Citrus Sinensis ID: 015767

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-
MIVGQKMVAETEIICKATAVLDLGLQFNVKDQNLQIDVNLKNKNSSPPSTPRFHELRVSDSVSSEISCFESVVSCSETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKAFLLADLALADERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSLARGESCPPLQRRFRCASLSEEARNRLRSLLGGN
ccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccEEEEcccHHHccccccccccccEEEccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEccccccccccccHHHHHHHcccEEEccccccHHHHHHHcccccccccccccccccccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccEEEEEEcccccccccccHHHHHHHHHccHHHHHHHHHHHHccc
ccccccHHHHHHHHccccEEEEcccEEcccccccccccccEccccccccccccccEcccccccccccccccEcccccEEcccccccccccEEEEEEcccccccccccHHHcHEEEccccHHcccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEcccEEEEEEcccccEEEEcccEEEEcccccccccHHHHHHHHHcccEEEcccEccEEHHHHHcccccccccccccccccccccEEEEEEccccEEEEEEccccHEcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccccHHcccccHHHHHHHHHHHccc
MIVGQKMVAETEIICKATAVLDLglqfnvkdqnlqidvnlknknssppstprfhelrvsdsvsseiSCFESVVSCSETVKSTVMETSAVFVpiicsgscadigprismddehIRIDDLSAhlgslfkcptpsafyavfdghggpeAAVYVKENAMKLffkdadmpqtsdiNDVFLAELENSHKKAFLLADLAladersvsstcgtTALTALVLGRNLlvanagdcRAVLCRKGVavdmsqdhrpsylperRRVEELGGyirdgylngdlsvtralgdwdmklplgsaspliadpdvqqvvlteddeflIIGCDGIWDVMSSQHAVSLARrglrrhndpqQCARELVMEAshlnssdnLTVIVICFsslargescpplqrrfrCASLSEEARNRLRSLLGGN
mivgqkmvAETEIICKATAVLDLGLQFNVKDQNLQIDVNlknknssppstprfHELRVSDSVSSEISCFESVVSCSETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKAFLLADLALADERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVavdmsqdhrpsylperrrVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEashlnssdnLTVIVICFSSlargescpplQRRFRCASLSEEARNRlrsllggn
MIVGQKMVAETEIICKATAVLDLGLQFNVKDQNLQIDVNLKNKNSSPPSTPRFHELRVSDSVSSEISCFESVVSCSETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKaflladlaladERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSLARGESCPPLQRRFRCASLSEEARNRLRSLLGGN
******MVAETEIICKATAVLDLGLQFNVKDQNLQIDV***************************ISCFESVVSCSETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKAFLLADLALADERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDM********L**RRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLAR***************LVMEASHLNSSDNLTVIVICFSSLARGESC***************************
*******VAETEIICKATA*************************************************************************IICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDAD******I**VFLAELENSHKKAFLLADLALADE*S**STCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFS****************************RSLL***
MIVGQKMVAETEIICKATAVLDLGLQFNVKDQNLQIDVNLKNKNSSPPSTPRFHELRVSDSVSSEISCFESVVSCSETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKAFLLADLALADERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSLARGESCPPLQRRFRCASLSEEARNRLRSLLGGN
***GQKMVAETEIICKATAVLDLGLQFNVKDQ*************************************ESVVSCSETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKAFLLADLALADERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSL******************SEE******S*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MIVGQKMVAETEIICKATAVLDLGLQFNVKDQNLQIDVNLKNKNSSPPSTPRFHELRVSDSVSSEISCFESVVSCSETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKAFLLADLALADERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSLARGESCPPLQRRFRCASLSEEARNRLRSLLGGN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query401 2.2.26 [Sep-21-2011]
Q9LNF4383 Probable protein phosphat yes no 0.927 0.971 0.590 1e-123
Q3EAF9384 Probable protein phosphat no no 0.947 0.989 0.567 1e-120
Q9LUU7422 Probable protein phosphat no no 0.887 0.843 0.586 1e-114
Q9FYN7380 Probable protein phosphat yes no 0.778 0.821 0.658 1e-112
Q6AUQ4389 Probable protein phosphat no no 0.760 0.784 0.645 1e-110
P93006380 Probable protein phosphat no no 0.780 0.823 0.496 5e-86
Q9SD02361 Probable protein phosphat no no 0.728 0.808 0.479 1e-79
Q69VD9367 Probable protein phosphat no no 0.775 0.847 0.486 9e-73
Q5SMK6360 Probable protein phosphat no no 0.763 0.85 0.463 7e-72
Q69QZ0354 Probable protein phosphat no no 0.793 0.898 0.446 2e-71
>sp|Q9LNF4|P2C13_ARATH Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2 Back     alignment and function desciption
 Score =  443 bits (1139), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/410 (59%), Positives = 297/410 (72%), Gaps = 38/410 (9%)

Query: 1   MIVGQKMVAETEIICKATAVLDLGLQFNV-KDQ-NLQIDVNLKNKNSSPPSTPRFHELRV 58
           MI+ Q MVAE EI      VLD+    +  KDQ N QID                 E+RV
Sbjct: 1   MILSQTMVAEAEI-----RVLDVKCHISAPKDQKNFQID-----------------EVRV 38

Query: 59  SDSVSSEISC------FESVVSCSETVKSTVMETSAVFVPIICSGSCADIGPRISMDDEH 112
           S+SV +EIS       F S +SC   V +T+ E+++ F+P I SGS ADI  R +M+DEH
Sbjct: 39  SESVRAEISGSAETPRFGSGMSC---VTTTIGESASDFIPTIRSGSFADIRSRETMEDEH 95

Query: 113 IRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDIND 172
           I IDDLSAHLGS +    PSAFY VFDGHGGPEAA+++KEN  +LFF+DA  P+   I D
Sbjct: 96  ICIDDLSAHLGS-YNFSVPSAFYGVFDGHGGPEAAIFMKENLTRLFFQDAVFPEMPSIVD 154

Query: 173 VF-LAELENSHKKAFLLADLALADERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCR 231
            F L ELENSH+KAF LADLA+ADE  VS +CGTTALTAL++GR+LLVANAGDCRAVLCR
Sbjct: 155 AFFLEELENSHRKAFALADLAMADETIVSGSCGTTALTALIIGRHLLVANAGDCRAVLCR 214

Query: 232 KGVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLG-SASPL 290
           +GVAVDMS DHR +Y PERRR+E+LGGY  DGYLNG L+VTRA+GDW++K P   S+SPL
Sbjct: 215 RGVAVDMSFDHRSTYEPERRRIEDLGGYFEDGYLNGVLAVTRAIGDWELKNPFTDSSSPL 274

Query: 291 IADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEAS 350
           I+DP++ Q++LTEDDEFLI+ CDGIWDV+SSQ+AVS  R+GLRRH DP+QCA EL  EA+
Sbjct: 275 ISDPEIGQIILTEDDEFLILACDGIWDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKEAA 334

Query: 351 HLNSSDNLTVIVICFSSLARGESCPPLQRRFRCASLSEEARNRLRSLLGG 400
            L SSDN+TVIVICFSS+      P  QRR     +S+EAR RL+++L G
Sbjct: 335 RLQSSDNMTVIVICFSSVPSSPKQP--QRRRLRFCVSDEARARLQAMLAG 382

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q3EAF9|P2C49_ARATH Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1 Back     alignment and function description
>sp|Q9LUU7|P2C43_ARATH Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYN7|P2C02_ORYSJ Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1 Back     alignment and function description
>sp|Q6AUQ4|P2C47_ORYSJ Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1 Back     alignment and function description
>sp|P93006|P2C27_ARATH Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1 Back     alignment and function description
>sp|Q9SD02|P2C47_ARATH Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1 Back     alignment and function description
>sp|Q69VD9|P2C57_ORYSJ Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1 Back     alignment and function description
>sp|Q5SMK6|P2C54_ORYSJ Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1 Back     alignment and function description
>sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query401
345651734405 rfls10 protein [Glycine max] 0.987 0.977 0.7 1e-156
356529068405 PREDICTED: probable protein phosphatase 0.987 0.977 0.697 1e-156
224112040368 predicted protein [Populus trichocarpa] 0.907 0.989 0.725 1e-150
255556506375 protein phosphatase 2c, putative [Ricinu 0.932 0.997 0.701 1e-147
357448759368 hypothetical protein MTR_2g033000 [Medic 0.830 0.904 0.749 1e-144
356521692386 PREDICTED: probable protein phosphatase 0.952 0.989 0.654 1e-144
356565287380 PREDICTED: probable protein phosphatase 0.937 0.989 0.654 1e-142
255637121396 unknown [Glycine max] 0.970 0.982 0.634 1e-137
356534653396 PREDICTED: probable protein phosphatase 0.970 0.982 0.629 1e-137
357442115390 hypothetical protein MTR_1g086350 [Medic 0.955 0.982 0.624 1e-135
>gi|345651734|gb|AEO14877.1| rfls10 protein [Glycine max] Back     alignment and taxonomy information
 Score =  556 bits (1434), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 287/410 (70%), Positives = 331/410 (80%), Gaps = 14/410 (3%)

Query: 1   MIVGQKMVAETEIICKATAVLDLGLQFNVKDQNLQI----DVNLKNKNSSPPS--TPRFH 54
           MIV Q MV E EIICK    +      +VK  +L++     VN+K    SP S   P F 
Sbjct: 1   MIVSQNMVTEAEIICKQNIPM-----LDVKKYHLRVAQELGVNVKVVEVSPTSNGVPVFG 55

Query: 55  ELRVS-DSVSSEISCFESVVSCSETVKSTVMETSAV-FVPIICSGSCADIGPRISMDDEH 112
            +RVS +SVS+E + FESV+ CSE ++ +++ET A  F P + SG CADIGPR SMDDEH
Sbjct: 56  HVRVSSESVSTETTRFESVMGCSEMIEESIIETPATEFTPNVRSGRCADIGPRGSMDDEH 115

Query: 113 IRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDIND 172
           I+IDDL+AHLG +FK P PSAFYAVFDGHGGP+AA +VK NAM+L F+DADM Q+ D + 
Sbjct: 116 IQIDDLAAHLGFVFKHPMPSAFYAVFDGHGGPDAAAFVKNNAMRLLFEDADMLQSYDADA 175

Query: 173 VFLAELENSHKKAFLLADLALADERSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRK 232
            FL +LE+SH++AFL ADLALADE+SVSS+CGTTALTALVLGR+L+VANAGDCRAVLCR+
Sbjct: 176 PFLKKLEDSHRRAFLGADLALADEQSVSSSCGTTALTALVLGRHLMVANAGDCRAVLCRR 235

Query: 233 GVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGSASPLIA 292
           GVAVDMSQDHRPSYLPERRRVEELGG+I DGYLNG LSVTRALGDWD+KLPLGSASPLIA
Sbjct: 236 GVAVDMSQDHRPSYLPERRRVEELGGFIDDGYLNGYLSVTRALGDWDLKLPLGSASPLIA 295

Query: 293 DPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHL 352
           +PDVQ V LTEDDEFLIIGCDGIWDV+SSQ AVS  RRGLRRH+DPQQCARELV EA  L
Sbjct: 296 EPDVQVVTLTEDDEFLIIGCDGIWDVISSQDAVSFVRRGLRRHDDPQQCARELVKEALRL 355

Query: 353 NSSDNLTVIVICFSSLAR-GESCPPLQRRFRCASLSEEARNRLRSLLGGN 401
           ++SDNLTVIVIC S +    ESCPP +RRFR  SLSEEARNRLRSLL GN
Sbjct: 356 HTSDNLTVIVICLSPVQSIVESCPPQRRRFRACSLSEEARNRLRSLLEGN 405

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356529068|ref|XP_003533119.1| PREDICTED: probable protein phosphatase 2C 13-like [Glycine max] Back     alignment and taxonomy information
>gi|224112040|ref|XP_002316063.1| predicted protein [Populus trichocarpa] gi|222865103|gb|EEF02234.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255556506|ref|XP_002519287.1| protein phosphatase 2c, putative [Ricinus communis] gi|223541602|gb|EEF43151.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357448759|ref|XP_003594655.1| hypothetical protein MTR_2g033000 [Medicago truncatula] gi|355483703|gb|AES64906.1| hypothetical protein MTR_2g033000 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356521692|ref|XP_003529486.1| PREDICTED: probable protein phosphatase 2C 13-like [Glycine max] Back     alignment and taxonomy information
>gi|356565287|ref|XP_003550873.1| PREDICTED: probable protein phosphatase 2C 13-like [Glycine max] Back     alignment and taxonomy information
>gi|255637121|gb|ACU18892.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356534653|ref|XP_003535867.1| PREDICTED: probable protein phosphatase 2C 49-like [Glycine max] Back     alignment and taxonomy information
>gi|357442115|ref|XP_003591335.1| hypothetical protein MTR_1g086350 [Medicago truncatula] gi|355480383|gb|AES61586.1| hypothetical protein MTR_1g086350 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query401
TAIR|locus:2023812383 AT1G48040 [Arabidopsis thalian 0.917 0.960 0.571 3.1e-106
TAIR|locus:2098018384 AT3G62260 [Arabidopsis thalian 0.947 0.989 0.545 5.1e-106
TAIR|locus:2089035422 AT3G17250 [Arabidopsis thalian 0.887 0.843 0.570 1.7e-100
TAIR|locus:2057635380 PP2CG1 "protein phosphatase 2C 0.875 0.923 0.442 3.1e-76
TAIR|locus:2081785361 AT3G51470 [Arabidopsis thalian 0.735 0.817 0.474 2.4e-69
TAIR|locus:2050296392 DBP1 "DNA-binding protein phos 0.770 0.788 0.450 4.7e-64
ASPGD|ASPL0000056464420 AN1358 [Emericella nidulans (t 0.695 0.664 0.350 1.1e-34
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.533 0.688 0.381 4.6e-34
TAIR|locus:2047344355 AT2G25070 [Arabidopsis thalian 0.433 0.490 0.384 1e-32
FB|FBgn0035143352 Ppm1 "Ppm1" [Drosophila melano 0.638 0.727 0.329 7.7e-32
TAIR|locus:2023812 AT1G48040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
 Identities = 220/385 (57%), Positives = 280/385 (72%)

Query:    26 QFNVKDQNLQIDVNLKNKNSSPPSTPRFH--ELRVSDSVSSEISC------FESVVSCSE 77
             Q  V +  +++ +++K   S+P     F   E+RVS+SV +EIS       F S +SC  
Sbjct:     5 QTMVAEAEIRV-LDVKCHISAPKDQKNFQIDEVRVSESVRAEISGSAETPRFGSGMSC-- 61

Query:    78 TVKSTVMETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAV 137
              V +T+ E+++ F+P I SGS ADI  R +M+DEHI IDDLSAHLGS +    PSAFY V
Sbjct:    62 -VTTTIGESASDFIPTIRSGSFADIRSRETMEDEHICIDDLSAHLGS-YNFSVPSAFYGV 119

Query:   138 FDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVF-LAELENSHKKXXXXXXXXXXXE 196
             FDGHGGPEAA+++KEN  +LFF+DA  P+   I D F L ELENSH+K           E
Sbjct:   120 FDGHGGPEAAIFMKENLTRLFFQDAVFPEMPSIVDAFFLEELENSHRKAFALADLAMADE 179

Query:   197 RSVSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEEL 256
               VS +CGTTALTAL++GR+LLVANAGDCRAVLCR+GVAVDMS DHR +Y PERRR+E+L
Sbjct:   180 TIVSGSCGTTALTALIIGRHLLVANAGDCRAVLCRRGVAVDMSFDHRSTYEPERRRIEDL 239

Query:   257 GGYIRDGYLNGDLSVTRALGDWDMKLPL-GSASPLIADPDVQQVVLTEDDEFLIIGCDGI 315
             GGY  DGYLNG L+VTRA+GDW++K P   S+SPLI+DP++ Q++LTEDDEFLI+ CDGI
Sbjct:   240 GGYFEDGYLNGVLAVTRAIGDWELKNPFTDSSSPLISDPEIGQIILTEDDEFLILACDGI 299

Query:   316 WDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSLARGESCP 375
             WDV+SSQ+AVS  R+GLRRH DP+QCA EL  EA+ L SSDN+TVIVICFSS+       
Sbjct:   300 WDVLSSQNAVSNVRQGLRRHGDPRQCAMELGKEAARLQSSDNMTVIVICFSSVPSSPK-Q 358

Query:   376 PLQRRFRCASLSEEARNRLRSLLGG 400
             P +RR R   +S+EAR RL+++L G
Sbjct:   359 PQRRRLRFC-VSDEARARLQAMLAG 382
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
TAIR|locus:2098018 AT3G62260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089035 AT3G17250 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057635 PP2CG1 "protein phosphatase 2C G Group 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081785 AT3G51470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050296 DBP1 "DNA-binding protein phosphatase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000056464 AN1358 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2047344 AT2G25070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0035143 Ppm1 "Ppm1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FYN7P2C02_ORYSJ3, ., 1, ., 3, ., 1, 60.65820.77800.8210yesno
Q9LNF4P2C13_ARATH3, ., 1, ., 3, ., 1, 60.59020.92760.9712yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-100
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 6e-78
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-75
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 3e-62
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-40
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-26
PRK14559645 PRK14559, PRK14559, putative protein serine/threon 5e-04
smart00331193 smart00331, PP2C_SIG, Sigma factor PP2C-like phosp 0.001
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information 
 Score =  303 bits (777), Expect = e-100
 Identities = 160/348 (45%), Positives = 206/348 (59%), Gaps = 26/348 (7%)

Query: 67  SCFESVVSCSETVKSTVMETS-----------AVFVPIICSGSCADIGPRISMDDEHIRI 115
            C  S+V  S  VK+   + S             F+P++ SG+ ADIG R SM+D +I +
Sbjct: 27  CCKPSLVRHSSLVKTPASDISVENELTFENMDTEFIPVVRSGAWADIGSRSSMEDVYICV 86

Query: 116 DDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSDINDVFL 175
           D+  +  G       PSAFY VFDGHGG  AA +   +  +   +D D P+         
Sbjct: 87  DNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPR--------- 137

Query: 176 AELENSHKKAFLLADLALADERSVSS--TCGTTALTALVLGRNLLVANAGDCRAVLCRKG 233
            E+E     AFL  D A A+  S+ +    GTTAL ALV+GR+L+VANAGDCRAVLCR+G
Sbjct: 138 -EIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRG 196

Query: 234 VAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGS-ASPLIA 292
            A++MS+DH+P    ER+R+E  GGY+ DGYLNG L+V RALGDW M+   GS   PL A
Sbjct: 197 KAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSA 256

Query: 293 DPDVQQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLARRGLRRHNDPQQCARELVMEASHL 352
           +P++    LTE+DEFLIIGCDGIWDV  SQ+AV  ARR L+ HNDP  C++ELV EA   
Sbjct: 257 EPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR 316

Query: 353 NSSDNLTVIVICFSSLARGESCPPLQRRFRCASLSEEARNRLRSLLGG 400
            S DNL V+V+CF S        P  R  R  S+S E    L+S L  
Sbjct: 317 KSGDNLAVVVVCFQSQPPPNLVAPRPRVQR--SISAEGLRELQSFLDS 362

Length = 365
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|237756 PRK14559, PRK14559, putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|214624 smart00331, PP2C_SIG, Sigma factor PP2C-like phosphatases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 401
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.95
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.92
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.88
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.84
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.81
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.66
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.54
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.54
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.2e-57  Score=446.04  Aligned_cols=302  Identities=51%  Similarity=0.837  Sum_probs=255.7

Q ss_pred             cccccCeEEEEEeeccCCCCCCCcceEEecccccccCCCccCCCCCeEEEEEcCCCCchHHHHHHHHHHHHHHhccCCCC
Q 015767           87 SAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQ  166 (401)
Q Consensus        87 ~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~  166 (401)
                      ...|+|.++++.+|++|.|+.|||++++..++....+.......+..||||||||||+.+|++|++++.+.|.+...+. 
T Consensus        58 ~~~~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~-  136 (365)
T PLN03145         58 DTEFIPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFP-  136 (365)
T ss_pred             hhhccCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccc-
Confidence            3478899999999999999999999988776543322111122346899999999999999999999999987643221 


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHHHHHHhhccCCC--CCCCcceEEEEEeCCeEEEEEecCceEEEEecCeeeeCCCCCCC
Q 015767          167 TSDINDVFLAELENSHKKAFLLADLALADERSVS--STCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRP  244 (401)
Q Consensus       167 ~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~--~~~GtT~~~~li~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~  244 (401)
                               ..+.++|.++|..+|..+.+.....  ..||||+++++|.++++|+|||||||+|++|+|++++||+||+|
T Consensus       137 ---------~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~  207 (365)
T PLN03145        137 ---------REIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKP  207 (365)
T ss_pred             ---------hhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCC
Confidence                     2567889999999999987654322  35999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHHhCCeeecCeecCccccccccCCCCccCCCCC-CCCceeeeEEEEEEecCCCeEEEEecCCCCCCCCHHH
Q 015767          245 SYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGS-ASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSSQH  323 (401)
Q Consensus       245 s~~~e~~ri~~~gG~i~~~~~~g~~~ltralGd~~~k~~~~~-~~~v~~~Pdi~~~~l~~~d~fLlL~SDGlwd~l~~~e  323 (401)
                      ....|+.||.+.||.+..+++++.+++||+|||+.+|..++. ..+++++|++..+++.++|+|||||||||||+|++++
T Consensus       208 ~~~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee  287 (365)
T PLN03145        208 MCSKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQN  287 (365)
T ss_pred             CCHHHHHHHHHcCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHH
Confidence            999999999999999999999999999999999887642221 2357899999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEccCCCCCCCCCcccccccccCcCHHHHHHhhhhhcC
Q 015767          324 AVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSLARGESCPPLQRRFRCASLSEEARNRLRSLLGG  400 (401)
Q Consensus       324 i~~iv~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~  400 (401)
                      +.+++...+....+++++|+.|+++|+++++.||||||||+|...+++....++.+-+|  ++++|+|..|+++|++
T Consensus       288 ~v~~i~~~l~~~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  362 (365)
T PLN03145        288 AVDFARRRLQEHNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPPPNLVAPRPRVQR--SISAEGLRELQSFLDS  362 (365)
T ss_pred             HHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCCcccccccccccc--ccCHHHHHHHHHhhhc
Confidence            99999887777778999999999999999999999999999998655544444433332  7899999999999984

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 4e-31
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-30
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-30
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-29
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-25
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 2e-25
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-23
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-22
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-22
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-21
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 5e-20
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 6e-20
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 6e-20
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 6e-20
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 6e-20
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 7e-20
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 9e-09
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 5e-08
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 7e-07
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 8e-07
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 1e-06
2pom_A372 Tab1 With Manganese Ion Length = 372 2e-06
2j4o_A401 Structure Of Tab1 Length = 401 2e-06
2pk0_A250 Structure Of The S. Agalactiae Serine/threonine Pho 8e-06
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 146/300 (48%), Gaps = 45/300 (15%)
Query: 93  IICSGSCADIGPRISMDDEH---IRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVY 149
            + SGS +  G RIS +D H   +  DD         +C    +F+AV+DGHGG E A Y
Sbjct: 22  FLASGSSSMQGWRISQEDAHNCILNFDD---------QC----SFFAVYDGHGGAEVAQY 68
Query: 150 VK----------ENAMKLFFKDADMPQTSDINDVFLAELENSHKKXXXXXXXXXXXERSV 199
                       E   +  F+ A        +   L E      K           E   
Sbjct: 69  CSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGK 128
Query: 200 SSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGY 259
            S C  TA+ AL+ G++L VANAGD R V+CR G A++MS DH+P    E +R+E+ GG 
Sbjct: 129 DSGC--TAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGR 186
Query: 260 IR-DGYLNGDLSVTRALGD--WDMKLPLGSASPLI-ADPDVQQVVLTEDDEFLIIGCDGI 315
           +  DG +NG L+++RA+GD  + M   L +   +I A PD++++ +  +DEF+++ CDGI
Sbjct: 187 VTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGI 246
Query: 316 WDVMSSQHAVSLARRGLRRHNDPQQCARELVME------ASHLNSS----DNLTVIVICF 365
           W+ M+S+  V   +    R N P     ++  E      A H        DN+T I++ F
Sbjct: 247 WNFMTSEQVVQFVQ---ERINKPGMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQF 303
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine Phosphatase At 2.65 Resolution Length = 250 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-111
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-110
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-102
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 3e-99
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 2e-97
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 6e-97
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 3e-95
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 5e-95
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 7e-80
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 7e-69
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 9e-69
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 9e-64
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-46
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-19
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 5e-17
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-15
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 2e-14
3rnr_A211 Stage II sporulation E family protein; structural 6e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
 Score =  330 bits (847), Expect = e-111
 Identities = 85/319 (26%), Positives = 151/319 (47%), Gaps = 16/319 (5%)

Query: 85  ETSAVFVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGP 144
             +      +  G  +  G R+ M+D H  +  L + L S        +F+AV+DGH G 
Sbjct: 13  HNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESW-------SFFAVYDGHAGS 65

Query: 145 EAAVYVKENAMKLFFKDADMPQTSDINDVFLAELENSHKKAFLLAD---LALADERSVSS 201
           + A Y  E+ +     + D   ++      +  ++N  +  FL  D     +++++  + 
Sbjct: 66  QVAKYCCEHLLDHITNNQDFKGSAGAPS--VENVKNGIRTGFLEIDEHMRVMSEKKHGAD 123

Query: 202 TCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGYIR 261
             G+TA+  L+  ++    N GD R +LCR       +QDH+PS   E+ R++  GG + 
Sbjct: 124 RSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM 183

Query: 262 DGYLNGDLSVTRALGDWDMKLPLG---SASPLIADPDVQQVVLT-EDDEFLIIGCDGIWD 317
              +NG L+V+RALGD+D K   G   +   +  +P+V  +  + EDD+F+I+ CDGIWD
Sbjct: 184 IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWD 243

Query: 318 VMSSQHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSLARGESCPPL 377
           VM ++      R  L   +D ++   E+V    +  S DN++VI+ICF +  +       
Sbjct: 244 VMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPEAVK 303

Query: 378 QRRFRCASLSEEARNRLRS 396
           +       L       ++ 
Sbjct: 304 KEAELDKYLECRVEEIIKK 322
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query401
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.89
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.87
3f79_A255 Probable two-component response regulator; adaptor 99.78
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.75
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.35
3eq2_A394 Probable two-component response regulator; adaptor 98.52
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=3.5e-51  Score=396.83  Aligned_cols=271  Identities=29%  Similarity=0.514  Sum_probs=227.4

Q ss_pred             cCeEEEEEeeccCCCCCCCcceEEecccccccCCCccCCCCCeEEEEEcCCCCchHHHHHHHHHHHHHHhccCCCCCCC-
Q 015767           91 VPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSD-  169 (401)
Q Consensus        91 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~-  169 (401)
                      ...++++..+++|+|..|||++++..++...       ..+..+|+|||||||+.+|++|++.+++.|.+...+..... 
T Consensus        21 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~-------~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~   93 (307)
T 2p8e_A           21 GNGLRYGLSSMQGWRVEMEDAHTAVVGIPHG-------LEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKS   93 (307)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETTT-------EEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----
T ss_pred             CCCeeEEEEecCCCCCcccceEEEEecCCCC-------CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccc
Confidence            3578999999999999999999886543210       12367999999999999999999999999976322221100 


Q ss_pred             --chhHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCCcceEEEEEeCCeEEEEEecCceEEEEecCeeeeCCCCCCC
Q 015767          170 --INDVFLAELENSHKKAFLLADLALADERSV---SSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRP  244 (401)
Q Consensus       170 --~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~---~~~~GtT~~~~li~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~  244 (401)
                        ......+.+.++|+++|..+|+.|.+....   ...+|||++++++.++++|+|||||||+|++|+|++++||+||++
T Consensus        94 ~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~  173 (307)
T 2p8e_A           94 GSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP  173 (307)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCT
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCC
Confidence              001112467889999999999999876532   246999999999999999999999999999999999999999999


Q ss_pred             CChhHHHHHHHhCCeeecCeecCccccccccCCCCccCCCCC---CCCceeeeEEEEEEecCCCeEEEEecCCCCCCCCH
Q 015767          245 SYLPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGS---ASPLIADPDVQQVVLTEDDEFLIIGCDGIWDVMSS  321 (401)
Q Consensus       245 s~~~e~~ri~~~gG~i~~~~~~g~~~ltralGd~~~k~~~~~---~~~v~~~Pdi~~~~l~~~d~fLlL~SDGlwd~l~~  321 (401)
                      ..+.|+.||.+.||.+..++++|.+.+|||||+..+|.+.+.   .+.++++|++..+++.++|+|||||||||||++++
T Consensus       174 ~~~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~  253 (307)
T 2p8e_A          174 CNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSN  253 (307)
T ss_dssp             TSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCH
T ss_pred             CCHHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCH
Confidence            999999999999999999999999999999999998864322   24578999999999999998999999999999999


Q ss_pred             HHHHHHHHHhhhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEccCC
Q 015767          322 QHAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSL  368 (401)
Q Consensus       322 ~ei~~iv~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~  368 (401)
                      +++.+++...+....+++++|++|++.|+++|+.||||||||++...
T Consensus       254 ~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~  300 (307)
T 2p8e_A          254 EELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNE  300 (307)
T ss_dssp             HHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC---
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCC
Confidence            99999998876666799999999999999999999999999999764
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 401
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-54
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-22
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (456), Expect = 2e-54
 Identities = 84/279 (30%), Positives = 143/279 (51%), Gaps = 16/279 (5%)

Query: 97  GSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMK 156
           G  +  G R+ M+D H  +  L + L S        +F+AV+DGH G + A Y  E+ + 
Sbjct: 24  GLSSMQGWRVEMEDAHTAVIGLPSGLESW-------SFFAVYDGHAGSQVAKYCCEHLLD 76

Query: 157 LFFKDADMPQTSDINDVFLAELENSHKKAFLLAD---LALADERSVSSTCGTTALTALVL 213
               + D   ++      +  ++N  +  FL  D     +++++  +   G+TA+  L+ 
Sbjct: 77  HITNNQDFKGSAGAPS--VENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLIS 134

Query: 214 GRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSYLPERRRVEELGGYIRDGYLNGDLSVTR 273
            ++    N GD R +LCR       +QDH+PS   E+ R++  GG +    +NG L+V+R
Sbjct: 135 PQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSR 194

Query: 274 ALGDWDMKLPLGSASP---LIADPDVQQVVLT-EDDEFLIIGCDGIWDVMSSQHAVSLAR 329
           ALGD+D K   G       +  +P+V  +  + EDD+F+I+ CDGIWDVM ++      R
Sbjct: 195 ALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVR 254

Query: 330 RGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSL 368
             L   +D ++   E+V    +  S DN++VI+ICF + 
Sbjct: 255 SRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA 293
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query401
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-54  Score=411.96  Aligned_cols=271  Identities=30%  Similarity=0.514  Sum_probs=232.9

Q ss_pred             ccCeEEEEEeeccCCCCCCCcceEEecccccccCCCccCCCCCeEEEEEcCCCCchHHHHHHHHHHHHHHhccCCCCCCC
Q 015767           90 FVPIICSGSCADIGPRISMDDEHIRIDDLSAHLGSLFKCPTPSAFYAVFDGHGGPEAAVYVKENAMKLFFKDADMPQTSD  169 (401)
Q Consensus        90 ~~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~~~~  169 (401)
                      ....++||+++.+|+|++|||++++..++...       ..+..||||||||||+.++++|++++++.|.+.........
T Consensus        17 ~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~-------~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~   89 (295)
T d1a6qa2          17 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSG-------LESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAG   89 (295)
T ss_dssp             EETTEEEEEEEEEETSSSCCEEEEEEEEETTT-------EEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSS
T ss_pred             cCCceEEEEEeCccCCCcccCeeEEEcccCCC-------CCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccc
Confidence            33578999999999999999999887654321       12468999999999999999999999999876432211111


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhccC---CCCCCCcceEEEEEeCCeEEEEEecCceEEEEecCeeeeCCCCCCCCC
Q 015767          170 INDVFLAELENSHKKAFLLADLALADERS---VSSTCGTTALTALVLGRNLLVANAGDCRAVLCRKGVAVDMSQDHRPSY  246 (401)
Q Consensus       170 ~~~~~~~~~~~~l~~a~~~~~~~l~~~~~---~~~~~GtT~~~~li~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~s~  246 (401)
                        ....+.+.++|+++|..+++.+.....   ....+|||++++++.++++|+|||||||+|++|+|++++||.||+|+.
T Consensus        90 --~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~  167 (295)
T d1a6qa2          90 --APSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSN  167 (295)
T ss_dssp             --SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTS
T ss_pred             --cchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCccc
Confidence              112246788999999999988864332   235699999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHhCCeeecCeecCccccccccCCCCccCCCCC---CCCceeeeEEEEEEec-CCCeEEEEecCCCCCCCCHH
Q 015767          247 LPERRRVEELGGYIRDGYLNGDLSVTRALGDWDMKLPLGS---ASPLIADPDVQQVVLT-EDDEFLIIGCDGIWDVMSSQ  322 (401)
Q Consensus       247 ~~e~~ri~~~gG~i~~~~~~g~~~ltralGd~~~k~~~~~---~~~v~~~Pdi~~~~l~-~~d~fLlL~SDGlwd~l~~~  322 (401)
                      ..|+.||.+.||.+...+++|.+.+||+|||+.+|...+.   .+.+++.|++..+.+. ++|.|||||||||||+|+++
T Consensus       168 ~~E~~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~  247 (295)
T d1a6qa2         168 PLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNE  247 (295)
T ss_dssp             HHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHH
T ss_pred             HHHHhhHhhcCCcccccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHH
Confidence            9999999999999999999999999999999999865432   4569999999999985 66779999999999999999


Q ss_pred             HHHHHHHHhhhcCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEccCCC
Q 015767          323 HAVSLARRGLRRHNDPQQCARELVMEASHLNSSDNLTVIVICFSSLA  369 (401)
Q Consensus       323 ei~~iv~~~l~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~  369 (401)
                      |+.++++..+....+++.+|+.|+++|+++++.||||||||+|+..+
T Consensus       248 ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         248 ELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSC
T ss_pred             HHHHHHHHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCCC
Confidence            99999998888888999999999999999999999999999998654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure