BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015768
(400 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 186/377 (49%), Gaps = 20/377 (5%)
Query: 21 QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
++ ++ G K+ +SL G + P+ E KE + D ++ YG + GL ELR+A+ +K
Sbjct: 17 KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEK 75
Query: 81 LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
L ++N + K+ +MV GANQAF+ + G+ V++ P + + + + G
Sbjct: 76 LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 135
Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
+ V + D L+K + K +++ +P NP+G + ++ L+ I+D
Sbjct: 136 VEVPTYEEDEFRLNVDELKKYVTDKTRALIIN--SPCNPTGAVLTKKDLEEIADFVVEHD 193
Query: 198 SWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252
++ D YE+F+YD +H + + + + FSK + M GWR+G++A PS +
Sbjct: 194 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 251
Query: 253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 310
+++K Q C Q+ A +L+ W V E K+ R R+++ + L+ +G
Sbjct: 252 -IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 310
Query: 311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 368
VK +GA Y++ R+ + L + + V V+PG A G G++RIS+
Sbjct: 311 PTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAY 369
Query: 369 EDDCKAAADRLRRGLEE 385
E + A DR+ R L+E
Sbjct: 370 E-KLEEAMDRMERVLKE 385
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 186/377 (49%), Gaps = 20/377 (5%)
Query: 21 QIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80
++ ++ G K+ +SL G + P+ E KE + D ++ YG + GL ELR+A+ +K
Sbjct: 16 KLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEK 74
Query: 81 LNQENKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137
L ++N + K+ +MV GANQAF+ + G+ V++ P + + + + G
Sbjct: 75 LKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKP 134
Query: 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
+ V + D L+K + K +++ +P NP+G + ++ L+ I+D
Sbjct: 135 VEVPTYEEDEFRLNVDELKKYVTDKTRALIIN--SPCNPTGAVLTKKDLEEIADFVVEHD 192
Query: 198 SWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252
++ D YE+F+YD +H + + + + FSK + M GWR+G++A PS +
Sbjct: 193 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-- 250
Query: 253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGE 310
+++K Q C Q+ A +L+ W V E K+ R R+++ + L+ +G
Sbjct: 251 -IERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGL 309
Query: 311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLV 368
VK +GA Y++ R+ + L + + V V+PG A G G++RIS+
Sbjct: 310 PTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAY 368
Query: 369 EDDCKAAADRLRRGLEE 385
E + A +R+ R L+E
Sbjct: 369 E-KLEEAMERMERVLKE 384
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 12/380 (3%)
Query: 10 RALETEMPIMVQIQ--ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
+A++ + P+ V + EL R + V+L G + P+ E + + +KY
Sbjct: 9 QAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPP 67
Query: 68 EGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
G+PELR+AL +K +EN L +VT G +QA N+ + D GD V++ +PY+ +
Sbjct: 68 AGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVS 127
Query: 126 SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185
+ G + V + PD + + + + P K + V +P NP+G P+ +
Sbjct: 128 YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEV 185
Query: 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGY 243
L+ ++ L +LV D YE+ +Y+G V +H + + +KA+ M GWR+GY
Sbjct: 186 LEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGY 245
Query: 244 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303
P EV + + P + + AL + + +V + R R+++ E
Sbjct: 246 ACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLE 305
Query: 304 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 363
L+ LG AV+ GA Y+ D+ L GV V+PG GH+R+S
Sbjct: 306 GLTALGLKAVRPS-GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLS 363
Query: 364 FGGLVEDDCKAAADRLRRGL 383
+ E++ + A +R R L
Sbjct: 364 Y-ATSEENLRKALERFARVL 382
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 10/364 (2%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G +QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
D YE+ +Y+G V +H + + +KA+ M GWR+GY P EV + +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261
Query: 260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319
P + + AL + + +V + R R+++ E L+ LG AV+ GA
Sbjct: 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS-GA 320
Query: 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379
Y+ D+ L GV V+PG GH+R+S+ E++ + A +R
Sbjct: 321 FYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKALERF 378
Query: 380 RRGL 383
R L
Sbjct: 379 ARVL 382
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 10/364 (2%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G +QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
D YE+ +Y+G V +H + + +KA+ M GWR+GY P EV + +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSR 261
Query: 260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319
P + + AL + + +V + R R+++ E L+ LG AV+ GA
Sbjct: 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS-GA 320
Query: 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379
Y+ D+ L GV V+PG GH+R+S+ E++ + A +R
Sbjct: 321 FYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKALERF 378
Query: 380 RRGL 383
R L
Sbjct: 379 ARVL 382
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 166/367 (45%), Gaps = 16/367 (4%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G +QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
D YE+ +Y+G V +H + + +KA+ M GWR+GY P EV +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 260 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 316
V I+Q L +L Q E ++ R R+++ E L+ LG AV+
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
GA Y+ D+ L GV V+PG GH+R+S+ E++ + A
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 377 DRLRRGL 383
+R R L
Sbjct: 376 ERFARVL 382
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 165/367 (44%), Gaps = 16/367 (4%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
D YE+ +Y+G V +H + + +KA+ M GWR+GY P EV +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 260 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 316
V I+Q L +L Q E ++ R R+++ E L+ LG AV+
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
GA Y+ D+ L GV V+PG GH+R+S+ E++ + A
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 377 DRLRRGL 383
+R R L
Sbjct: 376 ERFARVL 382
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 181/380 (47%), Gaps = 20/380 (5%)
Query: 6 KLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG 65
++++ + M + + + L++ ++ ++L G + P+ +E+ + + KY
Sbjct: 17 RISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEV-KYT 75
Query: 66 ADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
G+ ELR+ + K++ + K + V+VT GA QA N + L D GD V++F+P +
Sbjct: 76 DPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVW 135
Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183
+ + G T +V SK P + +E L K K V + +P NP+G
Sbjct: 136 VSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK--TKAVLINSPNNPTGVVYRR 193
Query: 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---EG-DHVVNLFSFSKAYGMMGW 239
L+ + L K +++ D Y+ +Y + EG D +V + FSK++ M GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299
RVGY+ +V AT + K+Q + C + ++Q+ AL +L+ ++ + K+ +
Sbjct: 254 RVGYLISSEKV---ATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKE---RKN 307
Query: 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359
+ E L +G V+ EGA YL+ ++ DD + L V ++PG A G
Sbjct: 308 FVVERLKKMGVKFVE-PEGAFYLFFKV---RGDDVKFCERLLEEKKVALVPGSAFLKPGF 363
Query: 360 LRISFGGLVEDDCKAAADRL 379
+R+SF +E A DR+
Sbjct: 364 VRLSFATSIE-RLTEALDRI 382
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 164/367 (44%), Gaps = 16/367 (4%)
Query: 24 ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83
EL R + V+L G + P+ E + + +KY G+PELR+AL +K +
Sbjct: 25 ELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEKFRR 83
Query: 84 ENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141
EN L +VT G QA N+ + D GD V++ +PY+ + + G + V
Sbjct: 84 ENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVE 143
Query: 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201
+ PD + + + + P K + V +P NP+G P+ +L+ ++ L +LV
Sbjct: 144 TLPEEGFVPDPERVRRAI--TPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201
Query: 202 VDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259
D YE+ +Y+G V +H + + + A+ M GWR+GY P EV +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAXAFAMTGWRIGYACGPKEV---IKAMAS 258
Query: 260 VQDNIPICASIISQHLALYSL--QTGPEWVTERVKDLV-RNREIIREALSPLGEGAVKGG 316
V I+Q L +L Q E ++ R R+++ E L+ LG AV+
Sbjct: 259 VSSQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALGLKAVRPS 318
Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376
GA Y+ D+ L GV V+PG GH+R+S+ E++ + A
Sbjct: 319 -GAFYVLMDTSPIAPDEVRAAERLLE-AGVAVVPGTDFAAFGHVRLSY-ATSEENLRKAL 375
Query: 377 DRLRRGL 383
+R R L
Sbjct: 376 ERFARVL 382
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 181/397 (45%), Gaps = 30/397 (7%)
Query: 6 KLAKRALETEMPIMVQIQELVRGAKNA-----VSLAQGVVYWQPPKMAMEKVKELVWDPS 60
KLA R +E+ P M I + A A S + G + PK +E K + +
Sbjct: 2 KLAAR-VESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAAL-EQG 59
Query: 61 ISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
++YG G P LR+A+ +KL ++N L +++VT G Q+ N++L + + GD V++
Sbjct: 60 KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVII 119
Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
AP++ + ++ T +++ + + + + P KL+ P NP+G
Sbjct: 120 PAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAI--TPKTKLLVFNTPSNPTG 177
Query: 179 -TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG------DHVVNLFSFS 231
Y P+ + + I+ + AG W++ D YE +YD +H + + V F+
Sbjct: 178 MVYTPDEV-RAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA 236
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERV 291
K Y M GWRVG++A P + AT K+Q + +Q+ A+ + + + V E +
Sbjct: 237 KTYAMTGWRVGFLAGPVPLVKAAT---KIQGHSTSNVCTFAQYGAIAAYENSQDCVQEML 293
Query: 292 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
R + +AL+ + +GA Y++ + + + L +H V +PG
Sbjct: 294 AAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPG 353
Query: 352 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
A G +R+S+ + D ++RG+E L K
Sbjct: 354 AAFGADDCIRLSYATDL--------DTIKRGMERLEK 382
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 191/413 (46%), Gaps = 46/413 (11%)
Query: 6 KLAKRALETEMPI---MVQIQELVRGAKNAVSLAQG---VVYWQPPKMAMEKVKELVWDP 59
+ +KRAL E I ++ +EL + + L G +QPP+ E + + +
Sbjct: 11 RASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKE- 69
Query: 60 SISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV 117
+ YG EGLPELR A+V++ ++N + V VTA +A I L D GD ++
Sbjct: 70 GHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEIL 129
Query: 118 MFAPYYFNSYMSFQMTGVTHILVG-PCSSKTL-----HPDADWLEKTLETKPTPKLVSVV 171
+ P SY + TG+ G P +T+ PD D + K + + K ++V+
Sbjct: 130 VPGP----SYPPY--TGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRT--KAIAVI 181
Query: 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVEGDHVVNLF 228
NP NP+G ++ L+ I ++ ++ D Y+ Y+G + V+ +
Sbjct: 182 NPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMN 241
Query: 229 SFSKAYGMMGWRVGYIAYP------SEVEGFATQLLKVQDNIPICASIISQHLALYSLQT 282
SK Y GWR+GY+ + SEV +L +++ +C + +Q A+ L T
Sbjct: 242 GLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR----LCPNTPAQFAAIAGL-T 296
Query: 283 GP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL---PEKHLDDFEVVR 338
GP +++ E +K L R+ I + L+ + + +GA Y++ ++ P K +D E V
Sbjct: 297 GPMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWK--NDKEFVL 354
Query: 339 WLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389
+ H V+ + G G GH R F +E + A DR + ++E +K+
Sbjct: 355 DVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIE-ILEEAMDRFEKFMKERLKE 406
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 156/380 (41%), Gaps = 29/380 (7%)
Query: 18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
I Q+ L + A++L+QG + P+ E++ V ++Y G+ LR+A+
Sbjct: 19 IFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQ-GANQYAPMTGVQALREAI 76
Query: 78 VKKLNQENKLY------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ 131
+K +LY S + VTAGA +A + L GD V+ F P Y + +
Sbjct: 77 AQK---TERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIA 133
Query: 132 MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
++G +V + + H DW E +LV + P NPS T + +
Sbjct: 134 LSGG---IVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQ 190
Query: 192 LCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAY 246
+++ D YE+ + + H V + V + SF K Y M GW+VGY
Sbjct: 191 AIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA 250
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
P+ + + ++ KV + + +Q L+ PE + R+I+ AL+
Sbjct: 251 PAPI---SAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALN 307
Query: 307 PLGEGAVKGGEGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGA-CG---CRGHLR 361
+ EG +L LDD E +WL HGV IP C +R
Sbjct: 308 E-SRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIR 366
Query: 362 ISFGGLVEDDCKAAADRLRR 381
+ F E AAA+RLR+
Sbjct: 367 LCFAK-KESTLLAAAERLRQ 385
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 168/384 (43%), Gaps = 34/384 (8%)
Query: 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86
R ++ + L+ G P +EK+ + Y G+P LR A+
Sbjct: 34 RRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYD 93
Query: 87 LY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
+ +S +VT G+ + +++L D GD++++ P Y + G I
Sbjct: 94 VQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSY-----PIHIYGAV-IAGAQV 147
Query: 144 SSKTLHPDADW---LEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199
S L P D+ LE+ + E+ P P+++ + P NP+ + +R+ L K
Sbjct: 148 RSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVM 207
Query: 200 LVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254
+V D Y +YDG K + D V F+ SK+Y M GWR+G++ E+
Sbjct: 208 VVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPEL---V 264
Query: 255 TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314
+ L +++ Q A+ +L+ + V + + + R+++ + L G V+
Sbjct: 265 SALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-WMVE 323
Query: 315 GGEGAIYLWARLPE--KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC 372
+ ++Y+WA++PE HL E + L V V PG G G + F L+E+
Sbjct: 324 NPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRF-ALIEN-- 380
Query: 373 KAAADRLR---RGLEELVK-DGMV 392
DRLR RG++ + + DG++
Sbjct: 381 ---RDRLRQAVRGIKAMFRADGLL 401
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 173/395 (43%), Gaps = 46/395 (11%)
Query: 7 LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPK-MAMEKVKELVWDPSI 61
L+KR L E M I+ Q+L K + L G + PK + E +K L
Sbjct: 2 LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSL--KEGK 59
Query: 62 SKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119
+ Y G+ ELR+ + + + K + ++++T G++ + ++ D GD V++
Sbjct: 60 THYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQ 119
Query: 120 APYY--FNSYMSFQMTGVTHILVGPCSSKTLHPD--ADWLEKTLETKPTPKLVSVVNPGN 175
P Y + +++ F +K + D + LE+ L K K + + +P N
Sbjct: 120 NPCYPCYKNFIRF------------LGAKPVFCDFTVESLEEALSDKT--KAIIINSPSN 165
Query: 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH----VVNLFSFS 231
P G I + I + +++ D Y +Y+G+ + +E D + + FS
Sbjct: 166 PLGEVID----REIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFS 221
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW-VTER 290
Y M GWR+GY+ E+ +LK+Q N+ I A ISQ+ AL + + E +
Sbjct: 222 XLYAMTGWRIGYVISNDEI---IEAILKLQQNLFISAPTISQYAALKAFEKETEREINSM 278
Query: 291 VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 350
+K+ R R ++ + + G V GA Y++ + E D E L V + P
Sbjct: 279 IKEFDRRRRLVLKYVKDFG-WEVNNPIGAYYVFPNIGE---DGREFAYKLLKEKFVALTP 334
Query: 351 GGACGCRG--HLRISFGGLVEDDCKAAADRLRRGL 383
G G +G ++RIS+ E + K +R++ L
Sbjct: 335 GIGFGSKGKNYIRISYANSYE-NIKEGLERIKEFL 368
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 40/362 (11%)
Query: 26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYGADEGLPELRDALVKKLN 82
+ G +N + G P++ + +KELV D ++ Y + +G E R A+ + LN
Sbjct: 31 IVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLN 90
Query: 83 QENKLY--KSSVMVTAGANQAFVNIVLTLC------DAGDSVVMFAPYYFNSYMSFQMTG 134
+ + ++ T GA + L++C DA D + APY F Y F
Sbjct: 91 NTHGTHFNADNLYXTXGAAAS-----LSICFRALTSDAYDEFITIAPY-FPEYKVFVNAA 144
Query: 135 VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194
++ P ++ D D LE+ + + V + +P NPSGT E +K++SDL +
Sbjct: 145 GARLVEVPADTEHFQIDFDALEERINAHT--RGVIINSPNNPSGTVYSEETIKKLSDLLE 202
Query: 195 AAGS------WLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGYIAY 246
+++ D Y +YDG K V D+ + +S+SK+ + G R+GY+
Sbjct: 203 KKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLV 262
Query: 247 PSEV----EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302
P EV E +A + +CA + Q + + T + NR+++
Sbjct: 263 PDEVYDKAELYAAVCGAGRALGYVCAPSLFQKXIVKC-----QGATGDINAYKENRDLLY 317
Query: 303 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 362
E L+ +G K +GA Y + + E DD A V+++ GC G +RI
Sbjct: 318 EGLTRIGYHCFK-PDGAFYXFVKALE---DDSNAFCEKAKEEDVLIVAADGFGCPGWVRI 373
Query: 363 SF 364
S+
Sbjct: 374 SY 375
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 13/223 (5%)
Query: 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS 90
AV+L QG PP +E V+ + +Y GLP LR+AL ++ E +
Sbjct: 26 GAVNLGQGFPSNPPPPFLLEAVRRALG--RQDQYAPPAGLPALREALAEEFAVEPE---- 79
Query: 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM--SFQMTGVTHILVGPCSSKTL 148
SV+VT+GA +A ++ +L GD VV+ P +F+ Y+ +F ++ + +
Sbjct: 80 SVVVTSGATEALYVLLQSLVGPGDEVVVLEP-FFDVYLPDAFLAGAKARLVRLDLTPEGF 138
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208
D LEK L P + + + P NP+G ER L+ I+ L +A +L+ D Y+
Sbjct: 139 RLDLSALEKAL--TPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDE 196
Query: 209 FMYDGRKHCCVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249
Y R E + + S K G+RVG+I P E
Sbjct: 197 LYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE 239
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 167/413 (40%), Gaps = 39/413 (9%)
Query: 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
AKR + + V+ +L + V+L QG PP E++ + + ++++Y
Sbjct: 2 AKRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60
Query: 68 EGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
G P L AL K+ Q ++V GA + N + L D GD V++ P+Y
Sbjct: 61 FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 125 NSYMSFQMTGVTHILVGPCSSKTLH----PDADWL--EKTLETKPTPKLVSVV--NPGNP 176
+M G + + P SK +DW + LE+K + K +++ P NP
Sbjct: 121 CYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFS 231
G + L+ I+DLC + + D YE+ +Y G H + + + + S
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPE 285
K + + GW++G+ P+ + L VQ N P+ A++ PE
Sbjct: 240 KTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296
Query: 286 -WVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI----YLWARLPEKHLD---DFE 335
+ K+L R+ + L+ +G + GG I L A L + + D D++
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYK 356
Query: 336 VVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
V+W+ + IP A C + F LV C D EE+ +
Sbjct: 357 FVKWMTKHKKLTAIPVSAF-CDSKSKPHFEKLVR-FCFIKKDSTLDAAEEIFR 407
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 166/395 (42%), Gaps = 49/395 (12%)
Query: 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKL 87
+ ++L QG + PP+ A+++ ++ + P +++Y G P L ++L+K + +L
Sbjct: 57 RELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTEL 116
Query: 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGP--- 142
+V VT GAN+ ++ ++ L +AGD V++F P++ + ++ G V ++ + P
Sbjct: 117 KAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKE 176
Query: 143 -----CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
+ D + EK + +K K V + P NP G L + ++C
Sbjct: 177 LDQRNTRGEEWTIDFEQFEKAITSK--TKAVIINTPHNPIGKVFTREELTTLGNICVKHN 234
Query: 198 SWLVVDNTYE--YFMYDGRKHCCVE---GDHVVNLFSFSKAYGMMGWRVGYI-AYPSEVE 251
++ D YE YF + + G + + S ++ GWR+G++ + +E+
Sbjct: 235 VVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGWVLSLNAELL 294
Query: 252 GFATQL---LKVQDNIPI---CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
+A + + P+ CA+ I+ L + + + ++ + +I
Sbjct: 295 SYAAKAHTRICFASPSPLQEACANSINDALKI-------GYFEKMRQEYINKFKIFTSIF 347
Query: 306 SPLGEGAVKGGEGAIYLWARL-----------PEKHLD---DFEVVRWLAHRHGVVVIPG 351
LG EG ++ PE+ L+ DF + WL + GVV IP
Sbjct: 348 DELGL-PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPP 406
Query: 352 GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
+ H + + L CK A L +E L
Sbjct: 407 TEFYIKEHEKAAENLLRFAVCKDDA-YLENAVERL 440
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 166/413 (40%), Gaps = 39/413 (9%)
Query: 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD 67
AKR + + V+ +L + V+L QG PP E++ + + ++++Y
Sbjct: 2 AKRIEGLDSNVWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG 60
Query: 68 EGLPELRDAL---VKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124
G P L AL K+ Q ++V GA + N + L D GD V++ P+Y
Sbjct: 61 FGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYD 120
Query: 125 NSYMSFQMTGVTHILVGPCSSKTLH----PDADWL--EKTLETKPTPKLVSVV--NPGNP 176
+M G + + P SK +DW + LE+K + K +++ P NP
Sbjct: 121 CYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNP 179
Query: 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFS 231
G + L+ I+DLC + + D YE+ +Y G H + + + + S
Sbjct: 180 LGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAG 239
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------IPICASIISQHLALYSLQTGPE 285
+ + GW++G+ P+ + L VQ N P+ A++ PE
Sbjct: 240 XTFSVTGWKLGWSIGPAHL---IKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPE 296
Query: 286 -WVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAI----YLWARLPEKHLD---DFE 335
+ K+L R+ + L+ +G + GG I L A L + + D D++
Sbjct: 297 CYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYK 356
Query: 336 VVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
V+W+ + IP A C + F LV C D EE+ +
Sbjct: 357 FVKWMTKHKKLTAIPVSAF-CDSKSKPHFEKLVR-FCFIKKDSTLDAAEEIFR 407
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 143/351 (40%), Gaps = 40/351 (11%)
Query: 64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA--- 120
YG ++G LR A+ + ++ + + V V+ GA + L L G +V +
Sbjct: 108 YGLEQGNKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISRLQLLL---GSNVTIAVQDP 164
Query: 121 --PYYFNSYMSFQMTGVTH--------ILVGPCS-SKTLHPDADWLEKTLETKPTPKLVS 169
P Y +S + TG H ++ PC + + PD L P ++
Sbjct: 165 TFPAYIDSSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPD-------LAMTPRTDVIF 217
Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE----GDHVV 225
+P NP+G + L ++ D K GS ++ D+ Y F+ DG E + +
Sbjct: 218 FCSPNNPTGYVASRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAI 277
Query: 226 NLFSFSKAYGMMGWRVGYIAYPSEV---EGFA--TQLLKVQDNIPICASIISQHLALYSL 280
+ SFSK G G R+G+ P E+ GF ++ AS I+Q L L
Sbjct: 278 EVSSFSKFAGFTGVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACL 337
Query: 281 QTGPEWVTERVKDLVR-NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW 339
+G V + + NR+I+ + L LG V GG A YLW K ++V
Sbjct: 338 SSGGLKEIRSVNNYYKENRKILMDTLVSLGL-KVYGGVNAPYLWVHF--KGSKSWDVFNE 394
Query: 340 LAHRHGVVVIPGGACGCRG--HLRISFGGLVEDDCKAAADRLRRGLEELVK 388
+ ++ +PG G G +LRIS G D A+ RL+ K
Sbjct: 395 ILENTHIITVPGSGFGPGGEEYLRISGFGR-RDHIVEASKRLQNFFNTRTK 444
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 23/240 (9%)
Query: 31 NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
+ V+L QG + PP A+E + V D +++Y G P L L + L QE
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
++ V+VT G A L D GD V++ P+ F+ Y M G + V
Sbjct: 89 DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEPF-FDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
GP + L ++W +E T T LV + P NP G L+ ++ LC+
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
+ D Y++ +YDG +H + + + + S K + GW+VG++ P +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHI 265
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 36/406 (8%)
Query: 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV------WDPS 60
+K+ALE + ++ +LV + + +SLA G+ P E +++++ +
Sbjct: 54 FSKKALEMRASEVRELLKLVETS-DIISLAGGLP--NPKTFPKEIIRDILVEIMEKYADK 110
Query: 61 ISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
+YG +G LR+ L+K L + + + + +M+T+G+ QA I + GD VV+
Sbjct: 111 ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVE 170
Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNP----G 174
AP Y + +F +I + P + + + LE+ L E K K V VV
Sbjct: 171 APTYLAALQAFNFYEPQYIQI-PLDDEGMK--VEILEEKLKELKSQGKKVKVVYTVPTFQ 227
Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG----DHVVNLFSF 230
NP+G + E K + +L +V D+ Y Y G ++ V+ L +F
Sbjct: 228 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 287
Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVT 288
SK G+R+G++ G ++ + + +C ++ Q +A + G + +
Sbjct: 288 SKILA-PGFRIGWMVGDP---GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIP 343
Query: 289 ERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346
E K R+ + EAL VK EG +++W LP+ +D +++ A + GV
Sbjct: 344 EIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLE-RAIKKGV 401
Query: 347 VVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
+PG A + +R++F + ED RL ++E +K
Sbjct: 402 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 143/336 (42%), Gaps = 38/336 (11%)
Query: 64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
YG D GLP LR L + + + + ++ GA + L+ +V + P Y
Sbjct: 71 YGPDFGLPALRQKLSEDFYR-GFVDAKEIFISDGAKVDLFRL-LSFFGPNQTVAIQDPSY 128
Query: 124 FNSYMSF-QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182
+Y+ ++TG I+ PC L +A + E +T ++ + +P NP+GT +
Sbjct: 129 -PAYLDIARLTGAKEIIALPC----LQENAFFPEFPEDTHI--DILCLCSPNNPTGTVLN 181
Query: 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYD-----------GRKHCCVEGDHVVNLFSFS 231
+ L+ I ++ D Y F+ D + C +E +N SFS
Sbjct: 182 KDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE----IN--SFS 235
Query: 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------NIPICASIISQHLALYSLQTGPE 285
K G G R+G+ P E+ +A +QD ASI +Q + L P+
Sbjct: 236 KPLGFAGIRLGWTVIPQELT-YADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQ 294
Query: 286 WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345
E + N +++R+AL G V GGE A YLW + + ++ D ++ + +
Sbjct: 295 L--EAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYH 351
Query: 346 VVVIPGGACGCRGHLRISFGGL-VEDDCKAAADRLR 380
+ + PG G G + F L +D AA +RL+
Sbjct: 352 IAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQ 387
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 180/406 (44%), Gaps = 36/406 (8%)
Query: 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV------WDPS 60
+K+ALE + ++ +LV + + +SLA G+ P E +++++ +
Sbjct: 9 FSKKALEMRASEVRELLKLVETS-DIISLAGGLP--NPKTFPKEIIRDILVEIMEKYADK 65
Query: 61 ISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119
+YG +G LR+ L+K L + + + + +M+T+G+ QA I + GD VV+
Sbjct: 66 ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVE 125
Query: 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVV----NPG 174
AP Y + +F +I + P + + + LE+ L E K K V VV
Sbjct: 126 APTYLAALQAFNFYEPQYIQI-PLDDEGMK--VEILEEKLKELKSQGKKVKVVYTVPTFQ 182
Query: 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG----DHVVNLFSF 230
NP+G + E K + +L +V D+ Y Y G ++ V+ L +F
Sbjct: 183 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 242
Query: 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVT 288
SK G+R+G++ G ++ + + +C ++ Q +A + G + +
Sbjct: 243 SKILA-PGFRIGWMVGDP---GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIP 298
Query: 289 ERVKDLVRNREIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346
E K R+ + EAL VK EG +++W LP+ +D +++ A + GV
Sbjct: 299 EIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPD-GIDSKKMLE-RAIKKGV 356
Query: 347 VVIPGGAC----GCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
+PG A + +R++F + ED RL ++E +K
Sbjct: 357 AYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 402
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 161/391 (41%), Gaps = 47/391 (12%)
Query: 1 MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--D 58
M + L KR + + V+ +L K ++L QG + PK A+ + D
Sbjct: 9 MHNKFDLPKRYQGSTKSVWVEYIQLAAQYK-PLNLGQGFPDYHAPKYALNALAAAANSPD 67
Query: 59 PSISKYGADEGLPELRDALVKKLNQE-----NKLYKSSVMVTAGANQAFVNIVLTLCDAG 113
P ++Y G P L AL K +Q N + + V+VT GA +A + D G
Sbjct: 68 PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEG 125
Query: 114 DSVVMFAPYYFNSY--MSFQMTGVTHIL-VGPCSSKTLHPDADW------LEKTLETKPT 164
D V++ P+ F+ Y M G+ + + P + ADW LE K
Sbjct: 126 DEVIIIEPF-FDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKT- 183
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCVEG 221
K++ + P NP G + L+ +++LCK V D YE+ +++ +H C + G
Sbjct: 184 -KMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 242
Query: 222 --DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-IPICASIISQHLA-- 276
+ + + S K + + GW++G+ P E L V N + CA+ I + +A
Sbjct: 243 MWERTITIGSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVG 299
Query: 277 ----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEK- 329
L L++ + +L+ R+ + L+ +G +GG + W+ L K
Sbjct: 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKV 359
Query: 330 -------HLDDFEVVRWLAHRHGVVVIPGGA 353
D+ +W+ G+ IP A
Sbjct: 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 147/353 (41%), Gaps = 34/353 (9%)
Query: 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLYKSSVMVTAGANQAF 102
P+ A+E + + + ++ Y GLP LR + + + L V++T G++ F
Sbjct: 46 PRGAVEALAKSLETDALG-YTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF 104
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLET 161
+ L D+GD V + AP Y + + G+ + + L P AD+ L
Sbjct: 105 LLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGLDLAG 164
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE- 220
+ V +P NP+GT + + + +A G+ + D Y Y+ + +E
Sbjct: 165 ------LXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL 218
Query: 221 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280
D + SFSK + GWRVG+ P E + ++ N ICA SQ AL +L
Sbjct: 219 TDECYVINSFSKYFSXTGWRVGWXVVP---EDQVRVVERIAQNXFICAPHASQVAALAAL 275
Query: 281 QTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 340
E + + NR++ E L G + +GA Y++A + + D +
Sbjct: 276 DCDAE-LQANLDVYKANRKLXLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEI 334
Query: 341 AHRHGVVVIPG-------GACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
+ GV V PG GA G LR S+ +A AD + GL+ L
Sbjct: 335 LEKAGVAVTPGLDFDPERGA----GTLRFSY-------ARATAD-IEEGLDRL 375
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 31 NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
+ V+L QG + PP A+E + V D +++Y G P L L + L QE
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
++ V+VT G A L D GD V++ P+ F+ Y M G + V
Sbjct: 89 DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEPF-FDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
GP + L ++W +E T T LV + P NP G L+ ++ LC+
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
+ D Y++ +YDG +H + + + + S + GW+VG++ P +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHI 265
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 23/240 (9%)
Query: 31 NAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALV----KKLNQEN 85
+ V+L QG + PP A+E + V D +++Y G P L L + L QE
Sbjct: 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEI 88
Query: 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILV---- 140
++ V+VT G A L D GD V++ P+ F+ Y M G + V
Sbjct: 89 DPLRN-VLVTVGGYGALFTAFQALVDEGDEVIIIEPF-FDCYEPMTMMAGGRPVFVSLKP 146
Query: 141 GPCSSKTLHPDADWLEKTLE-----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195
GP + L ++W +E T T LV + P NP G L+ ++ LC+
Sbjct: 147 GPIQNGELGSSSNWQLDPMELAGKFTSRTKALV-LNTPNNPLGKVFSREELELVASLCQQ 205
Query: 196 AGSWLVVDNTYEYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
+ D Y++ +YDG +H + + + + S + GW+VG++ P +
Sbjct: 206 HDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVLGPDHI 265
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 160/391 (40%), Gaps = 47/391 (12%)
Query: 1 MGSYAKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--D 58
M + L KR + + V+ +L K ++L QG + PK A+ + D
Sbjct: 9 MHNKFDLPKRYQGSTKSVWVEYIQLAAQYK-PLNLGQGFPDYHAPKYALNALAAAANSPD 67
Query: 59 PSISKYGADEGLPELRDALVKKLNQE-----NKLYKSSVMVTAGANQAFVNIVLTLCDAG 113
P ++Y G P L AL K +Q N + + V+VT GA +A + D G
Sbjct: 68 PLANQYTRGFGHPRLVQALSKLYSQLVDRTINPM--TEVLVTVGAYEALYATIQGHVDEG 125
Query: 114 DSVVMFAPYYFNSY--MSFQMTGVTHIL-VGPCSSKTLHPDADW------LEKTLETKPT 164
D V++ P+ F+ Y M G+ + + P + ADW LE K
Sbjct: 126 DEVIIIEPF-FDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKT- 183
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCVEG 221
K++ + P NP G + L+ +++LCK V D YE+ +++ +H C + G
Sbjct: 184 -KMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPG 242
Query: 222 --DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-IPICASIISQHLA-- 276
+ + + S + + GW++G+ P E L V N + CA+ I + +A
Sbjct: 243 MWERTITIGSAGXTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVG 299
Query: 277 ----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEK- 329
L L++ + +L+ R+ + L+ +G +GG + W+ L K
Sbjct: 300 FETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKV 359
Query: 330 -------HLDDFEVVRWLAHRHGVVVIPGGA 353
D+ +W+ G+ IP A
Sbjct: 360 DLTQETDARKDYRFTKWMTKSVGLQGIPPSA 390
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 152/353 (43%), Gaps = 28/353 (7%)
Query: 18 IMVQIQELVRGAKNAVSLAQGVVYWQ--PPKMAMEKVKELVW-DPSISKYGADEGLPELR 74
+M + EL + +SLA G + P + E KE++ +P Y G+PELR
Sbjct: 22 VMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELR 81
Query: 75 DALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
+ L L + + L S ++++T G A + L D GD V+ P Y N+ ++F+
Sbjct: 82 EELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQ 141
Query: 133 TGVTHILVGPCSSKTLHPDADWLE---KTLETKPTP-KLVSVVNPG-NPSGTYIPERLLK 187
G I P + + D LE K L+ K KL+ + G NP G + K
Sbjct: 142 LG-AKIEGVPVDNDGMR--VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRK 198
Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDG-----RKHCCVEGDHVVNLFSFSKAYGMMGWRVG 242
+ ++ ++ D Y + Y+G K EG V+ + SK G G+R+G
Sbjct: 199 ALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEG-RVIVAGTLSKVLG-TGFRIG 256
Query: 243 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNRE 299
+I E+ ++L + I CA ISQ++AL L+ G + + R+
Sbjct: 257 WIIAEGEI---LKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRD 313
Query: 300 IIREAL-SPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
I+ +AL + L +++ LPE D L R GVVV+PG
Sbjct: 314 IMLKALENHLPNAEFTKPIAGMFVMFFLPEGA-DGISFANELMEREGVVVVPG 365
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 30/309 (9%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK--KLNQENKLYKSSVMVTAGANQ 100
+ P++ E++ E P + Y G+ ELR+A K Q + +V+VT G ++
Sbjct: 56 KTPEVFFERIYE--NKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSE 113
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
A + + + GD +++ P+Y N ++ GV I P + + A + + LE
Sbjct: 114 AILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLI---PVTRRXEEGFA--IPQNLE 168
Query: 161 TKPTPKLVSVV--NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KH 216
+ + +V NP NP+G + + + ++ + G +L+VD Y ++ G
Sbjct: 169 SFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA 228
Query: 217 CCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLKVQDNIPICASIISQHL 275
+E D VV + S S + G RVG I E+ A +L + + P+ I S +
Sbjct: 229 LSIESDKVVVIDSVSXKFSACGARVGCLITRNEELISHAXKLAQGRLAPPLLEQIGS--V 286
Query: 276 ALYSLQTGPEWVTERVKDLVRN--REIIREALSPLGEGAVK---GGEGAIYLWARLPEKH 330
L +L + D VR RE + L L E +K GA Y+ A LP +
Sbjct: 287 GLLNLD-------DSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVED 339
Query: 331 LDDFEVVRW 339
++F RW
Sbjct: 340 AEEF--ARW 346
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 31/314 (9%)
Query: 92 VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD 151
V++T G+ QA + D G V++ AP Y + +F++ G + V P + PD
Sbjct: 94 VLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEG--PD 150
Query: 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFM 210
D LE+ L+ + L + + NP+G P KR+ + G +V D+ Y E +
Sbjct: 151 LDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYF 210
Query: 211 YDGRKHCCVEGDH------VVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDN 263
+ R E V+ L SFSK G RV + +A+P ++ +L++ +
Sbjct: 211 GEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEALQ----KLVQAKQG 265
Query: 264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR------EIIREALSPLGEGAVKGGE 317
+ +++Q L L+ G ERV+ + R + + RE + KGG
Sbjct: 266 ADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGG- 324
Query: 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----GCRGHLRISFGGLVEDDCK 373
+++W LP K L + R A V +PGG G LR+S+ L +
Sbjct: 325 --MFVWMELP-KGLSAEGLFRR-ALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIA 380
Query: 374 AAADRLRRGLEELV 387
RL R L+ L+
Sbjct: 381 EGVRRLGRALKGLL 394
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 43/337 (12%)
Query: 63 KYGADEGLPELRDALVKKLNQENKLYK----SSVMVTAGANQAFVNIVLTLCDAGDSVVM 118
YG EG P + ++ ++LY ++ T GA A + ++ +L + GD V+
Sbjct: 58 NYGWIEGSPAFKKSV-------SQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVIS 110
Query: 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178
P Y Y + G L PD + L + + +PT K + + N NP+G
Sbjct: 111 LYPTYQQLYDIPKSLGAEVDLWQIEEENGWLPDLEKLRQLI--RPTTKXICINNANNPTG 168
Query: 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238
L+ + ++ G++++ D Y F D + + S S Y + G
Sbjct: 169 AVXDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSXTYSLPG 228
Query: 239 WRVGYIAYPSEVEGFATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN 297
R+G++A +V T +L+ +D ICA + +A +L E L RN
Sbjct: 229 IRIGWVAANHQV----TDILRDYRDYTXICAGVFDDLVAQLALAHYQEI-------LERN 277
Query: 298 REIIREALSPLGE--------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 349
R I+ E L+ L + ++ + + +DF L HGV+++
Sbjct: 278 RHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDXPXEDF--CLQLLQEHGVLLV 335
Query: 350 PGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386
PG G++R+ F C+ + L +GLE+L
Sbjct: 336 PGNRFERDGYVRLGFA------CE--QETLIKGLEKL 364
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 21/273 (7%)
Query: 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSK 146
++ V+VT GA +A VL L + G V++ P+Y +SY H + P +
Sbjct: 86 ETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFY-DSYSPVVAMAGAHRVTVPLVPDGR 144
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
DAD L + + P + + + +P NP+G + L I+++ AA ++ D Y
Sbjct: 145 GFALDADALRRAV--TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVY 202
Query: 207 EYFMYDGRKHCCVEG-----DHVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGF--ATQLL 258
E+ ++D +H + G + + + S + + GW++G+ P+E + G A Q L
Sbjct: 203 EHLVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAAKQYL 262
Query: 259 KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318
P Q +L T WV L R+ + L+ +G AV G
Sbjct: 263 SYVGGAPF------QPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIGF-AVHDSYG 315
Query: 319 AIYLWAR-LPEKHLDDFEVVRWLAHRHGVVVIP 350
+L A P + D E L + GV IP
Sbjct: 316 TYFLCADPRPLGYDDSTEFCAALPEKVGVAAIP 348
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 144/358 (40%), Gaps = 22/358 (6%)
Query: 33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---K 89
++ A G+ P+ ++ ++ + P KYGA G + A+V ++ + +
Sbjct: 50 INXAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKE 109
Query: 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
V + G V + + + GD V++ P Y + + + P + + H
Sbjct: 110 DEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPV---PLNLEPPH 166
Query: 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209
DW + + KL+ + P NP+G+ + + K + +V D Y F
Sbjct: 167 YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF 226
Query: 210 MYDGRKHCCVEG----DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265
+D + + D + ++S SK Y G+RVG+ + L K Q +
Sbjct: 227 GFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDX---IQALKKYQTHTN 283
Query: 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
Q A+Y+L +++ E+ ++ + R EA + +G IY+W
Sbjct: 284 AGXFGALQDAAIYALNHYDDFLEEQ-SNVFKTRRDRFEAXLAKADLPFVHAKGGIYVWLE 342
Query: 326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFGGLVEDDCK--AAADRL 379
P + D + ++L ++V PG G G ++RIS L DD K AA RL
Sbjct: 343 TPPGY-DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRIS---LALDDQKLDEAAIRL 396
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 48/359 (13%)
Query: 60 SISKYGADEGLPELRDALVKKLNQEN----KLYKSSVMVTAGANQAFVNIVLTLCDAGDS 115
+I+ + GLPE R A+ K + + + V++ GA A I+ L D GD+
Sbjct: 75 AIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDA 134
Query: 116 VVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL----VS 169
++ +PYY FN + ++ TGV I + SS + +++ E + +
Sbjct: 135 FLVPSPYYPAFNRDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLI 193
Query: 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-------------- 215
+ NP NP GT + + LK + LV D Y ++D +
Sbjct: 194 LTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMT 253
Query: 216 HCCVEGDHVVNLFSFSKAYGMMGWRVGYI-AYPSEVEGFATQ-----LLKVQDNIPICAS 269
+C + H+V +S SK G+ G+RVG I ++ +V A + L+ Q + A
Sbjct: 254 YCNKDLVHIV--YSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAM 311
Query: 270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR---- 325
+ + L+ + +R K E++ G +K G ++ W
Sbjct: 312 LSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-------GIKCLKNNAG-LFCWMDLRPL 363
Query: 326 LPEKHLD-DFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRLRR 381
L E D + + R + + + V PG + C+ G R+ F + + A R+RR
Sbjct: 364 LRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRR 422
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
P A +K E ++ ++ + GLP + A+V + + NK+ + +++TAGA
Sbjct: 60 NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 118
Query: 99 NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
A + L D G++V++ PYY F+ + ++ TGV + + SS LE
Sbjct: 119 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 177
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212
+ + L V V NP NP GT + L + + G L+ D Y +
Sbjct: 178 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 237
Query: 213 G----------RKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 255
+ C E HVV +S SK G+ G+RVG I + V AT
Sbjct: 238 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 295
Query: 256 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 312
++ S +QHL L + ++ E K L + ++ + L G
Sbjct: 296 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 350
Query: 313 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 363
+ G G ++ W + +HL + E+ + + + + + PG +C C G R+
Sbjct: 351 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 407
Query: 364 FGGLVEDDCKAAADRLR 380
F L E A RL+
Sbjct: 408 FANLPERTLDLAMQRLK 424
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
P A +K E ++ ++ + GLP + A+V + + NK+ + +++TAGA
Sbjct: 62 NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 99 NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
A + L D G++V++ PYY F+ + ++ TGV + + SS LE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 179
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212
+ + L V V NP NP GT + L + + G L+ D Y +
Sbjct: 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239
Query: 213 G----------RKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 255
+ C E HVV +S SK G+ G+RVG I + V AT
Sbjct: 240 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297
Query: 256 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 312
++ S +QHL L + ++ E K L + ++ + L G
Sbjct: 298 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 352
Query: 313 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 363
+ G G ++ W + +HL + E+ + + + + + PG +C C G R+
Sbjct: 353 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 409
Query: 364 FGGLVEDDCKAAADRLR 380
F L E A RL+
Sbjct: 410 FANLPERTLDLAMQRLK 426
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 140/348 (40%), Gaps = 47/348 (13%)
Query: 61 ISKYGADEGLPELRDA----LVKKLNQENKLYKSSVMVTAGANQA---FVNIVLTLCDAG 113
+ KY GLPELR A L ++ + + ++ G+ +A FV VL G
Sbjct: 59 LEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDG 118
Query: 114 DSVVMFAPY-YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172
+ +P ++ Y + G I C + + +PD W + E KLV V +
Sbjct: 119 IKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPD--WRSISEEVWKRTKLVFVCS 176
Query: 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEG--------DH 223
P NPSG+ + K + DL G + D Y +DG K C++
Sbjct: 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK 236
Query: 224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 283
++ S S + G R G++A +E+ L + SI Q ++ +
Sbjct: 237 LLXFTSLSXRSNVPGLRSGFVAGDAEL---LKNFLLYRTYHGSAXSIPVQRASIAA---- 289
Query: 284 PEWVTERVKDLVRNREIIREALS---PLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVR 338
W E + ++ NR + +E P+ + VK + + Y+W ++P+ DD R
Sbjct: 290 --WDDE--QHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPDG--DDLAFAR 343
Query: 339 WLAHRHGVVVIPG---------GACGCRGHLRISFGGLVEDDCKAAAD 377
L + + V+PG G G G++RI+ V KAA D
Sbjct: 344 NLWQKAAIQVLPGRFLARDTEQGNPG-EGYVRIALVADVATCVKAAED 390
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
P A +K E ++ ++ + GLP + A+V + + NK+ + +++TAGA
Sbjct: 62 NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 120
Query: 99 NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
A + L D G++V++ PYY F+ + ++ TGV + + SS LE
Sbjct: 121 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 179
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212
+ + L V V NP NP GT + L + + G L+ D Y +
Sbjct: 180 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 239
Query: 213 G----------RKHCCVEGD------HVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFAT 255
+ C E HVV +S SK G+ G+RVG I + V AT
Sbjct: 240 SPSFISVMEVLKDRNCDENSEVWQRVHVV--YSLSKDLGLPGFRVGAIYSNDDMVVAAAT 297
Query: 256 QLLKVQDNIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 312
++ S +QHL L + ++ E K L + ++ + L G
Sbjct: 298 KMSSFG-----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISC 352
Query: 313 VKGGEGAIYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRIS 363
+ G G ++ W + +HL + E+ + + + + + PG +C C G R+
Sbjct: 353 LNGNAG-LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC 409
Query: 364 FGGLVEDDCKAAADRLR 380
F L E A RL+
Sbjct: 410 FANLPERTLDLAMQRLK 426
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 171/397 (43%), Gaps = 42/397 (10%)
Query: 21 QIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD------PSISKYGADEGLPE 72
+++EL++ + +SLA G+ P +E +K++ + +YG +G
Sbjct: 30 EVRELLKLVETSDVISLAGGLP--APETFPVETIKKIAVEVLEEHADKALQYGTTKGFTP 87
Query: 73 LRDALVKKLNQ--ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130
LR AL + + + + + K +M AG+ QA I + GD +V+ AP Y + +F
Sbjct: 88 LRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAF 147
Query: 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK---LVSVVNPGNPSGTYIPERLLK 187
+ I + P K + D + K + + +V NP+G + K
Sbjct: 148 KYYDPEFISI-PLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRK 206
Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDGR-----KHCCVEGDHVVNLFSFSKAYGMMGWRVG 242
++ +L +V D Y Y G KH G V+ L +FSK G+R+G
Sbjct: 207 KLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYG-RVIYLGTFSKILA-PGFRIG 264
Query: 243 YI-AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR----N 297
++ A+P + ++ + +I +C + Q +A ++ G ++ E + ++
Sbjct: 265 WVAAHPHLIR----KMEIAKQSIDLCTNTFGQAIAWKYVENG--YLDEHIPKIIEFYKPR 318
Query: 298 REIIREALSPLGEGAVK--GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 355
R+ + EAL V+ EG +++ LPE D +++ A GV +PG A
Sbjct: 319 RDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGI--DTKLMMERAVAKGVAYVPGEAFF 376
Query: 356 C----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388
+ +R++F + E+ + RL ++E +K
Sbjct: 377 VHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMK 413
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 118/308 (38%), Gaps = 43/308 (13%)
Query: 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
+K EL S YGA++G LR A+ K + V V+ GA
Sbjct: 80 KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
CD VMF P Y +S + TG + V G P+ +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214
L T ++ +P NP+G L ++ + K GS +V D+ Y +M D
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 215 KHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 267
E + + SFSK G G R+G+ P ++ +GF + N IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 268 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 321
AS ISQ AL L G E + + + N II + + LG V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 322 LWARLPEK 329
+W P +
Sbjct: 365 VWVHFPNQ 372
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 134/353 (37%), Gaps = 34/353 (9%)
Query: 22 IQELVRGAK---NAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77
++ L+RGA V + G V +P A + V + Y G +RD L
Sbjct: 28 LEALIRGAPIEGRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLL 87
Query: 78 VKKLNQENKL---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF--NSYMSFQM 132
+L + +++T G A V GD V + P YF + F
Sbjct: 88 APRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFE 147
Query: 133 TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192
+ + S+ D K ++ NP NP+G + +I+ L
Sbjct: 148 GEXVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAAL 207
Query: 193 CKAAGSWLVVDNTYEYFMYDG------RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 246
G+ ++ D Y Y G R V+ ++VV + S + G+R+G +A+
Sbjct: 208 AARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG-VAF 266
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
S + K+Q + + A+ SQ + P W +R+ R++ I E L
Sbjct: 267 GSRA--IIARXEKLQAIVSLRAAGYSQAVLRGWFDEAPGWXEDRI---ARHQAIRDELLH 321
Query: 307 PLGEGAVKGGEGAI--------YLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
L +G EG YL+ RLP+ + E V+ L + GVVV PG
Sbjct: 322 VL-----RGXEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPG 369
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 179/429 (41%), Gaps = 53/429 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA--DWLEK--- 157
+ + + GD+V++ P Y + S G I V S + PD+ D L +
Sbjct: 122 XKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 158 ---TLETKPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD- 212
K TPK L +V N NP+G + K I +L + ++ D+ Y + ++
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNS 240
Query: 213 GRKHCCVEGD---HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 269
GR + D V+ SFSK G R+G++ P + ++V P +
Sbjct: 241 GRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN 299
Query: 270 --IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIYL 322
+ISQ L + + G +RV D N++ I+ A L+ L E V ++L
Sbjct: 300 QLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMFL 356
Query: 323 WARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAAA 376
W ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 357 WIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAF 414
Query: 377 DRLRRGLEE 385
L + ++E
Sbjct: 415 QVLAQLIKE 423
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 179/429 (41%), Gaps = 53/429 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD- 212
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y + ++
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNS 240
Query: 213 GRKHCCVEGD---HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 269
GR + D V+ SFSK G R+G++ P + ++V P +
Sbjct: 241 GRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN 299
Query: 270 --IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIYL 322
+ISQ L + + G +RV D N++ I+ A L+ L E V ++L
Sbjct: 300 QLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMFL 356
Query: 323 WARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAAA 376
W ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 357 WIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAF 414
Query: 377 DRLRRGLEE 385
L + ++E
Sbjct: 415 QVLAQLIKE 423
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 118/308 (38%), Gaps = 43/308 (13%)
Query: 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
+K EL S YGA++G LR A+ K + V V+ GA
Sbjct: 80 KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
CD VMF P Y +S + TG + V G P+ +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214
L T ++ +P NP+G L ++ + K GS +V D+ Y +M D
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 215 KHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 267
E + + SFS+ G G R+G+ P ++ +GF + N IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 268 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 321
AS ISQ AL L G E + + + N II + + LG V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 322 LWARLPEK 329
+W P +
Sbjct: 365 VWVHFPNQ 372
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 150/370 (40%), Gaps = 43/370 (11%)
Query: 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ--ENKLY--KSSVMVTAGA 98
P A +K E ++ ++ + GLP + A+V + + NK+ + +++TAGA
Sbjct: 45 NPEAAAFKKNGESIF-AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGA 103
Query: 99 NQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156
A + L D G++V++ PYY F+ + ++ TGV + + SS LE
Sbjct: 104 TSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWR-TGVEIVPIHCTSSNGFQITETALE 162
Query: 157 KTLETKPTPKL----VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212
+ + L V V NP NP GT + L + + G L+ D Y +
Sbjct: 163 EAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFS 222
Query: 213 GRKHCCV---------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE-VEGFATQLLKVQD 262
V + HVV S K G+ G+RVG I + V AT++
Sbjct: 223 SPSFISVMEVLKDEVWQRVHVVYSLS-XKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG- 280
Query: 263 NIPICASIISQHL---ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319
S +QHL L + ++ E K L + ++ + L G + G G
Sbjct: 281 ----LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAG- 335
Query: 320 IYLWARLPEKHL-------DDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVED 370
++ W + +HL + E+ + + + + + PG +C C G R+ F L E
Sbjct: 336 LFCWVDM--RHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPER 393
Query: 371 DCKAAADRLR 380
A RL+
Sbjct: 394 TLDLAMQRLK 403
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 117/308 (37%), Gaps = 43/308 (13%)
Query: 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
+K EL S YGA++G LR A+ K + V V+ GA
Sbjct: 80 KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---------- 129
Query: 110 CDAGDSVVMFA------------PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADW 154
CD VMF P Y +S + TG + V G P+ +
Sbjct: 130 CDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGF 189
Query: 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214
L T ++ +P NP+G L ++ + K GS +V D+ Y +M D
Sbjct: 190 FPD-LSTVGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248
Query: 215 KHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC 267
E + + SFS G G R+G+ P ++ +GF + N IC
Sbjct: 249 PRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIIC 305
Query: 268 -----ASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 321
AS ISQ AL L G E + + + N II + + LG V GG+ A Y
Sbjct: 306 TCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPY 364
Query: 322 LWARLPEK 329
+W P +
Sbjct: 365 VWVHFPNQ 372
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 134/331 (40%), Gaps = 43/331 (12%)
Query: 33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---- 88
+ L+ G PP+ ++ + E + DP+ Y L+ + L + + Y
Sbjct: 28 IDLSIGSTDLPPPEAPLKALAEALNDPTTYGYC-------LKSCTLPFLEEAARWYEGRY 80
Query: 89 ------KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142
+ + G+ + +++L L + D +++ + SY + P
Sbjct: 81 GVGLDPRREALALIGSQEGLAHLLLALTEPED-LLLLPEVAYPSYFGAARVASLRTFLIP 139
Query: 143 CSSKTLH-----PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197
L P+ W E K++ + P NP+G + L + G
Sbjct: 140 LREDGLADLKAVPEGVWREA--------KVLLLNYPNNPTGAVADWGYFEEALGLARKHG 191
Query: 198 SWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 253
WL+ DN Y +Y+G + + VV LFS SK+Y + G+R+G+ A SE E
Sbjct: 192 LWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGF-ALGSE-EAL 249
Query: 254 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI-IREALSPLGEGA 312
A +L +V+ I + + +L+T P+ V + R R + + EAL G +
Sbjct: 250 A-RLERVKGVIDFNQYAGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALK--GVLS 305
Query: 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343
+ +YLW RLPE +DD E L R
Sbjct: 306 LLPPRATMYLWGRLPE-GVDDLEFGLRLVER 335
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA--DWLEK--- 157
+ + + GD+V++ P Y + S G I V S + PD+ D L +
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 158 ---TLETKPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
K TPK L +V N NP+G + K I +L + ++ D+ Y + ++
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
+ V+G V+ SFSK G R+G++ P + ++V P
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 376 ADRLRRGLEE 385
L + ++E
Sbjct: 414 FQVLAQLIKE 423
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y + ++
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
+ V+G V+ SFSK G R+G++ P + ++V P
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 376 ADRLRRGLEE 385
L + ++E
Sbjct: 414 FQVLAQLIKE 423
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 179/430 (41%), Gaps = 55/430 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPEL----RDALVKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL + +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y + ++
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
+ V+G V+ SFSK G R+G++ P + ++V P
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 376 ADRLRRGLEE 385
L + ++E
Sbjct: 414 FQVLAQLIKE 423
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 154/383 (40%), Gaps = 85/383 (22%)
Query: 43 QPPKMAMEKVKELVWDPSISK---------------YGADEGLPELRDALVKKLNQENKL 87
P + E++K L SIS+ Y +G+ LRDA+ + +
Sbjct: 94 HPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGF 153
Query: 88 YKSS--VMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
++ + +T GA+ V++++ L + D +++ P Y S + G G
Sbjct: 154 PANADDIFLTDGASPG-VHLMMQLLIRNEKDGILVPIPQYPLYSASIALHG------GAL 206
Query: 144 SSKTLHPDADW------LEKTLETKPTP----KLVSVVNPGNPSGTYIPERLLKRISDLC 193
L+ W ++K LE + + + V+NPGNP+G + E I C
Sbjct: 207 VPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFC 266
Query: 194 KAAGSWLVVDNTYEYFMY-DGRKHCCVE--------GDHVVNLFSFSKA----YGMMGWR 240
K G L+ D Y+ +Y D +K + G+ + L S+ YG G R
Sbjct: 267 KNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKR 326
Query: 241 VGYIAYPSEVEGFAT----QLLKVQDNIPICASIISQHLALYSLQTGPEWVTER------ 290
GY E+ GF+ Q+ K+ ++ +C++I Q LA SL P ++
Sbjct: 327 GGYF----EITGFSAPVREQIYKIA-SVNLCSNITGQILA--SLVMNPPKASDESYASYK 379
Query: 291 ------VKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR--LPEKHL----------D 332
+ L R + + A + L EGA+Y++ + LP+K + D
Sbjct: 380 AEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPD 439
Query: 333 DFEVVRWLAHRHGVVVIPGGACG 355
F +R L G+VV+PG G
Sbjct: 440 AFYALRLL-ESTGIVVVPGSGFG 461
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 178/430 (41%), Gaps = 55/430 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 4 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 63
Query: 56 VWDPSISK----YGADEGLPELRDAL----VKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL L +K N Y S + VT+G+ Q
Sbjct: 64 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 123
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 124 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 182
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y + ++
Sbjct: 183 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 242
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
+ V+G V+ SFS G R+G++ P + ++V P
Sbjct: 243 FRVPTFLSMDVDG-RVIRADSFSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 300
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 301 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 357
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 358 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 415
Query: 376 ADRLRRGLEE 385
L + ++E
Sbjct: 416 FQVLAQLIKE 425
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 178/430 (41%), Gaps = 55/430 (12%)
Query: 3 SYAKL--AKRALETEMPIMVQIQELVRGAKNAVSLAQGV-----VYWQPPKMAMEKVKEL 55
+YA+ A A PI L RG K+ +SLA G+ ++ + +E K +
Sbjct: 2 NYARFITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTI 61
Query: 56 VWDPSISK----YGADEGLPELRDAL----VKKLNQENKLYKSS-----VMVTAGANQAF 102
+ + K Y G+PEL L +K N Y S + VT+G+ Q
Sbjct: 62 QFGEEMMKRALQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGL 121
Query: 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD------ADWLE 156
+ + + GD+V++ P Y + S G I V S + PD + W
Sbjct: 122 CKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIV-PDSLRDILSRWKP 180
Query: 157 KTLET--KPTPK-LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213
+ + K TPK L +V N NP+G + K I +L + ++ D+ Y + ++
Sbjct: 181 EDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNK 240
Query: 214 RK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268
+ V+G V+ SFS G R+G++ P + ++V P
Sbjct: 241 FRVPTFLSMDVDG-RVIRADSFSXIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTF 298
Query: 269 S--IISQHLALYSLQTGPEWVTERVKDLVRNRE--IIREA---LSPLGEGAVKGGEGAIY 321
+ +ISQ L + + G +RV D N++ I+ A L+ L E V ++
Sbjct: 299 NQLMISQLLHEWG-EEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA--AGMF 355
Query: 322 LWARLPEKHLDDF-EVVRWLAHRHGVVVIPGGA-----CGCRGHLRISFGGLVEDDCKAA 375
LW ++ K ++D E++ A + GV+++PG A +LR SF + A
Sbjct: 356 LWIKV--KGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVA 413
Query: 376 ADRLRRGLEE 385
L + ++E
Sbjct: 414 FQVLAQLIKE 423
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 132/340 (38%), Gaps = 50/340 (14%)
Query: 62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA- 120
S YGA++G LR+A+ + ++ G+ CD +MF
Sbjct: 105 SGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSK----------CDIARIQMMFGS 154
Query: 121 -----------PYYFNSYMSFQMTGVTHILVGPCSSKTL--HPDADWLEKTLETKPTPKL 167
P Y ++ + MTG H G + + +PD + + K T +
Sbjct: 155 KPTVAVQDPSYPVYVDTSVMMGMTG-DHNGTGFDGIEYMVCNPDNHFFPDLSKAKRT-DI 212
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC------CVEG 221
+ +P NP+G L + + + GS LV D Y +Y C
Sbjct: 213 IFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYA--LYISNPDCPKTIYEIPGA 270
Query: 222 DHV-VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--IPIC---ASIISQHL 275
D V + SFSK G G R+G+ P ++ + + N + C AS I Q
Sbjct: 271 DEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAG 330
Query: 276 ALYSLQTGPEWVTE---RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 332
L LQ PE + E +K N +I++ + +G +V GG+ A Y+W P K
Sbjct: 331 GLACLQ--PEGLKEMNAMIKFYKENAQILKTTFTEMGF-SVYGGDDAPYIWVGFPGK--P 385
Query: 333 DFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVED 370
++V + R +V PG G G +R S G E+
Sbjct: 386 SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFGSREN 425
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 116/301 (38%), Gaps = 29/301 (9%)
Query: 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109
+K EL S YGA++G LR A+ K + V V+ GA +I
Sbjct: 80 KKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAK---CDISRLQ 136
Query: 110 CDAGDSVVMFA-----PYYFNSYMSFQMTGVTHILV---GPCSSKTLHPDADWLEKTLET 161
G +V + P Y +S + TG + V G P+ + L T
Sbjct: 137 VXFGSNVTIAVQDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPD-LST 195
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE- 220
++ +P NP+G L ++ + K GS +V D+ Y + D E
Sbjct: 196 VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEI 255
Query: 221 ---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGFATQLLKVQDNIPIC-----AS 269
+ SFSK G G R+G+ P ++ +GF + N IC AS
Sbjct: 256 PGAEEVAXETASFSKYAGFTGVRLGWTVIPKKLLYSDGFP---VAKDFNRIICTCFNGAS 312
Query: 270 IISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 328
ISQ AL L G E + + N II + + LG V GG+ A Y+W P
Sbjct: 313 NISQAGALACLTPEGLEAXHKVIGFYKENTNIIIDTFTSLGYD-VYGGKNAPYVWVHFPN 371
Query: 329 K 329
+
Sbjct: 372 Q 372
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 148/355 (41%), Gaps = 33/355 (9%)
Query: 22 IQELVRGA--KNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPS--ISKYGADEGLPELRD 75
I+E+++ A K+A+S GV + P K E KE++ +Y EG P L+
Sbjct: 33 IREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQ 92
Query: 76 ALVKKLNQE---NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM 132
++K L + L + +++ T G+ QA I D V+ P Y + +F+
Sbjct: 93 QILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQ 152
Query: 133 TGVTHILVGPCSS-----KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187
+ + +V P L +K + K + V N NP+G K
Sbjct: 153 Y-LANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRK 211
Query: 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG----DHVVNLFSFSKAYGMMGWRVGY 243
+ ++ + ++V D+ Y Y+G + + VV L +FSK G R+G
Sbjct: 212 ALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGX 270
Query: 244 IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREII 301
+A E F ++++ + + +C+ I+ LA L+ E + ++ R R +
Sbjct: 271 VAGSKE---FIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVX 327
Query: 302 REALSPL-----GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351
AL G VK EG +++W LPE D +E + A R V +PG
Sbjct: 328 LNALEEYFSDIPGVKWVK-SEGGLFIWLTLPE-GFDTWEXFEY-AKRKKVFYVPG 379
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
L K++V V GA++ I+ + D V F P Y + Y F L P +
Sbjct: 74 LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
P+ + E +V + NP NP+G ++RI G+++ +D Y
Sbjct: 129 LRIPEVNVGEG--------DVVFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 176
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
F + + +++ + +FSKA+ + RVGY+ E F +V+ +P
Sbjct: 177 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 231
Query: 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
S +SQ A +L E ER K +V RE ++ AL +G
Sbjct: 232 NVSYVSQMFAKVALDHR-EIFEERTKFIVEERERMKSALREMG 273
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 23/223 (10%)
Query: 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
L K++V V GA++ I+ + D V F P Y + Y F L P +
Sbjct: 86 LSKNNVSVGNGADE----IIYVMMLMFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 140
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
P+ + E + V + NP NP+G ++RI G+++ +D Y
Sbjct: 141 LRIPEVNVGEGDV--------VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 188
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
F + + +++ + +FSKA+ + RVGY+ E F +V+ +P
Sbjct: 189 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 243
Query: 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
S +SQ A +L E ER K +V RE ++ AL +G
Sbjct: 244 NVSYVSQMFAKVALDHR-EIFEERTKFIVEERERMKSALREMG 285
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
L K++V V GA++ I+ D V F P Y + Y F L P +
Sbjct: 74 LSKNNVSVGNGADE----IIYVXXLXFDRSVFFPPTY-SCYRIFAKAVGAKFLEVPLTKD 128
Query: 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
P+ + E + V + NP NP+G ++RI G+++ +D Y
Sbjct: 129 LRIPEVNVGEGDV--------VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY 176
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266
F + + +++ + +FSKA+ + RVGY+ E F +V+ +P
Sbjct: 177 YEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV---ASEKFIDAYNRVR--LPF 231
Query: 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309
S +SQ A +L E ER K +V RE + AL G
Sbjct: 232 NVSYVSQXFAKVALDHR-EIFEERTKFIVEERERXKSALREXG 273
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 29/319 (9%)
Query: 72 ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
ELRD L + ++ + + ++ G+N+ ++ G + + F P Y S
Sbjct: 70 ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 127
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
G + D D + + K P +V V P NP+G L +
Sbjct: 128 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 183
Query: 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGY-IAY 246
+ A ++VD Y F +E +V + SKA+ G R+GY +A
Sbjct: 184 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 243
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
P+ ++ A L++ +P S +SQ A+ +L+ + + V+ L R + L
Sbjct: 244 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 296
Query: 307 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366
LG AV E + ++H W A V+I G GHLR + G
Sbjct: 297 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 347
Query: 367 LVEDDC--KAAADRLRRGL 383
E+D AAA+ ++ L
Sbjct: 348 PEENDAFLDAAAEIIKLNL 366
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 125/319 (39%), Gaps = 29/319 (9%)
Query: 72 ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
ELRD L + ++ + + ++ G+N+ ++ G + + F P Y S
Sbjct: 73 ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 130
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
G + D D + + K P +V V P NP+G L +
Sbjct: 131 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 186
Query: 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGY-IAY 246
+ A ++VD Y F +E +V + SKA+ G R+GY +A
Sbjct: 187 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN 246
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
P+ ++ A L++ +P S +SQ A+ +L+ + + V+ L R + L
Sbjct: 247 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 299
Query: 307 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366
LG AV E + ++H W A V+I G GHLR + G
Sbjct: 300 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 350
Query: 367 LVEDDC--KAAADRLRRGL 383
E+D AAA+ ++ L
Sbjct: 351 PEENDAFLDAAAEIIKLNL 369
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 50/249 (20%)
Query: 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87
G K + LA + P A+E +++ + + + D+ EL+ L +K +N+
Sbjct: 28 GVKEVIKLASNENPFGTPPKAIECLRQ---NANKAHLYPDDSXIELKSTLAQKYKVQNE- 83
Query: 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY-FNSYMSFQMTGVT----HILVGP 142
++++ AG++Q V+ FA + NS +F GVT I
Sbjct: 84 ---NIIIGAGSDQ---------------VIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQ 125
Query: 143 CSSK-----TLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYI----PERLLKRISDL 192
C +K ++ + D +K ET K KL+ + P NP G + +K +++
Sbjct: 126 CGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGVNED 185
Query: 193 CKAAGSWLVVDNTYEYF--MYDGRKH---CCV--EGDHVVNLFSFSKAYGMMGWRVGY-I 244
C +V+D Y F D +KH C + E D+V+ L +FS YG+ G R+GY I
Sbjct: 186 C-----LVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGI 240
Query: 245 AYPSEVEGF 253
A + + F
Sbjct: 241 ANANIISAF 249
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 102/238 (42%), Gaps = 24/238 (10%)
Query: 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTG 134
A+++ Q + V+V+ GA++ ++ C+ G +++ P + Y +S + G
Sbjct: 62 AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIG 121
Query: 135 VTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
V +T+ +W L+ + K+V V +P NP+G I + + + +
Sbjct: 122 V--------ECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLE 173
Query: 192 LCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
L + + +V D Y E+ E H+ L + SKA+ + G R G+ EV
Sbjct: 174 LTRGK-AIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232
Query: 251 EGFATQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
L+KV P+ A I +Q L+ G + ERV ++ RE + AL
Sbjct: 233 INL---LMKVIAPYPLSTPVADIAAQALS----PQGIVAMRERVAQIIAEREYLIAAL 283
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
+PD++ L+K P K+ VNP NP + +R L+R+ ++ L++ D+ Y
Sbjct: 233 YPDSE-LDKL--KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245
F D + + ++ + ++SFSK +G GWR+G +A
Sbjct: 290 GTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVA 328
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
+PD++ L+K P K+ VNP NP + +R L+R+ ++ L++ D+ Y
Sbjct: 233 YPDSE-LDKL--KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245
F D + + ++ + ++SFSK +G GWR+G +A
Sbjct: 290 GTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVA 328
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM 210
D + L+ + P +V +VNP NP+GT P +++ K A + +VD Y F+
Sbjct: 128 DIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWI-ASKPANTXFIVDEAYAEFV 186
Query: 211 YDGRKHCCVE-----GDHVVNLFSFSKAYGMMGWRVGY-IAYPS 248
D R ++++ L +FSK + G RVGY +A+P+
Sbjct: 187 NDPRFRSISPXITQGAENIILLKTFSKIHAXAGXRVGYAVAHPT 230
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTG 134
A+++ Q + V+V+ GA++ ++ C+ G +++ P + Y +S + G
Sbjct: 62 AVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIG 121
Query: 135 VTHILVGPCSSKTLHPDADW---LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191
V +T+ +W L+ + K+V V +P NP+G I + + + +
Sbjct: 122 V--------ECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLE 173
Query: 192 LCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250
L + + +V D Y E+ E H+ L + SKA+ + G R G+ EV
Sbjct: 174 LTRGK-AIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEV 232
Query: 251 EGFATQLLKVQDNIPIC---ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305
L KV P+ A I +Q L+ G ERV ++ RE + AL
Sbjct: 233 INL---LXKVIAPYPLSTPVADIAAQALS----PQGIVAXRERVAQIIAEREYLIAAL 283
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 29/319 (9%)
Query: 72 ELRDALVKKLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS 129
ELRD L + ++ + + ++ G+N+ ++ G + + F P Y S
Sbjct: 73 ELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSY--SMHP 130
Query: 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
G + D D + + K P +V V P NP+G L +
Sbjct: 131 ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAK-QPDIVFVTTPNNPTGDVTS---LDDV 186
Query: 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMGWRVGY-IAY 246
+ A ++VD Y F +E +V + S A+ G R+GY +A
Sbjct: 187 ERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVAN 246
Query: 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306
P+ ++ A L++ +P S +SQ A+ +L+ + + V+ L R + L
Sbjct: 247 PAFID--AVMLVR----LPYHLSALSQAAAIVALRHSADTLGT-VEKLSVERVRVAARLE 299
Query: 307 PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366
LG AV E + ++H W A V+I G GHLR + G
Sbjct: 300 ELGY-AVVPSESNFVFFGDFSDQH------AAWQAFLDRGVLIRD--VGIAGHLRTTIGV 350
Query: 367 LVEDDC--KAAADRLRRGL 383
E+D AAA+ ++ L
Sbjct: 351 PEENDAFLDAAAEIIKLNL 369
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 134/348 (38%), Gaps = 33/348 (9%)
Query: 49 MEKVKELVWDPSISKYGADEGLPELRDA--------LVKKLNQENKLYKSSVMVTAGANQ 100
++K+KE + + Y G PE R+A V K ++ + K +V++ +G +
Sbjct: 56 IKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSH 115
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160
+ + +CDAGD ++ P + + + G+ D D + + +
Sbjct: 116 GILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD 175
Query: 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE 220
K KL+ V NP NP G+ + ++ I L + L D Y ++ G+
Sbjct: 176 DK--TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATF 233
Query: 221 GDHV--------VNLFSFSKAYGMMGWRVGYIAY-------PSEVEGFATQLLKVQDNIP 265
V L + + GWR+G++ Y PS +EG + V
Sbjct: 234 TSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCT 293
Query: 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325
+ + + + L L T E + + V + + + + A GA+YL +R
Sbjct: 294 VVQAALGEAL----LNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSR 349
Query: 326 LP-EKHLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE 369
+ EK+ D D E L V V+PG G R++ VE
Sbjct: 350 IDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRPVE 397
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 10/260 (3%)
Query: 84 ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
E L V++T+G +QA + L + G ++++ P + + G+ L
Sbjct: 90 EAPLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLL 149
Query: 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203
K+ D LE ++ K T LV V NP NP G+ +R L++I + + ++ D
Sbjct: 150 PEKSWEIDLKQLESLIDEK-TACLV-VNNPSNPCGSVFSKRHLQKILAVAERQCVPILAD 207
Query: 204 NTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ--- 256
Y ++ K+ +++ + + + GWR+G+I + F +
Sbjct: 208 EIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRD 267
Query: 257 -LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315
L+K+ I +I+ L +T E+ + + L N ++ ALS +
Sbjct: 268 GLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPGLQPVR 327
Query: 316 GEGAIYLWARLPEKHLDDFE 335
GA+YL + +H +FE
Sbjct: 328 PSGAMYLMVGIEMEHFPEFE 347
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 10/143 (6%)
Query: 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164
L AGD V + P F Y+ + P + PD W E P
Sbjct: 189 LLKAGDKVAIGMPV-FTPYIEIPELAQYDLKEVPIHAD---PDNGWQYSDAELDKLKDPD 244
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTYEYFMYDGRKHCCVEGD 222
K+ VNP NP + +R L R+ + L++ D+ Y F + + V
Sbjct: 245 VKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYGTFADEFQSLFSVCPR 304
Query: 223 HVVNLFSFSKAYGMMGWRVGYIA 245
+ + ++SFSK +G GWR+G IA
Sbjct: 305 NTLLVYSFSKYFGATGWRLGVIA 327
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 109/260 (41%), Gaps = 10/260 (3%)
Query: 84 ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC 143
E L V++T+G +QA + L + G ++++ P + + G+ L
Sbjct: 113 EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLL 172
Query: 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203
K+ D LE ++ K +V+ NP NP G+ +R L++I + ++ D
Sbjct: 173 PEKSWEIDLKQLEYLIDEKTACLIVN--NPSNPCGSVFSKRHLQKILAVAARQCVPILAD 230
Query: 204 NTYEYFMYDGRKH---CCVEGD-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ--- 256
Y ++ K+ + D +++ +K + + GWR+G+I + F +
Sbjct: 231 EIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRD 290
Query: 257 -LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315
L+K+ I +I+ L +T E+ + L N ++ AL+ +
Sbjct: 291 GLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVR 350
Query: 316 GEGAIYLWARLPEKHLDDFE 335
GA+YL + +H +FE
Sbjct: 351 PSGAMYLMVGIEMEHFPEFE 370
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 107/282 (37%), Gaps = 19/282 (6%)
Query: 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG---PCSS 145
K ++ G A + + GD+V++ +P Y+ + ++ H LV +
Sbjct: 119 KEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLND--HRLVENSLQIIN 176
Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205
D + LEK + K+ + +P NP G L +I++LCK G LV D
Sbjct: 177 GRFEIDFEQLEKDI-IDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEI 235
Query: 206 YEYFMYDGRKHCCVEG------DHVVNLFSFSKAYGMMGWRVGY--IAYPSEVEGFA-TQ 256
++ G H + D + L S +K + + G + + I S F Q
Sbjct: 236 HQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQ 295
Query: 257 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 316
L Q +P I +Q + Q G W+ E + N +++ + L + V
Sbjct: 296 LANNQHEVPTVGMIATQA----AFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEP 351
Query: 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG 358
EG +W + ++ L + VV+ G G G
Sbjct: 352 EGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEG 393
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV--DNTY 206
+PD++ L+K + P K+ VNP NP + ER L+R+ + L++ D+ Y
Sbjct: 233 YPDSE-LDKLKD--PAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTDDVY 289
Query: 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245
F + + + + ++SFSK +G GWR+G +A
Sbjct: 290 GTFADGFQSLFAICPANTLLVYSFSKYFGATGWRLGVVA 328
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 83/206 (40%), Gaps = 22/206 (10%)
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVVN 226
V + NP NP+G + L D + L++D TY +Y + R G++ +
Sbjct: 139 VVLANPSNPTGQALSAGEL----DQLRQRAGKLLIDETYVDYSSF--RARGLAYGENELV 192
Query: 227 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQTGPE 285
SFSK+YG+ G R+G + PSE+ + + C + H +L
Sbjct: 193 FRSFSKSYGLAGLRLGALFGPSEL------IAAXKRKQWFCNVGTLDLHALEAALDNDRA 246
Query: 286 WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345
K L + R + +AL LG + + E+ L R+L R G
Sbjct: 247 REAHIAKTLAQRRRVA-DALRGLGYRVASSEANFVLVENAAGERTL------RFLRER-G 298
Query: 346 VVVIPGGACGCRGHLRISFGGLVEDD 371
+ V G G H+RIS G ++D
Sbjct: 299 IQVKDAGQFGLHHHIRISIGREEDND 324
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 20/214 (9%)
Query: 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---- 221
KL + NP NP G + LK++ D+C ++ D + + KH +
Sbjct: 166 KLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKE 225
Query: 222 --DHVVNLFSFSKAYGMMGWRVGYIAYPSE-----VEGFATQLLKVQDNIPICASIISQH 274
+ + + +K + + G + Y+ P E ++ T++ ++N C S+++
Sbjct: 226 FEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNN---CFSLVATE 282
Query: 275 LALYSLQTGPEWVTERVKDLVRNREI-IREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333
S G W+ ++ L N + I+ + + V+ EG LW L D
Sbjct: 283 A---SYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSD 339
Query: 334 FEVVRWLAHRHGVVVIPGGACGC--RGHLRISFG 365
E+ L + V + G + G G+ RI+
Sbjct: 340 EELESILVQKGKVALNQGNSFGIGGSGYQRINLA 373
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 29/207 (14%)
Query: 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS 145
+L + ++ TAG ++ + L D + V P + + + G + P
Sbjct: 81 QLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNALIEGA-EVREIPLLQ 139
Query: 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP----ERLLKRI-SDLCKAAGSWL 200
H D + ++ K T +V + NP NP+G YI + L R+ SD+ +
Sbjct: 140 DGEH-DLEGXLNAIDEKTT--IVWICNPNNPTGNYIELADIQAFLDRVPSDVL------V 190
Query: 201 VVDNTY-EYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257
V+D Y EY KH +++ +FSK YG+ RVGY G A +
Sbjct: 191 VLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGY--------GIADKE 242
Query: 258 LKVQDNI---PICASIISQHLALYSLQ 281
+ Q NI P + I Q LA+ +++
Sbjct: 243 IIRQLNIVRPPFNTTSIGQKLAIEAIK 269
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 164 TPKL--VSVVNPGNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTYEYFM--YDGRKHCC 218
TP L + + P NP+G +PER LL+ I+D CK+ L++D + F+ G
Sbjct: 144 TPDLDCLFLCTPNNPTG-LLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL 202
Query: 219 VEGDHVVNLFSFSKAYGMMGWRVGYI 244
+ H+ L S +K Y + G R+GY+
Sbjct: 203 KDNPHIWVLRSLTKFYAIPGLRLGYL 228
>pdb|3MKJ|A Chain A, Methionine Gamma-Lyase From Citrobacter Freundii With
Pyridoximine-5'- Phosphate
Length = 398
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 20/137 (14%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
DAL KKL + + + TA A +LTLC GD +V + Y G
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIY----------G 114
Query: 135 VTHILVGPCSSK-----TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
TH + K + A E +P K+V + P NP+ + + ++ +
Sbjct: 115 XTHAFLSHSMPKFGINVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETV 171
Query: 190 SDLCKAAGSWLVVDNTY 206
+ + G+ LVVDNT+
Sbjct: 172 AGIAHQQGALLVVDNTF 188
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 97/253 (38%), Gaps = 59/253 (23%)
Query: 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCC---- 218
PK++ ++NPGNP+G + ++ + +L+ D Y+ +Y D R H
Sbjct: 236 PKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVL 295
Query: 219 ----VEGDHVVNLFSF---SKAY-GMMGWRVGY---IAYPSEVEGFATQLLKVQDNIPIC 267
E V L SF SK Y G G+R GY I E++G +LL V+ +C
Sbjct: 296 YEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVR----LC 351
Query: 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG----------- 316
+ Q A + P E + + RE S LG A K
Sbjct: 352 PPVSGQ--AAMDIVVNPPVAGEESFE-----QFSREKESVLGNLAKKAKLTEDLFNQVPG 404
Query: 317 ------EGAIYLWAR--LPEKHLD---------DFEVVRWLAHRHGVVVIPGGACGCRG- 358
+GA+Y + R +P K ++ D L G+ V+PG G R
Sbjct: 405 IHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREG 464
Query: 359 --HLRISFGGLVE 369
H R++ VE
Sbjct: 465 TYHFRMTILPPVE 477
>pdb|3JW9|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With S-Ethyl-Cysteine
Length = 398
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 20/137 (14%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
DAL KKL + + + TA A +LTLC GD +V + Y G
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIY----------G 114
Query: 135 VTHILVGPCSSK-----TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
TH + K + A E +P K+V + P NP+ + + ++ +
Sbjct: 115 CTHAFLSHSMPKFGINVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETV 171
Query: 190 SDLCKAAGSWLVVDNTY 206
+ + G+ LVVDNT+
Sbjct: 172 AGIAHQQGALLVVDNTF 188
>pdb|3JWA|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With Methionine Phosphinate
pdb|3JWB|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii With Norleucine
Length = 398
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 20/137 (14%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
DAL KKL + + + TA A +LTLC GD +V + Y G
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIY----------G 114
Query: 135 VTHILVGPCSSK-----TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189
TH + K + A E +P K+V + P NP+ + + ++ +
Sbjct: 115 CTHAFLSHSMPKFGINVSFVDAAKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETV 171
Query: 190 SDLCKAAGSWLVVDNTY 206
+ + G+ LVVDNT+
Sbjct: 172 AGIAHQQGALLVVDNTF 188
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 121/329 (36%), Gaps = 29/329 (8%)
Query: 64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123
Y +DE L + D +K + K ++ G A + G++V++ +P Y
Sbjct: 66 YASDELLQAVLDW--EKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVY 123
Query: 124 FNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182
S ++ + L D + LE + + KL + NP NP G
Sbjct: 124 PPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDI-VENDVKLYLLCNPHNPGGRVWE 182
Query: 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG------DHVVNLFSFSKAYGM 236
+L++I LC+ LV D ++ G +H D + L S +K + +
Sbjct: 183 REVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNI 242
Query: 237 MGWRVGY--IAYPSEVEGFA-TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKD 293
G + Y I P+ F QL+ + I ++ Y G W+
Sbjct: 243 AGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRY----GKPWLVALKAV 298
Query: 294 LVRNREIIREALSPLGEGA----VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 349
L N I+ A+ + A V +G +W + L D + L + V++
Sbjct: 299 LEEN---IQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILN 355
Query: 350 PGGACGCRG--HLRISFGG---LVEDDCK 373
G G G H R++ LVE+ CK
Sbjct: 356 RGSDYGSEGELHARLNIAAPKSLVEEICK 384
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 113/278 (40%), Gaps = 28/278 (10%)
Query: 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG-PCSSKTLHPDADWLEKTLETKP 163
++ + G+ VV+ P Y Y + + T + V + D LE L KP
Sbjct: 103 LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVL-AKP 161
Query: 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC------ 217
K++ + +P NP+G L+ ++DLC+ G ++ D + ++ + H
Sbjct: 162 ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA 221
Query: 218 ------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASI- 270
G N+ + + AYG++ AY S ++G +D + + +
Sbjct: 222 RGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKG--------RDGLSSPSVLA 273
Query: 271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL-SPLGEGAVKGGEGAIYLWARLPEK 329
++ H+A Y Q G W+ L N I + + + E + + W L
Sbjct: 274 LTAHIAAY--QQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPL 331
Query: 330 HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFG 365
++DD + + L + V ++PG G RG +R++ G
Sbjct: 332 NIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG 369
>pdb|2RFV|A Chain A, High Resolution Structure Of L-Methionine Gamma-Lyase From
Citrobacter Freundii
Length = 398
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQM 132
DAL KKL + + + TA A +LTLC GD +V + Y ++++S M
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSM 124
Query: 133 T--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190
G+ V + E +P K+V + P NP+ + + ++ ++
Sbjct: 125 PKFGINVRFVDAAKPE---------EIRAAMRPETKVVYIETPANPTLSLVD---IETVA 172
Query: 191 DLCKAAGSWLVVDNTY 206
+ G+ LVVDNT+
Sbjct: 173 GIAHQQGALLVVDNTF 188
>pdb|1Y4I|A Chain A, Crystal Structure Of Citrobacter Freundii
L-Methionine-Lyase
Length = 398
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTG 134
DAL KKL + + + TA A +LTLC GD +V + Y G
Sbjct: 67 DALEKKLAVLER--GEAGLATASGISAITTTLLTLCQQGDHIVSASAIY----------G 114
Query: 135 VTHILVGPCSSK----TLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRI 189
TH + K DA E+ +P K+V + P NP+ + + ++ +
Sbjct: 115 CTHAFLSHSMPKFGINVRFVDAGKPEEIRAAMRPETKVVYIETPANPTLSLVD---IETV 171
Query: 190 SDLCKAAGSWLVVDNTY 206
+ + G+ LVVDNT+
Sbjct: 172 AGIAHQQGALLVVDNTF 188
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 28/102 (27%)
Query: 170 VVNPGNPSGTYIPERLLKR---ISDLCKAAGSWLVVDNTYEYFMYD---------GRKHC 217
+ NP NP G RLL+R + L + V+D +Y F + GRK+
Sbjct: 135 LCNPNNPDG-----RLLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKN- 188
Query: 218 CVEGDHVVNLFSFSKAYGMMGWRVGYIA----YPSEVEGFAT 255
+V ++SFS AYG+ G R+GYI + V F+T
Sbjct: 189 ------LVXVYSFSHAYGIPGLRIGYIVANKDFXKRVAAFST 224
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 16/175 (9%)
Query: 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149
S ++ G+++ N++ G+ + P Y SY T V +T
Sbjct: 83 SWIIXANGSDEVLNNLIRAFAAEGEEIGYVHPSY--SYYG------TLAEVQGARVRTFG 134
Query: 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209
D+ + K+ + P P G P L+ I +L + LV+D TY F
Sbjct: 135 LTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFP---LEYIDELARRCAGXLVLDETYAEF 191
Query: 210 MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDN 263
++VV + SK+Y + G R+G IA P + L K++D+
Sbjct: 192 AESNALELVRRHENVVVTRTLSKSYSLAGXRIGLAIARPEVI----AALDKIRDH 242
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV-DNTYEYFMYDGRKHCCVEG 221
P+ K + VVNP NP+ L I + ++ D Y F+ + + V
Sbjct: 243 PSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLXIISDEVYGAFVPNFKSIYSVVP 302
Query: 222 DHVVNLFSFSKAYGMMGWRVGYIA 245
+ ++S+S +G GWR+G IA
Sbjct: 303 YNTXLVYSYSXLFGCTGWRLGVIA 326
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 107/295 (36%), Gaps = 25/295 (8%)
Query: 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146
+ K ++ +AG A + +SV++ P Y + T + V P +
Sbjct: 80 IQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIY-PPFFEXVTTNNRQLCVSPLQKQ 138
Query: 147 --TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204
T D + LEK + KL + +P NP G + L ++ LC +V D
Sbjct: 139 NDTYAIDFEHLEKQFQQGV--KLXLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADE 196
Query: 205 TYEYFMYDGRKHCCVE------GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 258
+ +Y H + + S + + G + I P+ E
Sbjct: 197 IHSDIIYADHTHTPFASLSEELAARTITCXAPSXTFNIAGLQASIIIIPN--EKLRQAFT 254
Query: 259 KVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNR-----EIIREALSPLGEGA 312
+Q I + A S T +W+ E ++ + + E I++ + L +
Sbjct: 255 SIQYRQGFHGLNIFAYTAXQSAYTECNDWLNE-IRFYIEDNAKFACEYIKDHIPTL---S 310
Query: 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRG--HLRISFG 365
V EG+ LW +L E + L + ++V PG G G H+ I+ G
Sbjct: 311 VXKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG 365
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 88/240 (36%), Gaps = 38/240 (15%)
Query: 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE----- 84
KN SL ++Y Q P++ E V V D + PEL + L K L++
Sbjct: 12 KNLGSLKWDLMYSQNPEVGNEVVPLSVADMEF------KNPPELIEGLKKYLDETVLGYT 65
Query: 85 --NKLYKSSV-----------------MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125
+ YK +V + TAG A N V GD V++ P Y+
Sbjct: 66 GPTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYP 125
Query: 126 SYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184
+M+ + I + D LEK + K L+ +P NP G +
Sbjct: 126 FFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALL-FCSPHNPVGRVWKKD 184
Query: 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE------GDHVVNLFSFSKAYGMMG 238
L++I D+ + L D + + G +H + D + + SK + + G
Sbjct: 185 ELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG 244
>pdb|3BWN|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWN|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWN|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWN|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWN|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 85/222 (38%), Gaps = 31/222 (13%)
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG 221
K P + V +P NP GT I E ++ R D + ++ D Y + Y
Sbjct: 155 KKGPYIELVTSPNNPDGT-IRETVVNRPDD----DEAKVIHDFAYYWPHYTP---ITRRQ 206
Query: 222 DHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280
DH + LF+FSK G G R+G+ + EV + + V S + L L
Sbjct: 207 DHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVL 266
Query: 281 QTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-------KHLDD 333
+ + +E RE+++ L E VK E + + PE K L+
Sbjct: 267 KETCKSESESENFFKYGREMMKNRWEKLRE-VVK--ESDAFTLPKYPEAFCNYFGKSLES 323
Query: 334 FEVVRWLA-----------HRHGVVVIPGGACGC-RGHLRIS 363
+ WL RH V+ G CG + H+R+S
Sbjct: 324 YPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVS 365
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Query: 93 MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA 152
+ +G A V GD +++ P Y Y + G I SS ++ ++
Sbjct: 89 VFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEGNGRRVI-----SSDLIYENS 143
Query: 153 ----DW--LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
+W LE+ L T P+ + NP NP G E +KRI++LC L+ D +
Sbjct: 144 KYSVNWADLEEKLAT-PSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIH 202
>pdb|3BWN|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWO|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWO|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWO|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWO|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 84/222 (37%), Gaps = 31/222 (13%)
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG 221
K P + V +P NP GT I E ++ R D + ++ D Y + Y
Sbjct: 155 KKGPYIELVTSPNNPDGT-IRETVVNRPDD----DEAKVIHDFAYYWPHYTP---ITRRQ 206
Query: 222 DHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280
DH + LF+FS G G R+G+ + EV + + V S + L L
Sbjct: 207 DHDIMLFTFSXITGHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVL 266
Query: 281 QTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE-------KHLDD 333
+ + +E RE+++ L E VK E + + PE K L+
Sbjct: 267 KETCKSESESENFFKYGREMMKNRWEKLRE-VVK--ESDAFTLPKYPEAFCNYFGKSLES 323
Query: 334 FEVVRWLA-----------HRHGVVVIPGGACGC-RGHLRIS 363
+ WL RH V+ G CG + H+R+S
Sbjct: 324 YPAFAWLGTKEETDLVSELRRHKVMSRAGERCGSDKKHVRVS 365
>pdb|2ZUK|A Chain A, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam
Racemase From Achromobacter Obae Complexed With Epsilon
Caprolactam (Different Binding Mode)
pdb|2ZUK|B Chain B, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam
Racemase From Achromobacter Obae Complexed With Epsilon
Caprolactam (Different Binding Mode)
pdb|3DXV|A Chain A, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam
Racemase From Achromobacter Obae
pdb|3DXV|B Chain B, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam
Racemase From Achromobacter Obae
Length = 439
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 155 LEKTLETKPTPKL-VSVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTYEYFMY 211
L + L P + + + P G I P+ L++ +D+C+A G +V D
Sbjct: 190 LTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLAR 249
Query: 212 DGRKHC 217
GR HC
Sbjct: 250 SGRLHC 255
>pdb|3DXW|A Chain A, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam
Racemase From Achromobacter Obae Complexed With Epsilon
Caprolactam
pdb|3DXW|B Chain B, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam
Racemase From Achromobacter Obae Complexed With Epsilon
Caprolactam
Length = 452
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 155 LEKTLETKPTPKL-VSVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTYEYFMY 211
L + L P + + + P G I P+ L++ +D+C+A G +V D
Sbjct: 203 LTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLAR 262
Query: 212 DGRKHC 217
GR HC
Sbjct: 263 SGRLHC 268
>pdb|2OKJ|A Chain A, The X-Ray Crystal Structure Of The 67kda Isoform Of
Glutamic Acid Decarboxylase (Gad67)
pdb|2OKJ|B Chain B, The X-Ray Crystal Structure Of The 67kda Isoform Of
Glutamic Acid Decarboxylase (Gad67)
Length = 504
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 134 GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC 193
G ++++ C+ + AD+ K LE K + VN + Y ++ I+D+C
Sbjct: 212 GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADIC 271
Query: 194 KAAGSWLVVDNTYEYFMYDGRKH 216
+ WL VD + + RKH
Sbjct: 272 EKYNLWLHVDAAWGGGLLMSRKH 294
>pdb|3VP6|A Chain A, Structural Characterization Of Glutamic Acid
Decarboxylase; Insights Into The Mechanism Of
Autoinactivation
pdb|3VP6|B Chain B, Structural Characterization Of Glutamic Acid
Decarboxylase; Insights Into The Mechanism Of
Autoinactivation
Length = 511
Score = 31.6 bits (70), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 134 GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC 193
G ++++ C+ + AD+ K LE K + VN + Y ++ I+D+C
Sbjct: 215 GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADIC 274
Query: 194 KAAGSWLVVDNTYEYFMYDGRKH 216
+ WL VD + + RKH
Sbjct: 275 EKYNLWLHVDAAWGGGLLMSRKH 297
>pdb|2E7I|A Chain A, Crystal Structure Of Sep-Trna:cys-Trna Synthase From
Archaeoglobus Fulgidus
pdb|2E7I|B Chain B, Crystal Structure Of Sep-Trna:cys-Trna Synthase From
Archaeoglobus Fulgidus
pdb|2E7J|A Chain A, Crystal Structure Of Sep-Trna:cys-Trna Synthase From
Archaeoglobus Fulgidus
pdb|2E7J|B Chain B, Crystal Structure Of Sep-Trna:cys-Trna Synthase From
Archaeoglobus Fulgidus
Length = 371
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 94 VTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-- 151
VT GA +A ++ +L VVM +++SY++ + G+ LV KT +PD
Sbjct: 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALV----PKTDYPDYA 129
Query: 152 ---ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
++ + ETK ++V + P G Y +K+I+ +C L+V+ Y
Sbjct: 130 ITPENFAQTIEETKKRGEVVLALIT-YPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAY 186
>pdb|3VK2|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK3|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK4|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
Length = 398
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 10/107 (9%)
Query: 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTL 159
A + + TL GD V++ Y +++ H +G K H D AD
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGHTF------AFLHHGIGEFGVKLRHVDMADLQALEA 145
Query: 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
P +++ +P NP+ ++ + + ++ + + G+ +VVDNTY
Sbjct: 146 AMTPATRVIYFESPANPN-MHMAD--IAGVAKIARKHGATVVVDNTY 189
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 13/165 (7%)
Query: 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---- 221
+ + + NP NP G L + DL + ++VD + ++DG +H G
Sbjct: 152 RSILLCNPYNPLGXVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG-QHTVAAGVSDT 210
Query: 222 --DHVVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLLKVQDNIPICASIISQHLAL 277
+ + + S A+ + G + I + PS+ E + ++D AS + A
Sbjct: 211 AASVCITITAPSXAWNIAGLKCAQIIFSNPSDAEHWQQLSPVIKDG----ASTLGLIAAE 266
Query: 278 YSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL 322
+ + G +++ + V L N + + + GA A YL
Sbjct: 267 AAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPXQATYL 311
>pdb|2UVA|G Chain G, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UVA|H Chain H, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UVA|I Chain I, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UVA|J Chain J, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UVA|K Chain K, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UVA|L Chain L, Crystal Structure Of Fatty Acid Synthase From Thermomyces
Lanuginosus At 3.1 Angstrom Resolution. This File
Contains The Beta Subunits Of The Fatty Acid Synthase.
The Entire Crystal Structure Consists Of One
Heterododecameric Fatty Acid Synthase And Is Described In
Remark 400
pdb|2UVC|G Chain G, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVC|H Chain H, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVC|I Chain I, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVC|J Chain J, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVC|K Chain K, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
pdb|2UVC|L Chain L, Crystal Structure Of Fatty Acid Synthase Complexed With
Nadp+ From Thermomyces Lanuginosus At 3.1 Angstrom
Resolution. This File Contains The Beta Subunits Of The
Fatty Acid Synthase. The Entire Crystal Structure
Consists Of One Heterododecameric Fatty Acid Synthase And
Is Described In Remark 400
Length = 2060
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227
V + NP +P+ T I R + + L K LV DN +++GR EG V
Sbjct: 1186 VEITNPDDPAKTVISVREPSQSAKLVKTVEIKLVGDNEIALTLFEGR---TAEGGVVPLT 1242
Query: 228 FSFS 231
F F+
Sbjct: 1243 FRFT 1246
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227
V + NP NP+G I + + L + +++D + F D E + L
Sbjct: 148 VIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCL 207
Query: 228 F---SFSKAYGMMGWRVGY 243
F + +K + M G R GY
Sbjct: 208 FIIRAMTKFFAMPGIRFGY 226
>pdb|3AEJ|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEJ|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEJ|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEL|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEL|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine
Imine-Pyridoxamine-5'-Phosphate And Alpha-Amino-Alpha,
Beta-Butenoic Acid-Pyridoxal-5'-Phosphate
pdb|3AEM|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEM|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEM|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEN|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEN|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEO|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEO|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Methionine Alpha,
Beta-Enamine-Pyridoxamine- 5'-Phosphate
pdb|3AEP|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|B Chain B, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
pdb|3AEP|D Chain D, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Alpha-Amino-Alpha,
Beta-Butenoic Acid- Pyridoxal-5'-Phosphate
Length = 389
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
KP K+V + +P NP+ +K I+ +C G+ LVVD T+
Sbjct: 142 KPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATF 183
>pdb|3ACZ|A Chain A, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|B Chain B, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|C Chain C, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3ACZ|D Chain D, Crystal Structure Of Entamoeba Histolytica Methionine
Gamma-Lyase 1
pdb|3AEJ|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Tetramer Containing Michaelis
Complex And Methionine- Pyridoxal-5'-Phosphate
pdb|3AEM|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Methionine Imine- Pyridoxamine-5'-Phosphate
pdb|3AEN|A Chain A, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
pdb|3AEN|C Chain C, Reaction Intermediate Structure Of Entamoeba Histolytica
Methionine Gamma-Lyase 1 Containing Michaelis Complex
And Alpha-Amino-Alpha, Beta-Butenoic
Acid-Pyridoxal-5'-Phosphate
Length = 389
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
KP K+V + +P NP+ +K I+ +C G+ LVVD T+
Sbjct: 142 KPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATF 183
>pdb|2ZYH|A Chain A, Mutant A. Fulgidus Lipase S136a Complexed With Fatty Acid
Fragment
pdb|2ZYH|B Chain B, Mutant A. Fulgidus Lipase S136a Complexed With Fatty Acid
Fragment
Length = 475
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 286 WVTERVKDLVRN--REIIREALSPLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVRWLA 341
WV +R D + RE++R ++ P A V EG I + + + F + W A
Sbjct: 402 WVFDRGADGKSDLDREVVRYSIMPFMSAADLVVPAEGTISIAVKSRTGGEESFTIPAWSA 461
Query: 342 HRHGVVV 348
RH ++V
Sbjct: 462 DRHSIIV 468
>pdb|2ZYR|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Magnesium
pdb|2ZYR|B Chain B, A. Fulgidus Lipase With Fatty Acid Fragment And Magnesium
Length = 484
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 286 WVTERVKDLVRN--REIIREALSPLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVRWLA 341
WV +R D + RE++R ++ P A V EG I + + + F + W A
Sbjct: 402 WVFDRGADGKSDLDREVVRYSIMPFMSAADLVVPAEGTISIAVKSRTGGEESFTIPAWSA 461
Query: 342 HRHGVVV 348
RH ++V
Sbjct: 462 DRHSIIV 468
>pdb|2ZYI|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Calcium
pdb|2ZYI|B Chain B, A. Fulgidus Lipase With Fatty Acid Fragment And Calcium
Length = 475
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 286 WVTERVKDLVRN--REIIREALSPLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVRWLA 341
WV +R D + RE++R ++ P A V EG I + + + F + W A
Sbjct: 402 WVFDRGADGKSDLDREVVRYSIMPFMSAADLVVPAEGTISIAVKSRTGGEESFTIPAWSA 461
Query: 342 HRHGVVV 348
RH ++V
Sbjct: 462 DRHSIIV 468
>pdb|2ZYS|A Chain A, A. Fulgidus Lipase With Fatty Acid Fragment And Chloride
Length = 479
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 286 WVTERVKDLVRN--REIIREALSPLGEGA--VKGGEGAIYLWARLPEKHLDDFEVVRWLA 341
WV +R D + RE++R ++ P A V EG I + + + F + W A
Sbjct: 402 WVFDRGADGKSDLDREVVRYSIMPFMSAADLVVPAEGTISIAVKSRTGGEESFTIPAWSA 461
Query: 342 HRHGVVV 348
RH ++V
Sbjct: 462 DRHSIIV 468
>pdb|2ZYA|A Chain A, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With 6-
Phosphogluconate
pdb|2ZYA|B Chain B, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With 6-
Phosphogluconate
pdb|2ZYD|A Chain A, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With
Glucose
pdb|2ZYD|B Chain B, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With
Glucose
Length = 480
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC 354
RNRE+ E + +G G G EGA+ + +P + +E+V + + V G C
Sbjct: 123 RNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPC 181
>pdb|3FWN|A Chain A, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With 6-
Phosphogluconate And
2'-Monophosphoadenosine-5'-Diphosphate
pdb|3FWN|B Chain B, Dimeric 6-Phosphogluconate Dehydrogenase Complexed With 6-
Phosphogluconate And
2'-Monophosphoadenosine-5'-Diphosphate
Length = 480
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC 354
RNRE+ E + +G G G EGA+ + +P + +E+V + + V G C
Sbjct: 123 RNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPC 181
>pdb|1CS1|A Chain A, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|B Chain B, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|C Chain C, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
pdb|1CS1|D Chain D, Cystathionine Gamma-Synthase (Cgs) From Escherichia Coli
Length = 386
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206
D L L KP KLV V +P NP + + +I L + G+ VVDNT+
Sbjct: 126 DEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTF 176
>pdb|2OKK|A Chain A, The X-Ray Crystal Structure Of The 65kda Isoform Of
Glutamic Acid Decarboxylase (Gad65)
Length = 497
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 134 GVTHILVGPCSSKTLHPDADWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRIS 190
G +++ C + +D + LE K P LVS G + P L ++
Sbjct: 208 GTDSVILIKCDERGKMIPSDLERRILEAKQKGFVPFLVSATAGTTVYGAFDP---LLAVA 264
Query: 191 DLCKAAGSWLVVDNTYEYFMYDGRKH 216
D+CK W+ VD + + RKH
Sbjct: 265 DICKKYKIWMHVDAAWGGGLLMSRKH 290
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,719,075
Number of Sequences: 62578
Number of extensions: 552160
Number of successful extensions: 1640
Number of sequences better than 100.0: 118
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 1432
Number of HSP's gapped (non-prelim): 126
length of query: 400
length of database: 14,973,337
effective HSP length: 101
effective length of query: 299
effective length of database: 8,652,959
effective search space: 2587234741
effective search space used: 2587234741
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)