A++V KG
Sbjct: 241 IDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKEKGV 300
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLM--KKRFP 388
P T +L+ GL+ +V+EA +L+ +M K FP
Sbjct: 301 EPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFP 337
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 112/240 (46%), Gaps = 7/240 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
D +++ V L ++ + + ++E++T+ D++ N ++I++ N + A
Sbjct: 197 DIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPN--LVTYTILIDNVCNTKNLREAT 254
Query: 132 QTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ + +++ G + N ++ G C+LS+ E ++ ++ K G+EP+ TYN +I
Sbjct: 255 RLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIE-VYNRM-KEKGVEPDLITYNTLIF 312
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+SG S +L M K P+ + L+ G ++ + +L+ ME G +
Sbjct: 313 GLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSP 372
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN + LCK + ++A L M S G+K ++ +Y + G + A ++F
Sbjct: 373 NTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVF 432
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ + M + G+ + N L+ G S E K++ + G P+ TY ++
Sbjct: 288 AIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAE-KGHFPDEVTYTSLM 346
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C G++ + ++L EM K PN + LL G K ++ ++ M+ G+
Sbjct: 347 NGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLK 406
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ Y +++LC + R +A + D
Sbjct: 407 LDMASYATFVRALCSVGRVADAYEVFD 433
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 151/339 (44%), Gaps = 36/339 (10%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ ++ L++ F +I L+ +L+ + L+ + F I + ++ + AM+ F
Sbjct: 107 ITYTTLLAALTRQKRFKSIPSLISKLE-KNGLKPDSVFFNAMINAFSESGNVKEAMKIFR 165
Query: 136 EMDKYGLRQSVDALNALLLG---------CI---------------------LSKNYEEV 165
+M G + + N L+ G C+ L + +
Sbjct: 166 KMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNK 225
Query: 166 KRIFTEFPKVY-----GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
KRI + VY G++P+ TYN + +++ ++G++S ++ EM+ + PN
Sbjct: 226 KRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTC 285
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
G+++ G+ KE K +D + L M G+ + ++N I+ + ++ L M
Sbjct: 286 GIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEE 345
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G+KP++ T+ +++ + G ++ +++F M G EPD + F + + GE E
Sbjct: 346 FGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEK 405
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A + A G P+ ++++G S K+ A+ +
Sbjct: 406 AESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRV 444
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
YG+ PN +N +IK F + D+ V L M ++P+ F ++ + +
Sbjct: 311 YGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIM------NAWSS 364
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
VG +M+KC + + D M+ GI+P++ + L
Sbjct: 365 VG----LMDKC-------------------------QEIFDDMVKAGIEPDIHAFSILAK 395
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+ + G E A+ L +M G +P+ F C G+ E A +V G P
Sbjct: 396 GYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICP 455
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ T ++L+ G + +A EL+ +M+++
Sbjct: 456 NLKTFETLIWGYGEAKEPQKAEELLQIMEQK 486
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 73/195 (37%), Gaps = 1/195 (0%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
K++ E G I + + RP + LLA ++ +++ + ++ +EK
Sbjct: 76 KLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKN 135
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ +N I + + +EA + M RG KP T+ LI G+G G E
Sbjct: 136 GLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEEC 195
Query: 307 KKLFASMTN-GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
KL M+ +P+ F C A V A G P T +L
Sbjct: 196 LKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLAR 255
Query: 366 GLASISKVAEANELI 380
A + + A +I
Sbjct: 256 AYAQNGETSRAEGMI 270
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E + IF + G P TY ++ + S+ S+++++ + ++P++ F
Sbjct: 88 QEAQLIFNSLTE-EGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNA 146
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSR 281
++ F + ++ K+ + M+ G + +N I+ EE LLD M
Sbjct: 147 MINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEE 206
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+KPN T+ LI + + + A + M G +PD + Q GE A
Sbjct: 207 NVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRA 266
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ +EA+ + + + G +P L TY L+ ++ + L + + G +PDS F
Sbjct: 86 KPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFN 145
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ G + A+K+ R +G P ST +L+ G + E +L+ LM +
Sbjct: 146 AMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQ 204
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 116/264 (43%), Gaps = 5/264 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ M++ A +E M ++G+ +V N +L C + + E V +I+ E K IE +
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEM-KRRNIEFSE 273
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I F ++G +MRR F L+ G+ K+ ++D V
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M GI + YNI I +LC R ++A+ LL M + P++ +Y L+HG+ K G
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 389
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A LF + G P + LC+ G E A ++ + P T +
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
LV G ++ A E+ M ++
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRK 473
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 8/247 (3%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+++ + S+ N L+ G S N E +R+ E I P+ TY ++K F
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL-IFPDVITYTTLVKGFV 455
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI----A 249
++G+ S + EM RK I+P+ + G E + D K ++ E+ A
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG---ELRLGDSDKAFRLHEEMVATDHHA 512
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +YN+RI LCK+ +A + G+ P+ TY +I G+ + G + A+ L
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ M P +F+ Y + G E A + +G P+ T +L+ G+
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCK 632
Query: 370 ISKVAEA 376
+ EA
Sbjct: 633 AGNIDEA 639
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 5/204 (2%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P + TYN I + C+ G +L+ M P+ + L+ G+ K K+ +
Sbjct: 338 GIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEA 393
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ + I + YN I LC+ E A+ L + M ++ I P++ TY L+ G
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 453
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG-WVP 355
F K GNL A +++ M G +PD Y + + G+ + A ++ +A P
Sbjct: 454 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 513
Query: 356 HFSTMKSLVTGLASISKVAEANEL 379
+ + GL + + +A E
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEF 537
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 124/295 (42%), Gaps = 7/295 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ ++ + L ++ + +L EE+ T+ PD+ V V G +M A +
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL-VKGFVKNGNLSM---ATE 465
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
++EM + G++ A +G + + ++ R+ E P+ YN I
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G+ ++ R + P+ + ++ G+ + +++ + M + + V
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 585
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + I K R E+A M RG++PN+ T+ L++G K GN++ A +
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 645
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
M G P+ Y + M C ++E +K+ + + K P T ++L L
Sbjct: 646 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 2/255 (0%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
V + N L+ G I + E +F + + I P+ TYN +I CESG+ +
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDL-RAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
EM + I P+ + L+ GF K +V M + GI Y R +
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 265 LKRSEEAKALLDGMLSRGIK-PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
L S++A L + M++ P+L Y I G K GNL A + + G PD
Sbjct: 492 LGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHV 551
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ + G+++ A + + K P T L+ G A ++ +A + M
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 611
Query: 384 KKRFPKSGDMWNAAL 398
KKR + M + AL
Sbjct: 612 KKRGVRPNVMTHNAL 626
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 69/177 (38%)
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+M RK P+ + ++L V + M + GI V +N + S K
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
E + M R I+ + TY LI+GF K G +E A++ M G Y F
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
C+ G ++ A V + G P ST + L ++ +A EL+ M
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 6/165 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAM 131
D + ++ + + F L +E+ + R + +++YG A ++ A
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRK---RLYPSVITYFVLIYGHAKAGRLEQAF 605
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q EM K G+R +V NALL G + N +E R + + GI PN +Y +I
Sbjct: 606 QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE-GIPPNKYSYTMLISK 664
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
C+ V + EM K I P+ L K+H+ +V
Sbjct: 665 NCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV 709
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TY +I ++G + EM+++ +RPN LL G K ++ +
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L ME+ GI Y + I C ++ EE L ML + I+P+ T++ L K
Sbjct: 643 LCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Query: 300 E 300
+
Sbjct: 703 D 703
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ + M + GL+ + ++ G + + + +V I PN Y+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C+ G S ++ EM+ K I P+ + ++ GF ++ D ++LQ M +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I+ V YN I + K + EA+ L D ML RGI PN TY +I GF K+ L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F M GC P+ F C + +++ G V +T +L+ G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 367 LASISKVAEANELI 380
+ + A +L+
Sbjct: 440 FYLVGDLNAALDLL 453
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+ + + +FTE + GI P+ TYN +I FC SG S +L EM + I P+ +
Sbjct: 271 HSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ F KE K+ + ++ M GI Y+ I CK R + A+ + M ++
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G PNL T+ LI G+ ++ +L MT G D+ + + G+ A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + + ++ G P T +L+ GL K+ +A E+ +M+K
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 12/267 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ID M+ EM + GL N L+ G L + + E G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-SGLCP 463
Query: 181 NSETYNKVIKSFCESG---DSSSVYSILAEMRRK--------SIRPNATDFGLLLAGFYK 229
+ T + ++ C++G D+ ++ ++ + ++ + P+ + +L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K+ + ++ + M GI Y+ I LCK R +EA + D M S+ PN+ T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI+G+ K G ++ +LF M G ++ + + G AL + + +
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T+++++TGL S ++ A
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 123/297 (41%), Gaps = 15/297 (5%)
Query: 104 RPDL---------RQNERFHVHS----IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
RPDL R+ R ++S I + + + A+ TF ++ K GL V
Sbjct: 94 RPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFT 153
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
LL G + E F + + PN T+ ++ C G ++L M
Sbjct: 154 TLLHGLCVEDRVSEALDFFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSE 269
++P +G ++ G K+ +L+ ME+ I V +Y+ I SLCK R
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A+ L M +GI P+L TY +I GF G A++L M PD +
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G++ A ++ + +G +P+ T S++ G +++ A + LM +
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 14/320 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + ++ ++ + F +L +E+ R + N + I + + N +D A
Sbjct: 322 SP-DVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F M G ++ N L+ G +K ++ + E + G+ ++ TYN +I
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIH 438
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---- 246
F GD ++ +L EM + P+ LL G K +D ++ ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 247 -------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
G+ V YNI I L + EA+ L + M RGI P+ TY +I G K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ L+ A ++F SM + P+ F C+ G + L++ +G V + T
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 360 MKSLVTGLASISKVAEANEL 379
+L+ G + + A ++
Sbjct: 619 YITLICGFRKVGNINGALDI 638
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 139/360 (38%), Gaps = 58/360 (16%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDHAMQT 133
+S + L + + L E++ + PDL F +S+++ + + A Q
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL-----FTYNSMIVGFCSSGRWSDAEQL 312
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSF 192
+EM + + V NAL+ + + E + ++ E P+ GI PN+ TY+ +I F
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR--GIIPNTITYSSMIDGF 370
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + + M K PN F L+ G+ + +D ++L M + G+ +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLS-------------------------------- 280
YN I + A LL M+S
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 281 --------------RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
G++P++ TY LI G EG A++L+ M + G PD+ +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A ++ + +K + P+ T +L+ G +V + EL M +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I + +NI I+
Sbjct: 65 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCF 124
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G+ P++ T+ L+HG E + A F M C P+
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNV 184
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + M G P T ++V G+ A L+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 383 MKK 385
M++
Sbjct: 245 MEE 247
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 15/181 (8%)
Query: 102 KTRPDLRQNERF-------HVHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNAL 152
K++ DL + F ++I++ G N A + +EEM G+ +++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G +E ++F PN T+ +I +C++G + EM R+
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS-LCKLKRSEEA 271
I NA + L+ GF K + Q M I+SGV I I++ L L EE
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEM----ISSGVYPDTITIRNMLTGLWSKEEL 667
Query: 272 K 272
K
Sbjct: 668 K 668
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN+ +N ++ + C+ G S+ Y + MR + P + LL+ GF KE K
Sbjct: 40 GCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRA 99
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++LQ M G YN + LCK + ++A AL M + I+ ++ Y LI G
Sbjct: 100 LEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDG 159
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ G L A L M N GC P C+ +LC+G A K+ + G +P
Sbjct: 160 LCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPD 219
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
+ T +V G ++ +A L+ MK
Sbjct: 220 WLTFGMMVFGYCRGHRIDDALLLLQQMK 247
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 118/287 (41%), Gaps = 16/287 (5%)
Query: 111 ERFHVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
E+ + ++V +G +AN + A + E M + G NAL+ I+ +
Sbjct: 3 EKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFP-----NALVFNGIMDALCK 57
Query: 164 EVKRI----FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
E + F E + G+ P TYN +I FC+ IL EM + PN
Sbjct: 58 EGRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVT 117
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L G K K +D + + M + I V Y I LC+ + EA +LLD M
Sbjct: 118 YNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G P Y ++ K + A KLF MT G PD F M + C+G +
Sbjct: 178 NSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRID 237
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
AL + + + G P +L+ L +V+EA L+ M R
Sbjct: 238 DALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISR 284
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M K P FG+L+ G K ++ D +++++M + G V+N + +LCK R
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
S EA ++ M S G+ P + TY LI GF KE L A ++ MT G EP+ +
Sbjct: 61 SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
F + LC+ G+ + AL + RA K +L+ GL K+AEA L+ M+
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 387 -FPKSGDMWNAAL 398
PK G +NA L
Sbjct: 181 CVPKPG-CYNAIL 192
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 4/215 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P T+ ++ C++ + + ++ M + PNA F ++ KE + +
Sbjct: 5 GCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEA 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M G++ + YN+ I CK ++ A +L M RG +PN TY +HG
Sbjct: 65 YGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG 124
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G ++ A LF +MT D Y + LCQ G+ A + G VP
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPK 184
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
++++ L S++ EA++L KR SG
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKLF----KRMTGSG 215
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ +++ + + + ++L+E+ R P+ F +H + YG+ +D A+
Sbjct: 81 VTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTF-LHGLCKYGK---VDDALA 136
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F M + +R V L+ G + E + E G P YN ++
Sbjct: 137 LFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS-GCVPKPGCYNAILSWL 195
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + + + M I P+ FG+++ G+ + H+ +D +LQ M+ G+A
Sbjct: 196 CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPRE 255
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+YN I +L + R EA LL M+SRG+ PN TY
Sbjct: 256 VIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 108/284 (38%), Gaps = 2/284 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ F I V L +AN +L+E + R F+ L + + A E
Sbjct: 11 VTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAE-AYGFIE 69
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G+ ++ N L+ G + I E G EPN TYN + C+
Sbjct: 70 TMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTG-RGHEPNHVTYNTFLHGLCKY 128
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++ M K IR + + L+ G + K + +L ME G Y
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + LCK R EA L M GI P+ T+ ++ G+ + ++ A L M +
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G P + L + G A ++ + +++G P+ T
Sbjct: 249 AGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRT 292
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ + M + GL+ + ++ G + + + +V I PN Y+
Sbjct: 200 IVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C+ G S ++ EM+ K I P+ + ++ GF ++ D ++LQ M +
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I+ V YN I + K + EA+ L D ML RGI PN TY +I GF K+ L+ A
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +F M GC P+ F C + +++ G V +T +L+ G
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 367 LASISKVAEANELI 380
+ + A +L+
Sbjct: 440 FYLVGDLNAALDLL 453
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+ + + +FTE + GI P+ TYN +I FC SG S +L EM + I P+ +
Sbjct: 271 HSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ F KE K+ + ++ M GI Y+ I CK R + A+ + M ++
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G PNL T+ LI G+ ++ +L MT G D+ + + G+ A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + + ++ G P T +L+ GL K+ +A E+ +M+K
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 125/297 (42%), Gaps = 15/297 (5%)
Query: 104 RPDL---------RQNERFHVHSIVL----YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
RPDL R+ R ++S + + + + A+ TF ++ K GL V N
Sbjct: 94 RPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFN 153
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
LL G + E +F + + PN T+ ++ C G ++L M
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSE 269
++P +G ++ G K+ +L+ ME+ I V +Y+ I SLCK R
Sbjct: 213 DGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A+ L M +GI P+L TY +I GF G A++L M PD +
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G++ A ++ + +G +P+ T S++ G +++ A + LM +
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 12/267 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ID M+ EM + GL N L+ G L + + E G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-SGLCP 463
Query: 181 NSETYNKVIKSFCESG---DSSSVYSILAEMRRK--------SIRPNATDFGLLLAGFYK 229
+ T + ++ C++G D+ ++ ++ + ++ + P+ + +L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K+ + ++ + M GI Y+ I LCK R +EA + D M S+ PN+ T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI+G+ K G ++ +LF M G ++ + + G AL + + +
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T+++++TGL S ++ A
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 14/320 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + ++ ++ + F +L +E+ R + N + I + + N +D A
Sbjct: 322 SP-DVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F M G ++ N L+ G +K ++ + E + G+ ++ TYN +I
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIH 438
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---- 246
F GD ++ +L EM + P+ LL G K +D ++ ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 247 -------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
G+ V YNI I L + EA+ L + M RGI P+ TY +I G K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ L+ A ++F SM + P+ F C+ G + L++ +G V + T
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 360 MKSLVTGLASISKVAEANEL 379
+L+ G + + A ++
Sbjct: 619 YITLICGFRKVGNINGALDI 638
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 139/360 (38%), Gaps = 58/360 (16%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDHAMQT 133
+S + L + + L E++ + PDL F +S+++ + + A Q
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL-----FTYNSMIVGFCSSGRWSDAEQL 312
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSF 192
+EM + + V NAL+ + + E + ++ E P+ GI PN+ TY+ +I F
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR--GIIPNTITYSSMIDGF 370
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + + M K PN F L+ G+ + +D ++L M + G+ +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLS-------------------------------- 280
YN I + A LL M+S
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 281 --------------RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
G++P++ TY LI G EG A++L+ M + G PD+ +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A ++ + +K + P+ T +L+ G +V + EL M +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I + + I I+
Sbjct: 65 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 124
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G+ P++ T+ L+HG E + A LF M C P+
Sbjct: 125 CSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + M G P T ++V G+ A L+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRK 244
Query: 383 MKK 385
M++
Sbjct: 245 MEE 247
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 15/181 (8%)
Query: 102 KTRPDLRQNERFH-------VHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNAL 152
K++ DL + F+ ++I++ G N A + +EEM G+ +++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G +E ++F PN T+ +I +C++G + EM R+
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS-LCKLKRSEEA 271
I NA + L+ GF K + Q M I+SGV I I++ L L EE
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEM----ISSGVYPDTITIRNMLTGLWSKEEL 667
Query: 272 K 272
K
Sbjct: 668 K 668
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F EM+ G++ V A ++++ G +++ ++ E I PN T++
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIG-RNIIPNVVTFS 318
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I F + G + EM + I P+ + L+ GF KE++ + ++L +M
Sbjct: 319 ALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSK 378
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y+I I S CK KR + L + S+G+ + TY L+ GF + G L A
Sbjct: 379 GCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVA 438
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+LF M + G P + + LC GE + AL++ + ++ G
Sbjct: 439 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHG 498
Query: 367 LASISKVAEANEL 379
+ + SKV +A L
Sbjct: 499 MCNASKVDDAWSL 511
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F +M++ ++ SV + ++ N ++ +F E ++ GI+ + Y+ +I
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM-EMKGIKADVVAYSSII 286
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C G +L EM ++I PN F L+ F KE K + ++ M GIA
Sbjct: 287 GGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIA 346
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y+ I CK R EA +LD M+S+G +PN+ TY LI+ + K ++ +L
Sbjct: 347 PDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRL 406
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F +++ G D+ + CQ G+ A ++ + +++G P T L+ GL
Sbjct: 407 FCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCD 466
Query: 370 ISKVAEANELIGLMKK 385
++ +A E+ M+K
Sbjct: 467 NGELQKALEIFEKMQK 482
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 118/248 (47%), Gaps = 1/248 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + N + A Q + M G ++ + L+ +K + R+F E G+
Sbjct: 359 FCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISS-KGLVA 417
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +++ FC+SG + + EM + + P+ +G+LL G + + ++
Sbjct: 418 DTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF 477
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+K + G+ +YNI I +C + ++A +L + +G+KP++ TY +I G K+
Sbjct: 478 EKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G+L A LF M GC P + + G +++++ +G+ ST+
Sbjct: 538 GSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTI 597
Query: 361 KSLVTGLA 368
K +V L+
Sbjct: 598 KMVVVMLS 605
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 5/294 (1%)
Query: 93 AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
A+ + E+K RP++ ++ + L G+ + A+ + M KYG + +
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTL-INGLCLKGR---VTEALVLIDRMVKYGCEANEITYGPV 215
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
L S N +F + + I+ + Y+ VI S C+ G+ S+ EM K
Sbjct: 216 LNRMCKSGNTALALDLFRKMEE-RSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
I+ + + ++ G + +++D K+L+ M I V ++ I K + EAK
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L + M++RGI P+ TY LI GF KE L A ++ M + GCEP+ + +
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ + +++ +KG V T +LV G K+ A EL M R
Sbjct: 395 CKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR 448
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 11/264 (4%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-----YGIEPNS 182
D + +EMD G+ ++ +N +++ C K +++ F V +G EPN+
Sbjct: 86 DLVLGFCKEMDLNGIEHNMYTMN-IMINCFCRK-----RKLLFAFSVVGRALKFGFEPNT 139
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T++ +I FC G S +++ M RPN L+ G + + + ++
Sbjct: 140 ITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDR 199
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M K G + Y + +CK + A L M R IK ++ Y +I K+GN
Sbjct: 200 MVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+ A LF M G + D + LC G ++ K+ R + + +P+ T +
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ K+ EA EL M R
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVAR 343
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 106/267 (39%), Gaps = 12/267 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL--YGQANMID 128
D + +S + + N +Q+L+ + ++ P++ +SI++ Y +A +D
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNI------VTYSILINSYCKAKRVD 401
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+ M+ F E+ GL N L+ G S K +F E G+ P+ TY +
Sbjct: 402 NGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVS-RGVPPSVVTYGIL 460
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ C++G+ I +M++ + + +++ G K +D + + G+
Sbjct: 461 LDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGV 520
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V YN+ I LCK EA L M G P+ TY LI + + +
Sbjct: 521 KPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVE 580
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQG 335
L M G D+ M L G
Sbjct: 581 LIEEMKMRGFAADASTIKMVVVMLSDG 607
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 78/220 (35%), Gaps = 36/220 (16%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ FE M + S+ + L K Y+ V E + GIE N T N
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEM-DLNGIEHNMYTMN 108
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC +S++ + PN F L+ GF
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGF------------------- 149
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
C R EA AL+D M+ +PN+ T LI+G +G + A
Sbjct: 150 ----------------CLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA 193
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
L M GCE + + +C+ G AL + R
Sbjct: 194 LVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFR 233
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 141/319 (44%), Gaps = 12/319 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ F+ ++ L +A F +L +++ R PD+ + ++ ++ G M + A
Sbjct: 162 ITFTTLINGLCKAGEFAQALELFDDMVARGCQPDV------YTYTTIINGLCKMGETAAA 215
Query: 133 T--FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++M + G + V + L+ + E IF+ + K GI P +Y +I+
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFS-YMKAKGISPTVVSYTSLIQ 274
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C ++L EM +I P+ F LL+ F KE + VL+ M + G+
Sbjct: 275 GLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP 334
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN + EA+ L D M++RG KP++ +Y LI+G+ ++ AK+LF
Sbjct: 335 NVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLF 394
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G P++ + + CQ G+ A ++ + G++P T L+ G
Sbjct: 395 NEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQ 454
Query: 371 SKVAEANELIGLMKKRFPK 389
+ +A L M+ + K
Sbjct: 455 GYLGKAFRLFRAMQGTYLK 473
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 1/254 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+++ A+ F M G+ +V + +L+ G ++E + E + I P+ T+
Sbjct: 246 LVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL-NIMPDIVTF 304
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ +I FC+ G+ +L M + PN + L+ G+ + + + K+ +M
Sbjct: 305 SLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMIT 364
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y+I I C +KR +EAK L + M+ +G+ PN +Y LIH F + G L
Sbjct: 365 RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLRE 424
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A++LF M G PD + + C+ G A ++ RA P+ L+
Sbjct: 425 ARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILID 484
Query: 366 GLASISKVAEANEL 379
+ + A +L
Sbjct: 485 SMCKSGNLNHARKL 498
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 130/285 (45%), Gaps = 10/285 (3%)
Query: 74 DRMAFSIAVSKLSQANHF---NAISQLLEELKTRPD-LRQNERFHVHSIVLYGQANMIDH 129
D + FS+ + + + + + + E+ P+ + N H +S+ Q +++
Sbjct: 300 DIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSL----QMEVVE- 354
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+ M G + V + + L+ G + K +E K++F E G+ PN+ +Y +I
Sbjct: 355 ARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIH-QGLTPNTVSYTTLI 413
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+FC+ G + +M P+ + +LL GF K+ ++ + M+ +
Sbjct: 414 HAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLK 473
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y I I S+CK A+ L + G++P++ Y +I+G KEG L+ A +
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEA 533
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F M GC P+ + + + Q + A+++ KG+V
Sbjct: 534 FRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 134/311 (43%), Gaps = 2/311 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++++ + L + + S +L E+ + + F + + + N+++ A +
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLE-AQGVLK 325
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M + G+ +V N+L+ G L E +++F + G +P+ +Y+ +I +C
Sbjct: 326 TMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLF-DVMITRGCKPDVFSYSILINGYCMV 384
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ EM + + PN + L+ F + K + ++ + M G + Y
Sbjct: 385 KRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTY 444
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
++ ++ CK +A L M +KPNL Y LI K GNL A+KLF+ +
Sbjct: 445 SVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFV 504
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G +PD + LC+ G + AL+ R G P+ + ++ G +
Sbjct: 505 HGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESR 564
Query: 376 ANELIGLMKKR 386
A +LIG M+ +
Sbjct: 565 AVQLIGEMRDK 575
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 5/261 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETY 185
D + ++M+ GL + LN +L+ C + ++ F+ KV G++P T+
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLN-ILINCFCLMQHVDLG--FSVLAKVIKLGLQPTIITF 164
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I C++G+ + + +M + +P+ + ++ G K + +++ M +
Sbjct: 165 TTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE 224
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y+ I SLCK + EA + M ++GI P + +Y LI G +
Sbjct: 225 VGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKE 284
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A + MT+ PD F + C+ G A V + G P+ T SL+
Sbjct: 285 ASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMH 344
Query: 366 GLASISKVAEANELIGLMKKR 386
G + +V EA +L +M R
Sbjct: 345 GYSLQMEVVEARKLFDVMITR 365
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 2/180 (1%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYED-VGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
+ RK + P F LL+ + +Y D V + + ME G++ NI I C ++
Sbjct: 82 LHRKPL-PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQ 140
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ ++L ++ G++P + T+ LI+G K G A +LF M GC+PD Y +
Sbjct: 141 HVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYT 200
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ GE A + + G P T +L+ L V EA ++ MK +
Sbjct: 201 TIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAK 260
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 103/259 (39%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A+ +F M + N LL + + Y + ++ ++ G+ PN+ T N
Sbjct: 71 IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC +S+LA++ + ++P F L+ G K ++ ++ M
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V Y I LCK+ + A L+ M G +P++ TY LI K+ + A
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+F+ M G P + LC ++ A + + +P T L+
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310
Query: 367 LASISKVAEANELIGLMKK 385
V EA ++ M +
Sbjct: 311 FCKEGNVLEAQGVLKTMTE 329
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 149/385 (38%), Gaps = 73/385 (18%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+F + + LS+ N + Q LEELK+ + F V I Y + + + A+++F
Sbjct: 94 SFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVL-ISAYAKMGLAEKAVESFGR 152
Query: 137 MDKYGLRQSVDALNALL--------------------LGCILSKNY-------------- 162
M ++ R V N +L L C S N
Sbjct: 153 MKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 163 --EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+ +++F + GI PN TY +I C+ G + EM+ P++
Sbjct: 213 RTSDAQKMFDDMTG-RGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAH 271
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
LL GF K + + ++L++ EK G G+ Y+ I L + +R +A L ML
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
R IKP++ Y LI G K G +E A KL SM + G PD+YC+ LC G E
Sbjct: 332 RNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEE 391
Query: 341 A-----------------------LKVCRASMAK------------GWVPHFSTMKSLVT 365
+CR + + G P +T +L+
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALID 451
Query: 366 GLASISKVAEANELIGLMKKRFPKS 390
GL ++ EA L+ M+ P S
Sbjct: 452 GLCKSGELKEARLLLHKMEVGRPAS 476
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 141/368 (38%), Gaps = 49/368 (13%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDL-- 107
S+ ++ D G ++P +R+ ++I +S L Q +L E+K PD
Sbjct: 215 SDAQKMFDDMTGRGISP----NRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVA 270
Query: 108 ------------RQNERFHVHSIV--------LYGQANMID---------HAMQTFEEMD 138
R E F + + L G +++ID A + + M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K ++ + L+ G + E+ ++ P GI P++ YN VIK+ C G
Sbjct: 331 KRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPS-KGITPDTYCYNAVIKALCGRGLL 389
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
S+ EM P+A +L+ + ++ +EK G + V +N
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNAL 449
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG-------FGKEGNLEGAKKLFA 311
I LCK +EA+ LL M + + L H + G++ A K A
Sbjct: 450 IDGLCKSGELKEARLLLHKM---EVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLA 506
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ G PD + + C+ G+ + ALK+ KG P T +L+ GL +
Sbjct: 507 HFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG 566
Query: 372 KVAEANEL 379
+ EA +L
Sbjct: 567 REEEAFKL 574
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 147 DALNALLLGCILSKN--YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
DA +L C + +N + + IF E K G P+ T+N +I C+SG+ +
Sbjct: 407 DACTHTILICSMCRNGLVRKAEEIFLEIEKS-GCSPSVATFNALIDGLCKSGELKEARLL 465
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK------CGIASGVNVYNIR 258
L +M + RP + L +G G +L+ + G + + YN+
Sbjct: 466 LHKM--EVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVL 523
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I C+ + A LL+ + +G+ P+ TY LI+G + G E A KLF + +
Sbjct: 524 INGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRH 583
Query: 319 EPDSY 323
P Y
Sbjct: 584 SPAVY 588
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 140/306 (45%), Gaps = 6/306 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S+ ++ L + FN + +L+E + NE + I Y + + A++
Sbjct: 384 ITYSVLINGLMKLEKFNEANSVLKETLEK-GFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSFCE 194
+M G+ + LN+++ G E+ + I E + + I P + + +I C
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA--FTTIIHWLCM 500
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV-LQMMEKCGIASGVN 253
+ S L EM +++RPN L+ G KE K+ D ++ +++EK G + +
Sbjct: 501 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK-GFGANLV 559
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
N I LCK +EA LL ML RG + TY LI G KEG +E KL M
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 619
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G EPD++ + + + +C+ G+ + A+ + ++ VP+ T ++ G K+
Sbjct: 620 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 679
Query: 374 AEANEL 379
E +L
Sbjct: 680 EEGEKL 685
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 11/270 (4%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSV----DALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
+AN ++ + FE M + G+ V A+NA G E+ ++F + K+ G+
Sbjct: 291 KANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKG----GKVEDAIQLFFDMEKL-GV 344
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN TYN +I C+ G+ + +M + + + +L+ G K K+ +
Sbjct: 345 SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANS 404
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
VL+ + G VYN I CK+ +A + M+S+GI PN T +I GF
Sbjct: 405 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 464
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G +E A+ + M + G + F ++LC +E+AL+ R + + P+
Sbjct: 465 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 524
Query: 359 TMKSLVTGLASISKVAEANEL-IGLMKKRF 387
+ +LV GL K ++A EL L++K F
Sbjct: 525 LLTTLVGGLCKEGKHSDAVELWFRLLEKGF 554
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++++++G + +D A+ + E L +V ++ G + EE +++FTE
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTEL- 689
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+E NS YN +I+++C +G++ + + +MR K I P + L+ G +
Sbjct: 690 LTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 749
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
ED ++ M K G+ V Y I CKL + ++ +L M S I PN TY +
Sbjct: 750 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 809
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
I G+ K G+++ A KL M G PD+ + + T C+ G+ E
Sbjct: 810 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A++ ++M + G N L+ GC EE ++ E K GIEP++ TYN
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK-QGIEPDTFTYN 632
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G ++ E + + + PN +G+++ G+ K K E+ K+ +
Sbjct: 633 LLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 692
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ VYN I++ C+ + EA L D M S+GI P TY LIHG G +E A
Sbjct: 693 NLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDA 752
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K L M G P+ C+ C+ G+ + + V + + P+ T ++ G
Sbjct: 753 KCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDG 812
Query: 367 LASISKVAEANELI 380
+ + A +L+
Sbjct: 813 YSKSGDMKTAAKLL 826
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 3/259 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A++ EM +R + L L+ G C K+ + V+ F K +G N T N
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFG--ANLVTTN 562
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++G+ +L +M + + + L++G KE K E+ K+ M K
Sbjct: 563 ALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ 622
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI YN+ I +C++ + +EA L + SR + PN+ TY +I G+ K +E
Sbjct: 623 GIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEG 682
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+KLF + E +S + C+ G A K+ +KG P +T SL+ G
Sbjct: 683 EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHG 742
Query: 367 LASISKVAEANELIGLMKK 385
+ +I ++ +A LI M+K
Sbjct: 743 MCNIGRMEDAKCLIDEMRK 761
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 134/351 (38%), Gaps = 43/351 (12%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQL---LEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
D FS A++ + QL +E+L P++ +H + +G +D A
Sbjct: 312 DVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNL-IHGLCKHGN---LDEA 367
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ E+M K G+ ++ + L+ G + + + E + E + G PN YN +I
Sbjct: 368 FRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE-KGFTPNEVVYNTLID 426
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C+ G+ I +M K I PN+ ++ GF K + E +L+ M G +
Sbjct: 427 GYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI 486
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------------------------ 286
+ I LC R E A L ML R ++PN
Sbjct: 487 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 546
Query: 287 -----------LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
L T LIHG K GN++ A +L M G D + C+
Sbjct: 547 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 606
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ E K+ + +G P T L+ G+ I K+ EA L K R
Sbjct: 607 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 657
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 7/310 (2%)
Query: 79 SIAVSKLSQANHFNAISQLLEELK--TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ +S L +AN + E ++ PD+ +I + + ++ A+Q F +
Sbjct: 283 TFLLSSLVKANELEKSYWVFETMRQGVSPDVY----LFSTAINAFCKGGKVEDAIQLFFD 338
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M+K G+ +V N L+ G N +E R F E G+ TY+ +I +
Sbjct: 339 MEKLGVSPNVVTYNNLIHGLCKHGNLDEAFR-FKEKMVKDGVNATLITYSVLINGLMKLE 397
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ S+L E K PN + L+ G+ K D ++ M GI N
Sbjct: 398 KFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLN 457
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
IQ CK+ + E+A+ +L+ MLSRG N + +IH E A + M
Sbjct: 458 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 517
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
P+ LC+ G++ A+++ + KG+ + T +L+ GL + EA
Sbjct: 518 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 577
Query: 377 NELIGLMKKR 386
L+ M +R
Sbjct: 578 VRLLKKMLER 587
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 11/248 (4%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + + +A+ +L EL T+ +L N + I Y + A + ++
Sbjct: 665 TYGVMIDGYCKADKIEEGEKLFTELLTQ-NLELNSVVYNTLIRAYCRNGNTVEAFKLHDD 723
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G+ + ++L+ G E+ K + E K G+ PN Y +I +C+ G
Sbjct: 724 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRK-EGLLPNVVCYTALIGGYCKLG 782
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
V ++L EM I PN + +++ G+ K + K+L M GI YN
Sbjct: 783 QMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYN 842
Query: 257 IRIQSLCKLKRSEEAKALL-DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
+ CK + EE K L DG+ G L + +L AKK FA+ TN
Sbjct: 843 VLTNGFCKEGKIEEGKLLAEDGV---GFNSPLFLIHEAFRACTRRVDL-WAKKFFANYTN 898
Query: 316 GGCEPDSY 323
P SY
Sbjct: 899 ----PSSY 902
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 7/307 (2%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
LD ++ V Q F +S+L E+ T P++ + I + +
Sbjct: 218 LDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVN----YTAWIDGLCKRAYVKQ 273
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A EEM GL+ +V +L+ G E R+F + K +PN TY +I
Sbjct: 274 AFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 333
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ G + +L M + + PN + L++G KE + +++ M + G
Sbjct: 334 GGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQ 393
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I LCK + +EA +L ++G++ + TY +I K+G++ A L
Sbjct: 394 PNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDL 453
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M GC PD + + CQ + E + K+ +A VP T S++ G
Sbjct: 454 FNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCK 513
Query: 370 ISKVAEA 376
+ K A
Sbjct: 514 VGKSTSA 520
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 152/341 (44%), Gaps = 27/341 (7%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS-------- 117
+LAP+ + +A+S L+ + A +L L +R D+R R +V +
Sbjct: 55 ALAPDDAI------VALSSLADSAGSAAALELFRRLASRQDVRHLMRLYVTAATTFVDRG 108
Query: 118 ------------IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
+ + +A + A EM +GL V+ N +L + + ++
Sbjct: 109 SLPMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYA 168
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+++F G+ P++ ++ +I C G V ++L M+ + + +++
Sbjct: 169 RKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVR 228
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
F ++ ++ DV ++ + M + G V Y I LCK ++A +L+ M+++G+KP
Sbjct: 229 VFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKP 288
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC-EPDSYCFFMFTYFLCQGGEYETALKV 344
N+ T+ LI+G K G E A +LF + +P+ + + + C+ G+ A +
Sbjct: 289 NVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEML 348
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ +G P+ +T +L++G A EL+ M++
Sbjct: 349 LGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRR 389
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +PN TYN +I C+ G Y +L + ++ + + +++ K+
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M + G ++ Y I C+ ++ EE++ L D L+ + P TY +I G
Sbjct: 451 LDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAG 510
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K G A ++F M GC+ DS + LC+ E A + + K VP
Sbjct: 511 YCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPC 570
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L K A ++ + KR
Sbjct: 571 EVTPVTLAFEYCRREKAVVAVSILDRLDKR 600
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
AL+ G + EE + V G EPN Y+ +I FC++G + + +M
Sbjct: 614 ALVDGLCKANRVEEAHELLDTM-SVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+ PN + L+ +KE + + V KVL M + V +Y I LCK+ ++EE
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L+ M G PN+ TY +I GFGK G +E +L+ M + GC P+ + +
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLIN 792
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
C G + A ++ W H S+ + ++ G
Sbjct: 793 HCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF 829
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 22/324 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D +S + L A+ L EE+K + + ++I++ + +A +I A
Sbjct: 452 DDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV---PSVYTYTILIDSFCKAGLIQQAR 508
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
F+EM + +V +L+ + ++ + ++F E + G +PN TY +I
Sbjct: 509 NWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF-EMMLLEGSKPNVVTYTALIDG 567
Query: 192 FCESGDSSSVYSILAEMR----------------RKSIRPNATDFGLLLAGFYKEHKYED 235
C++G I A M+ PN +G L+ G K ++ E+
Sbjct: 568 HCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEE 627
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++L M G VY+ I CK + E A+ + M RG PNL TY LI+
Sbjct: 628 AHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLIN 687
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
KE L+ K+ + M C P+ + LC+ G+ E A ++ G P
Sbjct: 688 SLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYP 747
Query: 356 HFSTMKSLVTGLASISKVAEANEL 379
+ T +++ G I K+ + EL
Sbjct: 748 NVITYTAMIDGFGKIGKIEQCLEL 771
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 158/397 (39%), Gaps = 48/397 (12%)
Query: 25 SLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPES--PLDRM------ 76
SL AG AL++ EK+ + R++ C ASL E+ LDRM
Sbjct: 249 SLCKAGRCGDALSLLEKEEFVPDTVFYN----RMVSGLCEASLFQEAMDILDRMRSISCI 304
Query: 77 ----AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHA 130
+ I +S ++L + T E F+ VH+ Y ++ +A
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHA---YCKSRDYSYA 361
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKN-------YEEVKRIFTEFPKVYGIEPNSE 183
+ F++M K G + N + +G I S E ++ ++E + G+ N
Sbjct: 362 YKLFKKMIKCGCQPGYLLYN-IFIGSICSNEELPGSDLLELAEKAYSEMLDL-GVVLNKV 419
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
+ + C +G + I+ EM K P+ + + ++ K E + + M
Sbjct: 420 NVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEM 479
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+K GI V Y I I S CK ++A+ D ML PN+ TY LIH + K +
Sbjct: 480 KKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKV 539
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW---------- 353
A KLF M G +P+ + C+ G+ + A ++ A M
Sbjct: 540 FDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQI-YARMQGDIESSDIDMYFK 598
Query: 354 -------VPHFSTMKSLVTGLASISKVAEANELIGLM 383
P+ T +LV GL ++V EA+EL+ M
Sbjct: 599 LDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTM 635
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 115/276 (41%), Gaps = 14/276 (5%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I ++ +A+ +D A EM G R ++ LGC + + + R +
Sbjct: 212 IQVFLRADKLDTAFLVHREMSNSGFR-----MDGCTLGC-FAYSLCKAGRCGDALSLLEK 265
Query: 178 IE--PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
E P++ YN+++ CE+ IL MR S PN + +LL+G + +
Sbjct: 266 EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGR 325
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++L MM G ++N + + CK + A L M+ G +P Y I
Sbjct: 326 CKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIG 385
Query: 296 GFGKEGNLEG------AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
L G A+K ++ M + G + F LC G+++ A ++ M
Sbjct: 386 SICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMM 445
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+KG+VP ST ++ L SKV +A L MKK
Sbjct: 446 SKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKK 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 130/343 (37%), Gaps = 53/343 (15%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
LLE+ + PD F+ + +A++ AM + M +V LL GC
Sbjct: 262 LLEKEEFVPD----TVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGC 317
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP- 215
+ KRI + G PN E +N ++ ++C+S D S Y + +M + +P
Sbjct: 318 LGKGQLGRCKRILSMM-MTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPG 376
Query: 216 -------------------------------------------NATDFGLLLAGFYKEHK 232
N ++F L G K K
Sbjct: 377 YLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDK 436
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
++ + +MM K G + Y+ I LC + E+A L + M GI P++ TY
Sbjct: 437 AFEI--ICEMMSK-GFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTI 493
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI F K G ++ A+ F M C P+ + + + + A K+ + +G
Sbjct: 494 LIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEG 553
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG-DMW 394
P+ T +L+ G ++ +A ++ M+ S DM+
Sbjct: 554 SKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMY 596
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 9/231 (3%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
EE+ R+ K +G + + TYN +I+ F + + + + EM R + G
Sbjct: 191 EELGRL-----KDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGC 245
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
K + G L ++EK YN + LC+ +EA +LD M S
Sbjct: 246 FAYSLCKAGR---CGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSIS 302
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
PN+ TY+ L+ G +G L K++ + M GC P+ F + C+ +Y A
Sbjct: 303 CIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAY 362
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDM 393
K+ + + G P + + + S ++ ++L+ L +K + + D+
Sbjct: 363 KLFKKMIKCGCQPGYLLYNIFIGSICSNEELP-GSDLLELAEKAYSEMLDL 412
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 5/200 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G+ I+ ++ + +M G + L+ C + +E R+ E + Y
Sbjct: 759 FGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRH 818
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
S +Y K+I+ F +S +L E+ P + + +L+ F K + E +L
Sbjct: 819 IS-SYRKIIEGFNREFITS--IGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLL 875
Query: 241 QMMEKCGIASGVN--VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ + + N +Y I+SL + ++A L M+++ + P L T+ HLI G
Sbjct: 876 EEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLT 935
Query: 299 KEGNLEGAKKLFASMTNGGC 318
+ G + A +L S+ C
Sbjct: 936 RVGKWQEALQLSDSICQMVC 955
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N IQ C+ A L + G K + TY LI F + L+ A + M+N
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G D F Y LC+ G AL + + +VP +V+GL S E
Sbjct: 234 SGFRMDGCTLGCFAYSLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQE 290
Query: 376 ANELIGLMK 384
A +++ M+
Sbjct: 291 AMDILDRMR 299
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ++HA++ FE MD +V L+ G S E +F+ + G+EP
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA-GLEP 280
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I+ C G + +L M + PN F +L+ K K E+ L
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ K G+ VY I LCK + + A L+ M+S G P+ +Y LI G ++
Sbjct: 341 GSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQ 400
Query: 301 GNL-----------------------------------EGAKKLFASMTNGGCEPDSYCF 325
L EG KK+F M G PD +
Sbjct: 401 KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTY 460
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+F C+ G E A + + +G P+ T +L+ G A++ V++A
Sbjct: 461 TVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 1/263 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A M+ HA + F M G ++ ALL G + + E +F + P
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGM-RADSCAP 175
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ Y ++ CE+G + +L E PN + L+ G+ + E KV
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ + V Y I LCK + E A L M+ G++PN+ TY LI G E
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G+L+ A +L M G P+ + F + LC+ + E A + + KG +
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 361 KSLVTGLASISKVAEANELIGLM 383
SL+ GL K+ A+EL+ M
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKM 378
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 7/333 (2%)
Query: 67 LAPESPLDRM-AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
L+P +PL + + + L++ F + L + R N R + I Y A
Sbjct: 32 LSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPAR-----NLRTYTTLINAYCLAG 86
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
I A Q + GL A + +LG + R+F P + G + TY
Sbjct: 87 DIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP-LRGCLRTAFTY 145
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ +G ++ MR S P+ + ++ G + + E+ +L+
Sbjct: 146 TALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMS 205
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + VYN I C E A + +GM PN+ TY LIHG K G +E
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF+ M G EP+ + C G + A ++ G VP+ T L+
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
L KV EA +G + K+ K ++ +L
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSL 358
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G ++ NAL+ G + E ++F E PN TY ++I C+SG
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVF-EGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ + M + PN + L+ G E + ++L +ME G+ +++ I
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+LCK ++ EEA+ L ++ +G+K N Y LI G K G ++ A +L M + G P
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
D++ + LC+ + A + M KG
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ +Y+ +I C S +L +M K I+ + + +++ +E E
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ M GI + Y + ++S C+ R E+A++++ M+ RG+ PNL TY LI G
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Query: 297 FGKEGNLEGAKKLFASMTNGGCEP--DSYCFFM 327
+ G + A F M G +P DSY +
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL------------ 224
G+ PN TYN +I+ + G S +S M K +PN + +LL
Sbjct: 487 GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNS 546
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
+K +D+ +L+ + + + ++Y+ I+ LC++ R EEAK GM + +
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606
Query: 285 PNLDTYKHLI 294
P+ D Y +I
Sbjct: 607 PSEDVYTSII 616
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/265 (19%), Positives = 105/265 (39%), Gaps = 24/265 (9%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMI 127
++ + ++ + L + +A +L++++ + PD H +S ++ G + +
Sbjct: 350 VNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA------HSYSSLIDGLCRQKKL 403
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A E+M + G++ S ++ + E K+IF + GI P+ TY
Sbjct: 404 SQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIAT-GINPDIVTYTV 462
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++S+CE G S++ +M + + PN + L+ G+ ++M G
Sbjct: 463 FVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKG 522
Query: 248 IASGVNVYNIRIQSLCKLKRSE------------EAKALLDGMLSRGIKPNLDTYKHLIH 295
+ Y + ++ + K S+ + + LL+ + R + D Y I
Sbjct: 523 WKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIR 582
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEP 320
+ LE AK F M N P
Sbjct: 583 CLCRVDRLEEAKHFFMGMQNANLTP 607
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 94/239 (39%), Gaps = 6/239 (2%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
FR+L + L P + FS+ + L + L L + ++ NE +
Sbjct: 302 FRLLHLMETNGLVP----NDWTFSVLIDALCKREKVEEAQLFLGSL-VKKGVKVNEVVYT 356
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I + ID A + ++M G + ++L+ G K + + + +
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME- 415
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI+ + TY +I S I +M I P+ + + + + +E + ED
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMED 475
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
++ M G+ + YN I+ L +A + + M+ +G KPN D+Y L+
Sbjct: 476 AESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 117/240 (48%), Gaps = 1/240 (0%)
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
+G++ N LL + + ++ +++E GI+P+ T+N ++K+ C +
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ +L EM + + P+ T F L+ GF +E E +V M + G ++ N+ I
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CKL R E+A + ++ G +P+ TY ++G + ++ A K+ M G +
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + + + LC+ G+ E A + + +G +P +T +L+ L + +++ EA +L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHV 115
LD+ ++ SP D F+I ++ L + + +L EE+K PD +
Sbjct: 376 LDLARQVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL-I 433
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
++ G+ + A+ ++M+ G +S N ++ G EE + +F + +
Sbjct: 434 DNLCSLGK---LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DL 489
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI N+ T+N +I C+ + ++ +M + ++PN + +L + K+ +
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L+ M G V Y I LCK R++ A +L GM +G++P Y ++
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWV 354
+ N+ A LF M G PD+ + + LC+ GG + A + KG++
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669
Query: 355 PHFSTMKSLVTGLASIS 371
P FS+ + L GL ++
Sbjct: 670 PEFSSFRMLAEGLLNLG 686
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 6/300 (2%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
+++D+ P D ++I V+ L + +L ++ R L F+
Sbjct: 306 LKVMDVMVQEGHDP----DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I N ++ A+ ++ G+ V N L+ + R+F E K
Sbjct: 362 -LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KN 419
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G P+ TYN +I + C G +L +M + + ++ G K+ + E+
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+V M+ GI+ +N I LCK K+ ++A L++ M+S G++PN TY ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ K+G+++ A + +MT G E D + LC+ G + ALKV R KG P
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L +A+ +LEE+ +R + +E + + + I+ A++
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M + G + +N L+ G C L + + + I E G EP+ TYN +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD--GFEPDQITYNTFVNGL 296
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++ ++ M ++ P+ + +++ K + E+ +L M G +
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I +LC R EEA L + +G+ P++ T+ LI+ K G+ A +LF
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M N GC PD + LC G+ AL + + + G T +++ GL +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 373 VAEANELIGLM 383
+ EA E+ M
Sbjct: 477 IEEAEEVFDQM 487
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 130/314 (41%), Gaps = 8/314 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D++ ++ V+ L Q +H ++++ + PD+ V+ + GQ ++ A
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF-TYNIVVNCLCKNGQ---LEEA 340
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+M G + N L+ EE + + V G+ P+ T+N +I
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-TVKGVSPDVYTFNILIN 399
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C+ GD + EM+ P+ + L+ K +L+ ME G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN I LCK R EEA+ + D M +GI N T+ LI G K+ ++ A +L
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G +P++ + C+ G+ + A + A G+ T +L+ GL
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 371 SKVAEANELIGLMK 384
+ A +++ M+
Sbjct: 580 GRTQVALKVLRGMR 593
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 146/381 (38%), Gaps = 76/381 (19%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELK---TRPDLRQNERFHVHSIVLYGQANMID 128
P + + F+ +S L + F + ++L ++ PD+R + I G +
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATI-IDGICKEGHLKV-- 315
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPK------------- 174
A + M YGL+ +V N LL G ++ +EE + + E F K
Sbjct: 316 -AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILV 374
Query: 175 --------------------VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
V+G P+ TY VI FC+ G +L M +
Sbjct: 375 DFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCK 434
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
PN + ++L G ++ D ++ M + G +N I LCK E+A L
Sbjct: 435 PNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIEL 494
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF-------- 326
L ML G P+L +Y +I G GK G + A +L M N G P++ +
Sbjct: 495 LKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSR 554
Query: 327 ---------MFTYF------------------LCQGGEYETALKVCRASMAKGWVPHFST 359
MF LC+ GE E A++ ++ G VP+ ST
Sbjct: 555 EGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNEST 614
Query: 360 MKSLVTGLASISKVAEANELI 380
L+ GLAS V EA E++
Sbjct: 615 YTILIRGLASEGFVKEAQEML 635
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 1/254 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ E++ G V N +L + ++ + + P +G EP+ +YN V+
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPS-FGCEPDVVSYNAVL 234
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K C + V ++ EM R + PN F L++ + +E V +VL M + G
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +Y I +CK + A +L+ M S G+KPN+ Y L+ G E ++L
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
A M + C D F + F CQ G + +++ + G +P T +++ G
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414
Query: 370 ISKVAEANELIGLM 383
+ EA L+ M
Sbjct: 415 EGLIDEAVMLLKSM 428
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 129/313 (41%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ + L A + + +L+EE+ R N I + + + +
Sbjct: 226 DVVSYNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEV 284
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M ++G + ++ G + + I P YG++PN YN ++K C
Sbjct: 285 LAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPS-YGLKPNVVCYNTLLKGLC 343
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ +LAEM K + F +L+ F + + V ++L+ M G V
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVI 403
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I CK +EA LL M + G KPN +Y ++ G A+ L + M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
GC + F FLC+ G E A+++ + + G P + +++ GL K
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 523
Query: 374 AEANELIGLMKKR 386
EA EL+ +M +
Sbjct: 524 DEALELLNVMVNK 536
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 8/242 (3%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
NA++ G + E +R+ P + PN+ TY V+++ C G + ++L EM
Sbjct: 94 NAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
R+ P + ++L + + +VL+ + G A V N+ + ++C +
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A LL + S G +P++ +Y ++ G ++L M C P+ F
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+LC+ G +E +V G P +++ G+ + A+E++ R P
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEIL----NRMPS 325
Query: 390 SG 391
G
Sbjct: 326 YG 327
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/301 (19%), Positives = 127/301 (42%), Gaps = 17/301 (5%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QA 124
+ PLD + F+I V Q + + +LLE++ PD+ ++ V+ G +
Sbjct: 362 DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDV------ITYTTVINGFCKE 415
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ID A+ + M G + + + +L G ++ + + + + ++ + G N T
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ-QGCPLNPIT 474
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I C+ G +L +M P+ + ++ G K K ++ ++L +M
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G++ +Y+ +L + R + + D + I+ + Y +I K G E
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG----EYETALKVC-RASMAKGWVPHFST 359
A + A M + GC P+ + + L G E ++C + ++ K + HF
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHFGI 654
Query: 360 M 360
+
Sbjct: 655 V 655
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN + C+ + E A+ L + + PN TY ++ G + A +
Sbjct: 90 VVAYNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLD 146
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
M GC P + + C+GG + +A++V A+G
Sbjct: 147 EMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG 187
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 128/269 (47%), Gaps = 8/269 (2%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FEE+ + G++ A NALL G + + ++ + + +E K G+ P+ TY+ +I ++
Sbjct: 329 FEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEK-RGVSPDEHTYSLLIDAYV 387
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G S +L EM ++PN+ F LLAG+ +++ +VL+ M+ G+
Sbjct: 388 NAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQ 447
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN+ I + K + A D MLS GI+P+ T+ LI K G A+++F +M
Sbjct: 448 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 507
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYE--TALKVCRASM-AKGWVPHFSTMKSLVTGLASI 370
GC P C + + G+ E +K M ++G +P+ T +LV
Sbjct: 508 ERRGCLP---CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 564
Query: 371 SKVAEANELIGLMKKR-FPKSGDMWNAAL 398
+ +A E + MK S M+NA +
Sbjct: 565 GRFNDAIECLEEMKSVGLKPSSTMYNALI 593
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 3/274 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +S+++ Y A + A +EM+ ++ + + LL G +++ ++ E
Sbjct: 377 HTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKE 436
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G++P+ + YN VI +F + + M + I P+ + L+ K
Sbjct: 437 M-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 495
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++ ++ + ME+ G YNI I S +R ++ K LL M S+GI PN+ T+
Sbjct: 496 RHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 555
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ +GK G A + M + G +P S + Q G E A+ R +
Sbjct: 556 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSD 615
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P + SL+ + AEA ++ MK+
Sbjct: 616 GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 649
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 8/263 (3%)
Query: 96 QLLEELKT---RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNAL 152
Q+L+E+K+ +PD +F+ I +G+ N +DHAM TF+ M G+ N L
Sbjct: 432 QVLKEMKSIGVKPD----RQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 487
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ C V E + G P + TYN +I S+ + + +L +M+ +
Sbjct: 488 I-DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 546
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
I PN L+ + K ++ D + L+ M+ G+ +YN I + + SE+A
Sbjct: 547 ILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAV 606
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
M S G+KP+L LI+ FG++ A + M G +PD + L
Sbjct: 607 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKAL 666
Query: 333 CQGGEYETALKVCRASMAKGWVP 355
+ +++ V + G P
Sbjct: 667 IRVDKFQKVPGVYEEMIMSGCKP 689
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 133/324 (41%), Gaps = 41/324 (12%)
Query: 102 KTRPDLRQNERFHVHSIVLYG--QANMIDHAM--QTFEEMDKYGLRQSVDALNALLLGCI 157
+ R D Q++ F +S+V+ + N ID M + ++E+++ L V +N +++G
Sbjct: 224 RMRQDGYQSD-FVNYSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFA 282
Query: 158 LSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
S + ++ + G+ + T +I + SG + ++ E+R+ I+P
Sbjct: 283 KSGDPSRALQLLG-MAQATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRT 341
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ LL G+ K +D ++ MEK G++ + Y++ I + R E A+ +L
Sbjct: 342 KAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKE 401
Query: 278 M-----------LSR------------------------GIKPNLDTYKHLIHGFGKEGN 302
M SR G+KP+ Y +I FGK
Sbjct: 402 METGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNC 461
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L+ A F M + G EPD + C+ G + A ++ A +G +P +T
Sbjct: 462 LDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNI 521
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
++ + + L+G MK +
Sbjct: 522 MINSYGDQERWDDMKRLLGKMKSQ 545
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 144/322 (44%), Gaps = 20/322 (6%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV---------HSIVLYGQA 124
D++ ++ V LS+ H + + L E + R RF V HS G+
Sbjct: 309 DQVTYNTFVHMLSKHGHGDEALEFLREAEER-------RFRVDKVGYSAIVHSFCREGR- 360
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+D A + EM G V +++ G + ++ K++ + K +G +PN+ +
Sbjct: 361 --MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK-HGCKPNTVS 417
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y ++ C++G+S ++ PNA + +L+ GF +E K + +++ M
Sbjct: 418 YTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMI 477
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
K G N+ IQSLC+ ++ +EAK ++ L+ G N+ + +IHGF ++ +LE
Sbjct: 478 KKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLE 537
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A L M PD + L + G E A K+ + GW+P T ++++
Sbjct: 538 AALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVI 597
Query: 365 TGLASISKVAEANELIGLMKKR 386
+ +V + +L+ M R
Sbjct: 598 HQYCRMGRVEDLLKLLEKMLSR 619
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 136/310 (43%), Gaps = 3/310 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + + + LS+ ++L + R R+ E F + +V Y +A + +AM+
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFG-YVMVSYSRAGKLRNAMRX 191
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M K G+ + N + ++ ++ R F E ++ I PN TYN +IK +C
Sbjct: 192 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR-FLERMQIVEIXPNVITYNCLIKGYC 250
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ-MMEKCGIASGV 252
+ ++AEM K P+ + ++ KE + +++ +++ M++ +
Sbjct: 251 DLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQ 310
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN + L K +EA L R + + Y ++H F +EG ++ AK++
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 370
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + GC PD + LCQ + + A K+ R G P+ + +L+ GL
Sbjct: 371 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 430
Query: 373 VAEANELIGL 382
EA E++ +
Sbjct: 431 SLEAREMMNM 440
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 93/221 (42%)
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
K +E++ + + K + P+ TYN + + G L E + R +
Sbjct: 288 KRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVG 347
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ ++ F +E + + +++ M G V Y I LC+ ++ ++AK +L M
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
G KPN +Y L++G K GN A+++ P++ + + + + G+
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSS 467
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
A + R + KG+ P + L+ L KV EA +
Sbjct: 468 EACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 508
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 1/223 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GIEP+ N I L M+ I PN + L+ G+ H+ ED
Sbjct: 199 GIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDA 258
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML-SRGIKPNLDTYKHLIH 295
+++ M G + Y + LCK KR +E + L++ ML + P+ TY +H
Sbjct: 259 XELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVH 318
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
K G+ + A + D + + C+ G + A ++ +KG +P
Sbjct: 319 MLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP 378
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
T S++ GL KV +A +++ M K K + AL
Sbjct: 379 DVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTAL 421
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 87/242 (35%), Gaps = 36/242 (14%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+S++++G + A EM K G + +N L+ + +E KR F E
Sbjct: 452 TYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKR-FMEQ 510
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
G N + VI FC+ D + S+L +M + P+ + ++ K+ +
Sbjct: 511 CLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGR 570
Query: 233 YEDVGKVLQMMEKCG-IASGVN--------------------------------VYNIRI 259
E+ K+ M + G I + V YN I
Sbjct: 571 IEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVI 630
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
+ LC E+A LL +L K + +T LI + +G + + M N
Sbjct: 631 EKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLI 690
Query: 320 PD 321
PD
Sbjct: 691 PD 692
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 8/279 (2%)
Query: 114 HVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
H SIV +G + + + A+ F++M G + +V N ++ G SK +
Sbjct: 147 HEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+ K GI P+ TYN +I C SG S +++ M ++ I P+ F L+
Sbjct: 207 DLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
KE + + + + M + + + Y++ I LC R +EA+ + M+S+G P+
Sbjct: 266 CVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPD 325
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ TY LI+G+ K +E KLF M+ G ++ + + C+ G+ A ++ R
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR 385
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ G P+ T L+ GL K+ +A ++ M+K
Sbjct: 386 RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
++ +D+A+ M+K G+ V N+L+ G S + + R+ + K I P+
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK-REIYPDV 256
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N +I + + G S EM R+S+ P+ + LL+ G + ++ ++
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G V Y+I I CK K+ E L M RG+ N TY LI G+ + G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L A+++F M G P+ + + + LC G+ E AL + G T
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 363 LVTGLASISKVAEANEL 379
++ G+ +VA+A ++
Sbjct: 437 IIRGMCKAGEVADAWDI 453
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 111/264 (42%), Gaps = 3/264 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D ++ F M + S+ + LL K Y+ V ++ + ++ GI N T N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCN 120
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC S S L +M + P+ FG LL GF + + D + M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V +YN I LCK K+ + A LL+ M GI P++ TY LI G G A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ + MT PD + F + G A + + + P T L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 367 LASISKVAEANELIGLM--KKRFP 388
L S++ EA E+ G M K FP
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFP 324
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 1/249 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K + V NAL+ C+ E + + E + ++P+ TY+ +I C
Sbjct: 247 MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR-RSLDPDIVTYSLLIYGLCMYS 305
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ M K P+ + +L+ G+ K K E K+ M + G+ Y
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I IQ C+ + A+ + M+ G+ PN+ TY L+HG G +E A + A M
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN 425
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G + D + + +C+ GE A + + +G +P T +++ GL EA
Sbjct: 426 GMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 377 NELIGLMKK 385
+ L MK+
Sbjct: 486 DALFRKMKE 494
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 107/259 (41%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D + +E+M G+ ++ N +LL C + + F G EP+ T+
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCN-ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGS 156
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC + +M +PN + ++ G K + ++ +L MEK G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V YN I LC R +A ++ M R I P++ T+ LI KEG + A+
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ + M +PD + + Y LC + A ++ ++KG P T L+ G
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 368 ASISKVAEANELIGLMKKR 386
KV +L M +R
Sbjct: 337 CKSKKVEHGMKLFCEMSQR 355
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 6/217 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + +EEM + L + + L+ G + +E + +F F G P+ TY+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG-FMVSKGCFPDVVTYS 330
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+S + EM ++ + N + +L+ G+ + K ++ + M C
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + YN+ + LC + E+A +L M G+ ++ TY +I G K G + A
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
++ S+ G PD ++TY G Y+ L+
Sbjct: 451 WDIYCSLNCQGLMPD-----IWTYTTMMLGLYKKGLR 482
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQA--NMID 128
D F+ + + + + EE+ R PD+ +S+++YG + +D
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV------TYSLLIYGLCMYSRLD 308
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F M G V + L+ G SK E ++F E + G+ N+ TY +
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ-RGVVRNTVTYTIL 367
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I+ +C +G + I M + PN + +LL G K E +L M+K G+
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + YNI I+ +CK +A + + +G+ P++ TY ++ G K+G A
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487
Query: 309 LFASMTNGGCEPD 321
LF M G P+
Sbjct: 488 LFRKMKEDGILPN 500
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 7/315 (2%)
Query: 72 PLDRMA-FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMID 128
PL +A FS +S +S+ ++ + L E+++ L +I+L + + + +
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM---LGIPHNLCTCNILLNCFCRCSQLS 133
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ +M K G + +LL G + +F ++ G EPN YN +
Sbjct: 134 LALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM-GYEPNVVIYNTI 192
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+S + +L M IRP+A + L++G +++D +++ M K I
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI 252
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V +N I + K R EA+ L + M+ R + P++ TY LI+G L+ A++
Sbjct: 253 YPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQ 312
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+F M + GC PD + + C+ + E +K+ +G V + T L+ G
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYC 372
Query: 369 SISKVAEANELIGLM 383
K+ A E+ M
Sbjct: 373 RAGKLNVAEEIFKWM 387
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 8/279 (2%)
Query: 114 HVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
H IV +G + + I A+ F+ M + G +V N ++ G SK +
Sbjct: 147 HEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNAL 206
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+ +V GI P++ TYN +I C SG +++ M ++ I P+ F L+
Sbjct: 207 DLLNRM-EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
KE + + ++ + M + + + Y++ I LC R +EA+ + M+S+G P+
Sbjct: 266 CVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPD 325
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+ TY LI+G+ K +E KLF M+ G ++ + + C+ G+ A ++ +
Sbjct: 326 VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFK 385
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ G P+ T L+ GL K+ +A ++ M+K
Sbjct: 386 WMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQK 424
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 1/257 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
++ +D+A+ M+ G+R N+L+ G S +++ R+ + K I P+
Sbjct: 198 KSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTK-REIYPDV 256
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N +I + + G S + EM R+S+ P+ + LL+ G + ++ ++
Sbjct: 257 FTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGF 316
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G V Y+I I CK K+ E L M RG+ N TY LI G+ + G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGK 376
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L A+++F M G P+ + + + LC G+ E AL + G T
Sbjct: 377 LNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNI 436
Query: 363 LVTGLASISKVAEANEL 379
++ G+ +VA+A +L
Sbjct: 437 IIRGMCKAGEVADAWDL 453
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 1/258 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + M K + V NAL+ C+ E + ++ E + ++P+ TY+
Sbjct: 238 DDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIR-RSLDPDIVTYSL 296
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C + M K P+ + +L+ G+ K K E K+ M + G
Sbjct: 297 LIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ Y + IQ C+ + A+ + M+ G+ PN+ TY L+HG G +E A
Sbjct: 357 VVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKAL 416
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ A M G + D + + +C+ GE A + + KG P T +++ GL
Sbjct: 417 VILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGL 476
Query: 368 ASISKVAEANELIGLMKK 385
EA+ L MK+
Sbjct: 477 YKKGLRGEADALFRKMKE 494
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 105/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D + +E+M G+ ++ N +LL C + + F G EP+ T+
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCN-ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGS 156
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC + M PN + ++ G K + ++ +L ME G
Sbjct: 157 LLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDG 216
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I YN I LC R ++A ++ M R I P++ T+ LI KEG + A+
Sbjct: 217 IRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAE 276
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L+ M +PD + + Y LC + A ++ ++KG P T L+ G
Sbjct: 277 ELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGY 336
Query: 368 ASISKVAEANELIGLMKKR 386
KV +L M +R
Sbjct: 337 CKSKKVEHGMKLFCEMSQR 355
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 13/273 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ +S L + ++ ++++ + R PD+ + + V G+ I A
Sbjct: 220 DAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNAL-IDACVKEGR---ISEA 275
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +EEM + L + + L+ G + +E +++F F G P+ TY+ +I
Sbjct: 276 EELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFG-FMVSKGCFPDVVTYSILIN 334
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C+S + EM ++ + N + +L+ G+ + K ++ + M CG+
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPP 394
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN+ + LC + E+A +L M G+ ++ TY +I G K G + A L+
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLY 454
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
S+ G PD ++TY G Y+ L+
Sbjct: 455 CSLNLKGLTPD-----IWTYTAMMLGLYKKGLR 482
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 12/253 (4%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQA--NMID 128
D F+ + + + +L EE+ R PD+ +S+++YG + +D
Sbjct: 255 DVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIV------TYSLLIYGLCMYSRLD 308
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A Q F M G V + L+ G SK E ++F E + G+ N+ TY +
Sbjct: 309 EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ-RGVVRNTVTYTVL 367
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I+ +C +G + I M + PN + +LL G K E +L M+K G+
Sbjct: 368 IQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + YNI I+ +CK +A L + +G+ P++ TY ++ G K+G A
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADA 487
Query: 309 LFASMTNGGCEPD 321
LF M G P+
Sbjct: 488 LFRKMKEDGILPN 500
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ DF LL+ K KY+ V + + M+ GI + NI + C+ + A +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L M+ G +P++ T+ L++GF + + A +F M G EP+ + LC+
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + AL + G P T SL++GL + + +A ++ M KR
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKR 250
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 97/260 (37%), Gaps = 36/260 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D ++ F M + S+ + LL K Y+ V ++ + ++ GI N T N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCN 120
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ FC S S L +M + P+ FG LL GF
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGF------------------- 161
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
C+ R +A + D M+ G +PN+ Y +I G K ++ A
Sbjct: 162 ----------------CRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNA 205
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G PD+ + LC G ++ A ++ + P T +L+
Sbjct: 206 LDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDA 265
Query: 367 LASISKVAEANELIGLMKKR 386
+++EA EL M +R
Sbjct: 266 CVKEGRISEAEELYEEMIRR 285
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 69/168 (41%)
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+D+ +L + K +D + M +C + ++ + ++ K+K+ + L +
Sbjct: 46 GSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWE 105
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M GI NL T L++ F + L A M G EPD F C+G
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGD 165
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
AL + + G+ P+ +++ GL +V A +L+ M+
Sbjct: 166 RIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ++HA++ FE MD +V L+ G S E +F+ + G+EP
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA-GLEP 280
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I+ C G + +L M + PN F +L+ K K E+ L
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ K G+ VY I LCK + + A L+ M+S G P+ +Y LI G ++
Sbjct: 341 GSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQ 400
Query: 301 GNL-----------------------------------EGAKKLFASMTNGGCEPDSYCF 325
L EG KK+F M G PD +
Sbjct: 401 KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTY 460
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+F C+ G E A + + +G P+ T +L+ G A++ V++A
Sbjct: 461 TVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 1/263 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A M+ HA + F M G ++ ALL G + + E +F + P
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGM-RADSCAP 175
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ Y ++ CE+G + +L E PN + L+ G+ + E KV
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ + V Y I LCK + E A L M+ G++PN+ TY LI G E
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G+L+ A +L M G P+ + F + LC+ + E A + + KG +
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 361 KSLVTGLASISKVAEANELIGLM 383
SL+ GL K+ A+EL+ M
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKM 378
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 7/333 (2%)
Query: 67 LAPESPLDRM-AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
L+P +PL + + + L++ F + L + R N R + I Y A
Sbjct: 32 LSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPAR-----NLRTYTTLINAYCLAG 86
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
I A Q + GL A + +LG + R+F P + G + TY
Sbjct: 87 DIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP-LRGCLRTAFTY 145
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ +G ++ MR S P+ + ++ G + + E+ +L+
Sbjct: 146 TALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMS 205
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + VYN I C E A + +GM PN+ TY LIHG K G +E
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF+ M G EP+ + C G + A ++ G VP+ T L+
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
L KV EA +G + K+ K ++ +L
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSL 358
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G ++ NAL+ G + E ++F E PN TY ++I C+SG
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVF-EGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ + M + PN + L+ G E + ++L +ME G+ +++ I
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+LCK ++ EEA+ L ++ +G+K N Y LI G K G ++ A +L M + G P
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
D++ + LC+ + A + M KG
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ +Y+ +I C S +L +M K I+ + + +++ +E E
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ M GI + Y + ++S C+ R E+A++++ M+ RG+ PNL TY LI G
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR-ASMAKGWVP 355
+ G + A F M G +P+ + + + + + ++ + + A M
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQES 561
Query: 356 HFSTM--KSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
++ + K L+ GL VAE + L+ +MK+ + + NA +
Sbjct: 562 NYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMI 606
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EPN YN +I +C +G+ + M PN + L+ G K K E
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M + G+ V Y IQ C + A LL M + G+ PN T+ LI
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K +E A+ S+ G + + + LC+ G+ + A ++ + +++G+VP
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ SL+ GL K+++A ++ M ++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE--EVKRIFTEFPKVY-- 176
Y Q + A+ T E+M++ GL N + ++SK E EV T ++
Sbjct: 370 YCQEGDVKKAILTTEQMEERGLEP-----NRITFNTVISKFCETGEVDHAETWVRRMVEK 424
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P ETYN +I + + G + L EM + I+PN +G L+ K+ K D
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA 484
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
VL M G++ +YN+ I++ C L + ++A D M+ GI L TY LI+G
Sbjct: 485 EIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPD 321
G+ G ++ A+ LF M GC PD
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPD 569
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 132/339 (38%), Gaps = 50/339 (14%)
Query: 85 LSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANM-------IDHAMQTF 134
L + HF + ++ TRPD V YG+A +D +
Sbjct: 132 LVDSRHFEKTLAVFADVIDSGTRPD-----------AVAYGKAVQAAVMLKDLDKGFELM 180
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+ M K G+ SV A N +L G + ++ +++F E + + PN+ TYN +I +C+
Sbjct: 181 KSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQ-RNMVPNTVTYNTLIDGYCK 239
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG--- 251
G M+ +++ N + LL G + +D +VL ME G G
Sbjct: 240 VGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFL 299
Query: 252 -------------------------VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
Y I + LC++ R E+A+ +L ++ G+ P+
Sbjct: 300 SFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPS 359
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
+Y L++ + +EG+++ A M G EP+ F C+ GE + A R
Sbjct: 360 KISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVR 419
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ KG P T SL+ G E + M K
Sbjct: 420 RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
+ M+D A + M K G S ++N LL + S+++E+ +F + G P++
Sbjct: 100 SKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVID-SGTRPDAV 158
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
Y K +++ D + ++ M + + P+ + L+L G K + +D K+ M
Sbjct: 159 AYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM 218
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ + YN I CK+ EEA + M + ++ NL TY L++G G +
Sbjct: 219 IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRV 278
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMF 328
+ A+++ M G P + F+F
Sbjct: 279 DDAREVLLEMEGSGFLPGGFLSFVF 303
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 125/305 (40%), Gaps = 3/305 (0%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
+++++I V+ Q E+++ R L N I + + +DHA
Sbjct: 360 KISYNILVNAYCQEGDVKKAILTTEQMEERG-LEPNRITFNTVISKFCETGEVDHAETWV 418
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
M + G+ +V+ N+L+ G ++ E K GI+PN +Y +I C+
Sbjct: 419 RRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKA-GIKPNVISYGSLINCLCK 477
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+LA+M + + PNA + +L+ K +D + M + GI + +
Sbjct: 478 DRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVT 537
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
YN I L + R ++A+ L M +G P++ TY LI G+ K N + +L+ M
Sbjct: 538 YNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMK 597
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G +P F Y C+ T K+ + + VP ++ A V
Sbjct: 598 ILGIKPTVGTFHPLIY-ACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVM 656
Query: 375 EANEL 379
+A L
Sbjct: 657 KAMSL 661
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 129/327 (39%), Gaps = 12/327 (3%)
Query: 74 DRMAFSIAVSKL---SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
+R+ F+ +SK + +H + + E P + I YGQ
Sbjct: 394 NRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSL----INGYGQKGHFVRC 449
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +EMDK G++ +V + +L+ + + + + + G+ PN+E YN +I+
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIG-RGVSPNAEIYNMLIE 508
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C + EM + I + L+ G + + + + M G
Sbjct: 509 ASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNP 568
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V YN I K +++ L D M GIKP + T+ LI+ KEG + K+F
Sbjct: 569 DVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVT-MDKMF 627
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M PD + + Y + G A+ + + + +G T SL+
Sbjct: 628 QEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRD 687
Query: 371 SKVAEANELIGLMKKR--FPKSGDMWN 395
+V+E L+ MK + PK D +N
Sbjct: 688 RRVSEIKHLVDDMKAKGLVPKV-DTYN 713
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ ++ +++M G++ +V + L+ C + + ++F E ++ + P
Sbjct: 580 YAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYAC-RKEGVVTMDKMFQEMLQM-DLVP 637
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ YN++I S+ E G+ S+ +M + + + + L+ + ++ + ++ ++
Sbjct: 638 DQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLV 697
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ G+ V+ YNI I+ LC LK A M+ RG+ N+ LI G +E
Sbjct: 698 DDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREE 757
Query: 301 GNLEGAKKLFASMTNGG 317
G L A+ + + ++ GG
Sbjct: 758 GMLREAQIVSSELSIGG 774
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 2/247 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM + G+ ++ N L+ G + ++ + +F + G P+ TYN +I
Sbjct: 519 AFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG-KGCNPDVITYNSLI 577
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ +S ++ + +M+ I+P F L+ KE + K+ Q M + +
Sbjct: 578 SGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVT-MDKMFQEMLQMDLV 636
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
VYN I S + +A +L M+ +G+ + TY LI + ++ + K L
Sbjct: 637 PDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHL 696
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P + + LC ++ A R + +G + + S L++GL
Sbjct: 697 VDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLRE 756
Query: 370 ISKVAEA 376
+ EA
Sbjct: 757 EGMLREA 763
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
DL ++ + I Y + + AM ++M G+ N+L+L + + E+
Sbjct: 634 DLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEI 693
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
K + + K G+ P +TYN +IK C+ D + Y EM + + N + L++
Sbjct: 694 KHLVDDM-KAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLIS 752
Query: 226 GFYKE 230
G +E
Sbjct: 753 GLREE 757
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 72/179 (40%), Gaps = 2/179 (1%)
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ + +S L+E+ +P +D L L K ++ + M K G N
Sbjct: 70 TKTAFSSLSELHAHVSKPFFSDNLLWLCSVSK--MLDEATDLYSTMRKDGFVPSTRSVNR 127
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+++L + E+ A+ ++ G +P+ Y + +L+ +L SM G
Sbjct: 128 LLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDG 187
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
P + + + LC+ + A K+ + + VP+ T +L+ G + + EA
Sbjct: 188 MGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEA 246
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 2/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
++ E M + G V L+ G +N + R+ E + +G +P+ YN +I
Sbjct: 104 SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFG-QPDVFAYNALI 161
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ +L MR K P+ + +++ K + KVL +
Sbjct: 162 NGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQ 221
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I I++ +EA LLD MLSRG+KP++ TY +I G KEG ++ A ++
Sbjct: 222 PTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 281
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
++ GCEPD + + L G++E K+ ++ P+ T L+T L
Sbjct: 282 IRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341
Query: 370 ISKVAEANELIGLMKKR 386
K+ EA L+ LMK++
Sbjct: 342 DGKIEEAMNLLKLMKEK 358
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 143/301 (47%), Gaps = 12/301 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D A++ ++ + N + +++L+ ++++ PD + S+ G+ +D A
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPD-TVTYNIMIGSLCSRGK---LDLA 208
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ +++ + +V L+ +L +E ++ E G++P+ TYN +I+
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLS-RGLKPDMFTYNTIIR 267
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--EKCGI 248
C+ G + ++ + K P+ + +LL + K+E+ K++ M EKC
Sbjct: 268 GMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD- 326
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y+I I +LC+ + EEA LL M +G+ P+ +Y LI F +EG L+ A +
Sbjct: 327 -PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+M + GC PD + LC+ G+ + AL++ G P+ S+ ++ + L
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 445
Query: 369 S 369
S
Sbjct: 446 S 446
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 157/351 (44%), Gaps = 23/351 (6%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
R+LD +P D + ++I + L + ++L++L L N + V
Sbjct: 175 RVLDRMRSKDFSP----DTVTYNIMIGSLCSRGKLDLALKVLDQL-----LSDNCQPTVI 225
Query: 117 SIVLYGQANM----IDHAMQTFEEMDKYGLRQSVDALNALLLG-C---ILSKNYEEVKRI 168
+ + +A M +D A++ +EM GL+ + N ++ G C ++ + +E ++ +
Sbjct: 226 TYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNL 285
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
++ G EP+ +YN ++++ G ++ +M + PN + +L+
Sbjct: 286 -----ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 340
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
++ K E+ +L++M++ G+ Y+ I + C+ R + A L+ M+S G P++
Sbjct: 341 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 400
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
Y ++ K G + A ++F + GC P+S + L G+ AL +
Sbjct: 401 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 460
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK-RFPKSGDMWNAAL 398
++ G P T S+++ L V +A EL+ M+ F S +N L
Sbjct: 461 VSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 131/295 (44%), Gaps = 16/295 (5%)
Query: 96 QLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALN 150
+LL+E+ +R PD+ ++ ++ G + M+D A + ++ G V + N
Sbjct: 245 KLLDEMLSRGLKPDM------FTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYN 298
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETYNKVIKSFCESGDSSSVYSILAEM 208
LL + +EE +++ T K++ +PN TY+ +I + C G ++L M
Sbjct: 299 ILLRALLNQGKWEEGEKLMT---KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 355
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
+ K + P+A + L+A F +E + + + L+ M G + YN + +LCK ++
Sbjct: 356 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
++A + + G PN +Y + G+ A + M + G +PD +
Sbjct: 416 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSM 475
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC+ G + A ++ + + P T ++ G ++ +A +++ M
Sbjct: 476 ISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSM 530
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 2/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A++ E ++K+G + V A NAL+ G ++ R+ + P++ TYN
Sbjct: 136 VPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYN 193
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C G +L ++ + +P + +L+ E ++ K+L M
Sbjct: 194 IMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSR 253
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + YN I+ +CK + A ++ + +G +P++ +Y L+ +G E
Sbjct: 254 GLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEG 313
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+KL M + C+P+ + + LC+ G+ E A+ + + KG P + L+
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 373
Query: 367 LASISKVAEANELIGLM 383
++ A E + M
Sbjct: 374 FCREGRLDVAIEFLETM 390
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 8/229 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ +SI ++ L + LL+ +K + PD + I + + +D A++
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL----IAAFCREGRLDVAIE 385
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
E M G + N +L + ++ IF + +V G PNS +YN + +
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNTMFSAL 444
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
SGD ++ EM I P+ + +++ +E + ++L M C V
Sbjct: 445 WSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSV 504
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
YNI + CK R E+A +LD M+ G +PN TY LI G G G
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAG 553
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
K+ C SG+ +L M RK P+ L+ GF+ +V++++EK
Sbjct: 90 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKF 149
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN I CK+ R ++A +LD M S+ P+ TY +I G L+ A
Sbjct: 150 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 208
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+ + + C+P + + G + ALK+ +++G P T +++ G
Sbjct: 209 LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRG 268
Query: 367 LASISKVAEANELI 380
+ V A E+I
Sbjct: 269 MCKEGMVDRAFEMI 282
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 36/291 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ++HA++ FE MD +V L+ G S E +F+ + G+EP
Sbjct: 222 YCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA-GLEP 280
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I+ C G + +L M + PN F +L+ K K E+ L
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFL 340
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ K G+ VY I LCK + + A L+ M+S G P+ +Y LI G ++
Sbjct: 341 GSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQ 400
Query: 301 GNL-----------------------------------EGAKKLFASMTNGGCEPDSYCF 325
L EG KK+F M G PD +
Sbjct: 401 KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTY 460
Query: 326 FMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+F C+ G E A + + +G P+ T +L+ G A++ V++A
Sbjct: 461 TVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQA 511
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 1/263 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A M+ HA + F M G ++ ALL G + + E +F + P
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGM-RADSCAP 175
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ Y ++ CE+G + +L E PN + L+ G+ + E KV
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ + V Y I LCK + E A L M+ G++PN+ TY LI G E
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G+L+ A +L M G P+ + F + LC+ + E A + + KG +
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVY 355
Query: 361 KSLVTGLASISKVAEANELIGLM 383
SL+ GL K+ A+EL+ M
Sbjct: 356 TSLIDGLCKTGKIDAADELMQKM 378
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 7/333 (2%)
Query: 67 LAPESPLDRM-AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN 125
L+P +PL + + + L++ F + L + R N R + I Y A
Sbjct: 32 LSPSAPLPPLRCLNTLLMALARHRMFPDMESLASRMPAR-----NLRTYTTLINAYCLAG 86
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
I A Q + GL A + +LG + R+F P + G + TY
Sbjct: 87 DIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP-LRGCLRTAFTY 145
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
++ +G ++ MR S P+ + ++ G + + E+ +L+
Sbjct: 146 TALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMS 205
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + VYN I C E A + +GM PN+ TY LIHG K G +E
Sbjct: 206 NGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A LF+ M G EP+ + C G + A ++ G VP+ T L+
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 366 GLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
L KV EA +G + K+ K ++ +L
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSL 358
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G ++ NAL+ G + E ++F E PN TY ++I C+SG
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVF-EGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ + M + PN + L+ G E + ++L +ME G+ +++ I
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
+LCK ++ EEA+ L ++ +G+K N Y LI G K G ++ A +L M + G P
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
D++ + LC+ + A + M KG
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EPN YN +I +C +G+ + M PN + L+ G K K E
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M + G+ V Y IQ C + A LL M + G+ PN T+ LI
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K +E A+ S+ G + + + LC+ G+ + A ++ + +++G+VP
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ SL+ GL K+++A ++ M ++
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL------------ 224
G+ PN TYN +I+ + G S +S M K +PN + +LL
Sbjct: 487 GVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNS 546
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
+K +D+ +L+ + + + ++Y+ I+ LC++ R EEAK GM + +
Sbjct: 547 VDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLT 606
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+ D Y +I + L A L SMT G P + + LC+GG + TA +V
Sbjct: 607 PSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV 666
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ K K L+ GL VAE + L+ +MK+ + + NA +
Sbjct: 667 FGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMI 720
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P++ +Y+ +I C S +L +M K I+ + + +++ +E E
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ M GI + Y + ++S C+ R E+A++++ M+ RG+ PNL TY LI G
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501
Query: 297 FGKEGNLEGAKKLFASMTNGGCEP--DSYCFFM 327
+ G + A F M G +P DSY +
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/373 (18%), Positives = 127/373 (34%), Gaps = 53/373 (14%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
FR+L + L P + FS+ + L + L L + ++ NE +
Sbjct: 302 FRLLHLMETNGLVP----NDWTFSVLIDALCKREKVEEAQLFLGSL-VKKGVKVNEVVYT 356
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I + ID A + ++M G + ++L+ G K + + + +
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMME- 415
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI+ + TY +I S I +M I P+ + + + + +E + ED
Sbjct: 416 KGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMED 475
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ M G+ + YN I+ L +A + + M+ +G KPN D+Y L+
Sbjct: 476 AESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLR 535
Query: 296 GFGKEGN-----------------------------------------------LEGAKK 308
K+ + LE AK
Sbjct: 536 LVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKH 595
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
F M N P + C+ AL + + G++PH + + +++ L
Sbjct: 596 FFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLC 655
Query: 369 SISKVAEANELIG 381
A E+ G
Sbjct: 656 EGGNFRTAKEVFG 668
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 62/332 (18%), Positives = 125/332 (37%), Gaps = 27/332 (8%)
Query: 14 KTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPL 73
K ++ L ++ G +A+ +T + + SE P +I D + P
Sbjct: 401 KKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE-GPKKIFDKMIATGINP---- 455
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANM--ID 128
D + +++ V + ++ ++ R P+L ++ ++ G AN+ +
Sbjct: 456 DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV------TYNTLIRGYANLGLVS 509
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCI---LSKNYEEVKRI--------FTEFPKVYG 177
A TFE M G + + D+ LL + S N ++ +I E
Sbjct: 510 QAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQ 569
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ ++ Y+ I+ C M+ ++ P+ + ++ + D
Sbjct: 570 LPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDAL 629
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L M K G + Y I I SLC+ AK + +L + + +K LI+G
Sbjct: 630 TLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGL 689
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
++G++ L + M G +P + M T
Sbjct: 690 LQKGSVAEFSSLLSVMKEHGYQPSNTINAMIT 721
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 141/336 (41%), Gaps = 22/336 (6%)
Query: 68 APESPLDRMAFSIAVSKLS-QANHFNAISQLLEELKTRPDLRQN--------ERFHVHS- 117
AP +PL+ A + + K S Q LL EL R + + ++ H+ S
Sbjct: 141 APSTPLNSTA--LLLEKWSHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSE 198
Query: 118 --------IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
I G+ ++ A+ F K G +V A +A++ S E ++F
Sbjct: 199 WSKLASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVF 258
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESG-DSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
K G +PN TYN +I + + G D I EM+++ + P+ F L+A
Sbjct: 259 QAMKKA-GCKPNLITYNTIIDACGKGGVDLKQALDIFDEMQKEGVEPDRITFNSLIAVCS 317
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
+ +ED +V M++ GI + +N I ++CK + E A +++ M + I PN+
Sbjct: 318 RGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVV 377
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY +I G+GK G E A L+ M G PD + + G ++ AL C+
Sbjct: 378 TYSTMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDM 437
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G T +L+ K +A L MK
Sbjct: 438 ERVGLKADVVTYNALIDAYGKQGKYKDAACLFDKMK 473
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 36/273 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+ F+EM K G+ N+L+ C +E+ +R+F E + GIE + T+N
Sbjct: 287 LKQALDIFDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQR-RGIEQDIFTFN 345
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF------------YKEHK-- 232
+I + C+ G SI+ MR K+I PN + ++ G+ Y + K
Sbjct: 346 TLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKES 405
Query: 233 ---------------------YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
++D + ME+ G+ + V YN I + K + ++A
Sbjct: 406 GVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAYGKQGKYKDA 465
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L D M G+ PN+ TY LI + K G + +F G +PD +
Sbjct: 466 ACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYSSLIDS 525
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
C+ G E A+ + + G P+ T SL+
Sbjct: 526 CCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLI 558
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS-EEAKAL 274
N + +++ + + + + KV Q M+K G + YN I + K ++A +
Sbjct: 234 NVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKQALDI 293
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
D M G++P+ T+ LI + G E ++++FA M G E D + F +C+
Sbjct: 294 FDEMQKEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCK 353
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
GG+ E A + K P+ T +++ G + EA L MK+
Sbjct: 354 GGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMKE 404
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 48/258 (18%)
Query: 98 LEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
++E RPD R ++++ +Y + D A+ ++M++ GL+ V NAL+
Sbjct: 402 MKESGVRPD-----RVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNALIDAY 456
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
Y++ +F + K G+ PN TY+ +I S+ ++G V ++ E +R ++P+
Sbjct: 457 GKQGKYKDAACLFDKM-KGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPD 515
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL-- 274
+ L+ K ED +LQ M + GI + YN I + + ++++ +A+
Sbjct: 516 VVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKA 575
Query: 275 ---------------------------------------LDGMLSRGIKPNLDTYKHLIH 295
M G+KPN+ T+ +++
Sbjct: 576 NMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILN 635
Query: 296 GFGKEGNLEGAKKLFASM 313
+ +L+ A L M
Sbjct: 636 ACSRCASLQEASVLLEQM 653
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 8/312 (2%)
Query: 72 PLDRMAFSIAVSKLSQANHFN-AISQLLEELKT--RPDLRQNERFHVHSIVLYGQANMID 128
P D +I ++ N + A+S L + LK +PD V + + G+ I
Sbjct: 88 PPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTL-VRGLCVVGK---IG 143
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ F++M G + +V L+ G + E +F+E GI P+ TYN +
Sbjct: 144 EALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEM-IAKGISPDIFTYNSL 202
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I + C + V ++L EM + I PN +++ KE K + V+ MM + G+
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y + C +EA + D M+ G N+ +Y LI+G+ K ++ A
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M P++ + + LC G + A+ + +A G +P+ T L+ L
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC 382
Query: 369 SISKVAEANELI 380
++AEA L+
Sbjct: 383 KNHRLAEAMALL 394
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 1/242 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A++ F+ M + G +V + N L+ G + ++ +F E + I PN+ TY+
Sbjct: 282 MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI-PNTMTYS 340
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G ++ EM PN + +LL K H+ + +L+ +E
Sbjct: 341 TLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGS 400
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ V VYNI I +C+ E A+ L + RG++P++ T+ +I G K G L+ A
Sbjct: 401 NLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEA 460
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KLF M GC + + T L Q + A+++ +A+G+ ST LV
Sbjct: 461 SKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKM 520
Query: 367 LA 368
L+
Sbjct: 521 LS 522
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A + M + G+ V AL+ G L +E ++F + G N +YN
Sbjct: 247 VTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVR-NGCVCNVVSYN 305
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ + EM R+ + PN + L+ G + +D + M C
Sbjct: 306 TLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVAC 365
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + Y+I + LCK R EA ALL + + P++ Y I G + G+LE A
Sbjct: 366 GQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAA 425
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ LF+++ G +PD + + LC+ G + A K+ R G + + T ++ G
Sbjct: 426 RDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQG 485
Query: 367 LASISKVAEANELIGLMKKR 386
L +K + A +L+ M R
Sbjct: 486 LLQNNKTSRAIQLLEEMLAR 505
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 2/265 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F EM G+ + N+L+ ++ V + E K I PN + N V+
Sbjct: 180 ALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVK-SKIMPNVVSLNIVV 238
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ G + + ++ M + + P+ + L+ G + ++ KV MM + G
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I CK++R ++A L + M + + PN TY LIHG G L+ A L
Sbjct: 299 CNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIAL 358
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M G P+ + + +LC+ A+ + +A P + G+
Sbjct: 359 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCR 418
Query: 370 ISKVAEANELIGLMKKRFPKSGDMW 394
+ A +L + R + D+W
Sbjct: 419 AGDLEAARDLFSNLAPRGLQP-DVW 442
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 106/287 (36%), Gaps = 36/287 (12%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N +D A+ +F M + LL K+Y V + + +GI P+ T
Sbjct: 35 NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDS-FGIPPDVYT 93
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
VI SFC S+LA++ + +P+ F L+ G K + V M
Sbjct: 94 LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH--------- 295
G V Y + LCK ++ EA L M+++GI P++ TY LIH
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213
Query: 296 --------------------------GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
KEG + A + M GG EPD +
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
C E + A+KV + G V + + +L+ G I ++ +A
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKA 320
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 101/227 (44%), Gaps = 2/227 (0%)
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYN--KVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
S ++ + + F ++ + P + K++ S + S+V S+ +M I P+
Sbjct: 31 SLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPD 90
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+++ F ++ + VL + K G + ++ LC + + EA + D
Sbjct: 91 VYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFD 150
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M+ G +PN+ TY L++G K+ L A LF+ M G PD + + + LC
Sbjct: 151 KMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLC 210
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
E++ + + +P+ ++ +V L KV EA++++ +M
Sbjct: 211 EWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMM 257
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P +F LL K Y V + + M+ GI V I I S C L R + A ++
Sbjct: 54 PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L +L G +P+ T+ L+ G G + A +F M G +P+ + LC+
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ AL + +AKG P T SL+ L ++ + L+ M K
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVK 224
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 62/134 (46%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ + YN I C +GD + + + + + ++P+ +++ G K ++
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEAS 461
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+ + M++ G YN Q L + ++ A LL+ ML+RG ++ T L+
Sbjct: 462 KLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521
Query: 298 GKEGNLEGAKKLFA 311
+G + K++
Sbjct: 522 SDDGLDQSVKQILC 535
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 117/240 (48%), Gaps = 1/240 (0%)
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
+G++ N LL + + ++ +++E GI+P+ T+N ++K+ C +
Sbjct: 140 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ +L EM + + P+ T F L+ GF +E E +V M + G ++ N+ I
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CKL R E+A + ++ G +P+ TY ++G + ++ A K+ M G +
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + + + LC+ G+ E A + + +G +P +T +L+ L + +++ EA +L
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHV 115
LD+ ++ SP D F+I ++ L + + +L EE+K PD +
Sbjct: 376 LDLARQVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD-EVTYNTLI 433
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
++ G+ + A+ ++M+ G +S N ++ G EE + +F + +
Sbjct: 434 DNLCSLGK---LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DL 489
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI N+ T+N +I C+ + ++ +M + ++PN + +L + K+ +
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKK 549
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L+ M G V Y I LCK R++ A +L GM +G++P Y ++
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWV 354
+ N+ A LF M G PD+ + + LC+ GG + A + KG++
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 669
Query: 355 PHFSTMKSLVTGLASIS 371
P FS+ + L GL ++
Sbjct: 670 PEFSSFRMLAEGLLNLG 686
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 6/300 (2%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
+++D+ P D ++I V+ L + +L ++ R L F+
Sbjct: 306 LKVMDVMVQEGHDP----DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 361
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I N ++ A+ ++ G+ V N L+ + R+F E K
Sbjct: 362 -LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KN 419
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G P+ TYN +I + C G +L +M + + ++ G K+ + E+
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+V M+ GI+ +N I LCK K+ ++A L++ M+S G++PN TY ++
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILT 539
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ K+G+++ A + +MT G E D + LC+ G + ALKV R KG P
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L +A+ +LEE+ +R + +E + + + I+ A++
Sbjct: 180 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M + G + +N L+ G C L + + + I E G EP+ TYN +
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD--GFEPDQITYNTFVNGL 296
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++ ++ M ++ P+ + +++ K + E+ +L M G +
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I +LC R EEA L + +G+ P++ T+ LI+ K G+ A +LF
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M N GC PD + LC G+ AL + + + G T +++ GL +
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476
Query: 373 VAEANELIGLM 383
+ EA E+ M
Sbjct: 477 IEEAEEVFDQM 487
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 129/314 (41%), Gaps = 8/314 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D++ ++ V+ L Q +H ++++ + PD+ V+ + GQ ++ A
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF-TYNIVVNCLCKNGQ---LEEA 340
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+M G + N L+ EE + + V G+ P+ T+N +I
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-TVKGVSPDVYTFNILIN 399
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C+ GD + EM+ P+ + L+ K +L+ ME G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN I LCK R EEA+ + D M +GI N T+ LI G K+ ++ A L
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLI 519
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G +P++ + C+ G+ + A + A G+ T +L+ GL
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 371 SKVAEANELIGLMK 384
+ A +++ M+
Sbjct: 580 GRTQVALKVLRGMR 593
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 4/282 (1%)
Query: 105 PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE 164
PDL+ R +L + + ID A + + M + G+R +V N +L +E
Sbjct: 152 PDLKNCNRV---LRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQE 208
Query: 165 VKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLL 224
++ + K+ G PN TYN ++ SG+ ++ EM R + +A + L+
Sbjct: 209 ALQLLLQMQKM-GCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLI 267
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
G+ ++ + ++ ++ + M G + YN + LCK R +A+ LLD M+++ +
Sbjct: 268 RGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLM 327
Query: 285 PNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
P+L +Y LI+G+ + GN+ A LFA + G P + LC+ G+ + A+++
Sbjct: 328 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRL 387
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G P T LV G + + A EL M R
Sbjct: 388 KDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR 429
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 116/269 (43%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
+Y + +M++ + F +M G+ + N +L + +V R GI
Sbjct: 128 IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIR 187
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P TYN ++ SFC+ G +L +M++ PN + +L+ G + E ++
Sbjct: 188 PTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKEL 247
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+Q M + G+ Y+ I+ C+ + +EA L + MLSRG P L TY +++G K
Sbjct: 248 IQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCK 307
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A+KL M N PD + Y + G A + +G VP T
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRFP 388
+L+ GL + + A L M K P
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGP 396
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 120/292 (41%), Gaps = 36/292 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A+Q +M K G + N L+ G S E+ K + E ++ G+E ++ TY+
Sbjct: 206 VQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRL-GLEVSAYTYD 264
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I+ +CE G + EM + P + ++ G K + D K+L +M
Sbjct: 265 PLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNK 324
Query: 247 -----------------------------------GIASGVNVYNIRIQSLCKLKRSEEA 271
G+ V YN I LC++ + A
Sbjct: 325 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVA 384
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L D M+ G P++ T+ L+ GF K GNL AK+LF M N G +PD + +
Sbjct: 385 MRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 444
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ G+ A + +A+G+ P T + GL + + EA+EL+ M
Sbjct: 445 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM 496
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 121/276 (43%), Gaps = 9/276 (3%)
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++ ++YG + I A F E+ GL SV N L+ G + + R+ E
Sbjct: 333 YNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI 392
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K +G +P+ T+ +++ FC+ G+ + EM + ++P+ + + G E K
Sbjct: 393 K-HGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG---ELKL 448
Query: 234 EDVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
D K M E+ G + YN+ I L KL +EA L+ ML G+ P+ TY
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+IH G+L A+ +F M + G P + + + G + A+
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
KG P+ T +L+ GL + K+ +A + M+ +
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK 604
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 102/255 (40%), Gaps = 3/255 (1%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
++ ++YG + + A + + M L + + N L+ G N E +F E
Sbjct: 298 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL- 356
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ G+ P+ TYN +I C GD + EM + P+ F +L+ GF K
Sbjct: 357 RFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNL 416
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
++ M G+ Y RI KL +A + + ML+RG P+L TY
Sbjct: 417 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 476
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G K GNL+ A +L M G PD + + G A V ++KG
Sbjct: 477 IDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGI 536
Query: 354 VPHFSTMKSLVTGLA 368
P T L+ A
Sbjct: 537 FPSVVTYTVLIHSYA 551
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 139/341 (40%), Gaps = 20/341 (5%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
S+ ++LD+ +L P D ++++ + ++ + L EL+ R
Sbjct: 312 SDARKLLDVMVNKNLMP----DLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG------- 360
Query: 113 FHVHSIVLY-----GQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
V S+V Y G M +D AM+ +EM K+G V L+ G N
Sbjct: 361 -LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMA 419
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
K +F E G++P+ Y I + GD S + + EM + P+ + + +
Sbjct: 420 KELFDEMLN-RGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G +K ++ ++++ M G+ Y I + +A+A+ MLS+GI P
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
++ TY LIH + G L+ A F M G P+ + LC+ + + A K
Sbjct: 539 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFF 598
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
AKG P+ T L+ ++ EA L M R
Sbjct: 599 TEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 639
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 52/124 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P+ TY +I S+ G EM K + PN + L+ G K K +
Sbjct: 535 GIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQA 594
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K M+ GI+ Y I I C L +EA L ML R I+P+ T+ L+
Sbjct: 595 YKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKH 654
Query: 297 FGKE 300
K+
Sbjct: 655 LNKD 658
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+HS + G+ + A+ F EM + G+ +V NAL+ G + ++ + FTE +
Sbjct: 547 IHSYAVRGRLKL---AILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEM-Q 602
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
GI PN TY +I C G + +M + I+P++ LL K++K
Sbjct: 603 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK 660
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 55/298 (18%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q N I + + M K G +V ALN L + EEV RI +PN
Sbjct: 209 QPNQITYG-TIVDGMCKMG--DTVSALNLL-------RKMEEVSRI----------KPNV 248
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y+ +I + G + ++ +EM+ K I PN + ++ GF ++ + ++L+
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + ++ V +++ I +L K + EA+ L + ML RGI PN TY +I GF K+
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368
Query: 303 LEGAKKLFASMTNGGCEP---------DSYC--------------------------FFM 327
L+ A+++F M GC P D YC +
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ CQ G AL + + ++ G P+ T +L+ GL + K+ +A E+ +M+K
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQK 486
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 14/320 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + FS+ ++ L + F +L E+ R + N + I + + N +D A
Sbjct: 315 SP-DVVTFSVLINALVKEGKFFEAEELYNEMLPR-GIIPNTITYNSMIDGFSKQNRLDAA 372
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F M G V + L+ G +K ++ ++ E + G+ N+ TY +I
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSR-RGLVANTITYTTLIH 431
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---- 246
FC+ G+ ++ +L EM + PN LL G K +D ++ ++M+K
Sbjct: 432 GFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDL 491
Query: 247 -------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ V YNI I L + EA+ L + M RG+ P+ TY +I G K
Sbjct: 492 DASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCK 551
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ L+ A ++F SM + G PD F C+ G L+V +G V + T
Sbjct: 552 QSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAIT 611
Query: 360 MKSLVTGLASISKVAEANEL 379
++L+ G + + A ++
Sbjct: 612 YRTLIHGFCQVGNINGALDI 631
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 135/319 (42%), Gaps = 23/319 (7%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL--YGQANMID 128
+ + ++ + S+ N +A ++ + T+ PD+ SI++ Y A +D
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDV------ITFSILIDGYCGAKRVD 405
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
M+ EM + GL + L+ G N + E G+ PN T N +
Sbjct: 406 DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMIS-SGVCPNVVTCNTL 464
Query: 189 IKSFCESGDSSSVYSILAEMRR-----------KSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ C +G + M++ + P+ + +L+ G E K+ +
Sbjct: 465 LDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAE 524
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ + M G+ YN I LCK R +EA + D M S+G P++ T+ LI+G+
Sbjct: 525 ELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGY 584
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G + ++F M G ++ + + CQ G AL + + ++ G P
Sbjct: 585 CKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDT 644
Query: 358 STMKSLVTGLASISKVAEA 376
T+++++TGL S ++ A
Sbjct: 645 ITIRNMLTGLWSKEELKRA 663
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 14/270 (5%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNK 187
A + EM + + V + L+ + + E + ++ E P+ GI PN+ TYN
Sbjct: 301 EAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPR--GIIPNTITYNS 358
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I F + + + M K P+ F +L+ G+ + +D K+L M + G
Sbjct: 359 MIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRG 418
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + Y I C+L A LL M+S G+ PN+ T L+ G G L+ A
Sbjct: 419 LVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDAL 478
Query: 308 KLF-----------ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++F AS EPD + + L G++ A ++ +G VP
Sbjct: 479 EMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPD 538
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T S++ GL S++ EA ++ M +
Sbjct: 539 TITYNSVIDGLCKQSRLDEATQMFDSMGSK 568
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 84/245 (34%), Gaps = 40/245 (16%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I N ++ +IK FC S ++ + P+ F LL G E + +
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG--------------- 282
+ K + + + N LC+ R EA ALLD M+ G
Sbjct: 167 HFFHQICKPNVIAFTTLMN----GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222
Query: 283 ---------------------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
IKPN+ Y +I G K+G A+ LF+ M G P+
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + C G + A ++ R + P T L+ L K EA EL
Sbjct: 283 LFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYN 342
Query: 382 LMKKR 386
M R
Sbjct: 343 EMLPR 347
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 71/182 (39%), Gaps = 4/182 (2%)
Query: 204 ILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
+ M R P DF LL + + + V + + ME I + + I I+ C
Sbjct: 63 LFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFC 122
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+ A + + G P+L T+ L+HG E + A F + C+P+
Sbjct: 123 SCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVI 178
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
F LC+ G A+ + + G P+ T ++V G+ + A L+ M
Sbjct: 179 AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 238
Query: 384 KK 385
++
Sbjct: 239 EE 240
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 143 RQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
R SVD + N +L G L K + + E + GI PN TYN ++K F +G
Sbjct: 184 RFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVE-RGINPNLTTYNTMLKGFFRAGQIRH 242
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ EM+++ + + ++ GF + + V M + G+ V YN IQ
Sbjct: 243 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 302
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK E A + + M+ RG +PN+ TY LI G G ++L M N GCEP
Sbjct: 303 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 362
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ + M + + E E AL + + +P+ T L++G+
Sbjct: 363 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 409
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 12/325 (3%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
GA+L P P D A IA LS N + Q L KT P ++ + VL
Sbjct: 9 GANLKP-PPADSAA--IAKLILSSPNTTHQDDQFLLSTKTTPWTP-----NLVNSVLKRL 60
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPN 181
N A+Q F +D + R+ V ++ L ++ +++ ++ I P+
Sbjct: 61 WNHGPKALQFFHFLDNHH-REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 119
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+T+ V + + +G + M + F +L K + E ++ +
Sbjct: 120 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 179
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+ + + YN+ + C +KR+ + +L M+ RGI PNL TY ++ GF + G
Sbjct: 180 AL-RGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAG 238
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A + F M CE D + + GE + A V + +G +P +T
Sbjct: 239 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 298
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
+++ L V A + M +R
Sbjct: 299 AMIQVLCKKDNVENAVVMFEEMVRR 323
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G A I A F+EM + G+ SV NA++ N E +F E + G EP
Sbjct: 269 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEP 327
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +I+ +G+ S ++ M + PN + +++ +Y E +V K L
Sbjct: 328 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR-YYSE--CSEVEKAL 384
Query: 241 QMMEKCGIAS---GVNVYNIRIQSLCKLKRSEE 270
+ EK G ++ YNI I + KRSE+
Sbjct: 385 GLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 417
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCI----LSKNYEEVKRIFTEFPKVYGIEPNS 182
+++A+ FEEM + G +V N L+ G S+ E ++R+ E G EPN
Sbjct: 310 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-----GCEPNF 364
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
+TYN +I+ + E + + +M PN + +L++G + + ED+
Sbjct: 365 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDM 418
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 13/271 (4%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALL------LGCILSKNYEEVKRIFTEFPKVY 176
+ N +D FE + K+G R ++ ++ +GC + +++R K+Y
Sbjct: 183 EDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSV-----DIRRASEILGKIY 237
Query: 177 --GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G PN TY IK C+ G + ++ + RK+ N F ++ G + +
Sbjct: 238 MSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILD 297
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ +V + M+ GI V Y+I I C+ R ++A + M + GI PN+ +Y LI
Sbjct: 298 EASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILI 357
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
GF KEG ++ A ++F M N G PD Y + + C+ G+ ++A+K + +
Sbjct: 358 DGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFS 417
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P SL+ G + A A + +M+K
Sbjct: 418 PSAFNYCSLIKGYYKSKQFANALKEFRIMQK 448
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 145/354 (40%), Gaps = 47/354 (13%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANM 126
PL+ F+ + L Q + S++ +E+K PD+ + +SI++ G +
Sbjct: 277 PLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDV------YSYSILIDGFCRKGR 330
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + F+EM G+ ++ + + L+ G ++ +F E K GI P+ +Y+
Sbjct: 331 VDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM-KNSGILPDVYSYS 389
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC GD S EM + P+A ++ L+ G+YK ++ + K ++M+K
Sbjct: 390 ILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKL 449
Query: 247 GI-------------------------------ASGVNV----YNIRIQSLCKLKRSEEA 271
G+ +GV+ YN I +C+ E+A
Sbjct: 450 GMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKA 509
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
LL ML R + P++ Y LI F K N E A LF MT G + + +
Sbjct: 510 LQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINL 569
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ + A ++ + P SLV G + ++ A L M +
Sbjct: 570 FISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSR 623
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 99/241 (41%), Gaps = 5/241 (2%)
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
NA++ G +E +F E K GI P+ +Y+ +I FC G + E
Sbjct: 282 CFNAVIYGLCQGGILDEASEVFKEM-KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKE 340
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
MR I PN + +L+ GF KE + + +V + M+ GI V Y+I I C+
Sbjct: 341 MRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGD 400
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
+ A + M S P+ Y LI G+ K A K F M G PD+
Sbjct: 401 MDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNH 460
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFS--TMKSLVTGLASISKVAEANELIGLMKK 385
C+ ++ AL + G HF+ + + + S +A +L+ +M K
Sbjct: 461 ILSIYCRKPDFNKALALSEKFQENG--VHFNPYSYNEFIHRICRGSVPEKALQLLPVMLK 518
Query: 386 R 386
R
Sbjct: 519 R 519
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 129/306 (42%), Gaps = 11/306 (3%)
Query: 67 LAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERF--HVHSIVLYG-- 122
++ E+P + + + + L + F +L++ L R+N+ H + V+YG
Sbjct: 238 MSGETP-NVVTYGTYIKGLCKVGLFGVAWRLIQNL-----CRKNQPLNNHCFNAVIYGLC 291
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q ++D A + F+EM G+ V + + L+ G ++ +F E + GI PN
Sbjct: 292 QGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM-RNSGILPNI 350
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+Y+ +I FC+ G + EM+ I P+ + +L+ GF ++ + K +
Sbjct: 351 YSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEE 410
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + Y I+ K K+ A M G+ P+ H++ + ++ +
Sbjct: 411 MTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPD 470
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A L G + Y + F + +C+G E AL++ + + +P +
Sbjct: 471 FNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYST 530
Query: 363 LVTGLA 368
L++ A
Sbjct: 531 LISCFA 536
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 124/349 (35%), Gaps = 38/349 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++SI + + ++ + EE+ T + + + I Y ++ +A++
Sbjct: 384 DVYSYSILIDGFCRKGDMDSAIKFWEEM-TSNNFSPSAFNYCSLIKGYYKSKQFANALKE 442
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M K G+ A N +L ++ + + +F + G+ N +YN+ I C
Sbjct: 443 FRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQE-NGVHFNPYSYNEFIHRIC 501
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+L M ++++ P+ ++ L++ F K E + M K GI V
Sbjct: 502 RGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVK 561
Query: 254 VYNIRIQ-----------------------------------SLCKLKRSEEAKALLDGM 278
Y I I C A+AL D M
Sbjct: 562 TYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEM 621
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
G PN+ TY I+ + K A KL+ M G PD + M C GE
Sbjct: 622 SREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEM 681
Query: 339 ETALKVCRASMAKG-WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A + +G P+ L+ ++K +A +L M+ +
Sbjct: 682 NRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAK 730
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 2/191 (1%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A+ F +M K G+ +V L+ I + R+F K + P+ Y
Sbjct: 542 EKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGM-KESRVYPDQIAYTS 600
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC +G+ + ++ EM R+ PN + + + K +K K+ + M++ G
Sbjct: 601 LVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERG 660
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIHGFGKEGNLEGA 306
+ +Y + I + C A+AL D M G PN+ Y LI+ + K + A
Sbjct: 661 VYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQA 720
Query: 307 KKLFASMTNGG 317
+KL+ M G
Sbjct: 721 EKLYEEMRAKG 731
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/230 (18%), Positives = 88/230 (38%), Gaps = 44/230 (19%)
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
E+ D+ + S+L ++ + ++ F +L+ F E V + GI +
Sbjct: 118 ENRDAGELVSLLLDVEKSNVV-----FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIM 172
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH----GFGKEGNLEGAKKL 309
N ++ L + R + + L + ++ G +PN+ TY +++ G G ++ A ++
Sbjct: 173 SCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEI 232
Query: 310 FASMTNGGCEP-----------------------------------DSYCFFMFTYFLCQ 334
+ G P +++CF Y LCQ
Sbjct: 233 LGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQ 292
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
GG + A +V + G +P + L+ G +V +A+E+ M+
Sbjct: 293 GGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 6/310 (1%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P+D + ++ V+ +A +A +L+ +K + N + IV Y + ++ A
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMK-EAGVDPNVATYTPFIVYYCRTKGVEEAF 259
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+E M + G+ V L+AL+ G + E +F E KV G PN TY +I S
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKV-GAVPNHVTYCTLIDS 318
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
++G + S+L EM + + + + L+ K+ K ++V L+ ++
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLN 378
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
Y + I +LCK +EA+ +L M + I PN+ T+ +I+GF K G L+ A +
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Query: 312 SMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G P+ +Y + +F QG + AL+V + +G + + SLV GL
Sbjct: 439 MMKERGINPNVVTYGTLIDGFFKFQG--QDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQ 496
Query: 370 ISKVAEANEL 379
K+ EA L
Sbjct: 497 NGKIEEAMAL 506
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 2/230 (0%)
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
CIL K ++E K I TE + G++P+ TYN +I S C G+++ +L EM+ SI+P
Sbjct: 565 CILGK-FKEAKSILTEMRNM-GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKP 622
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N + L+AG + E +L M G + + +Q+ + +R + +
Sbjct: 623 NLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH 682
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
+ M++ G+ ++ Y L+ G A + M G PD+ F C+
Sbjct: 683 EWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKS 742
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ A + + P+ +T +L+ GL S+ ++ EA ++ M+K
Sbjct: 743 SHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEK 792
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 107/261 (40%), Gaps = 7/261 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q+ +D + E M GL + N LL + + E GI P++
Sbjct: 671 QSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLG-SGIAPDT 729
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
T+N +I C+S + ++ A+M ++I PN F LL G + + G VL
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIE 789
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
MEK G+ Y+I + K EA L M+ +G P + TY LI F K G
Sbjct: 790 MEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849
Query: 303 LEGAKKLFASMTNGGCEPDS--YCFFMFTYFLCQGGEYETALKVCRASMA-KGWVPHFST 359
+ AK+LF M G P S Y + + + G T +K C M KG+ P T
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNG---TEVKKCLKDMKEKGFSPSKGT 906
Query: 360 MKSLVTGLASISKVAEANELI 380
+ + + +A L+
Sbjct: 907 LSFICRAFSKPGMTWQAQRLL 927
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 2/252 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
HA EM K G+ +N LL G + + + ++ ++ +N +
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIG--WNTL 175
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C GD+ + S+ M + + + + L+AGF + + + VL MM++ G+
Sbjct: 176 IAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y I C+ K EEA L +GM+ G+ ++ T L+ G ++G A
Sbjct: 236 DPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYA 295
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M G P+ + L + G + L + +++G V T +L+ L
Sbjct: 296 LFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLG 355
Query: 369 SISKVAEANELI 380
K E + +
Sbjct: 356 KQGKTDEVKDTL 367
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I + C++ + +L EM KSI PN F ++ GF K + +
Sbjct: 378 NGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYK 437
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+MM++ GI V Y I K + + A + ML G++ N L++G +
Sbjct: 438 RMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQN 497
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G +E A LF + G D + L + G+ TA K + M + +P
Sbjct: 498 GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557
Query: 361 KSLVTGLASISKVAEANELIGLMK 384
+ L + K EA ++ M+
Sbjct: 558 NVFINCLCILGKFKEAKSILTEMR 581
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 107/285 (37%), Gaps = 16/285 (5%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A EM G S +L C S+ + + I E+ G+ + YN
Sbjct: 640 VEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIH-EWMMNAGLHADITVYN 698
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++ C G + +L EM I P+ F L+ G K ++ M
Sbjct: 699 TLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 758
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I+ + +N + L + R EA +L M G++PN TY L+ G GK+ N A
Sbjct: 759 NISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEA 818
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L+ M G P + + G A ++ + +G P T LV+G
Sbjct: 819 MRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Query: 367 LASISKVAEANELIGLMKKR---------------FPKSGDMWNA 396
+ I E + + MK++ F K G W A
Sbjct: 879 WSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQA 923
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG--DSSSVYSILAEMRRKSIRPN 216
+ N +E +++ E + I PN T++ VI F + G D ++ Y + M+ + I PN
Sbjct: 392 AHNVDEAEQVLLEMEE-KSISPNVVTFSSVINGFVKRGLLDKATEYKRM--MKERGINPN 448
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS----EEAK 272
+G L+ GF+K + +V M + GV V + SL R EEA
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDM----LCEGVEVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
AL G+ + Y LI G K G++ A K + + PD+ + +F L
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
C G+++ A + G P ST +++ + A+A +L+ MK
Sbjct: 565 CILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 5/246 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALN--ALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Q I+ AM F++ GL S+D +N L+ G + + + E + P
Sbjct: 496 QNGKIEEAMALFKDASGSGL--SLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD-RNMLP 552
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ YN I C G SIL EMR ++P+ + + ++ ++ + K+L
Sbjct: 553 DAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL 612
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ I + YN + L E+AK LL+ M+S G P+ T++ ++ +
Sbjct: 613 HEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQS 672
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L+ + M N G D + LC G A V + G P T
Sbjct: 673 RRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITF 732
Query: 361 KSLVTG 366
+L+ G
Sbjct: 733 NALILG 738
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 84/210 (40%), Gaps = 1/210 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ + T N ++ C +G + + LA+ + + L+AG+ +
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAA-AALADRGGGIHALDVIGWNTLIAGYCRVGDTPAA 188
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
V M G+ V YN + C+ + + A+ +LD M G+ PN+ TY I
Sbjct: 189 LSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVY 248
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ + +E A L+ M G D LC+ G + A + R G VP+
Sbjct: 249 YCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPN 308
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ LA + E L+G M R
Sbjct: 309 HVTYCTLIDSLAKAGRGKELLSLLGEMVSR 338
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 94/245 (38%), Gaps = 35/245 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF---------------- 220
G+ + YN ++ FC +G + +L M+ + PN +
Sbjct: 199 GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258
Query: 221 ----------GLLL---------AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
G+LL AG ++ ++ + + + M+K G Y I S
Sbjct: 259 FDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDS 318
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
L K R +E +LL M+SRG+ +L TY L+ GK+G + K + +
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLN 378
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + LC+ + A +V K P+ T S++ G + +A E
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438
Query: 382 LMKKR 386
+MK+R
Sbjct: 439 MMKER 443
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 103/264 (39%), Gaps = 7/264 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI---LSKNYEEVKRIFTEFPKVYGIE 179
+A+ +D A Q EM++ + +V ++++ G + L E KR+ E GI
Sbjct: 391 KAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE----RGIN 446
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN TY +I F + + + +M + + N L+ G + K E+ +
Sbjct: 447 PNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMAL 506
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ G++ Y I L K A ++ R + P+ Y I+
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCI 566
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + AK + M N G +PD + C+ GE ALK+ P+ T
Sbjct: 567 LGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626
Query: 360 MKSLVTGLASISKVAEANELIGLM 383
+LV GL V +A L+ M
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEM 650
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 1/196 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I+ + +++ +D+A T+ +M + ++ N LL G E + E K G
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEK-SG 794
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+EPN+ TY+ ++ + + + EM K P + + L++ F K
Sbjct: 795 LEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ + M+K G+ Y+I + +++ E K L M +G P+ T + F
Sbjct: 855 ELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAF 914
Query: 298 GKEGNLEGAKKLFASM 313
K G A++L ++
Sbjct: 915 SKPGMTWQAQRLLKNL 930
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 3/267 (1%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
LY + + A+ +EM+ G++ + + L+ G I ++ IF E + G++
Sbjct: 452 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRS-GLQ 510
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ YN +I++FC+ G+ IL +M+++ ++P+ F ++ G+ +
Sbjct: 511 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 570
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L +M + G V YN I L + + + A ++LD M GI PN TY ++ G+
Sbjct: 571 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 630
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G++ A + F + G + D Y + C+ G ++AL V R M+ +P +
Sbjct: 631 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR-EMSFQKIPRNTF 689
Query: 360 MKS-LVTGLASISKVAEANELIGLMKK 385
+ + L+ G A V EA +L+ MK+
Sbjct: 690 IYNILIDGWARRGDVWEAEDLMKQMKE 716
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 139/331 (41%), Gaps = 6/331 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N F I + + L P DR +++ + + + + +LE+++ + ++ + R
Sbjct: 495 ANAFAIFEEMLRSGLQP----DRAIYNLLIEAFCKMGNMDRAICILEKMQ-KERMQPSNR 549
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I Y A + A+ T + M + G +V NAL+ G + + + +
Sbjct: 550 AFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM 609
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ GI PN TY +++ + SGD + +++ ++ + + LL K +
Sbjct: 610 -SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 668
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ V + M I +YNI I + EA+ L+ M G+ PN+ TY
Sbjct: 669 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTS 728
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
I+ K G+++ A+K+ M + G +P+ + + + ALK G
Sbjct: 729 YINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 788
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P ++ LVT L S + V E + G++
Sbjct: 789 LKPDEASYHCLVTSLLSRATVMEGSTYTGII 819
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q+ ++ A + EM++ G+ +D ++++ G + +N + +F K G +P+
Sbjct: 385 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL-KECGFKPSI 443
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+Y ++ + + G + SI EM I+ N + +L+ GF H + + + +
Sbjct: 444 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 503
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M + G+ +YN+ I++ CK+ + A +L+ M ++P+ ++ +I G+ G+
Sbjct: 504 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 563
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A M GC P + + L + + + A+ V G P+ T
Sbjct: 564 MKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTI 623
Query: 363 LVTGLASISKVAEANELIGLMKK 385
++ G A+ + +A E +K+
Sbjct: 624 IMRGYAASGDIGKAFEYFTKIKE 646
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 8/298 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S+ ++ + F + EE+ R L+ + + I + + +D A+ E+
Sbjct: 480 TYSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 538
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K ++ S A ++ G ++ + + + + G P TYN +I
Sbjct: 539 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL-DLMRRSGCVPTVMTYNALIHGLVRKH 597
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---GIASGVN 253
S+L +M I PN + +++ G+ D+GK + K G+ V
Sbjct: 598 KVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG---DIGKAFEYFTKIKESGLKLDVY 654
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y +++ CK R + A A+ M + I N Y LI G+ + G++ A+ L M
Sbjct: 655 IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQM 714
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G P+ + + + C+ G+ + A KV + G P+ T +L+ G A +S
Sbjct: 715 KEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVS 772
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 110/307 (35%), Gaps = 42/307 (13%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV Y + HA TFE M G+ + +L+ ++++ E K G
Sbjct: 304 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM-KSEG 362
Query: 178 IEPNSETYNKVIKSFC------ESGDSSSVYSILAEMRRKSI------------------ 213
+E TY+ +I F +SG+ ++ EM I
Sbjct: 363 LELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQ 422
Query: 214 -----------------RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+P+ +G LL + K K + + ME CGI Y+
Sbjct: 423 NENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYS 482
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ I L A A+ + ML G++P+ Y LI F K GN++ A + M
Sbjct: 483 MLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKE 542
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+P + F G+ ++AL G VP T +L+ GL KV A
Sbjct: 543 RMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRA 602
Query: 377 NELIGLM 383
++ M
Sbjct: 603 VSVLDKM 609
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 41/253 (16%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ GIEPN+ + ++ ++ + D S + EM+ + + + +L++GF K +
Sbjct: 324 RARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDS 383
Query: 234 EDVG------KVLQMMEKCGIASGVNVYN--------IRIQSLC---------------- 263
G ++++ ME+ GI + ++VY+ I+ ++ C
Sbjct: 384 HQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSI 443
Query: 264 -----------KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
K+ + +A ++ M S GIK N TY LI+GF + A +F
Sbjct: 444 ISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEE 503
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M G +PD + + C+ G + A+ + + P + ++ G A
Sbjct: 504 MLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGD 563
Query: 373 VAEANELIGLMKK 385
+ A + + LM++
Sbjct: 564 MKSALDTLDLMRR 576
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 6/204 (2%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
EP+ + +I + + GD + MR + I PNA F L+ +
Sbjct: 294 EPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 353
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRS------EEAKALLDGMLSRGIKPNLDTYKH 292
++ M+ G+ + Y+I I K+ S E A+ L+ M GI +D Y
Sbjct: 354 CVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHS 413
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
++HG+ N +F + G +P + + G+ AL + + + G
Sbjct: 414 MMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG 473
Query: 353 WVPHFSTMKSLVTGLASISKVAEA 376
+ T L+ G + A A
Sbjct: 474 IKHNNKTYSMLINGFIHLHDFANA 497
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F EM GL N LL+ + N+ E K IF++ G+ P+ +++ +
Sbjct: 273 RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLH-RGVSPDLISFSSL 331
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +G +M+ + P+ + +L+ G+ + + ++ M + G
Sbjct: 332 IGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGC 391
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A V YN + LCK K +A AL D M+ RG+ P+ T+ LIHG KEGN+ A
Sbjct: 392 ALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALS 451
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF MT +PD + + C+ E E A ++ +++ P+ + LV G
Sbjct: 452 LFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYC 511
Query: 369 SISKVAEANELIGLMKKR 386
++ V+EA L M ++
Sbjct: 512 NLGFVSEAFRLWDEMIRK 529
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 7/318 (2%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMID 128
SP D ++FS + S+ H + ++KT + N +++I++ Y + M+
Sbjct: 322 SP-DLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNV---IYTILINGYCRNGMMS 377
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ ++M + G V A N +L G K + +F E + G+ P+ T+ +
Sbjct: 378 EALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE-RGVVPDFCTFTTL 436
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I C+ G+ S+ M +K+I+P+ + +L+ GF K + E ++ M I
Sbjct: 437 IHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKI 496
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
Y I + C L EA L D M+ +GIKP L T +I G+ + G+L A +
Sbjct: 497 FPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADE 556
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M + G PDS + +G + A + KG P T ++ G
Sbjct: 557 FLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFC 616
Query: 369 SISKVAEANELIGLMKKR 386
++ EA ++ M +R
Sbjct: 617 RQGRMQEAELILRKMIER 634
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 152/357 (42%), Gaps = 15/357 (4%)
Query: 32 EAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHF 91
+A L ++ +R+ ++R++ + S++ +D + F + + QA
Sbjct: 81 DAQTLILRMIRRSGVSRVEIVESLI---------SMSSTCGVDNLVFDLLIRSYVQARKL 131
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDAL 149
N + + L+ + L + + +L G M +D A + + E+ + G+ +V L
Sbjct: 132 NEGTDTFKILRRKGFLVS---INACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTL 188
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N ++ ++VK + + GI + TYN +I ++C G + ++ M
Sbjct: 189 NIMVNALCKDHKIDDVKPFLIDMEQ-KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMS 247
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
K ++P + ++ G K+ +Y V M G++ YN + C+
Sbjct: 248 GKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFL 307
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EAK + ML RG+ P+L ++ LI + G+L+ A F M G PD+ + +
Sbjct: 308 EAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILI 367
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C+ G AL++ + +G +++ GL +A+AN L M +R
Sbjct: 368 NGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVER 424
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E R++ E + GI+P T N VIK +C SGD S L +M + + P++ + L
Sbjct: 518 EAFRLWDEMIR-KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTL 576
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
+ GF K + ++ ME G+ V YN+ + C+ R +EA+ +L M+ RGI
Sbjct: 577 INGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGI 636
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
P+ TY LI+G+ + NL+ A + M G PD
Sbjct: 637 DPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 92/249 (36%), Gaps = 37/249 (14%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++P TYN VI C+ G + EM + P+ T + LL + + + +
Sbjct: 250 GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEA 309
Query: 237 GKVLQMMEKCGIAS---------GVN--------------------------VYNIRIQS 261
+ M G++ GV+ +Y I I
Sbjct: 310 KDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILING 369
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
C+ EA + D ML +G ++ Y +++G K+ L A LF M G PD
Sbjct: 370 YCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPD 429
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
F + C+ G AL + K P T L+ G +++ +ANEL
Sbjct: 430 FCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWN 489
Query: 382 LM--KKRFP 388
M +K FP
Sbjct: 490 EMISRKIFP 498
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 122/256 (47%), Gaps = 7/256 (2%)
Query: 113 FHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI-- 168
F +++++G + + A F+E+ K GLR +V + N L+ GC + EE R+
Sbjct: 142 FFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKG 201
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
E +V P+ T++ +I C+ G + EM K + PN F +L+ G
Sbjct: 202 VMESERVC---PDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQC 258
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K K + K QMM G+ + YN I LCK+ +EA+ L++ M + G++P+
Sbjct: 259 KGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRI 318
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
T+ LI G K G++E A ++ M G E D F + LC+ G A ++ R
Sbjct: 319 TFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDM 378
Query: 349 MAKGWVPHFSTMKSLV 364
++ G+ P T +V
Sbjct: 379 LSAGFKPDDPTYTMVV 394
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 4/215 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN +N ++ FC+ G S + E+ ++ +RP F L++G K E+
Sbjct: 137 GYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEG 196
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ +ME + V ++ I LCK R +E L D M +G+ PN T+ LI G
Sbjct: 197 FRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDG 256
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G ++ A K F M G PD + LC+ G+ + A ++ A G P
Sbjct: 257 QCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPD 316
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
T +L+ G + A E+ K+R + G
Sbjct: 317 RITFTTLIDGCCKYGDMESALEI----KRRMVEEG 347
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN +I C+ GD ++ EM +RP+ F L+ G K E
Sbjct: 277 GVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESA 336
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ + M + GI + + I LC+ R +A+ +L MLS G KP+ TY ++
Sbjct: 337 LEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDC 396
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+GN+ KL M + G P + LC+ G+ + A + A + G P+
Sbjct: 397 FCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPN 456
Query: 357 FSTMKSLVTG 366
T L+ G
Sbjct: 457 DITYNILLEG 466
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 41/266 (15%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ--ANMIDHAM 131
D FS ++ L + + S L +E+ + + F ++++ GQ +D A+
Sbjct: 211 DVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTF---TVLIDGQCKGGKVDLAL 267
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F+ M G+R + NAL+ G + +E +R+ E G+ P+ T+ +I
Sbjct: 268 KNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM-SASGLRPDRITFTTLIDG 326
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG-------------- 237
C+ GD S I M + I + F +L++G ++ + D
Sbjct: 327 CCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPD 386
Query: 238 ---------------------KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
K+L+ M+ G GV YN + LCK + + AK LLD
Sbjct: 387 DPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLD 446
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGN 302
ML+ G+ PN TY L+ G K G+
Sbjct: 447 AMLNVGVAPNDITYNILLEGHSKHGS 472
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 43/106 (40%)
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
+L G PN + L+HGF K G + A+ +F + G P F C+ G
Sbjct: 133 VLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGA 192
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
E ++ ++ P T +L+ GL ++ E + L M
Sbjct: 193 VEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 238
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 126/278 (45%), Gaps = 5/278 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + I A E M +G + N L G + +E ++ E + + P
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN ++ + + SS ++L EMR K ++ + +++ G +E + E+ L
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+MM + G+A V YN I + CK + +A L+D M+ G+K + T L++ KE
Sbjct: 410 KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 469
Query: 301 GNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
E A++L S G PD SY M YF + + E AL + + P
Sbjct: 470 KRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYF--KENKPEPALYLWDEMSKRKLTPSIY 527
Query: 359 TMKSLVTGLASISKVAEA-NELIGLMKKRFPKSGDMWN 395
T +L+ GL +I K+ EA ++L LMKK +N
Sbjct: 528 TYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYN 565
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 122/277 (44%), Gaps = 9/277 (3%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I Y +A + A +EM + GL+ LN LL K YEE + + P+ G
Sbjct: 428 IDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQ-RG 486
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY-EDV 236
P+ +Y V+ ++ + + EM ++ + P+ + L+ G K E +
Sbjct: 487 FVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAI 546
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+ ++M+K G+ YNI I + CK E+A + ML KP++ T L++G
Sbjct: 547 DKLNELMKK-GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNG 605
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
G LE A KLF S G + D + LC+ G+ +TAL A+G P
Sbjct: 606 LCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPD 665
Query: 357 FSTMKSLVTGLASISKVAEANELI------GLMKKRF 387
T +++ L+ + EA ++ G + +RF
Sbjct: 666 AFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERF 702
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 42/295 (14%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK---RIFTEFPKVYGIEPNSETYN 186
A+ EEM G++ S+ N ++ G EE ++ TE G+ P+ TYN
Sbjct: 370 ALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTE----EGLAPDVITYN 425
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIR-------------------------------- 214
+I ++C++ + + + ++ EM R ++
Sbjct: 426 TLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQR 485
Query: 215 ---PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
P+ +G ++A ++KE+K E + M K + + YN I+ LC + + EA
Sbjct: 486 GFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEA 545
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L+ ++ +G+ P+ TY +IH + KEG+LE A + M +PD
Sbjct: 546 IDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNG 605
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC G+ E A+K+ + KG T +L+ L V A M+ R
Sbjct: 606 LCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEAR 660
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 119/309 (38%), Gaps = 42/309 (13%)
Query: 99 EELKTRPDLR---QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
EEL P R +E + + Y + N + A+ ++EM K L S+ N L+ G
Sbjct: 476 EELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKG 535
Query: 156 -CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
C + K E + ++ K G+ P+ TYN +I ++C+ GD + +M +
Sbjct: 536 LCTIGKLTEAIDKLNELMKK--GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFK 593
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ L+ G K E K+ + + G V YN IQ+LCK + A
Sbjct: 594 PDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHF 653
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG----------------- 317
M +RG++P+ TY ++ + G E A+ + + G
Sbjct: 654 FADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEE 713
Query: 318 ------------CEP-------DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
CE D + LC GG+ + A V M KG S
Sbjct: 714 VKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSS 773
Query: 359 TMKSLVTGL 367
T +L+ GL
Sbjct: 774 TYITLMEGL 782
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 1/209 (0%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G+ P+ TYN ++K+ C G ++LA M+++ I P + L++ + + +
Sbjct: 239 FGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGWIKQ 298
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI-KPNLDTYKHLI 294
V++ M G + YN+ LC+ + +EA L D M I P++ TY L+
Sbjct: 299 ATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLV 358
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K A L M + G + + LC+ G+ E AL + +G
Sbjct: 359 DACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLA 418
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLM 383
P T +L+ VA+A L+ M
Sbjct: 419 PDVITYNTLIDAYCKARNVAKAFVLMDEM 447
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 9/219 (4%)
Query: 178 IEPNSETYNKVIKSFCESGDSS-----SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ P+ + N V+ + S +S V+ L +R + PN F LL+ +
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALR---LHPNHYTFNLLVHTHCSKGT 225
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
D L M+ G++ V YN +++ C+ EA+ LL M GI P TY
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
L+ + + G ++ A + +MT G EPD + + + LCQ G+ + A K+
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345
Query: 353 WV-PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
V P T +LV + ++A L+ M+ + KS
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKS 384
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 109/254 (42%), Gaps = 44/254 (17%)
Query: 82 VSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYG 141
+ KL++A + +++L+++ D N H Y + ++ A Q +M +
Sbjct: 539 IGKLTEA--IDKLNELMKKGLVPDDTTYNIIIHA-----YCKEGDLEKAFQFHNKMLENY 591
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
+ V N L+ G L E+ ++F + + G + + TYN +I++ C+ GD +
Sbjct: 592 FKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAE-KGKKVDVITYNTLIQALCKDGDVDTA 650
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-------------- 247
A+M + ++P+A + ++L+ + + E+ +L +++ G
Sbjct: 651 LHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSS 710
Query: 248 ---------------IASGVNV-------YNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
SG N YN ++ LC + +EAKA+LD M+ +G+
Sbjct: 711 AEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSV 770
Query: 286 NLDTYKHLIHGFGK 299
+ TY L+ G K
Sbjct: 771 DSSTYITLMEGLIK 784
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 145/334 (43%), Gaps = 27/334 (8%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F++ + + L+E +K +L + E +++ + L +++ + E
Sbjct: 297 TFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEM 356
Query: 137 MDKYGLRQSVDALNALLLGCILSKN-YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+DK G+ ++ + N ++ G L KN R+ GI P++ TY+ ++ C +
Sbjct: 357 VDK-GIEPNIYSFNTVMDG--LCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +IL EM R+ PN +LL +KE + + K+LQ M +
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIK-----------------------PNLDTYKH 292
NI I LCK + +EA +++GM G P+L TY
Sbjct: 474 NIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSI 533
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I+G K G L+ A+K F M PDS + F + C+ G+ +A +V + +G
Sbjct: 534 IINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRG 593
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ GL S +++ E L+ MK++
Sbjct: 594 CNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEK 627
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 148/326 (45%), Gaps = 10/326 (3%)
Query: 65 ASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA 124
A ++PE+ ++ ++ L + F ++ +++ + R NE + Y +A
Sbjct: 145 AGVSPET----YTLNLLIAGLCDSGRFEDAREVFDKMGVK-GCRPNEFSFGILVRGYCRA 199
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
+ A++ + M +G++ + N L+ EE +R+ E + G+ P+ T
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERL-VERMREDGLFPDVVT 258
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKS----IRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+N I + C +G I +M+ RPN T F L+L GF KE E+ ++
Sbjct: 259 FNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLV 318
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M++ G + YNI + L + + EA+ L M+ +GI+PN+ ++ ++ G K
Sbjct: 319 ESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKN 378
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G + A+ + M + G PD+ + + C G+ A + M +G P+ T
Sbjct: 379 GLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTC 438
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
L+ L ++ EA +L+ M +R
Sbjct: 439 NILLHSLWKEGRIFEAEKLLQKMNER 464
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 121/283 (42%), Gaps = 42/283 (14%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + +SI ++ L +A + + E+ + PD + F +HS +G+ I A
Sbjct: 527 DLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTF-IHSFCKHGK---ISSA 582
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++M+K G +S+ N+L+LG E+ + + K GI PN TYN +I
Sbjct: 583 FRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDM-KEKGITPNICTYNNMIS 641
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM-MEKCG-- 247
CE G S+L EM +K I PN + F LL+ F K + V +V ++ + CG
Sbjct: 642 CLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHK 701
Query: 248 ------------IASGVN-------------------VYNIRIQSLCKLKRSEEAKALLD 276
I V+ YN I+ LCK + E A +L
Sbjct: 702 EALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILH 761
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
M+ +G + + ++ +I G GK G A +L M + E
Sbjct: 762 KMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASE 804
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E ++ F E + P+S Y+ I SFC+ G SS + +L +M ++ + +
Sbjct: 545 DEARKKFIEMVG-KSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNS 603
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ G +++ ++ +L M++ GI + YN I LC+ R ++A +LLD ML +G
Sbjct: 604 LILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKG 663
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
I PN+ +++ LI F K + K++F + ++ MF L GGE A
Sbjct: 664 ISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLI-GGEVSEAK 722
Query: 343 KVCRASMAK 351
++ A++ +
Sbjct: 723 ELFDAALDR 731
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 86/210 (40%), Gaps = 4/210 (1%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P YN V++S S + +M + P LL+AG ++ED +V
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M G + I ++ C+ S A LLDGM S G++PN Y LI F +
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV----P 355
EG E A++L M G PD F LC G+ A ++ R + P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ +T ++ G + EA L+ MK+
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKR 323
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 7/173 (4%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TY+ +I C++G EM KS+ P++ + + F K K +V
Sbjct: 526 PDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRV 585
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ MEK G + YN I L + E LLD M +GI PN+ TY ++I +
Sbjct: 586 LKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCE 645
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE-------YETALKVC 345
G ++ A L M G P+ F + C+ + +E AL +C
Sbjct: 646 GGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSIC 698
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 94/231 (40%), Gaps = 5/231 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGL-RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
+A+ I MQ EE+ GL R ++ N +L G EE K + E K G
Sbjct: 274 EASRIFRDMQIDEEL---GLPRPNITTFNLMLEGFCKEGMLEEAKTL-VESMKRNGNLME 329
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
E+YN + +G L EM K I PN F ++ G K D ++
Sbjct: 330 LESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMG 389
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+M GI Y+ + C + +A +L M+ RG PN T L+H KEG
Sbjct: 390 LMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEG 449
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+ A+KL M + D+ + LC+ G+ + A+++ G
Sbjct: 450 RIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHG 500
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 77/219 (35%), Gaps = 23/219 (10%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEM-----------------------RRKSIRPNATDF 220
T N VI C+SG I+ M K P+ +
Sbjct: 472 TCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITY 531
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+++ G K + ++ K M + +Y+ I S CK + A +L M
Sbjct: 532 SIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEK 591
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
RG +L TY LI G G + + L M G P+ + LC+GG +
Sbjct: 592 RGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKD 651
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A + + KG P+ S+ + L+ S E+
Sbjct: 652 ATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEV 690
>gi|473874|gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 1/234 (0%)
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
L+ G I K++ IF + + G++P+ YN +I++FC G+ I+ +M+++
Sbjct: 2 LINGFIYLKDWANAFAIFEDVIR-DGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKE 60
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
RP + F ++ F K V MM + G V YN I L + ++ ++A
Sbjct: 61 RHRPTSRTFMPIIHAFAKAGAIRKALDVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKA 120
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
++D ML GI+PN TY ++ G+ G+ A + F+ + + G E D Y +
Sbjct: 121 VEVVDEMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRIKDEGLELDVYTYEALLKA 180
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
C+ G E+AL V + AK + L+ G A S V EA +L+ M++
Sbjct: 181 CCKSGRIESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLMQQMRQ 234
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 136/336 (40%), Gaps = 7/336 (2%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
LK +N F I + L P D + ++ + + + +++E++K + R
Sbjct: 9 LKDWANAFAIFEDVIRDGLKP----DVVLYNNIIRAFCGMGNMDRALRIVEQMK-KERHR 63
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
R + I + +A I A+ F+ M + G +V NAL+LG + + ++ +
Sbjct: 64 PTSRTFMPIIHAFAKAGAIRKALDVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKAVEV 123
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
E + GI PN TY ++ + GD+ + + ++ + + + + LL
Sbjct: 124 VDEM-LLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRIKDEGLELDVYTYEALLKACC 182
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K + E V + M I VYNI I + EA L+ M G++P++
Sbjct: 183 KSGRIESALAVTKEMNAKNIPRNTFVYNILIDGWARRSDVWEAADLMQQMRQEGVQPDIH 242
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY ++ K G+++ A M G P +Y + E ALK
Sbjct: 243 TYTSFVNACCKAGDMQKAMNTIQEMKRVGLNP-MLKPIPLSYTVGHASLPEKALKCFEEM 301
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G P + L+T L S + VAE + G+ +
Sbjct: 302 KKSGLKPDKAVYHCLMTSLLSRATVAEDYIITGIHR 337
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%)
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ GF + + + + + + G+ V +YN I++ C + + A +++ M
Sbjct: 1 MLINGFIYLKDWANAFAIFEDVIRDGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKKE 60
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+P T+ +IH F K G + A +F M GC P + L + + + A
Sbjct: 61 RHRPTSRTFMPIIHAFAKAGAIRKALDVFDMMRRSGCIPTVQTYNALILGLVEKRQMDKA 120
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
++V + G P+ T +++ G AS+ +A E +K
Sbjct: 121 VEVVDEMLLAGIRPNERTYTTIMDGYASLGDTGKAFEYFSRIK 163
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 3/267 (1%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
LY + + A+ +EM+ G++ + + L+ G I ++ IF E + G++
Sbjct: 447 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRS-GLQ 505
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ YN +I++FC+ G+ IL +M+++ ++P+ F ++ G+ +
Sbjct: 506 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 565
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L +M + G V YN I L + + + A ++LD M GI PN TY ++ G+
Sbjct: 566 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 625
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G++ A + F + G + D Y + C+ G ++AL V R M+ +P +
Sbjct: 626 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR-EMSFQKIPRNTF 684
Query: 360 MKS-LVTGLASISKVAEANELIGLMKK 385
+ + L+ G A V EA +L+ MK+
Sbjct: 685 IYNILIDGWARRGDVWEAEDLMKQMKE 711
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 141/310 (45%), Gaps = 2/310 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI +S ++ N + L +E KT+ N + + I + Q+ ++ A +
Sbjct: 334 VTYSILISGFAKINDSQSADNLFKEAKTKLS-SLNGIIYSNIIHAHCQSGNMERAEELVC 392
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D ++++ G + +N + +F K G +P+ +Y ++ + +
Sbjct: 393 EMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL-KECGFKPSIISYGCLLNLYVKI 451
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + SI EM I+ N + +L+ GF H + + + + M + G+ +Y
Sbjct: 452 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 511
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N+ I++ CK+ + A +L+ M ++P+ ++ +I G+ G+++ A M
Sbjct: 512 NLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRR 571
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + + L + + + A+ V G P+ T ++ G A+ + +
Sbjct: 572 SGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGK 631
Query: 376 ANELIGLMKK 385
A E +K+
Sbjct: 632 AFEYFTKIKE 641
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 139/331 (41%), Gaps = 6/331 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N F I + + L P DR +++ + + + + +LE+++ + ++ + R
Sbjct: 490 ANAFAIFEEMLRSGLQP----DRAIYNLLIEAFCKMGNMDRAICILEKMQ-KERMQPSNR 544
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I Y A + A+ T + M + G +V NAL+ G + + + +
Sbjct: 545 AFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM 604
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ GI PN TY +++ + SGD + +++ ++ + + LL K +
Sbjct: 605 -SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 663
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ V + M I +YNI I + EA+ L+ M G+ PN+ TY
Sbjct: 664 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTS 723
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
I+ K G+++ A+K+ M + G +P+ + + + ALK G
Sbjct: 724 YINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 783
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P ++ LVT L S + V E + G++
Sbjct: 784 LKPDEASYHCLVTSLLSRATVMEGSTYTGII 814
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 8/298 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S+ ++ + F + EE+ R L+ + + I + + +D A+ E+
Sbjct: 475 TYSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 533
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K ++ S A ++ G ++ + + + + G P TYN +I
Sbjct: 534 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL-DLMRRSGCVPTVMTYNALIHGLVRKH 592
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---GIASGVN 253
S+L +M I PN + +++ G+ D+GK + K G+ V
Sbjct: 593 KVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG---DIGKAFEYFTKIKESGLKLDVY 649
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y +++ CK R + A A+ M + I N Y LI G+ + G++ A+ L M
Sbjct: 650 IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQM 709
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G P+ + + + C+ G+ + A KV + G P+ T +L+ G A +S
Sbjct: 710 KEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVS 767
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 9/218 (4%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
N++ V F PK P+ + +I + + GD + MR + I PNA F
Sbjct: 247 NWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVF 301
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ + ++ M+ G+ + Y+I I K+ S+ A L +
Sbjct: 302 TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKT 361
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQGGEY 338
+ N Y ++IH + GN+E A++L M G + D Y M Y + Q
Sbjct: 362 KLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQN--E 419
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
L V G+ P + L+ I KVA+A
Sbjct: 420 NKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKA 457
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 36/303 (11%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV Y + HA TFE M G+ + +L+ ++++ E K G
Sbjct: 270 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM-KSEG 328
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+E TY+ +I F + DS S ++ E + K N + ++ + E
Sbjct: 329 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAE 388
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL---------- 287
+++ ME+ GI + ++VY+ + ++ + + + + G KP++
Sbjct: 389 ELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLY 448
Query: 288 -------------------------DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
TY LI+GF + A +F M G +PD
Sbjct: 449 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 508
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+ G + A+ + + P + ++ G A + A + + L
Sbjct: 509 AIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDL 568
Query: 383 MKK 385
M++
Sbjct: 569 MRR 571
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 17/312 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D F+ + L + N + ++L++ + R PD F +H + G+ N
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPD-NMTYGFLLHGLCRIGKLN----- 340
Query: 131 MQTFEEMDKYGLRQSVD---ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
E K ++ LN L+ G ++S +E + E +G +P+ TYN
Sbjct: 341 -----EARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+ G S ++ EM R+ PN + +L+ G K E+ G VL M G
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ +YN I +LC+ ++ A LL M ++G KP+L TY LI+G K ++ A
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF +M G ++ + + L + G ++ AL + + +G T L+
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575
Query: 368 ASISKVAEANEL 379
+ + + EL
Sbjct: 576 CKVGNIEKGLEL 587
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 35/343 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + ++KL F I +LL ++K + + F + + YG+A A++ +
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMI-IMKHYGKAGQPGQAIRLLLD 172
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEV-KRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M L + L+L +++ N +V +F + G+ P T+ V+K+ C
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLS-KGVSPTVFTFGIVMKALCMF 231
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ S S+L +M + PN+ + L+ ++++ + K+L+ M G V +
Sbjct: 232 NEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTF 291
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA---- 311
N I LCK+ + +A L+D ML RG P+ TY L+HG + G L A+K+
Sbjct: 292 NDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC 351
Query: 312 ----------------------------SMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+M N G +PD + + + + LC+ G A
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +G P+ T LV GL + EA ++ M R
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 125/316 (39%), Gaps = 11/316 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHAM 131
+ + + + LSQ N + +LLEE+ + + F+ +H + + N I A
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC---KVNKIHDAT 308
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ + M G LL G E ++I + P PN+ N +I
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC-----PNNAILNTLING 363
Query: 192 FCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ SG S L E M +P+ + +L+ G KE ++ M + G
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I + LCK EEA +L M +RG+ N Y LI ++ + A L
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M GC+PD + + Y LC+ + A ++ + G V + T +L+ L
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543
Query: 371 SKVAEANELIGLMKKR 386
+A L+ M R
Sbjct: 544 GAFQKALTLVNDMLFR 559
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 2/292 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++I V+ L +A +L E+ R L N + I + + A+
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSAR-GLTINSVIYNCLICALCRKEKVHVALNLLS 484
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM G + + N+L+ G +E R+F + G N+ TYN +I +
Sbjct: 485 EMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM-LLDGAVANNVTYNTLIHALLRR 543
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +++ +M + + + L+ F K E ++ + M G+ +
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
NI I LCK+ + + A L ++RG P++ TY +++G K G ++ A LF +
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G PD++ + F + C+ G A + G+VP T LV L
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTL 715
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 12/265 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMI 127
++ + ++ + L + + LL E+ T+ PDL F +S++ YG + + I
Sbjct: 458 INSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL-----FTYNSLI-YGLCKVDRI 511
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + F M G + N L+ + +++ + + G + TYN
Sbjct: 512 DEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM-LFRGCTLDKITYNG 570
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+IK+FC+ G+ + +M + + +++ G K K ++ + L+ G
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YN + LCK+ R +EA L D + G++P+ TY I KEG + A
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDAC 690
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFL 332
F G P + + + Y L
Sbjct: 691 SFFYRGIENGFVPSNLTWNVLVYTL 715
>gi|297810021|ref|XP_002872894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318731|gb|EFH49153.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1162
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 156/363 (42%), Gaps = 64/363 (17%)
Query: 49 LKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ S+S+P +I AS P + ++ I + KL +A +FN I +L + ++
Sbjct: 60 IASQSDPLLAKEIFDYASQQPNFRHSQSSYLILILKLGRARYFNLIDDVLAKHRSSGYPL 119
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
E F + I +Y +A + + ++TF +M ++ LN +L + + Y +++
Sbjct: 120 TGEIF-TYLIKVYAEAKIPEKVLRTFYKMLEFNFTPQPKHLNRILEVLVSHRGY--LQKA 176
Query: 169 FTEF--PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
F F +++G+ PN+ +YN ++++FC + D S Y + +M + + P+ + +L+ G
Sbjct: 177 FELFKSSRLHGVMPNTRSYNILMQAFCLNDDLSIAYQLFGKMLERDVVPDVESYKILIKG 236
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI--- 283
F C+ + A LL+ ML++G
Sbjct: 237 F-----------------------------------CRKGQVNGAMELLEDMLNKGFVPD 261
Query: 284 ----KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN--GGCEPDSYCFFMFTYFLCQGGE 337
P+L Y +I GF +E A+K+ M GG LC G
Sbjct: 262 RLSCNPDLVHYNTIILGFCREDRAMDARKVLDDMLTLIGG--------------LCDQGM 307
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNA 396
++ K + ++KG+ PHFS LV G S KV EA +++ +MK D W
Sbjct: 308 FDEGKKYLQEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGEILHSDTWEM 367
Query: 397 ALP 399
+P
Sbjct: 368 IIP 370
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 3/267 (1%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
LY + + A+ +EM+ G++ + + L+ G I ++ IF E + G++
Sbjct: 448 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRS-GLQ 506
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ YN +I++FC+ G+ IL +M+++ ++P+ F ++ G+ +
Sbjct: 507 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 566
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L +M + G V YN I L + + + A ++LD M GI PN TY ++ G+
Sbjct: 567 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 626
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G++ A + F + G + D Y + C+ G ++AL V R M+ +P +
Sbjct: 627 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR-EMSFQKIPRNTF 685
Query: 360 MKS-LVTGLASISKVAEANELIGLMKK 385
+ + L+ G A V EA +L+ MK+
Sbjct: 686 IYNILIDGWARRGDVWEAEDLMKQMKE 712
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 141/310 (45%), Gaps = 2/310 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI +S ++ N + L +E KT+ N + + I + Q+ ++ A +
Sbjct: 335 VTYSILISGFAKINDSQSADNLFKEAKTKLS-SLNGIIYSNIIHAHCQSGNMERAEELVR 393
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D ++++ G + +N + +F K G +P+ +Y ++ + +
Sbjct: 394 EMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL-KECGFKPSIISYGCLLNLYVKI 452
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + SI EM I+ N + +L+ GF H + + + + M + G+ +Y
Sbjct: 453 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 512
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N+ I++ CK+ + A +L+ M ++P+ ++ +I G+ G+++ A M
Sbjct: 513 NLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRR 572
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + + L + + + A+ V G P+ T ++ G A+ + +
Sbjct: 573 SGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGK 632
Query: 376 ANELIGLMKK 385
A E +K+
Sbjct: 633 AFEYFTKIKE 642
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 139/331 (41%), Gaps = 6/331 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N F I + + L P DR +++ + + + + +LE+++ + ++ + R
Sbjct: 491 ANAFAIFEEMLRSGLQP----DRAIYNLLIEAFCKMGNMDRAICILEKMQ-KERMQPSNR 545
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I Y A + A+ T + M + G +V NAL+ G + + + +
Sbjct: 546 AFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM 605
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ GI PN TY +++ + SGD + +++ ++ + + LL K +
Sbjct: 606 -SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 664
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ V + M I +YNI I + EA+ L+ M G+ PN+ TY
Sbjct: 665 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTS 724
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
I+ K G+++ A+K+ M + G +P+ + + + ALK G
Sbjct: 725 YINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 784
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P ++ LVT L S + V E + G++
Sbjct: 785 LKPDEASYHCLVTSLLSRATVMEGSTYTGII 815
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 125/298 (41%), Gaps = 8/298 (2%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S+ ++ + F + EE+ R L+ + + I + + +D A+ E+
Sbjct: 476 TYSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEK 534
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K ++ S A ++ G ++ + + + + G P TYN +I
Sbjct: 535 MQKERMQPSNRAFRPIIEGYAVAGDMKSALDTL-DLMRRSGCVPTVMTYNALIHGLVRKH 593
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---GIASGVN 253
S+L +M I PN + +++ G+ D+GK + K G+ V
Sbjct: 594 KVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG---DIGKAFEYFTKIKESGLKLDVY 650
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y +++ CK R + A A+ M + I N Y LI G+ + G++ A+ L M
Sbjct: 651 IYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQM 710
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G P+ + + + C+ G+ + A KV + G P+ T +L+ G A +S
Sbjct: 711 KEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVS 768
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 113/303 (37%), Gaps = 36/303 (11%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV Y + HA TFE M G+ + +L+ ++++ E K G
Sbjct: 271 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM-KSEG 329
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+E TY+ +I F + DS S ++ E + K N + ++ + E
Sbjct: 330 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAE 389
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL---------- 287
++++ ME+ GI + ++VY+ + ++ + + + + G KP++
Sbjct: 390 ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLY 449
Query: 288 -------------------------DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
TY LI+GF + A +F M G +PD
Sbjct: 450 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 509
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+ G + A+ + + P + ++ G A + A + + L
Sbjct: 510 AIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDL 569
Query: 383 MKK 385
M++
Sbjct: 570 MRR 572
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 9/218 (4%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
N++ V F PK P+ + +I + + GD + MR + I PNA F
Sbjct: 248 NWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVF 302
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ + ++ M+ G+ + Y+I I K+ S+ A L +
Sbjct: 303 TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKT 362
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQGGEY 338
+ N Y ++IH + GN+E A++L M G + D Y M Y + Q
Sbjct: 363 KLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQN--E 420
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
L V G+ P + L+ I KVA+A
Sbjct: 421 NKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKA 458
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 9/292 (3%)
Query: 97 LLEELKTR--PDL-RQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
L EE+ PD+ N H H QA+ + A+ F+ M K G++ S++ N+LL
Sbjct: 389 LFEEMADSGLPDVFTYNNLIHWHC-----QAHKLREALNLFDRMKKAGVKPSINTYNSLL 443
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
+G +E ++++E P + G +PN TY +++ + D + Y++L EM++ +
Sbjct: 444 MGYCKKGCMDEAVKLYSEMP-MEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
N + +L+ G + +V +L+ G + YN I K A
Sbjct: 503 SCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFT 562
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+ M +G+ PN+ TY I G+ + G + A K+ + G +PD + C
Sbjct: 563 VYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFC 622
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
Q G AL++ + G P+ SL+TG +++ + E ++ M K
Sbjct: 623 QEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIK 674
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 4/271 (1%)
Query: 117 SIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
S+VL G N A+ FEEM GL N + C K E +F K
Sbjct: 371 SLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHK-LREALNLFDRMKK 429
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G++P+ TYN ++ +C+ G + +EM + +PN + L+ G+ + ++
Sbjct: 430 A-GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFD 488
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ +L M++ G++ YN+ I +C + R E +L +S G P + TY +I
Sbjct: 489 NAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSII 548
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+GF K G + A ++ M G P+ + F C+ G + ALK+ +G
Sbjct: 549 NGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQ 608
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P +L+ G ++ A +L+ ++ K
Sbjct: 609 PDIVAYNALINGFCQEGNMSHALQLLVILLK 639
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ PN TY I +C +G S +L ++RR+ ++P+ + L+ GF +E
Sbjct: 571 GLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHA 630
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L ++ K G+A VYN I L +E + M+ GI + TY LI G
Sbjct: 631 LQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDG 690
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+GN+ A +L++ M G PD++ F T+ LC+ G+ + A K+ P+
Sbjct: 691 FSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPN 750
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
L+ G K+ EA L
Sbjct: 751 VFIYNMLINGYLRDCKLQEAFRL 773
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 1/258 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D+A +EM + G+ + N L+ G + EV + F G P TYN
Sbjct: 488 DNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMS-EGFIPTMMTYNS 546
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I F ++G S +++ +MR K + PN + + G+ + + K+L + + G
Sbjct: 547 IINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + YN I C+ A LL +L G+ PN Y LI G+ ++
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVS 666
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
K + SM GG D+ + + G AL++ MAKG++P T +L GL
Sbjct: 667 KFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGL 726
Query: 368 ASISKVAEANELIGLMKK 385
+ A +L+ M++
Sbjct: 727 CRSGDIDGAKKLLEEMRR 744
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ +A M+ A +++M + GL ++ + + G + + ++ + + G++P
Sbjct: 551 FVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRR-RGLQP 609
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ YN +I FC+ G+ S +L + + + PN + L+ G+ + ++V K
Sbjct: 610 DIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFY 669
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K GI + + Y I K A L M+++G P+ T+ L HG +
Sbjct: 670 ESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRS 729
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G+++GAKKL M P+ + + M + + + A ++ + G P +T
Sbjct: 730 GDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTY 789
Query: 361 KSLVT 365
LV+
Sbjct: 790 DILVS 794
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 112/290 (38%), Gaps = 14/290 (4%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
++ ++K+R DL ++ + + A+ F EM G R +AL+ C
Sbjct: 153 VVPDIKSRTDL----------LIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSAC 202
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+ +E+ R+F E P I+P+ Y I + C+ GD +L EM+
Sbjct: 203 LKEGMHEDAVRLFDEMPGAE-IDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTC 261
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ ++ K + E+ +V M G V V ++ C + A L
Sbjct: 262 DFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFK 321
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
L GI P Y LI G + G + A +L MT G P ++ + L
Sbjct: 322 ETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDR 381
Query: 337 EYETALKVCR-ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
++ A VC MA +P T +L+ K+ EA L MKK
Sbjct: 382 RWKDA--VCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKK 429
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 81/203 (39%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ ++ ++ + ++ EMR + R +A F L++ KE +ED
Sbjct: 152 GVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDA 211
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M I VY + I +LCKL A +L M G TY+ ++
Sbjct: 212 VRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDV 271
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G +E A ++ M + G + D C E AL + + ++ G VP
Sbjct: 272 LVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPT 331
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
L+ G + +A EL
Sbjct: 332 KVMYGVLIRGCDQVGMTQKAYEL 354
>gi|298712182|emb|CBJ33054.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 903
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+ +M K G++ V + N ++ C ++ + E P+ G+ P+ T+N
Sbjct: 475 RALSLLRDMPKRGVKPVVISYNTVISACGKCGEGDQALALLREMPE-RGLMPDVITFNSA 533
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I + SG ++ EM R + +A + L G ++E +L+ M+ G+
Sbjct: 534 IAALSNSGRPDDAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGV 593
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ V Y I++ + + +EA LL M + G+ PNL +Y I GK+G E
Sbjct: 594 SPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLA 653
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M G P+ +C+ GG++E A+ R+ +A G P S V+ LA
Sbjct: 654 LLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALA 713
Query: 369 SISKVAEANELIGLMKK 385
+V A EL+ MK+
Sbjct: 714 HCGEVDLALELLSEMKE 730
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 129/314 (41%), Gaps = 10/314 (3%)
Query: 68 APESPLDRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIV-LYGQ 123
AP + + +S +S++++ + +L EL P+ + V++ + G+
Sbjct: 117 APAAAVSTFVYSKCISRMAKCFRWGEALDILARMAELGAMPN-----SYCVNAALDACGK 171
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSE 183
A + A+ + G+ V + N + C+ ++E + E YGI+PN
Sbjct: 172 AGRVQEALGLMRDARASGIELDVVSYNCAIPACVTGGDWELALSMIREMEAEYGIKPNHI 231
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY IK G + S+L EM+ + + + + F + ++ L+ +
Sbjct: 232 TYQAAIKVCGRCGKADEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAASTLREI 291
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS-RGIKPNLDTYKHLIHGFGKEGN 302
+ V YN+ I + EEA LL M G++P++ TY ++ GK G
Sbjct: 292 HDWPVKPNVFNYNLAICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQ 351
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
E A ++F M+ G +PD F G E AL + R G P+ T +
Sbjct: 352 GEKAIEIFREMSEVGIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNA 411
Query: 363 LVTGLASISKVAEA 376
+++ + + EA
Sbjct: 412 VMSACIAAGQWEEA 425
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 2/271 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +++ A+S + LL ++ R ++ + I G+ D A+
Sbjct: 456 DACSYNTALSACEVGEQWGRALSLLRDMPKR-GVKPVVISYNTVISACGKCGEGDQALAL 514
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EM + GL V N+ + S ++ R+ E P+ G+ ++ TY+ +
Sbjct: 515 LREMPERGLMPDVITFNSAIAALSNSGRPDDAVRLMREMPRA-GVAADAITYSSALTGLA 573
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+G S+L EM+ + P + + + K ++ +L+ M G+ +
Sbjct: 574 HAGRWEQALSLLREMQGAGVSPTVICYTAAIRACGEAGKGDEALLLLREMPTAGVTPNLF 633
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+ I + K R E+ ALL+ M + G+ PN Y I G G G E A F SM
Sbjct: 634 SYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCYTAAITGCGIGGQWERAVATFRSM 693
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
G +P + L GE + AL++
Sbjct: 694 IASGIQPTVVGYTSAVSALAHCGEVDLALEL 724
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 125/325 (38%), Gaps = 4/325 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
++++ +S + + LL E+ R + F+ +I + D A++
Sbjct: 493 ISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFN-SAIAALSNSGRPDDAVRLMR 551
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + G+ ++ L G + +E+ + E + G+ P Y I++ E+
Sbjct: 552 EMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREM-QGAGVSPTVICYTAAIRACGEA 610
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +L EM + PN + ++ K+ ++E +L M G+ Y
Sbjct: 611 GKGDEALLLLREMPTAGVTPNLFSYSATISACGKDGRWEQGLALLNEMPALGLTPNEFCY 670
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + E A A M++ GI+P + Y + G ++ A +L + M
Sbjct: 671 TAAITGCGIGGQWERAVATFRSMIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKE 730
Query: 316 -GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G EP+ + GG+ +V R + G P + S + +
Sbjct: 731 EAGIEPNEQTYAAVILACGNGGQGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWS 790
Query: 375 EANELIGLMKKR-FPKSGDMWNAAL 398
EA L+G M+ P + +NAA+
Sbjct: 791 EATSLLGEMEAAGVPPTVSCYNAAI 815
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 161/447 (36%), Gaps = 71/447 (15%)
Query: 9 TNFNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDIC--CG-- 64
+ L V+Y N A + ++ GD AL++ + A + + +C CG
Sbjct: 188 SGIELDVVSY-NCAIPACVTGGDWELALSMIREMEAEYGIKPNHITYQAAIKVCGRCGKA 246
Query: 65 ---ASLAPE-----SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
ASL E PL +S + + +H+ A + L E+ P ++ N +
Sbjct: 247 DEAASLLIEMKDGGVPLKTSVYSAVFNAFRRVDHWQAAASTLREIHDWP-VKPNVFNYNL 305
Query: 117 SIVLYGQANMIDHAMQTFEEMDKYG-LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
+I + A+ M + G + V N ++ C + E+ IF E +V
Sbjct: 306 AICTCTDCGEWEEALDLLHFMREVGGVEPDVVTYNIVVAACGKAGQGEKAIEIFREMSEV 365
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI+P+ ++ I + G S SI EM R +RPN +++ ++E+
Sbjct: 366 -GIKPDVISFTTAISACGSCGLSEEALSIFREMERAGVRPNIITHNAVMSACIAAGQWEE 424
Query: 236 V------------------------------------------------GKVLQM---ME 244
G+ L + M
Sbjct: 425 ALDFFTEVVDGSGAANGGGGGGPPPDPVEVADACSYNTALSACEVGEQWGRALSLLRDMP 484
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
K G+ V YN I + K ++A ALL M RG+ P++ T+ I G +
Sbjct: 485 KRGVKPVVISYNTVISACGKCGEGDQALALLREMPERGLMPDVITFNSAIAALSNSGRPD 544
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +L M G D+ + L G +E AL + R G P T+
Sbjct: 545 DAVRLMREMPRAGVAADAITYSSALTGLAHAGRWEQALSLLREMQGAGVSP---TVICYT 601
Query: 365 TGLASISKVAEANELIGLMKKRFPKSG 391
+ + + + +E + L+ + P +G
Sbjct: 602 AAIRACGEAGKGDEAL-LLLREMPTAG 627
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 92/237 (38%), Gaps = 1/237 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++S +S + + LL E+ L NE + +I G + A+ TF
Sbjct: 634 SYSATISACGKDGRWEQGLALLNEMPAL-GLTPNEFCYTAAITGCGIGGQWERAVATFRS 692
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G++ +V + + + + +E + GIEPN +TY VI + G
Sbjct: 693 MIASGIQPTVVGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGG 752
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
V + +M I P T + + + + + +L ME G+ V+ YN
Sbjct: 753 QGHLVAQVQRDMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEMEAAGVPPTVSCYN 812
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
I + K + +EA LLD M +G+ + T I K G A L M
Sbjct: 813 AAITACGKSGKWQEALDLLDEMPGKGLVRDSGTLSAAISACQKAGRGVKAAGLVEEM 869
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 2/170 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ AVS L+ + +LL E+K + NE+ + I+ G Q
Sbjct: 703 VGYTSAVSALAHCGEVDLALELLSEMKEEAGIEPNEQTYAAVILACGNGGQGHLVAQVQR 762
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M G+ + + + N+ E + E + G+ P YN I + +S
Sbjct: 763 DMASAGITPRLTGYLSAIRASGECGNWSEATSLLGEM-EAAGVPPTVSCYNAAITACGKS 821
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK-YEDVGKVLQMME 244
G +L EM K + ++ ++ K + + G V +M+E
Sbjct: 822 GKWQEALDLLDEMPGKGLVRDSGTLSAAISACQKAGRGVKAAGLVEEMLE 871
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 17/312 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D F+ + L + N + ++L++ + R PD F +H + G+ N
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPD-NMTYGFLLHGLCRIGKLN----- 340
Query: 131 MQTFEEMDKYGLRQSVD---ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
E K ++ LN L+ G ++S +E + E +G +P+ TYN
Sbjct: 341 -----EARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNI 395
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ C+ G S ++ EM R+ PN + +L+ G K E+ G VL M G
Sbjct: 396 LMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARG 455
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ +YN I +LC+ ++ A LL M ++G KP+L TY LI+G K ++ A
Sbjct: 456 LTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAF 515
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+LF +M G ++ + + L + G ++ AL + + +G T L+
Sbjct: 516 RLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAF 575
Query: 368 ASISKVAEANEL 379
+ + + EL
Sbjct: 576 CKVGNIEKGLEL 587
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 143/343 (41%), Gaps = 35/343 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ + ++KL F I +LL ++K + + F + + YG+A A++ +
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMI-IMKHYGKAGQPGQAIRLLLD 172
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEV-KRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M L + L+L +++ N +V +F + G+ P T+ V+K+ C
Sbjct: 173 MRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLS-KGVSPTVFTFGIVMKALCMF 231
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
+ S S+L +M + PN+ + L+ ++++ + K+L+ M G V +
Sbjct: 232 NEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTF 291
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA---- 311
N I LCK+ + +A L+D ML RG P+ TY L+HG + G L A+K+
Sbjct: 292 NDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC 351
Query: 312 ----------------------------SMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
+M N G +PD + + + + LC+ G A
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARD 411
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ +G P+ T LV GL + EA ++ M R
Sbjct: 412 LVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 125/316 (39%), Gaps = 11/316 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFH--VHSIVLYGQANMIDHAM 131
+ + + + LSQ N + +LLEE+ + + F+ +H + + N I A
Sbjct: 252 NSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLC---KVNKIHDAT 308
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ + M G LL G E ++I + P PN+ N +I
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC-----PNNAILNTLING 363
Query: 192 FCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ SG S L E M +P+ + +L+ G KE ++ M + G
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I + LCK EEA +L M +RG+ N Y LI ++ + A L
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+ M GC+PD + + Y LC+ + A ++ + G V + T +L+ L
Sbjct: 484 SEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRR 543
Query: 371 SKVAEANELIGLMKKR 386
+A L+ M R
Sbjct: 544 GAFQKALTLVNDMLFR 559
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 2/292 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++I V+ L +A +L E+ R L N + I + + A+
Sbjct: 426 ITYAILVNGLCKAGLLEEAGLVLHEMSAR-GLTINSVIYNCLICALCRKEKVHVALNLLS 484
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM G + + N+L+ G +E R+F + G N+ TYN +I +
Sbjct: 485 EMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM-LLDGAVANNVTYNTLIHALLRR 543
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G +++ +M + + + L+ F K E ++ + M G+ +
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
NI I LCK+ + + A L ++RG P++ TY +++G K G ++ A LF +
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
G PD++ + F + C+ G A + G+VP T LV L
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTL 715
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 12/265 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMI 127
++ + ++ + L + + LL E+ T+ PDL F +S++ YG + + I
Sbjct: 458 INSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDL-----FTYNSLI-YGLCKVDRI 511
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A + F M G + N L+ + +++ + + G + TYN
Sbjct: 512 DEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDM-LFRGCTLDKITYNG 570
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+IK+FC+ G+ + +M + + +++ G K K ++ + L+ G
Sbjct: 571 LIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRG 630
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ YN + LCK+ R +EA L D + G++P+ TY I KEG + A
Sbjct: 631 FVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDAC 690
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFL 332
F G P + + + Y L
Sbjct: 691 LFFYRGIENGFVPSNLTWNVLVYTL 715
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F + K+GLR SV + N L+ G I + +E R+ T G++P+ TY+ +I
Sbjct: 155 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAM-HASGVQPDVYTYSVLI 213
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ + EM K + PN F L+ G K + + ++ + M ++
Sbjct: 214 NGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLS 273
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I LC+ ++A+ L+D M +G+KP+ TY LI G KEG+LE A +
Sbjct: 274 PDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEH 333
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + D + LCQ G Y A KV R ++ G P T ++
Sbjct: 334 RKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCK 393
Query: 370 ISKVAEANELIGLMKK 385
V ++L+ M++
Sbjct: 394 KGDVWTGSKLLKEMQR 409
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N ++ FC+ GD S+ + + +RP+ F L+ G+ + ++ ++ M
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ V Y++ I LCK + ++A L D ML +G+ PN T+ LI G K G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +++ M + PD + Y LC+ G+ + A + KG P T +L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLI 318
Query: 365 TG 366
G
Sbjct: 319 DG 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ F K+ V + K G+ V +N + +L +E L M
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G++P++ TY LI+G KE ++ A +LF M + G P+ F C+ G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
A+++ + +++ P T +L+ GL + +A +LI M
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEM 302
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 114/236 (48%), Gaps = 5/236 (2%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
S + L LLL ++ + KR+ +E G++P+ +TY+ ++ + GD+ + ++
Sbjct: 203 SYNGLIHLLLPGFCNEALKVYKRMISE-----GMKPSMKTYSALMVALGRRGDTRKIMNL 257
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L EM+ +RPN + + + + + +D + + M+ G V Y + I +LC
Sbjct: 258 LEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA 317
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+ ++AK L M + P+ TY L+ FGK G+LE K+ + M G PD
Sbjct: 318 AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVT 377
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+ + LC+ G+ + A + KG P+ T +++ GL ++ EA EL+
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELL 433
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
M EEM GLR ++ + ++ ++ IF E G P+ TY +I
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDD-EGCGPDVITYTVLID 313
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C +G + +MR S P+ + L+ F K E V + ME G A
Sbjct: 314 ALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAP 373
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V Y I I++LCK + A +LD M ++GI PNL TY +I G K L+ A +L
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELL 433
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
+M + G +P ++ + +F + + G+ A+ +G +P + + + LA
Sbjct: 434 ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAET 493
Query: 371 SKVAEANELIGLMKK 385
+++EA ++ + K
Sbjct: 494 GRISEAEDIFNDLHK 508
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 2/258 (0%)
Query: 130 AMQTFEEMDK-YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A F++ K G+ ++++ N L+ G + S E+ +F + K G PN+ TYN +
Sbjct: 779 AQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDM-KSAGTHPNNFTYNLL 837
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + +S + +Y + +EMR + PNA ++++ K + + +
Sbjct: 838 LDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDF 897
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ Y I L K RSE+A + + ML G PN Y LI+GFGK G ++ A +
Sbjct: 898 SPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACE 957
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M G PD + + LC G + A++ G P + ++ GL
Sbjct: 958 LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017
Query: 369 SISKVAEANELIGLMKKR 386
++ EA L MK R
Sbjct: 1018 KSRRLDEALSLFSEMKNR 1035
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 135/343 (39%), Gaps = 37/343 (10%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S + L + I LLEE+K+ LR N + I G+A ID A F+E
Sbjct: 237 TYSALMVALGRRGDTRKIMNLLEEMKS-IGLRPNIYTYTICIRALGRARRIDDAWGIFKE 295
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
MD G V L+ + ++ K ++ + + P+ TY ++ F + G
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM-RASSHSPDRVTYITLMDKFGKVG 354
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D +V EM P+ + +L+ K + +L +M GI ++ YN
Sbjct: 355 DLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYN 414
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN-------------- 302
I L K +R +EA LL+ M S G+KP +Y I +GK G+
Sbjct: 415 TMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKR 474
Query: 303 ---------------------LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
+ A+ +F + G PDS + M + G+ + A
Sbjct: 475 GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKA 534
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
++ ++KG P + SL+ L +V A ++ G +K
Sbjct: 535 TQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK 577
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 16/319 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYG--QANMID 128
D + ++I + L ++ + +L+ + T+ P+L H ++ ++ G +A +D
Sbjct: 374 DVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL------HTYNTMICGLLKARRLD 427
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT-EFPKVYGIEPNSETYNK 187
A++ E M+ G++ + A + +L K+ + K I T E K GI P+ N
Sbjct: 428 EALELLENMESLGVKPT--AFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNA 485
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+ + E+G S I ++ + + P++ + +L+ + K + + ++L M G
Sbjct: 486 SLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG 545
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V + N I +L K R + A + + + + P + TY L+ G GKEG + A
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKAL 605
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKGWVPHFSTMKSLVTG 366
+LF SMT GC P++ F L + + ALK+ CR +M P T +++ G
Sbjct: 606 ELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN-CNPDVLTYNTIIYG 664
Query: 367 LASISKVAEANELIGLMKK 385
L ++ A MKK
Sbjct: 665 LIREGRIDYAFWFFHQMKK 683
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 1/246 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G++ I+ + EM G + N ++ + S N + ++ E P
Sbjct: 841 HGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSG-DFSP 899
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
TY +I ++G S I EM PN+ + +L+ GF K + + ++
Sbjct: 900 TPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELF 959
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M K GI + Y I ++ LC R +EA + + G+ P+ +Y +I+G GK
Sbjct: 960 KKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKS 1019
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L+ A LF+ M N G PD Y + L G+ + A+K+ G P T
Sbjct: 1020 RRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTY 1079
Query: 361 KSLVTG 366
+L+ G
Sbjct: 1080 NALIRG 1085
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 2/247 (0%)
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMD 138
+I +S L ++N+ N L EL + D + I +A + AM+ FEEM
Sbjct: 870 NIIISALVKSNNLNKALDLYYELMS-GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML 928
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
YG + N L+ G S + +F + K GI P+ ++Y +++ C +G
Sbjct: 929 DYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVK-EGIRPDLKSYTILVECLCITGRI 987
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
E++ + P+ + ++ G K + ++ + M+ GI+ + YN
Sbjct: 988 DEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNAL 1047
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I L + + A + + + G++P++ TY LI G GN + A +F M GC
Sbjct: 1048 ILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107
Query: 319 EPDSYCF 325
P++ F
Sbjct: 1108 SPNTETF 1114
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G++ ID A + F++M K G+R + + L+ ++ +E + F E K+ G++P
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL-KLTGLDP 1004
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ +YN +I +S S+ +EM+ + I P+ + L+ K + K+
Sbjct: 1005 DTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMY 1064
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ++ G+ V YN I+ ++A ++ M+ G PN +T+ L + + +
Sbjct: 1065 EELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRA 1124
Query: 301 G 301
G
Sbjct: 1125 G 1125
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 139/340 (40%), Gaps = 47/340 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---------------------RP------- 105
D+ +F VS+L AN F A ++ +K RP
Sbjct: 50 DQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 106 ------DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
D +++ +V + + + N ++ A + ++ M + GL +V +LN L+ L
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA--LC 167
Query: 160 KNYEEVK---RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+N V +IF E PK G +P+S TY +I C G + EM K P
Sbjct: 168 RNDGTVDAGLKIFHEMPK-RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ L+ G ++ + ++ M+ GI V Y+ + LCK RS +A L +
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M++RG +PN+ TY LI G KE ++ A +L M G +PD+ + C
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAVS 346
Query: 337 EYETALKVCRASMAKG-------WVPHFSTMKSLVTGLAS 369
++ A + G W H T +V GL +
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCT 386
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 11/260 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A + F EM + +V +L+ G SKN +E R + E K GIEPN TY+
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR-YVEEMKGKGIEPNVFTYS 266
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+ G S + M + RPN + L+ G KE K ++ ++L M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG- 305
G+ +Y I C + + EA LD M+ GI PN T+ IH + G
Sbjct: 327 GLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWN--IHVKTSNEVVRGL 384
Query: 306 -------AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
A L+ SM + G + LC+ GE++ A+++ + G +P+
Sbjct: 385 CTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKG 444
Query: 359 TMKSLVTGLASISKVAEANE 378
T K L+ + V EA++
Sbjct: 445 TWKLLIGHTLDNTIVGEASD 464
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 8/203 (3%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +V + F DS V+ +M+ P+ + +LA +E++ K + M
Sbjct: 96 YGRVHRPF----DSLRVFH---KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR 148
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAK-ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
+ G+ V N+ I++LC+ + +A + M RG P+ TY LI G + G +
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRI 208
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ AKKLF M C P + LC + A++ KG P+ T SL
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSL 268
Query: 364 VTGLASISKVAEANELIGLMKKR 386
+ GL + +A EL +M R
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMAR 291
>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
Length = 626
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 1/203 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A MI +TF ++ + G SV A N LL G + S + ++ E +V G+ P
Sbjct: 192 YVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRV-GVIP 250
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
NS T+N + FC+ GD + L +M + P+ + L+ G+ + D +
Sbjct: 251 NSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLY 310
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++M + + + Y + LCK R EA LL M+ RG+ P++ +Y LI G+ KE
Sbjct: 311 RIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKE 370
Query: 301 GNLEGAKKLFASMTNGGCEPDSY 323
G + +K L M G PDS+
Sbjct: 371 GKMLESKSLLYEMIGNGIFPDSF 393
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ +YN +I +C+ G S+L EM I P++ +L+ G+ KE
Sbjct: 352 GLNPDVVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISA 411
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ +EK G++ ++Y+ + SLC+ R AK LL+ M RG P+++ Y LI
Sbjct: 412 LNLVVELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIES 471
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K + A L A + G P+ + LC+ G A K+ + G P
Sbjct: 472 LCKGDCVADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPD 531
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRF 387
++++ G +A L+ L K F
Sbjct: 532 PEICRAMIHGYCREKDAGKAESLLVLFAKEF 562
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 1/200 (0%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R F + +V G P+ N ++ +S + + EM R + PN+ F +L
Sbjct: 203 RTFMQILEV-GYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIPNSYTFNILTHL 261
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
F K+ + + L+ ME+ G + YN I C R +A L M R + P+
Sbjct: 262 FCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPD 321
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
L +Y L++G KEG + A +L M + G PD + C+ G+ + +
Sbjct: 322 LVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLY 381
Query: 347 ASMAKGWVPHFSTMKSLVTG 366
+ G P T + L+ G
Sbjct: 382 EMIGNGIFPDSFTCRVLIQG 401
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 2/208 (0%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
++ ++K++ ++G + ++ P+ LL G K + V M
Sbjct: 185 FDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMG 244
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G+ +NI CK ++ L+ M G +P++ TY LI+G+ G L
Sbjct: 245 RVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLS 304
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A L+ M PD + LC+ G A ++ + +G P + +L+
Sbjct: 305 DAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLI 364
Query: 365 TGLASISKVAEANELIGLMKKR--FPKS 390
G K+ E+ L+ M FP S
Sbjct: 365 CGYCKEGKMLESKSLLYEMIGNGIFPDS 392
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 60/133 (45%)
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
++++ +++ K +E +L G P++ +L++G K ++ ++ M
Sbjct: 184 IFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEM 243
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P+SY F + T+ C+ G+ + +G+ P T +L+ G ++
Sbjct: 244 GRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRL 303
Query: 374 AEANELIGLMKKR 386
++A L +M +R
Sbjct: 304 SDAFYLYRIMYRR 316
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 54/133 (40%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
V I PN TY +I+ C G S ++ EM ++P+ ++ G+ +E
Sbjct: 490 VGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAG 549
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+L + K Y+ ++ +C+ + L + ML G PN T K++I
Sbjct: 550 KAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCKYMI 609
Query: 295 HGFGKEGNLEGAK 307
G K L K
Sbjct: 610 DGLRKNVGLVKEK 622
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 3/267 (1%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
LY + + A+ +EM+ G++ + + L+ G I ++ IF E + G++
Sbjct: 426 LYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRS-GLQ 484
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ YN +I++FC+ G+ IL +M+++ ++P+ F ++ G+ +
Sbjct: 485 PDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT 544
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L +M + G V YN I L + + + A ++LD M GI PN TY ++ G+
Sbjct: 545 LDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAA 604
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G++ A + F + G + D Y + C+ G ++AL V R M+ +P +
Sbjct: 605 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTR-EMSFQKIPRNTF 663
Query: 360 MKS-LVTGLASISKVAEANELIGLMKK 385
+ + L+ G A V EA +L+ MK+
Sbjct: 664 IYNILIDGWARRGDVWEAEDLMKQMKE 690
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 141/310 (45%), Gaps = 2/310 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +SI +S ++ N + L +E KT+ N + + I + Q+ ++ A +
Sbjct: 313 VTYSILISGFAKINDSQSADNLFKEAKTKLS-SLNGIIYSNIIHAHCQSGNMERAEELVR 371
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM++ G+ +D ++++ G + +N + +F K G +P+ +Y ++ + +
Sbjct: 372 EMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL-KECGFKPSIISYGCLLNLYVKI 430
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G + SI EM I+ N + +L+ GF H + + + + M + G+ +Y
Sbjct: 431 GKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIY 490
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N+ I++ CK+ + A +L+ M ++P+ ++ +I G+ G+++ A M
Sbjct: 491 NLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRR 550
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC P + + L + + + A+ V G P+ T ++ G A+ + +
Sbjct: 551 SGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGK 610
Query: 376 ANELIGLMKK 385
A E +K+
Sbjct: 611 AFEYFTKIKE 620
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 139/331 (41%), Gaps = 6/331 (1%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNER 112
+N F I + + L P DR +++ + + + + +LE+++ + ++ + R
Sbjct: 469 ANAFAIFEEMLRSGLQP----DRAIYNLLIEAFCKMGNMDRAICILEKMQ-KERMQPSNR 523
Query: 113 FHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
I Y A + A+ T + M + G +V NAL+ G + + + +
Sbjct: 524 AFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM 583
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ GI PN TY +++ + SGD + +++ ++ + + LL K +
Sbjct: 584 -SIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 642
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ V + M I +YNI I + EA+ L+ M G+ PN+ TY
Sbjct: 643 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTS 702
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
I+ K G+++ A+K+ M + G +P+ + + + ALK G
Sbjct: 703 YINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 762
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
P ++ LVT L S + V E + G++
Sbjct: 763 LKPDEASYHCLVTSLLSRATVMEGSTYTGII 793
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 125/297 (42%), Gaps = 8/297 (2%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
+S+ ++ + F + EE+ R L+ + + I + + +D A+ E+M
Sbjct: 455 YSMLINGFIHLHDFANAFAIFEEM-LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKM 513
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K ++ S A ++ G ++ + + + + G P TYN +I
Sbjct: 514 QKERMQPSNRAFRPIIEGYAVAGDMKSALDTL-DLMRRSGCVPTVMTYNALIHGLVRKHK 572
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---GIASGVNV 254
S+L +M I PN + +++ G+ D+GK + K G+ V +
Sbjct: 573 VQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASG---DIGKAFEYFTKIKESGLKLDVYI 629
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y +++ CK R + A A+ M + I N Y LI G+ + G++ A+ L M
Sbjct: 630 YETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMK 689
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G P+ + + + C+ G+ + A KV + G P+ T +L+ G A +S
Sbjct: 690 EDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVS 746
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 113/303 (37%), Gaps = 36/303 (11%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
IV Y + HA TFE M G+ + +L+ ++++ E K G
Sbjct: 249 IVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM-KSEG 307
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+E TY+ +I F + DS S ++ E + K N + ++ + E
Sbjct: 308 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAE 367
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL---------- 287
++++ ME+ GI + ++VY+ + ++ + + + + G KP++
Sbjct: 368 ELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLY 427
Query: 288 -------------------------DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
TY LI+GF + A +F M G +PD
Sbjct: 428 VKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDR 487
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+ G + A+ + + P + ++ G A + A + + L
Sbjct: 488 AIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDL 547
Query: 383 MKK 385
M++
Sbjct: 548 MRR 550
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 9/218 (4%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
N++ V F PK P+ + +I + + GD + MR + I PNA F
Sbjct: 226 NWQAVVSAFERIPK-----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVF 280
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ + ++ M+ G+ + Y+I I K+ S+ A L +
Sbjct: 281 TSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKT 340
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP--DSYCFFMFTYFLCQGGEY 338
+ N Y ++IH + GN+E A++L M G + D Y M Y + Q
Sbjct: 341 KLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQN--E 398
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
L V G+ P + L+ I KVA+A
Sbjct: 399 NKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKA 436
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 133/335 (39%), Gaps = 37/335 (11%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F + L + F + L+E ++ R L + F + + Y +A + A++TFE+
Sbjct: 167 GFHNLIEALGKIKQFKLVWSLVETMRCR-GLLSKDTFKL-IVRRYARARKVKEAVETFEK 224
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP---------KVY----------- 176
M +GL+ + N L+ SK ++ + I+ E K Y
Sbjct: 225 MSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLMEGWGHEK 284
Query: 177 ---------------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
GI P+ Y +I +FC+SG + EM P+ +
Sbjct: 285 DLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYC 344
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ G E + ++ K + +K G V N + + C+ + E A ++D M
Sbjct: 345 MLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDEMREC 404
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
I PN TY ++H K E A +F M GCEP + M C G + A
Sbjct: 405 KIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMA 464
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
L V + +G +P +L+ GL +++ EA
Sbjct: 465 LNVWKQMGERGVLPCMHMFSALINGLCFENRLEEA 499
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 1/224 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + ++ D A++ F EM+ G S L+ G + +E + F ++ K G
Sbjct: 312 ISAFCKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKS-G 370
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
T N V+ ++C + + ++ EMR I PN+ + ++L K K+E+
Sbjct: 371 FPMEVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAY 430
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V Q M G +N Y + + C R + A + M RG+ P + + LI+G
Sbjct: 431 NVFQRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGL 490
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
E LE A F M + G P F L +GG A
Sbjct: 491 CFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRISLA 534
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 3/224 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +E ++ +I++ + V+S++ MR + + T F L++ + + K ++
Sbjct: 160 GFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGLLSKDT-FKLIVRRYARARKVKEA 218
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIH 295
+ + M G+ + ++ YN I +L K K+ ++A+A+ M +G P+L TY L+
Sbjct: 219 VETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVPDLKTYTVLME 278
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G+G E +L K ++ M + G PD + M C+ G+ + A+KV A G +P
Sbjct: 279 GWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMP 338
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
L+ GL S ++ EA + KK FP NA +
Sbjct: 339 SPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVV 382
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 8/196 (4%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
HV+ +++ G +D A++ FE+ K G V NA++ + +E ++ E
Sbjct: 341 HVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDE 400
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ I PNS TY+ ++ +S Y++ M P + +++ F
Sbjct: 401 MREC-KIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNG 459
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + V + M + G+ +++++ I LC R EEA ML +GI+P +
Sbjct: 460 RVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFS 519
Query: 292 HLIHGFGKEGNLEGAK 307
+L KE +EG +
Sbjct: 520 NL-----KEALVEGGR 530
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 143 RQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
R SVD + N +L G L K + + E + GI PN TYN ++K F +G
Sbjct: 190 RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVE-RGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ EM+++ + + ++ GF + + V M + G+ V YN IQ
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK E A + + M+ RG +PN+ TY LI G G ++L M N GCEP
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ + M + + E E AL + + +P+ T L++G+
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 12/325 (3%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
GA+L P P D A IA LS N + Q L KT P ++ + VL
Sbjct: 15 GANLKP-PPADSAA--IAKLILSSPNTTHQDDQFLLSTKTTPWTP-----NLVNSVLKRL 66
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPN 181
N A+Q F +D + R+ V ++ L ++ +++ ++ I P+
Sbjct: 67 WNHGPKALQFFHFLDNHH-REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 125
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+T+ V + + +G + M + F +L K + E ++ +
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+ + + YN+ + C +KR+ +A +L M+ RGI PNL TY ++ GF + G
Sbjct: 186 AL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A + F M CE D + + GE + A V + +G +P +T
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
+++ L V A + M +R
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRR 329
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G A I A F+EM + G+ SV NA++ N E +F E + G EP
Sbjct: 275 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEP 333
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +I+ +G+ S ++ M + PN + +++ +Y E +V K L
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR-YYSE--CSEVEKAL 390
Query: 241 QMMEKCGIAS---GVNVYNIRIQSLCKLKRSEE 270
+ EK G ++ YNI I + KRSE+
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCI----LSKNYEEVKRIFTEFPKVYGIEPNS 182
+++A+ FEEM + G +V N L+ G S+ E ++R+ E G EPN
Sbjct: 316 VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE-----GCEPNF 370
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
+TYN +I+ + E + + +M PN + +L++G + + ED+
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDM 424
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 148/327 (45%), Gaps = 2/327 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +S + L + +A L +E++T+ ++ + + + +A + +Q
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKG-IKSSLVTYNSLVGGLCKAGKWNDGVQL 262
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++M + +V N L+ + +E ++ E GI PN+ TYN ++ +C
Sbjct: 263 LKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI-TKGISPNTITYNSLMDGYC 321
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
S ++L M R + P+ F L+ G+ K + ++ K+ + + K G+ +
Sbjct: 322 MQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTV 381
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I +Q C+ + E A+ L M+S G+ P++ TY L+ G G LE A ++F +
Sbjct: 382 TYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 441
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
D + + +C+GG+ E A + + KG P+ T +++GL +
Sbjct: 442 QKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 501
Query: 374 AEANELIGLMKKRFPKSGDMWNAALPR 400
+EAN L+ M++ + D L R
Sbjct: 502 SEANILLRKMEEDGNEPNDCTYNTLIR 528
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 3/249 (1%)
Query: 139 KYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
K G N L+ G C+ SK E V + G +PN TYN ++ C+SGD
Sbjct: 128 KLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN--GCQPNVVTYNSIVNGICKSGD 185
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+S +L +M ++++ + + ++ ++ + + + ME GI S + YN
Sbjct: 186 TSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNS 245
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
+ LCK + + LL M SR I PN+ T+ LI F KEG L+ A +L+ M G
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P++ + C A + + P T SL+ G + +V E
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 378 ELIGLMKKR 386
+L + KR
Sbjct: 366 KLFRKISKR 374
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 147/328 (44%), Gaps = 35/328 (10%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ ++ V L +A +N QLL+++ +R + F+V I ++ + + A + ++
Sbjct: 241 VTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVL-IDVFVKEGKLQEANELYK 299
Query: 136 EMDKYGLRQSVDALNALLLG-CI----------------------------LSKNYEEVK 166
EM G+ + N+L+ G C+ L K Y +VK
Sbjct: 300 EMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVK 359
Query: 167 RI---FTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
R+ F K+ G+ N+ TY+ +++ FC+SG + EM + P+ +G
Sbjct: 360 RVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYG 419
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+LL G K E ++ + ++K + + +Y I I+ +CK + E+A L + +
Sbjct: 420 ILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCK 479
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G+KPN+ TY +I G K+G+L A L M G EP+ + + G+ +
Sbjct: 480 GVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTAS 539
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLAS 369
K+ + G+ S++K ++ L+S
Sbjct: 540 AKLIEEMKSCGFSADASSIKMVIDMLSS 567
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 1/252 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ F+EM + S+ + G +K + V F + ++ GI N T N
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLD-FCKKMELNGIAHNIYTLNI 105
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC + YS+L ++ + P+ T F L+ G E K + ++ M + G
Sbjct: 106 MINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENG 165
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
V YN + +CK + A LL M R +K ++ TY +I ++G ++ A
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
LF M G + + LC+ G++ +++ + ++ +P+ T L+
Sbjct: 226 SLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVF 285
Query: 368 ASISKVAEANEL 379
K+ EANEL
Sbjct: 286 VKEGKLQEANEL 297
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%)
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
+ GI Y + ++S + EM R P+ DF +G ++
Sbjct: 23 ISGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFN 82
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
V + ME GIA + NI I C+ ++ A ++L ++ G +P+ T+ LI
Sbjct: 83 LVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 142
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+G E + A L A M GC+P+ + +C+ G+ AL + R +
Sbjct: 143 NGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVK 202
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
T +++ L + A L M+ + KS
Sbjct: 203 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 143 RQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
R SVD + N +L G L K + + E + GI PN TYN ++K F +G
Sbjct: 190 RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVE-RGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQ 260
+ EM+++ + + ++ GF + + V M + G+ V YN IQ
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQ 308
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK E A + + M+ RG +PN+ TY LI G G ++L M N GCEP
Sbjct: 309 VLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEP 368
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ + M + + E E AL + + +P+ T L++G+
Sbjct: 369 NFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 10/203 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+G A I A F+EM + G+ SV NA++ N E +F E + G EP
Sbjct: 275 FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR-RGYEP 333
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TYN +I+ +G+ S ++ M + PN + +++ +Y E +V K L
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR-YYSE--CSEVEKAL 390
Query: 241 QMMEKCGIAS---GVNVYNIRIQSLCKLKRSEE---AKALLDGMLSRGIKPNLDTYKHLI 294
+ EK G ++ YNI I + KRSE+ A LL M+ RG P T+ ++
Sbjct: 391 GLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVL 450
Query: 295 HGFGKEGNLEGAKKLFASMTNGG 317
+G GN AK++ + G
Sbjct: 451 NGLLLTGNQAFAKEILRLQSKSG 473
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 132/325 (40%), Gaps = 12/325 (3%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
GA+L P P D A IA LS N + Q L KT P ++ + VL
Sbjct: 15 GANLKP-PPADSAA--IAKLILSSPNTTHQDDQFLLSTKTTPWTP-----NLVNSVLKRL 66
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPN 181
N A+Q F +D + R+ V ++ L ++ +++ ++ I P+
Sbjct: 67 WNHGPKALQFFHFLDNHH-REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPS 125
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+T+ V + + +G + M + F +L K + E ++ +
Sbjct: 126 PKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR 185
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+ + + YN+ + C +KR+ +A +L M+ RGI PNL TY ++ GF + G
Sbjct: 186 AL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAG 244
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A + F M CE D + + GE + A V + +G +P +T
Sbjct: 245 QIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYN 304
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
+++ L V A + M +R
Sbjct: 305 AMIQVLCKKDNVENAVVMFEEMVRR 329
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q N A+ + MD +G +V N ++ G +++ +F K GI
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK-KGIRA 217
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I SG + +L +M ++ I PN F L+ F KE + +
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + + V YN I C +AK + D M+S+G P++ TY LI GF K
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+E KLF MT G D++ + + CQ G+ A KV + G P T
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
L+ L + K+ +A ++ ++K
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQK 422
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 1/248 (0%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M K G R S+ L +LL G ++E + +G PN YN VI C++
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG-FGFVPNVVIYNTVINGLCKN 197
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
D ++ + M +K IR +A + L++G ++ D ++L+ M K I V +
Sbjct: 198 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 257
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + K EA+ L M+ R + PN+ TY LI+GF G L AK +F M +
Sbjct: 258 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 317
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC PD + C+ E +K+ +G V T +L+ G K+
Sbjct: 318 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 377
Query: 376 ANELIGLM 383
A ++ M
Sbjct: 378 AQKVFNRM 385
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ +S LS + + ++LL ++ R + N F I + + + A
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNL 276
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++EM + + +V N+L+ G + + K +F + G P+ TYN +I FC
Sbjct: 277 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFC 335
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S + EM + + +A + L+ G+ + K KV M CG++ +
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + LC + E+A +++ + + ++ TY +I G + L+ A LF S+
Sbjct: 396 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
T G +PD+ + LC+ G A K+CR G++P
Sbjct: 456 TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+S+ EM + P+ DF +L K +K++ V + ME GI+ + + I I
Sbjct: 64 FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHC 123
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
C+ R A ALL M+ G +P++ T L++GF + + A L SM G P+
Sbjct: 124 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN 183
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ LC+ + AL+V KG T +L++GL++ + +A L+
Sbjct: 184 VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR 243
Query: 382 LMKKR 386
M KR
Sbjct: 244 DMVKR 248
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA ++ A + F M G+ + N +LL C+ + E + E + ++
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYN-ILLDCLCNNGKIEKALVMVEDLQKSEMDV 427
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I+ C + + + + RK ++P+A + +++G ++ + K+
Sbjct: 428 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 487
Query: 241 QMMEKCGIASGVNVYN 256
+ M++ G +Y+
Sbjct: 488 RRMKEDGFMPSERIYD 503
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 121/271 (44%), Gaps = 3/271 (1%)
Query: 115 VHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+ +IVL G + + AM EM + + + + N L+ G +K +E + E
Sbjct: 146 IMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM 205
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
+ G PNS T ++ C+ G +L M++K + +G L++GF
Sbjct: 206 -EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGN 264
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ ++ M GI++ V Y+ + LC+L + +EA +L+ M GI P++ TY
Sbjct: 265 LDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTG 324
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
LI G K+G A L M G EP + + + LC+ G A K+ R + KG
Sbjct: 325 LIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLM 383
T +L+ GL KV EA +L M
Sbjct: 385 KKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 5/297 (1%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+ K +A H + L+ E P N ++V L + +ID A + M +
Sbjct: 328 GLCKDGRATHAMDLLNLMVEKGEEP---SNVTYNVLLSGLCKEGLVID-AFKILRMMIEK 383
Query: 141 GLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G + V N L+ G C K E +K + F +EPN T+N +I C+ G +
Sbjct: 384 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 443
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
I +M +K N + +LL G K K ++ ++ + + G Y+I I
Sbjct: 444 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 503
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CK++ AK L M + G+ P L Y L+ KEG+LE AK LF M N CE
Sbjct: 504 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 563
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
PD F + G+++ ++ + G P T +L+ L+ + ++ EA
Sbjct: 564 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G N N V+K C +G ++ EM RKS+ P+ + L+ G K K ++
Sbjct: 139 GFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEA 198
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+L ME G + LCK R +EA LL+ M +G ++ Y LI G
Sbjct: 199 VGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISG 258
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F GNL+ K+LF M G + + + LC+ G+++ A V A G P
Sbjct: 259 FCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPD 318
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T L+ GL + A +L+ LM ++
Sbjct: 319 VVTYTGLIDGLCKDGRATHAMDLLNLMVEK 348
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 10/277 (3%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+VLYG +D + F+EM G+ +V + L+ G ++E +
Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ +GI P+ TY +I C+ G ++ +L M K P+ + +LL+G K
Sbjct: 308 NAMAE-HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 366
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR--GIKPNL 287
E D K+L+MM + G + V YN ++ LC + +EA L + M ++PN+
Sbjct: 367 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNV 426
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ LI G KEG L A K+ M G + + M + G+ + A+++ +
Sbjct: 427 FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQ 486
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ G+VP+ T L+ G + + A L M+
Sbjct: 487 VLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMR 523
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 1/252 (0%)
Query: 139 KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
K G +V +N +L G + E + E + + P+ +YN +I C++
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR-KSVSPDIVSYNTLINGLCKAKKL 195
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+L EM PN+ L+ G K+ + ++ ++L+ M+K G + V +Y
Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I C + K L D ML +GI N+ TY L+HG + G + A + +M G
Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANE 378
PD + LC+ G A+ + + KG P T L++GL V +A +
Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFK 375
Query: 379 LIGLMKKRFPKS 390
++ +M ++ K+
Sbjct: 376 ILRMMIEKGKKA 387
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 1/251 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ +M K G ++ N LL GC+ + +E ++ + + G PNS TY+ +I
Sbjct: 445 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL-GFVPNSFTYSILI 503
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ + + EMR + P D+ L+A KE E + Q M
Sbjct: 504 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 563
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +N I K + K L M+ G++P+ T+ LI+ K G L+ AK
Sbjct: 564 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 623
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G PD+ + L G+ + + AKG V + +++T L
Sbjct: 624 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 683
Query: 370 ISKVAEANELI 380
+ + EL+
Sbjct: 684 SIQEVDVMELL 694
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 108/255 (42%), Gaps = 3/255 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F + L S N L+ S+NY ++ V + P+ + + +I
Sbjct: 58 AVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV-DVLPSFGSLSALI 116
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK-YEDVGKVLQMMEKCGI 248
+ F ++ + ++ + ++ N ++L G + +E +G + +M K +
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRK-SV 175
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + YN I LCK K+ +EA LL M + G PN T L+ G K+G ++ A +
Sbjct: 176 SPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAME 235
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L +M G + D + C G + ++ + KG + T LV GL
Sbjct: 236 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 295
Query: 369 SISKVAEANELIGLM 383
+ + EAN ++ M
Sbjct: 296 RLGQWKEANTVLNAM 310
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 35/211 (16%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+ + P+ T N ++ + S + +S+ M + P+ L+ F K +
Sbjct: 68 FNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQL 127
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V+ ++ K G V + NI ++ LC+ EA L+ M + + P++ +Y LI+
Sbjct: 128 GFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLIN 187
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G K L+ A L M GC P+S
Sbjct: 188 GLCKAKKLKEAVGLLLEMEAAGCFPNSV-------------------------------- 215
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ GL ++ EA EL+ MKK+
Sbjct: 216 ---TCTTLMDGLCKDGRMDEAMELLEAMKKK 243
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 138/340 (40%), Gaps = 47/340 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---------------------RP------- 105
D+ +F V +L AN F A L+ +K RP
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109
Query: 106 ------DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
D +++ +V + + + N ++ A + ++ M + GL +V +LN L+ L
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA--LC 167
Query: 160 KNYEEVK---RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+N V +IF E PK G +P+S TY +I C G + EM K P
Sbjct: 168 RNDGTVDAGLKIFLEMPK-RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ L+ G ++ + L+ M+ GI V Y+ + LCK RS +A L +
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M++RG +PN+ TY LI G KE ++ A +L M G +PD+ + C
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 337 EYETALKVCRASMAKG-------WVPHFSTMKSLVTGLAS 369
++ A + G W H T +V GL +
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCA 386
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 11/262 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A + F EM + +V +L+ G SKN +E R E K GIEPN TY+
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEM-KSKGIEPNVFTYS 266
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+ G S + M + RPN + L+ G KE K ++ ++L M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG- 305
G+ +Y I C + + EA LD M+ GI PN T+ IH + G
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN--IHVKTSNEVVRGL 384
Query: 306 -------AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
A L+ SM + G + LC+ GE++ A+++ + G +P
Sbjct: 385 CANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG 444
Query: 359 TMKSLVTGLASISKVAEANELI 380
T K L+ + V EA++ +
Sbjct: 445 TWKLLIGHTLDKTIVGEASDTL 466
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 10/204 (4%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y +V + F DS V+ +M+ P+ + +LA +E++ K + M
Sbjct: 96 YGRVHRPF----DSLRVFH---KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR 148
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEA--KALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
+ G+ V N+ I++LC+ + +A K L+ M RG P+ TY LI G + G
Sbjct: 149 EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLE-MPKRGCDPDSYTYGTLISGLCRFGR 207
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ AKKLF M C P + LC + A++ +KG P+ T S
Sbjct: 208 IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSS 267
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
L+ GL + +A EL +M R
Sbjct: 268 LMDGLCKDGRSLQAMELFEMMMAR 291
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 125/289 (43%), Gaps = 37/289 (12%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F+EM + ++ +V N L+ G +++ + V ++ E V G++P+ TY +I
Sbjct: 205 ARKVFDEM-RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDV-GVKPDVYTYGALI 262
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
K FC +G + + EMR + PNA F L+ KE + Q M G+
Sbjct: 263 KGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE----- 304
+ YN + LC+ + + A+++++ M + G+KP+ TY LI G K+G L+
Sbjct: 323 PDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDI 382
Query: 305 ------------------------------GAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
A+++ M EPD+ + M C+
Sbjct: 383 KQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCR 442
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G+ +T K+ + KG P T ++ GL + ++ A+ L+ M
Sbjct: 443 KGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAM 491
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 113/242 (46%), Gaps = 4/242 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ M +++M G+ + A NAL+ G ++N + + I E K G++P+ TY
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM-KNAGLKPDKVTYT 364
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G I +M K + + + L++G K + D +VL+ M +
Sbjct: 365 TLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEA 424
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ Y + I + C+ + LL M ++G KP + TY +++G K G ++ A
Sbjct: 425 ALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNA 484
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L +M N G PD + + C+ G+ + ++ +KG VP F+ SL++
Sbjct: 485 DMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTSLISE 541
Query: 367 LA 368
LA
Sbjct: 542 LA 543
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 137/306 (44%), Gaps = 6/306 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
+ F+ +S + +A +A+ L +E+ D+ + + ++ G + +++A++
Sbjct: 221 VTFNTLISGMCRARDLDAVDGLYKEMS---DVGVKPDVYTYGALIKGFCRTGRMENAVKM 277
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F EM G+ + L+ N ++ + +V G+ P+ YN ++ C
Sbjct: 278 FNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDM-RVRGVMPDLVAYNALVNGLC 336
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + + SI+ EM+ ++P+ + L+ G K+ K + + Q M + ++
Sbjct: 337 RARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEV 396
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I L K R +A+ +L M+ ++P+ TY +I F ++G+++ KL M
Sbjct: 397 TYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEM 456
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
N G +P + + LC+ G+ + A + A + G P T L+ G KV
Sbjct: 457 QNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKV 516
Query: 374 AEANEL 379
A + EL
Sbjct: 517 ANSEEL 522
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 95/203 (46%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I PN Y+ +I S C+ G S ++ EM+ K I P+ + ++ GF ++ D
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++LQ M + I+ V YN I + K + EA+ L D ML RGI PN TY +I GF
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K+ L+ A+ +F M GC P+ F C + +++ G V
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 358 STMKSLVTGLASISKVAEANELI 380
+T +L+ G + + A +L+
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLL 453
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
+ + + +FTE + GI P+ TYN +I FC SG S +L EM + I P+ +
Sbjct: 271 HSDAQNLFTEMQE-KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYN 329
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
L+ F KE K+ + ++ M GI Y+ I CK R + A+ + M ++
Sbjct: 330 ALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G PNL T+ LI G+ ++ +L MT G D+ + + G+ A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + + ++ G P T +L+ GL K+ +A E+ +M+K
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQK 493
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 15/297 (5%)
Query: 104 RPDL---------RQNERFHVHSIVL----YGQANMIDHAMQTFEEMDKYGLRQSVDALN 150
RPDL R+ R ++S + + + + A+ TF ++ K GL V N
Sbjct: 94 RPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFN 153
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
LL G + E +F + + PN T+ ++ C G ++L M
Sbjct: 154 TLLHGLCVEDRVSEALNLFHQMFETT-CRPNVVTFTTLMNGLCREGRIVEAVALLDRMME 212
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSE 269
++P +G ++ G K +L+ ME+ I V +Y+ I SLCK R
Sbjct: 213 DGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHS 272
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A+ L M +GI P+L TY +I GF G A++L M PD +
Sbjct: 273 DAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALI 332
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G++ A ++ + +G +P+ T S++ G +++ A + LM +
Sbjct: 333 NAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATK 389
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 12/267 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A ID M+ EM + GL N L+ G L + + E G+ P
Sbjct: 405 YCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMIS-SGLCP 463
Query: 181 NSETYNKVIKSFCESG---DSSSVYSILAEMRRK--------SIRPNATDFGLLLAGFYK 229
+ T + ++ C++G D+ ++ ++ + ++ + P+ + +L++G
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLIN 523
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
E K+ + ++ + M GI Y+ I LCK R +EA + D M S+ PN+ T
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVT 583
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
+ LI+G+ K G ++ +LF M G ++ + + G AL + + +
Sbjct: 584 FTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P T+++++TGL S ++ A
Sbjct: 644 SSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 14/320 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + ++ ++ + F +L +E+ R + N + I + + N +D A
Sbjct: 322 SP-DVVTYNALINAFVKEGKFFEAEELYDEMLPR-GIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F M G ++ N L+ G +K ++ + E + G+ ++ TYN +I
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET-GLVADTTTYNTLIH 438
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---- 246
F GD ++ +L EM + P+ LL G K +D ++ ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 247 -------GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
G+ V YNI I L + EA+ L + M RGI P+ TY +I G K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
+ L+ A ++F SM + P+ F C+ G + L++ +G V + T
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 360 MKSLVTGLASISKVAEANEL 379
+L+ G + + A ++
Sbjct: 619 YITLICGFRKVGNINGALDI 638
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 139/360 (38%), Gaps = 58/360 (16%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVL-YGQANMIDHAMQT 133
+S + L + + L E++ + PDL F +S+++ + + A Q
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL-----FTYNSMIVGFCSSGRWSDAEQL 312
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSF 192
+EM + + V NAL+ + + E + ++ E P+ GI PN+ TY+ +I F
Sbjct: 313 LQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR--GIIPNTITYSSMIDGF 370
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + + M K PN F L+ G+ + +D ++L M + G+ +
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLS-------------------------------- 280
YN I + A LL M+S
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 281 --------------RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
G++P++ TY LI G EG A++L+ M + G PD+ +
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ + A ++ + +K + P+ T +L+ G +V + EL M +R
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%)
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+ ++M R P+ DF L+ + + + V + Q ME+ I + + I I+
Sbjct: 65 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 124
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C + A + + G+ P++ T+ L+HG E + A LF M C P+
Sbjct: 125 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 184
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
F LC+ G A+ + M G P T ++V G+ I A +L+
Sbjct: 185 VTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRK 244
Query: 383 MKK 385
M++
Sbjct: 245 MEE 247
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 15/181 (8%)
Query: 102 KTRPDLRQNERF-------HVHSIVLYGQAN--MIDHAMQTFEEMDKYGLRQSVDALNAL 152
K++ DL + F ++I++ G N A + +EEM G+ +++
Sbjct: 493 KSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 552
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+ G +E ++F PN T+ +I +C++G + EM R+
Sbjct: 553 IDGLCKQSRLDEATQMFDSMGS-KSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS-LCKLKRSEEA 271
I NA + L+ GF K + Q M I+SGV I I++ L L EE
Sbjct: 612 IVANAITYITLICGFRKVGNINGALDIFQEM----ISSGVYPDTITIRNMLTGLWSKEEL 667
Query: 272 K 272
K
Sbjct: 668 K 668
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 2/291 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+FSI + L + L ++ R +QN + + I +N ++ +E
Sbjct: 419 SFSIVIDGLCNTGKLDLALSLFRDM-VRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKE 477
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M G R + N++ GC+ + +V+G EP + Y ++K C+
Sbjct: 478 MKGSGFRPTQFTHNSIF-GCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRK 536
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+ + LAEM R+ P+ + + GF K + ++ + + G V YN
Sbjct: 537 RSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYN 596
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I CK+KR EA +LD M+++G+ P++ TY LI G+ K G+++ A + M
Sbjct: 597 TLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGK 656
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
EP+ + LC G + A+ + KG P+ + +L+ GL
Sbjct: 657 EREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGL 707
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 3/272 (1%)
Query: 117 SIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
SIV+ G N +D A+ F +M + G +Q+V N L+ S EE + E K
Sbjct: 421 SIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEM-K 479
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G P T+N + C D + ++ EMR P + LL+ K +
Sbjct: 480 GSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSA 539
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ L M + G + Y+ I K+K ++A + + +RG P++ Y LI
Sbjct: 540 EACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 599
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+GF K + A + M G P + + C+ G+ + A + K
Sbjct: 600 NGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKERE 659
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T +L+ GL + + +A L M+ +
Sbjct: 660 PNVITYTTLIDGLCNAGRPDDAIHLWNEMRGK 691
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 128/356 (35%), Gaps = 51/356 (14%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+D SI V S+ + +L+E ++ +R NE+ I + + + +D A+Q
Sbjct: 226 VDGHVLSILVLTFSKCGEVDKAFELIERMEDL-GIRLNEKTFCVLIHGFVRQSRVDKALQ 284
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET-------- 184
F++M K G V +AL+ G K E+ + +E K GI+P+ +
Sbjct: 285 LFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEM-KELGIDPDIQILSKLIPYC 343
Query: 185 -------------------------YNKVIKSFCESGDSSSVYSILAEMR---------- 209
YN V+ Y +L M
Sbjct: 344 SEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEV 403
Query: 210 ------RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLC 263
++ +RP T F +++ G K + + + M + G V +YN I L
Sbjct: 404 NKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLS 463
Query: 264 KLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
R EE LL M G +P T+ + + ++ GA + M G EP
Sbjct: 464 NSNRLEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIK 523
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + LC+ A + +G++P + + G I V +A E+
Sbjct: 524 HYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEI 579
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 18/262 (6%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI-EPNSETY 185
ID +EM G L ++L S+ +++ +F E +YG +
Sbjct: 175 IDLVEMRLKEMCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNE---IYGRGWVDGHVL 231
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+ ++ +F + G+ + ++ M IR N F +L+ GF ++ + + ++ + M+K
Sbjct: 232 SILVLTFSKCGEVDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQK 291
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL-- 303
G A V+VY+ I LC K E+A LL M GI P++ LI +E ++
Sbjct: 292 SGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYR 351
Query: 304 -----------EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
E L+ S+ NG S + G Y +V + M K
Sbjct: 352 LIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKE 411
Query: 353 WV-PHFSTMKSLVTGLASISKV 373
V P ++ ++ GL + K+
Sbjct: 412 MVRPXTTSFSIVIDGLCNTGKL 433
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 141/301 (46%), Gaps = 13/301 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTR----PDLRQNERFHVHSIVLYGQANM-- 126
LD +++ + F A +LL+E+ R PD+ + +I++ G +
Sbjct: 243 LDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV------YTFNILIDGLCKLGR 296
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A M K G + + + NAL+ G LS + E K++F + + + PN +Y
Sbjct: 297 VSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTAL-PNVISYC 355
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ +L EM K++ P+ + LL G K + +++ M
Sbjct: 356 TLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRAS 415
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + YN+ + K ++ ++A AL ++ GI PN+ TY L+ G K G L+ A
Sbjct: 416 GQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYA 475
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K++F ++ GC+P+ + + + LC+ G + A + + ++P++ T ++V
Sbjct: 476 KEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535
Query: 367 L 367
+
Sbjct: 536 I 536
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 127/310 (40%), Gaps = 37/310 (11%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
F+ +S L + +NA+ L L+++P ++ + SI++ F ++
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPS--LITFSILI-----------NAFAQL 118
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
+ G S LLG IL ++ RI T ++K C G
Sbjct: 119 GQMGFAFS-------LLGNILKMGFQIDVRILTT----------------LMKGLCLKGR 155
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
S+L E + R + +G ++ G K K D ++ M+K + + +YN
Sbjct: 156 VLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNT 215
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM-TNG 316
I LCK +EA L M+ GI+ ++ +Y +IHGF G + A KL M G
Sbjct: 216 VIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRG 275
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
PD Y F + LC+ G A V + +GW P + +L+ G V EA
Sbjct: 276 KVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEA 335
Query: 377 NELIGLMKKR 386
++ M +R
Sbjct: 336 KQVFDKMVER 345
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 141/319 (44%), Gaps = 11/319 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
D + + ++ L + Q+ ++K +R +++ V+ G + ++D A
Sbjct: 173 FDEVCYGTIINGLCKIGKTRDAIQMFPKMK---KIRVYPNLIMYNTVIDGLCKQGLVDEA 229
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
EM + G+ V + N+++ G ++ ++ E + P+ T+N +I
Sbjct: 230 CGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILID 289
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIA 249
C+ G S Y+++A M ++ +P+ + L+ G+ + +V +M+E+ +
Sbjct: 290 GLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALP 349
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ ++ Y I CK++ +EA LL M ++ + P+ TY L+ G K G L
Sbjct: 350 NVIS-YCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDL 408
Query: 310 FASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+M G D +Y + YF + +++ AL + + + G P+ T L+ GL
Sbjct: 409 VEAMRASGQPADLITYNVLLDDYF--KHEKFDKALALFQHIIEIGISPNIRTYNILLDGL 466
Query: 368 ASISKVAEANELIGLMKKR 386
++ A E+ L+ +
Sbjct: 467 CKSGRLKYAKEIFQLLSAK 485
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G++ ++ T N ++ +C + D +L M R N + +L+ G Y+ +
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREA 268
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ MM + G + +++Y + I+ LCK R +A+ LLD M RG+ P++ TY +I G
Sbjct: 269 LVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ K G ++ A + A M GC PD + + Y LC GG+ + A ++ ++A+G+ P
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPT 387
Query: 357 FSTMKSLVTGLASISKVAEA 376
T +L+ G ++ +A
Sbjct: 388 VITFTNLINGYCKAERIDDA 407
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 6/260 (2%)
Query: 119 VLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
++YG Q + AM +M + G+ V A L+ G ++ R+F E +
Sbjct: 499 LIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLF-EMMEKN 557
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ + YN + + C+SG + YS L RK + + L+ GF K +
Sbjct: 558 GLTPDEQAYNVLTDALCKSGRAEEAYSFLV---RKGVVLTKVTYTSLVDGFSKAGNTDFA 614
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+++ M G + + Y++ +Q+LCK K+ EA ++LD M G+K N+ Y +I
Sbjct: 615 AVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISE 674
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG + AK LF M + G +P + + +F C+ G+ E A + G P
Sbjct: 675 MIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPD 734
Query: 357 FSTMKSLVTGLASISKVAEA 376
T + G + + A
Sbjct: 735 VVTYHIFINGCGHMGYMDRA 754
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 47/263 (17%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDA----LNALLLGCILSKNYEEVKRIFTEFPKVY 176
Y +A ID A++ M + + A +N L+ C L + E + +F
Sbjct: 398 YCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFAN----- 452
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY-------- 228
G+ PN Y +I +C+ G + + M + PNA +G L+ G
Sbjct: 453 GLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKA 512
Query: 229 ---------------------------KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
K+H++++ ++ +MMEK G+ YN+ +
Sbjct: 513 MALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDA 572
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
LCK R+EEA + L + +G+ TY L+ GF K GN + A L M N GC+ D
Sbjct: 573 LCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKAD 629
Query: 322 SYCFFMFTYFLCQGGEYETALKV 344
Y + + LC+ + AL +
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSI 652
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 115/275 (41%), Gaps = 4/275 (1%)
Query: 113 FHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
H++++++ G + I A +EM G+ SV NA++ G S ++ I
Sbjct: 284 LHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-K 342
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
+ G P+ TYN +I C G +L + P F L+ G+ K
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKA 401
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+ +D +V M + Y + I L K R +EAK L+ M + G+ PN+ Y
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIY 461
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
+I G+ K G + A ++F M + GC P+++ + Y L Q + A+ +
Sbjct: 462 TSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P +L+ G + A L +M+K
Sbjct: 522 DGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEK 556
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 49/317 (15%)
Query: 116 HSIVLYGQA--NMIDHAMQTFEEMDKYGLRQSVDALNALL------------------LG 155
++ ++ GQ + D+A + FE M+K GL A N L G
Sbjct: 531 YTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKG 590
Query: 156 CILSK-NYEEVKRIF-----TEFPKVY-------GIEPNSETYNKVIKSFCESGDSSSVY 202
+L+K Y + F T+F V G + + TY+ ++++ C+ +
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
SIL +M ++ N + ++++ KE K++ + M G Y + I S
Sbjct: 651 SILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSY 710
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
CK+ + EEA+ L+ M G+ P++ TY I+G G G ++ A M + CEP+
Sbjct: 711 CKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNC 770
Query: 323 YCFFMF-----------TYFLCQGG-----EYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ +++ +++ G E T ++ M G P T S++ G
Sbjct: 771 WTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAG 830
Query: 367 LASISKVAEANELIGLM 383
+++ EA L+ M
Sbjct: 831 FCKATRLEEACVLLDHM 847
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 111/258 (43%), Gaps = 26/258 (10%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+A++I +S++ + + L E+ + + V I Y + I+ A
Sbjct: 666 VAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVF-ISSYCKIGQIEEAEHLIG 724
Query: 136 EMDKYGLRQSVDALNALLLGC----ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
EM++ G+ V + + GC + + + +KR+ EPN TY ++K
Sbjct: 725 EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDA-----SCEPNCWTYWLLLKH 779
Query: 192 FCESG-------DSS---------SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
F + D+S +V+ +L M + + P + ++AGF K + E+
Sbjct: 780 FLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEE 839
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L M I+ +Y + I+ C +K + + + M+ G +P L++Y +LI
Sbjct: 840 ACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIV 899
Query: 296 GFGKEGNLEGAKKLFASM 313
G EG+ + AK LF +
Sbjct: 900 GLCDEGDYDRAKSLFCDL 917
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 75/200 (37%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P T+ +I +C++ + + M + + + +G+L+ K+ + ++
Sbjct: 383 GFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEA 442
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ L M G+A V +Y I CK+ A + M G PN TY LI+G
Sbjct: 443 KETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYG 502
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++ L A L M G P + C+ E++ A ++ G P
Sbjct: 503 LIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPD 562
Query: 357 FSTMKSLVTGLASISKVAEA 376
L L + EA
Sbjct: 563 EQAYNVLTDALCKSGRAEEA 582
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 121/325 (37%), Gaps = 43/325 (13%)
Query: 68 APESPLD---RMAFSIAVSKLSQANHFNAI-SQLLEELKTRPDLRQNERFHVHSIVLYGQ 123
AP SPLD +AF V++ H A + LL+ L R ++ + I G
Sbjct: 59 APVSPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGT 118
Query: 124 ANMIDHAMQTFEEMDKYG---LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
A + A+ + + + G L S N L + E + ++++ + G+ P
Sbjct: 119 AEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQ-EGLLP 177
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I ++C+ G + + +R ++ + LL G+
Sbjct: 178 DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGY------------- 224
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
C+ +A LL M G + N +Y LI G +
Sbjct: 225 ----------------------CRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEA 262
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+ A L M GC + + + + LC+ G A + +G VP T
Sbjct: 263 RCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTY 322
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
+++ G ++ +A + LM++
Sbjct: 323 NAMIDGYCKSGRMKDALGIKALMEQ 347
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 125/304 (41%), Gaps = 7/304 (2%)
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQ 144
L +AN + +L E+L+ + ++ I+ YG A D A E G
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTM-IMGYGSAGKFDEAYGLLERQKAKGSIP 123
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
SV A N +L + EE RIF E + PN TYN +I C G ++ I
Sbjct: 124 SVIAYNCILTCLGKKRRVEEALRIFEEMKR--DAVPNVPTYNILIDMLCREGKLNAALEI 181
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
+M R + PN +++ K K E+ + + M+ ++ I L K
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
R ++A +L + ML G P Y LI F K G E K++ M + GC PD
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD--L 299
Query: 325 FFMFTYFLC--QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ TY C + GE E + R A G++P + L+ GL E EL
Sbjct: 300 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 359
Query: 383 MKKR 386
MK++
Sbjct: 360 MKEQ 363
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 5/264 (1%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F E++ +G + + L+ G + + E +F K G ++ YN VI FC
Sbjct: 322 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAM-KEQGCVLDTHAYNAVIDGFC 380
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG + Y +L EM+ K P +G ++ G K + ++ + + + GI V
Sbjct: 381 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 440
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
VY+ I K+ R +EA +++ ++ +G+ PN+ T+ L+ K + A F SM
Sbjct: 441 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 500
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ C P+ + + LC+ ++ A + G P+ T ++++GLA +
Sbjct: 501 KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 560
Query: 374 AEANELIGLMKKRFPKSGDMWNAA 397
EA+ L RF +G + ++A
Sbjct: 561 LEASGLF----SRFKANGGIPDSA 580
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 5/302 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+A++ ++ L + ++ EE+K D N + I + + ++ A++ +
Sbjct: 126 IAYNCILTCLGKKRRVEEALRIFEEMKR--DAVPNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP-KVYGIEPNSETYNKVIKSFCE 194
+M++ GL +V +N ++ ++ EE IF KV PN+ T++ +I +
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKV--CTPNAVTFSSLIDGLGK 241
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G YS+ +M P A + L+ F+K + ED K+ + M G + + +
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 301
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
N + + K +E+ +AL + + G P+ +Y LIHG K G +LF +M
Sbjct: 302 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 361
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC D++ + C+ G+ A ++ KG P T S++ GLA I ++
Sbjct: 362 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 421
Query: 375 EA 376
EA
Sbjct: 422 EA 423
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 132/319 (41%), Gaps = 7/319 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAM 131
D ++SI + L +A N +L +K + + H ++ V+ G ++ ++ A
Sbjct: 333 DARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDT---HAYNAVIDGFCKSGKVNKAY 389
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q EEM G +V +++ G +E +F E K GI+ N Y+ +I
Sbjct: 390 QLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEE-AKSNGIKLNVVVYSSLIDG 448
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
F + G Y I+ E+ +K + PN + LL K + + Q M+
Sbjct: 449 FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPN 508
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
Y+I I LC++++ +A M G+KPN TY +I G K GN+ A LF+
Sbjct: 509 QITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFS 568
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
G PDS + L + A + + KG H T L+ L +
Sbjct: 569 RFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHK-A 627
Query: 372 KVAEANELIGLMKKRFPKS 390
+ E ++G + K KS
Sbjct: 628 ECLEQAAIVGAVLKETAKS 646
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 105/246 (42%), Gaps = 3/246 (1%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++EM G + +N + C+ E R +G P++ +Y+ +I
Sbjct: 285 KIYKEMVHTGCSPDLTLINTYM-DCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 343
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
++G ++ Y + M+ + + + ++ GF K K ++L+ M+ G
Sbjct: 344 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 403
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y I L K+ R +EA L + S GIK N+ Y LI GFGK G ++ A +
Sbjct: 404 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 463
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFSTMKSLVTGLASI 370
+ G P+ Y + L + E AL +C SM P+ T L+ GL +
Sbjct: 464 ELMQKGLTPNVYTWNCLLDALVKAEEINEAL-ICFQSMKDLKCPPNQITYSILINGLCRV 522
Query: 371 SKVAEA 376
K +A
Sbjct: 523 RKFNKA 528
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 89/248 (35%), Gaps = 46/248 (18%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA----------- 225
G P+S +++ + +S + I+ MR+ RP + + +L+
Sbjct: 5 GFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWV 64
Query: 226 ----------------------------------GFYKEHKYEDVGKVLQMMEKCGIASG 251
G+ K+++ +L+ + G
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPS 124
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN + L K +R EEA + + M R PN+ TY LI +EG L A ++
Sbjct: 125 VIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRD 183
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M G P+ + LC+ + E A + K P+ T SL+ GL
Sbjct: 184 DMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCG 243
Query: 372 KVAEANEL 379
+V +A L
Sbjct: 244 RVDDAYSL 251
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 37/312 (11%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++I V LS A + + EE+K++ +L + F+ I Y +A + A + F+E
Sbjct: 140 YTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDE- 197
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
C+ + GIEPN TY +I FC+ G
Sbjct: 198 ------------------CVGN-----------------GIEPNEHTYGALINGFCKIGQ 222
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ ++ +M+ + + N F ++ G+ +++ + ++ +MEK GI V YN
Sbjct: 223 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 282
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
L + R +EAK LL M+ +G++PN +Y LI EG++ A++LF M G
Sbjct: 283 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
EP + + + G A + KG VP + +LV G KV A
Sbjct: 343 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 402
Query: 378 ELIGLMKKRFPK 389
L MK+R K
Sbjct: 403 RLFEEMKQRGSK 414
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 117/286 (40%), Gaps = 17/286 (5%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK 102
RA R SE + D C G + P + + ++ + A L+ +++
Sbjct: 184 RAGNVRRASE-----VFDECVGNGIEP----NEHTYGALINGFCKIGQMEAAEMLVTDMQ 234
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
R + N+ I Y + NM+D A++ M+K G+ V N L G +
Sbjct: 235 VR-GVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 293
Query: 163 EEVK---RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+E K RI E G+ PN +Y +I C GD + EM P+
Sbjct: 294 DEAKNLLRIMIE----KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 349
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +++ G+ K+ + + MEK G+ + Y + C + + A L + M
Sbjct: 350 YNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMK 409
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
RG KPNL Y LI G KEG E A +L+ +M G PD +
Sbjct: 410 QRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 455
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 1/218 (0%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+++ E P+ +G++ N+ YN ++ ++ D V +L M + I P + +L+
Sbjct: 87 RQLLDEMPR-HGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 145
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G V V + M+ ++ V Y+ I + C+ A + D + GI+P
Sbjct: 146 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 205
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N TY LI+GF K G +E A+ L M G + F C+ + AL++
Sbjct: 206 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 265
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
G T +L GL +++ EA L+ +M
Sbjct: 266 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIM 303
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
V+ +C+SG + +L EM R ++ NA + LL + +E + V ++L++ME G
Sbjct: 73 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 132
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V Y I + L + + +A+ + M S+ + ++ Y +I+ + + GN+ A
Sbjct: 133 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 192
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F G EP+ + + C+ G+ E A + +G + +++ G
Sbjct: 193 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 252
Query: 368 ASISKVAEANELIGLMKK 385
+ V +A E+ +M+K
Sbjct: 253 CRKNMVDKALEIKMIMEK 270
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ F++M+ G ++ + N L+ G +K + G+ P+ T+N
Sbjct: 197 LEKAIEVFKKMETMGFSPTITSYNTLIAG-YCNKGLLNSGMKLKILMEKNGVRPDDVTFN 255
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC G I +EM+ + PN + L+ G+ + E G++ M +
Sbjct: 256 TLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRN 315
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + + YN I LC R+++A L+ + + PN T+ LI G N E A
Sbjct: 316 GIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERA 375
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L+ SM GC P+ + F M C+ +++ A++V R + P T+ L G
Sbjct: 376 FQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRG 435
Query: 367 L 367
L
Sbjct: 436 L 436
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 1/246 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y Q + +A+ F +M YG V++ NA + I S ++ F + Y I P
Sbjct: 121 YAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASI-SLQRGDIALTFYREMQRYRISP 179
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T N V+ +FC+ G + +M P T + L+AG+ + K+
Sbjct: 180 NVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 239
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+MEK G+ +N I C+ + EA + M + + PN TY LI+G+ +
Sbjct: 240 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 299
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN E +L M G + D + LC G + A + + + VP+ ST
Sbjct: 300 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 359
Query: 361 KSLVTG 366
+L+TG
Sbjct: 360 SALITG 365
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 2/247 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I Y +++ M+ M+K G+R N L+ G E +IF+E K
Sbjct: 223 IAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEM-KAND 281
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN+ TYN +I + + G+S + EM R I+ + + L+ G E + +
Sbjct: 282 VVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAA 341
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+++ +++ + + ++ I C K SE A L M+ G PN T+K LI F
Sbjct: 342 YLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTF 401
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH- 356
K + +GA ++ M+ PDS L G+ E ALK+C+ K +P
Sbjct: 402 CKNEDFDGAVEVVREMSERSIAPDSDTLSELCRGLWLSGKEELALKLCKEMEMKHLMPEG 461
Query: 357 FSTMKSL 363
F K++
Sbjct: 462 FDKXKTI 468
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 91/229 (39%), Gaps = 7/229 (3%)
Query: 158 LSKNYEEVKR------IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
L K Y ++K+ +F + K YG P E+ N I + + EM+R
Sbjct: 117 LFKTYAQMKKLRNAIDVFCQM-KDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRY 175
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
I PN +++ F K K E +V + ME G + + YN I C
Sbjct: 176 RISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSG 235
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L M G++P+ T+ LI+GF + G L A K+F+ M P++ +
Sbjct: 236 MKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLING 295
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
Q G E ++ + G T +L+ GL + +A L+
Sbjct: 296 YSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLV 344
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 12/295 (4%)
Query: 95 SQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLL 154
+Q+L L L N RFH S+ N ID A+ +F M + S N LL
Sbjct: 15 TQMLSLLAHFLSLSHN-RFHSKSL----HFNTIDGAISSFNRMLRMQPPPSTVDFNKLLT 69
Query: 155 GCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR 214
K++ + + + +GI PN T + +I SFC +S+LA++ + +
Sbjct: 70 SIAKMKHHSTLLSLSHQMDS-FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQ 128
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEA 271
P+ F L+ G Y E K +G+ L + +K G V Y I LCK+ + A
Sbjct: 129 PDTATFTTLIRGIYVEGK---IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
LL M+ + +PN+ Y +I K+ + A LF+ M G PD + + +
Sbjct: 186 IRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHA 245
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC E++ + + +P + ++V L KV EA++++ M +R
Sbjct: 246 LCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQR 300
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 137/319 (42%), Gaps = 7/319 (2%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMI 127
P S +D +++K+ + ++S ++ P++ + +H ++ + N +
Sbjct: 58 PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNI-----YTLHILINSFCHLNRV 112
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
A ++ K G + L+ G + E +F + G P+ TY
Sbjct: 113 GFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIG-EGFRPDVVTYGT 171
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+ G++S+ +L M +K+ +PN + ++ K+ + + + M G
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 231
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I+ + YN I +LC L + LL+ M+ I P++ ++ ++ KEG + A
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 291
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+ M G EP+ + C E + A+KV + KG +P+ + +L+ G
Sbjct: 292 DVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY 351
Query: 368 ASISKVAEANELIGLMKKR 386
I ++ +A L G M ++
Sbjct: 352 CKIQRIDKAMYLFGEMCRQ 370
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 3/261 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+ A ++M + G+ +V AL+ G C+LS+ E VK T K G PN +Y
Sbjct: 287 VTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK--GCMPNVISY 344
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I +C+ + EM R+ + P+ + L+ G + +D + M
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 404
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
C + Y I + LCK + EA ALL + + P++ I G + G LE
Sbjct: 405 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 464
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A+ LF+++++ G +PD + + + LC+ G + A K+ R G + ++
Sbjct: 465 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITR 524
Query: 366 GLASISKVAEANELIGLMKKR 386
G ++ + A +L+ M R
Sbjct: 525 GFLRNNETSRAIQLLQEMVAR 545
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ M + + +V A N ++ + E +F+E GI P+ TYN +I
Sbjct: 185 AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM-VTKGISPDIFTYNSLI 243
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C + V ++L EM I P+ F ++ KE K + V+ M + G+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y + C L +EA + D M+ +G PN+ +Y LI+G+ K ++ A L
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 363
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M PD+ + + LC + A+ + +A +P+ T + L+ L
Sbjct: 364 FGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCK 423
Query: 370 ISKVAEANELI 380
+AEA L+
Sbjct: 424 NRYLAEAMALL 434
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 1/242 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A++ F+ M G +V + N L+ G + ++ +F E + I P++ TY+
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELI-PDTVTYS 380
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C ++ EM S PN + +LL K + +L+ +E
Sbjct: 381 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + V NI I +C+ E A+ L + S+G++P++ TY +I+G + G L+ A
Sbjct: 441 NLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEA 500
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KLF M GC + + T + E A+++ + +A+G+ STM V
Sbjct: 501 SKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 560
Query: 367 LA 368
L+
Sbjct: 561 LS 562
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 111/272 (40%), Gaps = 2/272 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A F EM G+ + N+L+ ++ V + E I P+ ++N
Sbjct: 217 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD-SKIMPDVVSFN 275
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
V+ + C+ G + + ++ +M ++ + PN + L+ G + ++ KV M
Sbjct: 276 TVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK 335
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN I CK++R ++A L M + + P+ TY LIHG L+ A
Sbjct: 336 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 395
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M P+ + + +LC+ A+ + +A P + G
Sbjct: 396 IALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 455
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ ++ A +L + + + D+W ++
Sbjct: 456 MCRAGELEAARDLFSNLSSKGLQP-DVWTYSI 486
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 78/226 (34%), Gaps = 47/226 (20%)
Query: 208 MRRKSIRPNAT-----------------------------------------------DF 220
MRR S RP+ T DF
Sbjct: 5 MRRPSSRPSGTQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDF 64
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
LL K + + + M+ GI + +I I S C L R A ++L +L
Sbjct: 65 NKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILK 124
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
G +P+ T+ LI G EG + A LF M G PD + LC+ G
Sbjct: 125 LGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSA 184
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A+++ + + K P+ +++ L +V EA L M +
Sbjct: 185 AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 86/226 (38%), Gaps = 1/226 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ID AM F EM + L + L+ G + ++ +F E I P
Sbjct: 351 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI-P 409
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY ++ C++ + ++L + ++ P+ + + G + + E +
Sbjct: 410 NLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLF 469
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V Y+I I LC+ +EA L M G N Y + GF +
Sbjct: 470 SNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRN 529
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
A +L M G D+ +F L G ++ ++ R
Sbjct: 530 NETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 575
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 125/292 (42%), Gaps = 4/292 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQ 132
D + + + L + H N ++L+E K D + + F SIV + +D A+
Sbjct: 393 DSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD--KLDAFAYSSIVDGLSKQGRVDEALG 450
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+MDKYG S N L+ G + + EE F E + G P +YN +I
Sbjct: 451 IVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM-ETKGCSPTVVSYNTLINGL 509
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++ S YS + EM K +P+ + LL+ G + K + + + + G+ V
Sbjct: 510 CKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDV 569
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
++NI + LC + E+A L M PNL T+ L+ G K E A ++A
Sbjct: 570 TMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWAC 629
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
M G +PD + + LC G + + ++ G +P T LV
Sbjct: 630 MFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILV 681
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 133/318 (41%), Gaps = 7/318 (2%)
Query: 70 ESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMI 127
E +D +S + L + + ++ +E+ R + ++ +L G +A I
Sbjct: 285 ECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNA---LLNGFCRAGKI 341
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ + + M K V + N + G ++ EE ++ E + G +S TY
Sbjct: 342 KESFELWVMMGKENCHNVV-SYNIFIRGLFENRKVEEAISVW-ELLRRRGSGADSTTYGV 399
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C++G + IL E + + +A + ++ G K+ + ++ ++ M+K G
Sbjct: 400 LIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYG 459
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+V N I + + EEA M ++G P + +Y LI+G K A
Sbjct: 460 CELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAY 519
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
M +PD + + LCQG + + AL + R + KG P + L+ GL
Sbjct: 520 SFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGL 579
Query: 368 ASISKVAEANELIGLMKK 385
S K+ +A L MK+
Sbjct: 580 CSAGKIEDALLLYSNMKQ 597
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 136/345 (39%), Gaps = 37/345 (10%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK 102
R LK+E +P L + AS P F + + +LS +++++E +K
Sbjct: 11 RQLFKLLKAEKSPKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIK 70
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
T+ + E + + Y ++ M + A+ F++M++
Sbjct: 71 TQ-KCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEE----------------------- 106
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
++G +P +YN ++ +F E+ S LA I PN + +
Sbjct: 107 ------------IFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNI 154
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ K+ ++ + +L M + V Y I + K A + D M RG
Sbjct: 155 LIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERG 214
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC-EPDSYCFFMFTYFLCQGGEYETA 341
+ P++ Y +I GF K G+ K+++ + G C P+ + + LC+ G ++ +
Sbjct: 215 LVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDES 274
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
L++ T SL+ GL + V A E+ M KR
Sbjct: 275 LEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKR 319
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 117/284 (41%), Gaps = 40/284 (14%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F+EM + GL V N ++ G +Y + K I+ K + PN TYN +I
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMI 262
Query: 190 K-----------------------------------SFCESGDSSSVYSILAEMRRKSIR 214
C+ G+ + EM ++S+
Sbjct: 263 NGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVV 322
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
+ + LL GF + K ++ ++ MM K + V+ YNI I+ L + ++ EEA ++
Sbjct: 323 VDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVS-YNIFIRGLFENRKVEEAISV 381
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ + RG + TY LIHG K G+L A K+ +GG + D++ + L +
Sbjct: 382 WELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSK 441
Query: 335 GGEYETALKVCRASMAKG--WVPHFSTMKSLVTGLASISKVAEA 376
G + AL + G PH L+ G SK+ EA
Sbjct: 442 QGRVDEALGIVHQMDKYGCELSPHVCN--PLINGFVRASKLEEA 483
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 1/241 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ +E + + G L+ G + + + +I E K G + ++ Y+
Sbjct: 375 VEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKE-AKDGGDKLDAFAYS 433
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ + G I+ +M + + L+ GF + K E+ + ME
Sbjct: 434 SIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETK 493
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + V YN I LCK +R +A + + ML + KP++ TY L+ G + ++ A
Sbjct: 494 GCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMA 553
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L+ + G EPD + + LC G+ E AL + +P+ T +L+ G
Sbjct: 554 LNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDG 613
Query: 367 L 367
L
Sbjct: 614 L 614
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 41/269 (15%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEEL-KTRPDLRQNERFHVHSIVLYG--QANMIDH 129
LD A+S V LS+ + ++ ++ K +L HV + ++ G +A+ ++
Sbjct: 427 LDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSP----HVCNPLINGFVRASKLEE 482
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCI----LSKNYEEVKRIFTEFPK----------- 174
A+ F EM+ G +V + N L+ G S Y VK + + K
Sbjct: 483 AICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMD 542
Query: 175 -------------------VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
V G+EP+ +N ++ C +G + + M++ + P
Sbjct: 543 GLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLP 602
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N L+ G YK + E + M K G + YNI ++ LC R + AL
Sbjct: 603 NLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALF 662
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
D L GI P T+ L+ K G L+
Sbjct: 663 DDALKNGILPTSITWYILVRAVLKLGPLD 691
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 1/255 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ E M G+ V N+L+ G S + + + E K G+EPN TY +I
Sbjct: 206 ALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEV-VERMKADGVEPNVVTYTALI 264
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ +S+ M R + P+ L+ G ++ ++ + + + M+K G+A
Sbjct: 265 GEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVA 324
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y I SL K +R E+ LL M+SRG+ +L Y L+ GKEG +E AK +
Sbjct: 325 PNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDV 384
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ P+ + + C+ G + A +V K +P+ T S++ GL
Sbjct: 385 LRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVK 444
Query: 370 ISKVAEANELIGLMK 384
+ +A + + MK
Sbjct: 445 RGCLGKAADYMRKMK 459
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 110/259 (42%), Gaps = 37/259 (14%)
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
C L K + E K E + G+EP+ TYN +I + C G +S +L EM+R SI+P
Sbjct: 583 CTLGK-FSEAKSFLKEM-RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKP 640
Query: 216 NATDF-----GLLLAGFYKEHKY------------------------------EDVGKVL 240
N + GLL AG K+ K+ + + ++
Sbjct: 641 NLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIH 700
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++M G+ + + VYN + LC + A +LD ML+RGI P+ T+ LI G K
Sbjct: 701 ELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKS 760
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+L+ A ++A M + G P+ F L G A V G P+ T
Sbjct: 761 SHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTY 820
Query: 361 KSLVTGLASISKVAEANEL 379
LVTG A S EA L
Sbjct: 821 DILVTGYAKKSNKVEALRL 839
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 150/396 (37%), Gaps = 15/396 (3%)
Query: 1 MALLYRLRTN-FNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRIL 59
+A++ R+ T L V Y +L + +GD AAL + E+ +A + I
Sbjct: 207 LAVVERMTTQGVALDVVGYNSL-VAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIG 265
Query: 60 DICCGASLAPESPL-----------DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLR 108
+ C G + L D + S V L + F+ L E+ + +
Sbjct: 266 EYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMD-KIGVA 324
Query: 109 QNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI 168
N + I +A ++ EM G+ + AL+ EE K +
Sbjct: 325 PNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDV 384
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
+ I PN TY ++ + C +G+ +L +M KS+ PN F ++ G
Sbjct: 385 L-RHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLV 443
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K ++ M+ GIA V Y I K + E A + ML G++ N
Sbjct: 444 KRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNF 503
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
L++G K GN+EGA+ LF M G D + L + G A KV +
Sbjct: 504 VVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQEL 563
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
M K P + L ++ K +EA + M+
Sbjct: 564 MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMR 599
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P++ T+N +I C+S + ++I A+M + + PN F LL G + +
Sbjct: 742 GIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 801
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
VL M+K G+ Y+I + K EA L M+S+G P TY L+
Sbjct: 802 DTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSD 861
Query: 297 FGKEGNLEGAKKLFASMTNGG 317
F K G + AK+LF+ M G
Sbjct: 862 FAKAGMMNQAKELFSEMKRRG 882
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N +I +C+ D ++ +++ M + + + + L+AGF+ + +V++ M+
Sbjct: 190 WNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMK 249
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ V Y I CK K +EA +L +GM+ G+ P++ T L+ G ++G
Sbjct: 250 ADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFS 309
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A LF M G P+ + L + +L + +++G V +L+
Sbjct: 310 EAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALM 369
Query: 365 TGLASISKVAEANELI 380
L K+ EA +++
Sbjct: 370 DRLGKEGKIEEAKDVL 385
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 2/217 (0%)
Query: 97 LLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGC 156
+L+E+ TR F+ I+ + +++ +D+A + +M GL ++ N LL G
Sbjct: 734 VLDEMLTRGIAPDTITFNAL-ILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGL 792
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+ E + ++ KV G+EPN+ TY+ ++ + + + + EM K P
Sbjct: 793 ESAGRIGEADTVLSDMKKV-GLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 851
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
A+ + L++ F K ++ M++ G+ + Y+I + KL+ E + LL
Sbjct: 852 ASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLK 911
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
M G KP+ T + F + G A++L ++
Sbjct: 912 DMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 116/291 (39%), Gaps = 37/291 (12%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
+LL+E+K R ++ N + +V +A ++ A EM G + +L
Sbjct: 628 KLLKEMK-RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
C S+ + + I E G+ + YN ++ C G + + +L EM + I P
Sbjct: 687 CSGSRRPDVILEIH-ELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAP 745
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
+ F L+ G K ++ + M G++ + +N + L R EA +L
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL 805
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M G++PN TY L+ G+ K+ N A +L+ M
Sbjct: 806 SDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM---------------------- 843
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
++KG++P ST SL++ A + +A EL MK+R
Sbjct: 844 -------------VSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRR 881
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ PN T++ +I + G + +M+ I PN +G L+ GF+K E
Sbjct: 428 VIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAAL 487
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V + M G+ + V + + L K E A+AL M RG+ + Y L+ G
Sbjct: 488 DVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGL 547
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K GN+ A K+ + PD+ + +F LC G++ A + G P
Sbjct: 548 FKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQ 607
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
+T +++ K ++A +L+ MK+
Sbjct: 608 ATYNTMIAARCREGKTSKALKLLKEMKR 635
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 92/210 (43%), Gaps = 2/210 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ ++ +YN + + E G +L+EM ++ + + L G + +
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170
Query: 238 KVLQMMEKCGIASGVNV--YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ +M+ + G++V +N I CK++ A A+++ M ++G+ ++ Y L+
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GF G+ + A ++ M G EP+ + C+G + A + + G +P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
T+ +LV GL + +EA L M K
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDK 320
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 6/207 (2%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH + +G A +A +EM G+ NAL+LG S + + I+ +
Sbjct: 719 VHVLCCHGMAR---NATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLH 775
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE-HKY 233
G+ PN T+N ++ +G ++L++M++ + PN + +L+ G+ K+ +K
Sbjct: 776 -QGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKV 834
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E + +M+ K G + YN + K +AK L M RG+ TY L
Sbjct: 835 EALRLYCEMVSK-GFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDIL 893
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEP 320
++G+ K N + L M G +P
Sbjct: 894 LNGWSKLRNGIEVRILLKDMKELGFKP 920
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 79/179 (44%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+E N+ + ++ ++G+ ++ +M + + + ++ L+ G +K
Sbjct: 497 GVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAA 556
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
KV Q + + ++ VYN+ I LC L + EAK+ L M + G++P+ TY +I
Sbjct: 557 FKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAA 616
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+EG A KL M +P+ + L + G + A + + G+ P
Sbjct: 617 RCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAP 675
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 4/213 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEM--RRKSIRP-NATDFGLLLAGFYKEHKY 233
G+ + T + + C +G + LAEM R + I + + L+ G+ K
Sbjct: 145 GVSWDGVTVSTALVGLCRTGLVGEA-AALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDM 203
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
V++ M G+A V YN + ++ A +++ M + G++PN+ TY L
Sbjct: 204 AAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTAL 263
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I + K ++ A L+ M G PD LC+ G++ A + R G
Sbjct: 264 IGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGV 323
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T +L+ LA + +E+ L+G M R
Sbjct: 324 APNHVTYCTLIDSLAKARRGSESLGLLGEMVSR 356
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A + +M + N+L+ G + S +E RI + + +G PN TY+
Sbjct: 172 MDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSR-HGQPPNGVTYS 230
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C+ G + IL M + PN +G LL G+ + ++ ++ +M +
Sbjct: 231 MLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQN 290
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ +++NI+I + K R +EA + M +G+ P++ +Y +I G K G L+ A
Sbjct: 291 GVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAA 350
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
F M + G PD F + G++E A ++ M +G P +++
Sbjct: 351 MSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDK 410
Query: 367 LASISKVAEANELIGLM 383
L KV EA L LM
Sbjct: 411 LFKEGKVTEAKTLFDLM 427
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 4/217 (1%)
Query: 163 EEVKRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+EV + +T F ++ GI P+ T N +I C+ +L +M K I P+ T +
Sbjct: 135 DEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTY 194
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML- 279
L+ G+ + ++ ++L+ M + G Y++ I LCK EA+ +L+ M+
Sbjct: 195 NSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQ 254
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
SRG PN+ TY L+HG+ +G+L L M G PD + F + Y + G +
Sbjct: 255 SRG-NPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLD 313
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
A+ +G +P + +++ GL I ++ A
Sbjct: 314 EAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAA 350
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 10/260 (3%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A ++ K GLR + + +L K + I + G P+ +Y ++
Sbjct: 32 AFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLL 91
Query: 190 KSFCESGDSSSVYSILAEMRRKS--IRPNATDFGLLLAGFYKEHKYEDVGKV----LQMM 243
K C+ ++ M PN + ++ GF+KE ++VGK +M+
Sbjct: 92 KGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKE---DEVGKAYTLFCEML 148
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
++ GI V N I LCK++ ++A+ +L M + I P+ TY L+HG+ G L
Sbjct: 149 DR-GIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQL 207
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
+ A ++ M+ G P+ + M LC+ G + A ++ + + P+ +T L
Sbjct: 208 KEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGL 267
Query: 364 VTGLASISKVAEANELIGLM 383
+ G A+ + E N LI LM
Sbjct: 268 LHGYATKGDLVEMNNLIDLM 287
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 20/263 (7%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQA------- 124
P + + +S+ + L + F ++ E L + R N + +L+G A
Sbjct: 223 PPNGVTYSMLIDCLCK---FGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVE 279
Query: 125 --NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
N+ID +Q G+R N + + +E F + + G+ P+
Sbjct: 280 MNNLIDLMVQN-------GVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKM-RQQGLMPDI 331
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
+Y +I C+ G + S +M + P+ F L+ GF K+E ++
Sbjct: 332 ISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYE 391
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M GI V V+ I L K + EAK L D M +KPN+ +Y +IHG+ G
Sbjct: 392 MMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGK 451
Query: 303 LEGAKKLFASMTNGGCEPDSYCF 325
L+ KL M + G +P++ F
Sbjct: 452 LDEVLKLLDDMLSVGLKPNAVTF 474
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED- 235
G+ P+ +N I ++ + G +MR++ + P+ +G ++ G K + +
Sbjct: 291 GVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAA 350
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+ + QM++ G++ + V+ I + E+A+ L M+ RGI+P + + +I
Sbjct: 351 MSQFCQMIDD-GLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMID 409
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
KEG + AK LF M +P+ SY + YFL G+ + LK+ ++ G
Sbjct: 410 KLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFL--AGKLDEVLKLLDDMLSVGL 467
Query: 354 VPHFSTMKSLVTGLASIS---KVAEANELI 380
P+ T +L+ + S+ VA N LI
Sbjct: 468 KPNAVTFNTLLDDMLSMGLKPDVATCNTLI 497
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 17/196 (8%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D AM F +M GL + L+ G + +E+ + +F E GI P +
Sbjct: 347 LDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMD-RGIRPTVVVFT 405
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + G + ++ M S++PN + ++ G++ K ++V K+L M
Sbjct: 406 TMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSV 465
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ +N LLD MLS G+KP++ T LI ++G +E
Sbjct: 466 GLKPNAVTFN----------------TLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDV 509
Query: 307 KKLFASMTNGGCEPDS 322
LF M + + D+
Sbjct: 510 LTLFREMLSKAAKTDT 525
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 24/216 (11%)
Query: 74 DRMAFSIAVSKLSQANHFNA-ISQLLEELKT--RPDLRQNERFHVHSIVLYGQANMIDHA 130
D +++ + L + +A +SQ + + PD+ +H +YG+ + A
Sbjct: 330 DIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNL-IHGFSMYGKW---EKA 385
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F EM G+R +V ++ E K +F P + ++PN +YN +I
Sbjct: 386 EELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMP-IASVKPNVVSYNAIIH 444
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ +G V +L +M ++PNA F LL +L M G+
Sbjct: 445 GYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLL------------DDMLSM----GLKP 488
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
V N I S C+ R E+ L MLS+ K +
Sbjct: 489 DVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTD 524
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 37/312 (11%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEM 137
++I V LS A + + EE+K++ +L + F+ I Y +A + A + F+E
Sbjct: 216 YTILVDGLSAARDITKVEAVFEEMKSK-NLSGDVYFYSSVINAYCRAGNVRRASEVFDE- 273
Query: 138 DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGD 197
C+ + GIEPN TY +I FC+ G
Sbjct: 274 ------------------CVGN-----------------GIEPNEHTYGALINGFCKIGQ 298
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ ++ +M+ + + N F ++ G+ +++ + ++ +MEK GI V YN
Sbjct: 299 MEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNT 358
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
L + R +EAK LL M+ +G++PN +Y LI EG++ A++LF M G
Sbjct: 359 LACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
EP + + + G A + KG VP + +LV G KV A
Sbjct: 419 AEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVAL 478
Query: 378 ELIGLMKKRFPK 389
L MK+R K
Sbjct: 479 RLFEEMKQRGSK 490
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 117/286 (40%), Gaps = 17/286 (5%)
Query: 43 RATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK 102
RA R SE + D C G + P + + ++ + A L+ +++
Sbjct: 260 RAGNVRRASE-----VFDECVGNGIEP----NEHTYGALINGFCKIGQMEAAEMLVTDMQ 310
Query: 103 TRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
R + N+ I Y + NM+D A++ M+K G+ V N L G +
Sbjct: 311 VR-GVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRM 369
Query: 163 EEVK---RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
+E K RI E G+ PN +Y +I C GD + EM P+
Sbjct: 370 DEAKNLLRIMIE----KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 425
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ +++ G+ K+ + + MEK G+ + Y + C + + A L + M
Sbjct: 426 YNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMK 485
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF 325
RG KPNL Y LI G KEG E A +L+ +M G PD +
Sbjct: 486 QRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALY 531
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+++ E P+ +G++ N+ YN ++ ++ D V +L M + I P + +L+
Sbjct: 163 RQLLDEMPR-HGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVD 221
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKP 285
G V V + M+ ++ V Y+ I + C+ A + D + GI+P
Sbjct: 222 GLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEP 281
Query: 286 NLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC 345
N TY LI+GF K G +E A+ L M G + F C+ + AL++
Sbjct: 282 NEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIK 341
Query: 346 RASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G T +L GL +++ EA L+ +M ++
Sbjct: 342 MIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 94/198 (47%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
V+ +C+SG + +L EM R ++ NA + LL + +E + V ++L++ME G
Sbjct: 149 VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEG 208
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
I V Y I + L + + +A+ + M S+ + ++ Y +I+ + + GN+ A
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
++F G EP+ + + C+ G+ E A + +G + +++ G
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 368 ASISKVAEANELIGLMKK 385
+ V +A E+ +M+K
Sbjct: 329 CRKNMVDKALEIKMIMEK 346
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ Y+ +I C+ Y + +EM + I P+ + L+ GF + + +
Sbjct: 148 PDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGL 207
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M I + YN I +LCK + +E+K LL M +G+KP++ Y L+ G+
Sbjct: 208 LNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCL 267
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G ++ AK++F M G PD Y + + LC+G + A+ + R + K +P T
Sbjct: 268 VGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVT 327
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
SL+ GL + ++ +L M R
Sbjct: 328 YSSLIDGLCKLGRITTILDLTKEMHHR 354
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M K G++ V + L+ G L ++ K+IF + G+ P+ +YN +I C+
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQT-GVNPDVYSYNIIINGLCKGK 304
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
++L EM K++ P+ + L+ G K + + + + M G + + YN
Sbjct: 305 RVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYN 364
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
+ LCK + ++A AL M RGI+PN TY LI G K G L+ + LF +
Sbjct: 365 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVK 424
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G D + + + LC+ G ++ AL + G +P+ T + ++ L + +A
Sbjct: 425 GYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKA 484
Query: 377 NELI 380
+L+
Sbjct: 485 EKLL 488
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 116/255 (45%), Gaps = 5/255 (1%)
Query: 115 VHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
++SI++ Y + A Q F M + G+ V + N ++ G K +E + E
Sbjct: 257 IYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREM 316
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
I P++ TY+ +I C+ G +++ + EM + N + LL G K
Sbjct: 317 LHKNMI-PDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQN 375
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ + M++ GI Y I LCK R ++ +AL +L +G ++ TY
Sbjct: 376 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTV 435
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I G KEG + A + + M + GC P++ F + L + E + A K+ +AKG
Sbjct: 436 MISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKG 495
Query: 353 WVP--HFSTMKSLVT 365
+P +F + +S VT
Sbjct: 496 LLPFRNFHSERSSVT 510
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 8/214 (3%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI P+ T + +I FC G + +S+L ++ + +PN L+ G + +V
Sbjct: 40 GIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG---EV 96
Query: 237 GKVLQMMEKCGIASGVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
K L +K +A G + Y I + LCK+ + A LL + R +P++ Y
Sbjct: 97 KKSLHFHDKV-VAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I G K+ ++ A L++ M G PD + C G+ A + + K
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P+ T +L+ L KV E+ L+ +M K+
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK 249
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P +FG +L K Y V + + ME GI + +I I C L + + ++
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
L +L G +PN L+ G +G ++ + + G + D + + LC+
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
GE A+K+ R + P +++ GL V EA +L M R FP
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFP 183
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 117/240 (48%), Gaps = 1/240 (0%)
Query: 140 YGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
+G++ N LL + + ++ +++E GI+P+ T+N ++K+ C +
Sbjct: 48 FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM-GARGIKPDVVTFNTLMKALCRAHQVR 106
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ +L EM + + P+ T F L+ GF +E E +V M + G ++ N+ I
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CKL R E+A + ++ G +P+ TY ++G + ++ A K+ M G +
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
PD + + + LC+ G+ E A + + +G +P +T +L+ L + +++ EA +L
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 10/316 (3%)
Query: 59 LDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHV 115
LD+ ++ SP D F+I ++ L + + +L EE+K PD +
Sbjct: 284 LDLARQVTVKGVSP-DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPD-EVTYNTLI 341
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
++ G+ + A+ ++M+ G +S N ++ G EE + +F + +
Sbjct: 342 DNLCSLGK---LGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM-DL 397
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
GI N+ T+N +I C+ + ++ +M + ++PN + +L + K+ +
Sbjct: 398 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 457
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L+ M G V Y I LCK R++ A +L GM +G++P Y ++
Sbjct: 458 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 517
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ-GGEYETALKVCRASMAKGWV 354
+ N+ A LF M G PD+ + + LC+ GG + A + KG++
Sbjct: 518 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFI 577
Query: 355 PHFSTMKSLVTGLASI 370
P FS+ + L GL ++
Sbjct: 578 PEFSSFRMLAEGLLNL 593
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 6/300 (2%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
+++D+ P D ++I V+ L + +L ++ R L F+
Sbjct: 214 LKVMDVMVQEGHDP----DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNT 269
Query: 116 HSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I N ++ A+ ++ G+ V N L+ + R+F E K
Sbjct: 270 -LIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KN 327
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G P+ TYN +I + C G +L +M + + ++ G K+ + E+
Sbjct: 328 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 387
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+V M+ GI+ +N I LCK K+ ++A L++ M+S G++PN TY ++
Sbjct: 388 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 447
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ K+G+++ A + +MT G E D + LC+ G + ALKV R KG P
Sbjct: 448 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 507
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 134/311 (43%), Gaps = 4/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ + L +A+ +LEE+ +R + +E + + + I+ A++
Sbjct: 88 DVVTFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAALRV 146
Query: 134 FEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
M + G + +N L+ G C L + + + I E G EP+ TYN +
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD--GFEPDQITYNTFVNGL 204
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C++ ++ M ++ P+ + +++ K + E+ +L M G +
Sbjct: 205 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 264
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+N I +LC R EEA L + +G+ P++ T+ LI+ K G+ A +LF
Sbjct: 265 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 324
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M N GC PD + LC G+ AL + + + G T +++ GL +
Sbjct: 325 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 384
Query: 373 VAEANELIGLM 383
+ EA E+ M
Sbjct: 385 IEEAEEVFDQM 395
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 135/329 (41%), Gaps = 9/329 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D++ ++ V+ L Q +H ++++ + PD+ V+ + GQ ++ A
Sbjct: 193 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVF-TYNIVVNCLCKNGQ---LEEA 248
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+M G + N L+ EE + + V G+ P+ T+N +I
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQV-TVKGVSPDVYTFNILIN 307
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+ C+ GD + EM+ P+ + L+ K +L+ ME G
Sbjct: 308 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 367
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
YN I LCK R EEA+ + D M +GI N T+ LI G K+ ++ A +L
Sbjct: 368 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + G +P++ + C+ G+ + A + A G+ T +L+ GL
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 487
Query: 371 SKVAEANELI-GLMKKRFPKSGDMWNAAL 398
+ A +++ G+ K + +N L
Sbjct: 488 GRTQVALKVLRGMRIKGMRPTPKAYNPVL 516
>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 144/333 (43%), Gaps = 39/333 (11%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLR 143
KLS+ F+ I LL L++ P E V I YG A A++TF ++ +G+R
Sbjct: 93 KLSKFRCFSEIESLLAGLRSSPPHCCGEEPIVTVIRGYGLAGKPVRALKTFLRIESFGIR 152
Query: 144 QSVDALNALLLGCILSKNY------------------------------------EEVKR 167
SV ++NALL + +K Y E +
Sbjct: 153 PSVRSINALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVK 212
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+ E P + G+ PN +Y V+ F GD + E+ + P+ T + +L+ GF
Sbjct: 213 VLDEMPGM-GLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGF 271
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ K D +V+ +ME G+ Y + IQ+ CK K+S EA L++ M+++ +
Sbjct: 272 CRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGS 331
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD-SYCFFMFTYFLCQGGEYETALKVCR 346
+ ++ +EGN+E A +++ ++ C + + ++LC+ G+ A V
Sbjct: 332 ELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNV-F 390
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
KG V T +L+ GL ++ EA L
Sbjct: 391 DEFGKGSVASLLTYNTLIAGLCEGGELCEAARL 423
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 127/314 (40%), Gaps = 46/314 (14%)
Query: 79 SIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG---QANMIDHAMQTFE 135
+I + L + N ++L+E+ P + ++ VL G + +M D AM+ F
Sbjct: 195 NILLKALCKGNEVEVAVKVLDEM---PGMGLVPNVVSYTTVLGGFVWRGDM-DGAMKVFR 250
Query: 136 EMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
E+ G V + L+ G C L K + ++ + + G+EPN TY +I+++C+
Sbjct: 251 EVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIR--VMDIMEDNGVEPNEVTYGVMIQAYCK 308
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK--CGIASGV 252
S +++ +M K + + ++ +E E ++ +M+ + CG+ V
Sbjct: 309 EKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLNGAV 368
Query: 253 NV---------------------------------YNIRIQSLCKLKRSEEAKALLDGML 279
V YN I LC+ EA L D M+
Sbjct: 369 VVSTLIHWLCKKGKVLEARNVFDEFGKGSVASLLTYNTLIAGLCEGGELCEAARLWDDMV 428
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCF-FMFTYFLCQGGEY 338
+G+ PN TY LI GF K GN + ++ M C P+ + + L GG
Sbjct: 429 EKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMK 488
Query: 339 ETALKVCRASMAKG 352
+ KV +M+ G
Sbjct: 489 QEINKVVSLAMSTG 502
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 11/212 (5%)
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
P G EP VI+ + +G + IRP+ LL + +
Sbjct: 115 PHCCGEEP----IVTVIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKR 170
Query: 233 YEDVGKVLQMMEKCG----IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
Y + + CG + V NI +++LCK E A +LD M G+ PN+
Sbjct: 171 YR---LAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVV 227
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
+Y ++ GF G+++GA K+F + + G PD + + C+ G+ A++V
Sbjct: 228 SYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIM 287
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
G P+ T ++ K EA LI
Sbjct: 288 EDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLI 319
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F+E K G S+ N L+ G E R++ + + G+ PN+ TYN +I
Sbjct: 386 ARNVFDEFGK-GSVASLLTYNTLIAGLCEGGELCEAARLWDDMVE-KGVAPNAFTYNMLI 443
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDF-----GLLLAGFYKEHKYEDVGKVLQMME 244
K FC+ G++ +L EM PN + + G+LL G K +++ KV+ +
Sbjct: 444 KGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMK----QEINKVVSLAM 499
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG-MLSRGIKPNLDTYKHLIHGF 297
G+ + +++NI ++ + EA+ LD +L +P L + H I F
Sbjct: 500 STGVDA--DLWNIFVKPVVGNDNGGEAE--LDRILLENKAEPALHIFCHCIVTF 549
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 4/271 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+HS V G+ + A F+ + K+GLR SV + N L+ G I + E R+ +
Sbjct: 143 MHSFVKEGEIRL---AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM-Q 198
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G++P+ TY+ +I C+ + EM K + PN F L+ G K + +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
++ + M ++ + YN I LCK ++A+ L+D M+ +G+KP+ TY LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G KEG+LE A + M D + LCQ G A K+ R ++ G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T ++ V ++L+ M++
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 11/306 (3%)
Query: 63 CGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS--IVL 120
C + PE+ + I VS+ + + + +LE T Q +V S I
Sbjct: 24 CTHQMLPEA---KTLIQIVVSRKGKGSASAVFAAILETKGT-----QRSDIYVFSGLITA 75
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ + A++ + ++ R D +L + K ++ V + E + G
Sbjct: 76 YLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLEC-GYPA 134
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ +N ++ SF + G+ S+ + + +RP+ F L+ G+ K + ++
Sbjct: 135 SLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLK 194
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ G+ V Y++ I LCK + ++A L D ML +G+ PN T+ LI G K
Sbjct: 195 NAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G ++ A +++ M + PD + Y LC+ G+ + A + + KG P T
Sbjct: 255 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITY 314
Query: 361 KSLVTG 366
+L+ G
Sbjct: 315 TTLIDG 320
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 9/239 (3%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYG 141
KL N + ++ +PD+ + +S+++ G + + +D A F+EM G
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDV------YTYSVLINGLCKESKMDDANVLFDEMLDKG 236
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
L + L+ G + + I+ + + P+ TYN +I C+ GD
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS-QSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
++ EM K ++P+ + L+ G KE E + + M K I Y I
Sbjct: 296 QDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISG 355
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LC+ RS +A+ +L MLS G+KP + TY +I+ F K+G++ KL M G P
Sbjct: 356 LCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMP 414
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ F KE + V + K G+ V +N + KL E L + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G++P++ TY LI+G KE ++ A LF M + G P+ F C+ G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
A+++ + +++ P T +L+ GL + +A +LI M
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ GFY+E+ +CG + + +NI + S K A+++ D + G
Sbjct: 119 LVWGFYEENL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
++P++ ++ L++G+ K G+L +L +M G +PD Y + + LC+ + + A
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + KG VP+ T +L+ G +V A E+
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 2/263 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI-LSKNYEEVKRIFTEFPKVY 176
I+ Y + I+ A+Q + K V + LL + L++ + E Y
Sbjct: 162 IIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLD-Y 220
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN +N ++ FC+ GD + + E+ R+ +RP+ F L++G+ + E+
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ +ME I+ V Y+ I LCK R EEA L D M G+ PN T+ LI G
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G ++ A + F M + G PD + LC+ G+ + A K+ + G+ P
Sbjct: 341 QCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPD 400
Query: 357 FSTMKSLVTGLASISKVAEANEL 379
T +L+ G + A E+
Sbjct: 401 KITFTTLMDGCCKDGDMDSALEI 423
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 125/274 (45%), Gaps = 3/274 (1%)
Query: 114 HVHSIVLYGQANMID--HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
++ +I+++G + D +A F+E+ + GLR SV + N L+ G SKN EE +
Sbjct: 227 YLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEE-GFVLKS 285
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
+ I P+ TY+ +I C+ + EM + PN F L+ G K
Sbjct: 286 VMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHG 345
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
K + + ++M+ GI + YN I LC+ +EA+ LL+ M+ G KP+ T+
Sbjct: 346 KIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFT 405
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ G K+G+++ A ++ M G E D F LC+ G A ++ + ++
Sbjct: 406 TLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSA 465
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
G P T ++ V +L+ M++
Sbjct: 466 GHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQR 499
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 9/265 (3%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A++ FE M G+R + NAL+ G + +E +++ E G +P+ T+
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIG-NGFKPDKITFT 405
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+ GD S I M + I + F L++G ++ + D ++L+ M
Sbjct: 406 TLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSA 465
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G Y + I CK + LL M G P + TY L++GF K+G ++ A
Sbjct: 466 GHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNA 525
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K L +M N P+ F + C+ G K+ KG V +++ +LV
Sbjct: 526 KMLLHAMLNMEVVPNDITFNILLDGHCKHGS-SVDFKIFNGE--KGLVSDYASYTALVNE 582
Query: 367 LASISK-----VAEANELIGLMKKR 386
ISK V E IG+ ++
Sbjct: 583 SIKISKDQLKSVLECPTHIGIQYRQ 607
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 1/240 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A F+EM + GL + L+ G + R F E K GI P+ TYN
Sbjct: 312 VEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNF-EIMKDRGIRPDLITYN 370
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C GD +L EM +P+ F L+ G K+ + ++ M +
Sbjct: 371 ALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEE 430
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + I LC+ R +A+ +L MLS G KP+ TY +I F K+G+++
Sbjct: 431 GIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMG 490
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KL M G P + C+ G+ + A + A + VP+ T L+ G
Sbjct: 491 AKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDG 550
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V ++NI + CK+ A+ + D + RG++P++ ++ LI G+ + N+E
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L + M + PD + + LC+ E A + G VP+ T +L+ G
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDG 340
Query: 367 LASISKVAEANELIGLMKKR 386
K+ A +MK R
Sbjct: 341 QCKHGKIDLALRNFEIMKDR 360
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE-EAKALLDGM 278
F L+ + ED + L++++K + V + ++ + KL + +
Sbjct: 158 FDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEV 217
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
L G PN+ + L+HGF K G++ A+ +F ++ G P F C+
Sbjct: 218 LDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNV 277
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
E + ++ P T +L+ GL S+V EAN L M
Sbjct: 278 EEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM 322
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK-----SIRPNATDFGLLLAGFYKEH 231
GI P TYN ++K F +G + +M+++ S +P+ + ++ G
Sbjct: 229 GIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAG 288
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ E KV M K G A V YN IQ +CK E+A + DGM +G PN+ TY
Sbjct: 289 QLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYT 348
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
LI G G ++ KL M NGGCEP + + +L + GE E L + M+K
Sbjct: 349 VLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFE-KMSK 407
Query: 352 G 352
G
Sbjct: 408 G 408
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 6/223 (2%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
R+F + + + + +N ++ + +S + S++ + ++ P+ + L G
Sbjct: 150 RLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQR-FTPDVVTYNTLADG 208
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG---- 282
+ + VL++M + GIA YNI ++ + + A M RG
Sbjct: 209 WCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDE 268
Query: 283 -IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
KP++ +Y ++HG G G LE A+K+F M GC P + +C+ G E A
Sbjct: 269 SCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDA 328
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ V KG+VP+ T L+ GL K+ +L+ MK
Sbjct: 329 VTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMK 371
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TYN + +C D+S +L M I P T + ++L GF++ +
Sbjct: 197 PDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDF 256
Query: 240 LQMMEKCG-----IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
M+K G V Y + L + E+A+ + D M G P++ TY LI
Sbjct: 257 FLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALI 316
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
K+GN+E A +F M G P+ + + LC G+ + LK+ G
Sbjct: 317 QVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCE 376
Query: 355 PHFSTMKSLV 364
P T L+
Sbjct: 377 PIVQTYNVLI 386
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 25/277 (9%)
Query: 48 RLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR--- 104
R+K S +L + + +AP + ++I + +A ++K R
Sbjct: 211 RVKDTSRALDVLRLMVESGIAPT----KTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSK 266
Query: 105 -----PDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
PD+ VH + + GQ ++ A + F+EM K G SV NAL+
Sbjct: 267 DESCKPDVVSYTTM-VHGLGVAGQ---LEKARKVFDEMAKEGCAPSVATYNALIQVICKK 322
Query: 160 KNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
N E+ +F +V G PN TY +I+ C +G +L M+ P
Sbjct: 323 GNVEDAVTVFDGM-RVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQT 381
Query: 220 FGLLLAGFYKEHKYE---DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE---AKA 273
+ +L+ ++E + E D+ + + E+C + YNI I ++ KR+E+ A
Sbjct: 382 YNVLIRYLFEEGEMEKGLDLFEKMSKGEEC--LPNQDTYNIIISAMFMRKRAEDMVLAAR 439
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+++ M+ RG P + +++G GN E ++KL
Sbjct: 440 MVEEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRKLL 476
>gi|326487462|dbj|BAJ89715.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505214|dbj|BAK02994.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 428
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 27/361 (7%)
Query: 43 RATIARL----KSESNPFRILDICCGASLAPESP---LDRMAFSIAVSKLSQANHFNAIS 95
RA+I L ++E++P R+ + A +P+ R FS+A S+L + + +
Sbjct: 45 RASIIDLQLAVRAETDPDRVHSLVASALSSPDYHRLHTSRALFSLAASRLDRLRRPDLAA 104
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
LL++L + ++ L+ + A + + + S L G
Sbjct: 105 SLLDQLLASAPVSPG--LLARALSLFPGPDDAVRAFSSSAPAARSDVSLSALLSALLRAG 162
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR- 214
I +++K F G+ P S ++N ++ + +S D + +L EM +K +
Sbjct: 163 RI-----DDLKSTFKSAESSLGVAPGSASHNVLLHTLVKSSDLPAARKLLNEMAKKKFKH 217
Query: 215 ---PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
P+ + LLAGF ++ E+ K+L+ + + + V YN R+ + + +
Sbjct: 218 RPPPDIISYNTLLAGFSEQDDVEEFEKLLKEINENKLEPNVVTYNCRMHWFARKGETFKG 277
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM---------TNGGCEPDS 322
+ LLD M S+G+ PN TY L+ G+ KEGN+ A ++F M ++ G S
Sbjct: 278 EELLDVMESKGVLPNYVTYNALVQGYCKEGNVGAAMRVFKRMKVMKRREGRSDLGVSVHS 337
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + L + + AL +C + A P F +K LV GL + AEA ++
Sbjct: 338 QTYVLLFRTLVEKERLDDALWLCNSCFAMKAAPSFEAVKGLVEGLVKGGRSAEAKAVVAK 397
Query: 383 M 383
M
Sbjct: 398 M 398
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 4/260 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ F++M + V AL+ G + +E +F E + G P TYN
Sbjct: 11 VDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEE-ARAKGCHPTVVTYN 69
Query: 187 KVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I C+ G + ++ +M RP + L+ G ++H+ + K+L+ M
Sbjct: 70 TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G A YN + +L RS+EA +LL+ M + G P L T+ +I G KEG +E
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 306 AKKLFAS--MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
A ++ M G PD F LC+ A V + ++ +G P+ T +L
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 249
Query: 364 VTGLASISKVAEANELIGLM 383
+ GL+ ++K+ EA +L+ M
Sbjct: 250 IDGLSKMAKMDEALQLLAKM 269
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 123/302 (40%), Gaps = 2/302 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S + L + + + +LLEE+ R ++ L GQ A E
Sbjct: 102 VTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRS-KEAFSLLE 160
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE-FPKVYGIEPNSETYNKVIKSFCE 194
+M G + ++ G E R+ E F G+ P+ T+N V+ C+
Sbjct: 161 QMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCK 220
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+++ + RPN + L+ G K K ++ ++L M + G +
Sbjct: 221 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 280
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y+ + L K+ R E+A +L M G P+ TY LI GF K L A L M
Sbjct: 281 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 340
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G P + + LC+ G ++ A+++ A+G P+ T S+V GL +V
Sbjct: 341 EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 400
Query: 375 EA 376
EA
Sbjct: 401 EA 402
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 139/351 (39%), Gaps = 40/351 (11%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV--LYGQANMIDH 129
P + + F + + L + A ++++E+ + +S++ L + ++D
Sbjct: 168 PPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILD- 226
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F+ + G R +V + L+ G +E ++ + ++ G N+ TY+ V+
Sbjct: 227 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL-GCRANTVTYSTVV 285
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ G +L +MR P+A + L+ GF+K + + +L+ M + G
Sbjct: 286 DGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH 345
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH----------------- 292
V Y LC+ R +EA +LD M +RG PN TY
Sbjct: 346 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 405
Query: 293 -------------------LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LI G K G ++ A + M G PD F + LC
Sbjct: 406 FEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLC 465
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G +T L++ R +G VP T +LV L S+V EA +L M+
Sbjct: 466 DAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMR 516
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 8/268 (2%)
Query: 127 IDHAMQTFEEM--DKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
I+ A + +EM + GL V N++L G + + +F + G PN T
Sbjct: 187 IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE-RGCRPNVVT 245
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y+ +I + +LA+M R N + ++ G K + ED VL+ M
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G YN I K +R EA LL ML G P++ TY L HG + G +
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV--PHFSTMKS 362
A ++ M GC P++ + LC+ G AL MA+ V PH +
Sbjct: 366 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE-KMARDEVVAPHVIAYSA 424
Query: 363 LVTGLASISKVAEANELIGLMKK--RFP 388
L+ GL K+ EA E + M + R P
Sbjct: 425 LIDGLCKAGKIDEAYEFLERMIRAGRIP 452
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 117/301 (38%), Gaps = 40/301 (13%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+ + A FEE G +V N ++ G E ++ + +G P
Sbjct: 41 GKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPT 100
Query: 182 SETYNKVIKSFCES-----------------------------------GDSSSVYSILA 206
TY+ +I C G S +S+L
Sbjct: 101 VVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLE 160
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ--MMEKCGIASGVNVYNIRIQSLCK 264
+M P FGL++ G KE + E +V+ M + G++ V +N + LCK
Sbjct: 161 QMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCK 220
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+R +A + L RG +PN+ TY LI G K ++ A +L A M GC ++
Sbjct: 221 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 280
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ L + G E A+ V R G +P T +L+ G ++ EA +GL++
Sbjct: 281 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA---VGLLR 337
Query: 385 K 385
+
Sbjct: 338 E 338
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 7/307 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQT 133
+ +S + LS+ + QLL ++ +L +S V+ G + ++ A+
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKM---VELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+M G N L+ G + E + E + G P+ TY + C
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA-GFHPSVVTYTTLCHGLC 359
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY-EDVGKVLQMMEKCGIASGV 252
SG IL M + PNA + ++ G K + E +G +M +A V
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHV 419
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y+ I LCK + +EA L+ M+ G P++ T+ LI+G G ++ +LF
Sbjct: 420 IAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRG 479
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M GC PD + LC+ + A + + + G P ST ++++ GL +++
Sbjct: 480 MAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNR 539
Query: 373 VAEANEL 379
+A +
Sbjct: 540 DEDAKRI 546
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 1/197 (0%)
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C+S ++ +M K+I P+ +G L+ G K+ + ++ + + G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
V YN I LCK R E A L D M + G +P + TY LI G ++ ++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
KL M GC P++ + L G + A + A G P T ++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 367 LASISKVAEANELIGLM 383
L ++ A ++ M
Sbjct: 181 LCKEGEIEAAFRVVDEM 197
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I LCK ++ ++A L M+ + I P++ TY LI G GK+ ++ A LF GC
Sbjct: 2 IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 61
Query: 319 EPDSYCFFMFTYFLCQGGEYETALKVC-RASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
P + LC+ G E AL + ++ G+ P T +L+ GL +V +
Sbjct: 62 HPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGC 121
Query: 378 ELIGLMKKR 386
+L+ M R
Sbjct: 122 KLLEEMAGR 130
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 2/320 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
A S ++ L ++ + + L +L L+ N I + ++ ++ A +E
Sbjct: 156 AISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKE 215
Query: 137 MDKYGLR-QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M K + ++ + L+ G S +E +F E I P++ TYN +I F
Sbjct: 216 MKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCW 275
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G I+ M+ PN ++ L++GF KE + E+ + M+ G+ Y
Sbjct: 276 GKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGY 335
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I I C+ R +EA ALL+ M K ++ T L+ GF EG E A + +++
Sbjct: 336 TILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSS 395
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
G + + + LCQ G+ + AL++ ++++G+VPH +T L+ GL +
Sbjct: 396 EGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADD 455
Query: 376 A-NELIGLMKKRFPKSGDMW 394
A L GL + F D W
Sbjct: 456 AVVALYGLAEMGFKPEQDSW 475
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 141/303 (46%), Gaps = 4/303 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+S + KL++A F A+ LL ++ + +E ++ + + +++ + ++ F +
Sbjct: 85 TYSTIIDKLARAKKFQAVDALLRQMMYE-TCKFHESLFLNLMKYFAKSSEFERVVEMFNK 143
Query: 137 MDKYGL-RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+ + S+ A++ L + SK + ++ + K + ++PN+ +N IK C+S
Sbjct: 144 IQPIVREKPSLKAISTCLNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKS 203
Query: 196 GDSSSVYSILAEMRRKSIR-PNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVN 253
GD S ++++ EM++ SI PN + L+ G + + ++ ++ +M+ K I
Sbjct: 204 GDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDAL 263
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN+ I + + AK +++ M S G PN+ Y L+ GF KEG LE A F M
Sbjct: 264 TYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEM 323
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G + D+ + + + C+ G + A+ + T+ L+ G +
Sbjct: 324 KIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRT 383
Query: 374 AEA 376
EA
Sbjct: 384 EEA 386
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 1/259 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S + L ++ +L EE+ ++ + + + I + +D A + E
Sbjct: 227 ITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIME 286
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G +V +AL+ G EE F E K++G++ ++ Y +I FC
Sbjct: 287 FMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEM-KIFGLKQDTVGYTILINYFCRF 345
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++L EM+ + + +LL GF E + E+ +L + GI Y
Sbjct: 346 GRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASY 405
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + SLC+ ++A LL LSRG P+ T L+ G K G + A +
Sbjct: 406 RIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAE 465
Query: 316 GGCEPDSYCFFMFTYFLCQ 334
G +P+ + + F+C+
Sbjct: 466 MGFKPEQDSWALLVEFVCR 484
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 1/193 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ AM FEEM +GL+Q L+ +E + E K + + T N
Sbjct: 313 LEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEM-KETKCKADIVTVN 371
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++ FC G + +L + + I N + ++L ++ + ++L +
Sbjct: 372 VLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSR 431
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G N + LCK +++A L G+ G KP D++ L+ +E L A
Sbjct: 432 GFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERKLLLA 491
Query: 307 KKLFASMTNGGCE 319
+L +T CE
Sbjct: 492 FELLDELTANECE 504
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 1/265 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q N A+ + MD +G +V N ++ G +++ +F K GI
Sbjct: 684 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK-KGIRA 742
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I SG + +L +M ++ I PN F L+ F KE + +
Sbjct: 743 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 802
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + + V YN I C +AK + D M+S+G P++ TY LI GF K
Sbjct: 803 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 862
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
+E KLF MT G D++ + + CQ G+ A KV + G P T
Sbjct: 863 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 922
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
L+ L + K+ +A ++ ++K
Sbjct: 923 NILLDCLCNNGKIEKALVMVEDLQK 947
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 1/248 (0%)
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
+M K G R S+ L +LL G ++E + +G PN YN VI C++
Sbjct: 664 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG-FGFVPNVVIYNTVINGLCKN 722
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
D ++ + M +K IR +A + L++G ++ D ++L+ M K I V +
Sbjct: 723 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 782
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
I + K EA+ L M+ R + PN+ TY LI+GF G L AK +F M +
Sbjct: 783 TALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVS 842
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
GC PD + C+ E +K+ +G V T +L+ G K+
Sbjct: 843 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNV 902
Query: 376 ANELIGLM 383
A ++ M
Sbjct: 903 AQKVFNRM 910
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 14/273 (5%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+ N+ A++ EM+K GL V N LL G S + + R+ + K I P+
Sbjct: 190 GELNI---ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK-RSINPD 245
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
T+ +I F + G+ + EM + S+ PN + ++ G + D K
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+M G V YN I CK + +E L M G ++ TY LIHG+ + G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL---KVCRASMAKGWVPHFS 358
L A +F M + PD + + LC GE E+AL R S + ++
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
M + GL KV +A EL R P G
Sbjct: 426 IM---IHGLCKADKVEKAWELFC----RLPVEG 451
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ +S LS + + ++LL ++ R + N F I + + + A
Sbjct: 743 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNL 801
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++EM + + +V N+L+ G + + K +F + G P+ TYN +I FC
Sbjct: 802 YKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFC 860
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S + EM + + +A + L+ G+ + K KV M CG++ +
Sbjct: 861 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 920
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI + LC + E+A +++ + + ++ TY +I G + L+ A LF S+
Sbjct: 921 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 980
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
T G +PD+ + LC+ G A K+CR G++P
Sbjct: 981 TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 1022
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G EP+ T+ ++ FC +S++ M + PN + L+ G K +
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L MEK G+ + V YN + LC R +A +L M+ R I P++ T+ LI
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+GNL+ A++L+ M +P++ + LC G A K +KG P+
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 357 FSTMKSLVTGLASISKVAEANELIGLM 383
T +L++G V E +L M
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 11/271 (4%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY---- 176
+ + + + A+ +M K G S+ +LL G L V RI F V
Sbjct: 116 FCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCL------VNRIGDAFSLVILMVK 169
Query: 177 -GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G EPN YN +I C++G+ + +L EM +K + + + LL G ++ D
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++L+ M K I V + I K +EA+ L M+ + PN TY +I+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G G L AKK F M + GC P+ + C+ + +K+ + +G+
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ G + K+ A ++ M R
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 8/267 (2%)
Query: 117 SIVLYGQ-------ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
SIV +G N I A M K G +V N L+ G + +
Sbjct: 140 SIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELL 199
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
E K G+ + TYN ++ C SG S +L +M ++SI P+ F L+ F K
Sbjct: 200 NEMEK-KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ ++ ++ + M + + YN I LC R +AK D M S+G PN+ T
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y LI GF K ++ KLF M+ G D + + + CQ G+ AL + +
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEA 376
++ P T L+ GL ++ A
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%)
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
S+ K+ F S +++ EM P+ DF LL +YE V Q
Sbjct: 36 SDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQ 95
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
ME GI+ + + I I C+ R A ++L M+ G +P++ T+ L+HGF
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A L M G EP+ + LC+ GE AL++ KG T
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
+L+TGL + ++A ++ M KR
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKR 240
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+S+ EM + P+ DF +L K +K++ V + ME GI+ + + I I
Sbjct: 589 FSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHC 648
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
C+ R A ALL M+ G +P++ T L++GF + + A L SM G P+
Sbjct: 649 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN 708
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ LC+ + AL+V KG T +L++GL++ + +A L+
Sbjct: 709 VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLR 768
Query: 382 LMKKR 386
M KR
Sbjct: 769 DMVKR 773
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 128/316 (40%), Gaps = 45/316 (14%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ ++ L + ++ +++L ++ R PD+ F V Q N+ D A
Sbjct: 210 DVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT---FTALIDVFVKQGNL-DEA 265
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ ++EM + + + N+++ G + + K+ F + G PN TYN +I
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLIS 324
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
FC+ F ++ G K+ Q M G +
Sbjct: 325 GFCK-------------------------FRMVDEGM----------KLFQRMSCEGFNA 349
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN I C++ + A + M+SR + P++ T+ L+HG G +E A F
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV-CRASMAKGWVPHFSTMKSLVTGLAS 369
M + + + LC+ + E A ++ CR + +G P T ++ GL
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPV-EGVKPDARTYTIMILGLCK 468
Query: 370 ISKVAEANELIGLMKK 385
EA+ELI MK+
Sbjct: 469 NGPRREADELIRRMKE 484
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y QA ++ A + F M G+ + N +LL C+ + E + E + ++
Sbjct: 894 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYN-ILLDCLCNNGKIEKALVMVEDLQKSEMDV 952
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I+ C + + + + RK ++P+A + +++G ++ + K+
Sbjct: 953 DIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLC 1012
Query: 241 QMMEKCGIASGVNVYN 256
+ M++ G +Y+
Sbjct: 1013 RRMKEDGFMPSERIYD 1028
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 4/266 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A E+ YG++ S N LL + +E +F E + Y + P
Sbjct: 154 YARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV-P 212
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ ++N +I+ C G+ + M P+ + L+ GF + ++ +L
Sbjct: 213 DVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL 272
Query: 241 Q--MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M+ K G++ V Y I CKL + A L D M+S GIKPN T+ LI GFG
Sbjct: 273 KEDMLIK-GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K GN+ A ++ M GC PD F C+ GE LK+ + P+
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391
Query: 359 TMKSLVTGLASISKVAEANELIGLMK 384
T L+ L +++ EA + +K
Sbjct: 392 TYAVLINALCKENRIREARNFLRHLK 417
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 113/288 (39%), Gaps = 35/288 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A + F+ M +G + + N L+ G + + E + G+ P+ TY
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK-------YE----- 234
+I +C+ GD + + EM I+PN F +L+ GF K YE
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349
Query: 235 --------------------DVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEA 271
+V + L++ E+ ++ V Y + I +LCK R EA
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ L + S + P Y +I GF K G ++ A + A M C PD F +
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
C G A+ + VP T+ SL++ L EA+++
Sbjct: 470 NCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 8/268 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKV--YGIE 179
+ N++D A+ F E + V + N L+ G C + E+ + F F + +G
Sbjct: 191 KQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG----EIDKAFEFFQNMGNFGCF 246
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ +YN +I FC + S + +L E M K + P+ + +++G+ K + +
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M GI +N+ I K+ A + + ML G P++ T+ LI G+
Sbjct: 307 LFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYC 366
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+EG + KL+ M P+ Y + + LC+ A R + VP
Sbjct: 367 REGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPF 426
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
++ G KV EAN ++ M+++
Sbjct: 427 IYNPVIDGFCKAGKVDEANFIVAEMQEK 454
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 10/241 (4%)
Query: 162 YEEVKRI--------FTEFPKVY-GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+E +KR F EF + + I TY+ ++++ C+ G + S + MR
Sbjct: 80 FEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDG 139
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
I P+++ LL++ + + K + L + GI VYN + L K +EA
Sbjct: 140 ILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAV 199
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L L P++ ++ LI G + G ++ A + F +M N GC PD +
Sbjct: 200 LLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 259
Query: 333 CQGGEYETALKVCRASM-AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
C+ E + + M KG P T S+++G + + A+EL M K
Sbjct: 260 CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 319
Query: 392 D 392
D
Sbjct: 320 D 320
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 117/278 (42%), Gaps = 1/278 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ ++ + N + LL+E + + + I Y + + A +
Sbjct: 248 DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASEL 307
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM G++ + N L+ G N ++ + + G P+ T+ +I +C
Sbjct: 308 FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM-LLLGCLPDVVTFTSLIDGYC 366
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G+ + + EM+ +++ PN + +L+ KE++ + L+ ++ +
Sbjct: 367 REGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPF 426
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I CK + +EA ++ M + +P+ T+ LI G +G + A F M
Sbjct: 427 IYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKM 486
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
C PD L + G A ++ +A++ K
Sbjct: 487 IEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 1/238 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+A TF +M YG +V++ NA L +L + ++ F + + I PN T N V
Sbjct: 164 NATDTFLQMKGYGFLPTVESCNAYL-SSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMV 222
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+++FC+SG + EM I PN T + L+ G+ ++ K+ M G+
Sbjct: 223 MRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGV 282
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ V +N I CK + EA + M + PN TY LI+G + GN E ++
Sbjct: 283 EANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRR 342
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L+ M+ G + D + LC+ G+ + A + + + VP+ ST +L++G
Sbjct: 343 LYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISG 400
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 119/266 (44%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ ++ ++ A+Q FEEM+ G+ + + N L++G ++ + G+E
Sbjct: 226 FCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSM-RAKGVEA 284
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T+N +I FC+ G + +EM+ ++ PN + L+ G + E ++
Sbjct: 285 NVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLY 344
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + G+ + + YN I LCK ++++A ++ + + PN T+ LI G
Sbjct: 345 EEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIR 404
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
N + A +L+ SM GC P+ F M C+ ++E A V + + P +
Sbjct: 405 NNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVL 464
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+ GL K A +L +K R
Sbjct: 465 SEIYHGLCCCGKEHLAMKLSSELKAR 490
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K YG P E+ N + S + + EMRR I PN +++ F K K
Sbjct: 173 KGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKL 232
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
E +V + ME GI+ YN I C+ A L + M ++G++ N+ T+ L
Sbjct: 233 EKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSL 292
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I GF KEG L A K+F+ M P++ + Q G E ++ G
Sbjct: 293 IDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGV 352
Query: 354 VPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ GL K +A ++ + K
Sbjct: 353 KADILTYNALILGLCKEGKTKKAAYMVKELDK 384
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 8/309 (2%)
Query: 66 SLAPESPLDRMAF-SIAVSKL--SQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG 122
SL P + + F ++A S L S ++S L + + L + ++ HV S+ +
Sbjct: 22 SLKPXTKGQDLDFVNVAHSHLIHSDWKKLTSLSTHLTPFRVKHILLKIQKDHVLSLEFFN 81
Query: 123 QA---NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV-KRIFTEFPKVYGI 178
N H ++T + + L+L +L K + ++ ++F Y +
Sbjct: 82 WVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRM 141
Query: 179 -EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ + ++ + K+ + +M+ P L+ H+ +
Sbjct: 142 CDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIAL 201
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M +C I+ V N+ +++ CK + E+A + + M S GI PN +Y LI G+
Sbjct: 202 AFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGY 261
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
++G L A KL SM G E + F C+ G+ A KV P+
Sbjct: 262 CRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNT 321
Query: 358 STMKSLVTG 366
T +L+ G
Sbjct: 322 ITYNTLING 330
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%)
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
K+ + M+ G V N + SL L R + A A M I PN+ T
Sbjct: 161 KFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRN 220
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
++ F K G LE A ++F M + G P+ + C+ G +A+K+ + AK
Sbjct: 221 MVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAK 280
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G + T SL+ G K+ EA+++ MK
Sbjct: 281 GVEANVVTFNSLIDGFCKEGKLHEASKVFSEMK 313
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 115 VHSIVLYGQANMIDHAM--QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
++ ++ G + M + M + +EEM + G++ + NAL+LG ++ + E
Sbjct: 323 TYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKEL 382
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
K + PN+ T++ +I C +S + + M R PN F +L++ F K
Sbjct: 383 DK-ENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNED 441
Query: 233 YEDVGKVL-QMMEKCGIASGVNVYNIRIQSLC-------KLKRSEEAKALLDGMLSRGIK 284
+E VL +M E+C G +V + LC +K S E KA M+++G +
Sbjct: 442 FEGAFLVLMEMFERC-FTPGSDVLSEIYHGLCCCGKEHLAMKLSSELKA--RHMMTKGFE 498
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 4/266 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + +D A E+ YG++ S N LL + +E +F E + Y + P
Sbjct: 154 YARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFV-P 212
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ ++N +I+ C G+ + M P+ + L+ GF + ++ +L
Sbjct: 213 DVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLL 272
Query: 241 Q--MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M+ K G++ V Y I CKL + A L D M+S GIKPN T+ LI GFG
Sbjct: 273 KEDMLIK-GVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFG 331
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K GN+ A ++ M GC PD F C+ GE LK+ + P+
Sbjct: 332 KVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVY 391
Query: 359 TMKSLVTGLASISKVAEANELIGLMK 384
T L+ L +++ EA + +K
Sbjct: 392 TYAVLINALCKENRIREARNFLRHLK 417
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 113/288 (39%), Gaps = 35/288 (12%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID A + F+ M +G + + N L+ G + + E + G+ P+ TY
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK-------YE----- 234
+I +C+ GD + + EM I+PN F +L+ GF K YE
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349
Query: 235 --------------------DVGKVLQMMEKC---GIASGVNVYNIRIQSLCKLKRSEEA 271
+V + L++ E+ ++ V Y + I +LCK R EA
Sbjct: 350 GCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREA 409
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ L + S + P Y +I GF K G ++ A + A M C PD F +
Sbjct: 410 RNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG 469
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
C G A+ + VP T+ SL++ L EA+++
Sbjct: 470 NCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQI 517
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 8/268 (2%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKV--YGIE 179
+ N++D A+ F E + V + N L+ G C + E+ + F F + +G
Sbjct: 191 KQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIG----EIDKAFEFFQNMGNFGCF 246
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAE-MRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ +YN +I FC + S + +L E M K + P+ + +++G+ K + +
Sbjct: 247 PDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASE 306
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M GI +N+ I K+ A + + ML G P++ T+ LI G+
Sbjct: 307 LFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYC 366
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
+EG + KL+ M P+ Y + + LC+ A R + VP
Sbjct: 367 REGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPF 426
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
++ G KV EAN ++ M+++
Sbjct: 427 IYNPVIDGFCKAGKVDEANFIVAEMQEK 454
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 10/241 (4%)
Query: 162 YEEVKRI--------FTEFPKVY-GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+E +KR F EF + + I TY+ ++++ C+ G + S + MR
Sbjct: 80 FEVIKRFSDPLLGLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDG 139
Query: 213 IRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
I P+++ LL++ + + K + L + GI VYN + L K +EA
Sbjct: 140 ILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAV 199
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
L L P++ ++ LI G + G ++ A + F +M N GC PD +
Sbjct: 200 LLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGF 259
Query: 333 CQGGEYETALKVCRASM-AKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
C+ E + + M KG P T S+++G + + A+EL M K
Sbjct: 260 CRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPN 319
Query: 392 D 392
D
Sbjct: 320 D 320
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 117/278 (42%), Gaps = 1/278 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D ++++ ++ + N + LL+E + + + I Y + + A +
Sbjct: 248 DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASEL 307
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM G++ + N L+ G N ++ + + G P+ T+ +I +C
Sbjct: 308 FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKM-LLLGCLPDVVTFTSLIDGYC 366
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G+ + + EM+ +++ PN + +L+ KE++ + L+ ++ +
Sbjct: 367 REGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPF 426
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+YN I CK + +EA ++ M + +P+ T+ LI G +G + A F M
Sbjct: 427 IYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKM 486
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
C PD L + G A ++ +A++ K
Sbjct: 487 IEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQK 524
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 1/234 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + E +F E K+ G P ETY +I FC+ GD ++ +L EM
Sbjct: 224 NTLIDGYCKKGDMEMANGLFIEL-KLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMN 282
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+ + N + ++ YK + ++ M +CG + YN I C+ +
Sbjct: 283 SRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVS 342
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA LL+ L +G+ PN +Y LIH + K+G + A MT G +PD +
Sbjct: 343 EADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALV 402
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ L GE + AL + + +G P L++GL K+ A L+ M
Sbjct: 403 HGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM 456
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 2/290 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
+ ++ + F AI +LL E+ +R L N + + I + I A++T E
Sbjct: 257 TYGAIINGFCKKGDFKAIDRLLMEMNSR-GLTVNVQVYNTIIDARYKHGHIVKAVETIEG 315
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M + G + + N L+ G E ++ E G+ PN +Y +I ++C+ G
Sbjct: 316 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLL-EQALGKGLMPNKFSYTPLIHAYCKQG 374
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+ L EM + +P+ +G L+ G + + + + M + G+ +YN
Sbjct: 375 GYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYN 434
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I + LCK + AK LL ML + + P+ Y L+ GF + GNL+ A+KLF
Sbjct: 435 ILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEK 494
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
G P + C+ G + A+ + P T +++ G
Sbjct: 495 GMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDG 544
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 6/250 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ +S + + QLLE+ + L N+ + I Y + D A
Sbjct: 324 DIVTYNTLISGSCRDGKVSEADQLLEQALGK-GLMPNKFSYTPLIHAYCKQGGYDRASNW 382
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVIKS 191
EM + G + + AL+ G +++ EV T K+ G+ P++ YN ++
Sbjct: 383 LIEMTERGHKPDLVTYGALVHGLVVAG---EVDVALTIREKMLERGVFPDAGIYNILMSG 439
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C+ + +LAEM +S+ P+A + L+ GF + ++ K+ ++ + G+ G
Sbjct: 440 LCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 499
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
+ YN I+ CK ++A A ++ M R + P+ TY +I G+ K+ +L+GA+K+F
Sbjct: 500 IVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFR 559
Query: 312 SMTNGGCEPD 321
M C+P+
Sbjct: 560 EMVKMKCKPN 569
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TYN +I C G S +L + K + PN + L+ + K+ Y+
Sbjct: 320 GCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRA 379
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
L M + G + Y + L + A + + ML RG+ P+ Y L+ G
Sbjct: 380 SNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSG 439
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K+ L AK L A M + PD++ + + G + A K+ ++ KG P
Sbjct: 440 LCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 499
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+++ G + +A I MKKR
Sbjct: 500 IVGYNAMIKGYCKFGMMKDAMACINRMKKR 529
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 118/305 (38%), Gaps = 56/305 (18%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P++ A+S + L+++ F+ + +LE ++ E + I Y + +++ A+
Sbjct: 91 PINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSI-VIQAYSDSGLVEKAL 149
Query: 132 QTFEEMDK-YGLRQSVDALNALL-----LG---------CILSKNY-----EEVKRIFTE 171
+ + + K Y V A N+LL LG CI+ K E R E
Sbjct: 150 ELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIE 209
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G PN YN +I +C+ GD + E++ K P +G ++ GF K+
Sbjct: 210 DRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKG 269
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
++ + ++L M SRG+ N+ Y
Sbjct: 270 DFKAIDRLLMEMN-----------------------------------SRGLTVNVQVYN 294
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
+I K G++ A + M GC+PD + C+ G+ A ++ ++ K
Sbjct: 295 TIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK 354
Query: 352 GWVPH 356
G +P+
Sbjct: 355 GLMPN 359
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 62/269 (23%)
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA----------TDFGLL---LAGF 227
N Y+ ++K S S + +L MR + + P +D GL+ L +
Sbjct: 93 NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152
Query: 228 Y---KEHKY-EDV---GKVLQMMEKCG-IASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
Y K + Y DV +L M+ K G I I ++ LCK + EE + L++
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRW 212
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+G PN+ Y LI G+ K+G++E A LF + G P + C+ G+++
Sbjct: 213 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 272
Query: 340 T-----------------------------------ALKVCRASMAKGWVPHFSTMKSLV 364
A++ + G P T +L+
Sbjct: 273 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 332
Query: 365 TGLASISKVAEANELI------GLMKKRF 387
+G KV+EA++L+ GLM +F
Sbjct: 333 SGSCRDGKVSEADQLLEQALGKGLMPNKF 361
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 1/258 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M++ A+Q F +M ++ + + N LL ++VKR F + G P TY
Sbjct: 75 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFTY 133
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I C+ GD + + EM+ + + P+ + ++ GF K + +D + M+
Sbjct: 134 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 193
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
V YN I CK + M G+KPN+ +Y L+ F KEG ++
Sbjct: 194 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 253
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A K + M G P+ Y + C+ G A ++ + G + T +L+
Sbjct: 254 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 313
Query: 366 GLASISKVAEANELIGLM 383
GL ++ EA EL G M
Sbjct: 314 GLCDAERMKEAEELFGKM 331
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 2/265 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++I + + + A L EE+K R L + + I +G+ +D + FEE
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRG-LVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 190
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M V NAL+ C + F K G++PN +Y+ ++ +FC+ G
Sbjct: 191 MKDMCCEPDVITYNALI-NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 249
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+MRR + PN + L+ K D ++ M + G+ V Y
Sbjct: 250 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 309
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I LC +R +EA+ L M + G+ PNL +Y LIHGF K N++ A +L +
Sbjct: 310 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 369
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETA 341
G +PD + F + LC + E A
Sbjct: 370 GIKPDLLLYGTFIWGLCSLEKIEAA 394
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A FEEM GL N+++ G ++ F E K EP+ TYN
Sbjct: 146 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYN 204
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ G EM+ ++PN + L+ F KE + K M +
Sbjct: 205 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV 264
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ Y I + CK+ +A L + ML G++ N+ TY LI G ++ A
Sbjct: 265 GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA 324
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++LF M G P+ + + + + AL++ +G P + + G
Sbjct: 325 EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 384
Query: 367 LASISKVAEANELIGLMKK 385
L S+ K+ A ++ MK+
Sbjct: 385 LCSLEKIEAAKVVMNEMKE 403
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 77/185 (41%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P ++ + + G ++M+R + P LL F K K +DV +
Sbjct: 58 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M G V YNI I +CK E A+ L + M RG+ P+ TY +I GFGK
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G L+ F M + CEPD + C+ G+ L+ R G P+ +
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 360 MKSLV 364
+LV
Sbjct: 238 YSTLV 242
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D + F++M G R +V N +++ C+ + E R E K G+ P++ TYN
Sbjct: 112 DDVKRFFKDMIGAGARPTVFTYN-IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNS 170
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I F + G EM+ P+ + L+ F K K + + M+ G
Sbjct: 171 MIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNG 230
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V Y+ + + CK ++A M G+ PN TY LI K GNL A
Sbjct: 231 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 290
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+L M G E + + LC + A ++ G +P+ ++ +L+ G
Sbjct: 291 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 350
Query: 368 ASISKVAEANELIGLMKKR 386
+ A EL+ +K R
Sbjct: 351 VKAKNMDRALELLNELKGR 369
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
++ + EM GL+ +V + + L+ ++ + + + +V G+ PN TY +I
Sbjct: 219 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLI 277
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ G+ S + + EM + + N + L+ G + ++ ++ M+ G+
Sbjct: 278 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 337
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I K K + A LL+ + RGIKP+L Y I G +E AK +
Sbjct: 338 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 397
Query: 310 FASMTNGGCEPDS--YCFFMFTYF 331
M G + +S Y M YF
Sbjct: 398 MNEMKECGIKANSLIYTTLMDAYF 421
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 2/267 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + M+ A++ + +M + GL + +L+ N + R+ E +V G+E
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-GVEW 303
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I C++ + +M + PN + L+ GF K + ++L
Sbjct: 304 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 363
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++ GI + +Y I LC L++ E AK +++ M GIK N Y L+ + K
Sbjct: 364 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 423
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK-VCRASMAKGWVPHFST 359
GN L M E F + LC+ A+ R S G + +
Sbjct: 424 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 483
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+++ GL ++V A L M ++
Sbjct: 484 FTAMIDGLCKDNQVEAATTLFEQMVQK 510
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 14/290 (4%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H V +A +D A++ E+ G++ + + G + E K + E K
Sbjct: 347 IHGFV---KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-K 402
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
GI+ NS Y ++ ++ +SG+ + +L EM+ I F +L+ G K
Sbjct: 403 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL-- 460
Query: 235 DVGKVLQMMEKC----GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
V K + + G+ + ++ I LCK + E A L + M+ +G+ P+ Y
Sbjct: 461 -VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 519
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
L+ G K+GN+ A L M G + D + + L + + A +
Sbjct: 520 TSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 579
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAALP 399
+G P S++ + + EA EL LMK + S + + ALP
Sbjct: 580 EGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDN--DNALP 627
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A M K G+ +V +L+ G L K + K +F + G+ PN +Y+
Sbjct: 280 VKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTI-SLRGVTPNVHSYS 338
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++ + EM K++ PN + L+ G K + DV ++ +
Sbjct: 339 VMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNR 398
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + + YN + LCK + ++A ALL M GI+P++ TY L+ G K G L+ A
Sbjct: 399 GQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDA 458
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++++ + G + + + LC+ G ++ AL + G +P T ++L++
Sbjct: 459 QRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISA 518
Query: 367 LASISKVAEANELIGLMKKR 386
L +K +A +L+ M R
Sbjct: 519 LFKNNKNGKAVKLLREMIAR 538
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ Y +I SFC+ Y + +EM K I PN F L+ GF + ++
Sbjct: 190 VRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV 249
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L M + V +NI I LCK ++A ++L M+ +G++PN+ TY L+ G+
Sbjct: 250 GLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY 309
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ AK +F +++ G P+ + + + LC+ + A+K+ + K P+
Sbjct: 310 FLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ GL ++++ +LI + R
Sbjct: 370 VTYSSLIDGLCKSGRISDVWDLIDEINNR 398
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 112/270 (41%), Gaps = 36/270 (13%)
Query: 153 LLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS 212
+L ++ N+ ++ F++ ++ GI+P T+N +I F + +S++A++ +
Sbjct: 59 ILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLG 118
Query: 213 IRPNATDFGLLLAGF-----------YKEH---------------------KYEDVGKVL 240
+P+ LL G + +H K + L
Sbjct: 119 YQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAAL 178
Query: 241 QMMEKCG----IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
Q++ K + V +Y I S CK K +A L M+ + I PN+ T+ LI+G
Sbjct: 179 QLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYG 238
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F G L+ A L M+ P+ Y F + LC+ GE + A V + +G P+
Sbjct: 239 FCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPN 298
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ G + +V +A + + R
Sbjct: 299 VVTYTSLMDGYFLVKEVNKAKHVFNTISLR 328
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 9/204 (4%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK----EHKYEDVGKVL 240
+NK++ S + S +M K I+P F +L+ F + V K+L
Sbjct: 56 FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
K G N ++ LC + +EA D ++ + + +Y LI+G K
Sbjct: 116 ----KLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKS 171
Query: 301 GNLEGAKKLFASMTN-GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G A +L + PD + C+ A + + K P+ T
Sbjct: 172 GETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVT 231
Query: 360 MKSLVTGLASISKVAEANELIGLM 383
SL+ G + ++ EA L+ M
Sbjct: 232 FNSLIYGFCIVGQLKEAVGLLNEM 255
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 136/297 (45%), Gaps = 2/297 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD++++ ++ L + A QLL + + ++ N + I + ++ A
Sbjct: 171 LDQVSYGTLINGLCKVGETRAALQLLRRVDGKL-VQLNAVMYNTVIDGMSKDKHVNDAFD 229
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+ EM + V +AL+ G + ++ +F + + I+P+ T+N ++ F
Sbjct: 230 LYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMI-LENIKPDVYTFNILVDGF 288
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G ++L M + I+PN + F L+ GF K+ K ++ V MM K GI V
Sbjct: 289 CKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNV 348
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
Y + C +K+ +AK + + M RG+ N+ +Y +I+GF K ++ A KLF
Sbjct: 349 VTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIE 408
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M + PD + LC+ G+ A ++ +G P+ T S++ L +
Sbjct: 409 MHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLT 465
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I P+ TY+ +I+ F G + +M ++I+P+ F +L+ GF KE + +
Sbjct: 239 ISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAK 298
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
VL MM I V+ +N + CK ++ +E K + M+ +GIKPN+ TY L+ G+
Sbjct: 299 NVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 358
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ AKK+F +M+ G + + + + C+ + + A+K+ K +P
Sbjct: 359 CLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDV 418
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T SL+ GL K++ A +L+ M R
Sbjct: 419 VTYNSLIDGLCKSGKISYAFQLVNEMHDR 447
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 143/325 (44%), Gaps = 9/325 (2%)
Query: 66 SLAPESP-LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YG 122
SL ++P L F+ + L ++ H++ + L ++++ N F +I++ +
Sbjct: 58 SLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEG---INPNFVTFNILINCFC 114
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPN 181
Q +I A ++ K G + LN + G C+ + ++ + F + G +
Sbjct: 115 QLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN--FHDKLVALGFHLD 172
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+Y +I C+ G++ + +L + K ++ NA + ++ G K+ D +
Sbjct: 173 QVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYS 232
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M I+ V Y+ I+ + + ++A L + M+ IKP++ T+ L+ GF KEG
Sbjct: 233 EMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEG 292
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
L+ AK + M +P+ F C+ + + V M +G P+ T
Sbjct: 293 RLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYC 352
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
SL+ G + +V +A ++ M +R
Sbjct: 353 SLMDGYCLVKQVNKAKKIFNTMSQR 377
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 13/181 (7%)
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F M K G++ +V +L+ G L K + K+IF + G+ N +YN +I F
Sbjct: 335 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQ-RGVTANVHSYNIMINGF 393
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + EM K I P+ + L+ G K K +++ M G +
Sbjct: 394 CKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNI 453
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN ALL + +GI+PN+ T LI G + G LE A+K+F
Sbjct: 454 ITYN------------SILNALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFED 501
Query: 313 M 313
+
Sbjct: 502 L 502
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 1/202 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++ N Y+ + +F S D S+ + ++ A +F +L K Y V
Sbjct: 30 LQKNFIPYSSISTTF-HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVL 88
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ Q ME GI +NI I C+L A ++L +L G +P++ T I GF
Sbjct: 89 SLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGF 148
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+G + A + G D + LC+ GE AL++ R K +
Sbjct: 149 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNA 208
Query: 358 STMKSLVTGLASISKVAEANEL 379
+++ G++ V +A +L
Sbjct: 209 VMYNTVIDGMSKDKHVNDAFDL 230
>gi|326517739|dbj|BAK03788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 430
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 158/361 (43%), Gaps = 27/361 (7%)
Query: 43 RATIARL----KSESNPFRILDICCGASLAPESP---LDRMAFSIAVSKLSQANHFNAIS 95
RA+I L ++E++P R+ + A +P+ R FS+A S+L + + +
Sbjct: 47 RASIIDLQLAVRAETDPDRVHSLVASALSSPDYHRLHTSRALFSLAASRLDRLRRPDLAA 106
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
LL++L + ++ L+ + A + + + S L G
Sbjct: 107 SLLDQLLASAPVSPG--LLARALSLFPGPDDAVRAFSSSAPAARSDVSLSALLSALLRAG 164
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR- 214
I +++K F G+ P S ++N ++ + +S D + +L EM +K +
Sbjct: 165 RI-----DDLKSTFKSAESSLGVAPGSASHNVLLHTLVKSSDLPAARKLLNEMAKKKFKH 219
Query: 215 ---PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
P+ + LLAGF ++ E+ K+L+ + + + V YN R+ + + +
Sbjct: 220 RPPPDIISYNTLLAGFSEQDDVEEFEKLLKEINENKLEPNVVTYNCRMHWFARKGETFKG 279
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM---------TNGGCEPDS 322
+ LLD M S+G+ PN TY L+ G+ KEGN+ A ++F M ++ G S
Sbjct: 280 EELLDVMESKGVLPNYVTYNALVQGYCKEGNVGAAMRVFKRMKVMKRREGRSDLGVSVHS 339
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + L + + AL +C + A P F +K LV GL + AEA ++
Sbjct: 340 QTYVLLFRTLVEKERLDDALWLCNSCFAMKAAPSFEAVKGLVEGLVKGGRSAEAKAVVAK 399
Query: 383 M 383
M
Sbjct: 400 M 400
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 4/271 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+HS V G+ + A F+ + K+GLR SV + N L+ G I + E R+ +
Sbjct: 143 MHSFVKEGEIRL---AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM-Q 198
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G++P+ TY+ +I C+ + EM K + PN F L+ G K + +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
++ + M ++ + YN I LCK ++A+ L+D M+ +G+KP+ TY LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G KEG+LE A + M D + LCQ G A K+ R ++ G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T ++ V ++L+ M++
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQR 409
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 135/309 (43%), Gaps = 7/309 (2%)
Query: 58 ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
++ C + PE+ + I VS+ + + + +LE T+ LR +
Sbjct: 19 MIHFLCTHQMLPEA---KTLIQIVVSRKGKGSASAVFAAILE---TKGTLRSDIYVFSGL 72
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I Y ++ + A++ + ++ R D +L + K ++ V + E + G
Sbjct: 73 ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLEC-G 131
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ +N ++ SF + G+ S+ + + +RP+ F L+ G+ K +
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ M+ G+ V Y++ I LCK + ++A L D ML +G+ PN T+ LI G
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G ++ A +++ M + PD + Y LC+ G+ + A + + KG P
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311
Query: 358 STMKSLVTG 366
T +L+ G
Sbjct: 312 FTYTTLIDG 320
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYG 141
KL N + ++ +PD+ + +S+++ G + + +D A F+EM G
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDV------YTYSVLINGLCKESKMDDANVLFDEMLDKG 236
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
L + L+ G + + I+ + + P+ TYN +I C+ GD
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS-QSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
++ EM K ++P+ + L+ G KE E + + M K I Y I
Sbjct: 296 QDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISG 355
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LC+ RS +A+ +L MLS G+KP + TY +I+ F K+G++ KL M G +P
Sbjct: 356 LCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ F KE + V + K G+ V +N + KL E L + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G++P++ TY LI+G KE ++ A LF M + G P+ F C+ G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
A+++ + +++ P T +L+ GL + +A +LI M
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 36/235 (15%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF-GLLLA----GFY------ 228
P ++T +++ S G +S+V++ + E + ++R + F GL+ A GF
Sbjct: 30 PEAKTLIQIVVSRKGKGSASAVFAAILE-TKGTLRSDIYVFSGLITAYLESGFLRDAIEC 88
Query: 229 ----KEHKY----EDVGKVLQMMEK----------------CGIASGVNVYNIRIQSLCK 264
KEHK+ + KVL+ + K CG + + +NI + S K
Sbjct: 89 YRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVK 148
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
A+++ D + G++P++ ++ L++G+ K G+L +L +M G +PD Y
Sbjct: 149 EGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + LC+ + + A + + KG VP+ T +L+ G +V A E+
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 1/258 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
M++ A+Q F +M ++ + + N LL ++VKR F + G P TY
Sbjct: 207 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA-GARPTVFTY 265
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N +I C+ GD + + EM+ + + P+ + ++ GF K + +D + M+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
V YN I CK + M G+KPN+ +Y L+ F KEG ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A K + M G P+ Y + C+ G A ++ + G + T +L+
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 366 GLASISKVAEANELIGLM 383
GL ++ EA EL G M
Sbjct: 446 GLCDAERMKEAEELFGKM 463
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 2/265 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
++I + + + A L EE+K R L + + I +G+ +D + FEE
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFR-GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEE 322
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M V NAL+ C + F K G++PN +Y+ ++ +FC+ G
Sbjct: 323 MKDMCCEPDVITYNALI-NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
+MRR + PN + L+ K D ++ M + G+ V Y
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I LC +R +EA+ L M + G+ PNL +Y LIHGF K N++ A +L +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETA 341
G +PD + F + LC + E A
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAA 526
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 11/264 (4%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRI-----FTEFPKVYGIEPN 181
++ A FEEM GL N+++ G + +V R+ F E K EP+
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDG------FGKVGRLDDTVCFFEEMKDMCCEPD 331
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I FC+ G EM+ ++PN + L+ F KE + K
Sbjct: 332 VITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYV 391
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + G+ Y I + CK+ +A L + ML G++ N+ TY LI G
Sbjct: 392 DMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAE 451
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ A++LF M G P+ + + + + AL++ +G P
Sbjct: 452 RMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
+ + GL S+ K+ A ++ MK+
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKE 535
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 80/197 (40%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P ++ + + G ++M+R + P LL F K K +DV +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M G V YNI I +CK E A+ L + M RG+ P+ TY +I GFGK
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G L+ F M + CEPD + C+ G+ L+ R G P+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 360 MKSLVTGLASISKVAEA 376
+LV + +A
Sbjct: 370 YSTLVDAFCKEGMMQQA 386
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 1/266 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + D + F++M G R +V N +++ C+ + E R E K G+ P
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYN-IMIDCMCKEGDVEAARGLFEEMKFRGLVP 295
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN +I F + G EM+ P+ + L+ F K K +
Sbjct: 296 DTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFY 355
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M+ G+ V Y+ + + CK ++A M G+ PN TY LI K
Sbjct: 356 REMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKI 415
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GNL A +L M G E + + LC + A ++ G +P+ ++
Sbjct: 416 GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASY 475
Query: 361 KSLVTGLASISKVAEANELIGLMKKR 386
+L+ G + A EL+ +K R
Sbjct: 476 NALIHGFVKAKNMDRALELLNELKGR 501
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
++ + EM GL+ +V + + L+ ++ + + + +V G+ PN TY +I
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRV-GLVPNEYTYTSLI 409
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C+ G+ S + + EM + + N + L+ G + ++ ++ M+ G+
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI 469
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I K K + A LL+ + RGIKP+L Y I G +E AK +
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 310 FASMTNGGCEPDS--YCFFMFTYF 331
M G + +S Y M YF
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYF 553
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 2/267 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + M+ A++ + +M + GL + +L+ N + R+ E +V G+E
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV-GVEW 435
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I C++ + +M + PN + L+ GF K + ++L
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++ GI + +Y I LC L++ E AK +++ M GIK N Y L+ + K
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVC-RASMAKGWVPHFST 359
GN L M E F + LC+ A+ R S G + +
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
+++ GL ++V A L M ++
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQK 642
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 14/290 (4%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H V +A +D A++ E+ G++ + + G + E K + E K
Sbjct: 479 IHGFV---KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-K 534
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
GI+ NS Y ++ ++ +SG+ + +L EM+ I F +L+ G K
Sbjct: 535 ECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKL-- 592
Query: 235 DVGKVLQMMEKC----GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
V K + + G+ + ++ I LCK + E A L + M+ +G+ P+ Y
Sbjct: 593 -VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Query: 291 KHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
L+ G K+GN+ A L M G + D + + L + + A +
Sbjct: 652 TSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 711
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAALP 399
+G P S++ + + EA EL LMK + S + + ALP
Sbjct: 712 EGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDN--DNALP 759
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A+ +M K G++ L+ G +E +F E + PN+ T+
Sbjct: 137 IHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM-PNTVTFT 195
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+ G S + M K + PN + L+ G+ + D KV ++M
Sbjct: 196 ILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGK 255
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G A V+ Y+I I CK +R +EAKALL M + + PN TY L+ G +L A
Sbjct: 256 GCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEA 315
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++LF M + G P+ + + LC+ G E ALK+ + + P L+ G
Sbjct: 316 QELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQG 375
Query: 367 LASISKVAEANEL 379
+ K+ A EL
Sbjct: 376 MFIAGKLEVAKEL 388
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 133/313 (42%), Gaps = 2/313 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + F+ ++ L +L E+ R + F + VL + M+ A
Sbjct: 155 DSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKG-MVSEARCV 213
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FE M + G+ ++ NAL+ G L + ++F E G P+ +Y+ +I +C
Sbjct: 214 FETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVF-EIMVGKGCAPSVHSYSILINGYC 272
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S ++L +M K + PN + L+ G + ++ + M G+ +
Sbjct: 273 KSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLR 332
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I + LCK EEA LL M R ++P++ Y LI G G LE AK+LF+ +
Sbjct: 333 TYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKL 392
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G P + + L + G + A K+ R G++P + ++ G
Sbjct: 393 FANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDP 452
Query: 374 AEANELIGLMKKR 386
+ A +LI M R
Sbjct: 453 STAIQLIDEMVGR 465
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 115/269 (42%), Gaps = 5/269 (1%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
ID AM +F M R S L L K Y V + + ++G+ N T N
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQM-DLFGVAHNDYTLN 125
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C S+L++M + I+P++ F L+ G E + ++ ++ M
Sbjct: 126 ILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ I + LCK EA+ + + M +G++PN+ TY L++G+ + A
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+F M GC P + + + C+ + A + K +P+ T +L+ G
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305
Query: 367 LASISKVAEANELIGLMKKRFPKSGDMWN 395
L S + EA EL K+ SG + N
Sbjct: 306 LCHASSLLEAQELF----KKMCSSGMLPN 330
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 1/238 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A + FE M G SV + + L+ G S+ +E K + T+ + I PN+ TYN
Sbjct: 242 MNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELI-PNTVTYN 300
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+++ C + + +M + PN + +LL G K E+ K+L M++
Sbjct: 301 TLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQER 360
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ + +YNI IQ + + E AK L + + GI+P++ TY +I G KEG + A
Sbjct: 361 KLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEA 420
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
KLF M + G PDS + + Q + TA+++ + + + ST K L+
Sbjct: 421 YKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 4/271 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+HS V G+ + A F+ + K+GLR SV + N L+ G I + E R+ +
Sbjct: 143 MHSFVKEGEIRL---AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAM-Q 198
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G++P+ TY+ +I C+ + EM K + PN F L+ G K + +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
++ + M ++ + YN I LCK ++A+ L+D M+ +G+KP+ TY LI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G KEG+LE A + M D + LCQ G A K+ R ++ G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P T ++ V ++L+ M++
Sbjct: 379 PEIGTYTMIINEFCKKGDVWXGSKLLKEMQR 409
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 135/311 (43%), Gaps = 11/311 (3%)
Query: 58 ILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
++ C + PE+ + I VS+ + + + +LE T Q +V S
Sbjct: 19 MIHFLCTHQMLPEA---KTLIQIVVSRKGKGSASAVFAAILETKGT-----QRSDIYVFS 70
Query: 118 --IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV 175
I Y ++ + A++ + ++ R D +L + K ++ V + E +
Sbjct: 71 GLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLEC 130
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G + +N ++ SF + G+ S+ + + +RP+ F L+ G+ K +
Sbjct: 131 -GYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNE 189
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ M+ G+ V Y++ I LCK + ++A L D ML +G+ PN T+ LI
Sbjct: 190 GFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLID 249
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
G K G ++ A +++ M + PD + Y LC+ G+ + A + + KG P
Sbjct: 250 GHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKP 309
Query: 356 HFSTMKSLVTG 366
T +L+ G
Sbjct: 310 DKFTYTTLIDG 320
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 84 KLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYG 141
KL N + ++ +PD+ + +S+++ G + + +D A F+EM G
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDV------YTYSVLINGLCKESKMDDANVLFDEMLDKG 236
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
L + L+ G + + I+ + + P+ TYN +I C+ GD
Sbjct: 237 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS-QSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
++ EM K ++P+ + L+ G KE E + + M K I Y I
Sbjct: 296 QDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISG 355
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LC+ RS +A+ +L MLS G+KP + TY +I+ F K+G++ KL M G +P
Sbjct: 356 LCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKP 414
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ F KE + V + K G+ V +N + KL E L + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G++P++ TY LI+G KE ++ A LF M + G P+ F C+ G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
A+++ + +++ P T +L+ GL + +A +LI M
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
L+ GFY+E+ +CG + + +NI + S K A+++ D + G
Sbjct: 119 LVWGFYEENL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWG 166
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
++P++ ++ L++G+ K G+L +L +M G +PD Y + + LC+ + + A
Sbjct: 167 LRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDAN 226
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ + KG VP+ T +L+ G +V A E+
Sbjct: 227 VLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEI 263
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 1/280 (0%)
Query: 101 LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
+ T P N I +Y + M+ HA+ TF M G + SV N ++ + +
Sbjct: 95 MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNC 154
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
V F + + PN ++N +I C G +IL M R P +
Sbjct: 155 RAHLVWXFFKQML-TSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSY 213
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
LL+ K+ +++ ++ ME GI + V YN+ I SLC+ RS + +L M +
Sbjct: 214 NTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRN 273
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+ I PN +Y LI+GF KEG + A ++F M P+ + + C G +E
Sbjct: 274 KMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEE 333
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
AL++ A P+ T+ +L+ GL +K A ++
Sbjct: 334 ALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNIL 373
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 1/231 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N L+ G + R+F E ++ + PN TYN +I +C +G+ +L M
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIEL-NLSPNLITYNILINGYCINGNFEEALRLLDVME 342
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+RPN G LL G YK K++ +L+ + + + I LC+ +
Sbjct: 343 ANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLD 402
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA LL M G+ P++ T+ LI+GF K GNL AK++ + + G P++ F
Sbjct: 403 EAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLI 462
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
Y C+ G +K A G T SLV L K+ EA E +
Sbjct: 463 YNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFL 513
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 133/328 (40%), Gaps = 11/328 (3%)
Query: 56 FRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV 115
F++L C + P D + FS+ ++ + + N +++ ++ + N F
Sbjct: 405 FQLLIEMCKDGVYP----DIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIF-- 458
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
S ++Y + + M+ + M+ G N+L+ + E +
Sbjct: 459 -STLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHIS 517
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
++ G+ PNS T++ +I + GD S +S+ +M P+ +G LL K +
Sbjct: 518 RI-GLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNF 576
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
+ K+L+ + +A YN I + K EA L + M+ I P+ TY +
Sbjct: 577 WEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCI 636
Query: 294 IHGFGKEGNLEGAKKLFAS-MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+ G +EG L A M +S + F L + G+ + AL + + KG
Sbjct: 637 LSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKG 696
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELI 380
+ S+ G + + KV A+ LI
Sbjct: 697 LSLDLIALNSITDGYSRMGKVFSASSLI 724
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 10/238 (4%)
Query: 145 SVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVY 202
+VD + N L++ S N E R+F E + I P+S TY ++ G +
Sbjct: 592 AVDTISYNTLIVEISKSGNLLEAVRLFEEMIQ-NNILPDSYTYTCILSGLIREGRLVCAF 650
Query: 203 SILAEMRRKSIRP-NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
L + +K I N+ + + G +K + + + + ME+ G++ + N
Sbjct: 651 IFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDG 710
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
++ + A +L+ ++ + PNL T+ L+HG+ + ++ KL+ M G P+
Sbjct: 711 YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ LC G E +K M K ++ ST+ L + I K E N+L
Sbjct: 771 RLTYHSLILGLCNHGMLELGIK-----MLKMFIAESSTIDDLTFNML-IRKCCEINDL 822
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 10/285 (3%)
Query: 112 RFHVHSIVLYGQANMIDHAMQTFE-EMDKYGLRQS--VDAL--NALLLGCILSKNYEEVK 166
R HS++L + +H M +M K + +S +D L N L+ C + ++V
Sbjct: 771 RLTYHSLIL----GLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVI 826
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+ T +V+ + + +T V S + + + EM +K P + + ++
Sbjct: 827 DL-THNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKR 885
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
+ + K+ M GI+ ++ L + EEA +L ML P
Sbjct: 886 MCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPT 945
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
T+ L+H F K+ N + A L M + + D + + C G+ TAL
Sbjct: 946 TSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYE 1005
Query: 347 ASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
KG +P+ +T + LV+ +++ V+ ++ + R SG
Sbjct: 1006 EIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSG 1050
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 5/283 (1%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
++ E++ + R N +SI+++G +A ++ A Q +EM + G + S L+
Sbjct: 250 RVFEKMSKEENCRPNSV--TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 307
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
++ ++ E + PN TY +I C G + +M + +
Sbjct: 308 KAKCDIGMTDKAMKMLDEMATKACV-PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 366
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
P F L+ G+ KE ++L +MEK + YN ++ LC++ +S +A
Sbjct: 367 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 426
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL ++ G+ P+ TY L+ GF KEG L A +F SM + G EPD + F LC
Sbjct: 427 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 486
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G E A + + + KG T +L+ G I K +
Sbjct: 487 KLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDV 529
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 2/261 (0%)
Query: 127 IDHAMQTFEEMDKY-GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+ A + FE+M K R + + L+ G + EE ++ E + G +P++ TY
Sbjct: 245 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE-KGCQPSTRTY 303
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+IK+ C+ G + +L EM K+ PN + +L+ +E K E+ V + M K
Sbjct: 304 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 363
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ G+ +N I CK A LL M KPN+ TY L+ G +
Sbjct: 364 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A L + + G PD + + C+ G+ A + + + G P T +L+
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483
Query: 366 GLASISKVAEANELIGLMKKR 386
GL + ++ +AN ++G M K+
Sbjct: 484 GLCKLGRLEQANGILGSMVKK 504
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 121/304 (39%), Gaps = 44/304 (14%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEE---VKRIFTEFPKVY 176
Y + + A Q M+K + ++ N L+ G C +SK+Y+ ++R+
Sbjct: 380 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN----- 434
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN ++ FC+ G + ++I M + P+ F L+ G K + E
Sbjct: 435 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 494
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE--------------------------- 269
+L M K GI+ + I CK+ +++
Sbjct: 495 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 554
Query: 270 --------EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
EA A+L M+ G+ P++ T+ LI G + G + K+ M GC P+
Sbjct: 555 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 614
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
Y + + LC G E A + + + G P+ T LV ++ A +++
Sbjct: 615 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 674
Query: 382 LMKK 385
M K
Sbjct: 675 TMVK 678
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 16/297 (5%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
++L+E+ T+ + H ++I++ + I+ A F +M K+GL + NAL+
Sbjct: 321 KMLDEMATKACV---PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 377
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIE-----PNSETYNKVIKSFCESGDSSSVYSILAEM 208
G Y + + + F + +E PN TYN++++ C S + +L +
Sbjct: 378 NG------YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 431
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
+ P+ + +L+ GF KE + + M G+ + I LCKL R
Sbjct: 432 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 491
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
E+A +L M+ +GI + T+ LI G K G + LF +M C ++ F F
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 551
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + + A + M G VP T L+ G + A + +++ MK+
Sbjct: 552 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 608
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 4/247 (1%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
GQ NM A F M+ GL AL+ G E+ I K GI +
Sbjct: 454 GQLNM---AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK-KGISLD 509
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
T+ +I C+ G + V + M A F L K++K + +L
Sbjct: 510 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 569
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M K G+ V + I I+ C+ + + +L+ M G PN+ TY +I+G G
Sbjct: 570 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 629
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+E A+ + SM++ G P+ + + + + G + A ++ + G P+
Sbjct: 630 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 689
Query: 362 SLVTGLA 368
+L++G
Sbjct: 690 ALLSGFV 696
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 131/329 (39%), Gaps = 25/329 (7%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD + F+ + + + L E + L F+ L G+ ++ A
Sbjct: 508 LDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL-GKDYKLNEANA 566
Query: 133 TFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+M KYGL SV L+ G C + +K + E K G PN TY +I
Sbjct: 567 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML--ERMKQAGCSPNVYTYTIIING 624
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C +G +IL M + PN + +L+ K + + +++ M K G
Sbjct: 625 LCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPN 684
Query: 252 VNVYNIRIQSLCKLKRSEEAKAL-----LDG-----------MLSRGIK----PNLDTYK 291
++Y+ + + A+AL LD LS IK P D Y
Sbjct: 685 SHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDLYN 744
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ G KEG + A +L M G PD + ++ C+ +Y+ L+ + +
Sbjct: 745 FLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY-CKTCKYDNCLEFMKLVLDN 803
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELI 380
+VP F++ ++ GL + +V EA +L+
Sbjct: 804 KFVPSFASYCWVIHGLRNEGRVQEAQKLV 832
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 59/256 (23%)
Query: 116 HSIVLYGQANMIDHAM--QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
H+I++ G + A+ + E M + G +V ++ G + EE + I
Sbjct: 583 HTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMS 642
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH-- 231
+G+ PN TY ++K+ ++G + I++ M + +PN+ + LL+GF +
Sbjct: 643 S-FGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTA 701
Query: 232 -------------------KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+ D + ++KCG+ + ++YN + LCK R EA
Sbjct: 702 IGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTE-DLYNFLVVGLCKEGRIIEAD 760
Query: 273 ALLDGMLSRGIKPN--------------------------LD--------TYKHLIHGFG 298
L M+ G+ P+ LD +Y +IHG
Sbjct: 761 QLTQDMVKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLR 820
Query: 299 KEGNLEGAKKLFASMT 314
EG ++ A+KL + +
Sbjct: 821 NEGRVQEAQKLVSDLV 836
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 9/288 (3%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDH--AMQTFEEMDKYGLRQSVDALNALLLGCILSKN 161
+PD+ H ++ ++ G + + A F++M + G + V + ++ +
Sbjct: 7 QPDV------HTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 162 YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
E IF+ + K GI PN TYN +I+ C ++L EM +I PN F
Sbjct: 61 VNEALDIFS-YMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 119
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
LL+ F KE + VL+ M + G+ V Y+ + EA+ L D M+++
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
G KP++ +Y LI+G+ K + AK+LF M + G PD + LCQ G A
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPK 389
+ + + G +P T L+ G +A+A L M+ + K
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 287
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 1/253 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ F M G+ ++ N+L+ G + E + E + I PN T++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL-NIMPNIVTFS 119
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ G+ +L M + PN + L+ G+ + + + K+ +M
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YNI I CK KR EAK L + M+ +G+ P++ +Y LI G + G L A
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF +M G PD + + C+ G A ++ RA + P+ L+
Sbjct: 240 HDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDA 299
Query: 367 LASISKVAEANEL 379
+ + EA +L
Sbjct: 300 MCKSRNLKEARKL 312
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 4/209 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P+ TY +I C+ G++ + + +M +P+ + ++ K+ + +
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
+ M+ GI+ + YN IQ LC R EA A+L+ M+S I PN+ T+ LI+
Sbjct: 65 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
F KEGN+ A+ + +MT G EP+ +Y M Y L Q +E A K+ + KG
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSL-QAEVFE-ARKLFDVMITKGCK 182
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLM 383
P + L+ G ++ EA +L M
Sbjct: 183 PDVFSYNILINGYCKAKRIGEAKQLFNEM 211
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+EPN TY+ ++ + + + M K +P+ + +L+ G+ K + +
Sbjct: 145 GVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 204
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M G+ + YN I LC+L R EA L ML+ G P+L TY L+ G
Sbjct: 205 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 264
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F K+G L A +LF +M + +P+ + + +C+ + A K+ +G P+
Sbjct: 265 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324
Query: 357 FSTMK 361
K
Sbjct: 325 MKHWK 329
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 5/223 (2%)
Query: 157 ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
+L K+ E +KR+ + + + YN +I +F ++G + ++ M + +RP+
Sbjct: 69 LLEKSVEALKRM-----EGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPD 123
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
F +L+ F K + + V K+ + M+ + V Y+I I ++CK E+A +
Sbjct: 124 TYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFL 183
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M SRG +PN+ TY +I G GK G+++ A LF MT+ G + + L + G
Sbjct: 184 DMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSG 243
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+ A K+ R ++KG P T SLV GL + +EA +
Sbjct: 244 RADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRI 286
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 46/351 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV--HSIVLYG--QANMIDH 129
D F++ ++ +A +++ +L EE++ QN +V +SI++ + ++
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQN-----QNCSPNVITYSILIDAVCKCGGVEK 177
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ F +M G R ++ +++ G S + ++ +F E G+ YN +I
Sbjct: 178 ALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTS-EGLVATRVVYNSLI 236
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
SG + + + EM K ++P+ F L+ G + + ++ Q G A
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCA 296
Query: 250 SGVNVYNIRIQSLCKLKRSEEA-------------------KALLDG------------- 277
VN+YN+ I +LCK KR +EA AL+DG
Sbjct: 297 LDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFIL 356
Query: 278 ---MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
M G P++ Y LI G K G +E A +L M + G EPD + C+
Sbjct: 357 LGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCK 416
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
GG E AL++ AKG+ + T +++ GL +V EA +L MK+
Sbjct: 417 GGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQ 466
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 1/263 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A A+ + M + GLR N L+ +K + V ++F E PN
Sbjct: 101 KAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQN-QNCSPNV 159
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ +I + C+ G + +M+ + RPN + ++ G K + + +
Sbjct: 160 ITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEE 219
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M G+ + VYN I L + R++ A L MLS+G++P+ T+ L++G G G
Sbjct: 220 MTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGR 279
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
A+++F + GC D + + LC+ + A ++ G VP T +
Sbjct: 280 ASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNA 339
Query: 363 LVTGLASISKVAEANELIGLMKK 385
L+ GL ++ +A L+G MK+
Sbjct: 340 LMDGLCKSGRIHDAFILLGDMKR 362
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 42/274 (15%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL-YGQANMIDHAMQT 133
R+ ++ + L ++ +A ++L E+ ++ Q + S+V G A A +
Sbjct: 229 RVVYNSLIHGLGRSGRADAAAKLFREMLSKG--LQPDHVTFTSLVYGLGVAGRASEARRI 286
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+E G V+ N L+ SK +E IF E + G+ P+ T+N ++ C
Sbjct: 287 FQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEE-DGLVPDVYTFNALMDGLC 345
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+SG + +L +M+R P+ T + L+ G K + E+ G++L M+ G V
Sbjct: 346 KSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVV 405
Query: 254 VYNIRIQ----------------------------------SLCKLKRSEEAKALLDGM- 278
YN I LC R +EA L +GM
Sbjct: 406 TYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMK 465
Query: 279 ---LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ I P+ TY L++G + G E A L
Sbjct: 466 QETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 148/339 (43%), Gaps = 40/339 (11%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
PL R A + + Q +N +S++LE L+T+ +E + + YG+ A
Sbjct: 103 PLPRDAVLGTLMRFKQLKKWNLVSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAE 162
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ + M+K G + SV + AL+ +K Y + + +F + G EP++ TY ++KS
Sbjct: 163 RVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRM-QTSGPEPSAVTYQIILKS 221
Query: 192 FCESG---DSSSVYSILAEMRRKSIRPNATDFGLLL-----AGFYK-------------- 229
F E ++ +++ L +R S +P+ F +++ AG Y
Sbjct: 222 FVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGI 281
Query: 230 -------------EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
E Y++V + M++ + V Y++ I++ K +R EEA A+ +
Sbjct: 282 PLSTVTFNSLMSFETDYKEVSNIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFE 341
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQ 334
ML G++P +Y LI F G +E A +F +M EPD SY + Y
Sbjct: 342 EMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAY--VN 399
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ + A K R G P+ +L+ G + ++ V
Sbjct: 400 ASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNV 438
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 133/309 (43%), Gaps = 8/309 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL--KTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+ + I + + + + + E+L + R + +++ I +Y +A A +
Sbjct: 213 VTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKL 272
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M + G+ S N+L+ +Y+EV I+ + + ++P+ +Y+ +IK++
Sbjct: 273 FAQMSERGIPLSTVTFNSLM---SFETDYKEVSNIYDQMQRT-ALKPDVVSYSLLIKAYG 328
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ ++ EM +RP + +L+ F E+ V + M + + +
Sbjct: 329 KARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLC 388
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + + + A+ + G+KPN+ Y L+ G+ K N+E +++ M
Sbjct: 389 SYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERM 448
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI-SK 372
G EP+ + + ++ A+ + A+G+ P K+++ LA +
Sbjct: 449 RMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGY-PADKKAKNILLSLAKTPEE 507
Query: 373 VAEANELIG 381
EANEL G
Sbjct: 508 QEEANELTG 516
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ + TY +I+ C++ + + +L EM ++PN + LL G+ + +++DV
Sbjct: 153 GVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDV 212
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
GKV + M + GI V ++ I LCK ++ +A + D M+ RG++PN+ TY LI+
Sbjct: 213 GKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINS 272
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-- 354
KEG++ A L M + G PD + L E + A+ + V
Sbjct: 273 LCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVE 332
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
P T S++ GL I ++ +A ++ +M +R
Sbjct: 333 PDVVTFNSVIHGLCKIGRMTQAVKVREMMAER 364
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS--SSVYSILAEMRRKS---IRPNAT 218
E + + P V ++ +YN V+ + C G S+L +M R++ RPNA
Sbjct: 69 EACSLLSALPDVR----DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAV 124
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ ++ G + + +L+ M+ G+ + V Y I+ LC + A LLD M
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
G++PN+ Y L+ G+ + G + K+F M+ G +PD F LC+ G+
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
A KV + +G P+ T L+ L V EA
Sbjct: 245 GKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREA 282
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ +Y V++ C S + ++L M+ +R + +G L+ G + + ++
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L M G+ V VY+ ++ C+ R ++ + + M RGIKP++ + LI K
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
EG A K+ M G EP+ + + LC+ G AL + + KG P T
Sbjct: 241 EGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300
Query: 360 MKSLVTGLASISKVAEA 376
+L+ GL+ + ++ EA
Sbjct: 301 YNTLIAGLSGVLEMDEA 317
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 131/291 (45%), Gaps = 28/291 (9%)
Query: 118 IVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT 170
+V YG A+ +D A++ +EM G++ +V + LL G S +++V ++F
Sbjct: 158 VVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFE 217
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKE 230
+ + GI+P+ + +I C+ G + + M ++ + PN + +L+ KE
Sbjct: 218 DMSR-RGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKE 276
Query: 231 HKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG--IKPNLD 288
+ + + M+ G+A V YN I L + +EA + L+ M+ ++P++
Sbjct: 277 GSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVV 336
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
T+ +IHG K G + A K+ M GC + + TY GG L+V +
Sbjct: 337 TFNSVIHGLCKIGRMTQAVKVREMMAERGCMCN-----LVTYNYLIGG----FLRVHKVK 387
Query: 349 MA---------KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
MA G P T L+ G + + +V A + + M++R K+
Sbjct: 388 MAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKA 438
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 115/297 (38%), Gaps = 39/297 (13%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG---IEPNSE 183
+ A+ +EMD G+ V N L+ G +E E + G +EP+
Sbjct: 279 VREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM--IQGDTVVEPDVV 336
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
T+N VI C+ G + + M + N + L+ GF + HK + ++ +
Sbjct: 337 TFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDEL 396
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL---------------- 287
G+ Y+I I K+ + A+ L M RGIK L
Sbjct: 397 AISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMM 456
Query: 288 ------------------DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
Y +IHG K G+++ K+L M + G PD+ + M
Sbjct: 457 ERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLI 516
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G+ E A +V + A G+VP + SL+ G ++ + + +LI M+ +
Sbjct: 517 NMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAK 573
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Query: 116 HSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
+SI++ G + M +D A + M + G++ + LL E +F E
Sbjct: 408 YSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD 467
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K G+ ++ Y+ +I C+SGD +V ++ +M + + P+A + +L+ + K
Sbjct: 468 KNCGL--DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDL 525
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
E+ +VL+ M G V V++ I+ ++++ L+ M ++ +
Sbjct: 526 EEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNV 575
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 140/312 (44%), Gaps = 12/312 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIV-LYGQANMIDHAM 131
L+++ + ++ L + +A QLL + + L Q ++I+ + +++ A
Sbjct: 159 LNKVCYGTLINGLCKVGQTSAALQLLRRVDGK--LVQPNVVMYNTIIDSMCKVKLVNEAF 216
Query: 132 QTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEV---KRIFTEFPKVYGIEPNSETYNK 187
+ EM G+ V +AL+ G CIL K + + ++ +E I P+ T++
Sbjct: 217 DLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISE-----EINPDVYTFSI 271
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ FC+ G ++LA M ++ I+P+ + L+ G+ + + M + G
Sbjct: 272 LVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + V YNI I CK+K+ +EA L M + I P++ TY LI G K G + A
Sbjct: 332 VTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYAL 391
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KL M + G D + LC+ + + A+ + +G P T L+ GL
Sbjct: 392 KLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGL 451
Query: 368 ASISKVAEANEL 379
++ +A +
Sbjct: 452 CKGGRLKDAQNI 463
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++PN YN +I S C+ + + + +EM K I P+ + L++GF K D
Sbjct: 192 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAI 251
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ M I V ++I + CK R +EAK +L M+ +GIKP++ TY L+ G+
Sbjct: 252 GLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGY 311
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ AK +F +M GG + + + C+ + + A+ + + K +P
Sbjct: 312 CLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDV 371
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
T SL+ GL K++ A +L+ M R P +N+ L
Sbjct: 372 VTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 143/328 (43%), Gaps = 20/328 (6%)
Query: 75 RMAFSIAVSKLSQANHFNAIS--QLLEELKTRPDLRQNERFHVHSIVL--------YG-- 122
+FS+ + L + NAI+ L++ L + + Q FH + L YG
Sbjct: 108 HFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTL 167
Query: 123 -----QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+ A+Q +D ++ +V N ++ K E +++E G
Sbjct: 168 INGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVS-KG 226
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I P+ TY+ +I FC G + + +M + I P+ F +L+ GF KE + ++
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
VL MM K GI V Y + C +K+ +AK++ + M G+ N+ +Y +I+GF
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K ++ A LF M PD + LC+ G+ ALK+ +G VPH
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG-VPHD 405
Query: 358 S-TMKSLVTGLASISKVAEANELIGLMK 384
T S++ L +V +A L+ MK
Sbjct: 406 KITYNSILDALCKNHQVDKAIALLTKMK 433
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 3/260 (1%)
Query: 110 NERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKR 167
N + SI++ G + + A M K G++ V +L+ G L K + K
Sbjct: 263 NPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKS 322
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
IF + G+ N ++YN +I FC+ ++ EM K+I P+ + L+ G
Sbjct: 323 IFNTMAQ-GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGL 381
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
K K K++ M G+ YN + +LCK + ++A ALL M GI+P++
Sbjct: 382 CKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDM 441
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
TY LI G K G L+ A+ +F + G Y + + C ++ AL +
Sbjct: 442 YTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSK 501
Query: 348 SMAKGWVPHFSTMKSLVTGL 367
G +P+ T + ++ L
Sbjct: 502 MEDNGCIPNAKTYEIIILSL 521
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ A F M + G+ +V + N ++ G K +E +F E I P
Sbjct: 311 YCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM-HCKNIIP 369
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN +I C+SG S ++ EM + + + + +L K H+ + +L
Sbjct: 370 DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 429
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+ GI + Y I I LCK R ++A+ + + +L +G + TY +I GF
Sbjct: 430 TKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ A L + M + GC P++ + + L + E + A K+ R +A+G +
Sbjct: 490 DLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 43/248 (17%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI + T+N +I F + G + +S+ A + +K PNA L+ G + + +
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQ---I 142
Query: 237 GKVLQMMEKCGIASGVNV----YNIRIQSLCKLKRSEEAKALL---DG------------ 277
+ L +K +A G ++ Y I LCK+ ++ A LL DG
Sbjct: 143 HQALHFHDKV-VALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 201
Query: 278 --------------------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
M+S+GI P++ TY LI GF G L A LF M +
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
PD Y F + C+ G + A V M +G P T SL+ G + +V +A
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321
Query: 378 ELIGLMKK 385
+ M +
Sbjct: 322 SIFNTMAQ 329
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%)
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
D S+ S + + P +FG +L K + Y+ + + ME GIAS + +N
Sbjct: 36 DEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFN 95
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I +L + + ++ +L +G +PN T LI G +G + A +
Sbjct: 96 ILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVAL 155
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
G + C+ LC+ G+ AL++ R K P+ +++ + + V EA
Sbjct: 156 GFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEA 215
Query: 377 NEL 379
+L
Sbjct: 216 FDL 218
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 7/269 (2%)
Query: 111 ERFHVHSIV-LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
++F ++V A +D A+ EM G+ + +A N +L + + + ++F
Sbjct: 313 DKFTYSTVVSALADAGRVDDAVALVHEMVVDGV-VAAEAFNPVLGAMLRTGDVTGAAKLF 371
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ F ++ G P++ TYN ++ G + + ++ M R + P +G ++ G +
Sbjct: 372 S-FMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVR 430
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ ED KV++ M G+ V++ I CKL + A + D M++ GIKPN+
Sbjct: 431 CGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVL 490
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRA 347
Y +I G + G + A+ LF M C P+ +Y + YF Q G+ AL
Sbjct: 491 YSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYF--QIGDSSQALSFWED 548
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G P+ T L+ GL ++ + +A
Sbjct: 549 MLRIGCTPNAVTYSVLINGLCNVGRSKDA 577
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 117/294 (39%), Gaps = 3/294 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D+ +S VS L+ A + L+ E+ + V +L + + A +
Sbjct: 313 DKFTYSTVVSALADAGRVDDAVALVHEMVVDGVVAAEAFNPVLGAML--RTGDVTGAAKL 370
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F M G S N LL G +L + + + + P TY V+
Sbjct: 371 FSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAE-VVPGVMTYGAVVDGLV 429
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G ++ EMR K + PN F ++ GF K + + +V M GI V
Sbjct: 430 RCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVV 489
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+Y+ I L + + EA+ L M+ PN+ TY ++ G+ + G+ A + M
Sbjct: 490 LYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDM 549
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
GC P++ + + LC G + A+ V + + +G VP S++ G
Sbjct: 550 LRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGF 603
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 128/316 (40%), Gaps = 20/316 (6%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
M + V L + +++EE++++ L NE I + + +D A + ++
Sbjct: 419 MTYGAVVDGLVRCGRLEDACKVIEEMRSK-GLVPNEFVFSPVITGFCKLGEVDRASRVWD 477
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G++ +V +A++ G E + +F E + + PN TY+ +++ + +
Sbjct: 478 TMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCV-PNIMTYSSMVRGYFQI 536
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
GDSS S +M R PNA + +L+ G + +D V + M G Y
Sbjct: 537 GDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAY 596
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRG-IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
I+ C + L ML+RG P++ Y L+ G + +L A L M
Sbjct: 597 TSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQML 656
Query: 315 NGGCEPDSYCFFMF-----------------TYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ C+PD+ F LC + A +V +AK VP
Sbjct: 657 DQACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEA 716
Query: 358 STMKSLVTGLASISKV 373
+ ++ +V G+ +V
Sbjct: 717 AVLEMVVRGVCRRKRV 732
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 5/270 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H ++L G+A AM M++ + V A++ G + E+ ++ E +
Sbjct: 390 LHGLLLCGRAKA---AMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEM-R 445
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ PN ++ VI FC+ G+ + M I+PN + ++ G + K
Sbjct: 446 SKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMT 505
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ + + M + + Y+ ++ ++ S +A + + ML G PN TY LI
Sbjct: 506 EAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLI 565
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+G G + A ++ M GC PD+ + C G + L++ +A+G
Sbjct: 566 NGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDT 625
Query: 355 -PHFSTMKSLVTGLASISKVAEANELIGLM 383
P L+ GL + A +L+ M
Sbjct: 626 HPDVICYNVLLDGLLRAKDLPRAMDLLNQM 655
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
Y+ + +L R ++A AL+ M+ G+ + + ++ + G++ GA KLF+ M
Sbjct: 317 YSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAAKLFSFMQ 375
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
GC P + + + + L G + A+ V R VP T ++V GL ++
Sbjct: 376 LKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLE 435
Query: 375 EANELIGLMKKR 386
+A ++I M+ +
Sbjct: 436 DACKVIEEMRSK 447
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 84/214 (39%), Gaps = 9/214 (4%)
Query: 178 IEPNSETYNKVIKSFCES--GDSSSVYSILA-EMRRKSIR-----PNATDFGLLLAGFYK 229
+ P ++N ++K C S + +Y LA + +SI P+ + +++
Sbjct: 267 LAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALAD 326
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
+ +D ++ M G+ + +N + ++ + A L M +G P+ T
Sbjct: 327 AGRVDDAVALVHEMVVDGVVAA-EAFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAAT 385
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y L+HG G + A + M P + L + G E A KV
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMR 445
Query: 350 AKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+KG VP+ ++TG + +V A+ + M
Sbjct: 446 SKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTM 479
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 5/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLL--EELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
+ ++ + + L ++ + NA + E K+ ++ +RF I YG A + ++
Sbjct: 126 NEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESI 185
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F+ M + G+ SV N+LL + K++F E YG+ P++ T+N +I+
Sbjct: 186 KVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRG 245
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK--CGIA 249
FC + + EM R P+ + L+ G + K + V++ M K ++
Sbjct: 246 FCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLS 305
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I+ C + EA +LL M+SRG+KPN TY LI G + L+ K++
Sbjct: 306 PNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEI 365
Query: 310 FASMT-NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M +GG PD+ C G+ E A V P +T LV L
Sbjct: 366 LEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLC 425
Query: 369 SISKVAEANEL 379
A E
Sbjct: 426 QRGDFRRAEEF 436
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 123/293 (41%), Gaps = 8/293 (2%)
Query: 101 LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
+K P+L N + I Y + A+ EM GL+ + N L+ G ++
Sbjct: 298 VKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQ 357
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+++K I G P++ T N +IK+ C G +S+ +M ++P++ +
Sbjct: 358 KLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATY 417
Query: 221 GLLLAGFYK-------EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+L+ + E ++++ + ++ G V YN + LC ++++A+
Sbjct: 418 SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAER 477
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
+ ++ RG + + +YK LI G +EG E L M PD+ + + L
Sbjct: 478 VFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLL 536
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G+ A K + +P + S++ L E+ L+ LM +R
Sbjct: 537 KKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLER 589
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 122/304 (40%), Gaps = 24/304 (7%)
Query: 77 AFSI--AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
AFS+ +S+L S L+ L R D R+ E F D +
Sbjct: 398 AFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEF-------------FDELAEKE 444
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+ G + V A N + + ++ +R+F + K +P S Y +I C
Sbjct: 445 ILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPS--YKTLILGHCR 502
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G + + +L M R+ P+A +GL++ G K+ K L+ M K +
Sbjct: 503 EGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAI 562
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
++ + +L + + E+ +L+ ML R I+ N+D H + K G + A MT
Sbjct: 563 FHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDK-----AFMT 617
Query: 315 NGGCEPDSYCFFM--FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
G + Y M FLCQ + A K+ S+ K ++++GL K
Sbjct: 618 IGLLYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHK 677
Query: 373 VAEA 376
V+EA
Sbjct: 678 VSEA 681
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 5/257 (1%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
AM EM + + + + N L+ G +K +E + E + G PNS T +
Sbjct: 16 EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVTCTTL 74
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL--QMMEKC 246
+ C+ G +L M++K + +G L++GF D GK L +M+ K
Sbjct: 75 MDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL-DRGKELFDEMLGK- 132
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI++ V Y+ + LC+L + +EA +L+ M GI P++ TY LI G K+G A
Sbjct: 133 GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHA 192
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L M G EP + + + LC+ G A K+ R + KG T +L+ G
Sbjct: 193 MDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKG 252
Query: 367 LASISKVAEANELIGLM 383
L KV EA +L M
Sbjct: 253 LCDKGKVDEALKLFNSM 269
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 5/297 (1%)
Query: 81 AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKY 140
+ K +A H + L+ E P N ++V L + +ID A + M +
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEP---SNVTYNVLLSGLCKEGLVID-AFKILRMMIEK 237
Query: 141 GLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSS 199
G + V N L+ G C K E +K + F +EPN T+N +I C+ G +
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
I +M +K N + +LL G K K ++ ++ + + G Y+I I
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 357
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
CK++ AK L M + G+ P L Y L+ KEG+LE AK LF M N CE
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
PD F + G+++ ++ + G P T +L+ L+ + ++ EA
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 10/263 (3%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+VLYG +D + F+EM G+ +V + L+ G ++E +
Sbjct: 102 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 161
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ +GI P+ TY +I C+ G ++ +L M K P+ + +LL+G K
Sbjct: 162 NAMAE-HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 220
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR--GIKPNL 287
E D K+L+MM + G + V YN ++ LC + +EA L + M ++PN+
Sbjct: 221 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNV 280
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ LI G KEG L A K+ M G + + M + G+ + A+++ +
Sbjct: 281 FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQ 340
Query: 348 SMAKGWVPHFSTMKSLVTGLASI 370
+ G+VP+ T L+ G +
Sbjct: 341 VLDLGFVPNSFTYSILIDGFCKM 363
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N V+K C +G ++ EM RKS+ P+ + L+ G K K ++ +L ME
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G + LCK R +EA LL+ M +G ++ Y LI GF GNL+
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
K+LF M G + + + LC+ G+++ A V A G P T L+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 366 GLASISKVAEANELIGLMKKR 386
GL + A +L+ LM ++
Sbjct: 182 GLCKDGRATHAMDLLNLMVEK 202
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ +YN +I C++ +L EM PN+ L+ G K+ + ++
Sbjct: 29 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 88
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++L+ M+K G + V +Y I C + K L D ML +GI N+ TY L+HG
Sbjct: 89 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 148
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ G + A + +M G PD + LC+ G A+ + + KG P
Sbjct: 149 CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 208
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
T L++GL V +A +++ +M ++ K+
Sbjct: 209 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 1/251 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A++ +M K G ++ N LL GC+ + +E ++ + + G PNS TY+ +I
Sbjct: 299 AVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL-GFVPNSFTYSILI 357
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+ + + EMR + P D+ L+A KE E + Q M
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +N I K + K L M+ G++P+ T+ LI+ K G L+ AK
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M G PD+ + L G+ + + AKG V + +++T L
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537
Query: 370 ISKVAEANELI 380
+ + EL+
Sbjct: 538 SIQEVDVMELL 548
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 148/339 (43%), Gaps = 40/339 (11%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
PL R A + + Q +N +S++LE L+T+ +E + + YG+ A
Sbjct: 103 PLPRDAVLGTLMRFKQLKKWNLVSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAE 162
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ + M+K G + SV + AL+ +K Y + + +F + G EP++ TY ++KS
Sbjct: 163 RVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRM-QTSGPEPSAVTYQIILKS 221
Query: 192 FCESG---DSSSVYSILAEMRRKSIRPNATDFGLLL-----AGFYK-------------- 229
F E ++ +++ L +R S +P+ F +++ AG Y
Sbjct: 222 FVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGI 281
Query: 230 -------------EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
E Y++V + M++ + V Y++ I++ K +R EEA A+ +
Sbjct: 282 PLSTVTFNSLMSFETNYKEVSSIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFE 341
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQ 334
ML G++P +Y LI F G +E A +F +M EPD SY + Y
Sbjct: 342 EMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAY--VN 399
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ + A K R G P+ +L+ G + ++ V
Sbjct: 400 ASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNV 438
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 133/309 (43%), Gaps = 8/309 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL--KTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
+ + I + + + + + E+L + R + +++ I +Y +A A +
Sbjct: 213 VTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKL 272
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F +M + G+ S N+L+ NY+EV I+ + + ++P+ +Y+ +IK++
Sbjct: 273 FAQMSERGIPLSTVTFNSLM---SFETNYKEVSSIYDQMQRT-ALKPDVVSYSLLIKAYG 328
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++ ++ EM +RP + +L+ F E+ V + M + + +
Sbjct: 329 KARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLC 388
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y + + + A+ + G+KPN+ Y L+ G+ K N+E +++ M
Sbjct: 389 SYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERM 448
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI-SK 372
G EP+ + + ++ A+ + A+G+ P K+++ LA +
Sbjct: 449 RMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGY-PADKKAKNILLSLAKTPEE 507
Query: 373 VAEANELIG 381
EANEL G
Sbjct: 508 QEEANELTG 516
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G PN+ +N ++ + C+ G S+ Y + MR + P + +L+ GF KE K
Sbjct: 40 GCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRA 99
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++LQ M G YN + LCK + ++A AL M + I+ ++ Y LI G
Sbjct: 100 LEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDG 159
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ G L A L M N GC P C+ +LC+G A K+ + G +P
Sbjct: 160 LCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPD 219
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
+ T +V G ++ +A L+ MK
Sbjct: 220 WLTFGMMVFGYCRGHRIDDALLLLQQMK 247
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 118/287 (41%), Gaps = 16/287 (5%)
Query: 111 ERFHVHSIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
E+ + ++V +G +AN + A + E M + G NAL+ I+ +
Sbjct: 3 EKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFP-----NALVFNGIMDALCK 57
Query: 164 EVKRI----FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
E + + E + G+ P TYN +I FC+ IL EM + PN
Sbjct: 58 EGRSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVT 117
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L G K K +D + + M + I V Y I LC+ + EA +LLD M
Sbjct: 118 YNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G P Y ++ K + A KLF MT G PD F M + C+G +
Sbjct: 178 NSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRID 237
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
AL + + + G P +L+ L +V+EA L+ M R
Sbjct: 238 DALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISR 284
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 3/193 (1%)
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M K P FG+L+ G K ++ D +++++M + G V+N + +LCK R
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
S EA ++ M S G+ P + TY LI GF KE L A ++ MT G EP+ +
Sbjct: 61 SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR- 386
F + LC+ G+ + AL + RA K +L+ GL K+AEA L+ M+
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180
Query: 387 -FPKSGDMWNAAL 398
PK G +NA L
Sbjct: 181 CVPKPG-CYNAIL 192
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 4/215 (1%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P T+ ++ C++ + + ++ M + PNA F ++ KE + +
Sbjct: 5 GCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEA 64
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M G++ + YNI I CK ++ A +L M RG +PN TY +HG
Sbjct: 65 YGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHG 124
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
K G ++ A LF +MT D Y + LCQ G+ A + G VP
Sbjct: 125 LCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPK 184
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKRFPKSG 391
++++ L S++ EA++L KR SG
Sbjct: 185 PGCYNAILSWLCKGSRINEAHKLF----KRMTGSG 215
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 8/218 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ ++I + + + ++L+E+ R P+ F +H + YG+ +D A+
Sbjct: 81 VTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTF-LHGLCKYGK---VDDALA 136
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F M + +R V L+ G + E + E G P YN ++
Sbjct: 137 LFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENS-GCVPKPGCYNAILSWL 195
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ + + + M I P+ FG+++ G+ + H+ +D +LQ M+ G+A
Sbjct: 196 CKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPRE 255
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTY 290
+YN I +L + R EA LL M+SRG+ PN TY
Sbjct: 256 VIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTY 293
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 108/284 (38%), Gaps = 2/284 (0%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ F I V L +AN +L+E + R F+ L + + A E
Sbjct: 11 VTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAE-AYGYIE 69
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G+ ++ N L+ G + I E G EPN TYN + C+
Sbjct: 70 TMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTG-RGHEPNHVTYNTFLHGLCKY 128
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G ++ M K IR + + L+ G + K + +L ME G Y
Sbjct: 129 GKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCY 188
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + LCK R EA L M GI P+ T+ ++ G+ + ++ A L M +
Sbjct: 189 NAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKS 248
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G P + L + G A ++ + +++G P+ T
Sbjct: 249 AGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRT 292
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ + TY +I+ C++ + ++ EM I PN + LL G+ K ++EDV
Sbjct: 145 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 204
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
GKV M + GI V +Y I SLCK+ ++++A ++D M+ RG++PN+ TY LI+
Sbjct: 205 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINC 264
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG+++ A + M+ G PD + L E + A+ + M +G++
Sbjct: 265 MCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE-EMVRGYIIQ 323
Query: 357 FSTMKSL 363
S ++
Sbjct: 324 SSQQSAI 330
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR---RKSIRPNATDF 220
E + P V ++ +YN V+ + C G ++L M + RPNA +
Sbjct: 63 EATSLLDALPSVR----DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+L+ + + + +L+ M G+ + V Y I+ LC ++A L+ M
Sbjct: 119 TVLMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
GI+PN+ Y L+ G+ K G E K+F M+ G EPD + LC+ G+ +
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKK 238
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A V + +G P+ T L+ + V EA IG++KK
Sbjct: 239 AHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA---IGVLKK 280
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLE--ELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
D ++++ ++ L + H + LL L+ P R N + + D A+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQAV 135
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
M G+R V L+ G + ++ + E + GIEPN Y+ +++
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE-SGIEPNVVVYSSLLQG 194
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+C+SG V + EM K I P+ + L+ K K + V+ MM + G+
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V YN+ I +CK +EA +L M +G+ P++ TY LI G ++ A L
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314
Query: 312 SMTNG 316
M G
Sbjct: 315 EMVRG 319
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
PN+ +Y ++++ C + +L MR +R + +G L+ G + + ++
Sbjct: 113 PNAVSYTVLMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M + GI V VY+ +Q CK R E+ + M +GI+P++ Y LI K
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A + M G EP+ + + +C+ G + A+ V + KG P T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292
Query: 360 MKSLVTGLASISKVAEANELIGLMKKRF 387
+L+ GL+ + ++ EA L+ M + +
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGY 320
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 7/270 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A++ F+ M+ G ++ + N L+ G +K + G+ P+ T+N
Sbjct: 330 LEKAIEVFKRMETMGFSPTITSYNTLIAG-YCNKGLLNSGMKLKILMEKNGVRPDDVTFN 388
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC G I +EM+ + PN + L+ G+ + E G++ M +
Sbjct: 389 TLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRN 448
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + + YN I LC R+++A L+ + + PN T+ LI G N E A
Sbjct: 449 GIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERA 508
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+L+ SM GC P+ + F M C+ +++ A++V R + P T+ L G
Sbjct: 509 FQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELCRG 568
Query: 367 LASIS------KVAEANELIGLMKKRFPKS 390
L K+ + E+ LM + F KS
Sbjct: 569 LWLSGKEELALKLCKEMEMKHLMPEGFDKS 598
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 1/246 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y Q + +A+ F +M YG V++ NA + I S ++ F + Y I P
Sbjct: 254 YAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASI-SLQRGDIALTFYREMQRYRISP 312
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N T N V+ +FC+ G + M P T + L+AG+ + K+
Sbjct: 313 NVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 372
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+MEK G+ +N I C+ + EA + M + + PN TY LI+G+ +
Sbjct: 373 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 432
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
GN E +L M G + D + LC G + A + + + VP+ ST
Sbjct: 433 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTF 492
Query: 361 KSLVTG 366
+L+TG
Sbjct: 493 SALITG 498
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 112/285 (39%), Gaps = 19/285 (6%)
Query: 107 LRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCI---LSKN 161
L +N +F VL G + IDH + FE + Y R + C+ L K
Sbjct: 201 LTKNHKFKSAESVLKGILGSGSIDHPSKLFEAI-LYSYRICDSS------PCVFDSLFKT 253
Query: 162 YEEVKR------IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
Y ++K+ +F + K YG P E+ N I + + EM+R I P
Sbjct: 254 YAQMKKLRNAIDVFCQM-KDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISP 312
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALL 275
N +++ F K K E +V + ME G + + YN I C L
Sbjct: 313 NVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLK 372
Query: 276 DGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQG 335
M G++P+ T+ LI+GF + G L A K+F+ M P++ + Q
Sbjct: 373 ILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQV 432
Query: 336 GEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
G E ++ + G T +L+ GL + +A L+
Sbjct: 433 GNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLV 477
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 5/283 (1%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
++ E++ + R N +SI+++G +A ++ A Q +EM + G + S L+
Sbjct: 227 RVFEKMSKEENCRPNSV--TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLI 284
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSI 213
++ ++ E + PN TY +I C G + +M + +
Sbjct: 285 KAKCDIGMTDKAMKMLDEMATKACV-PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 343
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
P F L+ G+ KE ++L +MEK + YN ++ LC++ +S +A
Sbjct: 344 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 403
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
LL ++ G+ P+ TY L+ GF KEG L A +F SM + G EPD + F LC
Sbjct: 404 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 463
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ G E A + + + KG T +L+ G I K +
Sbjct: 464 KLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDV 506
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 2/261 (0%)
Query: 127 IDHAMQTFEEMDKY-GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+ A + FE+M K R + + L+ G + EE ++ E + G +P++ TY
Sbjct: 222 LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE-KGCQPSTRTY 280
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+IK+ C+ G + +L EM K+ PN + +L+ +E K E+ V + M K
Sbjct: 281 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 340
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G+ G+ +N I CK A LL M KPN+ TY L+ G +
Sbjct: 341 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A L + + G PD + + C+ G+ A + + + G P T +L+
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460
Query: 366 GLASISKVAEANELIGLMKKR 386
GL + ++ +AN ++G M K+
Sbjct: 461 GLCKLGRLEQANGILGSMVKK 481
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 121/304 (39%), Gaps = 44/304 (14%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEE---VKRIFTEFPKVY 176
Y + + A Q M+K + ++ N L+ G C +SK+Y+ ++R+
Sbjct: 357 YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN----- 411
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ P+ TYN ++ FC+ G + ++I M + P+ F L+ G K + E
Sbjct: 412 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 471
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE--------------------------- 269
+L M K GI+ + I CK+ +++
Sbjct: 472 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA 531
Query: 270 --------EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
EA A+L M+ G+ P++ T+ LI G + G + K+ M GC P+
Sbjct: 532 LGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPN 591
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
Y + + LC G E A + + + G P+ T LV ++ A +++
Sbjct: 592 VYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVS 651
Query: 382 LMKK 385
M K
Sbjct: 652 TMVK 655
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 16/297 (5%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALL 153
++L+E+ T+ + H ++I++ + I+ A F +M K+GL + NAL+
Sbjct: 298 KMLDEMATKACV---PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 354
Query: 154 LGCILSKNYEEVKRIFTEFPKVYGIE-----PNSETYNKVIKSFCESGDSSSVYSILAEM 208
G Y + + + F + +E PN TYN++++ C S + +L +
Sbjct: 355 NG------YCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 408
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
+ P+ + +L+ GF KE + + M G+ + I LCKL R
Sbjct: 409 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 468
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
E+A +L M+ +GI + T+ LI G K G + LF +M C ++ F F
Sbjct: 469 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 528
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
L + + A + M G VP T L+ G + A + +++ MK+
Sbjct: 529 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 585
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 100/247 (40%), Gaps = 4/247 (1%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
GQ NM A F M+ GL AL+ G E+ I K GI +
Sbjct: 431 GQLNM---AFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVK-KGISLD 486
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
T+ +I C+ G + V + M A F L K++K + +L
Sbjct: 487 EVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG 546
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M K G+ V + I I+ C+ + + +L+ M G PN+ TY +I+G G
Sbjct: 547 KMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNG 606
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+E A+ + SM++ G P+ + + + + G + A ++ + G P+
Sbjct: 607 RVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYS 666
Query: 362 SLVTGLA 368
+L++G
Sbjct: 667 ALLSGFV 673
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 120/269 (44%), Gaps = 7/269 (2%)
Query: 116 HSIVLYGQANMIDHAM--QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP 173
H+I++ G + A+ + E M + G +V ++ G + EE + I
Sbjct: 560 HTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMS 619
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+G+ PN TY ++K+ ++G + I++ M + +PN+ + LL+GF +
Sbjct: 620 S-FGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTA 678
Query: 234 EDVGKVLQM--MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ ++ ++S N N + +L + A + D + G+ P D Y
Sbjct: 679 IGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGV-PTEDLYN 737
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
L+ G KEG + A +L M G PD + ++ C+ +Y+ L+ + +
Sbjct: 738 FLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSIIEHY-CKTCKYDNCLEFMKLVLDN 796
Query: 352 GWVPHFSTMKSLVTGLASISKVAEANELI 380
+VP F++ ++ GL + +V EA +L+
Sbjct: 797 KFVPSFASYCWVIHGLRNEGRVQEAQKLV 825
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 11/220 (5%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
YG+ P+ T+ +I+ C +G+++ +L M++ PN + +++ G + E+
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 610
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L M G++ Y + +++ K R + A ++ M+ G +PN Y L+
Sbjct: 611 AETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLS 670
Query: 296 GFGKEGNLEGAKKL-----FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMA 350
GF GA+ L + + E D+ C + L + + ALK+ R +
Sbjct: 671 GFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLM---DVDHALKI-RDEIK 726
Query: 351 KGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--FP 388
K VP LV GL ++ EA++L M K FP
Sbjct: 727 KCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 766
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 117/249 (46%), Gaps = 1/249 (0%)
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
Q+F + K+ V +L+ G + + + + +F++ K+ GI+PN TY+ VI S
Sbjct: 268 QSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDM-KMAGIKPNVYTYSIVIDS 326
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
C G + + + +EM PNA F L+ K + E V KV M++ G +
Sbjct: 327 LCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPAD 386
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
YN I+S C+ + EEA +L+ M+ +G+ PN T+ + K ++ GA +++A
Sbjct: 387 TISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYA 446
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M C+P++ + + + + LK+ + P+ +T + L++ +
Sbjct: 447 RMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMK 506
Query: 372 KVAEANELI 380
A +L+
Sbjct: 507 HWNNAYKLM 515
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 108/266 (40%), Gaps = 2/266 (0%)
Query: 120 LYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
L G+ D A + M G+ +V +AL+ + + E F + YG
Sbjct: 187 LAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRM-EDYGCT 245
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ ++ VI S C+ ++ S ++ + P+ + L+ G+ + +V
Sbjct: 246 PDMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLVHGWCRAGDISKAEEV 304
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M+ GI V Y+I I SLC+ + A + M+ G PN T+ L+ K
Sbjct: 305 FSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVK 364
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G E K++ M GC D+ + C+ E A K+ + KG P+ ST
Sbjct: 365 AGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNAST 424
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+ +A + V A+ + MK+
Sbjct: 425 FNFIFGCIAKLHDVNGAHRMYARMKE 450
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 134/318 (42%), Gaps = 12/318 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR--PDLRQNERFHVHSIVLYG--QANMIDH 129
D +AFSI +S L + N + LK R PD+ V++ +++G +A I
Sbjct: 247 DMVAFSIVISSLCKKRRANEAQSFFDSLKHRFEPDVV------VYTSLVHGWCRAGDISK 300
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + F +M G++ +V + ++ +F+E G +PN+ T+N ++
Sbjct: 301 AEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDA-GCDPNAVTFNSLM 359
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ ++G + V + +M+R + + ++ ++ E+ K+L +M K G+A
Sbjct: 360 RVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVA 419
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ +N + KL A + M +PN TY L+ F + + + K+
Sbjct: 420 PNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKM 479
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM-AKGWVPHFSTMKSLVTGLA 368
M EP+ + + C + A K+ + K P+ S ++++ L
Sbjct: 480 KKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLR 539
Query: 369 SISKVAEANELIGLMKKR 386
++ + EL+ M R
Sbjct: 540 KAGQLKKHEELVDKMVAR 557
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILS-KNYEEVKRIFTEFPKVYGIEPNSETY 185
++ A + M K G+ + N + GCI + R++ K +PN+ TY
Sbjct: 403 LEEAAKILNLMVKKGVAPNASTFN-FIFGCIAKLHDVNGAHRMYARM-KELNCQPNTLTY 460
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMME 244
N +++ F ES + V + EM + PN + +L++ F + + K++ +M+E
Sbjct: 461 NILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVE 520
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
+ + ++VY ++ L K + ++ + L+D M++RG
Sbjct: 521 EKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVARG 558
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN + KL++ + A ++D M SRG++ + T+ L+ + + G A
Sbjct: 173 GFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEA 232
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
F M + GC PD F + LC+ A S+ + P SLV G
Sbjct: 233 VHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFD-SLKHRFEPDVVVYTSLVHG 291
Query: 367 LASISKVAEANELIGLMK 384
+++A E+ MK
Sbjct: 292 WCRAGDISKAEEVFSDMK 309
>gi|297610680|ref|NP_001064892.2| Os10g0484900 [Oryza sativa Japonica Group]
gi|255679504|dbj|BAF26806.2| Os10g0484900 [Oryza sativa Japonica Group]
Length = 434
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 14/268 (5%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A++ F D +S +L+ALL + ++VK +G+ P ++N
Sbjct: 134 DDALRAFS--DSAPAARSDVSLSALLSALFRAGRVDDVKSTLASAETSFGVAPGRASHNV 191
Query: 188 VIKSFCESGDSSSVYSILAEMRRK---SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
++ + ++ + ++ +L EM +K P+ + +LAG+ + E K+L+ +
Sbjct: 192 LLHALVKNSELAAARKLLGEMAKKLKHRPAPDIVSYNTVLAGYSAQGDEEGFEKLLKEIS 251
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ V YN RIQ K + + + LLD M S+ + PN TY L+ G+ KEGN+
Sbjct: 252 AKKLEPNVVTYNCRIQWFAKKGETFKGEELLDAMESKDVAPNYLTYNALVQGYCKEGNVG 311
Query: 305 GAKKLFASM---------TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
A ++F M ++ G S + + L + + AL +C++ A P
Sbjct: 312 SAMRVFKRMKVMKRREGRSDLGVSAHSQTYVVLFRSLVEKERLDDALWICKSCFAMKAAP 371
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
F +K LV GL K AEA +++ M
Sbjct: 372 PFEAVKGLVEGLVKGGKSAEAKDVVAKM 399
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ I F D+ +S A R + +A LL+ ++ + +DV L E
Sbjct: 125 RAISLFPGPDDALRAFSDSAPAARSDVSLSA-----LLSALFRAGRVDDVKSTLASAETS 179
Query: 247 -GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK----PNLDTYKHLIHGFGKEG 301
G+A G +N+ + +L K A+ LL G +++ +K P++ +Y ++ G+ +G
Sbjct: 180 FGVAPGRASHNVLLHALVKNSELAAARKLL-GEMAKKLKHRPAPDIVSYNTVLAGYSAQG 238
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ EG +KL ++ EP+ + + + GE ++ A +K P++ T
Sbjct: 239 DEEGFEKLLKEISAKKLEPNVVTYNCRIQWFAKKGETFKGEELLDAMESKDVAPNYLTYN 298
Query: 362 SLVTGLASISKVAEANELIGLMK 384
+LV G V A + MK
Sbjct: 299 ALVQGYCKEGNVGSAMRVFKRMK 321
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 137/319 (42%), Gaps = 25/319 (7%)
Query: 104 RPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYE 163
R L NE + I +A + A++ EE+ + G++ +V ALL G +
Sbjct: 189 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 248
Query: 164 EVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
E + +F G+ PN ETY ++ F ++ + IL EM+ K I+P+ +G +
Sbjct: 249 EAEEVFRAMLNA-GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 307
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR-----------------------IQ 260
L G E + E+ ++ +++ GI + +Y +
Sbjct: 308 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVD 367
Query: 261 SLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEP 320
LCK E AK L D ML +G+ P+ Y LI G K GNL+ A L M G E
Sbjct: 368 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 427
Query: 321 DSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
D + + + L G+ + A + + KG +P L+ ++ KV EA EL
Sbjct: 428 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 487
Query: 381 GLMKKRFPKSGDMWNAALP 399
M KR +G + + A+P
Sbjct: 488 NEMAKRGMITG-LSDHAVP 505
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 3/259 (1%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK-NYEEVKRIFTEFPKVYGIEPNSET 184
M++ A + F +M K+ + + NALL LSK ++ R F + GI+ + T
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHR--LSKVGRGDLSRKFFKDMGAAGIKRSVFT 58
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN +I C+ GD S+ +M+ P+ + L+ G K ++ + + M+
Sbjct: 59 YNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
V YN I CK +R +A L M + G+KPN+ TY I F KEG L+
Sbjct: 119 DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 178
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A K F M P+ + + C+ G ALK+ + G + T +L+
Sbjct: 179 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 238
Query: 365 TGLASISKVAEANELIGLM 383
GL ++ EA E+ M
Sbjct: 239 DGLCEEGRMKEAEEVFRAM 257
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 1/259 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A F +M + G + N+L+ G +E IF + K +P+ TYN
Sbjct: 72 LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM-KDADCDPDVITYN 130
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC+ + L EM+ ++PN + + F KE ++ K M +
Sbjct: 131 ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV 190
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
+ Y I + CK EA L++ +L GIK N+ TY L+ G +EG ++ A
Sbjct: 191 ALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEA 250
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+++F +M N G P+ + + + E E A + + K P +++ G
Sbjct: 251 EEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWG 310
Query: 367 LASISKVAEANELIGLMKK 385
L + S++ EA LIG +K+
Sbjct: 311 LCNESRLEEAKLLIGEIKE 329
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D + + F++M G+++SV N ++ + E + +FT+ K G P+ TYN
Sbjct: 38 DLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQM-KEAGFTPDIVTYNS 96
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I + G I +M+ P+ + L+ F K + + L M+ G
Sbjct: 97 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 156
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V Y+ I + CK +EA M + PN TY LI K GNL A
Sbjct: 157 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 216
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
KL + G + + + LC+ G + A +V RA + G P+ T +LV G
Sbjct: 217 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 276
Query: 368 ASISKVAEANELIGLMKKRFPK 389
++ A +++ MK++ K
Sbjct: 277 IKAKEMEYAKDILKEMKEKCIK 298
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 24/260 (9%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + EM GL+ +V + + +E + F + +V + PN TY +I
Sbjct: 145 AFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRV-ALTPNEFTYTSLI 203
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+ C++G+ + ++ E+ + I+ N + LL G +E + ++ +V + M G+A
Sbjct: 204 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVA 263
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
Y + K K E AK +L M + IKP+L Y ++ G E LE AK L
Sbjct: 264 PNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLL 323
Query: 310 FASMTNGGCEPDS--YCFFMFTYF---------------------LCQGGEYETALKVCR 346
+ G ++ Y M YF LC+ +E A K+
Sbjct: 324 IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFD 383
Query: 347 ASMAKGWVPHFSTMKSLVTG 366
+ KG +P +L+ G
Sbjct: 384 EMLDKGMMPDKIAYTALIDG 403
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 140/327 (42%), Gaps = 40/327 (12%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTF 134
A+ + L++ + + L+ ++++ L I++ Y ++ + A+ TF
Sbjct: 79 AYHTMIESLAKIRQYQIMWDLVNKMRSLKILN----VETFCIIMRKYARSQKVKEAVYTF 134
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFT------------------------ 170
M+KY + ++ A N+LL SKN + + IF
Sbjct: 135 NIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKAP 194
Query: 171 EFPKV---------YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFG 221
PK G +P+ TY ++ C++G I+ EM +P + +
Sbjct: 195 NLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYS 254
Query: 222 LLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR 281
+L+ + E++ ED ME+ I + V VYN I + CK+ + + A +L+ M +
Sbjct: 255 VLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCK 314
Query: 282 GIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA 341
GI+PN T +++ G+ + A ++F M C+PD+ + M C+ + E A
Sbjct: 315 GIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMA 373
Query: 342 LKVCRASMAKGWVPHFSTMKSLVTGLA 368
LKV + K +VP T L+ GL
Sbjct: 374 LKVWKYMRLKQFVPSMHTFSVLINGLC 400
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 119/295 (40%), Gaps = 10/295 (3%)
Query: 111 ERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG--CILSKNY---EEV 165
+R + HSI Y MI+ + + + L + +L L + CI+ + Y ++V
Sbjct: 70 QRNYTHSIRAYH--TMIESLAKIRQYQIMWDLVNKMRSLKILNVETFCIIMRKYARSQKV 127
Query: 166 KRIFTEFPKV--YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLL 223
K F + Y + PN +N ++ + C+S + I M+ + I P++ + +L
Sbjct: 128 KEAVYTFNIMEKYDVPPNLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFI-PDSKTYSIL 186
Query: 224 LAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
L G+ K ++ + M G + Y I + LCK R +EA ++ M S
Sbjct: 187 LEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVC 246
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
KP Y L+H +G E +E A F M E D + C+ + + A +
Sbjct: 247 KPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYR 306
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
V KG P+ T ++ L S EA + M K D + +
Sbjct: 307 VLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIKVCDPDADTYTMMI 361
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 7/230 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAM 131
D + + I V L +A + +++E+ + + + F ++S+++ YG N I+ A+
Sbjct: 214 DIVTYGIMVDILCKAGRVDEAVGIVKEMDS--SVCKPTSF-IYSVLVHTYGIENRIEDAV 270
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
TF +M++ + V NAL+ + R+ E GI PNS T N ++ S
Sbjct: 271 YTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEM-DCKGIRPNSRTCNIILNS 329
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
GD+ + + M K P+A + +++ F + K E KV + M
Sbjct: 330 LISCGDTDEAFRVFRRMI-KVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPS 388
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
++ +++ I LCK + +A LL+ M+ +GI+P+ T+ L KEG
Sbjct: 389 MHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEG 438
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 9/227 (3%)
Query: 117 SIVLYG-------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
IV YG +A +D A+ +EMD + + + L+ + E+ F
Sbjct: 214 DIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTF 273
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ + IE + YN +I +FC+ + Y +L EM K IRPN+ ++L
Sbjct: 274 LDMER-NEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLIS 332
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
++ +V + M K + Y + I+ C+ + E A + M + P++ T
Sbjct: 333 CGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHT 391
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+ LI+G K+GN A L M G P S F L + G
Sbjct: 392 FSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEG 438
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 5/311 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLL--EELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
+ ++ + + L ++ + NA + E K+ ++ +RF I YG A + ++
Sbjct: 126 NEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESI 185
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ F+ M + G+ SV N+LL + K++F E YG+ P++ T+N +I+
Sbjct: 186 KVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRG 245
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK--CGIA 249
FC + + EM R P+ + L+ G + K + V++ M K ++
Sbjct: 246 FCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLS 305
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V Y I+ C + EA +LL M+SRG+KPN TY LI G + L+ K++
Sbjct: 306 PNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEI 365
Query: 310 FASMT-NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
M +GG PD+ C G+ E A V P +T LV L
Sbjct: 366 LEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLC 425
Query: 369 SISKVAEANEL 379
A E
Sbjct: 426 QRGDFRRAEEF 436
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 16/274 (5%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSK---NYEEVKRIFTEFPKVYGIEP 180
+M+D F+EM ++ V N L+ G C K + VK + + P + P
Sbjct: 250 SMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSP---NLSP 306
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I+ +C D + S+LAEM + ++PN + L+ G + K + + ++L
Sbjct: 307 NVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEIL 366
Query: 241 Q-MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M+ G N I++ C + + EEA ++ + M ++P+ TY L+ +
Sbjct: 367 EGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQ 426
Query: 300 EGNLEGAKKLFASMT-------NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
G+ A++ F + + GC+P + +LC G+ + A +V R M +G
Sbjct: 427 RGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG 486
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ K+L+ G +L+ LM +R
Sbjct: 487 -TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRR 519
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 124/327 (37%), Gaps = 27/327 (8%)
Query: 77 AFSI--AVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
AFS+ +S+L S L+ L R D R+ E F D +
Sbjct: 398 AFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEF-------------FDELAEKE 444
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
+ G + V A N + + ++ +R+F + K +P S Y +I C
Sbjct: 445 ILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPS--YKTLILGHCR 502
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
G + + +L M R+ P+A +GL++ G K+ K L+ M K +
Sbjct: 503 EGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAI 562
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF-----GKEGNLEGAKKL 309
++ + +L + + E+ +L+ ML R I+ N+D H + LE K L
Sbjct: 563 FHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKML 622
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
S+ C + + LC+ + A + + KG + + L L +
Sbjct: 623 LFSLEKRQSVDIDMCSTVISG-LCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEA 681
Query: 370 ISKVAEANELIGLMKKRFPKSGDMWNA 396
++ EA + K+ P+ W +
Sbjct: 682 EGRLNEAK----FVSKKMPEVPKQWQS 704
>gi|90399325|emb|CAJ86125.1| H0313F03.9 [Oryza sativa Indica Group]
Length = 466
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 140/324 (43%), Gaps = 41/324 (12%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQ-ANMIDHAMQTFEE 136
+S+ + +L+ F+ + ++L + R ++ F I +YG AN A++T
Sbjct: 74 YSLMIDRLASCRRFSDVEEVLARARAE-SFRFSDEFFYRLIKMYGNVANHPQKAIETLFA 132
Query: 137 MDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESG 196
M Y S N +L + + YE V ++ ++ G+ ++ +N ++K C+ G
Sbjct: 133 MPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRL-GVTLDTCCFNILVKGLCQFG 191
Query: 197 DSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYN 256
S+L EM ++ PN T + L+ + + + ++ + M+K IA+ VYN
Sbjct: 192 KFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADAVVYN 251
Query: 257 IRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNG 316
I I LC+ +R EA L M+ +G PN TY+ L+ G G AK L + M
Sbjct: 252 ILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSMM--- 308
Query: 317 GCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
RA + P FS+ K L+ GL S++ + +A
Sbjct: 309 -----------------------------RAERMR---PGFSSFKLLIDGLCSVNCLDDA 336
Query: 377 NELIGLMKKRFPKSGDMWNAALPR 400
+ ++K+ ++ D W + +
Sbjct: 337 HL---VLKQMVEQAWDYWGLIMAK 357
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 98/249 (39%), Gaps = 36/249 (14%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR------------------------ 214
+PN Y+ +I S V +LA R +S R
Sbjct: 68 KPNEALYSLMIDRLASCRRFSDVEEVLARARAESFRFSDEFFYRLIKMYGNVANHPQKAI 127
Query: 215 ------------PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
P+ F +L + +YE V +V + G+ +NI ++ L
Sbjct: 128 ETLFAMPGYNCWPSTKTFNYVLHMLVCKRQYEVVHEVYLSASRLGVTLDTCCFNILVKGL 187
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C+ + ++A +LL M +G PN+ TY L++ + G ++ A +L M D+
Sbjct: 188 CQFGKFDDAISLLYEMPKQGCVPNVTTYSTLMNFLCQHGQVDKAFELCERMQKEDIAADA 247
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + LC+ A + ++ + KG P+ T + L+ GL S K EA L+ +
Sbjct: 248 VVYNILISGLCREQRVTEAFNLFKSMVPKGCYPNSGTYQVLLDGLLSSGKFVEAKGLVSM 307
Query: 383 MKKRFPKSG 391
M+ + G
Sbjct: 308 MRAERMRPG 316
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 143/324 (44%), Gaps = 2/324 (0%)
Query: 62 CCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLY 121
C L+ L+ F +S + A + A E+ K +L + + Y
Sbjct: 74 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAE-NLVPGGIVYNSIVQAY 132
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
QA ++ +M++ G + ++ +L G ++ E+ F K G+ P
Sbjct: 133 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRL-KACGLSPT 191
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ TY ++K F ++G+ + IL EM + + PN + +++ G+ + + KV +
Sbjct: 192 AATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWE 251
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M G+ + +YNI + + CK R ++A +L+ + + + P ++TY ++ G+ K G
Sbjct: 252 DMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGG 311
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
N++ A ++F + G P + L + + E A + +A G VP+ +
Sbjct: 312 NIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYT 371
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
+L G A V +A + MKK
Sbjct: 372 ALTEGYARAGDVEKAFGMFQRMKK 395
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 124/268 (46%), Gaps = 1/268 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
+ L+ +A + A+ EEMDK+G+ + ++ G ++ +++ + G
Sbjct: 199 VKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSA-G 257
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
++P+ YN ++ +FC++G +L + + P + +L G+ K +
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKAL 317
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V ++ G+ GV YN + L K ++ E A+ +L+ ML+ G+ PN +Y L G+
Sbjct: 318 EVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGY 377
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ G++E A +F M D + C+ G + A +V + G +
Sbjct: 378 ARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNR 437
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
T +++ G A ++++A +L+ M+K
Sbjct: 438 ITYCTMLDGWARKGELSKARDLLNDMQK 465
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 124/274 (45%), Gaps = 13/274 (4%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKT---RPDLRQNERFHVHSIVLYG--QAN 125
SP ++M +++ + ++ F A ++ E++ + +PD+ +++I+++ +A
Sbjct: 224 SP-NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIV------IYNILVHAFCKAG 276
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+D A+ E ++ L +++ ++L G + N ++ +F K G+ P +Y
Sbjct: 277 RMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRI-KTAGLRPGVVSY 335
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ ++ + +L EM + PN + L G+ + E + Q M+K
Sbjct: 336 NSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKK 395
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
+A + Y +++ CK + A + + G+K N TY ++ G+ ++G L
Sbjct: 396 ENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSK 455
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
A+ L M G D+ C+ F + G+ E
Sbjct: 456 ARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTE 489
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 127/325 (39%), Gaps = 6/325 (1%)
Query: 47 ARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPD 106
AR + F++ + A L P D + ++I V +A + +LE ++
Sbjct: 238 ARGGDFTAAFKVWEDMVSAGLKP----DIVIYNILVHAFCKAGRMDKALGVLENIEANRL 293
Query: 107 LRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
L E + + Y + I A++ F+ + GLR V + N+LL G ++ E +
Sbjct: 294 LPTIETY-TSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENAR 352
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+ E G+ PN +Y + + + +GD + + M+++++ + +G LL
Sbjct: 353 LMLNEML-ANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 411
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
K + +V Q + G+ Y + + +A+ LL+ M G +
Sbjct: 412 CCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLD 471
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCR 346
Y I + G+ E + A M E ++ + + + + A+
Sbjct: 472 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYE 531
Query: 347 ASMAKGWVPHFSTMKSLVTGLASIS 371
+ A G + L++GL S +
Sbjct: 532 QAKASGLQLDSALSNCLLSGLISCA 556
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 2/158 (1%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGK-VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAK 272
+P ++GLL+ FY H + + + M I V++Y I + + + E A
Sbjct: 14 KPVLREYGLLV-DFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAV 72
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
A + MLS+GI+ N + +I G+ GN E A+ F P +
Sbjct: 73 ACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAY 132
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
CQ G ET + +G+ + +++ G A I
Sbjct: 133 CQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEI 170
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/286 (18%), Positives = 91/286 (31%), Gaps = 75/286 (26%)
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
N+ ++ F K P Y ++ + GD + + MR I+PN +
Sbjct: 1 NWHKIVNAFQVIDK-----PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIY 55
Query: 221 GLLLAGFYKEHKYED--------VGKVLQMMEK--CGIASGVN----------------- 253
L+ + + E + + +Q+ E C I SG
Sbjct: 56 TSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKA 115
Query: 254 --------VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG------- 298
VYN +Q+ C+ E +ALL M G + NL Y +++GF
Sbjct: 116 ENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEK 175
Query: 299 ----------------------------KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
K GN+ A + M G P+ + M
Sbjct: 176 CLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMD 235
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+GG++ A KV ++ G P LV ++ +A
Sbjct: 236 GYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKA 281
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 5/263 (1%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H + +G+ + A+ +M++ G +V AL+ G + + I+ +
Sbjct: 361 IHGLCSHGK---MGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM-M 416
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G PN Y ++ C S S +S++ +M + PN F + G + E
Sbjct: 417 TNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVE 476
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
+ ME+ G + + YN + L K R +EA L+ M +G++ NL TY +
Sbjct: 477 CAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIF 536
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG-W 353
GF G E A KL M GG +PD+ + TY C G+ +TA+++ A G W
Sbjct: 537 GGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKW 596
Query: 354 VPHFSTMKSLVTGLASISKVAEA 376
VP + SL+ G+ + V EA
Sbjct: 597 VPEVAAYTSLLWGICNQIGVEEA 619
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 131/316 (41%), Gaps = 21/316 (6%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQT 133
++I + L + N + +LL E+ + PD +V Y +
Sbjct: 186 TYNILLKALCKNNRVDGACKLLVEMSNKGCEPD-----------VVSYTTVISSMSKLGK 234
Query: 134 FEEMDKYGLR--QSVDALNALLLGCILSKNYEEVKRIFTEFPKVY--GIEPNSETYNKVI 189
EE + +R +V NAL+ G + Y+ VK +F ++ GI+PN TY+ VI
Sbjct: 235 VEEARELSIRFQPNVSVYNALING--FCREYK-VKEVFLLLGQMVEKGIDPNVITYSTVI 291
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
S G+ ++ A+M + PN F L+ G++ + + + M + G
Sbjct: 292 SSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFE 351
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V YN I LC + EA ++ M G PN+ TY LI GF K G+L GA ++
Sbjct: 352 PNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEI 411
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ M GC P+ + LC+ + A + P+ T + + GL
Sbjct: 412 WNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCC 471
Query: 370 ISKVAEANELIGLMKK 385
+V A L M++
Sbjct: 472 SGRVECAINLFCQMEQ 487
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 1/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ A+ + +M G +V +L+ G + E I+ + G EPN YN
Sbjct: 300 VELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAE-EGFEPNVVAYN 358
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C G S+ ++M R PN + +G L+ GF K ++ M
Sbjct: 359 TLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTN 418
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V VY + LC+ +A +L++ M + PN T+ I G G +E A
Sbjct: 419 GCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECA 478
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
LF M GC P+ + L + + AL++ KG + T ++ G
Sbjct: 479 INLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538
Query: 367 LASISKVAEANELIGLM 383
++ K EA +L+G M
Sbjct: 539 FCNVGKFEEALKLLGKM 555
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ ++ V+ L +++ F+ L+E++ T P+ F + + G+ ++ A+
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTF-IKGLCCSGR---VECAIN 480
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
F +M++YG ++ N +L G + +E + TE + G+E N TYN + F
Sbjct: 481 LFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEE-KGMELNLVTYNTIFGGF 539
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG-IASG 251
C G +L +M ++P+A + L + + K + ++L + G
Sbjct: 540 CNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPE 599
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG-FGKEGNLEGAKKLF 310
V Y + +C EEA LD ML+ GI N T+ L+ G F G+L L
Sbjct: 600 VAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILD 659
Query: 311 ASMTNG 316
+T+G
Sbjct: 660 DILTSG 665
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 30/233 (12%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
K+ GI + + + VI ++ G + + +R +P + LL E+++
Sbjct: 106 KLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRF 165
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG----------- 282
+ + + M++ G V YNI +++LCK R + A LL M ++G
Sbjct: 166 QMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTV 225
Query: 283 -------------------IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+PN+ Y LI+GF +E ++ L M G +P+
Sbjct: 226 ISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVI 285
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ L G E AL V +G P+ T SL+ G +V EA
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEA 338
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
K+ + + +++ +E + V +LQ M+ GI+ +++ I + ++ +E+
Sbjct: 73 KAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQ 132
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A + + G +P + Y HL+ E + + ++++M G EP+ Y + +
Sbjct: 133 ALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLK 192
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKS 390
LC+ + A K+ KG P + ++++ ++ + KV EA EL RF +
Sbjct: 193 ALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL----SIRFQPN 248
Query: 391 GDMWNAAL 398
++NA +
Sbjct: 249 VSVYNALI 256
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 2/282 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I YGQ+ + D A++ F + ++G Q+ NALL + ++ ++ + G
Sbjct: 160 ISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRRMAR-KG 218
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ T++ ++ ++C +G + L +M + P LL+ G + + E+
Sbjct: 219 VAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAK 278
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
M K G+ V +N ++LC E A ALL SRG+ P++ TYK +I
Sbjct: 279 AFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAV 338
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G ++ A +LF + G P + LC+ G + A +KG P+
Sbjct: 339 AKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNR 398
Query: 358 STMKSLVTGLASISKVAE-ANELIGLMKKRFPKSGDMWNAAL 398
LV + E AN L+ + + F +N+ +
Sbjct: 399 PVYVMLVKMCVRGGRFVEAANYLVEMSEAGFAPRAPTFNSVV 440
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 97/252 (38%), Gaps = 36/252 (14%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
H +M GL S +A++ S+ ++ +F P+ +G ++ YN +
Sbjct: 136 HLWSLAADMRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPR-FGCPQTTQVYNAL 194
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + C +G + Y +L M RK G+
Sbjct: 195 LDALCANGSFAGAYKLLRRMARK-----------------------------------GV 219
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A ++ + + C + EA+A LD M RG P + L+ G + G LE AK
Sbjct: 220 APDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKA 279
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
MT G PD F LC G+ E A+ + + ++G P ST K ++ +A
Sbjct: 280 FALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVA 339
Query: 369 SISKVAEANELI 380
++ EA L
Sbjct: 340 KAGRIDEAFRLF 351
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 1/224 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ A + A ++M + G V + L+ G + + EE K K G+ P
Sbjct: 233 WCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTK-EGVLP 291
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ T+N + ++ C SGD ++LA+ + + P+ + + +++ K + ++ ++
Sbjct: 292 DVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLF 351
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G ++Y I++LCK R +A A M S+G PN Y L+ +
Sbjct: 352 YAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRG 411
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
G A M+ G P + F L G+++ A ++
Sbjct: 412 GRFVEAANYLVEMSEAGFAPRAPTFNSVVDGLRHCGKHDLAQRM 455
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%)
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M + G+ + T+ +I +G+ + A ++F + GC + + LC G
Sbjct: 144 MRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGS 203
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A K+ R KG P +T +LV + K+ EA + M +R
Sbjct: 204 FAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAER 252
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 2/282 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I YGQ+ + D A++ F + ++G Q+ NALL + ++ ++ + G
Sbjct: 156 ISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGAYKLLRRMAR-KG 214
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ T++ ++ ++C +G + L +M + P LL+ G + + E+
Sbjct: 215 VAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAK 274
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
M K G+ V +N ++LC E A ALL SRG+ P++ TYK +I
Sbjct: 275 AFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAV 334
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K G ++ A +LF + G P + LC+ G + A +KG P+
Sbjct: 335 AKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNR 394
Query: 358 STMKSLVTGLASISKVAE-ANELIGLMKKRFPKSGDMWNAAL 398
LV + E AN L+ + + F +N+ +
Sbjct: 395 PVYVMLVKMCVRGGRFVEAANYLVEMSEAGFAPRAPTFNSVV 436
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 97/252 (38%), Gaps = 36/252 (14%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
H +M GL S +A++ S+ ++ +F P+ +G ++ YN +
Sbjct: 132 HLWSLAADMRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPR-FGCPQTTQVYNAL 190
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+ + C +G + Y +L M RK G+
Sbjct: 191 LDALCANGSFAGAYKLLRRMARK-----------------------------------GV 215
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A ++ + + C + EA+A LD M RG P + L+ G + G LE AK
Sbjct: 216 APDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKA 275
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
MT G PD F LC G+ E A+ + + ++G P ST K ++ +A
Sbjct: 276 FALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVA 335
Query: 369 SISKVAEANELI 380
++ EA L
Sbjct: 336 KAGRIDEAFRLF 347
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 1/224 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ A + A ++M + G V + L+ G + + EE K K G+ P
Sbjct: 229 WCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLEEAKAFALRMTK-EGVLP 287
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ T+N + ++ C SGD ++LA+ + + P+ + + +++ K + ++ ++
Sbjct: 288 DVATFNSLAEALCSSGDVEFAVALLADASSRGLCPDISTYKVMIPAVAKAGRIDEAFRLF 347
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G ++Y I++LCK R +A A M S+G PN Y L+ +
Sbjct: 348 YAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFGDMKSKGHPPNRPVYVMLVKMCVRG 407
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
G A M+ G P + F L G+++ A ++
Sbjct: 408 GRFVEAANYLVEMSEAGFAPRAPTFNSVVDGLRHCGKHDLAQRM 451
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%)
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M + G+ + T+ +I +G+ + A ++F + GC + + LC G
Sbjct: 140 MRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGS 199
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ A K+ R KG P +T +LV + K+ EA + M +R
Sbjct: 200 FAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAER 248
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 2/258 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
++ E M + G V L+ G +N + R+ E + +G +P+ YN +
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFG-QPDVFAYNAL 164
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I FC+ +L MR K P+ + +++ K + KVL +
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y I I++ +EA L+D MLSRG+KP++ TY +I G KEG ++ A +
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ ++ GCEPD + + L G++E K+ ++ P+ T L+T L
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 369 SISKVAEANELIGLMKKR 386
K+ EA L+ LMK++
Sbjct: 345 RDGKIEEAMNLLKLMKEK 362
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 142/301 (47%), Gaps = 12/301 (3%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D A++ ++ + N + +++L+ ++++ PD + S+ G+ +D A
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPD-TVTYNIMIGSLCSRGK---LDLA 212
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
++ ++ + +V L+ +L +E ++ E G++P+ TYN +I+
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNTIIR 271
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM--EKCGI 248
C+ G + ++ + K P+ + +LL + K+E+ K++ M EKC
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD- 330
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V Y+I I +LC+ + EEA LL M +G+ P+ +Y LI F +EG L+ A +
Sbjct: 331 -PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+M + GC PD + LC+ G+ + AL++ G P+ S+ ++ + L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 369 S 369
S
Sbjct: 450 S 450
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 156/351 (44%), Gaps = 23/351 (6%)
Query: 57 RILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVH 116
R+LD +P D + ++I + L + ++L +L L N + V
Sbjct: 179 RVLDRMRSKDFSP----DTVTYNIMIGSLCSRGKLDLALKVLNQL-----LSDNCQPTVI 229
Query: 117 SIVLYGQANM----IDHAMQTFEEMDKYGLRQSVDALNALLLG-C---ILSKNYEEVKRI 168
+ + +A M +D A++ +EM GL+ + N ++ G C ++ + +E V+ +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
++ G EP+ +YN ++++ G ++ +M + PN + +L+
Sbjct: 290 -----ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
++ K E+ +L++M++ G+ Y+ I + C+ R + A L+ M+S G P++
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
Y ++ K G + A ++F + GC P+S + L G+ AL +
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK-RFPKSGDMWNAAL 398
M+ G P T S+++ L V EA EL+ M+ F S +N L
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 113/257 (43%), Gaps = 2/257 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I A++ E ++K+G + V A NAL+ G ++ R+ + P++ TYN
Sbjct: 140 IPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYN 197
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I S C G +L ++ + +P + +L+ E ++ K++ M
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ + YN I+ +CK + A ++ + +G +P++ +Y L+ +G E
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+KL M + C+P+ + + LC+ G+ E A+ + + KG P + L+
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 367 LASISKVAEANELIGLM 383
++ A E + M
Sbjct: 378 FCREGRLDVAIEFLETM 394
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 127/288 (44%), Gaps = 16/288 (5%)
Query: 96 QLLEELKTR---PDLRQNERFHVHSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALN 150
+L++E+ +R PD+ ++ ++ G + M+D A + ++ G V + N
Sbjct: 249 KLMDEMLSRGLKPDM------FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYN 302
Query: 151 ALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETYNKVIKSFCESGDSSSVYSILAEM 208
LL + +EE +++ T K++ +PN TY+ +I + C G ++L M
Sbjct: 303 ILLRALLNQGKWEEGEKLMT---KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 209 RRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRS 268
+ K + P+A + L+A F +E + + + L+ M G + YN + +LCK ++
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 269 EEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
++A + + G PN +Y + G+ A + M + G +PD +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LC+ G + A ++ + + P T ++ G ++ +A
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 8/229 (3%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHAMQ 132
+ +SI ++ L + LL+ +K + PD + I + + +D A++
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL----IAAFCREGRLDVAIE 389
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
E M G + N +L + ++ IF + +V G PNS +YN + +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSYNTMFSAL 448
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
SGD ++ EM I P+ + +++ +E ++ ++L M C V
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
YNI + CK R E+A +L+ M+ G +PN TY LI G G G
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 1/194 (0%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
K+ C SG+ +L M RK P+ L+ GF+ +V++++EK
Sbjct: 94 KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKF 153
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V YN I CK+ R ++A +LD M S+ P+ TY +I G L+ A
Sbjct: 154 G-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
K+ + + C+P + + G + ALK+ +++G P T +++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 367 LASISKVAEANELI 380
+ V A E++
Sbjct: 273 MCKEGMVDRAFEMV 286
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 140/332 (42%), Gaps = 44/332 (13%)
Query: 74 DRMAFSIAVSKLSQANH-FNAISQL--LEELKTRPDLRQNERFHVHSIVLYG--QANMID 128
D + S ++ Q N F+AI + +EE+ RPD+ +++ ++ G + +++
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV------VIYNTIIDGSCKIGLVN 191
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ F+ M++ G+R N+L+ G S + + R+ + + I PN T+ V
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV-MRDIVPNVITFTAV 250
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I F + G S + EM R+ + P+ + L+ G + ++ ++L +M G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI------------------------- 283
V YN I CK KR +E L M RG+
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 284 -------KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+PN+ TY L++G +E A LF +M E D + + + +C+ G
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
E A + R+ KG P + ++++G
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q N + A+ +M++ G R V N ++ G + +F + G+
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER-DGVRA 207
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN ++ C SG S ++ +M + I PN F ++ F KE K+ + K+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + + V YN I LC R +EAK +LD M+++G P++ TY LI+GF K
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 327
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
++ KLF M G D+ + Q G + A ++ ++ P+ T
Sbjct: 328 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTY 384
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
L+ GL +V +A L M+K
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQK 409
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G EP+ T + +I FC+ ++++M RP+ + ++ G K D
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 192
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ ME+ G+ + YN + LC R +A L+ M+ R I PN+ T+ +I
Sbjct: 193 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F KEG A KL+ MT +PD + + LC G + A ++ + KG +P
Sbjct: 253 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ G +V E +L M +R
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 5/282 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ V+ L + ++ ++L+ ++ R D+ N I ++ + AM+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EEM + + V N+L+ G + +E K++ + G P+ TYN +I FC
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML-DLMVTKGCLPDVVTYNTLINGFC 325
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S + EM ++ + + + ++ G+++ + + ++ M+ +
Sbjct: 326 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIR 382
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I + LC R E+A L + M I+ ++ TY +IHG K GN+E A LF S+
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 442
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ G +PD + C+ +++ + + R G +P
Sbjct: 443 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 148/369 (40%), Gaps = 19/369 (5%)
Query: 26 LLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMA-FSIAVSK 84
LL G+ I T + +S N +D+ C + PL + FS +SK
Sbjct: 21 LLQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFC--KMIQSRPLPSIVDFSKVLSK 78
Query: 85 LSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFEEMDKYGL 142
++++ +++ + L ++ + ++IV+ + + A+ +M K+G
Sbjct: 79 IAKSKNYDLVISLFHHMEV---CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGY 135
Query: 143 RQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-----YGIEPNSETYNKVIKSFCESGD 197
V +++L+ G + + R+F V G P+ YN +I C+ G
Sbjct: 136 EPDVVTVSSLING------FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 198 SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNI 257
+ + M R +R +A + L+AG ++ D ++++ M I V +
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 258 RIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGG 317
I K + EA L + M R + P++ TY LI+G G ++ AK++ M G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 318 CEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEAN 377
C PD + C+ + K+ R +G V T +++ G + A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 378 ELIGLMKKR 386
E+ M R
Sbjct: 370 EIFSRMDSR 378
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 123/281 (43%), Gaps = 13/281 (4%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY------GI 178
N I+ A+ + G V + NA+L + + IF E KVY G+
Sbjct: 146 NFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRK----PVIFAE--KVYREMIASGV 199
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
N +YN +I+ FC +G+ EM R PN + ++ + K + ++ K
Sbjct: 200 SLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFK 259
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L+ M G+ + YN+ I LC++ R EE +L M +G P+ TY L++G+
Sbjct: 260 LLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYC 319
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K GN A L + M G PD + +C+ G A++ +G P+
Sbjct: 320 KVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGV 379
Query: 359 TMKSLVTGLASISKVAEANELIG-LMKKRFPKSGDMWNAAL 398
T SL+ G + + EA + +++ FP + +NA L
Sbjct: 380 TYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 11/261 (4%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFP-----KVYGI 178
A ++ ++ FEEM++ +V N ++ Y ++KRI F + G+
Sbjct: 216 AGNLEMGLRFFEEMERNRCLPNVVTYNTVI------GAYCKLKRIDEAFKLLRSMGLEGL 269
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
EPN TYN VI C G +LAEM RK P+ + L+ G+ K +
Sbjct: 270 EPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALV 329
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+ M + G+ V Y I ++CK A D M RG++PN TY LI+GF
Sbjct: 330 LHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFS 389
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
++G ++ A +++ M G P + C G E A+ + R KG P
Sbjct: 390 QKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVV 449
Query: 359 TMKSLVTGLASISKVAEANEL 379
+ +++ G ++ A ++
Sbjct: 450 SYSTIIAGFCRYQELDRAFQM 470
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 108/260 (41%), Gaps = 1/260 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + A+ EM + GL V +L+ + N F + V G+ P
Sbjct: 318 YCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM-HVRGLRP 376
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY +I F + G Y I EM R P + LL G + E+ +L
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ME G++ V Y+ I C+ + + A + M+ +G+ P+ TY LI G ++
Sbjct: 437 RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQ 496
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
L A LF M N PD + + C+ G+ AL + + KG++P T
Sbjct: 497 RRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTY 556
Query: 361 KSLVTGLASISKVAEANELI 380
L+ GL ++ EA L+
Sbjct: 557 NVLINGLNKQARTREAKRLL 576
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 4/255 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A + + EM G+ +V + N L+ G + N E R F E + + PN TYN VI
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCL-PNVVTYNTVI 245
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
++C+ + +L M + + PN + +++ G + + E+ VL M++ G A
Sbjct: 246 GAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFA 305
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
YN + CK+ +A L ML G+ P++ TY LI+ K GNL A +
Sbjct: 306 PDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEF 365
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F M G P+ + Q G + A ++ + G+ P T +L+ G
Sbjct: 366 FDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCV 425
Query: 370 ISKVAEANELIGLMK 384
++ EA IGL++
Sbjct: 426 SGRMEEA---IGLLR 437
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I+ EMD+ G N L+ G N+ + + +E + G+ P+ TY
Sbjct: 289 IEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLR-NGLPPDVVTYT 347
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I + C++G+ + +M + +RPN + L+ GF ++ ++ ++ M +
Sbjct: 348 SLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS 407
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + YN + C R EEA LL GM +G+ P++ +Y +I GF + L+ A
Sbjct: 408 GFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRA 467
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ A M G PD+ + LC+ A + + + K +P T SL+ G
Sbjct: 468 FQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLING 527
Query: 367 LASISKVAEANELIGLMKKR 386
+ EA L M K+
Sbjct: 528 YCKEGDLNEALNLHDEMIKK 547
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 22/321 (6%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D + ++ ++ + +A + N + +++ R LR N + I + Q +D A
Sbjct: 340 PPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR-GLRPNGVTYTSLINGFSQKGFMDEAY 398
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++EM + G ++ NALL G +S EE + + G+ P+ +Y+ +I
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM-EGKGLSPDVVSYSTIIAG 457
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
FC + + + AEM K + P+A + L+ G ++ + + + Q M +
Sbjct: 458 FCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
Y I CK EA L D M+ +G P+ TY LI+G K+ AK+L
Sbjct: 518 EFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLL 577
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
+ P+ G Y+T ++ C F ++ +L+ G
Sbjct: 578 KLFYDESIPN-------------GITYDTLIESCSDI-------EFKSVVALIKGFCMKG 617
Query: 372 KVAEANELIGLMKKRFPKSGD 392
+ EA+++ M KR K +
Sbjct: 618 LMNEADQVFESMIKRNQKPNE 638
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 18/265 (6%)
Query: 71 SPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHA 130
SP D + +S + L + N L +E+ + L +E + I Y + ++ A
Sbjct: 480 SP-DAITYSSLIQGLCEQRRLNEACDLFQEMLNK-SLLPDEFTYTSLINGYCKEGDLNEA 537
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ +EM K G N L+ G E KR+ + I PN TY+ +I+
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESI-PNGITYDTLIE 596
Query: 191 S---------------FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
S FC G + + M +++ +PN + +++ G ++
Sbjct: 597 SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHK 656
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
K+ + M G +++L E+ ++ +L + + K L+
Sbjct: 657 AHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQ 716
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEP 320
KEGN++ L M G P
Sbjct: 717 INHKEGNIDAVFNLLTEMAKDGFLP 741
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 151/383 (39%), Gaps = 62/383 (16%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKT---------------------RP------- 105
D F + +S+L N F +LE +K RP
Sbjct: 49 DHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVF 108
Query: 106 ------DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILS 159
LR ++ ++ + + + N + A+ + EM + G+ SV +LN L+ L
Sbjct: 109 HKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKA--LC 166
Query: 160 KNYEEVK---RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPN 216
KN E V RIF E P G +P+S TY +I C G+ S + EM +K +
Sbjct: 167 KNKETVDSALRIFQEMPN-RGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSAS 225
Query: 217 ATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD 276
+ L+ G + + ++ +L+ M++ I V Y+ + LCK S +A LL+
Sbjct: 226 VVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLE 285
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M + PN+ TY LI+G KE L A ++ M G +P++ + LC G
Sbjct: 286 VMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAG 345
Query: 337 EYETALKVCRASMAKG-------WVPHFSTMKSLVTGLASISKVAEANELIGLMKKR--- 386
Y+ A + G W H +V GL + A +L M+ R
Sbjct: 346 SYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCIS 405
Query: 387 ------------FPKSGDMWNAA 397
F K GD+ AA
Sbjct: 406 VEIDTFDCLVKCFCKRGDLHKAA 428
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
Q+N +D A+ EEM + + +V ++L+ G + + ++ K + + PN
Sbjct: 238 QSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHL-PNM 296
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TY+ +I C+ IL MR + ++PNA +G +++G Y++ +
Sbjct: 297 VTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDE 356
Query: 243 MEKCGIASG-------VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
M GI+ V ++N+ +Q LC A L M +R I +DT+ L+
Sbjct: 357 MVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVK 416
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPD 321
F K G+L A ++ M GC PD
Sbjct: 417 CFCKRGDLHKAARILEEMVLDGCIPD 442
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 23/295 (7%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ + I A + E M YG + N L +G + +E R+ E ++ P
Sbjct: 288 FARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALP 347
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN ++ + + SS +L EMR K ++P +++ KE K E+ L
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ + + G+A V YN I + CK +A L+D M+ +G+K + T +++ K
Sbjct: 408 EKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM 467
Query: 301 GNLEGAKKLFASMTNGGCEPD--SYCFFMFTYFLCQGGEY--ETALKVCRASMAKGWVPH 356
E A++L S G PD SY M YF EY E AL++ + + +P
Sbjct: 468 KRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYF----KEYNPEPALRLWDQMIERKLIPS 523
Query: 357 FSTMKSLVTGLASISKVAEA----NELI--GLMKKR---------FPKSGDMWNA 396
ST +L+ GL + ++ EA NEL+ GL+ + K GD+ NA
Sbjct: 524 ISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENA 578
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 132/287 (45%), Gaps = 46/287 (16%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEE----VKRIFTEFPKVYGIEPNSETY 185
A++ EEM G++ ++ N ++ EE +++I E G+ P+ TY
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE-----GLAPDVITY 422
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIR------------------------------- 214
N +I ++C++G+ + ++++ EM K ++
Sbjct: 423 NTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQ 482
Query: 215 ----PNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
P+ +G ++A ++KE+ E ++ QM+E+ I S ++ YN I+ LC+++R +
Sbjct: 483 RGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS-ISTYNTLIKGLCRMERLK 541
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
EA L+ ++ +G+ P+ TY +IH + KEG+LE A + M +PD
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
LC G+ + ALK+ + + KG T +L+ + + V A
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTA 648
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 3/261 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A + A +EM GL+ LN +L K YE+ + + P+ G P
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQ-RGFVP 487
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK-EHKYEDVGKV 239
+ +Y V+ ++ + + + +M + + P+ + + L+ G + E E + K+
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+++EK G+ YNI I + CK E A + M+ KP++ T L++G
Sbjct: 548 NELVEK-GLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCL 606
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G L+ A KLF S G + D + +C+ G+ +TAL KG P T
Sbjct: 607 HGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFT 666
Query: 360 MKSLVTGLASISKVAEANELI 380
+++ L+ + EA+ ++
Sbjct: 667 YNVVLSALSEAGRSEEAHNML 687
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 7/212 (3%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G+ P++ TYN ++ + C G ++LA M+R I P + L++ F + +
Sbjct: 237 FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQ 296
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM--LSRGIKPNLDTYKHL 293
KV++ M G + YN+ LC+ + +EA L D M LS + P++ TY L
Sbjct: 297 ATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL-PDVVTYNTL 355
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
+ K A +L M + G +P + LC+ G+ E AL +G
Sbjct: 356 VDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGL 415
Query: 354 VPHFSTMKSLVTGLASISKVAEA----NELIG 381
P T +L+ VA+A +E++G
Sbjct: 416 APDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 177 GIEPNSETYNKVIKSFCESGD-----SSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G+ P+ + N V+ + S S V+ L E+R + PN F LL+ +
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELR---LHPNHYTFNLLVHTHCSKG 222
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
D L M+ G++ YN + + C+ EA+ALL M GI P TY
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
L+ F + G ++ A K+ SMT G EPD + + LCQ G+ + A ++
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRL 335
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 111/275 (40%), Gaps = 39/275 (14%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ +++M + L S+ N L+ G C + + E + ++ K G+ P+ TYN +
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEK--GLVPDETTYNII 565
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I ++C+ GD + + +M S +P+ L+ G K + K+ + + G
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V YN IQS+CK+ + A D M +G++P+ TY ++ + G E A
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685
Query: 309 LFASMTNGGCEPDSYCFFMF-------------------------------TYF-----L 332
+ + + G S+ + TY L
Sbjct: 686 MLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGL 745
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
C GG+ + A V M KG ST +L+ GL
Sbjct: 746 CTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGL 780
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 23/195 (11%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
++ + L+G+ +D A++ FE + G + V N L+ + + F + +
Sbjct: 601 MNGLCLHGK---LDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM-E 656
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKS----------IRPNATDFGLLL 224
V G++P++ TYN V+ + E+G S +++L ++ ++P++ D
Sbjct: 657 VKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSAD----- 711
Query: 225 AGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK 284
KEH+ GK + + + Y R+ LC + +EAKA+LD M+ +G+
Sbjct: 712 EADVKEHE----GKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMP 767
Query: 285 PNLDTYKHLIHGFGK 299
+ TY L+ G K
Sbjct: 768 VDSSTYITLMEGLIK 782
>gi|18087879|gb|AAL59033.1|AC087182_16 hypothetical protein [Oryza sativa Japonica Group]
gi|31432747|gb|AAP54340.1| expressed protein [Oryza sativa Japonica Group]
Length = 428
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 14/268 (5%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A++ F D +S +L+ALL + ++VK +G+ P ++N
Sbjct: 134 DDALRAFS--DSAPAARSDVSLSALLSALFRAGRVDDVKSTLASAETSFGVAPGRASHNV 191
Query: 188 VIKSFCESGDSSSVYSILAEMRRK---SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
++ + ++ + ++ +L EM +K P+ + +LAG+ + E K+L+ +
Sbjct: 192 LLHALVKNSELAAARKLLGEMAKKLKHRPAPDIVSYNTVLAGYSAQGDEEGFEKLLKEIS 251
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ V YN RIQ K + + + LLD M S+ + PN TY L+ G+ KEGN+
Sbjct: 252 AKKLEPNVVTYNCRIQWFAKKGETFKGEELLDAMESKDVAPNYLTYNALVQGYCKEGNVG 311
Query: 305 GAKKLFASM---------TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
A ++F M ++ G S + + L + + AL +C++ A P
Sbjct: 312 SAMRVFKRMKVMKRREGRSDLGVSAHSQTYVVLFRSLVEKERLDDALWICKSCFAMKAAP 371
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
F +K LV GL K AEA +++ M
Sbjct: 372 PFEAVKGLVEGLVKGGKSAEAKDVVAKM 399
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+ I F D+ +S A R + +A LL+ ++ + +DV L E
Sbjct: 125 RAISLFPGPDDALRAFSDSAPAARSDVSLSA-----LLSALFRAGRVDDVKSTLASAETS 179
Query: 247 -GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIK----PNLDTYKHLIHGFGKEG 301
G+A G +N+ + +L K A+ LL G +++ +K P++ +Y ++ G+ +G
Sbjct: 180 FGVAPGRASHNVLLHALVKNSELAAARKLL-GEMAKKLKHRPAPDIVSYNTVLAGYSAQG 238
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ EG +KL ++ EP+ + + + GE ++ A +K P++ T
Sbjct: 239 DEEGFEKLLKEISAKKLEPNVVTYNCRIQWFAKKGETFKGEELLDAMESKDVAPNYLTYN 298
Query: 362 SLVTGLASISKVAEANELIGLMK 384
+LV G V A + MK
Sbjct: 299 ALVQGYCKEGNVGSAMRVFKRMK 321
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 153 LLGC-ILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
LLGC SK +KR+ + G+ +YN VI F ++G I+ EMR K
Sbjct: 396 LLGCKSSSKANHYLKRMVLD-----GLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREK 450
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
+ PN F L++G+ K + VL+M+ + G+ + + I LC + ++A
Sbjct: 451 GVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDA 510
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
+ M G++PN TY L+H G++ A L M G PD+Y F
Sbjct: 511 FDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILS 570
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
C+ + + A + A + G VP T SL+ L ++ EA E++ LM+
Sbjct: 571 FCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLME 623
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 1/200 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + +A +D A + +EM + G+ ++ N L+ G N K + + +G
Sbjct: 428 IDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLME-HG 486
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ T+ +I C + + EM +RPNA + +L+
Sbjct: 487 LIPDIITFTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAI 546
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+L M+K GI +N I S C++K+ ++A+ + + ML G+ P+ TY LI
Sbjct: 547 DLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKAL 606
Query: 298 GKEGNLEGAKKLFASMTNGG 317
E ++ AK++ M + G
Sbjct: 607 CDERRIDEAKEILLLMESSG 626
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 107/266 (40%), Gaps = 1/266 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I +G+ + +A + F +M + GLR S NAL++ + + + F + P G
Sbjct: 148 IASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMP-ADG 206
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+P+ TYN ++ C+ G ++ +M IRPN + +L+ GF + ED
Sbjct: 207 CQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAV 266
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
V M++ G++ Y + + +A +L L R P+ ++ +++
Sbjct: 267 HVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCL 326
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K + ++ M + G D+ F + + E + + KG P F
Sbjct: 327 SKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGF 386
Query: 358 STMKSLVTGLASISKVAEANELIGLM 383
++ L ++AN + M
Sbjct: 387 DVYIMVIKSLLGCKSSSKANHYLKRM 412
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F + P++ G+ P++ YN +I + +G + Y +M +P+ + L+ G
Sbjct: 163 VFVQMPRL-GLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGV 221
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+ ++ ++++ ME GI V Y + + C R E+A + D M +G+ PN
Sbjct: 222 CQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNE 281
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNG-GCEPDSY--CFFMFTYFLCQGGEYETALKV 344
+Y+ L+HG + G K + +T G EP + + Y L + + ++V
Sbjct: 282 ASYRTLVHGAFR---CLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEV 338
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGD 392
+ ++G++ + +V+ K E ++L GL+ K G+
Sbjct: 339 TKKMNSRGYLLDNAIFGIVVS---CAVKCLELSDLCGLLDDFVKKGGN 383
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M G+ SGV YN+ I K ++A ++ M +G+ PNL T+ LI G+ K
Sbjct: 409 LKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSK 468
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK-GWVPHFS 358
GN+ AK + + G PD F LC + + A C MA+ G P+
Sbjct: 469 LGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAFD-CFNEMAEWGVRPNAH 527
Query: 359 TMKSLVTGLASISKVAEANELIGLMKK 385
T L+ L S V +A +L+ MKK
Sbjct: 528 TYNVLMHALCSAGHVNKAIDLLNKMKK 554
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 114/297 (38%), Gaps = 39/297 (13%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
VH + Q +ID A++ +M+ G+R +V L+ G + E+ +F K
Sbjct: 218 VHGVC---QRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTM-K 273
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ PN +Y ++ Y +L E + P+ + + +L K +
Sbjct: 274 EKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAK 333
Query: 235 DVGKV--------------------------LQMMEKCGIAS---------GVNVYNIRI 259
+V +V L++ + CG+ G +VY + I
Sbjct: 334 EVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVI 393
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
+SL K S +A L M+ G+ + +Y +I F K G ++ A ++ M G
Sbjct: 394 KSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKGVL 453
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
P+ F + G A V + M G +P T SL+ GL ++ +A
Sbjct: 454 PNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDA 510
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%)
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
CG + I S +L ++ A + M G++P+ Y LI + G ++
Sbjct: 135 CGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDT 194
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A F M GC+PD + + + +CQ G + AL++ R G P+ T LV
Sbjct: 195 AYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVD 254
Query: 366 GLASISKVAEANELIGLMKKR 386
G + + +A + MK++
Sbjct: 255 GFCNAGRPEDAVHVFDTMKEK 275
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 127/295 (43%), Gaps = 23/295 (7%)
Query: 96 QLLEELK---TRPDLRQNERFHVHSIVLYGQANMID-HAMQTFEEMDKYGLRQSVDALNA 151
+ +E+K PDL E +H+ L M + HA+ F M + N
Sbjct: 113 EFFKEMKASGVEPDL---ESYHILLSALSDSGRMAEAHAL--FSAMT---CSPDIMTYNV 164
Query: 152 LLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
L+ G C + + YE + + E K G EPN TY+ +I +C+ + + +M
Sbjct: 165 LMDGYCKIGQTYE-AQSLMKEILKA-GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 222
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE- 269
+ PNA F L+AGF K ED K+ MEK G + + YN I SLCK KR
Sbjct: 223 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK-KRGGV 281
Query: 270 -EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMF 328
A L + + G+ P + TY LI GF + N +L M GC+PD +
Sbjct: 282 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITYNCL 339
Query: 329 TYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
LC E A ++ P+ +T L+ GL + KV EA ++ M
Sbjct: 340 ISGLCSANRVEDAQRLFN---GMACAPNVTTFNFLIRGLCAQKKVEEARNILDRM 391
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 13/261 (4%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A++ F+E+ + N L+ G + +F++ K G+ PN+ T N
Sbjct: 7 DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM-KSSGLLPNASTMNT 65
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM---ME 244
++ CE G SS + EM+ P + +LL GF+ G+ ++ M+
Sbjct: 66 LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFM------AGRAIEFFKEMK 119
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ + Y+I + +L R EA AL M P++ TY L+ G+ K G
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTY 176
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A+ L + G EP+ + + + C+ + E A +V + VP+ T +L+
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236
Query: 365 TGLASISKVAEANELIGLMKK 385
G + +A +L M+K
Sbjct: 237 AGFCKAGMLEDAIKLFAEMEK 257
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 9/222 (4%)
Query: 159 SKNYEEVKRIFTEFPKVYGI-EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNA 217
++ +++ R+F E + G+ PN+ TYN +I+ FC+ G S+ ++M+ + PNA
Sbjct: 3 ARKHDQALRLFKEV--LAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNA 60
Query: 218 TDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDG 277
+ LL G + + K+ + M+ +NI ++ R+ E
Sbjct: 61 STMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKE 117
Query: 278 MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGE 337
M + G++P+L++Y L+ G + A LF++MT C PD + + C+ G+
Sbjct: 118 MKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQ 174
Query: 338 YETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A + + + G+ P+ T ++ + KV EA E+
Sbjct: 175 TYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEV 216
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 40/212 (18%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-- 175
I + +A M++ A++ F EM+K G + ++ N L+ L K V F K+
Sbjct: 236 IAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDS--LCKKRGGVYTAVDLFNKLEG 293
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
G+ P TYN +I+ F E + +L M + +P+ + L++G ++ ED
Sbjct: 294 AGLTPTIVTYNSLIQGFSERANDG--LRLLCHMHAEGCKPDVITYNCLISGLCSANRVED 351
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLD------------------- 276
++ M A V +N I+ LC K+ EEA+ +LD
Sbjct: 352 AQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDMTTFNTIILAFCK 408
Query: 277 ------------GMLSRGIKPNLDTYKHLIHG 296
ML G PN T L HG
Sbjct: 409 AGAMHDAREVMKDMLKHGFYPNTYTTYALAHG 440
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 145/353 (41%), Gaps = 46/353 (13%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYGQANM--ID 128
D AF+I + L + ++ E++ +PD+ ++I+++G + D
Sbjct: 113 DIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVV------TYTIIIHGVCKIKKFD 166
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A+Q + +M G A A+++G + + + + K ++ ++ YN +
Sbjct: 167 TAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNAL 226
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I FC +G +I + MRR P+ + + L F E +D K+L++ME+ GI
Sbjct: 227 ISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGI 286
Query: 249 ASGVNVYN-----------------------------------IRIQSLCKLKRSEEAKA 273
V YN I++ CK+ + A
Sbjct: 287 EPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYK 346
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
L + M +GI P++ T+ I F +G+ AKKL MT G PD + LC
Sbjct: 347 LFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLC 406
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G+ E A + + +G P + +L+ G S+V+EA L M+ R
Sbjct: 407 KSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNR 459
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 12/299 (4%)
Query: 73 LDRMAFSIAVSKLSQANHFN---AISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
L + ++ +S +A + AI + PDL F + + M+D
Sbjct: 218 LSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVF----LNYFCDELMLDD 273
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE--FPKVYGIEPNSETYNK 187
A + + M++ G+ V + N LL G ++ + T +PK G+ + +YN
Sbjct: 274 AKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPK--GL-CDVVSYNT 330
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+IK+FC+ GD++S Y + EM +K I P+ F + + F + + K+L M + G
Sbjct: 331 IIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMG 390
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
++ Y I LCK + E A ++ M+ +GI P++ ++ LI+GF K + A
Sbjct: 391 LSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAM 450
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
L+ M N G PD + + L + + A V M KG+ + ++L+ G
Sbjct: 451 HLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 39/285 (13%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQ-SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIE 179
Y +A +ID A+Q F+EM + R S+D +G +++ + ++ + G
Sbjct: 19 YVKAGLIDKAVQVFDEMSQSNCRVFSIDY--NRFIGVLINHSRFDLANHYYSQMGTRGFS 76
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
+S TY++ I C+ + + + +L +M + P+ F + L + E + + +V
Sbjct: 77 LSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEV 136
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN------------- 286
+ + K G V Y I I +CK+K+ + A M+ +G P+
Sbjct: 137 FEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCD 196
Query: 287 -----------LD------------TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSY 323
+D Y LI GF + G ++ A+ + + M GCEPD
Sbjct: 197 GRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLV 256
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ +F + C + A K+ + G P + L+ G+
Sbjct: 257 TYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGIC 301
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y I + ++G + EM + + R + D+ + +++ M
Sbjct: 12 YRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMG 71
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G + Y+ I LCK+K LL M + P++ + +H EG ++
Sbjct: 72 TRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRID 131
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A ++F + G +PD + + + +C+ +++TA++ R + KG+ P ++V
Sbjct: 132 LALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIV 191
Query: 365 TGLASISKVAEANELI 380
GL KV A ELI
Sbjct: 192 VGLCDGRKVDLAYELI 207
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 164/357 (45%), Gaps = 12/357 (3%)
Query: 44 ATIARLKSESNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKT 103
+ I +K E +P L+I S + ++ + KL++ N+F+A+ ++L ++ T
Sbjct: 95 SAIDLIKREKDPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQM-T 153
Query: 104 RPDLRQNERFHVHSIVLYGQANMID---HAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
+ +E V+ + + ++++ + HA + + + + + S AL+ L + S
Sbjct: 154 YETCKFHEGIFVNLMKHFSKSSLHEKLLHAYFSIQPIVRE--KPSPKALSTCLNLLLDSN 211
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIR-PNATD 219
+ +++ + +PN +N ++K C++GD S + I+ EMR PN
Sbjct: 212 RVDLARKLLLHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVT 271
Query: 220 FGLLLAGFYKEHKYEDVGKVL-QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
+ L+ G + + ++ + +M+ + I YN+ I C+ + + A+ ++ M
Sbjct: 272 YSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFM 331
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
S G PN+ Y L+ G K G LE AK + A + G +PD+ + FLC+ G+
Sbjct: 332 KSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKS 391
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWN 395
+ A+++ G T L+ GL K EA +++ ++ P+ G N
Sbjct: 392 DEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMV----EKLPQQGVYLN 444
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 6/326 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTF 134
A S ++ L +N + +LL L + DL + V +I++ + + +D A +
Sbjct: 199 ALSTCLNLLLDSNRVDLARKLL--LHAKRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIV 256
Query: 135 EEMDKYGLR-QSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
EEM ++ + L+ G + +E +F E I P+ TYN +I FC
Sbjct: 257 EEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFC 316
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G +++ M+ PN ++ L+ G K K ED VL ++ G+
Sbjct: 317 RGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAV 376
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y I LC+ +S+EA LL+ M G + + T+ L+ G +EG E A + +
Sbjct: 377 TYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKL 436
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
G + + + L Q E + A ++ + +G+ PH++T L+ L V
Sbjct: 437 PQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMV 496
Query: 374 AEAN-ELIGLMKKRFPKSGDMWNAAL 398
+A L L++ F + W +
Sbjct: 497 DDAAVALFDLVEMGFQPGLETWEVLI 522
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 7/262 (2%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFE 135
+ +S + L + L EE+ +R + + + I + + D A +
Sbjct: 270 VTYSTLMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQ 329
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
M G +V +AL+ G E+ K + E K G++P++ TY +I C +
Sbjct: 330 FMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEI-KGSGLKPDAVTYTSLINFLCRN 388
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G S +L EM+ + ++ F +LL G +E K+E+ +++ + + G+ Y
Sbjct: 389 GKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSY 448
Query: 256 NIRIQSL---CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
I + SL C+LKR AK LL ML RG +P+ T L+ K G ++ A
Sbjct: 449 RIVLNSLTQKCELKR---AKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFD 505
Query: 313 MTNGGCEPDSYCFFMFTYFLCQ 334
+ G +P + + +C+
Sbjct: 506 LVEMGFQPGLETWEVLIGLICR 527
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A++ EEM + G + N LL G +EE + + P+ G+ N +Y
Sbjct: 392 DEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQ-QGVYLNKGSYRI 450
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
V+ S + + +L M R+ +P+ LL K +D L + + G
Sbjct: 451 VLNSLTQKCELKRAKELLGLMLRRGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMG 510
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
G+ + + I +C+ ++ LLD ++
Sbjct: 511 FQPGLETWEVLIGLICRERKLLYVFELLDELV 542
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 138/325 (42%), Gaps = 5/325 (1%)
Query: 66 SLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHV--HSIVLYG- 122
S+ E + + ++ V+ L +AN + +L ++++ R + V +S V+
Sbjct: 59 SMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDAL 118
Query: 123 -QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
+A +D A + F+ M G +V ++L+ G +E + + K + P
Sbjct: 119 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQL-KGEDMVPR 177
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
+ YN V+ F G S +L M+ K N DF +L +K + E + +
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+ K G V YN+ + LCK + +EA +L M+ + P++ TY +I GF K G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ A +F M C P F + + + A +V + G++P T
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357
Query: 362 SLVTGLASISKVAEANELIGLMKKR 386
L+ + V A E+ MK++
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRK 382
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 20/268 (7%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A Q FE + K G + +V N + G + +E RI E + + P+ TY+
Sbjct: 230 EKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVE-SKVTPDVITYSS 288
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I FC++G + M P+ F LL GF + K + +V + M G
Sbjct: 289 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 348
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
G+ YN+ + +C E A + M + +P+ +TY LI + ++ AK
Sbjct: 349 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAK 408
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETA-------LKVCRAS------------ 348
+ M P+ LC+ GE + A +++C+A
Sbjct: 409 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQM 468
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ KG P +T +++ L + +V A
Sbjct: 469 VLKGVRPDEATYVAVLRSLCGLDRVDSA 496
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 31/316 (9%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
+ +++AV L +A + ++L E+ K PD+ +S ++ G +A +D A
Sbjct: 249 VTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVI------TYSSIIDGFCKAGRMDKA 302
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
F M + LL G K E R+ + G P +TYN ++
Sbjct: 303 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA-GFIPGLQTYNVLMD 361
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C + S I +M+RK +P+A + L+ + + ++ + L +ME +
Sbjct: 362 CVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVP 421
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDG-------------------MLSRGIKPNLDTYK 291
+ + ++ LCK +EA ++LD M+ +G++P+ TY
Sbjct: 422 NGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYV 481
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAK 351
++ ++ A F M + GC P + + C + A ++ A +A
Sbjct: 482 AVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAA 541
Query: 352 GWVPHFSTMKSLVTGL 367
G+ P TM++L + L
Sbjct: 542 GFTPQAQTMRTLSSCL 557
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM- 243
Y VI FC++G + +L EM+ + ++ + L+ G ++ + ++ + + M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSR-----GIKPNLDTYKHLIHGFG 298
E+C + V YN + LCK R +E L D M R G +P++ +Y +I
Sbjct: 62 EEC--SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K ++ A + F M GC P+ + LC+ + A + + VP
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
++V G K +E EL+ MK++
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEK 207
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 39/170 (22%)
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIK----------------------------- 284
+Y I CK + ++A LLD M RG+K
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 285 -----PNLDTYKHLIHGFGKEGNLEGAKKLFASM-----TNGGCEPDSYCFFMFTYFLCQ 334
PN+ TY +++G K ++ +LF M + GCEPD + LC+
Sbjct: 61 GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ A + + A G P+ T SL+ GL + +V EA L+ +K
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLK 170
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 107/221 (48%), Gaps = 1/221 (0%)
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+PN E YN +I + C+ S Y + +EM K I + + L+ GF K ++
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIG 255
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
+L M I V YNI + +LCK + +EAK +L ML +KP++ TY L+ G+
Sbjct: 256 LLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
L+ A+ +F +M+ G PD + + + C+ + AL + + K VP
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR-FPKSGDMWNAAL 398
T SL+ GL +++ +LI M+ R P + +N+ +
Sbjct: 376 TYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLI 416
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 111/264 (42%), Gaps = 38/264 (14%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPNSET 184
++ A F EM G+ V L+ G CI SK E + + K I PN T
Sbjct: 214 LVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT--INPNVYT 271
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
YN ++ + C+ G ++LA M + ++P+ + L+ G++ ++ + V M
Sbjct: 272 YNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMS 331
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEA-------------------KALLDG-------- 277
G+ V+ Y I I CK K +EA +L+DG
Sbjct: 332 LMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391
Query: 278 --------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
M RGI N+ TY LI G K G+L+ A LF M + G P S+ F +
Sbjct: 392 YVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILL 451
Query: 330 YFLCQGGEYETALKVCRASMAKGW 353
LC+GG + A + + + KG+
Sbjct: 452 DGLCKGGRLKDAQEAFQDLLTKGY 475
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 5/227 (2%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F M G+ V + L+ G +K +E +F E + + P TY+ +I
Sbjct: 323 AQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQ-KNMVPGIVTYSSLI 381
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+SG S V+ ++ EMR + I N + L+ G K + + M+ GI
Sbjct: 382 DGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIR 441
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH--LIHGFGKEGNLEGAK 307
+ I + LCK R ++A+ +L++G +LD YK+ +I+G K+G LE A
Sbjct: 442 PCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGY--HLDVYKYNVMINGHCKQGLLEEAL 499
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ + M GC P++ F + L + E + A K+ R + +G +
Sbjct: 500 TMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 1/260 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+ A M K ++ V + L+ G L ++ + +F + G+ P+ +Y
Sbjct: 285 VKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAM-SLMGVTPDVHSYT 343
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC++ ++ EM +K++ P + L+ G K + V ++ M
Sbjct: 344 ILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDR 403
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
GI + V YN I LCK + A AL + M +GI+P T+ L+ G K G L+ A
Sbjct: 404 GIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDA 463
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
++ F + G D Y + + C+ G E AL + G VP+ T ++
Sbjct: 464 QEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINA 523
Query: 367 LASISKVAEANELIGLMKKR 386
L + +A +L+ M R
Sbjct: 524 LFKKDENDKAEKLLRQMICR 543
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 8/213 (3%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GI+P+ T N +I FC G + +S+LA++ ++ +P+ F L+ G + + V
Sbjct: 89 GIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQ---V 145
Query: 237 GKVLQMMEKCGIASGVNV----YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
K L +K +A G+ Y I +CK+ + A L+ + R KPN++ Y
Sbjct: 146 NKALHFHDKL-LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNT 204
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I K + A LF+ MT G D + Y C + + A+ + + K
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKT 264
Query: 353 WVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P+ T LV L KV EA ++ +M K
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLK 297
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G +P++ T+ +IK C G + ++ + I+ + +G L+ G K
Sbjct: 124 GYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGA 183
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
K+++ ++ V +YN I +LCK + EA L M ++GI ++ TY LI+G
Sbjct: 184 IKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYG 243
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-P 355
F L+ A L M P+ Y + + LC+ G+ + A V A M K V P
Sbjct: 244 FCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVL-AVMLKACVKP 302
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLM 383
T +L+ G + ++ +A + M
Sbjct: 303 DVITYSTLMDGYFLVYELKKAQHVFNAM 330
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
I + +EM G+ +V N+L+ G + + + +F + K GI P S T+
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKM-KDQGIRPCSFTFT 448
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
++ C+ G ++ K + + +++ G K+ E+ +L ME+
Sbjct: 449 ILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEEN 508
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
G ++I I +L K +++A+ LL M+ RG+
Sbjct: 509 GCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 3/266 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D + K G R A LL G K + I G PN
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 183 ETYNKVIKSFCESGDSSSVYSIL---AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
+YN ++K C+ S +L A+ R P+ + ++ GF+KE +
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M GI V YN I +LCK + ++A +L+ M+ G+ P+ TY ++HG+
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A M + G EPD + + +LC+ G A K+ + +G P +T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+L+ G A+ + E + L+ LM +
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVR 364
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A T+ EM G+ V N+++ ++ ++ + K G+ P+ TYN
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYNS 271
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ +C SG L +MR + P+ + LL+ K + + K+ M K G
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + Y +Q E LLD M+ GI P+ + LI + K+G ++ A
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAM 391
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+F+ M G P++ + LC+ G E A+ + +G P SL+ GL
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 368 ASISKVAEANELIGLMKKR 386
+ +K A ELI M R
Sbjct: 452 CTCNKWERAEELILEMLDR 470
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F+ M K GL+ + LL G E+ + + GI P+ ++ +
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPDHYVFSIL 377
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I ++ + G + ++MR++ + PNA +G ++ K + ED + M G+
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ G VYN I LC + E A+ L+ ML RGI N + +I KEG + ++K
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M G +P+ + C G+ + A+K+ ++ G P+ T +L+ G
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 369 SISKVAEA 376
IS++ +A
Sbjct: 558 KISRMEDA 565
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 8/229 (3%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+V SI++ Y + +D AM F +M + GL + A++ G + E ++ E
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI-GILCKSGRVEDAMLYFE 430
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G+ P + YN +I C ++ EM + I N F ++ KE
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + K+ ++M + G+ V YN I C + +EA LL GM+S G+KPN TY
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
LI+G+ K +E A LF M + G PD + TY + G ++T
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPD-----IITYNIILQGLFQT 594
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPN 181
+A +D AM+ M K G+ N++L G C + E + F + + G+EP+
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG--FLKKMRSDGVEPD 300
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TY+ ++ C++G I M ++ ++P T +G LL G+ + ++ +L
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+M + GI V++I I + K + ++A + M +G+ PN TY +I K G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+E A F M + G P + + + LC ++E A ++ + +G +
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
S++ +V E+ +L LM +
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVR 504
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 140/340 (41%), Gaps = 35/340 (10%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D FSI + ++ + + +++ + L N + I + ++ ++ AM
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQ-GLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF--------------------- 172
FE+M GL N+L+ G +E + + E
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 173 -------PKVY------GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATD 219
K++ G++PN TYN +I +C +G +L+ M ++PN
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVT 548
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
+ L+ G+ K + ED + + ME G++ + YNI +Q L + +R+ AK L +
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRIT 608
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
G + L TY ++HG K + A ++F ++ + ++ F + L + G +
Sbjct: 609 ESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRND 668
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
A + A + G VP++ T + + + + E ++L
Sbjct: 669 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 36/243 (14%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FE M + G++ +V N L+ G L+ +E ++ + V G++PN+ TY+ +I +C
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV-GLKPNTVTYSTLINGYC 557
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + EM + P+ + ++L G ++ + ++ + + G ++
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 254 VYNIRIQSLCKLK-----------------------------------RSEEAKALLDGM 278
YNI + LCK K R++EAK L
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
S G+ PN TY+ + +G LE +LF SM + GC DS L Q GE
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737
Query: 339 ETA 341
A
Sbjct: 738 TRA 740
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 3/266 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D + K G R A LL G K + I G PN
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 183 ETYNKVIKSFCESGDSSSVYSIL---AEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
+YN ++K C+ S +L A+ R P+ + ++ GF+KE +
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
M GI V YN I +LCK + ++A +L+ M+ G+ P+ TY ++HG+
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G + A M + G EPD + + +LC+ G A K+ + +G P +T
Sbjct: 279 SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 360 MKSLVTGLASISKVAEANELIGLMKK 385
+L+ G A+ + E + L+ LM +
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVR 364
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 1/259 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A T+ EM G+ V N+++ ++ ++ + K G+ P+ TYN
Sbjct: 213 DKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYNS 271
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
++ +C SG L +MR + P+ + LL+ K + + K+ M K G
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG 331
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ + Y +Q E LLD M+ GI P+ + LI + +G ++ A
Sbjct: 332 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAM 391
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
+F+ M G P++ + LC+ G E A+ + +G P SL+ GL
Sbjct: 392 LVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 451
Query: 368 ASISKVAEANELIGLMKKR 386
+ +K A ELI M R
Sbjct: 452 CTCNKWERAEELILEMLDR 470
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 1/248 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A + F+ M K GL+ + LL G E+ + + GI P+ ++ +
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPDHYVFSIL 377
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I ++ G + ++MR++ + PNA +G ++ K + ED + M G+
Sbjct: 378 ICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ G VYN I LC + E A+ L+ ML RGI N + +I KEG + ++K
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M G +P+ + C G+ + A+K+ ++ G P+ T +L+ G
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 369 SISKVAEA 376
IS++ +A
Sbjct: 558 KISRMEDA 565
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 8/229 (3%)
Query: 114 HVHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
+V SI++ AN +D AM F +M + GL + A++ G + E ++ E
Sbjct: 372 YVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI-GILCKSGRVEDAMLYFE 430
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
G+ P + YN +I C ++ EM + I N F ++ KE
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ + K+ ++M + G+ V YN I C + +EA LL GM+S G+KPN TY
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
LI+G+ K +E A LF M + G PD + TY + G ++T
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPD-----IITYNIILQGLFQT 594
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 3/264 (1%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPKVYGIEPN 181
+A +D AM+ M K G+ N++L G C + E + F + + G+EP+
Sbjct: 243 KAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIG--FLKKMRSDGVEPD 300
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TY+ ++ C++G I M ++ ++P T +G LL G+ + ++ +L
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
+M + GI V++I I + + ++A + M +G+ PN TY +I K G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+E A F M + G P + + + LC ++E A ++ + +G +
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
S++ +V E+ +L LM +
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVR 504
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 112/237 (47%), Gaps = 8/237 (3%)
Query: 149 LNALLLGCILSKNYEEVKRIFTEFPKVY------GIEPNSETYNKVIKSFCESGDSSSVY 202
LN + I+ + +E + I +E K++ G++PN TYN +I +C +G
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESE--KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 203 SILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
+L+ M ++PN + L+ G+ K + ED + + ME G++ + YNI +Q L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+ +R+ AK L + G + L TY ++HG K + A ++F ++ + ++
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
F + L + G + A + A + G VP++ T + + + + E ++L
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 36/243 (14%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FE M + G++ +V N L+ G L+ +E ++ + V G++PN+ TY+ +I +C
Sbjct: 499 FELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV-GLKPNTVTYSTLINGYC 557
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ + EM + P+ + ++L G ++ + ++ + + G ++
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 254 VYNIRIQSLCKLK-----------------------------------RSEEAKALLDGM 278
YNI + LCK K R++EAK L
Sbjct: 618 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 677
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
S G+ PN TY+ + +G LE +LF SM + GC DS L Q GE
Sbjct: 678 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEI 737
Query: 339 ETA 341
A
Sbjct: 738 TRA 740
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 114/300 (38%), Gaps = 42/300 (14%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETY 185
+ A F+E+ + G S+ LN L V R + + + P+ TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED-VGKVLQMME 244
+I C +G ++ L + +K R +A F LL G + + D + VL+ M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALL---------------------------DG 277
+ G V YNI ++ LC RS+EA LL +G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 278 -----------MLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
ML RGI P++ TY +I K ++ A ++ +M G PD +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ C G+ + A+ + + G P T L+ L + EA ++ M KR
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 136/299 (45%), Gaps = 11/299 (3%)
Query: 92 NAISQLLEELKTRPDLRQNERFHVHSIVLYGQAN--MIDHAMQTFEEMDKYG--LRQSVD 147
N + + EL P++ +SI+L G + M A+ F+ M K G +V
Sbjct: 213 NVLLHRMSELGCVPNVFS------YSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVV 266
Query: 148 ALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAE 207
A N ++ G + +F E + G++P+ TYN +I + C++ +L +
Sbjct: 267 AYNTVIHGFFKEGETGKACSLFHEMTR-QGVKPDVVTYNLIIDALCKARAMDKAELVLRQ 325
Query: 208 MRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKR 267
M +P+ + ++ G+ + ++ K+ + M+ G+ + + N + SLCK R
Sbjct: 326 MTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGR 385
Query: 268 SEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFM 327
S+EA + D M ++G KP++ +Y L+HG+ EG LF SM + G D F +
Sbjct: 386 SKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNI 445
Query: 328 FTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + G + A+ + +G P T ++++ + + ++ +A E M R
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 6/276 (2%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLR-QSVDALNALLLGCILSKNYEEVKRIFT 170
H +SI++ +A D + F + + GL+ + A L C ++ E V +
Sbjct: 158 HTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLH 217
Query: 171 EFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK--SIRPNATDFGLLLAGFY 228
++ G PN +Y+ ++K C++ S + M ++ + PN + ++ GF+
Sbjct: 218 RMSEL-GCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFF 276
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
KE + + M + G+ V YN+ I +LCK + ++A+ +L M + G +P+
Sbjct: 277 KEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY +IHG+ G L+ A K+F M + G P+ F LC+ G + A ++ +
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSM 396
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
AKG P + +L+ G AS A+ L MK
Sbjct: 397 TAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMK 432
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 111/262 (42%), Gaps = 2/262 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A +D A +M G + N ++ G +E ++F + K G+ PN
Sbjct: 312 KARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKM-KSRGLIPNI 370
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
N + S C+ G S I M K +P+ + LL G+ E + D+ +
Sbjct: 371 VICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNS 430
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M+ GIA+ V+NI I + K ++A + M +G+ P++ TY +I F + G
Sbjct: 431 MKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGR 490
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV-PHFSTMK 361
L A + F M G +P++ + C G A ++ + KG P
Sbjct: 491 LTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFN 550
Query: 362 SLVTGLASISKVAEANELIGLM 383
S++ L +V +A+++ L+
Sbjct: 551 SVINSLCKDGRVMDAHDIFDLV 572
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 133/285 (46%), Gaps = 9/285 (3%)
Query: 94 ISQLLEELKTRPDLRQNERFHVHSIV--LYGQANMIDHAMQTFEEMDKYGLRQSVDALNA 151
+S+++ + RPD+ +S++ L ++D A F+ + G R V +
Sbjct: 533 VSEMINKGIPRPDI-----VFFNSVINSLCKDGRVMD-AHDIFDLVTDIGERPDVITFTS 586
Query: 152 LLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRK 211
L+ G L ++ +I +V G+E + TY+ ++ + ++G + ++ EM+RK
Sbjct: 587 LIDGYCLVGKMDKAFKILDAM-EVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRK 645
Query: 212 SIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEA 271
++PN +G++LAG ++ + K M + G V++Y I + LC+ ++EA
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEA 705
Query: 272 KALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYF 331
L + + +K ++ +I+ K E AK+LFA+++ G P+ + +
Sbjct: 706 IILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIIN 765
Query: 332 LCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
L + G E A + + G VP + ++ L ++A+A
Sbjct: 766 LLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 85/208 (40%), Gaps = 26/208 (12%)
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGF---------------------YKEHKYEDVGKVL 240
YSIL + ++ RP D GL+L G Y E V +L
Sbjct: 160 YSILMDCCCRARRP---DLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLL 216
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG--IKPNLDTYKHLIHGFG 298
M + G V Y+I ++ LC S+ A L M G PN+ Y +IHGF
Sbjct: 217 HRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFF 276
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
KEG A LF MT G +PD + + LC+ + A V R G P
Sbjct: 277 KEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTV 336
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T ++ G A++ ++ EA ++ MK R
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSR 364
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/317 (19%), Positives = 136/317 (42%), Gaps = 9/317 (2%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQNERFHVHSIVLYGQANMIDHA 130
D + ++ + + +++ ++K+R P++ F + S+ +G++ A
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSF-LASLCKHGRSK---EA 389
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F+ M G + + + LL G + ++ +F K GI + +N +I
Sbjct: 390 AEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSM-KSNGIAADCRVFNILIH 448
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
++ + G I EM+++ + P+ + +++ F + + D + M GI
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQP 508
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI-KPNLDTYKHLIHGFGKEGNLEGAKKL 309
VY+ IQ C +AK L+ M+++GI +P++ + +I+ K+G + A +
Sbjct: 509 NTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDI 568
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
F +T+ G PD F C G+ + A K+ A G T +L+ G
Sbjct: 569 FDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFK 628
Query: 370 ISKVAEANELIGLMKKR 386
++ + L M+++
Sbjct: 629 NGRINDGLTLFREMQRK 645
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 106/262 (40%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I + + + AM+ F +M G++ + ++++ G + + K + +E
Sbjct: 482 ISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGI 541
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ +N VI S C+ G + I + RP+ F L+ G+ K +
Sbjct: 542 PRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAF 601
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
K+L ME G+ + + Y+ + K R + L M +G+KPN TY ++ G
Sbjct: 602 KILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGL 661
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ G A+K F M G + + LC+ + A+ + +
Sbjct: 662 FRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSI 721
Query: 358 STMKSLVTGLASISKVAEANEL 379
+ + +++ + + + EA EL
Sbjct: 722 TILNTMINAMYKVQRKEEAKEL 743
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 127/294 (43%), Gaps = 5/294 (1%)
Query: 100 ELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CIL 158
E+ + +NE + + I + + ID A++ F +M + G V L+ C +
Sbjct: 249 EIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEV 308
Query: 159 SKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT 218
K E +K F E GIEPN TY +I FC+ G +L+ M K + +
Sbjct: 309 GKETEALK--FFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVV 366
Query: 219 DFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGM 278
F L+ G+ K ED VL M+ + YN I C+ K + A ALL+ M
Sbjct: 367 PFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKM 426
Query: 279 LSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEY 338
+ PNL TY LIHG K ++ A +L M G PD F F LC+ G+
Sbjct: 427 YENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKV 486
Query: 339 ETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG--LMKKRFPKS 390
E A +V + K + +L+ G K ++A+ L L + FP S
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNS 540
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 4/290 (1%)
Query: 111 ERFHVHSIVL-YGQANMIDHAMQTFEEMDKYG-LRQSVDALNALLLGCILSKNYEEVKRI 168
+ F S++L Y + + + A + FE M + G LR V N + C + K E ++
Sbjct: 224 DSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELF 283
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
F K G P+ TY ++ +FCE G + EM I PN + +L+ F
Sbjct: 284 FQM--KEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFC 341
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K K ++ ++L M + G+ S V +N I CK E+A +LD M + PN
Sbjct: 342 KVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSR 401
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY LI GF ++ +++ A L M P+ + + LC+ ++A ++
Sbjct: 402 TYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLM 461
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+ G+VP T + + L + KV +A+++ +K++ ++ + AL
Sbjct: 462 IKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTAL 511
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 115/257 (44%), Gaps = 3/257 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALL-LGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ FEEM + G+ +V L+ C + K E ++ + T K G+ + +N +
Sbjct: 314 ALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK--GLVSSVVPFNAL 371
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I +C+ G +L M+ + PN+ + L+ GF ++ + +L M + +
Sbjct: 372 IDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKL 431
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ + YN I LCK + + A L M+ G P+ T+ I K G +E A +
Sbjct: 432 SPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQ 491
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+F S+ E + + + C+ ++ A + + + +G P+ T L+ GL
Sbjct: 492 VFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLR 551
Query: 369 SISKVAEANELIGLMKK 385
KV +A L+ +M K
Sbjct: 552 KEGKVEDAMSLVDVMGK 568
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 1/245 (0%)
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+A ++D A + M K G A + E+ ++F + + E N
Sbjct: 447 KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHA-EANE 505
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
Y +I +C++ S + + M + PN+ F +LL G KE K ED ++ +
Sbjct: 506 FLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDV 565
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M K V+ Y I I+ + + + A LD M+S G +PN+ TY I + ++G
Sbjct: 566 MGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGR 625
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
L A+++ + G DS+ + + G+ ++A V G P T
Sbjct: 626 LLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSI 685
Query: 363 LVTGL 367
L+ L
Sbjct: 686 LLKHL 690
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 107/258 (41%), Gaps = 1/258 (0%)
Query: 126 MIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETY 185
+ID F++M G+ ++ + N ++ N K F K +G +S TY
Sbjct: 170 LIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMK-FGFCCDSFTY 228
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
+I +C+ + Y + M ++ N + L+ GF + K ++ ++ M++
Sbjct: 229 TSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKE 288
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G V Y + + + C++ + EA + M+ GI+PN+ TY LI F K G ++
Sbjct: 289 DGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDE 348
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
++ ++M G F C+ G E A+ V + P+ T L+
Sbjct: 349 GMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELIC 408
Query: 366 GLASISKVAEANELIGLM 383
G + A L+ M
Sbjct: 409 GFCRKKSMDRAMALLNKM 426
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 4/245 (1%)
Query: 142 LRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSV 201
LR + + N+++ C+ S V + T + + +YN++ G +
Sbjct: 119 LRAAENVRNSMIKSCVSSHEARFVLNLLTH----HEFSLSVTSYNRLFMVLSRFGLIDEL 174
Query: 202 YSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQS 261
+ +M + PN F ++ K + K G Y I
Sbjct: 175 NCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILG 234
Query: 262 LCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPD 321
CK+ +A + + M G N +Y +LIHGF + G ++ A +LF M GC PD
Sbjct: 235 YCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPD 294
Query: 322 SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIG 381
+ + C+ G+ ALK + G P+ T L+ + K+ E E++
Sbjct: 295 VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS 354
Query: 382 LMKKR 386
M ++
Sbjct: 355 TMLEK 359
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 116/300 (38%), Gaps = 34/300 (11%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-----------CIL----------- 158
+ + +D M+ M + GL SV NAL+ G C+L
Sbjct: 340 FCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPN 399
Query: 159 SKNYEEV----------KRIFTEFPKVY--GIEPNSETYNKVIKSFCESGDSSSVYSILA 206
S+ Y E+ R K+Y + PN TYN +I C++ S + +
Sbjct: 400 SRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHH 459
Query: 207 EMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLK 266
M + P+ F + K K E +V + +++ + +Y I CK +
Sbjct: 460 LMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAE 519
Query: 267 RSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFF 326
+ +A L ML G PN T+ L+ G KEG +E A L M +P + +
Sbjct: 520 KFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYT 579
Query: 327 MFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + + +++ A ++ G P+ T + + ++ EA E++ +K+
Sbjct: 580 ILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEE 639
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 114/279 (40%), Gaps = 27/279 (9%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
++ AM + M K+ + +V L+ + +++ +F + G +PN TY
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRAN-MFLDQMISSGCQPNVVTYT 614
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNA-----------------TDFGLLLAGF-- 227
IK++C G ++ +++ + I ++ + FG+L+ F
Sbjct: 615 AFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDT 674
Query: 228 ---YKEHKYEDVGK--VLQMMEKCGIASGVNVYNIRIQS--LCKLKRSEEAKALLDGMLS 280
Y + K + + K G+ +N NI + + + K+ E L + M+
Sbjct: 675 GCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVE 734
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+G PN++TY LI G K +L A +LF M G P C+ G +E
Sbjct: 735 QGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEE 794
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
AL++ + M + H + K LV GL +A E+
Sbjct: 795 ALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEI 833
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 10/197 (5%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG +D A M G S + LL I K +E G++
Sbjct: 655 YGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGM----------GLDL 704
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
NS + + + D + + +M + PN + L+ G K ++
Sbjct: 705 NSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLF 764
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M++ GI+ N++N + S CKL EEA LLD M+ +L++YK L+ G ++
Sbjct: 765 NHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQ 824
Query: 301 GNLEGAKKLFASMTNGG 317
GN E A+++F S+ + G
Sbjct: 825 GNQEKAEEIFRSLLSCG 841
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
FE+M + G +V+ + L+ G ++ R+F K GI P+ +N ++ S C
Sbjct: 729 FEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHM-KESGISPSENIHNSLLSSCC 787
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G +L M + + + LL+ G +++ E ++ + + CG
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
V+ + + L + +E L D M G + + DT+ L
Sbjct: 848 VWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 3/293 (1%)
Query: 96 QLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLG 155
QL +++ T + RF + AN++D + + ++G R A N L+
Sbjct: 163 QLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSS 222
Query: 156 CILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRP 215
I +V +F + + P+ ++N VIK C G ++ M P
Sbjct: 223 LIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSP 282
Query: 216 NATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA-SGVNVYNIRIQSLCKLKRSEEAKAL 274
+ +++ G + ++ +VL+ +++ G+ V + I CK + E+A A+
Sbjct: 283 DTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 342
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ M++ GI PN TY LI+G+GK G+L A +++ MT C PD F C+
Sbjct: 343 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 402
Query: 335 GGEYETALKVCRASMAKGWV-PHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G+ + AL++ + MA+ + P+ T ++ L ++ EA L+ + R
Sbjct: 403 CGQLDDALRI-WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLR 454
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 2/264 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + +I V L + N + ++L L+ N I Y +A ++ AM
Sbjct: 283 DTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAV 342
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ +M G+ + N L+ G + ++ + ++ P+ T++ +I +C
Sbjct: 343 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLR-CPPDVVTFSSLIDGYC 401
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME-KCGIASGV 252
G I ++M + I+PN F +++ K+++ ++ ++L + + IA
Sbjct: 402 RCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQA 461
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+YN I LCK + +EA + GM +G +P+ TY LI G+ + + A F
Sbjct: 462 FIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHE 521
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGG 336
M GC PDS F L + G
Sbjct: 522 MVEAGCSPDSITVNCFISCLLKAG 545
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 17/318 (5%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYG--QANMID 128
D +F++ + + + +L+E E PD H+I++ G + N +
Sbjct: 248 DVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTV------THNIIVDGLCRTNEVS 301
Query: 129 HAMQTFEEMDKYGL-RQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ + + G+ +V +++ G + E+ ++ + GI PN+ TYN
Sbjct: 302 RGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDM-VASGIMPNTVTYNV 360
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I + + GD S + +M R P+ F L+ G+ + + +D ++ M +
Sbjct: 361 LINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHR 420
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGM-LSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
I V ++I I SLCK RS+EA LL+ + L I P Y +I K G ++ A
Sbjct: 421 IQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEA 480
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+ M GC PD Y + + C A+ + G P T+ ++
Sbjct: 481 NLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISC 540
Query: 367 LASISKVAEANELIGLMK 384
L K NE+ +M+
Sbjct: 541 LL---KAGMPNEVDHVMR 555
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y Q + A FE+M +R NAL+ G + E + + E K G++P
Sbjct: 380 YCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEK-SGVDP 438
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ ET+N +I ++ +G +++L++M+ K I+ N FG ++ F K K + +L
Sbjct: 439 SVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAIL 498
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M + VYN I + + +E+A L++ M S G+ ++ TY L+ G K
Sbjct: 499 DDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKN 558
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
++ A++L ++TN G PD + C G+ + AL++ + P T
Sbjct: 559 SQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTY 618
Query: 361 KSLVTGLASISKVAE 375
L++ L S +V +
Sbjct: 619 HPLLSALGSAGRVHD 633
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 1/247 (0%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP-NSETYNKVIKSFCESGDSS 199
G R A N + C+ + + +E + + G P ++ +YN VI SG S
Sbjct: 153 GARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 212
Query: 200 SVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRI 259
+ EM + + PN + ++ G K E ++ M + G V YN+ +
Sbjct: 213 DALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCE 319
LC+ R +E +AL+D M S + P+ TY L G + G+ LF G
Sbjct: 273 SGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332
Query: 320 PDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANEL 379
+Y + LC+ G+ A +V + G VP + +L+ G + + A +
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSI 392
Query: 380 IGLMKKR 386
MK R
Sbjct: 393 FEQMKSR 399
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 3/271 (1%)
Query: 117 SIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
SI+L G + + A Q E + GL + N L+ G ++ + IF + K
Sbjct: 339 SILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM-K 397
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
I P+ TYN +I C+ + ++ EM + + P+ F L+ + + + E
Sbjct: 398 SRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLE 457
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
VL M+ GI S V + +++ CK + EA A+LD M+ + + PN Y +I
Sbjct: 458 KCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSII 517
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
+ + G E A L M + G + + + LC+ + + A ++ +G
Sbjct: 518 DAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLR 577
Query: 355 PHFSTMKSLVTGLASISKVAEANELIGLMKK 385
P + ++++ + A EL+ M K
Sbjct: 578 PDVVSYNTIISACCNKGDTDRALELLQEMHK 608
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 6/307 (1%)
Query: 76 MAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDH--AMQT 133
+ +++ +S L +A + L++E+ + L +SI+ G D +
Sbjct: 266 VTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG---FTYSILFDGLTRTGDSRTMLSL 322
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F E K G+ + LL G + +++ E G+ P + YN +I +C
Sbjct: 323 FGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVL-EMLVHTGLVPTTAIYNTLINGYC 381
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ D +SI +M+ + IRP+ + L+ G K + ++ MEK G+ V
Sbjct: 382 QVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVE 441
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N I + + + E+ +L M +GIK N+ ++ ++ F K G + A + M
Sbjct: 442 TFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDM 501
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ P++ + + G E A + + G T L+ GL S++
Sbjct: 502 IHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQI 561
Query: 374 AEANELI 380
EA ELI
Sbjct: 562 DEAEELI 568
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 144/348 (41%), Gaps = 37/348 (10%)
Query: 72 PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAM 131
P D ++++ ++ L ++ + ++ +E+ R + N+ + I + + ++
Sbjct: 192 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDR-GVAPNQITYNTMIDGHVKGGDLEAGF 250
Query: 132 QTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
+ ++M + G + +V N LL G + +E + + E Y + P+ TY+ +
Sbjct: 251 RLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTS-YSMLPDGFTYSILFDG 309
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+GDS ++ S+ E +K + A +LL G K+ K +VL+M+ G+
Sbjct: 310 LTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 369
Query: 252 VNVYN--------------------------IR---------IQSLCKLKRSEEAKALLD 276
+YN IR I LCK++ EA+ L+
Sbjct: 370 TAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVM 429
Query: 277 GMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
M G+ P+++T+ LI +G+ G LE + + M + G + + F C+ G
Sbjct: 430 EMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNG 489
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+ A+ + + K VP+ S++ +A L+ MK
Sbjct: 490 KIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK 537
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 1/205 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
YG+A ++ +M G++ +V + +++ + E I + + P
Sbjct: 450 YGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIH-KDVVP 508
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N++ YN +I ++ ESG + + ++ +M+ + + + LLL G K + ++ +++
Sbjct: 509 NAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELI 568
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V YN I + C ++ A LL M I+P L TY L+ G
Sbjct: 569 YNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSA 628
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCF 325
G + + L+ M + EP S +
Sbjct: 629 GRVHDMECLYQHMVHKNVEPSSSIY 653
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 3/264 (1%)
Query: 124 ANMIDHAMQTFEEMDKYGLRQSVDAL--NALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
A +D A+ M + DA N ++ G S + ++F E G+ PN
Sbjct: 171 AGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD-RGVAPN 229
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN +I + GD + + + +M + +PN + +LL+G + + ++ ++
Sbjct: 230 QITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMD 289
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M + Y+I L + S +L L +G+ T L++G K+G
Sbjct: 290 EMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDG 349
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
+ A+++ + + G P + + CQ + + A + ++ P T
Sbjct: 350 KVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYN 409
Query: 362 SLVTGLASISKVAEANELIGLMKK 385
+L+ GL + + EA +L+ M+K
Sbjct: 410 ALINGLCKMEMITEAEDLVMEMEK 433
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEV 165
D+ N + + I Y ++ + A E+M G+ S+ N LL G + +E
Sbjct: 505 DVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEA 564
Query: 166 KRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLA 225
+ + G+ P+ +YN +I + C GD+ +L EM + IRP + LL+
Sbjct: 565 EELIYNLTN-QGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLS 623
Query: 226 GFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKL 265
+ D+ + Q M + ++Y R ++ K+
Sbjct: 624 ALGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKV 663
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ + M G + N ++ + ++ + + P G +PN+ YN V
Sbjct: 216 QALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPS-RGCKPNTVNYNTV 274
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+K FC IL EM R++ PN +++ ++ + V L+ M K G
Sbjct: 275 LKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGC 334
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ V YN I +C+ + A LL M S G KP++ TY ++ G E A++
Sbjct: 335 TANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEE 394
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M+ PD+ F F CQ G A +V + KG P+ +T +++ GL
Sbjct: 395 LMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLT 454
Query: 369 SISKVAEANELIGLMKKRFPKSGDMW 394
K+ +A EL+ M + + M+
Sbjct: 455 KAGKMEQALELLNEMANKGFNTDKMY 480
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 7/208 (3%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNAT--DFGLLLAGFYKEHKYEDVG 237
P+ N++++ C G + ++ ++ P AT +G L+ G+ + ED
Sbjct: 94 PDVPLANRLVRDLCRRGRPADAARVV-----EACGPEATAATYGALVDGYCRAGLLEDAR 148
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+V+ M AS +N I +LC+ R +A +LDGML RG P++ TY L+
Sbjct: 149 RVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAA 208
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
K A +L M GCEP++ + + +C+ G+ + A ++ + ++G P+
Sbjct: 209 CKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNT 268
Query: 358 STMKSLVTGLASISKVAEANELIGLMKK 385
+++ G SI + +A+E++ M +
Sbjct: 269 VNYNTVLKGFCSIERWVDADEILDEMVR 296
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 2/202 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A++ M +G + + N +L G + +E+ + + + + + P++ T+N
Sbjct: 354 VDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL-PDNSTFN 412
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I +C+ G + + +M K PN+T + ++ G K K E ++L M
Sbjct: 413 TIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANK 472
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G + +Y + +SL K + EE ++ + GI P Y ++ G + G + A
Sbjct: 473 GFNTD-KMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYA 531
Query: 307 KKLFASMTNGGCEPDSYCFFMF 328
+ A M + GC PD + +
Sbjct: 532 IDVLADMVSCGCMPDESTYIIL 553
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 123/341 (36%), Gaps = 78/341 (22%)
Query: 115 VHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPK 174
+H++ G+ + A+ + M G V N LL + Y + + +F +
Sbjct: 170 IHALCERGR---VADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELI-DFMR 225
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G EPN+ TYN +I + C GD +L + + +PN ++ +L GF ++
Sbjct: 226 AEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWV 285
Query: 235 DVGKVLQMM--EKC---------------------------------GIASGVNVYNIRI 259
D ++L M E C G + V YN I
Sbjct: 286 DADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVI 345
Query: 260 QSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL---------- 309
+C+ + A LL M S G KP++ TY ++ G E A++L
Sbjct: 346 SGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRL 405
Query: 310 -------------------------FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
F M GC P+S + L + G+ E AL++
Sbjct: 406 PDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALEL 465
Query: 345 CRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
KG F+T K S++K + E++ ++ K
Sbjct: 466 LNEMANKG----FNTDKMYRVLTESLNKEDKIEEVVQVVHK 502
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 91/222 (40%), Gaps = 1/222 (0%)
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
E+ +R+ P + ++ +N +I + CE G + +L M + P+ + +
Sbjct: 145 EDARRVVGGMP-AHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNI 203
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRG 282
LL K Y +++ M G YN+ I ++C+ ++A+ LL+ + SRG
Sbjct: 204 LLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRG 263
Query: 283 IKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETAL 342
KPN Y ++ GF A ++ M C P+ + LC+ G +
Sbjct: 264 CKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVT 323
Query: 343 KVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
G + T ++++G+ V A EL+ M+
Sbjct: 324 LYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQ 365
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 6/184 (3%)
Query: 206 AEMRRKSIRPNATDFGL---LLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSL 262
A +R P D L L+ + + D +V+ E CG + Y +
Sbjct: 82 AALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVV---EACGPEATAATYGALVDGY 138
Query: 263 CKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
C+ E+A+ ++ GM + + + LIH + G + A + M GC PD
Sbjct: 139 CRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDV 198
Query: 323 YCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGL 382
+ + C+G Y AL++ A+G P+ T ++ + V +A EL+
Sbjct: 199 VTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNS 258
Query: 383 MKKR 386
+ R
Sbjct: 259 LPSR 262
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ +YN VI+ FCE + + EM+ + +G+L+ F K K ++
Sbjct: 175 PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGF 234
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M+ G+ + + VY I+ C + KAL D +L RG P TY LI GF K
Sbjct: 235 LKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
G L+ A ++F M G P+ Y + LC G+ + AL++ + K P+ T
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR 386
++ L VA+A E++ LMKKR
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELMKKR 381
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
I NS+TY +I FC++G + +L +MR ++P+ D+ LL+ KE +
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
++ + M++ V +NI I K + A++LL GM G+ P+L TY LI+ F
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSY-CFFMFTYFLCQG 335
K G L+ A F M + G EPD++ C + Y + QG
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 169 FTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFY 228
F + K G+E + Y +I+ FC+ G+ ++ E+ + P A + L+ GF
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 229 KEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLD 288
K + ++ ++ + M + G+ V Y I LC + +++EA LL+ M+ + +PN
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY +I+ K+G + A ++ M PD+ + + LC G+ + A K+
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 349 MAKGWV--PHFSTMKSLVTGLASISKVAEANELIGLMKKRFPKSGD 392
+ P + +L+ GL +++ +A ++ L+ ++ +GD
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG-AGD 458
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 74/194 (38%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK 245
N ++ S + +S +M N LL + + K VL +M K
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 246 CGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEG 305
G A V +NI ++ LC+ +A +LL M + P++ +Y +I GF + LE
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 306 AKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
A +L M GC + + C+ G+ + A+ + G SL+
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 366 GLASISKVAEANEL 379
G ++ L
Sbjct: 256 GFCDCGELDRGKAL 269
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 12/306 (3%)
Query: 53 SNPFRILDICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTR---PDLRQ 109
S+ R+ D G P D + ++ ++ L + LL E++ R PDL
Sbjct: 33 SDALRVRDEMVGCGCLP----DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCT 88
Query: 110 NERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIF 169
+H + G+ +D A+Q F+ M LR + N L+ G + ++ ++
Sbjct: 89 FTTL-IHGYCIEGK---LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLW 144
Query: 170 TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYK 229
+ I PN TY+ +I S CE G + L EM K I PN + ++ G+ +
Sbjct: 145 DDMHS-REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCR 203
Query: 230 EHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDT 289
K LQ M ++ + YN I K + +A LL+ M ++P++ T
Sbjct: 204 SGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVT 263
Query: 290 YKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASM 349
Y LI+GF GN++ A +F M G EPD Y + G + A ++ +
Sbjct: 264 YNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEML 323
Query: 350 AKGWVP 355
+G+ P
Sbjct: 324 QRGFAP 329
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%)
Query: 174 KVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKY 233
+ +G+ P+ Y VI FC +G S + EM P+ + LL G KE +
Sbjct: 8 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 67
Query: 234 EDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHL 293
D +L M + G+ + + I C + ++A L D ML++ ++P++ TY L
Sbjct: 68 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 127
Query: 294 IHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
I G ++G+L+ A L+ M + P+ + + C+ G+ E A + KG
Sbjct: 128 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGI 187
Query: 354 VPHFSTMKSLVTGLASISKVAEANELI 380
+P+ T S++ G V++ + +
Sbjct: 188 LPNIMTYNSIIKGYCRSGNVSKGQKFL 214
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%)
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
+ P+ TYN +I C GD + +M + I PN + +L+ ++ + ED
Sbjct: 117 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
L M GI + YN I+ C+ + + L M+ + P+L TY LIHG+
Sbjct: 177 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
KE + A KL M +PD + M G + A + AKG P
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 296
Query: 358 STMKSLVTGLASISKVAEANELIGLMKKR 386
T S++ G + EA +L M +R
Sbjct: 297 YTYMSMINGHVTAGNSKEAFQLHDEMLQR 325
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
L EMR + P+ + +++ GF + D +V M CG V YN + LCK
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+R +A+ LL+ M RG+ P+L T+ LIHG+ EG L+ A +LF +M N PD
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEA 376
+ +C+ G+ + A + ++ P+ T L+ +V +A
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 175
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G P+ TYN ++ C+ +L EMR + + P+ F L+ G+ E K +
Sbjct: 46 GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKA 105
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++ M + + YN I +C+ ++A L D M SR I PN TY LI
Sbjct: 106 LQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS 165
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
++G +E A M N G P+ + C+ G K + M P
Sbjct: 166 HCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPD 225
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKK 385
T +L+ G K+ +A +L+ +M+K
Sbjct: 226 LITYNTLIHGYIKEDKMHDAFKLLNMMEK 254
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
L+ M G+ +Y + I C+ +A + D M+ G P++ TY L++G K
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 300 EGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFST 359
E L A+ L M G PD F + C G+ + AL++ + + P T
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 360 MKSLVTGLASISKVAEANELIGLMKKR--FP 388
+L+ G+ + +AN+L M R FP
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFP 154
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 152/367 (41%), Gaps = 51/367 (13%)
Query: 64 GASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEEL---KTRPDLRQNERFHVHSIVL 120
G +++P + + F++ + + + + Q+ ++ K +PD+ + + ++
Sbjct: 162 GVNISP----NVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDV------YTYCTLM 211
Query: 121 YG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGI 178
G +A+ ID A+ +EM G S N L+ G + V ++ + G
Sbjct: 212 DGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNM-FLKGC 270
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
PN TYN +I C G S+L M PN +G ++ G K+ + D +
Sbjct: 271 APNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGAR 330
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
VL +ME+ G VY+ I L K +S+EA L M + + N Y +I G
Sbjct: 331 VLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLC 390
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSY----------------------------------- 323
++G + A ++ + MTN C+P++Y
Sbjct: 391 RDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEV 450
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
C+ + + LC+ G+ + A+ V + KG P S++ GL++ V +A +L M
Sbjct: 451 CYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEM 510
Query: 384 KKRFPKS 390
+ P S
Sbjct: 511 LCQEPDS 517
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 128/306 (41%), Gaps = 4/306 (1%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEE 136
F + + F ++ ++L+ ++ + E+ V YG+A++ + A+ F+
Sbjct: 62 TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVV-EKCFVVIFKAYGKAHLPEKAVGLFDR 120
Query: 137 MD-KYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG--IEPNSETYNKVIKSFC 193
M ++ +++V + N++L I + + G I PN T+N VIK+ C
Sbjct: 121 MAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMC 180
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+ G + +M +P+ + L+ G K + ++ +L M+ G
Sbjct: 181 KVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV 240
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
+N+ I LCK L+D M +G PN TY LIHG +G LE A L M
Sbjct: 241 TFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM 300
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
+ C P+ + L + G +V +G+ + +L++GL K
Sbjct: 301 VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKS 360
Query: 374 AEANEL 379
EA +L
Sbjct: 361 QEAMQL 366
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 12/255 (4%)
Query: 115 VHSIVLYG--------QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVK 166
V ++V YG Q +D A + M++ G + +AL+ G +E
Sbjct: 306 VPNVVTYGTIINGLVKQGRALDGA-RVLALMEERGYHVNEYVYSALISGLFKEGKSQEAM 364
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
++F E V E N+ Y+ VI C G +L+EM +PNA + L+ G
Sbjct: 365 QLFKEM-TVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKG 423
Query: 227 FYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPN 286
F++ ++ + M K Y++ I LCK + +EA + ML +G KP+
Sbjct: 424 FFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPD 483
Query: 287 LDTYKHLIHGFGKEGNLEGAKKLFASM--TNGGCEPDSYCFFMFTYFLCQGGEYETALKV 344
+ Y +I+G G +E A +L+ M +PD + + LC+ A+ +
Sbjct: 484 VVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDL 543
Query: 345 CRASMAKGWVPHFST 359
+ + +G P T
Sbjct: 544 LNSMLDRGCDPDLVT 558
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 114/294 (38%), Gaps = 74/294 (25%)
Query: 167 RIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAG 226
+IF PK+ + T+ +I ++ GD S+ +L MR + F ++
Sbjct: 45 KIFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKA 104
Query: 227 FYKEHKYED-VG-------------------KVLQMMEKCGI-------------ASGVN 253
+ K H E VG VL ++ + G+ A GVN
Sbjct: 105 YGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVN 164
Query: 254 V------YNIRIQSLCKL-----------------------------------KRSEEAK 272
+ +N+ I+++CK+ R +EA
Sbjct: 165 ISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAV 224
Query: 273 ALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFL 332
+LLD M G P+ T+ LI+G K+G+L KL +M GC P+ + + L
Sbjct: 225 SLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGL 284
Query: 333 CQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
C G+ E A+ + ++ VP+ T +++ GL + + ++ LM++R
Sbjct: 285 CLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEER 338
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 16/328 (4%)
Query: 60 DICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK-TRPDLRQNERFHVHSI 118
DI ASL ++AV L + H A +L E + PD +ER ++I
Sbjct: 141 DIPAAASL----------LNMAVDALCKEGHPRAAVELFERWRREEPDSPPDER--AYNI 188
Query: 119 VLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
+L+G +A +D + + EM G+R +V L+ G + + ++ + E +
Sbjct: 189 LLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEM-REE 247
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GIE N T N ++ + ++G + +L + + PN + F L+ G+ K
Sbjct: 248 GIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGA 307
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
VL++M + GI+ YN + K E M+ G P+ TY L+
Sbjct: 308 SSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKM 367
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ LE ++ M G EPD M + LC+ ++E A +G VP
Sbjct: 368 LSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQ 427
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
+ T + L+ L + V +L LM+
Sbjct: 428 YITYQKLMRELKRLGLVRLIQKLTNLMR 455
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSI--RPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
N + + C+ G + + RR+ P+ + +LL G+ + + + VGK+ M
Sbjct: 150 NMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEM 209
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G+ V Y I+ LC +R ++A ALLD M GI+ NL T
Sbjct: 210 RLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLT-------------- 255
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
C P Y L Q G ++ A KV G P+ ST SL
Sbjct: 256 --------------CNP-------IVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSL 294
Query: 364 VTGLASISKVAEANELIGLMKKR 386
V G +A A+ ++ +M +R
Sbjct: 295 VMGYCKHGDLAGASSVLKVMTER 317
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 140/332 (42%), Gaps = 44/332 (13%)
Query: 74 DRMAFSIAVSKLSQANH-FNAISQL--LEELKTRPDLRQNERFHVHSIVLYG--QANMID 128
D + S ++ Q N F+AI + +EE+ RPD+ +++ ++ G + +++
Sbjct: 79 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV------VIYNTIIDGSCKIGLVN 132
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
A++ F+ M++ G+R N+L+ G S + + R+ + + I PN T+ V
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV-MRDIVPNVITFTAV 191
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
I F + G S + EM R+ + P+ + L+ G + ++ ++L +M G
Sbjct: 192 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 251
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGI------------------------- 283
V YN I CK KR +E L M RG+
Sbjct: 252 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 311
Query: 284 -------KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGG 336
+PN+ TY L++G +E A LF +M E D + + + +C+ G
Sbjct: 312 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 371
Query: 337 EYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
E A + R+ KG P + ++++G
Sbjct: 372 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFC 403
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
+ Q N + A+ +M++ G R V N ++ G + +F + G+
Sbjct: 90 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMER-DGVRA 148
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
++ TYN ++ C SG S ++ +M + I PN F ++ F KE K+ + K+
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 208
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ M + + V YN I LC R +EAK +LD M+++G P++ TY LI+GF K
Sbjct: 209 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKS 268
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
++ KLF M G D+ + Q G + A ++ ++ P+ T
Sbjct: 269 KRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTY 325
Query: 361 KSLVTGLASISKVAEANELIGLMKK 385
L+ GL +V +A L M+K
Sbjct: 326 SILLYGLCMNWRVEKALVLFENMQK 350
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G EP+ T + +I FC+ ++++M RP+ + ++ G K D
Sbjct: 74 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVND 133
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
++ ME+ G+ + YN + LC R +A L+ M+ R I PN+ T+ +I
Sbjct: 134 AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 193
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
F KEG A KL+ MT +PD + + LC G + A ++ + KG +P
Sbjct: 194 VFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 253
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
T +L+ G +V E +L M +R
Sbjct: 254 DVVTYNTLINGFCKSKRVDEGTKLFREMAQR 284
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 129/282 (45%), Gaps = 5/282 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + ++ V+ L + ++ ++L+ ++ R D+ N I ++ + AM+
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKL 207
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+EEM + + V N+L+ G + +E K++ + G P+ TYN +I FC
Sbjct: 208 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML-DLMVTKGCLPDVVTYNTLINGFC 266
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
+S + EM ++ + + + ++ G+++ + + ++ M+ +
Sbjct: 267 KSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIR 323
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y+I + LC R E+A L + M I+ ++ TY +IHG K GN+E A LF S+
Sbjct: 324 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL 383
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+ G +PD + C+ +++ + + R G +P
Sbjct: 384 SCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 130/316 (41%), Gaps = 16/316 (5%)
Query: 78 FSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVL--YGQANMIDHAMQTFE 135
FS +SK++++ +++ + L ++ + ++IV+ + + A+
Sbjct: 13 FSKVLSKIAKSKNYDLVISLFHHMEV---CGIGHDLYSYNIVINCLCRCSRFVIALSVVG 69
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-----YGIEPNSETYNKVIK 190
+M K+G V +++L+ G + + R+F V G P+ YN +I
Sbjct: 70 KMMKFGYEPDVVTVSSLING------FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 123
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
C+ G + + M R +R +A + L+AG ++ D ++++ M I
Sbjct: 124 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
V + I K + EA L + M R + P++ TY LI+G G ++ AK++
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 243
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M GC PD + C+ + K+ R +G V T +++ G
Sbjct: 244 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 303
Query: 371 SKVAEANELIGLMKKR 386
+ A E+ M R
Sbjct: 304 GRPDAAQEIFSRMDSR 319
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%)
Query: 215 PNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKAL 274
P+ DF +L+ K Y+ V + ME CGI + YNI I LC+ R A ++
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 275 LDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQ 334
+ M+ G +P++ T LI+GF + + A L + M G PD + C+
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127
Query: 335 GGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
G A+++ G T SLV GL + ++A L+ M R
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 4/316 (1%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D M + + LS+ ++L +K R R E F + +V Y +A + A++
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAF-LRVMVSYSRAGQLRDALKV 267
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
M + G+ ++ N + + + E+ R F E +V GI PN TYN +I+ +C
Sbjct: 268 LTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR-FLERMQVVGIVPNVVTYNCMIRGYC 326
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEK-CGIASGV 252
+ +L +M K P+ + ++ KE + +V +++ M K G+
Sbjct: 327 DLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQ 386
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
YN I L K ++EA L +G + + Y ++H KEG + AK L
Sbjct: 387 VTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINE 446
Query: 313 M-TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M + G C PD + C+ GE + A K+ + G+ P+ + +L+ GL
Sbjct: 447 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTG 506
Query: 372 KVAEANELIGLMKKRF 387
K EA E++ + ++++
Sbjct: 507 KSLEAREMMNMSEEQW 522
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 176 YGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYED 235
+G +PN+ +Y ++ C +G S ++ + PN+ + +L+ G KE K +
Sbjct: 486 HGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSE 545
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
V++ M G G N+ +QSLC+ R+ EA+ ++ L++G N+ + +IH
Sbjct: 546 ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 605
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GF + L+ A + M D + + L + G A ++ + + KG P
Sbjct: 606 GFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDP 665
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKK 385
T ++++ + KV ++L+ +++K
Sbjct: 666 TPVTYRTVIHRYCQMEKV---DDLVAILEK 692
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 124/319 (38%), Gaps = 3/319 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D++++ + L + + L++++ L +++ + I + + + D A+
Sbjct: 349 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWF 408
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
++ ++ G R +A++ E K + E P+ TY V+ FC
Sbjct: 409 LKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 468
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
G+ +L M +PN + LL G + K + +++ M E+ +
Sbjct: 469 RLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSI 528
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
Y++ + L K + EA ++ M+ +G P L+ ++G A+K
Sbjct: 529 TYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 588
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
N GC + F + CQ E + AL V T +LV L ++
Sbjct: 589 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRI 648
Query: 374 AEANELIGLMKKRFPKSGD 392
AEA E LMKK K D
Sbjct: 649 AEATE---LMKKMLHKGID 664
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 184 TYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
TY ++ + + G + ++ +M K I P + ++ + + K +D+ +L+ M
Sbjct: 634 TYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKM 693
Query: 244 ---EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+KC +YN I+ LC L + EEA LL +L + + T L+ G+ K
Sbjct: 694 ILRQKCK-----TIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKI 748
Query: 301 GNLEGAKKLFASMTNGGCEPD 321
G A K+ M N PD
Sbjct: 749 GVPLLAYKVACRMFNRNLIPD 769
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 8/221 (3%)
Query: 116 HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEF 172
+S++++G + + A EM G +N LL C + +E R F E
Sbjct: 530 YSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE--ARKFMEE 587
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
G N + VI FC++ + + S+L +M + + + L+ K+ +
Sbjct: 588 CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGR 647
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+ ++++ M GI Y I C++++ ++ A+L+ M+ R + Y
Sbjct: 648 IAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTI--YNQ 705
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDS-YCFFMFTYFL 332
+I G LE A KL + D+ C+ + +L
Sbjct: 706 VIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYL 746
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 11/305 (3%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLE---ELKTRPDLRQNERFHVHSIVLYGQANMIDH 129
LD ++ V L + F +S+ E+ T P++ + I + +
Sbjct: 206 LDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVN----YTAWIDGLCKRRYVKQ 261
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A EEM GL+ +V L+ G E R+F + K +PN TY +I
Sbjct: 262 AFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMI 321
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C G + +L M + ++PN + L+ G K ++ +++ M++ G
Sbjct: 322 GGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 381
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I CK + +EA +L S+G+K + TY LI K+G++ A L
Sbjct: 382 PNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDL 441
Query: 310 FASMTNGGCEPD--SYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
F M GC PD +Y + TY CQ + E + K + G +P T S++ G
Sbjct: 442 FDRMVENGCCPDIEAYTSLISTY--CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGY 499
Query: 368 ASISK 372
+ +
Sbjct: 500 CKVGR 504
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/332 (20%), Positives = 137/332 (41%), Gaps = 57/332 (17%)
Query: 105 PDLRQNERFHVHS--------------------IVLYGQANMIDHAMQTFEEMDKYGLRQ 144
PDLR+ R +V + + +G+A + A EM +GL
Sbjct: 77 PDLRRLMRLYVTAATAFVARGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPL 136
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
V+ N +L + + ++ +++F + G+ P+ ++ ++ C G V ++
Sbjct: 137 CVETANWVLRVGLETGSFVYARKVFDGMTRA-GVCPDERSFRALVVVCCREGKVEEVDAL 195
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
LA M R + +++ ++ +++DV + + M + G V Y I LCK
Sbjct: 196 LAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCK 255
Query: 265 LKRSEEAKALLDGMLSRGI------------------------------------KPNLD 288
+ ++A +L+ M+ RG+ KPN+
Sbjct: 256 RRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVH 315
Query: 289 TYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRAS 348
TY +I G+ +EG L A+ L M G +P++ + C+GG ++ A ++
Sbjct: 316 TYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKM 375
Query: 349 MAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
+G++P+ T +++ G K+ EA +++
Sbjct: 376 KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVL 407
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEM-RRKSIRPNATDFGLLLAGFYKEHKYED 235
G++PN T+ +I C+ G + + + ++ + S +PN + +++ G+ +E K
Sbjct: 273 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 332
Query: 236 VGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIH 295
+L M + G+ N Y I CK + A L++ M G PN+ TY +I
Sbjct: 333 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 392
Query: 296 GFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
GF K+G ++ A K+ T+ G + D + + C+ G AL + + G P
Sbjct: 393 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 452
Query: 356 HFSTMKSLVTGLASISKVAEANE------LIGLMKKR 386
SL++ ++ E+ + +IGL+ +
Sbjct: 453 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTK 489
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 89/211 (42%), Gaps = 3/211 (1%)
Query: 114 HVHSIVL--YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTE 171
H +++++ Y + + A M + GL+ + + L+ G +++ + +
Sbjct: 315 HTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNK 374
Query: 172 FPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEH 231
K G PN TYN VI FC+ G Y +L + ++ + + +L+ K+
Sbjct: 375 M-KQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQG 433
Query: 232 KYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYK 291
+ M + G + Y I + C+ ++ EE++ D L G+ P TY
Sbjct: 434 HITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYT 493
Query: 292 HLIHGFGKEGNLEGAKKLFASMTNGGCEPDS 322
+I G+ K G A ++F M GC DS
Sbjct: 494 SMIAGYCKVGRSTMALRVFERMVQNGCFADS 524
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%)
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A+ + DGM G+ P+ +++ L+ +EG +E L A+M G D+ +
Sbjct: 157 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 216
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
LC+ G ++ + R + G P+ + + GL V +A ++ M R
Sbjct: 217 SLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 272
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 2/307 (0%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQ 132
LD++++ ++ L + A QLL+ + + ++ N + I +A +++ A
Sbjct: 164 LDQVSYGTLINGLCKVGRITAALQLLKRVDGKL-VQPNAVMYNMIIDNMCKAKLVNDAFD 222
Query: 133 TFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSF 192
+ +M + V NAL+ G +F + K I PN T+N ++ F
Sbjct: 223 LYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKK-ENINPNVYTFNILVDGF 281
Query: 193 CESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGV 252
C+ G + +LA M + I+P+ + L+ G+ +K + M G+ + V
Sbjct: 282 CKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANV 341
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
+Y + CK+K +EA L + M R I PN+ TY LI G K G + A KL
Sbjct: 342 QIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDE 401
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + G P+ + LC+ + A+ + +G P T L+ GL +
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGR 461
Query: 373 VAEANEL 379
+ +A +
Sbjct: 462 LEDAQNV 468
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 167/384 (43%), Gaps = 25/384 (6%)
Query: 20 NLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPESPLDRMAFS 79
N SSL+ A + AL++ ++ + ++S+ F IL I C + L L+ ++FS
Sbjct: 65 NKILSSLVKAKHHSTALSLHQQME--LNGIESDFFTFNIL-INCFSQLG----LNSLSFS 117
Query: 80 IAVSKLSQANHFNAIS--QLLEELKTRPDLRQNERFHVHSI--------VLYG------- 122
I L + H AI+ L++ L + + Q FH + V YG
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 123 QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNS 182
+ I A+Q + +D ++ + N ++ +K + ++++ I P+
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV-AKRICPDV 236
Query: 183 ETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQM 242
TYN +I F + + +M++++I PN F +L+ GF KE K D VL +
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296
Query: 243 MEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN 302
M K I V YN + C + + +AK + D M S G+ N+ Y +++GF K
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356
Query: 303 LEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKS 362
++ A LF M P+ + LC+ G ALK+ +G P+ T S
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416
Query: 363 LVTGLASISKVAEANELIGLMKKR 386
++ L V +A L+ +K +
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQ 440
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 106/234 (45%), Gaps = 1/234 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y N ++ A F+ M G+ +V ++ G K +E +F E + I P
Sbjct: 316 YCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEM-RCRKIIP 374
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N TY+ +I C+ G ++ EM + PN + +L K H + +L
Sbjct: 375 NVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALL 434
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
++ GI + Y I I+ LC+ R E+A+ + + +L +G ++ Y +I GF +
Sbjct: 435 TNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G + A L + M + GC P++ + + L + E +TA K+ R + +G +
Sbjct: 495 GFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 156/373 (41%), Gaps = 24/373 (6%)
Query: 11 FNLKTVNYRNLATSSLLSAGDEAAALTIKEKKRATIARLKSESNPFRILDICCGASLAPE 70
F+L V+Y L + L G AAL + ++ + + + I+D C A L +
Sbjct: 162 FHLDQVSYGTL-INGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM-IIDNMCKAKLVND 219
Query: 71 S-------------PLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHS 117
+ P D ++ +S S + N L ++K N + +
Sbjct: 220 AFDLYSQMVAKRICP-DVFTYNALISGFSAVSKLNYAIDLFNKMKKE---NINPNVYTFN 275
Query: 118 IVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLG-CILSKNYEEVKRIFTEFPK 174
I++ G + ++ A M K ++ V N+L+ G C ++K + K IF
Sbjct: 276 ILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK-VNKAKDIFDSMAS 334
Query: 175 VYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYE 234
G+ N + Y ++ FC+ ++ EMR + I PN + L+ G K +
Sbjct: 335 -GGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIF 393
Query: 235 DVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLI 294
K++ M G + Y+ + +LCK ++A ALL + +GI+P++ TY LI
Sbjct: 394 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILI 453
Query: 295 HGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWV 354
G + G LE A+ +F + G D Y + + C G ++ AL + G +
Sbjct: 454 KGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCI 513
Query: 355 PHFSTMKSLVTGL 367
P+ T + ++ L
Sbjct: 514 PNAKTYELVILSL 526
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 255 YNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMT 314
+N + SL K K A +L M GI+ + T+ LI+ F + G + +FA +
Sbjct: 64 FNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKIL 123
Query: 315 NGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVA 374
G P + F LC G AL +A+G+ + +L+ GL + ++
Sbjct: 124 KKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRIT 183
Query: 375 EANELI 380
A +L+
Sbjct: 184 AALQLL 189
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 1/236 (0%)
Query: 150 NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMR 209
N+++ G + RIF E + + PN TYN +I C G+ +IL M
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSML-NLLPNCVTYNALIDGHCHDGNFEQALTILEMME 335
Query: 210 RKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSE 269
+PN + LL G + K+E +L+ M G+ G Y I LC+
Sbjct: 336 ATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLN 395
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
E+ LLD ML G+ P++ T+ LI+GF + G ++ K++ M G P+S +
Sbjct: 396 ESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLI 455
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
Y C+ G+ A KV A G+ + LV+ L KV A M K
Sbjct: 456 YNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSK 511
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 1/284 (0%)
Query: 101 LKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK 160
+ T P + N I +Y + M+ A++TF M G SV N LL + +
Sbjct: 88 MNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKER 147
Query: 161 NYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
V F E + P+ T+N +I C G +L +M P+ +
Sbjct: 148 KVGAVWLFFKEML-ARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTY 206
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
+L + K+ +Y+ +++ M GI + YN+ + LCK RS + LL M
Sbjct: 207 NTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRK 266
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
R I PN TY +I+GF KEG + A ++F M+ P+ + C G +E
Sbjct: 267 RMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQ 326
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
AL + A G P+ + +L+ GL +K + ++ M+
Sbjct: 327 ALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMR 370
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 149 LNALLLGCI--------LSKN--YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDS 198
+N +++GCI L +N E ++ + K G+ P+ T++ +I FC G
Sbjct: 371 MNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLK-DGVVPDVVTFSVLINGFCRVGKI 429
Query: 199 SSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIR 258
+V I+ +M + + PN+ + L+ + K + KV M + G + + N+
Sbjct: 430 KNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVL 489
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
+ SLCK + A+ M G PN T+ +I+G+G GN A +F M G
Sbjct: 490 VSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGH 549
Query: 319 EPDSYCFFMFTYFLCQGGEYETA 341
P + + LC+ G+++ A
Sbjct: 550 HPSHFTYGGLLKALCRAGKFKEA 572
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 125/311 (40%), Gaps = 3/311 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D + FS+ ++ + + +++ ++ + L N + I Y + + A +
Sbjct: 412 DVVTFSVLINGFCRVGKIKNVKEIICKM-YKAGLAPNSIIYTTLIYNYCKTGDVVEAFKV 470
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
+ M + G + N L+ + F K+ G PNS T++ +I +
Sbjct: 471 YVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKI-GNVPNSITFDCIINGYG 529
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
SG+ +S+ EM + P+ +G LL + K+++ ++L + A
Sbjct: 530 NSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTV 589
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YN + K +A AL D M+ R + P+ TY + G + G + A + ++
Sbjct: 590 TYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNL 649
Query: 314 TN-GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
G P+ + F L + G+ + AL C G ++ G + + K
Sbjct: 650 LGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGK 709
Query: 373 VAEANELIGLM 383
+A+A ++ +M
Sbjct: 710 MAKAGDIFTMM 720
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 2/258 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ E+M+K GL + A N +L G + IFT I P+ TYN ++
Sbjct: 678 ALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILL 737
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC-GI 248
+ + + S ++ M R I P+ L+ GF K DVG L G+
Sbjct: 738 HGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAML-DVGLKLLKKMLLDGV 796
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
A +N+ I C+ +A L++ M I P++ T+ +I + ++ +
Sbjct: 797 AVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHL 856
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L M GC PD + +C+ G A K+ A G +LV GLA
Sbjct: 857 LLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLA 916
Query: 369 SISKVAEANELIGLMKKR 386
KV EA ++ M ++
Sbjct: 917 KCGKVEEAKLVLDFMLRK 934
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 2/207 (0%)
Query: 163 EEVKRIF--TEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDF 220
+EV + F ++ I P+ T++ +I + +L EM + P+ +
Sbjct: 814 DEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQY 873
Query: 221 GLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLS 280
L+ + K+ ME GI+SG + ++ L K + EEAK +LD ML
Sbjct: 874 IALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLR 933
Query: 281 RGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYET 340
+ + P + T+ L+H F + +L A KL +M + D + + LC G+ +
Sbjct: 934 KSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVAS 993
Query: 341 ALKVCRASMAKGWVPHFSTMKSLVTGL 367
ALK+ + +G P+ +T L+ +
Sbjct: 994 ALKLYKEIKQRGLWPNMTTYCILIDAI 1020
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 1/253 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
+ A+ E M+ G + + + +ALL G +E K I E ++ G+ Y
Sbjct: 325 EQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSIL-ERMRMNGMIVGCIAYTA 383
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+I C +G + +L +M + + P+ F +L+ GF + K ++V +++ M K G
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+A +Y I + CK EA + M G N L+ K+G + A+
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAE 503
Query: 308 KLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGL 367
F M+ G P+S F G A + + G P T L+ L
Sbjct: 504 YFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563
Query: 368 ASISKVAEANELI 380
K EA L+
Sbjct: 564 CRAGKFKEAKRLL 576
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%)
Query: 214 RPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKA 273
+ N + F LL+ + +E D + ++M G V N+ + L K ++
Sbjct: 95 KSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWL 154
Query: 274 LLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLC 333
ML+R + P++ T+ LI+ EG L+ A L M G P + + C
Sbjct: 155 FFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214
Query: 334 QGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ G Y+ AL++ +KG T LV L ++ A+ L+ M+KR
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKR 267
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRK-SIRPNATDFGLLLAGFYKEHKYEDVGK 238
P+ YN +I +C++GD + ++++ S +PNA F L+ K + D
Sbjct: 9 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V Q M G+ + VNV N I C+L +A+ LL M + ++ TY +L+ G
Sbjct: 69 VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128
Query: 299 KEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFS 358
K G A ++F++M GC PD+ + + L + G+ + AL++ KG +P
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188
Query: 359 TMKSLVTGLASISKVAEANELIGLMKKR 386
T ++ L+S + +A G+MK+R
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRR 216
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 1/258 (0%)
Query: 122 GQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPN 181
G+A A++ F M K G N +L+ C+ + + E GI P+
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPDTVVYN-VLISCLGKQGKVDEALELLEDMNRKGIMPD 186
Query: 182 SETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQ 241
TYN VI G YS M+R+ P+ + LL G K + ++ +
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 246
Query: 242 MMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEG 301
M+ + + I +L K R E+A ++ G PN Y LI GF + G
Sbjct: 247 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSG 306
Query: 302 NLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMK 361
++ +LF M C PDS + + + G A+++ + + +G P +T
Sbjct: 307 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYN 366
Query: 362 SLVTGLASISKVAEANEL 379
L+ L+ +V +A L
Sbjct: 367 VLIRSLSMAGQVEDAYTL 384
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 133/319 (41%), Gaps = 3/319 (0%)
Query: 74 DRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQT 133
D +A++ ++ +A + + LK + N ++ + + A+
Sbjct: 10 DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAV 69
Query: 134 FEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFC 193
F+EM GL+ V+ N L+ + +R+ + + TY+ ++ +
Sbjct: 70 FQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHM-TAHAFVLDVFTYSYLMDALG 128
Query: 194 ESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN 253
++G ++ + + M++ P+ + +L++ K+ K ++ ++L+ M + GI
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188
Query: 254 VYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASM 313
YNI I L R E+A + M R P++ TY L++G K + A LF M
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248
Query: 314 TNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKV 373
C PD F L + G E AL+ + G VP+ +L++G +V
Sbjct: 249 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQV 308
Query: 374 AEANELIGLMKK--RFPKS 390
+ EL M + FP S
Sbjct: 309 DKGYELFQDMIECSCFPDS 327
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 1/218 (0%)
Query: 168 IFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGF 227
+F+ K G P++ YN +I + G +L +M RK I P+ + +++
Sbjct: 139 VFSNMQKA-GCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVL 197
Query: 228 YKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNL 287
+YE MM++ + V YN + L KL+R++EA L D M + P+L
Sbjct: 198 SSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDL 257
Query: 288 DTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRA 347
T+ LI K G +E A + A + G P+SY + C+ G+ + ++ +
Sbjct: 258 TTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQD 317
Query: 348 SMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
+ P T LV G + + A EL+ M +
Sbjct: 318 MIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 355
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 1/246 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYG 177
I G+ +D A++ E+M++ G+ N ++ YE+ F K
Sbjct: 159 ISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMM-KRRK 217
Query: 178 IEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVG 237
P+ TYN ++ + + + EM+ P+ T FG L+ K + ED
Sbjct: 218 HSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL 277
Query: 238 KVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGF 297
+ + K G +YN I C+ + ++ L M+ P+ TY L+ GF
Sbjct: 278 EQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGF 337
Query: 298 GKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHF 357
+ G+ A +L M G P + + L G+ E A + + +AKG+ P
Sbjct: 338 SRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDM 397
Query: 358 STMKSL 363
T +L
Sbjct: 398 QTYSAL 403
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 138/317 (43%), Gaps = 4/317 (1%)
Query: 69 PESPLDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMID 128
P+ P+ + F+ +S + + + + L +E++ R ++ N I + + +D
Sbjct: 36 PQPPI--IEFNRLLSSVVRMKKYETVVSLFKEMEFR-GIKYNVCTLSILINCFCFLHHVD 92
Query: 129 HAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKV 188
+ F + K G + V L+ G E + E V G P+ T N +
Sbjct: 93 YGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV-GCVPDVVTCNSL 151
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
++ +C G V I M K ++P+ + + + G+ K K ++ ++ M G+
Sbjct: 152 MRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGV 211
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
YN I++LC+ R +A+ L M + G+ P++ Y L+ GF K+GNL+
Sbjct: 212 VPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLV 271
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
LF M +PD + + +C+ + + A +V + +G P T +LV GL
Sbjct: 272 LFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLC 331
Query: 369 SISKVAEANELIGLMKK 385
+ EA L M++
Sbjct: 332 REGSIIEALRLFRKMEE 348
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ID + F M GL+ V + + + G + +E +F E G+ P
Sbjct: 155 YCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSH-RGVVP 213
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
N+ TYN +IK+ C++ + +M + P+ + LL GF K+ +++ +
Sbjct: 214 NAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLF 273
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
Q M++ + + VY I I +C+ ++ ++AK +L ++ G+KP++ TY L+ G +E
Sbjct: 274 QEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCRE 333
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGW 353
G++ A +LF M GC P S + + Q + T +++ +G+
Sbjct: 334 GSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGF 386
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A +EM G V N+L+ G ++V++IF G++P+ +Y+ I
Sbjct: 129 AAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIF-HLMVSKGLKPDVYSYSIFI 187
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
+C+ + EM + + PNA + L+ + + D + + M CG++
Sbjct: 188 NGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLS 247
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ Y+ + CK +E L M R +KP+L Y +I+G + ++ AK++
Sbjct: 248 PDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEV 307
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
+ + G +PD + + LC+ G AL++ R G +P + L+ G
Sbjct: 308 LSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQ 367
Query: 370 ISKVAEANELIGLMKKR 386
+ + +LI M R
Sbjct: 368 HNDTSTVVQLIHEMADR 384
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 1/263 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D A+ +F M + + N LL + K YE V +F E + GI+ N T +
Sbjct: 21 LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEM-EFRGIKYNVCTLS 79
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I FC +S+ + ++ +P+ F L+ G + K E +L+ M
Sbjct: 80 ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV 139
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G V N ++ C + ++ + + M+S+G+KP++ +Y I+G+ K ++ A
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTG 366
+LF M++ G P++ + LCQ A + R A G P +L+ G
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259
Query: 367 LASISKVAEANELIGLMKKRFPK 389
+ E L M++R K
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVK 282
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 1/202 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y + ID AM+ F+EM G+ + N L+ + + + +F + G+ P
Sbjct: 190 YCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCAC-GLSP 248
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ Y+ ++ FC+ G+ + + EM+R+ ++P+ + +++ G + K +D +VL
Sbjct: 249 DILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVL 308
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ G+ V+ Y + LC+ EA L M G P +Y L+ G +
Sbjct: 309 SRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQH 368
Query: 301 GNLEGAKKLFASMTNGGCEPDS 322
+ +L M + G D+
Sbjct: 369 NDTSTVVQLIHEMADRGFYADA 390
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 137/328 (41%), Gaps = 16/328 (4%)
Query: 60 DICCGASLAPESPLDRMAFSIAVSKLSQANHFNAISQLLEELK-TRPDLRQNERFHVHSI 118
DI ASL ++AV L + H A +L E + PD +ER ++I
Sbjct: 141 DIPAAASL----------LNMAVDALCKEGHPRAAVELFERWRREEPDSPPDER--AYNI 188
Query: 119 VLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVY 176
+L+G +A +D + + EM G+R +V L+ G + + ++ + E +
Sbjct: 189 LLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEM-REE 247
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
GIE N T N ++ + ++G + +L + + PN + F L+ G+ K
Sbjct: 248 GIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGA 307
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
VL++M + GI+ YN + K E M+ G P+ TY L+
Sbjct: 308 SSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKM 367
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
+ LE ++ M G EPD M + LC+ ++E A +G VP
Sbjct: 368 LSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQ 427
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMK 384
+ T + L+ L + V +L LM+
Sbjct: 428 YITYQKLMRELKRLGLVHLIQKLTNLMR 455
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 186 NKVIKSFCESGDSSSVYSILAEMRRKSI--RPNATDFGLLLAGFYKEHKYEDVGKVLQMM 243
N + + C+ G + + RR+ P+ + +LL G+ + + + VGK+ M
Sbjct: 150 NMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEM 209
Query: 244 EKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNL 303
G+ V Y I+ LC +R ++A ALLD M GI+ NL T
Sbjct: 210 RLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLT-------------- 255
Query: 304 EGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSL 363
C P Y L Q G ++ A KV G P+ ST SL
Sbjct: 256 --------------CNP-------IVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSL 294
Query: 364 VTGLASISKVAEANELIGLMKKR 386
V G +A A+ ++ +M +R
Sbjct: 295 VMGYCKHGDLAGASSVLKVMTER 317
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F+ + K+GLR SV + N L+ G I + ++ ++ G++P+ TY+ +I
Sbjct: 155 AQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAM-HASGVQPDVYTYSVLI 213
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL-QMMEKCGI 248
C+ + + EM K + PN F L+ G K K + + QM+ +C +
Sbjct: 214 NGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFL 273
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
+ YN I LCK ++A+ LLD M +G+KP+ TY LI G KEG+L+ A +
Sbjct: 274 PDLIT-YNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFE 332
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
L +M D + LCQ G A K+ R ++ G P T ++
Sbjct: 333 LRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFC 392
Query: 369 SISKVAEANELIGLMKKR 386
V A +L+ M+++
Sbjct: 393 KKEDVKTAAKLLKEMQRQ 410
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 1/278 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y ++ + A++ F ++ LR D +L + K ++ V + E + G
Sbjct: 76 YLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILEC-GYPA 134
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ +N ++ FC+ G+ S+ + + +RP+ F L+ G+ + + K+
Sbjct: 135 SLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLK 194
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M G+ V Y++ I LCK + EA L + ML +G+ PN T+ LI G K
Sbjct: 195 NAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 301 GNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTM 360
G ++ A + + M + PD + Y LC+ G+ + A + KG P T
Sbjct: 255 GKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITY 314
Query: 361 KSLVTGLASISKVAEANELIGLMKKRFPKSGDMWNAAL 398
+L+ G + A EL M K + D+ AL
Sbjct: 315 TTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTAL 352
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%)
Query: 180 PNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKV 239
P+ TYN +I C+ GD +L EMR K ++P+ + L+ G KE + ++
Sbjct: 274 PDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFEL 333
Query: 240 LQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGK 299
+ M K I Y I LC+ R+ +A+ +L MLS G+KP+ TY +I+ F K
Sbjct: 334 RETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCK 393
Query: 300 EGNLEGAKKLFASMTNGGCEP 320
+ +++ A KL M G P
Sbjct: 394 KEDVKTAAKLLKEMQRQGHVP 414
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 1/229 (0%)
Query: 127 IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYN 186
+D + M G++ V + L+ G E +F E G+ PN T+
Sbjct: 187 LDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLD-KGLVPNGVTFT 245
Query: 187 KVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKC 246
+I C++G S +M + P+ + L+ G K+ + +L M
Sbjct: 246 TLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMK 305
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGA 306
G+ Y I CK + A L + M+ I+ + Y LI G +EG A
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDA 365
Query: 307 KKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVP 355
+K+ M + G +PD+ + M C+ + +TA K+ + +G VP
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 1/256 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A F + K+GLR SV + N L+ G I + +E R+ + G++P+ TY+ +I
Sbjct: 144 AQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAM-HASGVQPDVYTYSVLI 202
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
C+ + EM K + PN F L+ G K + + ++ + M ++
Sbjct: 203 NGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLS 262
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
+ YN I LCK ++A L+D M +G+KP+ TY LI G KEG+LE A +
Sbjct: 263 PDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEH 322
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
M D + LCQ G Y A KV R ++ G P T ++
Sbjct: 323 RKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCK 382
Query: 370 ISKVAEANELIGLMKK 385
V ++L+ M++
Sbjct: 383 KGDVWTGSKLLKEMQR 398
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
+N ++ FC+ GD S+ + + +RP+ F L+ G+ + ++ ++ M
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 187
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
G+ V Y++ I LCK + ++A L D ML +G+ PN T+ LI G K G ++
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVD 247
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A +++ M + PD + Y LC+ G+ + A + KG P T +L+
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Query: 365 TG 366
G
Sbjct: 308 DG 309
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 220 FGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGML 279
F +L+ F KE V + K G+ V +N + +L +E L M
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 187
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
+ G++P++ TY LI+G KE ++ A +LF M + G P+ F C+ G +
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVD 247
Query: 340 TALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
A+++ + +++ P T +L+ GL + +A++LI M +
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMK 294
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 145/375 (38%), Gaps = 46/375 (12%)
Query: 57 RILDICCGASL--------APESPLDRMAFS---IAVSKLSQANHFNAISQLLEELKTRP 105
R+L+ C A + A + P R + + LS+ F A+ LLEE++
Sbjct: 86 RVLNRCGDAGILAYKFFVWASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDN 145
Query: 106 DLRQNERFHVHSIVLYGQANMIDHAMQTFEEMDKYGLRQS-------VDAL--------- 149
+ V + + + M++ A++ +EM KYG +DAL
Sbjct: 146 SVLITSEVFVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEA 205
Query: 150 ------------------NALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKS 191
LL G E K + + + G EP+ YN ++
Sbjct: 206 ASLFEDMRVRFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREA-GFEPDIVVYNNLLSG 264
Query: 192 FCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASG 251
+ +G + +L E+RRK PNAT + +L+ + K ++ +V ME+ G +
Sbjct: 265 YATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDAD 324
Query: 252 VNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFA 311
V Y + CK + ++ +L M+ +G PN TY HL+ K+ LE K+L
Sbjct: 325 VVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMG 384
Query: 312 SMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASIS 371
M GC PD + + C+ GE + G P T ++ G
Sbjct: 385 EMQKIGCIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHG 444
Query: 372 KVAEANELIGLMKKR 386
+ EA + M +R
Sbjct: 445 YLVEACQYFKEMVER 459
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 116/302 (38%), Gaps = 38/302 (12%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y A + A +E+ + G + + L+ + +E R+F E + G +
Sbjct: 265 YATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERS-GCDA 323
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TY ++ FC+ Y IL M +K PN + L+ K+ + E+ +++
Sbjct: 324 DVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELM 383
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
M+K G +++YN+ I+ CKL + M G+ P LDT+ +I+GF
Sbjct: 384 GEMQKIGCIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGH 443
Query: 301 G-------------------------------------NLEGAKKLFASMTNGGCEPDSY 323
G LE AK L++ + GCE +
Sbjct: 444 GYLVEACQYFKEMVERGLLSSRQYGILKDLLNALLRGEKLELAKDLWSCIVTKGCELNVD 503
Query: 324 CFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLM 383
+ ++ + L G + A C M +P T L+ GL + A E+ +
Sbjct: 504 SWTIWIHALFSNGHVKEACSYCLDMMDADLMPKPETFAKLMRGLRKLYNRQFAAEITEKV 563
Query: 384 KK 385
+K
Sbjct: 564 RK 565
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 3/310 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM-IDHAMQTFE 135
AFS +S ++ +F+ ++ E +K L+ N + I G+ + ++ FE
Sbjct: 224 AFSALISAYGKSGYFDEAIKVFESMKV-SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFE 282
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + G++ N+LL C +E + +F E GI+ + TYN ++ + C+
Sbjct: 283 EMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMID-RGIDQDVFTYNTLLDAVCKG 341
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G Y I+ EM K I PN + + G+ K + ED + M+ GI Y
Sbjct: 342 GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY 401
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + KL R E+A + M S G+K ++ TY L+ G+GK+G ++F M
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKK 461
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
P+ + +G YE A++V R G L+ L V
Sbjct: 462 DRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDS 521
Query: 376 ANELIGLMKK 385
A L+ M K
Sbjct: 522 AVLLLDEMTK 531
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEP 180
Y +A ++ A+ + EM G+ + N LL +E+ ++ E G++
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSS-GVKK 431
Query: 181 NSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVL 240
+ TYN ++ + + G + V + EM++ + PN + L+ + K YE+ +V
Sbjct: 432 DVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVF 491
Query: 241 QMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKE 300
+ ++ G+ + V +Y+ I +LCK + A LLD M GI+PN+ TY +I FG+
Sbjct: 492 REFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Query: 301 GNLE 304
E
Sbjct: 552 TTAE 555
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 36/174 (20%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN---- 302
G + V ++ I + K +EA + + M G+KPNL TY +I GK G
Sbjct: 217 GYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKR 276
Query: 303 --------------------------------LEGAKKLFASMTNGGCEPDSYCFFMFTY 330
E A+ LF M + G + D + +
Sbjct: 277 VVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLD 336
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+C+GG+ + A ++ K +P+ T ++ G A ++ +A L MK
Sbjct: 337 AVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMK 390
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I +L +L + E AK + + LS G + + LI +GK G + A K+F SM G
Sbjct: 194 ISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGL 253
Query: 319 EPDSYCFFMFTYFLCQGG-EYETALKVCRASMAKGWVPHFSTMKSLV 364
+P+ + +GG E++ +++ + G P T SL+
Sbjct: 254 KPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLL 300
>gi|357494871|ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519059|gb|AET00683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 861
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 1/270 (0%)
Query: 118 IVLYGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKV-Y 176
+ L G+ M++ F + K G S + N LL C+ + V +++ +
Sbjct: 136 VRLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGV 195
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ + ET +IK+FC + Y +L ++ K + + T F L+ GF K+ +Y+ V
Sbjct: 196 GVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRV 255
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
++L +M + Y I L K ++++EA + + + RG P+ Y +I G
Sbjct: 256 SEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKG 315
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
F G L A+KL+ M G P+ Y + + Y C+ ++ A K+ +G+ +
Sbjct: 316 FCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAEN 375
Query: 357 FSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ ++++GL K EA L M ++
Sbjct: 376 VVSYSTMISGLYLHGKTDEALSLFHEMSRK 405
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 1/236 (0%)
Query: 145 SVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSI 204
S+ ++ G + + +E R+F + K G P+ Y VIK FC+ G + +
Sbjct: 270 SIYTYQEIINGLLKRRKNDEAFRVFNDL-KDRGYFPDRVMYTTVIKGFCDMGLLAEARKL 328
Query: 205 LAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCK 264
EM +K + PN + +++ G+ K + + K+ M G A V Y+ I L
Sbjct: 329 WFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYL 388
Query: 265 LKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYC 324
+++EA +L M +GI +L +Y LI G +EG L A L + G EP
Sbjct: 389 HGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSS 448
Query: 325 FFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELI 380
F LC+ G+ E A+++ + + P ST ++ GL+ A+ E +
Sbjct: 449 FTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWL 504
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 138/313 (44%), Gaps = 6/313 (1%)
Query: 73 LDRMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYG--QANMIDHA 130
+D F+ ++ + ++ +S++L + ++ N + + ++ G + D A
Sbjct: 234 VDNTVFNALINGFCKQKQYDRVSEILHIMIA---MKCNPSIYTYQEIINGLLKRRKNDEA 290
Query: 131 MQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIK 190
+ F ++ G ++ G E ++++ E + G+ PN TYN +I
Sbjct: 291 FRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQ-KGLVPNEYTYNVMIY 349
Query: 191 SFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIAS 250
+C+ D + + +M + N + +++G Y K ++ + M + GIA
Sbjct: 350 GYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIAR 409
Query: 251 GVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLF 310
+ YN I+ LC+ +A LL+ +L +G++P++ ++ LI K G+ EGA +L
Sbjct: 410 DLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLL 469
Query: 311 ASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASI 370
M + EP + L + G++ ++ ++ P+ T + L+ L
Sbjct: 470 KDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRE 529
Query: 371 SKVAEANELIGLM 383
+++ + ++ LM
Sbjct: 530 NRLDDILIVLDLM 542
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 103/262 (39%), Gaps = 1/262 (0%)
Query: 125 NMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSET 184
N + + + ++ + GL NAL+ G K Y+ V I P+ T
Sbjct: 215 NKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEIL-HIMIAMKCNPSIYT 273
Query: 185 YNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMME 244
Y ++I + + + + +++ + P+ + ++ GF + K+ M
Sbjct: 274 YQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMI 333
Query: 245 KCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLE 304
+ G+ YN+ I CK++ EA+ L D M RG N+ +Y +I G G +
Sbjct: 334 QKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTD 393
Query: 305 GAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLV 364
A LF M+ G D + LCQ GE A + + +G P S+ L+
Sbjct: 394 EALSLFHEMSRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLI 453
Query: 365 TGLASISKVAEANELIGLMKKR 386
L + A L+ M R
Sbjct: 454 KCLCKVGDTEGAMRLLKDMHDR 475
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 3/256 (1%)
Query: 115 VHSIVLYGQANM--IDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEF 172
+++ V+ G +M + A + + EM + GL + N ++ G +++ E ++++ +
Sbjct: 308 MYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDM 367
Query: 173 PKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHK 232
G N +Y+ +I G + S+ EM RK I + + L+ G +E +
Sbjct: 368 CG-RGYAENVVSYSTMISGLYLHGKTDEALSLFHEMSRKGIARDLISYNSLIKGLCQEGE 426
Query: 233 YEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKH 292
+L + G+ V+ + I+ LCK+ +E A LL M R ++P T+ +
Sbjct: 427 LAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDY 486
Query: 293 LIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKG 352
+I G K+G+ + M + +P+ F L + + L V +G
Sbjct: 487 MIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREG 546
Query: 353 WVPHFSTMKSLVTGLA 368
+ S + SLVT +
Sbjct: 547 YRLEKSRICSLVTKFS 562
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 109/283 (38%), Gaps = 41/283 (14%)
Query: 141 GLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSS 200
G + + NAL + + + K + E+P P +++ ++ E+G
Sbjct: 92 GFKPDQSSCNALFDALVDAGAVKAAKSLL-EYPDFV---PKNDSLEGYVRLLGENGMVEE 147
Query: 201 VYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVN------- 253
V+ + +++ P+A+ F + L K + + V K+ ++M + G+ ++
Sbjct: 148 VFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKLYELMIESGVGVNIDVETVGCL 207
Query: 254 ------------------------------VYNIRIQSLCKLKRSEEAKALLDGMLSRGI 283
V+N I CK K+ + +L M++
Sbjct: 208 IKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKC 267
Query: 284 KPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALK 343
P++ TY+ +I+G K + A ++F + + G PD + C G A K
Sbjct: 268 NPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARK 327
Query: 344 VCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMKKR 386
+ + KG VP+ T ++ G + AEA +L M R
Sbjct: 328 LWFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGR 370
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 3/310 (0%)
Query: 77 AFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANM-IDHAMQTFE 135
AFS +S ++ +F+ ++ E +K L+ N + I G+ + ++ FE
Sbjct: 224 AFSALISAYGKSGYFDEAIKVFESMKV-SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFE 282
Query: 136 EMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCES 195
EM + G++ N+LL C +E + +F E GI+ + TYN ++ + C+
Sbjct: 283 EMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMID-RGIDQDVFTYNTLLDAVCKG 341
Query: 196 GDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVY 255
G Y I+ EM K I PN + + G+ K + ED + M+ GI Y
Sbjct: 342 GQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSY 401
Query: 256 NIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTN 315
N + KL R E+A + M S G+K ++ TY L+ G+GK+G ++F M
Sbjct: 402 NTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKK 461
Query: 316 GGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAE 375
P+ + +G YE A++V R G L+ L V
Sbjct: 462 DRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDS 521
Query: 376 ANELIGLMKK 385
A L+ M K
Sbjct: 522 AVLLLDEMTK 531
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 5/186 (2%)
Query: 121 YGQANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSK--NYEEVKRIFTEFPKVYGI 178
Y +A ++ A+ + EM G+ + N LL I +K +E+ ++ E G+
Sbjct: 373 YAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLL--SIYAKLGRFEDALKVCKEMGSS-GV 429
Query: 179 EPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGK 238
+ + TYN ++ + + G + V + EM++ + PN + L+ + K YE+ +
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 239 VLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFG 298
V + ++ G+ + V +Y+ I +LCK + A LLD M GI+PN+ TY +I FG
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFG 549
Query: 299 KEGNLE 304
+ E
Sbjct: 550 RSTTAE 555
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 36/174 (20%)
Query: 247 GIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGN---- 302
G + V ++ I + K +EA + + M G+KPNL TY +I GK G
Sbjct: 217 GYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKR 276
Query: 303 --------------------------------LEGAKKLFASMTNGGCEPDSYCFFMFTY 330
E A+ LF M + G + D + +
Sbjct: 277 VVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLD 336
Query: 331 FLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISKVAEANELIGLMK 384
+C+GG+ + A ++ K +P+ T ++ G A ++ +A L MK
Sbjct: 337 AVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMK 390
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 259 IQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGC 318
I +L +L + E AK + + LS G + + LI +GK G + A K+F SM G
Sbjct: 194 ISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGL 253
Query: 319 EPDSYCFFMFTYFLCQGG-EYETALKVCRASMAKGWVPHFSTMKSLV 364
+P+ + +GG E++ +++ + G P T SL+
Sbjct: 254 KPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLL 300
>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
Length = 225
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 1/187 (0%)
Query: 177 GIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDV 236
G+ + TY +I+ C++ + ++ EM I PN + LL G+ K ++EDV
Sbjct: 24 GVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDV 83
Query: 237 GKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHG 296
GKV M + GI V +Y I SLCK+ ++++A ++D M+ RG++PN+ TY LI+
Sbjct: 84 GKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINC 143
Query: 297 FGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPH 356
KEG+++ A + M+ G PD + L E + A+ + M +G++
Sbjct: 144 MCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE-EMVRGYIIQ 202
Query: 357 FSTMKSL 363
S ++
Sbjct: 203 SSQQSAI 209
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 128 DHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNK 187
D A+ M G+R V L+ G + ++ + E + GIEPN Y+
Sbjct: 11 DQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE-SGIEPNVVVYSS 69
Query: 188 VIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCG 247
+++ +C+SG V + EM K I P+ + L+ K K + V+ MM + G
Sbjct: 70 LLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRG 129
Query: 248 IASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAK 307
+ V YN+ I +CK +EA +L M +G+ P++ TY LI G ++ A
Sbjct: 130 LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 189
Query: 308 KLFASMTNG 316
L M G
Sbjct: 190 WLLEEMVRG 198
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%)
Query: 189 IKSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGI 248
+++ C + +L MR +R + +G L+ G + + +++ M + GI
Sbjct: 1 MRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGI 60
Query: 249 ASGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKK 308
V VY+ +Q CK R E+ + M +GI+P++ Y LI K G + A
Sbjct: 61 EPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHG 120
Query: 309 LFASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLA 368
+ M G EP+ + + +C+ G + A+ V + KG P T +L+ GL+
Sbjct: 121 VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLS 180
Query: 369 SISKVAEANELIGLMKKRF 387
+ ++ EA L+ M + +
Sbjct: 181 DVLEMDEAMWLLEEMVRGY 199
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 1/255 (0%)
Query: 130 AMQTFEEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVI 189
A+ F+EM G+ + + +L G +K + +R+F++ + G + TYN ++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM-RASGCNRDLITYNVLL 275
Query: 190 KSFCESGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIA 249
FC+SG +++L + + +G L+ G ++ +YE+ Q M + I
Sbjct: 276 NGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIK 335
Query: 250 SGVNVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKL 309
V +Y I I+ L + R EA LL M RG++P+ Y LI GF G L+ A+ L
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395
Query: 310 FASMTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLAS 369
++ C P+++ + + +C+ G A + + G +P T SL+ GL
Sbjct: 396 RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCK 455
Query: 370 ISKVAEANELIGLMK 384
+++ EA L M+
Sbjct: 456 ANRLEEARLLFYQME 470
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 131/276 (47%), Gaps = 18/276 (6%)
Query: 107 LRQNERFHV--HSIVLYG--QANMIDHAMQTFEEMDKYGLRQSVDALNALLLGCILSKNY 162
LR+N + V ++I++ G Q + A+ EM + GLR NAL+ G
Sbjct: 330 LRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYL 389
Query: 163 EEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRRKSIRPNATDFGL 222
+E + + E K + PN+ TY+ +I C++G + I EM + P+ F
Sbjct: 390 DEAESLRLEISK-HDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNS 448
Query: 223 LLAGFYKEHKYEDVGKVLQMMEKCG-------IASGVN-VYNI-----RIQSLCKLKRSE 269
L+ G K ++ E+ + ME ++ G + V++I ++ LC+
Sbjct: 449 LINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMIL 508
Query: 270 EAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFT 329
+A LL ++ G+ P++ TY LI+GF K GN+ GA KLF M G PDS +
Sbjct: 509 KAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI 568
Query: 330 YFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVT 365
L + G E AL++ + KG VP ST K+++T
Sbjct: 569 DGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 136/347 (39%), Gaps = 39/347 (11%)
Query: 75 RMAFSIAVSKLSQANHFNAISQLLEELKTRPDLRQNERFHVHSIVLYGQANMIDHAMQTF 134
R + + KL + N F ++L+ELK +E F V I Y +A M + A+++F
Sbjct: 93 RTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSV-LIEAYSEAGMDEKAVESF 151
Query: 135 EEMDKYGLRQSVDALNALLLGCILSKNYEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCE 194
M + + + A N +L + + + ++ + K + P+ TY +I C+
Sbjct: 152 SLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKC-NLNPDVVTYGILIHGLCK 210
Query: 195 SGDSSSVYSILAEMRRKSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNV 254
+ + + EM + I PN + ++L+G + K D ++ M G +
Sbjct: 211 TCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLIT 270
Query: 255 YNIRIQSLCK-----------------------------------LKRSEEAKALLDGML 279
YN+ + CK +R EEA ML
Sbjct: 271 YNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKML 330
Query: 280 SRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTYFLCQGGEYE 339
IKP++ Y +I G +EG + A L MT G PD+ C+ C G +
Sbjct: 331 RENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLD 390
Query: 340 TALKVCRASMAK-GWVPHFSTMKSLVTGLASISKVAEANELIGLMKK 385
A + R ++K P+ T L+ G+ + +A + M+K
Sbjct: 391 EA-ESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEK 436
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 110/271 (40%), Gaps = 37/271 (13%)
Query: 152 LLLGCILSKN-YEEVKRIFTEFPKVYGIEPNSETYNKVIKSFCESGDSSSVYSILAEMRR 210
L++G ++ +N +E ++ E K I+ +SE ++ +I+++ E+G + MR
Sbjct: 98 LIIGKLIKENAFELYWKVLQEL-KNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156
Query: 211 KSIRPNATDFGLLLAGFYKEHKYEDVGKVLQMMEKCGIASGVNVYNIRIQSLCKLKRSEE 270
+P+ F L+L ++ + V M KC + V Y I I LCK ++++
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216
Query: 271 AKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFASMTNGGCEPDSYCFFMFTY 330
A L D M RGI PN Y ++ G + + A++LF+ M GC D + +
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276
Query: 331 FLCQGGEYETALKVC--------------------------RASMAKGWV---------P 355
C+ G + A + R A W P
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKP 336
Query: 356 HFSTMKSLVTGLASISKVAEANELIGLMKKR 386
++ GL+ +V EA L+G M +R
Sbjct: 337 DVMLYTIMIRGLSQEGRVTEALTLLGEMTER 367
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%)
Query: 253 NVYNIRIQSLCKLKRSEEAKALLDGMLSRGIKPNLDTYKHLIHGFGKEGNLEGAKKLFAS 312
V ++ I L K E +L + + IK + + + LI + + G E A + F+
Sbjct: 94 TVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSL 153
Query: 313 MTNGGCEPDSYCFFMFTYFLCQGGEYETALKVCRASMAKGWVPHFSTMKSLVTGLASISK 372
M + C+PD + F + +FL + + AL V + P T L+ GL K
Sbjct: 154 MRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCK 213
Query: 373 VAEANELIGLMKKR 386
+A L M R
Sbjct: 214 TQDALVLFDEMTDR 227
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,732,183,063
Number of Sequences: 23463169
Number of extensions: 217985321
Number of successful extensions: 677233
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5412
Number of HSP's successfully gapped in prelim test: 3269
Number of HSP's that attempted gapping in prelim test: 591776
Number of HSP's gapped (non-prelim): 45597
length of query: 401
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 256
effective length of database: 8,957,035,862
effective search space: 2293001180672
effective search space used: 2293001180672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)