Query 015768
Match_columns 400
No_of_seqs 143 out of 2152
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 09:23:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015768.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015768hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 2.3E-55 5E-60 409.4 42.3 349 30-386 28-392 (393)
2 PLN00175 aminotransferase fami 100.0 4.1E-51 8.9E-56 387.1 44.0 370 5-384 30-412 (413)
3 PRK07366 succinyldiaminopimela 100.0 1.1E-50 2.4E-55 383.0 41.8 370 6-383 2-388 (388)
4 PRK05957 aspartate aminotransf 100.0 5.6E-50 1.2E-54 377.8 45.8 376 5-388 2-388 (389)
5 PRK06348 aspartate aminotransf 100.0 3.8E-50 8.3E-55 378.5 44.2 368 7-382 6-382 (384)
6 COG1168 MalY Bifunctional PLP- 100.0 8.4E-51 1.8E-55 355.5 35.9 357 22-386 17-387 (388)
7 PRK07681 aspartate aminotransf 100.0 4.4E-50 9.5E-55 380.0 43.9 367 5-381 3-384 (399)
8 PRK06207 aspartate aminotransf 100.0 3E-50 6.5E-55 380.9 42.5 351 30-387 39-404 (405)
9 PRK08960 hypothetical protein; 100.0 1.8E-49 3.9E-54 374.5 43.8 370 7-384 5-386 (387)
10 PRK06107 aspartate aminotransf 100.0 5E-49 1.1E-53 372.9 45.0 374 5-386 4-401 (402)
11 PRK08068 transaminase; Reviewe 100.0 3.3E-49 7.1E-54 373.0 43.0 369 5-382 3-386 (389)
12 PRK09276 LL-diaminopimelate am 100.0 4.4E-49 9.6E-54 372.0 43.8 368 5-381 2-384 (385)
13 PRK06108 aspartate aminotransf 100.0 6.4E-49 1.4E-53 371.1 44.0 367 9-384 3-381 (382)
14 TIGR03540 DapC_direct LL-diami 100.0 6.7E-49 1.4E-53 370.5 43.4 365 8-381 3-382 (383)
15 PRK07309 aromatic amino acid a 100.0 1.4E-48 3E-53 368.6 45.3 373 7-386 7-389 (391)
16 PLN00143 tyrosine/nicotianamin 100.0 6.1E-49 1.3E-53 372.4 42.7 356 27-388 29-407 (409)
17 PRK09147 succinyldiaminopimela 100.0 4.9E-49 1.1E-53 372.7 41.7 361 9-384 3-395 (396)
18 PLN02187 rooty/superroot1 100.0 6.7E-49 1.5E-53 375.6 42.9 357 29-390 65-443 (462)
19 PRK07683 aminotransferase A; V 100.0 1.7E-48 3.7E-53 367.4 45.1 369 8-385 6-383 (387)
20 PRK07682 hypothetical protein; 100.0 5.6E-49 1.2E-53 370.4 41.2 359 19-386 9-377 (378)
21 PRK08361 aspartate aminotransf 100.0 7.3E-49 1.6E-53 370.9 42.0 371 7-385 10-390 (391)
22 PRK09148 aminotransferase; Val 100.0 2.2E-48 4.7E-53 368.4 44.3 373 8-388 4-393 (405)
23 PRK08636 aspartate aminotransf 100.0 3.4E-48 7.4E-53 367.3 45.0 373 8-386 7-401 (403)
24 PRK07337 aminotransferase; Val 100.0 2.3E-48 5E-53 367.3 43.2 371 5-383 1-387 (388)
25 PRK07324 transaminase; Validat 100.0 1.8E-49 3.9E-54 371.8 34.9 348 26-386 22-371 (373)
26 PLN00145 tyrosine/nicotianamin 100.0 4.4E-48 9.6E-53 367.7 44.5 355 29-389 51-428 (430)
27 PTZ00433 tyrosine aminotransfe 100.0 3.1E-48 6.7E-53 368.5 43.2 375 8-387 9-410 (412)
28 PRK05942 aspartate aminotransf 100.0 3.5E-48 7.6E-53 366.4 43.2 369 5-382 6-389 (394)
29 PLN02656 tyrosine transaminase 100.0 4.5E-48 9.7E-53 366.8 42.9 357 27-388 28-406 (409)
30 PRK12414 putative aminotransfe 100.0 7E-48 1.5E-52 362.9 43.0 362 9-381 9-383 (384)
31 PRK05764 aspartate aminotransf 100.0 1.1E-47 2.5E-52 363.6 44.7 374 5-386 2-392 (393)
32 KOG0257 Kynurenine aminotransf 100.0 3E-49 6.5E-54 349.1 31.3 366 7-380 8-414 (420)
33 PRK09082 methionine aminotrans 100.0 3.6E-48 7.8E-53 365.3 40.5 365 7-381 8-385 (386)
34 PRK13355 bifunctional HTH-doma 100.0 7E-48 1.5E-52 375.0 43.7 374 5-387 117-516 (517)
35 PRK08912 hypothetical protein; 100.0 8.7E-48 1.9E-52 363.2 43.0 368 8-385 5-386 (387)
36 PRK06855 aminotransferase; Val 100.0 1.6E-47 3.5E-52 364.8 43.0 358 27-387 29-431 (433)
37 TIGR03538 DapC_gpp succinyldia 100.0 2E-47 4.3E-52 361.4 42.0 354 14-382 7-392 (393)
38 KOG0259 Tyrosine aminotransfer 100.0 2.9E-47 6.3E-52 330.6 38.0 357 29-389 60-437 (447)
39 PRK08363 alanine aminotransfer 100.0 4.4E-47 9.6E-52 359.6 43.0 353 27-386 27-395 (398)
40 PRK07568 aspartate aminotransf 100.0 8E-47 1.7E-51 358.3 44.6 373 5-388 1-395 (397)
41 PRK07550 hypothetical protein; 100.0 3.9E-47 8.6E-52 358.6 42.2 368 8-382 3-384 (386)
42 PTZ00377 alanine aminotransfer 100.0 4.2E-47 9.2E-52 366.7 42.3 354 29-388 45-478 (481)
43 PRK06290 aspartate aminotransf 100.0 5.3E-47 1.1E-51 358.1 40.9 347 29-386 43-406 (410)
44 TIGR01264 tyr_amTase_E tyrosin 100.0 6.8E-47 1.5E-51 358.6 41.8 355 27-386 28-400 (401)
45 PRK07777 aminotransferase; Val 100.0 3.2E-46 7E-51 352.5 43.2 364 10-383 5-384 (387)
46 PRK05839 hypothetical protein; 100.0 2.8E-46 6.1E-51 350.5 41.3 334 28-384 22-373 (374)
47 PRK08175 aminotransferase; Val 100.0 7.6E-46 1.7E-50 350.6 42.7 353 25-385 24-389 (395)
48 PLN02450 1-aminocyclopropane-1 100.0 1.6E-46 3.4E-51 359.9 37.7 351 30-387 38-432 (468)
49 TIGR03537 DapC succinyldiamino 100.0 5.4E-46 1.2E-50 346.1 40.0 337 32-381 2-349 (350)
50 TIGR01265 tyr_nico_aTase tyros 100.0 1.2E-45 2.6E-50 349.9 43.1 357 25-386 26-402 (403)
51 PRK09265 aminotransferase AlaT 100.0 2.1E-45 4.7E-50 348.5 44.8 372 7-387 6-403 (404)
52 PRK07590 L,L-diaminopimelate a 100.0 1.2E-45 2.5E-50 350.7 40.2 339 29-383 33-409 (409)
53 PRK15481 transcriptional regul 100.0 6.4E-46 1.4E-50 354.9 37.7 338 30-384 85-430 (431)
54 COG1167 ARO8 Transcriptional r 100.0 1.5E-45 3.2E-50 351.2 39.8 349 30-388 89-458 (459)
55 PLN02607 1-aminocyclopropane-1 100.0 2.1E-45 4.6E-50 349.3 39.8 377 7-390 13-442 (447)
56 PRK06225 aspartate aminotransf 100.0 1.5E-44 3.2E-49 340.4 43.0 351 25-388 23-379 (380)
57 PLN02231 alanine transaminase 100.0 6.7E-45 1.4E-49 351.3 41.6 360 25-389 124-531 (534)
58 PLN02376 1-aminocyclopropane-1 100.0 4.2E-45 9.1E-50 350.9 39.5 376 7-388 12-441 (496)
59 PRK07865 N-succinyldiaminopime 100.0 6E-45 1.3E-49 341.1 39.7 349 5-380 1-363 (364)
60 PRK09275 aspartate aminotransf 100.0 4E-45 8.6E-50 347.9 33.3 350 30-388 100-520 (527)
61 PRK02610 histidinol-phosphate 100.0 2.1E-44 4.5E-49 338.1 36.7 337 30-386 28-372 (374)
62 PRK01533 histidinol-phosphate 100.0 1.3E-44 2.7E-49 337.4 33.1 328 28-388 27-358 (366)
63 TIGR03542 DAPAT_plant LL-diami 100.0 1.6E-43 3.4E-48 335.4 40.2 339 29-383 32-402 (402)
64 COG0079 HisC Histidinol-phosph 100.0 7.1E-44 1.5E-48 326.4 35.9 330 30-385 22-354 (356)
65 PRK14809 histidinol-phosphate 100.0 6.1E-44 1.3E-48 333.4 35.6 327 28-384 28-356 (357)
66 PRK06836 aspartate aminotransf 100.0 1.5E-42 3.3E-47 327.7 44.8 342 29-386 32-392 (394)
67 TIGR03801 asp_4_decarbox aspar 100.0 1E-43 2.2E-48 337.7 34.7 348 30-388 94-519 (521)
68 PRK09257 aromatic amino acid a 100.0 2.1E-43 4.5E-48 334.1 36.0 356 11-383 5-396 (396)
69 TIGR03539 DapC_actino succinyl 100.0 9.4E-43 2E-47 325.1 39.4 335 18-379 9-356 (357)
70 PLN02672 methionine S-methyltr 100.0 7.2E-43 1.6E-47 351.2 40.9 346 28-384 695-1079(1082)
71 PTZ00376 aspartate aminotransf 100.0 4E-43 8.6E-48 332.6 35.8 338 30-385 29-403 (404)
72 PRK03158 histidinol-phosphate 100.0 3.5E-43 7.5E-48 328.9 35.0 327 29-382 28-358 (359)
73 PRK06358 threonine-phosphate d 100.0 1E-42 2.3E-47 324.0 37.5 328 30-383 19-353 (354)
74 PRK09440 avtA valine--pyruvate 100.0 2.7E-42 5.8E-47 328.9 39.0 349 30-389 30-415 (416)
75 PRK08056 threonine-phosphate d 100.0 2.2E-42 4.7E-47 322.5 37.6 330 29-383 19-353 (356)
76 PRK04870 histidinol-phosphate 100.0 8.3E-43 1.8E-47 325.8 34.2 328 29-382 25-355 (356)
77 PLN03026 histidinol-phosphate 100.0 1.8E-42 3.9E-47 325.1 36.5 326 29-381 51-378 (380)
78 PRK08153 histidinol-phosphate 100.0 2.6E-42 5.6E-47 323.2 36.8 338 27-388 29-368 (369)
79 PF00155 Aminotran_1_2: Aminot 100.0 3E-43 6.5E-48 330.3 28.8 340 31-379 2-363 (363)
80 PRK05166 histidinol-phosphate 100.0 4.9E-42 1.1E-46 321.9 36.0 330 27-381 33-367 (371)
81 PRK14807 histidinol-phosphate 100.0 1.5E-41 3.2E-46 316.2 37.4 326 30-382 22-349 (351)
82 PRK05387 histidinol-phosphate 100.0 8.1E-42 1.8E-46 319.1 34.7 329 29-384 23-352 (353)
83 PRK02731 histidinol-phosphate 100.0 2E-41 4.4E-46 318.0 37.5 332 28-384 30-365 (367)
84 PRK07392 threonine-phosphate d 100.0 1.4E-41 3.1E-46 317.7 35.7 311 30-366 22-342 (360)
85 PRK09105 putative aminotransfe 100.0 1.7E-41 3.8E-46 317.0 35.1 324 30-383 43-368 (370)
86 PLN02368 alanine transaminase 100.0 1.6E-41 3.5E-46 318.6 33.4 316 7-327 11-396 (407)
87 TIGR01141 hisC histidinol-phos 100.0 1.3E-41 2.8E-46 316.9 32.4 325 30-379 19-345 (346)
88 PRK01688 histidinol-phosphate 100.0 1.4E-41 3.1E-46 316.0 29.8 319 30-379 28-350 (351)
89 PRK03317 histidinol-phosphate 100.0 1E-40 2.2E-45 313.0 35.6 331 31-385 27-364 (368)
90 PRK00950 histidinol-phosphate 100.0 1.8E-40 3.8E-45 311.0 34.7 326 28-383 32-360 (361)
91 PLN02397 aspartate transaminas 100.0 3.1E-40 6.7E-45 313.6 36.7 356 12-384 28-420 (423)
92 PRK04781 histidinol-phosphate 100.0 3E-40 6.4E-45 308.5 35.3 321 31-381 32-359 (364)
93 PRK07908 hypothetical protein; 100.0 7.3E-40 1.6E-44 305.0 37.2 322 29-384 21-346 (349)
94 PRK14808 histidinol-phosphate 100.0 1E-39 2.2E-44 301.3 34.2 317 28-381 17-333 (335)
95 PRK03967 histidinol-phosphate 100.0 1.3E-39 2.7E-44 301.3 34.5 318 29-385 17-334 (337)
96 PRK08637 hypothetical protein; 100.0 3E-39 6.4E-44 304.7 36.1 321 59-386 35-387 (388)
97 PRK04635 histidinol-phosphate 100.0 7E-40 1.5E-44 305.4 30.5 318 30-381 31-351 (354)
98 PRK06425 histidinol-phosphate 100.0 3.2E-39 6.9E-44 298.1 33.9 310 31-383 17-331 (332)
99 PRK03321 putative aminotransfe 100.0 4E-39 8.6E-44 300.6 32.8 325 30-384 22-350 (352)
100 KOG0256 1-aminocyclopropane-1- 100.0 6.8E-39 1.5E-43 281.0 31.3 323 61-389 114-465 (471)
101 PRK06959 putative threonine-ph 100.0 1.3E-38 2.9E-43 294.1 35.0 313 30-389 24-337 (339)
102 PRK05664 threonine-phosphate d 100.0 1E-37 2.2E-42 287.7 35.7 305 31-382 21-325 (330)
103 TIGR01140 L_thr_O3P_dcar L-thr 100.0 3E-38 6.5E-43 291.4 31.8 311 29-379 16-329 (330)
104 PRK08354 putative aminotransfe 100.0 1.6E-37 3.6E-42 284.1 36.1 300 30-380 8-307 (311)
105 cd00609 AAT_like Aspartate ami 100.0 3.7E-36 7.9E-41 280.9 39.0 339 33-380 1-349 (350)
106 KOG0634 Aromatic amino acid am 100.0 2.6E-35 5.6E-40 260.7 31.1 322 61-389 93-470 (472)
107 PRK10874 cysteine sulfinate de 100.0 2.3E-33 5E-38 266.4 34.7 348 20-386 7-399 (401)
108 TIGR03392 FeS_syn_CsdA cystein 100.0 2.6E-33 5.6E-38 265.7 34.6 342 22-386 6-396 (398)
109 PRK13238 tnaA tryptophanase/L- 100.0 5.7E-33 1.2E-37 264.1 34.7 354 16-385 22-433 (460)
110 PLN02822 serine palmitoyltrans 100.0 3.2E-33 6.9E-38 268.2 31.9 338 28-388 107-480 (481)
111 TIGR01822 2am3keto_CoA 2-amino 100.0 3.3E-32 7.1E-37 258.1 35.2 332 27-386 35-390 (393)
112 PRK06939 2-amino-3-ketobutyrat 100.0 2.2E-32 4.8E-37 259.8 33.2 338 27-386 39-394 (397)
113 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.4E-31 5.2E-36 245.0 37.0 307 40-383 30-345 (346)
114 TIGR00858 bioF 8-amino-7-oxono 100.0 9.7E-32 2.1E-36 252.1 33.9 331 27-380 13-360 (360)
115 TIGR01825 gly_Cac_T_rel pyrido 100.0 2.5E-31 5.3E-36 251.5 35.0 336 27-385 30-381 (385)
116 TIGR01979 sufS cysteine desulf 100.0 1.5E-31 3.2E-36 254.4 33.5 335 29-386 16-402 (403)
117 PRK09295 bifunctional cysteine 100.0 2.2E-31 4.7E-36 253.0 33.0 336 30-384 22-403 (406)
118 PLN02855 Bifunctional selenocy 100.0 2.1E-31 4.6E-36 254.4 32.9 336 30-387 31-420 (424)
119 PRK05958 8-amino-7-oxononanoat 100.0 6E-31 1.3E-35 249.0 35.1 333 28-383 37-385 (385)
120 cd06451 AGAT_like Alanine-glyo 100.0 4.5E-31 9.8E-36 247.0 33.3 320 42-383 8-355 (356)
121 KOG0633 Histidinol phosphate a 100.0 7.8E-32 1.7E-36 223.1 24.1 331 27-382 38-374 (375)
122 COG0520 csdA Selenocysteine ly 100.0 1.4E-30 3.1E-35 242.5 34.9 338 29-384 20-404 (405)
123 PRK13392 5-aminolevulinate syn 100.0 6.4E-31 1.4E-35 250.0 32.6 332 29-386 45-398 (410)
124 PRK02948 cysteine desulfurase; 100.0 1.8E-31 4E-36 251.7 28.6 336 33-388 2-377 (381)
125 COG3977 Alanine-alpha-ketoisov 100.0 1.3E-30 2.9E-35 220.0 30.4 359 16-389 17-415 (417)
126 PRK02627 acetylornithine amino 100.0 6.6E-31 1.4E-35 249.4 32.3 337 27-386 36-395 (396)
127 COG1104 NifS Cysteine sulfinat 100.0 3.2E-31 7E-36 237.5 28.2 333 43-390 12-382 (386)
128 PLN02721 threonine aldolase 100.0 1.2E-30 2.7E-35 243.9 32.2 329 31-385 6-352 (353)
129 cd06502 TA_like Low-specificit 100.0 1.4E-30 3E-35 242.1 31.4 318 39-381 5-337 (338)
130 PRK10534 L-threonine aldolase; 100.0 4.9E-31 1.1E-35 244.3 28.2 319 32-384 1-332 (333)
131 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.8E-30 3.8E-35 246.5 32.6 329 32-379 18-397 (397)
132 cd06454 KBL_like KBL_like; thi 100.0 2.8E-30 6E-35 241.2 33.1 330 31-382 2-348 (349)
133 PRK01278 argD acetylornithine 100.0 2.4E-30 5.1E-35 244.5 32.6 336 27-385 28-388 (389)
134 TIGR01821 5aminolev_synth 5-am 100.0 4.9E-30 1.1E-34 243.5 33.6 336 29-386 44-397 (402)
135 TIGR03403 nifS_epsilon cystein 100.0 4.5E-30 9.7E-35 242.3 33.0 329 43-388 10-378 (382)
136 cd00378 SHMT Serine-glycine hy 100.0 5.8E-30 1.3E-34 243.4 33.4 346 23-386 12-386 (402)
137 cd00617 Tnase_like Tryptophana 100.0 8E-30 1.7E-34 239.1 33.5 351 21-386 2-409 (431)
138 PRK03244 argD acetylornithine 100.0 9.6E-31 2.1E-35 248.1 27.7 337 27-386 40-395 (398)
139 PLN02409 serine--glyoxylate am 100.0 9.1E-30 2E-34 240.7 32.9 327 43-387 19-374 (401)
140 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1.3E-29 2.8E-34 237.5 32.8 318 44-385 20-368 (370)
141 TIGR03402 FeS_nifS cysteine de 100.0 8.6E-30 1.9E-34 240.2 31.7 330 43-388 10-375 (379)
142 PLN02483 serine palmitoyltrans 100.0 2.9E-29 6.2E-34 241.3 35.8 334 29-387 99-468 (489)
143 PRK07179 hypothetical protein; 100.0 2.6E-29 5.7E-34 238.7 35.2 330 28-386 52-399 (407)
144 PRK09064 5-aminolevulinate syn 100.0 3.1E-29 6.8E-34 238.4 35.7 336 29-386 45-398 (407)
145 TIGR02326 transamin_PhnW 2-ami 100.0 2.2E-29 4.9E-34 236.0 33.5 301 69-384 32-361 (363)
146 cd00610 OAT_like Acetyl ornith 100.0 3.8E-30 8.1E-35 245.7 28.2 342 27-383 33-413 (413)
147 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 2.3E-29 5E-34 235.5 32.7 322 40-383 9-360 (361)
148 TIGR00707 argD acetylornithine 100.0 1.1E-29 2.3E-34 239.8 29.9 332 27-383 24-379 (379)
149 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.2E-29 2.7E-34 239.1 30.0 333 34-381 2-375 (376)
150 PRK13393 5-aminolevulinate syn 100.0 8.1E-29 1.8E-33 235.2 35.7 336 29-386 44-397 (406)
151 cd06453 SufS_like Cysteine des 100.0 1.7E-29 3.8E-34 237.8 29.8 319 43-379 10-373 (373)
152 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 9E-29 2E-33 231.5 33.4 318 43-382 9-354 (355)
153 cd00613 GDC-P Glycine cleavage 100.0 1.1E-28 2.4E-33 234.3 32.6 329 30-379 20-398 (398)
154 PRK13479 2-aminoethylphosphona 100.0 2.7E-28 5.9E-33 229.1 34.9 321 43-386 15-364 (368)
155 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 2.6E-28 5.7E-33 229.9 34.3 334 31-386 19-382 (387)
156 PRK13520 L-tyrosine decarboxyl 100.0 6E-28 1.3E-32 227.3 35.9 346 17-384 6-370 (371)
157 TIGR02006 IscS cysteine desulf 100.0 1.7E-28 3.7E-33 232.7 31.6 336 32-388 4-380 (402)
158 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.3E-27 2.9E-32 225.0 36.9 343 16-381 3-372 (373)
159 KOG0258 Alanine aminotransfera 100.0 1.4E-28 3.1E-33 214.8 27.7 339 44-388 87-472 (475)
160 PRK04073 rocD ornithine--oxo-a 100.0 1.7E-28 3.7E-33 232.1 30.8 335 27-383 37-395 (396)
161 cd06450 DOPA_deC_like DOPA dec 100.0 5.6E-29 1.2E-33 231.9 26.1 308 44-382 10-345 (345)
162 PRK02936 argD acetylornithine 100.0 4.2E-28 9.1E-33 228.5 32.1 332 27-383 26-377 (377)
163 PRK00011 glyA serine hydroxyme 100.0 1.4E-27 3E-32 227.8 35.3 359 10-385 5-389 (416)
164 PRK05093 argD bifunctional N-s 100.0 1.1E-27 2.5E-32 227.0 31.8 334 27-386 37-401 (403)
165 PRK14012 cysteine desulfurase; 100.0 1.5E-27 3.3E-32 226.4 32.2 332 33-387 5-381 (404)
166 PRK08088 4-aminobutyrate amino 100.0 1.3E-27 2.8E-32 227.6 31.6 349 27-386 38-424 (425)
167 PLN03227 serine palmitoyltrans 100.0 3E-27 6.5E-32 222.1 31.8 334 33-387 1-384 (392)
168 PRK07049 methionine gamma-lyas 100.0 2.1E-27 4.5E-32 224.7 30.5 291 67-384 82-425 (427)
169 COG0075 Serine-pyruvate aminot 100.0 1.1E-26 2.3E-31 210.2 33.5 327 43-388 15-366 (383)
170 PLN02651 cysteine desulfurase 100.0 7.7E-28 1.7E-32 225.4 26.8 311 43-373 10-364 (364)
171 PRK06234 methionine gamma-lyas 100.0 5.3E-27 1.2E-31 220.9 30.8 288 66-386 62-398 (400)
172 TIGR01437 selA_rel uncharacter 100.0 7.6E-27 1.7E-31 217.3 31.3 318 30-382 8-362 (363)
173 COG4992 ArgD Ornithine/acetylo 100.0 4.4E-27 9.6E-32 210.5 28.3 343 27-389 39-402 (404)
174 PTZ00125 ornithine aminotransf 100.0 8.7E-27 1.9E-31 221.4 32.2 342 27-387 28-397 (400)
175 PRK00854 rocD ornithine--oxo-a 100.0 8.1E-27 1.8E-31 221.5 31.6 331 27-384 38-400 (401)
176 COG0156 BioF 7-keto-8-aminopel 100.0 2.1E-26 4.5E-31 210.4 32.9 332 28-382 37-387 (388)
177 PRK00451 glycine dehydrogenase 100.0 1.2E-26 2.5E-31 223.3 32.1 327 31-383 69-446 (447)
178 PRK04260 acetylornithine amino 100.0 8.6E-27 1.9E-31 219.1 30.5 333 27-383 26-375 (375)
179 PRK12381 bifunctional succinyl 100.0 2.2E-26 4.7E-31 218.0 32.9 345 27-390 36-404 (406)
180 TIGR03246 arg_catab_astC succi 100.0 9.4E-27 2E-31 219.8 30.2 341 27-386 32-396 (397)
181 PF00266 Aminotran_5: Aminotra 100.0 2.2E-26 4.8E-31 216.3 30.5 315 43-375 10-371 (371)
182 PLN02242 methionine gamma-lyas 100.0 2.7E-26 5.9E-31 216.3 29.8 286 68-386 76-416 (418)
183 PRK08861 cystathionine gamma-s 100.0 3.8E-26 8.3E-31 212.7 29.9 291 67-389 52-387 (388)
184 PLN02955 8-amino-7-oxononanoat 100.0 1.5E-25 3.3E-30 209.4 33.5 325 29-386 101-462 (476)
185 PLN00144 acetylornithine trans 100.0 7.1E-26 1.5E-30 212.1 31.3 338 27-386 12-381 (382)
186 COG1448 TyrB Aspartate/tyrosin 100.0 5.4E-26 1.2E-30 200.0 28.3 353 16-382 10-395 (396)
187 PRK08247 cystathionine gamma-s 100.0 4.3E-26 9.4E-31 212.7 29.2 283 69-385 53-364 (366)
188 PRK06777 4-aminobutyrate amino 100.0 9.1E-26 2E-30 213.9 31.7 346 27-384 37-420 (421)
189 PRK07505 hypothetical protein; 100.0 3.7E-25 7.9E-30 209.9 35.5 332 27-385 43-399 (402)
190 PRK06767 methionine gamma-lyas 100.0 7.7E-26 1.7E-30 212.3 30.5 287 66-385 59-385 (386)
191 TIGR00700 GABAtrnsam 4-aminobu 100.0 5.1E-26 1.1E-30 216.1 29.4 347 27-384 30-419 (420)
192 PRK08776 cystathionine gamma-s 100.0 1.2E-25 2.5E-30 211.3 31.3 292 68-387 56-392 (405)
193 PRK08045 cystathionine gamma-s 100.0 8.7E-26 1.9E-30 211.1 30.2 289 68-388 52-385 (386)
194 TIGR00713 hemL glutamate-1-sem 100.0 5.2E-26 1.1E-30 217.1 28.8 336 27-385 45-422 (423)
195 cd00614 CGS_like CGS_like: Cys 100.0 1E-25 2.2E-30 210.7 29.8 281 68-383 40-368 (369)
196 PRK09792 4-aminobutyrate trans 100.0 2.8E-25 6E-30 210.6 32.6 344 27-384 37-420 (421)
197 PRK06918 4-aminobutyrate amino 100.0 2.4E-25 5.3E-30 213.1 32.4 351 27-389 51-447 (451)
198 TIGR03235 DNA_S_dndA cysteine 100.0 1.9E-26 4.2E-31 215.3 24.3 310 43-373 9-346 (353)
199 PRK08249 cystathionine gamma-s 100.0 1.3E-25 2.8E-30 210.8 29.8 287 68-387 64-395 (398)
200 PRK08133 O-succinylhomoserine 100.0 1.3E-25 2.8E-30 210.8 29.7 279 70-384 63-389 (390)
201 PRK09028 cystathionine beta-ly 100.0 3.1E-25 6.8E-30 206.3 31.9 293 63-388 54-390 (394)
202 PRK07504 O-succinylhomoserine 100.0 2E-25 4.3E-30 209.9 30.7 287 67-386 64-396 (398)
203 TIGR02080 O_succ_thio_ly O-suc 100.0 1.2E-25 2.6E-30 210.0 29.1 287 67-385 50-381 (382)
204 PRK04366 glycine dehydrogenase 99.9 8.4E-25 1.8E-29 210.5 34.0 340 35-388 73-451 (481)
205 PRK04612 argD acetylornithine 99.9 1.4E-24 3.1E-29 204.4 34.4 343 27-388 37-406 (408)
206 PRK08360 4-aminobutyrate amino 99.9 1E-24 2.2E-29 207.4 33.5 352 27-396 38-436 (443)
207 PRK07503 methionine gamma-lyas 99.9 5.7E-25 1.2E-29 207.2 30.8 286 68-389 65-400 (403)
208 PRK07810 O-succinylhomoserine 99.9 4E-25 8.6E-30 207.8 29.5 216 68-311 70-290 (403)
209 PRK07495 4-aminobutyrate amino 99.9 1.7E-24 3.6E-29 205.0 33.9 348 27-387 37-423 (425)
210 PF12897 Aminotran_MocR: Alani 99.9 5.6E-25 1.2E-29 193.9 28.2 312 61-386 61-416 (425)
211 PRK13580 serine hydroxymethylt 99.9 1.3E-24 2.9E-29 203.3 32.3 360 11-386 30-446 (493)
212 TIGR01814 kynureninase kynuren 99.9 1E-24 2.2E-29 207.1 32.2 343 16-383 7-405 (406)
213 PRK13034 serine hydroxymethylt 99.9 3.7E-24 8E-29 202.7 35.7 362 7-386 5-393 (416)
214 PLN02624 ornithine-delta-amino 99.9 1E-24 2.2E-29 209.3 32.0 344 27-387 72-446 (474)
215 TIGR01885 Orn_aminotrans ornit 99.9 5.7E-25 1.2E-29 208.5 30.0 332 27-383 34-400 (401)
216 PRK06460 hypothetical protein; 99.9 4.8E-25 1E-29 205.9 28.9 287 67-386 44-375 (376)
217 TIGR01325 O_suc_HS_sulf O-succ 99.9 7.8E-25 1.7E-29 205.1 30.4 214 68-310 54-272 (380)
218 PRK05937 8-amino-7-oxononanoat 99.9 4.2E-24 9.1E-29 200.3 34.9 330 29-388 3-353 (370)
219 PRK07050 cystathionine beta-ly 99.9 1E-24 2.2E-29 204.6 30.5 284 75-386 68-392 (394)
220 TIGR01328 met_gam_lyase methio 99.9 1.5E-24 3.2E-29 203.6 31.0 285 68-385 59-390 (391)
221 TIGR02379 ECA_wecE TDP-4-keto- 99.9 4.9E-24 1.1E-28 199.0 33.7 310 45-383 10-375 (376)
222 PRK07811 cystathionine gamma-s 99.9 1.4E-24 3.1E-29 203.6 29.9 287 66-384 59-387 (388)
223 PRK08574 cystathionine gamma-s 99.9 1.1E-24 2.3E-29 203.9 28.8 283 67-385 52-384 (385)
224 PTZ00094 serine hydroxymethylt 99.9 4.3E-24 9.4E-29 204.7 33.2 357 13-386 17-409 (452)
225 PRK07582 cystathionine gamma-l 99.9 2.7E-24 5.9E-29 200.3 30.6 280 66-385 49-365 (366)
226 TIGR01329 cysta_beta_ly_E cyst 99.9 2.3E-24 5E-29 201.5 29.9 283 73-385 48-375 (378)
227 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.1E-23 2.4E-28 197.6 33.9 310 45-383 13-377 (379)
228 PRK08117 4-aminobutyrate amino 99.9 7.5E-24 1.6E-28 202.3 32.7 348 27-387 40-431 (433)
229 PRK05968 hypothetical protein; 99.9 6.6E-24 1.4E-28 199.2 31.5 282 70-386 65-387 (389)
230 COG2008 GLY1 Threonine aldolas 99.9 3.8E-24 8.3E-29 187.9 27.7 322 40-383 8-341 (342)
231 PRK05964 adenosylmethionine--8 99.9 9.1E-24 2E-28 201.1 32.7 345 27-386 39-423 (423)
232 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.2E-23 2.7E-28 196.5 32.9 302 50-380 3-352 (352)
233 TIGR01324 cysta_beta_ly_B cyst 99.9 6E-24 1.3E-28 197.9 29.1 283 70-385 52-376 (377)
234 PRK06058 4-aminobutyrate amino 99.9 1.2E-23 2.5E-28 200.9 31.8 343 27-385 53-442 (443)
235 PRK08248 O-acetylhomoserine am 99.9 8.3E-24 1.8E-28 200.0 29.3 287 74-386 66-428 (431)
236 PRK05967 cystathionine beta-ly 99.9 1E-23 2.3E-28 195.7 29.0 295 64-386 56-392 (395)
237 PRK07269 cystathionine gamma-s 99.9 6.8E-24 1.5E-28 196.8 27.2 283 66-384 52-363 (364)
238 PRK08064 cystathionine beta-ly 99.9 4.1E-23 9E-28 193.9 32.3 282 72-386 54-383 (390)
239 TIGR02407 ectoine_ectB diamino 99.9 2.3E-23 5E-28 197.0 30.7 343 27-385 32-412 (412)
240 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.4E-22 3.1E-27 190.1 35.5 309 45-383 10-374 (375)
241 PRK05939 hypothetical protein; 99.9 5E-23 1.1E-27 193.1 31.4 282 74-385 49-396 (397)
242 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.3E-22 2.8E-27 191.1 34.1 311 45-383 9-380 (380)
243 KOG1549 Cysteine desulfurase N 99.9 1.4E-23 3.1E-28 189.0 25.7 342 29-389 41-422 (428)
244 PLN02509 cystathionine beta-ly 99.9 3.1E-23 6.7E-28 196.3 29.1 292 62-385 125-461 (464)
245 PRK06702 O-acetylhomoserine am 99.9 3E-23 6.5E-28 194.6 28.7 290 68-388 61-427 (432)
246 PRK06084 O-acetylhomoserine am 99.9 3.2E-23 6.9E-28 195.9 28.9 288 69-386 59-423 (425)
247 COG0399 WecE Predicted pyridox 99.9 2.4E-22 5.2E-27 182.4 33.2 314 45-385 14-373 (374)
248 PRK09264 diaminobutyrate--2-ox 99.9 8E-23 1.7E-27 194.3 31.3 348 27-388 36-419 (425)
249 PRK00062 glutamate-1-semialdeh 99.9 3.8E-23 8.3E-28 196.7 28.9 342 27-386 47-425 (426)
250 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 3.7E-23 8E-28 196.0 28.6 214 69-310 58-307 (418)
251 COG0001 HemL Glutamate-1-semia 99.9 2.4E-22 5.2E-27 182.1 32.2 341 27-388 50-431 (432)
252 COG0160 GabT 4-aminobutyrate a 99.9 8.6E-23 1.9E-27 188.6 29.9 346 27-386 53-446 (447)
253 PRK07671 cystathionine beta-ly 99.9 5.2E-23 1.1E-27 192.2 28.8 213 73-310 51-268 (377)
254 PRK08114 cystathionine beta-ly 99.9 1.8E-22 4E-27 187.2 31.3 290 67-386 57-394 (395)
255 TIGR01788 Glu-decarb-GAD gluta 99.9 2.4E-22 5.2E-27 189.2 31.7 331 43-386 52-430 (431)
256 PRK08593 4-aminobutyrate amino 99.9 2.3E-22 5E-27 191.6 31.7 352 27-393 39-437 (445)
257 PRK06176 cystathionine gamma-s 99.9 1.3E-22 2.7E-27 189.6 28.8 279 74-385 52-378 (380)
258 PLN03226 serine hydroxymethylt 99.9 7.8E-22 1.7E-26 188.3 34.3 363 11-386 15-420 (475)
259 PRK02769 histidine decarboxyla 99.9 7.2E-22 1.6E-26 183.6 32.9 315 46-387 36-374 (380)
260 PRK03715 argD acetylornithine 99.9 5.7E-22 1.2E-26 186.3 31.9 335 27-386 33-394 (395)
261 TIGR03372 putres_am_tran putre 99.9 4.6E-22 1E-26 188.1 31.3 341 27-383 72-442 (442)
262 PRK11522 putrescine--2-oxoglut 99.9 8.7E-22 1.9E-26 187.6 32.3 346 27-388 79-454 (459)
263 KOG2862 Alanine-glyoxylate ami 99.9 9.8E-22 2.1E-26 167.4 28.8 322 50-386 30-383 (385)
264 PRK07482 hypothetical protein; 99.9 1.3E-21 2.9E-26 187.0 33.5 346 27-388 47-457 (461)
265 PRK08134 O-acetylhomoserine am 99.9 6.6E-22 1.4E-26 187.0 30.4 290 70-389 66-431 (433)
266 COG0112 GlyA Glycine/serine hy 99.9 2.5E-21 5.5E-26 171.2 31.7 362 11-387 7-392 (413)
267 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 4.3E-22 9.3E-27 184.4 27.9 288 67-384 50-386 (386)
268 TIGR01364 serC_1 phosphoserine 99.9 8.3E-22 1.8E-26 182.0 29.6 315 43-385 2-348 (349)
269 PLN02724 Molybdenum cofactor s 99.9 4.3E-22 9.3E-27 202.6 30.3 358 19-386 21-489 (805)
270 PRK07812 O-acetylhomoserine am 99.9 7.2E-22 1.6E-26 186.5 29.4 290 74-388 71-434 (436)
271 TIGR00709 dat 2,4-diaminobutyr 99.9 1.2E-21 2.6E-26 186.8 31.2 346 27-388 36-438 (442)
272 PRK06541 hypothetical protein; 99.9 1.9E-21 4.1E-26 185.7 32.3 347 27-388 49-458 (460)
273 PRK07986 adenosylmethionine--8 99.9 9.3E-22 2E-26 185.9 29.6 340 27-385 40-423 (428)
274 KOG1368 Threonine aldolase [Am 99.9 8E-22 1.7E-26 166.9 25.5 322 43-386 33-369 (384)
275 PLN02271 serine hydroxymethylt 99.9 5.5E-21 1.2E-25 179.6 33.7 358 13-384 131-539 (586)
276 PRK03080 phosphoserine aminotr 99.9 8.2E-22 1.8E-26 184.9 28.1 316 43-387 22-375 (378)
277 PLN02414 glycine dehydrogenase 99.9 1.7E-21 3.7E-26 197.0 32.0 344 29-388 524-910 (993)
278 PRK06062 hypothetical protein; 99.9 4E-21 8.7E-26 183.2 32.4 345 27-388 50-448 (451)
279 PLN03032 serine decarboxylase; 99.9 5.2E-21 1.1E-25 176.5 32.0 309 45-381 36-372 (374)
280 cd00615 Orn_deC_like Ornithine 99.9 4.7E-22 1E-26 180.4 23.9 224 70-306 61-293 (294)
281 PRK05994 O-acetylhomoserine am 99.9 2.4E-21 5.3E-26 183.6 29.7 286 70-385 65-426 (427)
282 PRK15407 lipopolysaccharide bi 99.9 9.1E-21 2E-25 179.9 33.6 323 33-384 26-435 (438)
283 COG0626 MetC Cystathionine bet 99.9 3.8E-21 8.3E-26 175.6 29.3 287 71-386 62-395 (396)
284 PRK06082 4-aminobutyrate amino 99.9 7.3E-21 1.6E-25 181.7 32.6 344 27-388 69-454 (459)
285 PRK07678 aminotransferase; Val 99.9 8.4E-21 1.8E-25 181.2 33.0 345 27-386 44-450 (451)
286 PRK06943 adenosylmethionine--8 99.9 7.7E-21 1.7E-25 181.2 32.1 345 27-387 51-448 (453)
287 PRK05355 3-phosphoserine/phosp 99.9 3.4E-21 7.4E-26 178.8 28.9 315 43-385 13-358 (360)
288 PLN02760 4-aminobutyrate:pyruv 99.9 8E-21 1.7E-25 182.7 32.3 346 27-387 86-493 (504)
289 PRK06173 adenosylmethionine--8 99.9 4.9E-21 1.1E-25 181.3 30.5 342 27-387 41-427 (429)
290 PRK05965 hypothetical protein; 99.9 9.4E-21 2E-25 181.1 32.4 348 27-388 43-450 (459)
291 PRK06105 aminotransferase; Pro 99.9 9.3E-21 2E-25 181.2 31.8 347 27-388 45-452 (460)
292 KOG1360 5-aminolevulinate synt 99.9 4E-21 8.7E-26 168.8 26.5 337 30-387 171-526 (570)
293 PF01041 DegT_DnrJ_EryC1: DegT 99.9 2.4E-21 5.2E-26 181.0 27.0 308 45-380 4-363 (363)
294 PLN02880 tyrosine decarboxylas 99.9 1.1E-20 2.3E-25 181.4 32.0 337 44-389 94-488 (490)
295 PRK06917 hypothetical protein; 99.9 2.3E-20 5E-25 177.8 34.0 352 27-389 28-441 (447)
296 PRK04013 argD acetylornithine/ 99.9 9.6E-21 2.1E-25 175.1 29.8 327 27-387 21-362 (364)
297 PLN02590 probable tyrosine dec 99.9 2.5E-20 5.3E-25 178.9 33.5 336 44-388 142-535 (539)
298 PRK13360 omega amino acid--pyr 99.9 1.7E-20 3.7E-25 178.4 32.3 343 27-386 43-441 (442)
299 PRK05639 4-aminobutyrate amino 99.9 1.8E-20 4E-25 178.6 32.4 346 27-388 50-446 (457)
300 PRK09221 beta alanine--pyruvat 99.9 1.3E-20 2.9E-25 179.3 30.7 344 27-386 46-444 (445)
301 PLN02482 glutamate-1-semialdeh 99.9 2.6E-20 5.6E-25 177.7 32.5 338 27-385 96-473 (474)
302 PRK05630 adenosylmethionine--8 99.9 1.9E-20 4.1E-25 177.1 31.3 338 27-385 37-420 (422)
303 PRK07480 putative aminotransfe 99.9 2.2E-20 4.9E-25 178.2 32.0 347 27-388 47-451 (456)
304 PRK07483 hypothetical protein; 99.9 3.1E-20 6.6E-25 176.8 32.6 351 27-388 27-440 (443)
305 PRK05769 4-aminobutyrate amino 99.9 3.2E-20 6.9E-25 176.7 32.6 341 27-386 51-440 (441)
306 PRK05613 O-acetylhomoserine am 99.9 8.2E-21 1.8E-25 179.4 28.1 289 72-385 69-436 (437)
307 PRK07030 adenosylmethionine--8 99.9 4.5E-20 9.7E-25 176.4 33.1 345 27-387 44-448 (466)
308 PRK07046 aminotransferase; Val 99.9 5.5E-20 1.2E-24 175.2 33.6 333 27-387 72-452 (453)
309 PRK12403 putative aminotransfe 99.9 7.3E-20 1.6E-24 175.0 34.4 345 27-388 51-455 (460)
310 PF00464 SHMT: Serine hydroxym 99.9 4.4E-21 9.5E-26 176.0 24.9 338 16-366 6-381 (399)
311 PRK06938 diaminobutyrate--2-ox 99.9 2.2E-20 4.7E-25 178.5 30.4 347 27-387 60-462 (464)
312 PRK06916 adenosylmethionine--8 99.9 1.8E-20 3.8E-25 179.3 29.7 346 27-388 53-458 (460)
313 cd00611 PSAT_like Phosphoserin 99.9 4.9E-21 1.1E-25 178.2 25.2 314 43-382 9-353 (355)
314 PRK07481 hypothetical protein; 99.9 3.6E-20 7.8E-25 176.8 31.3 345 27-386 39-446 (449)
315 PRK08742 adenosylmethionine--8 99.9 3.5E-20 7.6E-25 177.0 30.8 345 27-387 61-469 (472)
316 TIGR00508 bioA adenosylmethion 99.9 4.4E-20 9.6E-25 175.2 30.8 340 27-385 42-426 (427)
317 PRK00615 glutamate-1-semialdeh 99.9 4.9E-20 1.1E-24 174.3 30.5 338 27-387 50-430 (433)
318 TIGR03531 selenium_SpcS O-phos 99.9 3.6E-20 7.8E-25 173.6 28.9 304 70-383 103-444 (444)
319 PRK12389 glutamate-1-semialdeh 99.9 1.2E-19 2.6E-24 172.6 32.8 334 27-385 50-427 (428)
320 PRK07036 hypothetical protein; 99.9 1.5E-19 3.3E-24 173.0 33.0 346 27-388 48-455 (466)
321 PRK06434 cystathionine gamma-l 99.9 4.7E-20 1E-24 171.4 27.8 280 72-384 64-383 (384)
322 PRK06931 diaminobutyrate--2-ox 99.9 9.6E-20 2.1E-24 174.0 30.6 348 27-388 55-457 (459)
323 KOG0053 Cystathionine beta-lya 99.9 6.3E-20 1.4E-24 165.3 26.8 286 71-386 76-407 (409)
324 KOG1359 Glycine C-acetyltransf 99.9 4.1E-20 8.9E-25 156.3 23.3 331 30-386 67-413 (417)
325 TIGR02618 tyr_phenol_ly tyrosi 99.9 1.1E-18 2.4E-23 161.4 32.5 323 46-386 50-427 (450)
326 TIGR01366 serC_3 phosphoserine 99.9 1.7E-19 3.8E-24 167.8 26.7 315 43-385 13-360 (361)
327 COG2873 MET17 O-acetylhomoseri 99.9 1.5E-19 3.2E-24 158.3 24.3 290 71-385 61-425 (426)
328 PRK06148 hypothetical protein; 99.9 5.7E-19 1.2E-23 183.0 33.0 345 27-387 621-1012(1013)
329 PRK08297 L-lysine aminotransfe 99.9 7.1E-19 1.5E-23 167.5 30.9 364 7-386 15-442 (443)
330 KOG1412 Aspartate aminotransfe 99.9 6.2E-19 1.3E-23 150.3 26.3 358 13-387 11-407 (410)
331 PLN02263 serine decarboxylase 99.9 9.3E-18 2E-22 157.1 36.3 319 46-392 104-450 (470)
332 TIGR00699 GABAtrns_euk 4-amino 99.9 3.6E-19 7.7E-24 168.8 26.4 336 27-383 55-464 (464)
333 PRK13237 tyrosine phenol-lyase 99.9 9.4E-18 2E-22 155.6 34.0 308 63-386 73-434 (460)
334 COG1103 Archaea-specific pyrid 99.9 4.7E-18 1E-22 142.4 28.7 333 31-386 16-381 (382)
335 PRK04311 selenocysteine syntha 99.8 3.1E-18 6.7E-23 162.4 31.1 319 43-384 97-463 (464)
336 COG0161 BioA Adenosylmethionin 99.8 4E-18 8.7E-23 156.8 28.4 347 27-388 41-446 (449)
337 TIGR03799 NOD_PanD_pyr putativ 99.8 8.5E-18 1.8E-22 161.7 31.5 312 52-377 110-517 (522)
338 PRK06149 hypothetical protein; 99.8 5.3E-18 1.2E-22 175.9 32.3 342 27-385 582-970 (972)
339 TIGR03251 LAT_fam L-lysine 6-t 99.8 3.9E-18 8.5E-23 162.3 28.0 338 28-381 36-430 (431)
340 KOG1401 Acetylornithine aminot 99.8 4.3E-18 9.2E-23 151.0 25.3 338 27-387 53-432 (433)
341 PRK05367 glycine dehydrogenase 99.8 3.8E-17 8.2E-22 166.5 33.6 343 30-388 499-878 (954)
342 cd01494 AAT_I Aspartate aminot 99.8 1.3E-18 2.8E-23 144.9 17.8 166 71-247 3-170 (170)
343 TIGR01365 serC_2 phosphoserine 99.8 1.7E-17 3.7E-22 153.2 26.1 293 66-384 33-372 (374)
344 TIGR00474 selA seryl-tRNA(sec) 99.8 7.3E-17 1.6E-21 152.7 31.0 316 43-379 92-453 (454)
345 KOG1411 Aspartate aminotransfe 99.8 6.1E-18 1.3E-22 146.3 20.7 351 16-382 36-422 (427)
346 PRK15029 arginine decarboxylas 99.8 2.8E-16 6.2E-21 155.3 35.0 230 72-308 205-464 (755)
347 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 6.3E-18 1.4E-22 155.9 21.9 235 73-314 67-326 (417)
348 PRK12566 glycine dehydrogenase 99.8 1.2E-16 2.6E-21 159.2 31.9 340 31-387 501-878 (954)
349 COG0076 GadB Glutamate decarbo 99.8 5E-17 1.1E-21 153.6 27.9 296 43-349 73-401 (460)
350 PRK06209 glutamate-1-semialdeh 99.8 5.2E-17 1.1E-21 154.6 27.6 330 27-388 45-408 (431)
351 PLN02974 adenosylmethionine-8- 99.8 1.6E-16 3.5E-21 159.3 31.9 341 31-383 366-816 (817)
352 KOG1402 Ornithine aminotransfe 99.8 1.5E-17 3.2E-22 143.1 20.5 334 28-384 57-426 (427)
353 PF04864 Alliinase_C: Allinase 99.8 3.3E-18 7.1E-23 149.4 16.0 283 71-381 46-361 (363)
354 TIGR00461 gcvP glycine dehydro 99.8 1.8E-15 3.9E-20 151.8 33.2 315 61-388 516-870 (939)
355 PLN02452 phosphoserine transam 99.8 8E-16 1.7E-20 142.2 28.6 325 32-385 8-363 (365)
356 KOG1404 Alanine-glyoxylate ami 99.8 4.5E-16 9.8E-21 137.3 25.3 337 27-379 47-432 (442)
357 PF01212 Beta_elim_lyase: Beta 99.8 3.3E-18 7.1E-23 152.8 11.4 249 44-311 7-273 (290)
358 KOG1358 Serine palmitoyltransf 99.8 1.8E-16 3.9E-21 139.6 20.5 338 27-386 91-466 (467)
359 PF00202 Aminotran_3: Aminotra 99.7 8.5E-17 1.8E-21 148.4 14.3 270 27-307 13-315 (339)
360 PF00282 Pyridoxal_deC: Pyrido 99.7 1.4E-15 3E-20 141.4 22.3 273 44-326 51-372 (373)
361 PRK15400 lysine decarboxylase 99.7 3.1E-14 6.6E-19 139.5 32.5 298 72-385 195-559 (714)
362 KOG1357 Serine palmitoyltransf 99.7 8.2E-16 1.8E-20 137.9 19.5 315 45-385 157-502 (519)
363 PLN02414 glycine dehydrogenase 99.7 1.1E-14 2.5E-19 148.0 30.1 329 20-381 92-465 (993)
364 PRK13578 ornithine decarboxyla 99.7 5.9E-14 1.3E-18 137.6 33.2 168 72-247 174-369 (720)
365 PRK15399 lysine decarboxylase 99.7 1.5E-13 3.3E-18 134.6 35.6 297 72-385 195-559 (713)
366 PRK12462 phosphoserine aminotr 99.7 2.7E-14 5.8E-19 130.6 28.2 323 32-384 5-361 (364)
367 COG3844 Kynureninase [Amino ac 99.7 2.7E-14 5.9E-19 123.2 26.0 348 16-387 16-404 (407)
368 PRK05367 glycine dehydrogenase 99.7 4E-14 8.6E-19 144.6 29.3 304 44-380 90-437 (954)
369 TIGR02617 tnaA_trp_ase tryptop 99.7 2.3E-13 4.9E-18 125.1 29.0 334 31-385 42-441 (467)
370 TIGR03811 tyr_de_CO2_Ent tyros 99.7 5.8E-13 1.2E-17 129.6 33.6 341 43-389 94-606 (608)
371 COG1982 LdcC Arginine/lysine/o 99.6 2.1E-13 4.6E-18 128.4 26.1 299 76-386 74-405 (557)
372 PF06838 Met_gamma_lyase: Meth 99.6 9.5E-13 2.1E-17 116.3 23.0 262 46-327 27-318 (403)
373 COG1003 GcvP Glycine cleavage 99.6 4.5E-12 9.8E-17 113.9 26.2 344 28-389 64-451 (496)
374 KOG2467 Glycine/serine hydroxy 99.5 1.3E-11 2.8E-16 108.4 25.6 361 13-385 23-426 (477)
375 TIGR00461 gcvP glycine dehydro 99.5 5.6E-11 1.2E-15 119.9 30.0 328 20-380 53-426 (939)
376 KOG1383 Glutamate decarboxylas 99.4 1.1E-10 2.4E-15 106.0 25.5 304 68-388 116-449 (491)
377 KOG1403 Predicted alanine-glyo 99.4 2.5E-11 5.3E-16 103.9 18.2 330 44-388 62-440 (452)
378 KOG0628 Aromatic-L-amino-acid/ 99.4 1.3E-10 2.7E-15 105.4 22.7 319 64-389 105-475 (511)
379 COG1921 SelA Selenocysteine sy 99.4 2.8E-10 6E-15 103.0 23.2 221 44-282 39-268 (395)
380 PF02347 GDC-P: Glycine cleava 99.4 1.5E-10 3.3E-15 107.3 21.6 289 61-379 97-429 (429)
381 COG4100 Cystathionine beta-lya 99.3 6.9E-10 1.5E-14 95.2 20.9 265 46-327 38-329 (416)
382 KOG0629 Glutamate decarboxylas 99.2 2.2E-09 4.7E-14 96.4 20.9 310 61-382 130-506 (510)
383 PF03841 SelA: L-seryl-tRNA se 99.2 2.5E-11 5.5E-16 108.8 7.5 223 43-282 17-258 (367)
384 PLN02994 1-aminocyclopropane-1 99.2 2.3E-10 5E-15 91.9 12.1 90 30-125 43-153 (153)
385 COG0403 GcvP Glycine cleavage 99.2 6.9E-08 1.5E-12 87.4 28.0 337 19-382 63-447 (450)
386 COG1932 SerC Phosphoserine ami 99.1 5E-08 1.1E-12 86.8 22.9 328 31-385 5-363 (365)
387 PF05889 SLA_LP_auto_ag: Solub 99.1 1.5E-08 3.3E-13 91.9 19.9 301 72-384 56-389 (389)
388 COG3033 TnaA Tryptophanase [Am 99.0 1.2E-06 2.7E-11 77.5 27.3 323 44-385 60-444 (471)
389 KOG3846 L-kynurenine hydrolase 98.9 1.1E-06 2.3E-11 76.2 23.4 340 27-387 63-463 (465)
390 PRK12566 glycine dehydrogenase 98.9 1.2E-06 2.5E-11 88.8 26.5 324 20-380 68-439 (954)
391 KOG1405 4-aminobutyrate aminot 98.8 3.6E-07 7.8E-12 80.5 15.8 215 151-385 254-483 (484)
392 KOG2040 Glycine dehydrogenase 98.7 7.6E-06 1.6E-10 77.8 21.7 339 30-387 539-920 (1001)
393 KOG3843 Predicted serine hydro 98.1 2.6E-05 5.7E-10 66.3 10.5 293 90-389 77-406 (432)
394 KOG2790 Phosphoserine aminotra 97.6 0.0088 1.9E-07 51.9 17.1 329 30-385 6-368 (370)
395 PLN02672 methionine S-methyltr 97.5 0.0033 7.2E-08 65.8 16.0 242 18-275 371-641 (1082)
396 KOG2040 Glycine dehydrogenase 97.4 0.058 1.2E-06 52.4 20.9 268 83-380 174-478 (1001)
397 CHL00200 trpA tryptophan synth 90.6 12 0.00025 33.3 14.0 163 22-202 35-207 (263)
398 TIGR00262 trpA tryptophan synt 90.4 12 0.00026 33.1 15.5 164 22-202 30-203 (256)
399 COG0159 TrpA Tryptophan syntha 88.7 16 0.00036 32.2 16.4 156 24-196 39-203 (265)
400 PLN02591 tryptophan synthase 83.7 30 0.00065 30.5 14.9 163 22-202 22-194 (250)
401 COG2102 Predicted ATPases of P 83.4 17 0.00037 31.0 9.9 101 91-201 3-116 (223)
402 PF05368 NmrA: NmrA-like famil 82.7 18 0.00038 31.3 10.5 91 98-202 8-99 (233)
403 COG1105 FruK Fructose-1-phosph 81.2 15 0.00033 33.3 9.4 61 146-209 107-171 (310)
404 COG1184 GCD2 Translation initi 71.4 66 0.0014 29.1 10.6 103 88-202 118-226 (301)
405 KOG0630 Predicted pyridoxal-de 68.2 1.2E+02 0.0026 29.4 12.3 85 116-204 234-330 (838)
406 PF00290 Trp_syntA: Tryptophan 68.2 87 0.0019 27.8 14.2 163 21-201 29-202 (259)
407 TIGR03573 WbuX N-acetyl sugar 67.9 57 0.0012 30.3 10.0 109 89-213 60-176 (343)
408 KOG2741 Dimeric dihydrodiol de 66.6 53 0.0012 30.2 9.0 74 121-207 59-132 (351)
409 PRK13125 trpA tryptophan synth 66.3 91 0.002 27.3 15.7 145 16-184 17-171 (244)
410 smart00642 Aamy Alpha-amylase 63.5 25 0.00054 28.8 6.0 28 182-209 68-95 (166)
411 PF01408 GFO_IDH_MocA: Oxidore 63.3 27 0.00059 26.3 6.0 69 122-202 50-118 (120)
412 TIGR02990 ectoine_eutA ectoine 59.1 1.2E+02 0.0027 26.4 10.7 97 96-202 105-211 (239)
413 COG0373 HemA Glutamyl-tRNA red 58.4 1.7E+02 0.0037 28.0 11.2 109 76-205 164-274 (414)
414 COG0031 CysK Cysteine synthase 56.0 1.3E+02 0.0029 27.3 9.6 101 73-176 41-148 (300)
415 PRK10595 SOS cell division inh 55.5 1.1E+02 0.0025 24.9 11.4 84 109-201 52-138 (164)
416 COG0296 GlgB 1,4-alpha-glucan 54.9 18 0.0004 36.2 4.5 36 179-214 209-244 (628)
417 PRK05678 succinyl-CoA syntheta 54.6 57 0.0012 29.5 7.2 76 117-206 48-125 (291)
418 TIGR00623 sula cell division i 54.5 1.2E+02 0.0026 24.8 11.1 83 109-201 56-142 (168)
419 TIGR01470 cysG_Nterm siroheme 54.4 1.4E+02 0.0029 25.4 11.1 96 87-205 7-103 (205)
420 PRK03892 ribonuclease P protei 53.7 1.4E+02 0.003 25.4 10.0 104 91-202 62-171 (216)
421 PF02662 FlpD: Methyl-viologen 52.4 68 0.0015 24.7 6.5 47 149-197 39-90 (124)
422 PF01902 ATP_bind_4: ATP-bindi 51.8 1.2E+02 0.0025 26.2 8.4 99 92-201 4-115 (218)
423 PRK08057 cobalt-precorrin-6x r 50.8 99 0.0021 27.2 8.0 94 90-202 3-97 (248)
424 PRK10076 pyruvate formate lyas 50.1 1.5E+02 0.0033 25.4 8.9 22 181-202 190-211 (213)
425 COG0505 CarA Carbamoylphosphat 49.7 55 0.0012 30.2 6.2 55 112-177 178-234 (368)
426 COG0352 ThiE Thiamine monophos 49.6 43 0.00094 28.6 5.4 88 152-247 24-113 (211)
427 cd00951 KDGDH 5-dehydro-4-deox 49.5 82 0.0018 28.4 7.6 59 142-202 11-74 (289)
428 TIGR00290 MJ0570_dom MJ0570-re 48.4 1.8E+02 0.0039 25.1 9.3 99 92-201 4-115 (223)
429 PRK06372 translation initiatio 47.9 2E+02 0.0043 25.4 10.9 100 89-202 86-190 (253)
430 PRK10494 hypothetical protein; 47.2 50 0.0011 29.3 5.7 69 76-145 140-211 (259)
431 PRK03620 5-dehydro-4-deoxygluc 47.1 90 0.002 28.4 7.5 68 133-202 9-81 (303)
432 PF13460 NAD_binding_10: NADH( 46.6 1.6E+02 0.0034 23.9 9.5 89 93-198 2-90 (183)
433 TIGR03590 PseG pseudaminic aci 46.4 2E+02 0.0044 25.7 9.6 82 111-205 29-112 (279)
434 TIGR03249 KdgD 5-dehydro-4-deo 46.3 1E+02 0.0022 28.0 7.6 61 134-196 8-70 (296)
435 COG0616 SppA Periplasmic serin 45.8 1E+02 0.0022 28.2 7.6 56 151-207 81-140 (317)
436 cd06568 GH20_SpHex_like A subg 45.6 54 0.0012 30.3 5.8 69 128-202 25-93 (329)
437 PF08543 Phos_pyr_kin: Phospho 45.3 48 0.0011 29.0 5.3 50 151-207 44-96 (246)
438 KOG0622 Ornithine decarboxylas 45.2 2.8E+02 0.0061 26.4 13.6 125 68-201 61-210 (448)
439 PRK02261 methylaspartate mutas 45.1 1.5E+02 0.0033 23.3 8.4 57 128-196 25-81 (137)
440 PRK03170 dihydrodipicolinate s 44.7 97 0.0021 27.9 7.3 53 142-196 12-66 (292)
441 TIGR02313 HpaI-NOT-DapA 2,4-di 44.3 1.1E+02 0.0023 27.8 7.5 58 142-201 11-73 (294)
442 PRK11070 ssDNA exonuclease Rec 43.8 3.4E+02 0.0073 27.4 11.3 102 93-207 50-161 (575)
443 TIGR01019 sucCoAalpha succinyl 43.4 1E+02 0.0022 27.8 7.1 77 116-206 45-123 (286)
444 COG2515 Acd 1-aminocyclopropan 43.2 2.6E+02 0.0056 25.4 13.1 107 89-195 63-177 (323)
445 PF02571 CbiJ: Precorrin-6x re 42.9 1.2E+02 0.0027 26.7 7.4 95 91-202 2-98 (249)
446 TIGR00683 nanA N-acetylneurami 42.9 1.2E+02 0.0026 27.4 7.6 53 142-196 11-66 (290)
447 cd00408 DHDPS-like Dihydrodipi 42.8 86 0.0019 28.0 6.7 53 142-196 8-62 (281)
448 PLN02417 dihydrodipicolinate s 42.6 98 0.0021 27.8 6.9 59 142-202 12-75 (280)
449 cd01422 MGS Methylglyoxal synt 41.9 1.5E+02 0.0033 22.4 9.0 79 113-202 27-106 (115)
450 PRK04147 N-acetylneuraminate l 41.4 1.2E+02 0.0025 27.5 7.3 53 142-196 14-69 (293)
451 cd02742 GH20_hexosaminidase Be 41.3 64 0.0014 29.3 5.6 68 128-202 23-90 (303)
452 TIGR00097 HMP-P_kinase phospho 40.6 70 0.0015 28.1 5.7 49 151-206 51-103 (254)
453 COG0329 DapA Dihydrodipicolina 40.4 87 0.0019 28.5 6.3 59 142-202 15-78 (299)
454 PF02310 B12-binding: B12 bind 40.4 1.6E+02 0.0034 22.1 7.2 66 128-205 22-89 (121)
455 PF12804 NTP_transf_3: MobA-li 40.4 1.4E+02 0.0031 23.6 7.1 92 97-196 22-114 (160)
456 TIGR00715 precor6x_red precorr 40.2 1.2E+02 0.0026 26.9 6.9 96 91-202 2-97 (256)
457 PRK13111 trpA tryptophan synth 39.9 2.7E+02 0.0058 24.7 15.8 163 22-202 32-205 (258)
458 COG1087 GalE UDP-glucose 4-epi 39.8 1.4E+02 0.003 27.2 7.1 103 91-201 2-113 (329)
459 TIGR00524 eIF-2B_rel eIF-2B al 39.6 3E+02 0.0064 25.1 11.1 105 88-203 117-237 (303)
460 PF12138 Spherulin4: Spherulat 39.4 1.6E+02 0.0034 26.1 7.5 50 152-201 18-71 (253)
461 COG2870 RfaE ADP-heptose synth 39.2 1.6E+02 0.0034 28.0 7.5 106 96-207 73-181 (467)
462 PRK08535 translation initiatio 37.5 3.2E+02 0.007 24.9 11.0 103 88-203 119-228 (310)
463 PLN03244 alpha-amylase; Provis 37.4 53 0.0012 34.0 4.6 38 175-212 432-469 (872)
464 PRK08335 translation initiatio 37.3 3.1E+02 0.0067 24.6 11.3 102 88-202 108-216 (275)
465 PRK04296 thymidine kinase; Pro 37.1 2.1E+02 0.0046 23.8 7.7 97 98-207 16-116 (190)
466 cd02067 B12-binding B12 bindin 36.9 1.8E+02 0.0039 21.8 8.2 57 128-196 21-77 (119)
467 COG1435 Tdk Thymidine kinase [ 36.6 1.8E+02 0.004 24.5 6.9 96 96-203 15-116 (201)
468 cd01169 HMPP_kinase 4-amino-5- 36.5 89 0.0019 27.0 5.7 49 151-206 52-104 (242)
469 TIGR02012 tigrfam_recA protein 35.9 1.7E+02 0.0038 26.9 7.4 42 313-355 247-288 (321)
470 TIGR00289 conserved hypothetic 35.8 2.9E+02 0.0063 23.9 8.8 100 92-201 4-115 (222)
471 cd00950 DHDPS Dihydrodipicolin 35.5 1.7E+02 0.0037 26.1 7.4 53 142-196 11-65 (284)
472 PF04392 ABC_sub_bind: ABC tra 35.3 79 0.0017 28.5 5.2 144 46-202 14-165 (294)
473 TIGR00160 MGSA methylglyoxal s 35.3 2.3E+02 0.0049 22.5 7.0 58 153-213 63-120 (143)
474 COG0826 Collagenase and relate 35.0 1.2E+02 0.0027 28.2 6.4 50 151-202 15-67 (347)
475 PF04413 Glycos_transf_N: 3-De 34.5 1.7E+02 0.0036 24.4 6.6 84 101-202 36-123 (186)
476 PF14258 DUF4350: Domain of un 34.3 1.4E+02 0.0031 19.9 6.2 62 124-203 8-70 (70)
477 PF00701 DHDPS: Dihydrodipicol 33.4 1.3E+02 0.0027 27.1 6.2 58 142-202 12-75 (289)
478 smart00851 MGS MGS-like domain 33.1 1.8E+02 0.0039 20.6 7.4 83 106-201 6-89 (90)
479 KOG4589 Cell division protein 33.1 3E+02 0.0065 23.2 7.8 41 151-195 121-165 (232)
480 COG0673 MviM Predicted dehydro 32.8 1.9E+02 0.0041 26.5 7.5 27 181-207 102-128 (342)
481 PF01008 IF-2B: Initiation fac 32.8 2.3E+02 0.0051 25.2 7.8 106 87-204 105-217 (282)
482 TIGR02370 pyl_corrinoid methyl 32.8 3E+02 0.0065 23.1 8.2 57 128-196 106-162 (197)
483 TIGR00511 ribulose_e2b2 ribose 32.2 3.9E+02 0.0085 24.3 10.6 103 88-203 114-223 (301)
484 PRK08176 pdxK pyridoxal-pyrido 32.2 2.7E+02 0.0059 24.9 8.1 50 151-207 69-129 (281)
485 cd00954 NAL N-Acetylneuraminic 32.1 2.2E+02 0.0048 25.6 7.6 59 142-202 11-75 (288)
486 PRK10206 putative oxidoreducta 32.0 1.8E+02 0.0038 27.0 7.1 21 182-202 100-120 (344)
487 cd02071 MM_CoA_mut_B12_BD meth 31.9 2.3E+02 0.005 21.5 7.8 57 128-196 21-77 (122)
488 KOG3974 Predicted sugar kinase 31.9 2.7E+02 0.0058 24.7 7.3 78 124-210 67-145 (306)
489 KOG1465 Translation initiation 31.8 4E+02 0.0086 24.2 10.9 131 88-234 161-297 (353)
490 PRK11823 DNA repair protein Ra 31.8 4.9E+02 0.011 25.3 10.5 111 86-202 76-203 (446)
491 PF13684 Dak1_2: Dihydroxyacet 31.8 1.7E+02 0.0037 26.8 6.7 79 115-204 98-176 (313)
492 PF00128 Alpha-amylase: Alpha 31.7 55 0.0012 29.4 3.6 31 182-212 50-80 (316)
493 PF00248 Aldo_ket_red: Aldo/ke 31.7 3.4E+02 0.0074 24.0 8.8 150 45-208 16-192 (283)
494 PF02603 Hpr_kinase_N: HPr Ser 31.6 90 0.0019 24.1 4.3 40 153-203 72-111 (127)
495 PRK09354 recA recombinase A; P 31.4 3E+02 0.0065 25.7 8.2 112 86-202 56-192 (349)
496 TIGR00649 MG423 conserved hypo 31.4 4.3E+02 0.0093 25.3 9.8 97 90-198 287-401 (422)
497 PF04002 RadC: RadC-like JAB d 31.1 1.2E+02 0.0025 23.4 4.8 45 153-200 55-103 (123)
498 cd06570 GH20_chitobiase-like_1 30.9 1.1E+02 0.0024 27.9 5.4 25 178-202 62-86 (311)
499 KOG0384 Chromodomain-helicase 30.9 1.7E+02 0.0037 32.0 7.1 86 25-128 695-786 (1373)
500 TIGR00674 dapA dihydrodipicoli 30.9 1.9E+02 0.004 26.0 6.8 53 142-196 9-63 (285)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-55 Score=409.37 Aligned_cols=349 Identities=31% Similarity=0.514 Sum_probs=315.1
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCc-EEEeCChHHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSS-VMVTAGANQAFVNIV 106 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~-i~~~~g~t~a~~~~~ 106 (400)
.++|+|+.|+|+++.|+.+++++.+++.++.. .|.+..|.+++|+++++++.+++|+ .+++ |++|+|+++|+..++
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~ 106 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAF 106 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHH
Confidence 47999999999999999999999999987533 6779999999999999999999874 4555 999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC--CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
.++.+|||+|++++|.|+.+...++..|++++.+ |++. ++|.+|.+.|++.+++++ |+|++++||||||.+++.+
T Consensus 107 ~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v-~l~~~~~~f~~d~~~l~~~i~~kt--k~i~ln~P~NPTGav~~~~ 183 (393)
T COG0436 107 LALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPV-PLDEEENGFKPDLEDLEAAITPKT--KAIILNSPNNPTGAVYSKE 183 (393)
T ss_pred HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEE-eCCcCccCCcCCHHHHHhhcCccc--eEEEEeCCCCCcCcCCCHH
Confidence 9999999999999999999999999999999999 8754 589999999999999876 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCC-Ccccc--C--CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGR-KHCCV--E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~~--~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
++++|+++|++||+++|+||+|..+.+++. ..... . .++.+.+.|+||.++++|||+||+++++ +++++.+.+
T Consensus 184 ~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~--~~l~~~~~~ 261 (393)
T COG0436 184 ELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP--EELIAALRK 261 (393)
T ss_pred HHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh--HHHHHHHHH
Confidence 999999999999999999999999999874 22222 2 3679999999999999999999999886 688888888
Q ss_pred hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCCceEEEeeCCCCCCCHHHH
Q 015768 260 VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 336 (400)
......++++.+.|.++..+|+... ++...+++.++++++.+.+.|.+.+++.+.. |.+++|+|++++.. .+..++
T Consensus 262 ~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~-~d~~~f 340 (393)
T COG0436 262 LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL-LDSEEF 340 (393)
T ss_pred HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-CCHHHH
Confidence 8888888999999999999999753 4777888899999999999999998767776 88899999999876 589999
Q ss_pred HHHHHHhcCeEEeCCCccCCC---CeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 337 VRWLAHRHGVVVIPGGACGCR---GHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~~~~---~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+.+|++++||.+.||..|+.+ +++|++++. +.+.++++++++.++++.+
T Consensus 341 ~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~-~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 341 AKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT-SEETLEEALRRLARFLAEY 392 (393)
T ss_pred HHHHHHhCCEEEecccccCCCCCCCeEEEEEec-CHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999864 899999997 6799999999999998764
No 2
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=4.1e-51 Score=387.12 Aligned_cols=370 Identities=22% Similarity=0.405 Sum_probs=321.3
Q ss_pred hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
+++++|+.....+.+..+.+.. .+++.++|+.|.+++++++.+.+++.+.+.+. ...|++..|.+++|+++++++.+.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~ 107 (413)
T PLN00175 30 LQVAKRLEKFKTTIFTQMSSLA-IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKD 107 (413)
T ss_pred cchhHHhhcCCCCHHHHHHHHh-hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHH
Confidence 4578888887777787776664 44689999999999988899999998888763 567999999999999999999988
Q ss_pred cCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 85 NKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 85 ~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
+|+ +++ +|++|+|+++++..++.++++|||+|++++|+|+.+...++..|++++.+ +.+++++.++++.+++.+.+
T Consensus 108 ~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~l~~~~~~ 186 (413)
T PLN00175 108 TGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTV-TLRPPDFAVPEDELKAAFTS 186 (413)
T ss_pred hCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-ECCcccCCCCHHHHHHhcCc
Confidence 774 465 79999999999999999999999999999999999999999999999999 88766678899999999876
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCC
Q 015768 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~ 237 (400)
++ |+|++++|+||||.+++.+++++|+++|++|++++|+||+|..+.+++.... .. ..+++++++||||.+|++
T Consensus 187 ~~--k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 187 KT--RAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred Cc--eEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 65 9999999999999999999999999999999999999999999887643211 11 246789999999999999
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC
Q 015768 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 317 (400)
Q Consensus 238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 317 (400)
|+|+||++++ +++++.+........++++.+.|.++..+|+..+.++++.++.++++++.+.+.|++.+ +.+..|.
T Consensus 265 G~RiG~~v~~---~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~ 340 (413)
T PLN00175 265 GWKIGWAIAP---PHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-FKVYPSS 340 (413)
T ss_pred chheeeeEeC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCC
Confidence 9999999999 78989888877666788999999999999987667888999999999999999999986 4777888
Q ss_pred CceEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 318 GAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 318 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+++|+|++++. ...+..+++.++++++||.+.||..|+ ..+++||+++. +++++++++++|+++++
T Consensus 341 g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 341 GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-DEETLRAAVERMKTKLK 412 (413)
T ss_pred eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 89999999853 222467899988878899999999874 24699999996 89999999999998875
No 3
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.1e-50 Score=383.03 Aligned_cols=370 Identities=21% Similarity=0.315 Sum_probs=305.5
Q ss_pred hHHHHhhhcCchHHHHHHHH----HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH
Q 015768 6 KLAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81 (400)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l 81 (400)
.+++|+.......+..+.+. .+.+++.++|+.|++++++++.+.+++.+.+.......|++..|.+++|+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 81 (388)
T PRK07366 2 QFAQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWY 81 (388)
T ss_pred chhhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHH
Confidence 35777765555555444333 34578899999999999989999999998876554667988899999999999999
Q ss_pred HhhcC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHH
Q 015768 82 NQENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEK 157 (400)
Q Consensus 82 ~~~~~--~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~ 157 (400)
.+.+| ++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+ |.+++ ++.+|++++++
T Consensus 82 ~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~ 160 (388)
T PRK07366 82 EQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPM-PLRAENDFLPVFADIPT 160 (388)
T ss_pred HHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ECCCccCCCCCHHHHHH
Confidence 88876 5677 69999999999999999999999999999999999999999999999999 88754 57788888887
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-cc---cc--CCCcEEEEeccc
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HC---CV--EGDHVVNLFSFS 231 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~---~~--~~~~~i~~~s~s 231 (400)
.+..++ |++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++.. .. .. ..+++++++|||
T Consensus 161 ~~~~~~--k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 238 (388)
T PRK07366 161 EVLAQA--RLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLS 238 (388)
T ss_pred hhcccc--eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecc
Confidence 776554 99999999999999999999999999999999999999999999876532 11 11 124678999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|.+|++|+|+||++++ +++++++.........+.....+.++..++....+++++.++.++++++.+.+.|++++.
T Consensus 239 K~~g~~GlRiG~~v~~---~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~- 314 (388)
T PRK07366 239 KSYNMGGFRIGFAIGN---AQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGW- 314 (388)
T ss_pred cccCCcchhheehcCC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence 9999999999999988 889998888776555554444445555566544678889999999999999999998864
Q ss_pred cccCCCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
.+..|.+++|+|++++... .+..+++.++++++||.+.||..|+. ++++||+++. +++++++++++|++++
T Consensus 315 ~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 315 PVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-DPDILEEAVERIAAFL 388 (388)
T ss_pred cccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC-CHHHHHHHHHHHHHhC
Confidence 6667888999999998642 24677888887789999999998863 5899999986 8999999999998763
No 4
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-50 Score=377.78 Aligned_cols=376 Identities=35% Similarity=0.675 Sum_probs=324.2
Q ss_pred hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
|++++|+.....+.+..+....+..++.++|+.|.+++++|+.+.+++.+.+.......|++..|.+++++++++++.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~ 81 (389)
T PRK05957 2 TQFTSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQD 81 (389)
T ss_pred chhhHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 67899987777777766776777777899999999999889999999998876554567988899999999999999988
Q ss_pred cCCC---CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 85 NKLY---KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 85 ~~~~---~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
+|++ +++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.+ |.++ ++.+|++.+++.+++
T Consensus 82 ~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~ 159 (389)
T PRK05957 82 NGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILV-PTDD-NYQLQPEAIEQAITP 159 (389)
T ss_pred hCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEe-ecCC-CCCcCHHHHHHhcCc
Confidence 8763 6789999999999999999999999999999999999988889999999999 8763 457899999999876
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-----ccCCCcEEEEeccccccCC
Q 015768 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-----CVEGDHVVNLFSFSKAYGM 236 (400)
Q Consensus 162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~ 236 (400)
++ |+|++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++.+.. .....++++++|+||.+|+
T Consensus 160 ~~--klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 237 (389)
T PRK05957 160 KT--RAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF 237 (389)
T ss_pred Cc--eEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccC
Confidence 55 9999999999999999999999999999999999999999999887643211 1234578999999999999
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-CcccC
Q 015768 237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAVKG 315 (400)
Q Consensus 237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~ 315 (400)
+|+|+||++.+ +++++++.........+++.+.|.++..+|+.+.+++++..+.++++++.+.+.|++++. ..+..
T Consensus 238 ~GlRiG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~ 314 (389)
T PRK05957 238 ASWRIGYMVIP---IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHP 314 (389)
T ss_pred ccceeEEEecC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC
Confidence 99999999998 789999988776556677889999999999876677888888899999999999998765 36677
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+.+++|+|++++.. .+..+++.++++++||.+.||..|+. ++++||+++..+.+++++++++|.+.++++.+
T Consensus 315 ~~gg~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 315 ANGAFYCFLKVNTD-LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred CCeeEEEEEeCCCC-CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence 88899999999754 36788999988779999999998864 46999999877899999999999999988754
No 5
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-50 Score=378.48 Aligned_cols=368 Identities=22% Similarity=0.356 Sum_probs=315.4
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~ 86 (400)
+++++.......+..+.+.....++.++|+.|++++++++.+++++.+..... ...|++..|.+++|+++++++.+.+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~ 84 (384)
T PRK06348 6 LAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEIIKYYSKNYD 84 (384)
T ss_pred HHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 68888776677777777776666789999999999988888888776655443 56798899999999999999987764
Q ss_pred --CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCC
Q 015768 87 --LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKP 163 (400)
Q Consensus 87 --~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~ 163 (400)
+++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.+ |.+ ++++.+|++.+++.+++++
T Consensus 85 ~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~ 163 (384)
T PRK06348 85 LSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIIL-ETYEEDGFQINVKKLEALITSKT 163 (384)
T ss_pred CCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEe-cCCcCcCCcCCHHHHHHhhCcCc
Confidence 568999999999999999999999999999999999999999999999999988 764 4577889999999887654
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cccC--CCcEEEEeccccccCCCcc
Q 015768 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVE--GDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~--~~~~i~~~s~sK~~g~~g~ 239 (400)
++|++++|+||||.+++.+++++|.++|+++++++|+||+|.++.+++... .... .+++++++||||.+|++|+
T Consensus 164 --~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl 241 (384)
T PRK06348 164 --KAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGW 241 (384)
T ss_pred --cEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccc
Confidence 999999999999999999999999999999999999999999988764221 1122 5689999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 319 (400)
|+||++++ +++++.+........++++.+.|.++..++...+++.++.++.++++++.+.+.|+.++...+..|+++
T Consensus 242 RiG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg 318 (384)
T PRK06348 242 RIGYVIAP---DYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGS 318 (384)
T ss_pred cceeeecC---HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCee
Confidence 99999998 788888888776667788999999999999875677788888899999999999998766677888889
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
+|+|++++....+..+++..+++++||.+.||..|+. ++++|++++. +++++++++++|++.
T Consensus 319 ~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 382 (384)
T PRK06348 319 IYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTV-GIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecC-CHHHHHHHHHHHHhh
Confidence 9999999753346888998887778999999999864 5799999985 899999999998653
No 6
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-51 Score=355.46 Aligned_cols=357 Identities=23% Similarity=0.351 Sum_probs=317.9
Q ss_pred HHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChH
Q 015768 22 IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN 99 (400)
Q Consensus 22 ~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t 99 (400)
.++.+.+..|+++|.+++++|+.||++++|+.+..+++ ..+| +.+.+++.+++.+|.+++++ ++++.|++++|..
T Consensus 17 KWd~~~g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY--~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VV 93 (388)
T COG1168 17 KWDAHPGNEDVLPMWVADMDFPTPPEIIEALRERVDHG-VFGY--PYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVV 93 (388)
T ss_pred eccccCCCCCcceeeeecccCCCCHHHHHHHHHHHhcC-CCCC--CCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcch
Confidence 34444577999999999999999999999999999986 5556 37788999999999999985 5689999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC--CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (400)
Q Consensus 100 ~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt 177 (400)
-++..+++++++|||.|++..|.|+++....+..|-+++.. |+.. +.+.+|.++|++.+.+.. +|+.++||||||+
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~-pL~~~~~~y~iD~~~LE~~~~~~~-vkl~iLCnPHNP~ 171 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIEN-PLVEDDGRYEIDFDALEKAFVDER-VKLFILCNPHNPT 171 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEec-cccccCCcEEecHHHHHHHHhcCC-ccEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999988 8753 347889999999998553 6999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc------CCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 251 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~------~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~ 251 (400)
|.+++.++|++|.++|.+||+.+|+||.|..+.+.+.++... ..++.+.+.|.||.|+++|+.+++++.+| +
T Consensus 172 Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n--~ 249 (388)
T COG1168 172 GRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISN--R 249 (388)
T ss_pred CccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecC--H
Confidence 999999999999999999999999999999999988554332 24778899999999999999999988887 6
Q ss_pred HHHHHH-HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCC
Q 015768 252 GFATQL-LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEK 329 (400)
Q Consensus 252 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~ 329 (400)
++..+. +........++|.++..|...+++++.+|+++..+-++.|++++.+.|++ +|++++..|++.+.+|+++...
T Consensus 250 ~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l 329 (388)
T COG1168 250 ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCREL 329 (388)
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeecccc
Confidence 664443 34444567788999999999999999999999999999999999999998 6889999999999999999988
Q ss_pred CCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 330 HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 330 ~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
..+..++.++++++.+|.+.+|..|+ +.+++|+++++ ++..+++++++|+.++++.
T Consensus 330 ~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac-pr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 330 GLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC-PRAILEEALERLKRALKKR 387 (388)
T ss_pred CCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC-CHHHHHHHHHHHHHHHhcc
Confidence 88888999999999999999999998 46899999997 9999999999999998764
No 7
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-50 Score=379.99 Aligned_cols=367 Identities=22% Similarity=0.372 Sum_probs=312.0
Q ss_pred hhHHHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
|++++|+.......+..+.+.. ..++++++|+.|++++++++.+.+++.+.+.+....+|+ ..|..++|++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~ 81 (399)
T PRK07681 3 YTLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEY 81 (399)
T ss_pred ccHhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHH
Confidence 4567777765555555555543 346789999999999988899999998887654344453 57999999999999
Q ss_pred HHhhcCC--CC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHH
Q 015768 81 LNQENKL--YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE 156 (400)
Q Consensus 81 l~~~~~~--~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~ 156 (400)
+.+.+|+ ++ ++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ |.+++ ++.+|++.++
T Consensus 82 ~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~ 160 (399)
T PRK07681 82 YNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYM-PLKKENDFLPDLELIP 160 (399)
T ss_pred HHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEE-ecCCCCCCcCCHHHHH
Confidence 9988764 56 799999999999999999999999999999999999999999999999999 88754 5788999998
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccc
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFS 231 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~s 231 (400)
+.+.+++ ++|++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++..... . ..+++++++|||
T Consensus 161 ~~~~~~~--k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 238 (399)
T PRK07681 161 EEIADKA--KMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLS 238 (399)
T ss_pred Hhccccc--eEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecc
Confidence 8886554 99999999999999999999999999999999999999999999876532211 1 235789999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|.+|++|+|+||++.+ +++++++........++++.+.+.++..+|+.+.+++++.++.++++++.+.+.|++.+ +
T Consensus 239 K~~~~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 314 (399)
T PRK07681 239 KSYSLAGSRIGYMIGN---EEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTFG-W 314 (399)
T ss_pred cccCCccceeEEEecC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 9999999999999988 88999988877666778899999999999987667888888899999999999999885 4
Q ss_pred cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
.+..|.+++|+|++++.. .+..+++.++++++||.+.||..|+. ++++||+++. +++++++++++|++
T Consensus 315 ~~~~p~~g~f~~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~l~~l~~ 384 (399)
T PRK07681 315 NVDKPAGSMFVWAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ-DEEVLQQAVENIRN 384 (399)
T ss_pred cccCCCeeeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHH
Confidence 676788899999999854 36778999898669999999998863 5799999995 88999999999987
No 8
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3e-50 Score=380.85 Aligned_cols=351 Identities=22% Similarity=0.334 Sum_probs=303.5
Q ss_pred CCeEEcCCCCCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CC-CcEEEeCChHHHHHHH
Q 015768 30 KNAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YK-SSVMVTAGANQAFVNI 105 (400)
Q Consensus 30 ~~~i~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~-~~i~~~~g~t~a~~~~ 105 (400)
++.++|+.|+++ .++|+.+.+++.+.+.......|++..|.+++|+++++++++.+|+ ++ ++|++|+|+++++..+
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~ 118 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLA 118 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHH
Confidence 678999999977 4677889999888876654567988899999999999999998874 56 8999999999999999
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC----CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS----SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
+.+++++||+|++++|+|+.+...++..|.+++.+ +.+ ++++.+|++.+++.+++++ +++++++|+||||.++
T Consensus 119 ~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~~~~d~~~l~~~~~~~~--k~v~l~~P~NPTG~~~ 195 (405)
T PRK06207 119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV-QLDYLSADKRAGLDLDQLEEAFKAGV--RVFLFSNPNNPAGVVY 195 (405)
T ss_pred HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-eccccCcccCCCcCHHHHHHhhhhcC--eEEEECCCCCCCCcCC
Confidence 99999999999999999999999999999999988 775 2356789999999887655 8999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
+.+++++|+++|++||+++|+||+|..+.+++.+.. ....+++++++||||.++++|+|+||++.+ ++++++
T Consensus 196 s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~---~~l~~~ 272 (405)
T PRK06207 196 SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS---PAIIDR 272 (405)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC---HHHHHH
Confidence 999999999999999999999999999987653321 123578899999999999999999999988 789999
Q ss_pred HHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHH
Q 015768 257 LLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 257 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (400)
+.........+.+.+.|.++..+|+.+..++.+..+.++++++.+.+.|++++.+.+..|.+++|+|++++....+..++
T Consensus 273 ~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~ 352 (405)
T PRK06207 273 MEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDF 352 (405)
T ss_pred HHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHH
Confidence 88877666667788899999999986556778888888888999999998876567777888999999998633367888
Q ss_pred HHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 337 VRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+..+++++||.+.||..|+ .++++||+++. +.+++++++++|+++++++.
T Consensus 353 ~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~-~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 353 VKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ-DHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred HHHHHHhcCEEEeCchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence 8888767899999999885 36899999997 89999999999999997753
No 9
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-49 Score=374.48 Aligned_cols=370 Identities=25% Similarity=0.367 Sum_probs=313.5
Q ss_pred HHHHhhhcCchHHHHHHHH----HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768 7 LAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+++|+.+.....+.++.+. ...++++++|+.|.+++++|+.+++++.+.+... ...|++..|.+++|+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~ 83 (387)
T PRK08960 5 YSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAG-HTRYTAARGLPALREAIAGFYA 83 (387)
T ss_pred hhhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCccCCCCCCHHHHHHHHHHHH
Confidence 5677776666666654443 4557899999999999988999999999988754 4568888999999999999998
Q ss_pred hhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhh
Q 015768 83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTL 159 (400)
Q Consensus 83 ~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l 159 (400)
+.+| +++++|++|+|+++++..++.++.++||+|++++|+|+.+...++..|.+++.+ |.+.+ ++.+|++.+++.+
T Consensus 84 ~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~ 162 (387)
T PRK08960 84 QRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLV-PVGPDSRYQLTPALVERHW 162 (387)
T ss_pred HHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEE-ecCcccCCCCCHHHHHHHh
Confidence 8765 568999999999999999999999999999999999999999999999999988 88755 5778999999988
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCc
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g 238 (400)
++++ +++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++.... ....+++++++|+||.+|++|
T Consensus 163 ~~~~--~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 240 (387)
T PRK08960 163 NADT--VGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTG 240 (387)
T ss_pred Cccc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcc
Confidence 8665 8889999999999999999999999999999999999999998877543221 122467899999999999999
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 317 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 317 (400)
+|+||++.+ +++++++.........+++.+.|.++..++.. ..+++.+.++.++++++.+.+.|++++...+..|.
T Consensus 241 lRiG~~~~~---~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (387)
T PRK08960 241 WRLGWLVAP---PAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ 317 (387)
T ss_pred cEEEEEEcC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence 999999999 78888888777666677899999999888874 24678888889999999999999988653334677
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+++|+|++++....+..+++.++++++||.+.||..|+. ++++|++++. +.+.+.+++++|+++++
T Consensus 318 g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~-~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 318 GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ-SLPRLQEAVERIARGLR 386 (387)
T ss_pred eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 899999999863336788888887789999999998864 4699999996 88999999999998875
No 10
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5e-49 Score=372.91 Aligned_cols=374 Identities=25% Similarity=0.365 Sum_probs=319.2
Q ss_pred hhHHHHhhhcCchHHHHHH----HHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQ----ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
|+.++|+.....+.+.++. +..+.++++++|+.|.+++++++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~ 82 (402)
T PRK06107 4 FVPAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERG-ETKYTLVNGTPALRKAIIAK 82 (402)
T ss_pred hhhhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHH
Confidence 4788898765555554432 234567889999999999988899999998888654 46798889999999999999
Q ss_pred HHhhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHH
Q 015768 81 LNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEK 157 (400)
Q Consensus 81 l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~ 157 (400)
+++.+|. .+++|++|+|+++|+..++.++.++||+|++++|+|.++...+...+..++.+ +.+ ++++.++++.+++
T Consensus 83 l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v-~~~~~~~~~~~~~~l~~ 161 (402)
T PRK06107 83 LERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIV-ACPEEQGFKLTPEALEA 161 (402)
T ss_pred HHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEe-cCCcccCCCCCHHHHHh
Confidence 9988776 57899999999999999999999999999999999999998888888888888 775 4567889999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEcccccccccCCCCccc---c---CCCcEEEEecc
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-GSWLVVDNTYEYFMYDGRKHCC---V---EGDHVVNLFSF 230 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-~~~li~D~a~~~~~~~~~~~~~---~---~~~~~i~~~s~ 230 (400)
.+.+++ +++++++|+||||.+++.+++++++++|++| ++++|+||+|..+.+.+..... . ..+++++++|+
T Consensus 162 ~~~~~~--~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~ 239 (402)
T PRK06107 162 AITPRT--RWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGV 239 (402)
T ss_pred hcCcCc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEecc
Confidence 887554 8999999999999999999999999999998 9999999999988775532221 1 13579999999
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE 310 (400)
Q Consensus 231 sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (400)
||.+|++|+|+||++.+ +++++.+.......+.+++.+.|.++..+|+.+..++++.++.+.++++.+.+.|+++++
T Consensus 240 SK~~~~pGlRiG~~~~~---~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g 316 (402)
T PRK06107 240 SKTYAMTGWRIGYAAGP---ADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPG 316 (402)
T ss_pred chhhcCcccceeeeecC---HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999998 789999988877667889999999999999866678888899999999999999998866
Q ss_pred CcccCCCCceEEEeeCCCC----------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768 311 GAVKGGEGAIYLWARLPEK----------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
+.+..|.+++|+|++++.. ..+..+++.++++++||.+.||..|+.++++|++++. +++++++++++|+
T Consensus 317 ~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~-~~e~l~~~l~~l~ 395 (402)
T PRK06107 317 LSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT-SLETLEEACARIE 395 (402)
T ss_pred CcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHH
Confidence 6888888999999987421 1245678888888899999999999888999999996 8999999999999
Q ss_pred HHHHHH
Q 015768 381 RGLEEL 386 (400)
Q Consensus 381 ~~l~~~ 386 (400)
++++++
T Consensus 396 ~~l~~~ 401 (402)
T PRK06107 396 RAVAAL 401 (402)
T ss_pred HHHHhc
Confidence 998764
No 11
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=3.3e-49 Score=372.98 Aligned_cols=369 Identities=21% Similarity=0.322 Sum_probs=308.5
Q ss_pred hhHHHHhhhcCchHHHHHHH----HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
+++++++.....+.+..+.. ..+.++++++|+.++++.++++.+.+++.+.+.......|++..|.+++|++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~ 82 (389)
T PRK08068 3 FEPSELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADF 82 (389)
T ss_pred CchhhHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Confidence 45777876655444444433 23456789999999988877888999998887765466798889999999999999
Q ss_pred HHhhcC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHH
Q 015768 81 LNQENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE 156 (400)
Q Consensus 81 l~~~~~--~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~ 156 (400)
+.+.+| ++++ +|++|+|+++++..++.++.++||+|++++|+|+.+...++..|++++.+ |.+++ |+.+|+++++
T Consensus 83 ~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~ 161 (389)
T PRK08068 83 YKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETM-PLIAENNFLPDYTKIP 161 (389)
T ss_pred HHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEe-ecccccCCCCCHHHHH
Confidence 988776 5677 89999999999999999999999999999999999999999999999999 88754 7888999999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-ccc---c-CCCcEEEEeccc
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HCC---V-EGDHVVNLFSFS 231 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~~---~-~~~~~i~~~s~s 231 (400)
+.+..++ ++|++++||||||.++|.+++++|+++|++|++++|+||+|..+.+++.. ... . ..++.++++|||
T Consensus 162 ~~~~~~~--~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~S 239 (389)
T PRK08068 162 EEVAEKA--KLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLS 239 (389)
T ss_pred Hhccccc--eEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecch
Confidence 8886554 99999999999999999999999999999999999999999988776422 111 1 235789999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|.||++|+|+||++.+ +++++.+.........+.+++.+.++..++....+++++.++.++++++.+.+.|++++.
T Consensus 240 K~~g~~GlRiG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g~- 315 (389)
T PRK08068 240 KTFNMAGWRVAFAVGN---ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIGW- 315 (389)
T ss_pred hccCCccceeEeEecC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence 9999999999999988 889998887776555566667788888888765678888999999999999999998864
Q ss_pred cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
.+..+.+++|+|++++... +..++.+++++++||.+.||..|+. ++++||+++. +++.+.+++++|+++
T Consensus 316 ~~~~~~g~~~~~v~~~~~~-~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~ 386 (389)
T PRK08068 316 EVDAPKGSFFAWMPVPKGY-TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT-DEERLREAVERIGKL 386 (389)
T ss_pred cccCCCeeEEEEEECCCCC-CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC-CHHHHHHHHHHHHHh
Confidence 6777888899999997643 6788999887668999999998864 5799999986 778888888888753
No 12
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-49 Score=371.97 Aligned_cols=368 Identities=26% Similarity=0.388 Sum_probs=307.9
Q ss_pred hhHHHHhhhcCchHHHHHHHH----HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
|++++|+.......+..+... .+.+++.++|+.|++++++++.+.+++.+.+.......|++..|.+++|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 81 (385)
T PRK09276 2 MKLADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADW 81 (385)
T ss_pred cchhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence 455677776555544443333 3467889999999999988899999999887654456798888999999999999
Q ss_pred HHhhcCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHH
Q 015768 81 LNQENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLE 156 (400)
Q Consensus 81 l~~~~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~ 156 (400)
+.+.+|. +++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.+ |.++ +|+.+|++.++
T Consensus 82 ~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v-~~~~~~g~~~d~~~l~ 160 (385)
T PRK09276 82 YKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFM-PLKEENGFLPDLDAIP 160 (385)
T ss_pred HHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEE-ecCCCCCCcCCHHHHH
Confidence 9988764 465 58999999999999999999999999999999999999999999999999 8864 47888999998
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccc
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFS 231 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~s 231 (400)
+.+..++ ++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..... . ..+++++++|||
T Consensus 161 ~~~~~~~--~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 238 (385)
T PRK09276 161 EDVAKKA--KLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLS 238 (385)
T ss_pred Hhccccc--eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecch
Confidence 8887655 99999999999999999999999999999999999999999988875432211 1 135679999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|.+|++|+|+||++++ +++++.+.........+.+.+.+.++..+++....++++.++.++++++.+.+.|++++ +
T Consensus 239 K~~g~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~ 314 (385)
T PRK09276 239 KTYNMTGWRIGFAVGN---ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKLG-L 314 (385)
T ss_pred hhcCCcchhheeeeCC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 9999999999999988 78888888766555556777889999999976567888889999999999999999885 4
Q ss_pred cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
.+..+.+++|+|++++... +..+++.++++++||.+.||..|+. ++++||+++. +++++.+++++|.+
T Consensus 315 ~~~~~~~~~~~~v~~~~~~-~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 384 (385)
T PRK09276 315 EVEPPKATFYVWAPVPKGY-TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV-PDERIEEAVERIKK 384 (385)
T ss_pred cccCCCcceEEEEECCCCC-CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHhh
Confidence 7777888899999998643 6788888888778999999988864 5799999985 88888888888764
No 13
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.4e-49 Score=371.08 Aligned_cols=367 Identities=26% Similarity=0.417 Sum_probs=313.3
Q ss_pred HHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--
Q 015768 9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-- 86 (400)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-- 86 (400)
+++.+...+.+..+.......++.++|+.|++++++++.+.+++.+.+.+. ...|++..|.+++|+++++++.+.+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~la~~~~~~~~~~ 81 (382)
T PRK06108 3 PAARALPESGIREVANAGRGREGVLPLWFGESDLPTPDFIRDAAAAALADG-ETFYTHNLGIPELREALARYVSRLHGVA 81 (382)
T ss_pred hhhhhCCchHHHHHHHHHhccCCeEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 344444555556666665566789999999999998999999999888764 35698889999999999999998877
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC--CCCCCCHHHHHHhhccCCC
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPT 164 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~e~l~~~l~~~~~ 164 (400)
+++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ |.++ +++.+|++.+++.+++++
T Consensus 82 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~- 159 (382)
T PRK06108 82 TPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCV-PLDFGGGGWTLDLDRLLAAITPRT- 159 (382)
T ss_pred cCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEe-eCCCCCCCccCCHHHHHHhcCccc-
Confidence 678999999999999999999999999999999999999999999999999999 8864 356789999999887654
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC-CCCcc----cc-CCCcEEEEeccccccCCCc
Q 015768 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD-GRKHC----CV-EGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~-~~~~~----~~-~~~~~i~~~s~sK~~g~~g 238 (400)
+++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.++ +.... .. ..+++++++|+||.+|++|
T Consensus 160 -~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 238 (382)
T PRK06108 160 -RALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTG 238 (382)
T ss_pred -eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcc
Confidence 89999999999999999999999999999999999999999998875 22111 11 2367899999999999899
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 318 (400)
+|+||++++ +++++.+.........+++.+.+.++..+|+.+.+++++.+++++++++.+.+.|++++++.+..|.+
T Consensus 239 ~RiG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~ 315 (382)
T PRK06108 239 WRLGWLVAP---PALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDG 315 (382)
T ss_pred cceeeeeCC---HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCe
Confidence 999999998 78888887765545567889999999999987667788889999999999999999886667778888
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
++|+|++++... +..+++.+|++++||.+.||..|+ .++++|++++. +++++++++++|+++++
T Consensus 316 g~~~~~~l~~~~-~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 316 AMYAFFRIPGVT-DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR-DPARLDEAVERLRRFLA 381 (382)
T ss_pred eEEEEEeCCCCC-CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 999999997543 577898888878999999999885 36799999998 99999999999998874
No 14
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=6.7e-49 Score=370.50 Aligned_cols=365 Identities=25% Similarity=0.372 Sum_probs=306.4
Q ss_pred HHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768 8 AKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
++|+.....+.+..+...+ +.+++.++|+.|++++++++.+++++.+.+.......|++..|.+++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (383)
T TIGR03540 3 ADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKR 82 (383)
T ss_pred chhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4555544444444444433 356899999999999988899999999887655467798888999999999999998
Q ss_pred hcCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768 84 ENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL 159 (400)
Q Consensus 84 ~~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l 159 (400)
.+|+ +++ +|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|.+++.+ |.++ +|+.+|++++++.+
T Consensus 83 ~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v-~~~~~~g~~~d~~~l~~~~ 161 (383)
T TIGR03540 83 RFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEM-PLKEENGFLPDFDAIPEDI 161 (383)
T ss_pred hhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEE-ecCcccCCccCHHHHHhhc
Confidence 8765 455 68999999999999999999999999999999999999999999999999 8874 46778999999888
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEecccccc
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAY 234 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~ 234 (400)
.+++ ++|++++||||||.+++.+++++|+++|++||+++|+||+|..+.+.+..... . ..+++++++||||.+
T Consensus 162 ~~~~--~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~ 239 (383)
T TIGR03540 162 AKKA--KLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTY 239 (383)
T ss_pred cccc--eEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEeccccc
Confidence 7654 99999999999999999999999999999999999999999988775422211 1 135778999999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
|++|+|+||++.+ +++++++.........+.+.+.+.++..+++...+|+++.++.+.++++.+.+.|++++ +.+.
T Consensus 240 g~~GlRiG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~ 315 (383)
T TIGR03540 240 NMTGWRIGMAVGN---ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKIG-IDVE 315 (383)
T ss_pred CCccceeeEEeCC---HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEec
Confidence 9999999999988 78888888766545566778899999999987678888889999999999999999985 4777
Q ss_pred CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
.+.+++|+|++++.. .+..+++.++++++||.+.||..|+. ++++||+++. +++++++++++|++
T Consensus 316 ~~~~~~~~~~~l~~~-~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 316 KPKATFYVWVPVPEG-YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV-PDERLEEAVARIKK 382 (383)
T ss_pred CCCcceEEEEECCCC-CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC-CHHHHHHHHHHHhh
Confidence 788899999999854 36788998887789999999998863 5799999985 78888888888764
No 15
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.4e-48 Score=368.56 Aligned_cols=373 Identities=25% Similarity=0.415 Sum_probs=315.1
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~ 86 (400)
.++|+.+...+.+.++.+..++.+++++|+.|++++++++.+.+++.+.+... ...|++..|.+++++++++++.+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~ 85 (391)
T PRK07309 7 FNKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYN 85 (391)
T ss_pred HHhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 35666666666777777766666889999999999988888999988877643 35688888999999999999988877
Q ss_pred C--C-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-
Q 015768 87 L--Y-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK- 162 (400)
Q Consensus 87 ~--~-~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~- 162 (400)
+ . +++|++|+|+++++..++.++.++||+|++++|+|.++...++..|.+++.+ |.+++++.+|.+.+++.++..
T Consensus 86 ~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~ 164 (391)
T PRK07309 86 LDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEI-DTTENDFVLTPEMLEKAILEQG 164 (391)
T ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEE-ecCCcCCcCCHHHHHHHhhccC
Confidence 5 3 4789999999999999999999999999999999999999999999999999 887777788999999988642
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCCCcEEEEeccccccCCCcc
Q 015768 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~g~~g~ 239 (400)
..++++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+.+..... ...+++++++|+||.+|++|+
T Consensus 165 ~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 244 (391)
T PRK07309 165 DKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW 244 (391)
T ss_pred CCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc
Confidence 23599999999999999999999999999999999999999999999875432211 234788999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 319 (400)
|+||++++ +++++++.........+++.+.|.++..+++++..+....++.++++++.+.+.|++++ +.+..|.++
T Consensus 245 RvG~~v~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~p~gg 320 (391)
T PRK07309 245 RIGLIFAP---AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-FKIIKPDGA 320 (391)
T ss_pred eeEEEEeC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCee
Confidence 99999999 78888888765444557788999999999987555556667788888999999999886 477778889
Q ss_pred eEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 320 ~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+|+|++++... .+..+++.++++++||.+.||..|+. ++++|++++. +.+++++++++|+++++++
T Consensus 321 ~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 321 FYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA-SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 99999987542 24677887777789999999998864 6799999996 7899999999999999765
No 16
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6.1e-49 Score=372.43 Aligned_cols=356 Identities=19% Similarity=0.279 Sum_probs=299.4
Q ss_pred hcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHH
Q 015768 27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~ 100 (400)
..++++|+|+.|+++ +++|+.+++++.+.+.+.....|++..|..++|+++++++.+.+| +++++|++|+|+++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~ 108 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH 108 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence 457899999999998 889999999999988876567798889999999999999988765 56899999999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (400)
Q Consensus 101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~ 179 (400)
++..++.+++++||.|+++.|+|+.+...++..|.+++.+ +.+ ++++.+|++.++++++.++ +++++++||||||.
T Consensus 109 al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~~~~~nP~NPTG~ 185 (409)
T PLN00143 109 AAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHF-DLLPEKGWEVDLDAVEAIADENT--IAMVIINPGNPCGS 185 (409)
T ss_pred HHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEE-eccCCCCCcCCHHHHHHhcccCC--EEEEEECCCCCCCC
Confidence 9999999999999999999999999999999999999999 774 4678899999999887655 89999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHH--
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-- 253 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~-- 253 (400)
+++.+++++|+++|++|++++|+||+|..+.+++..... ...+++++++||||.|+++|+|+||++.++. +.+
T Consensus 186 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p-~~~~~ 264 (409)
T PLN00143 186 VYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDP-SGLLQ 264 (409)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCc-hhhhh
Confidence 999999999999999999999999999999886532211 1235789999999999999999999998431 223
Q ss_pred ----HHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCC
Q 015768 254 ----ATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLP 327 (400)
Q Consensus 254 ----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~ 327 (400)
++.+........ .++.+.|.++..+|+++ .+++++.++.++++++.+.+.|++++... ...|++++|+|++++
T Consensus 265 ~~~~~~~~~~~~~~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~ 343 (409)
T PLN00143 265 ICEIADSIKKALNPAP-FPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLN 343 (409)
T ss_pred hHHHHHHHHHHHhccC-CCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecc
Confidence 333433332222 34788999999999853 46888889999999999999999876533 346778999999997
Q ss_pred CC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 328 EK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 328 ~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.. ..+..+++.++++++||.+.||..|+.++++||+++. +++++++++++|+++++++.+
T Consensus 344 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~-~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 344 LLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV-EQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred hhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHHhcc
Confidence 42 1246677777877899999999999888999999995 899999999999999987765
No 17
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=4.9e-49 Score=372.69 Aligned_cols=361 Identities=22% Similarity=0.317 Sum_probs=305.8
Q ss_pred HHhhhcCchHHHHHHHHHh-----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768 9 KRALETEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
+|+.+...+.+..+.++++ .|++.++|+.|++++++++.+.+++.+.+.. ...|++..|..++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~ 80 (396)
T PRK09147 3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDG--LASYPTTAGLPALREAIAAWLER 80 (396)
T ss_pred chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHHHH
Confidence 4556666667777777764 3679999999999998899999999887653 67798889999999999999998
Q ss_pred hcC---CCCC-cEEEeCChHHHHHHHHHHhcCC---CCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHH
Q 015768 84 ENK---LYKS-SVMVTAGANQAFVNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWL 155 (400)
Q Consensus 84 ~~~---~~~~-~i~~~~g~t~a~~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l 155 (400)
.+| ++++ +|++|+|+++++..++.++++| ||.|+++.|+|+.+...++..|++++.+ |.++ ++|.+|++.+
T Consensus 81 ~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-p~~~~~~~~~d~~~l 159 (396)
T PRK09147 81 RYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFL-NCDPANNFAPDFDAV 159 (396)
T ss_pred HhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEe-ccCccccCccCHHHH
Confidence 877 4554 8999999999999999999999 8999999999999999999999999999 8874 4678999999
Q ss_pred HHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Cccc---------cCCCcE
Q 015768 156 EKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCC---------VEGDHV 224 (400)
Q Consensus 156 ~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~---------~~~~~~ 224 (400)
++.+.+++ +++++++||||||.+++.+++++|+++|++|+++||+||+|..+.+++. +... ...+++
T Consensus 160 ~~~~~~~~--k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (396)
T PRK09147 160 PAEVWART--QLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRL 237 (396)
T ss_pred HHHHhhcc--EEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccE
Confidence 88776544 9999999999999999999999999999999999999999999887652 1110 123688
Q ss_pred EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (400)
++++||||.++++|+|+||++++ +++++++.......+++++.+.+.++...+.. .+++.+.++.++++++.+.+.
T Consensus 238 i~~~S~SK~~~~~GlRiG~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 313 (396)
T PRK09147 238 VVFHSLSKRSNVPGLRSGFVAGD---AALLKKFLLYRTYHGCAMPPAVQAASIAAWND-EAHVRENRALYREKFDAVTPI 313 (396)
T ss_pred EEEeccccccCCccceeeeecCC---HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998 78888887766555667888899888887764 567888889999999999999
Q ss_pred hccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--------CCeEEEEeccCCHHHHHHHH
Q 015768 305 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGGLVEDDCKAAA 376 (400)
Q Consensus 305 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~~~ 376 (400)
|++. +.+..|.+++|+|++++ .+..+++.++++++||.+.||..|+. .+++||+++. +++++++++
T Consensus 314 L~~~--~~~~~p~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~-~~~~l~~~l 387 (396)
T PRK09147 314 LAPV--LDVQLPDAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA-PLAECVEAA 387 (396)
T ss_pred HHHh--cCCCCCCeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-CHHHHHHHH
Confidence 9875 35667888999999998 25678888887788999999987741 4799999997 789999999
Q ss_pred HHHHHHHH
Q 015768 377 DRLRRGLE 384 (400)
Q Consensus 377 ~~l~~~l~ 384 (400)
++|++++.
T Consensus 388 ~rl~~~~~ 395 (396)
T PRK09147 388 ERIVDFCR 395 (396)
T ss_pred HHHHHHhc
Confidence 99998774
No 18
>PLN02187 rooty/superroot1
Probab=100.00 E-value=6.7e-49 Score=375.59 Aligned_cols=357 Identities=21% Similarity=0.317 Sum_probs=300.1
Q ss_pred CCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHH
Q 015768 29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF 102 (400)
Q Consensus 29 ~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~ 102 (400)
++++|+|+.|+++ +.+++++.+++.+.+..+....|++..|..++|+++++++.+.++ +++++|++|+|+++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al 144 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGI 144 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHH
Confidence 5789999999987 456788999999988766566798899999999999999988764 5799999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
..++.++++|||+|+++.|+|+.+...++..|++++.+ +..+ +++.+|++.+++.+++++ +++++++|+||||.++
T Consensus 145 ~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~l~~~~~~~~d~~~l~~~~~~~~--~~v~i~nP~NPTG~v~ 221 (462)
T PLN02187 145 EIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKF-DLLPEKEWEIDLEGIEAIADENT--VAMVVINPNNPCGNVY 221 (462)
T ss_pred HHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEE-eCccccCCccCHHHHHHhcCCCc--EEEEEeCCCCCCCCcc
Confidence 99999999999999999999999999999999999998 7643 467899999999887665 8999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc----CCCcEEEEeccccccCCCcceeEEEEccCCcHH---HH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG---FA 254 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~---~~ 254 (400)
+.+++++|+++|++||+++|+||+|..+.+++.++... ...++++++||||.|+++|+|+||++.+++ +. .+
T Consensus 222 s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p-~~~~~~~ 300 (462)
T PLN02187 222 SHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDP-EGVFETT 300 (462)
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCc-hhHHHHH
Confidence 99999999999999999999999999988865432111 123589999999999999999999998531 22 33
Q ss_pred HHHHHhhccCCc--CccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCCC-
Q 015768 255 TQLLKVQDNIPI--CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEK- 329 (400)
Q Consensus 255 ~~l~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~- 329 (400)
+.+......... +++.+.|.++..+|+. ..+++++.++.++++++.+.+.|++++... +..|.+++|+|++++..
T Consensus 301 ~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~ 380 (462)
T PLN02187 301 KVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSL 380 (462)
T ss_pred HHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhh
Confidence 456555544333 4588999999999975 347889999999999999999999987543 34677789999987631
Q ss_pred ---CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhccC
Q 015768 330 ---HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKDG 390 (400)
Q Consensus 330 ---~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 390 (400)
..+..+++.++++++||.+.||..|+.++++||+++. +++.+++++++|.++++.+.+..
T Consensus 381 ~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~-~~e~l~~al~rL~~~l~~~~~~~ 443 (462)
T PLN02187 381 MDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV-EAHMLEDALERLKGFCTRHAKKT 443 (462)
T ss_pred CCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhhhcc
Confidence 1245677777878999999999999888999999996 79999999999999998887543
No 19
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=1.7e-48 Score=367.41 Aligned_cols=369 Identities=25% Similarity=0.398 Sum_probs=316.4
Q ss_pred HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 015768 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~ 87 (400)
+.|+.+...+.+.++..++...++.++|+.+.+.+++++.+.+++.+.+.+. ...|++..|..++|+++++++.+.+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~g~ 84 (387)
T PRK07683 6 NPRVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACNFVKDKYDL 84 (387)
T ss_pred hHHHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 6788877777777777777667889999999988887888999999888754 567888899999999999999887765
Q ss_pred --CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768 88 --YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (400)
Q Consensus 88 --~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~ 164 (400)
+++ +|++|+|+++|+..++.++.++||+|+++.|+|.++...++..|++++.+ +.+++|+.++.+.+++.+.+++
T Consensus 85 ~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~~- 162 (387)
T PRK07683 85 HYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFI-DTRSTGFRLTAEALENAITEKT- 162 (387)
T ss_pred CCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEe-ecCcccCCCCHHHHHHhcCcCc-
Confidence 677 99999999999999999999999999999999999999999999999999 8888888889999999887654
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--c--CCCcEEEEeccccccCCCcce
Q 015768 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--V--EGDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~--~~~~~i~~~s~sK~~g~~g~~ 240 (400)
+++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..... . ..+++++++|+||.+|++|+|
T Consensus 163 -~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlR 241 (387)
T PRK07683 163 -RCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWR 241 (387)
T ss_pred -eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccce
Confidence 99999999999999999999999999999999999999999998775432211 1 245789999999999999999
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 320 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 320 (400)
+||++.+ +++++++.........+++.+.|.++..+|..+..+.++.++.++++++.+.+.|++.+ +.+..+.+++
T Consensus 242 iG~i~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~ 317 (387)
T PRK07683 242 IGFLFAP---SYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVEKPTGAF 317 (387)
T ss_pred eEEEEcC---HHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CcccCCCeeE
Confidence 9999999 78888887665433455677889999999987667777888889999999999998875 4677788899
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
|+|+.++....+..+++.++++++||.+.||..|+. ++++||+++. +++++.+++++|.+++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~-~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 318 YLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred EEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 999998753335677887777789999999998863 5899999997 899999999999998865
No 20
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=5.6e-49 Score=370.36 Aligned_cols=359 Identities=23% Similarity=0.385 Sum_probs=305.4
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC-cEEEe
Q 015768 19 MVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMVT 95 (400)
Q Consensus 19 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~-~i~~~ 95 (400)
+.++.+..++.++.|+|+.|++++++++.+.+++.+.+... ...|++..|.+++|+++++++.+.+|+ +++ +|++|
T Consensus 9 ~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t 87 (378)
T PRK07682 9 IRKFFDLAANMEGVISLGVGEPDFVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVT 87 (378)
T ss_pred HHHHHHHHHhcCCeEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEe
Confidence 33444444444689999999999988888888888877643 567988899999999999999988765 454 79999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
+|+++++..++.++++|||+|++++|+|+.+...++..|.+++.+ +.+. +++.+|++++++.+.+++ +++++++|+
T Consensus 88 ~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~ 164 (378)
T PRK07682 88 VGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPV-ATTLENEFKVQPAQIEAAITAKT--KAILLCSPN 164 (378)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEe-ecCCccCCCCCHHHHHhhcCccc--EEEEEECCC
Confidence 999999999999999999999999999999999999999999888 7753 356789999999887654 999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~ 250 (400)
||||.+++.+++++|+++|++|++++|+||+|..+.+++.... .. ..+++++++||||.+|++|+|+||++.+
T Consensus 165 NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--- 241 (378)
T PRK07682 165 NPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP--- 241 (378)
T ss_pred CCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC---
Confidence 9999999999999999999999999999999999988653211 11 2367899999999999999999999998
Q ss_pred HHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC
Q 015768 251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH 330 (400)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (400)
+++++.+........++++.+.|.++..+|+.+..+.+++++.++++++.+.+.|++++. .+..|.+++|+|+.++...
T Consensus 242 ~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~g~~~~~~~~~~~~ 320 (378)
T PRK07682 242 VYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIGL-TCHVPGGAFYAFPSISSTG 320 (378)
T ss_pred HHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCeeEEEEEeccCCC
Confidence 789998877665555678899999999999876677888889999999999999999854 7777888999999886433
Q ss_pred CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 331 LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 331 ~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+..+++.++++++||.+.||..|+. ++++|||++. +++++++++++|+++++++
T Consensus 321 ~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 321 LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT-SLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 46788988887788999999998863 6899999997 8999999999999988753
No 21
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-49 Score=370.87 Aligned_cols=371 Identities=26% Similarity=0.439 Sum_probs=318.9
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~ 86 (400)
+++|+.+.....+.++.+..+..+++++|+.+++++++++.+.+++.+.+... ...|++..|.+++|+++++++.+.+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g 88 (391)
T PRK08361 10 IAGRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYG 88 (391)
T ss_pred hhHHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 57888877777778877776666789999999999988889999988887654 45688889999999999999987765
Q ss_pred --CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCC
Q 015768 87 --LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKP 163 (400)
Q Consensus 87 --~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~ 163 (400)
+++++|++|+|+++++..++.+++++||+|++++|+|.++...++..|.+++.+ |.+++ ++.+|++++++.+++++
T Consensus 89 ~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~ 167 (391)
T PRK08361 89 VDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRI-PLREENEFQPDPDELLELITKRT 167 (391)
T ss_pred CCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEE-ecCCccCCCCCHHHHHHhccccc
Confidence 568999999999999999999999999999999999999999999999999999 88765 46789999999988665
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcce
Q 015768 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~ 240 (400)
+++++++|+||||.++|.+++++|+++|+++++++|+||+|..+.+.+.... ....+++++++|+||.+|++|+|
T Consensus 168 --~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlR 245 (391)
T PRK08361 168 --RMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWR 245 (391)
T ss_pred --EEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhh
Confidence 8999999999999999999999999999999999999999998877543221 12346889999999999999999
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 318 (400)
+||++++ +++++.+.........+.+.+.+.++..+|+.+. ++.++.++.++++++.+.+.|++++++.+..|++
T Consensus 246 iG~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g 322 (391)
T PRK08361 246 LGFVIAP---EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKG 322 (391)
T ss_pred hhhhccC---HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCE
Confidence 9999998 7888888776655566778899999999998644 4678888889999999999999886677888888
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
++|+|++++....+..+++.++++++||.+.||..|+. ++++||+++. +++++++++++|++++++
T Consensus 323 ~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 323 AFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT-SKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 99999999853346888988887778999999998864 5799999996 888999999999998864
No 22
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=2.2e-48 Score=368.43 Aligned_cols=373 Identities=23% Similarity=0.350 Sum_probs=308.8
Q ss_pred HHHhhhcCchHHHHHHHHHh----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768 8 AKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
++|+.+.....+.++.++.+ .++++++|+.+++++++++.+++++.+.+.......|++..|..++|+++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 83 (405)
T PRK09148 4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYAR 83 (405)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHH
Confidence 45666555555666555543 46889999999999888899999988887655467898888999999999999988
Q ss_pred hcCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 84 ENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 84 ~~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
.+|+ +++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.+ |.++++. .++.+++.++
T Consensus 84 ~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~--~~~~l~~~~~ 160 (405)
T PRK09148 84 RFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSV-PAEPDEE--FFPALERAVR 160 (405)
T ss_pred HhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEE-eCCCCCC--CccCHHHHHh
Confidence 7664 566 89999999999999999999999999999999999999999999999999 8765542 2344555443
Q ss_pred c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEecccccc
Q 015768 161 T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAY 234 (400)
Q Consensus 161 ~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~ 234 (400)
. ...++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++.+... . ..+.+++++||||.+
T Consensus 161 ~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~ 240 (405)
T PRK09148 161 HSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF 240 (405)
T ss_pred hccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc
Confidence 1 123489999999999999999999999999999999999999999998875532211 1 134678899999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
|++|+|+||++.+ +++++.+.......+++++.+.|.++..+|+...+++++.++.++++++.+.+.|++++. .+.
T Consensus 241 ~~pGlR~G~~v~~---~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~ 316 (405)
T PRK09148 241 SMAGWRMGFAVGN---ERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAGW-DIP 316 (405)
T ss_pred CCcchheeeeeCC---HHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccC
Confidence 9999999999998 889999988776667778899999999999865677888899999999999999998764 666
Q ss_pred CCCCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 315 GGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.|.+++|+|++++... .+..+++.++++++||.+.||..|+. ++++||+++. +.+.+.+++++|.+++..+.+
T Consensus 317 ~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~-~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 317 PPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVE-NEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred CCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999997532 23578888887789999999998864 5799999984 899999999999999988765
No 23
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-48 Score=367.34 Aligned_cols=373 Identities=24% Similarity=0.394 Sum_probs=305.6
Q ss_pred HHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768 8 AKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
++++.+...+.+..+.++. +.++++++|+.|+++...|+.+++++.+.........|++..|...+|+++++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~ 86 (403)
T PRK08636 7 FNKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKR 86 (403)
T ss_pred HHHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence 4555555555555444433 346789999999988877788888887776554467898889999999999999988
Q ss_pred hcC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHH----
Q 015768 84 ENK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWL---- 155 (400)
Q Consensus 84 ~~~--~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l---- 155 (400)
.+| ++++ +|++|+|+++++..++.++++|||+|++++|+|+.+...++..|++++.+ |.+ ++++.+|.+.+
T Consensus 87 ~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l 165 (403)
T PRK08636 87 KYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKM-PLEYNEDFELDEDQFFENL 165 (403)
T ss_pred HhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-eccccccCccChhhhhhHH
Confidence 877 4566 79999999999999999999999999999999999999999999999999 875 34467787754
Q ss_pred HHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC--CCcEEEEec
Q 015768 156 EKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE--GDHVVNLFS 229 (400)
Q Consensus 156 ~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~--~~~~i~~~s 229 (400)
++.++. ....+++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++.+.. ... .+.+++++|
T Consensus 166 ~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S 245 (403)
T PRK08636 166 EKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYT 245 (403)
T ss_pred HHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEe
Confidence 555542 22358999999999999999999999999999999999999999999987653221 121 246778999
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768 230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (400)
+||.+|++|+|+||++.+ +++++.+........++++.+.+.++..+++...++++++++.++++++.+.+.|++.+
T Consensus 246 ~SK~~~~~GlRiG~iv~~---~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 322 (403)
T PRK08636 246 LSKSYNMAGWRVGFVVGN---KKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANAG 322 (403)
T ss_pred cccccCCccceeeeeeCC---HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999998 78888888776544566777888888877765567888888999999999999999875
Q ss_pred CCcccCCCCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 310 EGAVKGGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+.+..|.+++|+|++++... .+..+++..+++++||.+.||..|+. ++++||+++ .+++++++++++|+++++.
T Consensus 323 -~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~-~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 323 -WELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI-ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred -CcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 47777888999999998642 24678888877789999999998864 579999999 5999999999999999976
Q ss_pred H
Q 015768 386 L 386 (400)
Q Consensus 386 ~ 386 (400)
+
T Consensus 401 ~ 401 (403)
T PRK08636 401 L 401 (403)
T ss_pred h
Confidence 3
No 24
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.3e-48 Score=367.31 Aligned_cols=371 Identities=27% Similarity=0.427 Sum_probs=309.6
Q ss_pred hhHHHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
|++++|+.......+..+.+.. +.++++++|+.+.+++++++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~ 79 (388)
T PRK07337 1 MRLAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAW 79 (388)
T ss_pred CchhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence 4677887765555444444333 356889999999999988899999998887654 56798888999999999999
Q ss_pred HHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768 81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK 157 (400)
Q Consensus 81 l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~ 157 (400)
+.+.+| +++++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++++++
T Consensus 80 ~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~l~~ 158 (388)
T PRK07337 80 YARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLV-PSGPAERFQLTAADVEA 158 (388)
T ss_pred HHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEe-ecCCccCCcCCHHHHHh
Confidence 988776 478999999999999999999999999999999999999999999999999999 8875 457889999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCC
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGM 236 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~ 236 (400)
.+.+++ ++|++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+.+..... ...+++++++|+||.+|+
T Consensus 159 ~~~~~~--~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 236 (388)
T PRK07337 159 AWGERT--RGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNM 236 (388)
T ss_pred hcCccc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCC
Confidence 887665 89999999999999999999999999999999999999999988775432211 124667889999999999
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768 237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKG 315 (400)
Q Consensus 237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (400)
+|+|+||++++ +++++++.........+.+.+.|.++..++..+ .++..+.++.++++++.+.+.|++++......
T Consensus 237 ~G~RiG~~~~~---~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~ 313 (388)
T PRK07337 237 TGWRLGWLVVP---EALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVM 313 (388)
T ss_pred chhheeeeecC---HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccC
Confidence 99999999998 788888887766556678899999999998753 24567778888999999999999876422346
Q ss_pred CCCceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 316 ~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
|.+++|+|++++.. ..+..+++.++++++||.+.||..|+. ++++|++++. +++++++++++|.+++
T Consensus 314 p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~-~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 314 PDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT-SMSRLEEAVARLGKLF 387 (388)
T ss_pred CCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHh
Confidence 77899999999752 135778888887789999999998864 5799999997 7999999999998765
No 25
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.8e-49 Score=371.80 Aligned_cols=348 Identities=22% Similarity=0.290 Sum_probs=302.8
Q ss_pred HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 26 ~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
-..++++++|+.|++++..|+.+ +++.+++.+. ...|++..|.+++|+++++++. ++++++|++|+|+++++..+
T Consensus 22 ~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~---~~~~~~vi~t~G~~~al~~~ 96 (373)
T PRK07324 22 DIAESCIDSLTLEELLALAGKNP-EAFYQELGQK-KLTYGWIEGSPEFKEAVASLYQ---NVKPENILQTNGATGANFLV 96 (373)
T ss_pred ccccCCCCCCcHHHHHhccCcch-HHHHHHHhcC-CccCCCCCCCHHHHHHHHHHhc---CCChhhEEEcCChHHHHHHH
Confidence 35578999999999998878877 8888777665 4589988999999999999885 46789999999999999999
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
+.+++++||+|+++.|+|..+...++..|++++.+ |.++ +++.+|++.+++.+++++ |++++++|+||||.+++.+
T Consensus 97 ~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~l~~~~~~~~--kli~i~~p~NPtG~~~~~~ 173 (373)
T PRK07324 97 LYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYW-QLKEENGWLPDLDELRRLVRPNT--KLICINNANNPTGALMDRA 173 (373)
T ss_pred HHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHhCCCCC--cEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999 8875 467789999999887665 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
++++|+++|++||+++|+||+|..+.+++.... ....++.++++|+||.+|++|+|+||++++ +++++++.+....
T Consensus 174 ~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~---~~li~~~~~~~~~ 250 (373)
T PRK07324 174 YLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN---EEVIDILRKYRDY 250 (373)
T ss_pred HHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecC---HHHHHHHHHHhCc
Confidence 999999999999999999999998877542111 122457899999999999999999999997 8999999988876
Q ss_pred CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768 264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (400)
.+.+++.+.+.++..+++..+.+++++++.++++++.+.+.|++.+.+.+..|.++++.|+.++.. .+..+++.+++++
T Consensus 251 ~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~-~~~~~~~~~ll~~ 329 (373)
T PRK07324 251 TMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD-MPSEDFCLKLLKE 329 (373)
T ss_pred EEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC-CCHHHHHHHHHHh
Confidence 677888899999988887645667788888889999999999888666778888888888888653 3678899998888
Q ss_pred cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+||.+.||..|+.++++||+++. +++.+.+++++|+++++++
T Consensus 330 ~gv~v~pg~~F~~~~~iRis~~~-~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 330 TGVLLVPGNRFDLEGHVRIGYCC-DTETLKKGLKKLSEFLREF 371 (373)
T ss_pred cCEEEECccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 99999999999888999999996 7999999999999999764
No 26
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4.4e-48 Score=367.68 Aligned_cols=355 Identities=21% Similarity=0.293 Sum_probs=300.1
Q ss_pred CCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHH
Q 015768 29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF 102 (400)
Q Consensus 29 ~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~ 102 (400)
+.++|+|+.|+|. +++++++.+++.+++..+....|++..|.+++|+++++++.+.++ +++++|++|+|+++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 6799999999975 677899999999988765556798889999999999999988765 4689999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
..++.++.+|||+|+++.|+|+.+.......|++++.+ +.. ++++.+|++.+++++++++ +++++++|+||||.++
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~i~i~~P~NPtG~v~ 207 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHF-DLLPERGWEVDLEGVEALADENT--VAMVIINPNNPCGSVY 207 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-eCCcccCCcCCHHHHHHHhCcCc--eEEEEeCCCCCCCCCC
Confidence 99999999999999999999999998889999999988 654 4568899999999888766 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH---
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA--- 254 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~--- 254 (400)
+.+++++|+++|+++|+++|+||+|..+.+++.++.. ....++++++|+||.|+++|+|+||++.+++ +.++
T Consensus 208 ~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~-~~~~~~~ 286 (430)
T PLN00145 208 SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDP-NGILKET 286 (430)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecc-hhhhhhh
Confidence 9999999999999999999999999998886533222 1245789999999999999999999987431 2332
Q ss_pred ---HHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCC
Q 015768 255 ---TQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEK 329 (400)
Q Consensus 255 ---~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 329 (400)
+.+..... ...+++.+.|.++..+|+. ..+++++.++.++++++.+.+.|++++++.+ ..|.+++|+|++++..
T Consensus 287 ~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~ 365 (430)
T PLN00145 287 KVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLS 365 (430)
T ss_pred HHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChh
Confidence 23333332 2335678999999999986 3478889999999999999999999866554 4688899999998742
Q ss_pred ----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 330 ----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 330 ----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
..+..+++.++++++||.+.||..|+.++++||+++. +.+++++++++|++++.++.+.
T Consensus 366 ~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~-~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 366 CLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI-DPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred hcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhccc
Confidence 1256778888888899999999999989999999995 8999999999999999887653
No 27
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.1e-48 Score=368.47 Aligned_cols=375 Identities=19% Similarity=0.274 Sum_probs=309.1
Q ss_pred HHHhhhcCchHHHHHHHHH--hcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH
Q 015768 8 AKRALETEMPIMVQIQELV--RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL 81 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l 81 (400)
++|+.+...+.-..+..++ ..++++++|+.|.++ +.+++.+.+++.+.+.......|++..|..++|+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~ 88 (412)
T PTZ00433 9 SKHAGRVFNPLRTVTDNAKPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYW 88 (412)
T ss_pred cHHHHhhhccHHHHHHhhccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHH
Confidence 4455544444444444444 478999999999976 4578899999988877654678988889999999999999
Q ss_pred HhhcC--------CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCH
Q 015768 82 NQENK--------LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDA 152 (400)
Q Consensus 82 ~~~~~--------~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~ 152 (400)
.+.++ +++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ |.++ +++.+|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~ 167 (412)
T PTZ00433 89 RNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFY-NCRPEKDWEADL 167 (412)
T ss_pred HhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEE-ecCccccCcCCH
Confidence 87643 678999999999999999999999999999999999999999999999999999 8764 3567899
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc-CCCcEEEEe
Q 015768 153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV-EGDHVVNLF 228 (400)
Q Consensus 153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~-~~~~~i~~~ 228 (400)
+.+++.+++++ ++|++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++.... .. .....++++
T Consensus 168 ~~l~~~~~~~~--~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 245 (412)
T PTZ00433 168 DEIRRLVDDRT--KALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILG 245 (412)
T ss_pred HHHHHHhccCc--eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEc
Confidence 99999887654 9999999999999999999999999999999999999999999887653221 11 123578999
Q ss_pred ccccccCCCcceeEEEEccC--C-cHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMGWRVGYIAYPS--E-VEGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i~~~~--~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~ 304 (400)
||||.+|++|+|+||++..+ . .+++++.+..... ..++++.+.|.++..++... ..++++.++.++++++.+.+.
T Consensus 246 SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~ 324 (412)
T PTZ00433 246 GTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNH 324 (412)
T ss_pred cchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998621 1 1456676666543 23578999999999999763 477888889999999999999
Q ss_pred hccCCCCcccCCCCceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768 305 LSPLGEGAVKGGEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 305 L~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
|+++.++.+..|.+++|+|++++.. ..+..++++.+++++||.+.||..|+.++++|++++. .++++++++++|.
T Consensus 325 L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~l~~al~~l~ 403 (412)
T PTZ00433 325 IGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR-PVEVLREAVERIK 403 (412)
T ss_pred HhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence 9986555777888899999998742 1246788888886789999999999888999999996 7899999999999
Q ss_pred HHHHHHh
Q 015768 381 RGLEELV 387 (400)
Q Consensus 381 ~~l~~~~ 387 (400)
++++...
T Consensus 404 ~~~~~~~ 410 (412)
T PTZ00433 404 AFCERHK 410 (412)
T ss_pred HHHHHhc
Confidence 9998765
No 28
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-48 Score=366.41 Aligned_cols=369 Identities=21% Similarity=0.319 Sum_probs=304.1
Q ss_pred hhHHHHhhhcCchHHHHHHH----HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
+..++++.......+.++.+ .-+.|++.++|+.++++.++|+++++++.+.+.......|++..|.+++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 85 (394)
T PRK05942 6 ITPADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDW 85 (394)
T ss_pred cchhhhhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHH
Confidence 34566665544433433332 23457789999999888777778888887777554457898889999999999999
Q ss_pred HHhhcCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHH
Q 015768 81 LNQENKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLE 156 (400)
Q Consensus 81 l~~~~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~ 156 (400)
+.+.+|+ +++ ++++|+|+++++..++.+++++||+|++++|+|+++...++..|++++.+ |.+. +++.+|+++++
T Consensus 86 ~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~ 164 (394)
T PRK05942 86 YHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPI-ILKPENDWLIDLSSIP 164 (394)
T ss_pred HHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEe-ecCCccCCccCHHHHH
Confidence 9988764 566 58899999999999999999999999999999999998889999999999 8874 46789999999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cC--CCcEEEEeccc
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VE--GDHVVNLFSFS 231 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~--~~~~i~~~s~s 231 (400)
+.+.+++ +++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++..... .. .+.+++++|||
T Consensus 165 ~~~~~~~--k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfS 242 (394)
T PRK05942 165 EEVAQQA--KILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLS 242 (394)
T ss_pred Hhccccc--eEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecch
Confidence 9887654 99999999999999999999999999999999999999999988875432211 11 34678899999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|.||++|+|+||++.+ +++++++........++.+.+.+.++..+++...++.++.++.++++++.+.+.|++.+.
T Consensus 243 K~~~~~GlRiG~i~~~---~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~- 318 (394)
T PRK05942 243 KTYNMAGWRVGFVVGN---RHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGELGW- 318 (394)
T ss_pred hccCChhhheeeeecC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCC-
Confidence 9999999999999998 889999987776556778888999999999765577888889999999999999988754
Q ss_pred cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
.+..+.+++|+|++++... +..++..++++++||.+.||..|+ .++++|++++. +.+.+.+++++|.++
T Consensus 319 ~~~~~~~~~f~~~~~~~~~-~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 319 NIPPTKATMYLWVPCPVGM-GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA-DCDRLGEALDRLKQA 389 (394)
T ss_pred eecCCCeeeEEEEECCCCC-CHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC-CHHHHHHHHHHHHHh
Confidence 6777888899999998543 567788777778999999999885 36899999985 678888888887664
No 29
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=4.5e-48 Score=366.76 Aligned_cols=357 Identities=20% Similarity=0.279 Sum_probs=302.4
Q ss_pred hcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHH
Q 015768 27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~ 100 (400)
+.++++|+|+.|+|+ +++|+.+++++.+++.......|++..|.+++|+++++++.+.+| +++++|++|+|+++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 467899999999987 788999999999988776567898889999999999999988765 56899999999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (400)
Q Consensus 101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~ 179 (400)
++..++.+++++||+|++++|+|+.+....+..|++++.+ |.+ ++++.+|++.+++.+++++ +++++++|+||||.
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i-~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~P~NPtG~ 184 (409)
T PLN02656 108 AIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYV-DLLPEKGWEVDLDAVEALADQNT--VALVIINPGNPCGN 184 (409)
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEE-eCCCcCCCCCCHHHHHHHhccCc--eEEEEECCCCCCCC
Confidence 9999999999999999999999999988888899999999 875 4577899999999887665 89999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCC-----c
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE-----V 250 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~-----~ 250 (400)
+++.+++++|+++|++||+++|+||+|..+.+++..... ....++++++||||.|+++|+|+||++.+++ .
T Consensus 185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~ 264 (409)
T PLN02656 185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRD 264 (409)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCccccccc
Confidence 999999999999999999999999999999886533211 1235789999999999899999999998531 1
Q ss_pred HHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCC
Q 015768 251 EGFATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPE 328 (400)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~ 328 (400)
+++++++...... ..+++.+.|.++..+|++. .+++++.++.++++++.+.+.|+.++... +..|.+++|+|++++.
T Consensus 265 ~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~ 343 (409)
T PLN02656 265 PKIVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNL 343 (409)
T ss_pred HHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecch
Confidence 4677777765442 2357889999999999853 46788889999999999999999876533 3568889999999863
Q ss_pred C----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 329 K----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 329 ~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
. ..+..+++.++++++||.+.||..|+.++++||+++. +++++++++++|++++.....
T Consensus 344 ~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~-~~e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 344 SLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA-DPSSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred hhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHHhcc
Confidence 2 1134566666777899999999999888999999996 899999999999999886653
No 30
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=7e-48 Score=362.89 Aligned_cols=362 Identities=23% Similarity=0.344 Sum_probs=302.6
Q ss_pred HHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC
Q 015768 9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY 88 (400)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~ 88 (400)
+++.....+.+.. ......++++++|+.|.+++++++.+.+++.+.+... ...|++..|.+++++++++++++.+|++
T Consensus 9 ~~~~~~~~~~~~~-~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~ 86 (384)
T PRK12414 9 SKLPDVGTTIFTV-IGQLAAQHDALNLSQGAPNFAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGAR 86 (384)
T ss_pred HhcccCCccHHHH-HHHHHHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCC
Confidence 3343333443333 3333566889999999999988999999998877654 4679888999999999999999988874
Q ss_pred --C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768 89 --K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (400)
Q Consensus 89 --~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~ 165 (400)
+ +++++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.+ |.+++++.+|++.+++.+++++
T Consensus 87 ~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~-- 163 (384)
T PRK12414 87 YDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAI-KLSPEDFRVNWDEVAAAITPRT-- 163 (384)
T ss_pred CCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEE-ecCccccccCHHHHHhhcCccc--
Confidence 3 689999999999999999999999999999999999999999999999999 8877677889999999887654
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-----CCCcEEEEeccccccCCCcce
Q 015768 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-----EGDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~g~~g~~ 240 (400)
++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++...... ..+++++++||||.+|++|+|
T Consensus 164 ~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlR 243 (384)
T PRK12414 164 RMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWR 243 (384)
T ss_pred EEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccce
Confidence 999999999999999999999999999999999999999999988765322111 135789999999999999999
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 320 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 320 (400)
+||++.+ +++++.+........++++.+.|.++..+|+.+.. ..+.++.++++++.+.+.|++.+ +.+..+.+++
T Consensus 244 iG~~v~~---~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~ 318 (384)
T PRK12414 244 VGYCLAP---AELMDEIRKVHQFMVFSADTPMQHAFAEALAEPAS-YLGLGAFYQRKRDLLARELAGSR-FELLPSEGSF 318 (384)
T ss_pred EEEEecC---HHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChH-HHHHHHHHHHHHHHHHHHHHhCC-CeecCCCcce
Confidence 9999999 78888888877666778899999999999986443 34677888999999999999986 4777788899
Q ss_pred EEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 321 YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 321 ~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
|+|++++.. ..+..+++.++++++||.+.||..|+. .+++||+++. +++++++++++|.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~~~rl~~ 383 (384)
T PRK12414 319 FMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK-DDATLVEGARRLCS 383 (384)
T ss_pred EEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 999988642 124567776777789999999998852 4799999997 89999999999864
No 31
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-47 Score=363.64 Aligned_cols=374 Identities=29% Similarity=0.462 Sum_probs=318.9
Q ss_pred hhHHHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
|++|+|+.+...+.+.++.++. ..+++.++|+.+++++++++++.+++.+.+.+. ...|++..|...+|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~ 80 (393)
T PRK05764 2 MKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDG-KTKYTPAAGIPELREAIAAK 80 (393)
T ss_pred cchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCCCCChHHHHHHHHHH
Confidence 5689999987777765555544 346789999999999988899999998888654 44698888999999999999
Q ss_pred HHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768 81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK 157 (400)
Q Consensus 81 l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~ 157 (400)
+.+.+| ++++++++|+|+++++..++.+++++||+|++++|+|..+..+++..|.+++.+ |.++ +++.+|++.+++
T Consensus 81 ~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~ 159 (393)
T PRK05764 81 LKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFV-PTGEENGFKLTVEQLEA 159 (393)
T ss_pred HHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEE-ecCcccCCcCCHHHHHH
Confidence 988765 568999999999999999999999999999999999999999999999999999 8774 467889999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC---cc---ccCCCcEEEEeccc
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HC---CVEGDHVVNLFSFS 231 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~---~~~~~~~i~~~s~s 231 (400)
.+.+++ +++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++.. .. ....+++++++|+|
T Consensus 160 ~l~~~~--~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S 237 (393)
T PRK05764 160 AITPKT--KALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFS 237 (393)
T ss_pred hhCccc--eEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCc
Confidence 987654 89999999999999999999999999999999999999999988775432 11 12245889999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|.+|++|+|+||++.+ +++++++.........+++.+.+.++..+++...+++.+.++.+.++++.+.+.|++++++
T Consensus 238 K~~~~~G~RiG~i~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 314 (393)
T PRK05764 238 KAYAMTGWRLGYAAGP---KELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGL 314 (393)
T ss_pred ccccCccceeEEEecC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9999999999999988 7888888877765667788999999999997445777888888999999999999998556
Q ss_pred cccCCCCceEEEeeCCCCCC----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+..|.+++++|++++.... +..++...+++++||.+.||..|..++++|++++. +++++++++++|.+++++.
T Consensus 315 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~-~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 315 ECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT-SLEDLEEGLERIERFLESL 392 (393)
T ss_pred cccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 77788888999999875421 24788888877889999999988778999999996 8999999999999998753
No 32
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-49 Score=349.14 Aligned_cols=366 Identities=33% Similarity=0.541 Sum_probs=314.5
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~ 86 (400)
.++++.......|..+.++.+.....-.|++|++++++|.-|.+++..+.+.+....|....|.+++++++++.++..+|
T Consensus 8 ~~~~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~ 87 (420)
T KOG0257|consen 8 RNRNLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYG 87 (420)
T ss_pred ccccccccCCcHHHHHHHHHHhcCCCCcccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhc
Confidence 34555566667888888876664443339999999999999999999999988788899999999999999999999765
Q ss_pred C---CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-------CCCCCCCHHHHH
Q 015768 87 L---YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-------SKTLHPDADWLE 156 (400)
Q Consensus 87 ~---~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~e~l~ 156 (400)
. +.++|++|.|+.+++..++.+++++||+|++.+|.|..+...++..|..++++ |.. ...|.+|.+.++
T Consensus 88 ~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v-~~~~~~g~~~s~~~~~D~~~le 166 (420)
T KOG0257|consen 88 GLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFV-PLKPKEGNVSSSDWTLDPEELE 166 (420)
T ss_pred cccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceee-ccccccccccCccccCChHHHH
Confidence 3 46789999999999999999999999999999999999999999999999999 776 456889999999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-----cCCCcEEEEeccc
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-----VEGDHVVNLFSFS 231 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-----~~~~~~i~~~s~s 231 (400)
..+++++ |+|++++||||||.+++.++|++|+++|++||+++|+||+|..+.+++..+.. ..+.+.+.++|++
T Consensus 167 ~~~t~kT--k~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~g 244 (420)
T KOG0257|consen 167 SKITEKT--KAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFG 244 (420)
T ss_pred hhccCCc--cEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEecccc
Confidence 9999988 99999999999999999999999999999999999999999999998864332 2356899999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--------HHHHHHHHHHHHHHHHHHH
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--------EWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~~~l~~ 303 (400)
|.+|+.|||+||++++ +.+...+........+..+++.|.|.+.+++... .+..++.+.++++++.|.+
T Consensus 245 Ktf~~TGWrlGW~igp---~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k 321 (420)
T KOG0257|consen 245 KTFGVTGWRLGWAIGP---KHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAK 321 (420)
T ss_pred ceeeeeeeeeeeeech---HHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 8899999999988899999999999999888644 3445588999999999999
Q ss_pred HhccCCCCcccCCCCceEEEeeCCC--------CC---CCHHHHHHHHHHhcCeEEeCCCccCCCC-------eEEEEec
Q 015768 304 ALSPLGEGAVKGGEGAIYLWARLPE--------KH---LDDFEVVRWLAHRHGVVVIPGGACGCRG-------HLRISFG 365 (400)
Q Consensus 304 ~L~~~~~~~~~~~~~~~~~~~~~~~--------~~---~~~~~~~~~l~~~~gi~v~~g~~~~~~~-------~iRi~~~ 365 (400)
.|++++. +++.|++++|+|++++. .. .++-.++.|++++.|+.+.|++.|+.+. .+|++++
T Consensus 322 ~L~~lg~-~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~ 400 (420)
T KOG0257|consen 322 ALEELGL-KVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFC 400 (420)
T ss_pred HHHhcCC-ccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHH
Confidence 9999965 99999999999999881 11 1355688899999999999999998654 5666666
Q ss_pred cCCHHHHHHHHHHHH
Q 015768 366 GLVEDDCKAAADRLR 380 (400)
Q Consensus 366 ~~~~~~~~~~~~~l~ 380 (400)
. +++-++.+.++|+
T Consensus 401 k-~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 401 K-ADETLRKAIERLK 414 (420)
T ss_pred h-hHHHHHHHHHHHh
Confidence 5 5665666655555
No 33
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=3.6e-48 Score=365.33 Aligned_cols=365 Identities=24% Similarity=0.374 Sum_probs=311.8
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~ 86 (400)
+++|++....+.+..+.++.+ +.++++|+.|.+++++++.+.+++.+.+... ...|++..|.+++++++++++.+.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~ 85 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYG 85 (386)
T ss_pred hhhHhhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhC
Confidence 566776666666666665544 4689999999999988889999998887654 46798889999999999999998887
Q ss_pred CC--C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768 87 LY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (400)
Q Consensus 87 ~~--~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~ 163 (400)
.+ + +++++|+|+++++..++.+++++||+|+++.|+|.++...++..|.+++.+ +.+++++.+|++++++.+++++
T Consensus 86 ~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~ 164 (386)
T PRK09082 86 RQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRV-ALQPPDFRVDWQRFAAAISPRT 164 (386)
T ss_pred CCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCcccccCCHHHHHHhcCccc
Confidence 64 3 379999999999999999999999999999999999999999999999999 8876678899999999987654
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccccccCCCc
Q 015768 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~g~~g 238 (400)
+++++++|+||||.+++.+++++|+++|++||+++|+|++|..+.+++..... . ..+++++++||||.+|++|
T Consensus 165 --~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G 242 (386)
T PRK09082 165 --RLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTG 242 (386)
T ss_pred --eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchh
Confidence 99999999999999999999999999999999999999999988875432111 1 2468899999999999999
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 318 (400)
+|+||++++ +++++.+........++++.+.|.++..+++...++.++.++.++++++.+.+.|++.+ +.+..+.+
T Consensus 243 ~RiG~iv~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~g 318 (386)
T PRK09082 243 WKVGYCVAP---AALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR-FKLLPCEG 318 (386)
T ss_pred hhhhhhhCC---HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCe
Confidence 999999998 78999888877666778899999999999875567788888999999999999999865 47777888
Q ss_pred ceEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 319 ~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
++|+|+++++ ...+..+++.+|++++||.+.||..|+. .+++|++++. +++++++++++|++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~-~~~~l~~~~~rl~~ 385 (386)
T PRK09082 319 TYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK-QEETLDAAAERLCQ 385 (386)
T ss_pred eEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC-CHHHHHHHHHHHhh
Confidence 9999999874 2246788999888889999999997742 4799999997 89999999999875
No 34
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=7e-48 Score=375.04 Aligned_cols=374 Identities=19% Similarity=0.331 Sum_probs=301.6
Q ss_pred hhHHHHhhhcCchH----HHHHHHHHhcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 015768 5 AKLAKRALETEMPI----MVQIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77 (400)
Q Consensus 5 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~ 77 (400)
|+.|+|+.+...+. .....++-+.|+++|+|+.|++ ++++|+.+++++.+.+.. ...|++..|..++|+++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~~lReai 194 (517)
T PRK13355 117 FKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--TEGYSDSKGLFSARKAI 194 (517)
T ss_pred CChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCCcChHHHHHHH
Confidence 45788877655433 2333444567889999999987 466799999999888764 45799899999999999
Q ss_pred HHHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHH
Q 015768 78 VKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADW 154 (400)
Q Consensus 78 a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~ 154 (400)
++++.++++ +++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.+++ +|.+|+++
T Consensus 195 a~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~-~~~~~~~~~~d~~~ 273 (517)
T PRK13355 195 MQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHY-RCDEQSEWYPDIDD 273 (517)
T ss_pred HHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEe-ecCcccCCCCCHHH
Confidence 999987763 678999999999999999999999999999999999999999999999999999 77654 58899999
Q ss_pred HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCCC-cEEEEecc
Q 015768 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGD-HVVNLFSF 230 (400)
Q Consensus 155 l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~-~~i~~~s~ 230 (400)
+++.+.+++ ++|++++||||||.+++.+++++|+++|++||++||+||+|..+.+++..+.. ...+ .+++++||
T Consensus 274 l~~~~~~~~--k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~ 351 (517)
T PRK13355 274 IRSKITSRT--KAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGL 351 (517)
T ss_pred HHHhcCcCc--eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecc
Confidence 999987766 99999999999999999999999999999999999999999999886533221 1122 35678999
Q ss_pred ccccCCCcceeEEEEccCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC---cHHHHHHHHHHHHHHHHHHH
Q 015768 231 SKAYGMMGWRVGYIAYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG---PEWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 231 sK~~g~~g~~~G~i~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~l~~ 303 (400)
||.++++|+|+||++.+.+ ++ +++.+.... ...++.+.+.|.++..+|... .+++.+. .++.++++.+.+
T Consensus 352 SK~~~~~G~RiG~~i~~~~-~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~l~~ 428 (517)
T PRK13355 352 SKSHMIAGYRIGWMILSGN-KRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQRELVYN 428 (517)
T ss_pred hhhccCcccceEEEEeeCc-hhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHH
Confidence 9999999999999985421 33 344443332 233567889999999999742 2344333 345566889999
Q ss_pred HhccCCCCcccCCCCceEEEeeCCCC---CCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHH
Q 015768 304 ALSPLGEGAVKGGEGAIYLWARLPEK---HLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADR 378 (400)
Q Consensus 304 ~L~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~ 378 (400)
.|++++++.+..|++++|+|++++.. ..+..+++..+++++||.+.||..|+ .++++||+++ .+++++++++++
T Consensus 429 ~L~~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~-~~~~~l~~a~~r 507 (517)
T PRK13355 429 ALNAIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL-PRLEDLEDAMDR 507 (517)
T ss_pred HHhcCCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC-CCHHHHHHHHHH
Confidence 99998667888899999999998742 12456777777789999999999986 4789999997 489999999999
Q ss_pred HHHHHHHHh
Q 015768 379 LRRGLEELV 387 (400)
Q Consensus 379 l~~~l~~~~ 387 (400)
|+++++.+.
T Consensus 508 l~~~~~~~~ 516 (517)
T PRK13355 508 LADFFSYYR 516 (517)
T ss_pred HHHHHHHhh
Confidence 999998653
No 35
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=8.7e-48 Score=363.23 Aligned_cols=368 Identities=24% Similarity=0.369 Sum_probs=311.5
Q ss_pred HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 015768 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~ 87 (400)
++++.+...+.+..+.+..++ ++.++|+.|.++.+.|+.+++++.+.+... ...|++..|.+++|+++++++.+.+|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~ 82 (387)
T PRK08912 5 NPVFADLPTTIFEVMSQLARE-HGAINLGQGFPDDPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGL 82 (387)
T ss_pred hHHHhhCCCCHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCC
Confidence 566666666667666666554 689999999998887888999888776543 467988899999999999999887764
Q ss_pred --CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768 88 --YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (400)
Q Consensus 88 --~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~ 164 (400)
+++ +|++|+|+++++..++.++.++||+|+++.|+|+.+...++..|++++.+ |.+++++.++++.+++.+.+++
T Consensus 83 ~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~~~~~~- 160 (387)
T PRK08912 83 DLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLV-RLEPPHWRLPRAALAAAFSPRT- 160 (387)
T ss_pred CCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCcccCcCCHHHHHHHhCccc-
Confidence 577 99999999999999999999999999999999999999999999999999 8876667889999999887654
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcEEEEeccccccCCCcc
Q 015768 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~i~~~s~sK~~g~~g~ 239 (400)
+++++++|+||||.+++.+++++|+++|++|++++|+||+|..+.+++.... .. ..+++++++|+||.+|++|+
T Consensus 161 -~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK08912 161 -KAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW 239 (387)
T ss_pred -eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc
Confidence 8999999999999999999999999999999999999999998887643211 11 13678999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 319 (400)
|+||++.+ +++++.+........++.++..+.++..++....+++++.++.++++++.+.+.|+.++ +.+..+.++
T Consensus 240 RiG~~~~~---~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~g~ 315 (387)
T PRK08912 240 KVGFVCAA---PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-FPVLPSQGT 315 (387)
T ss_pred eeEEEecC---HHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCcc
Confidence 99999998 78888887766555677777788888888875567888889999999999999999986 477778888
Q ss_pred eEEEeeCCCC--CCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 320 ~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+|+|++++.. ..+..+++..+++++||.+.||..|+ ..+++|++++. +++++++++++|++++..
T Consensus 316 ~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~-~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 316 YFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK-RDATLDEAVERLAAARRR 386 (387)
T ss_pred eEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 9999999752 23677888888778899999999884 25799999997 789999999999988753
No 36
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.6e-47 Score=364.79 Aligned_cols=358 Identities=22% Similarity=0.289 Sum_probs=292.7
Q ss_pred hcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHH
Q 015768 27 RGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQA 101 (400)
Q Consensus 27 ~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a 101 (400)
+.+.++++++.|++ ++++|+.+.+++.+.+.+.....|++..|.+++|+++++++.+.+| +++++|++|+|++++
T Consensus 29 ~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 29 KLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred hccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 45678999999998 5688899998988887665567899999999999999999998876 568999999999999
Q ss_pred HHHHHHHhcCCCCEEEEeCCCccchhHHH-HhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSF-QMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (400)
Q Consensus 102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~ 179 (400)
+..++. +++|||.|++++|+|+.+.... ...|++++.+ |.++ +++.+|++++++.++..+.++++++++|+||||.
T Consensus 109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~ 186 (433)
T PRK06855 109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTY-RLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGA 186 (433)
T ss_pred HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEE-ecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCc
Confidence 999985 7899999999999999876542 3568888888 8874 5678899999999874333589999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCC-CcEEEEeccccccCCCcceeEEEEccCC--cH--
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSE--VE-- 251 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~-~~~i~~~s~sK~~g~~g~~~G~i~~~~~--~~-- 251 (400)
+++.+++++|+++|++||++||+||+|..+.+.+.+... ... ...++++||||.++++|+|+||++.++. .+
T Consensus 187 ~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~ 266 (433)
T PRK06855 187 VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVF 266 (433)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHH
Confidence 999999999999999999999999999999886533221 112 3579999999999889999999997421 02
Q ss_pred -HHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC
Q 015768 252 -GFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 328 (400)
Q Consensus 252 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 328 (400)
.+.+.+..... ...+++.+.|.++..+++++ ++++++.++.++++++.+.+.|++++++.+..|++++|+|++++.
T Consensus 267 ~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~ 345 (433)
T PRK06855 267 KKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFED 345 (433)
T ss_pred HHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecccc
Confidence 22333333222 23457889999999999875 468888999999999999999988755677889989999999986
Q ss_pred CC--------------------------CCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 329 KH--------------------------LDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 329 ~~--------------------------~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
.. .+..+++.+++++.||.+.||..|+. ..++|||++..+++++++++++|++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~ 425 (433)
T PRK06855 346 GVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAE 425 (433)
T ss_pred ccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHH
Confidence 31 13567777788899999999999963 3579999997789999999999999
Q ss_pred HHHHHh
Q 015768 382 GLEELV 387 (400)
Q Consensus 382 ~l~~~~ 387 (400)
+++++.
T Consensus 426 ~~~~~~ 431 (433)
T PRK06855 426 KIEEYL 431 (433)
T ss_pred HHHHHh
Confidence 998753
No 37
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2e-47 Score=361.35 Aligned_cols=354 Identities=22% Similarity=0.362 Sum_probs=297.9
Q ss_pred cCchHHHHHHHHHh-----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--
Q 015768 14 TEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-- 86 (400)
Q Consensus 14 ~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-- 86 (400)
...+.+.++.++.+ .+++.++|+.|++++++|+.+.+++.+.+.. ...|++..|.+++|+++++++.+.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~ 84 (393)
T TIGR03538 7 LQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLERRFDLP 84 (393)
T ss_pred CCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHhhCCc
Confidence 33445555656554 4678999999999998899999999887753 67798889999999999999988865
Q ss_pred --CCCC-cEEEeCChHHHHHHHHHHhcCCCCE--EEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc
Q 015768 87 --LYKS-SVMVTAGANQAFVNIVLTLCDAGDS--VVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE 160 (400)
Q Consensus 87 --~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~--vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~ 160 (400)
++++ +|++|+|+++++..++.++++|||+ |+++.|+|+.+...++..|++++.+ |.++ +|+.+|.+.+++.+.
T Consensus 85 ~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~ 163 (393)
T TIGR03538 85 TGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFL-NCTAENGFLPDFDAVPESVW 163 (393)
T ss_pred ccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEe-eccccCCCCCCHHHHHHHHh
Confidence 4564 7999999999999999999999986 9999999999999999999999999 8864 468889999998886
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC-Cccc----------cCCCcEEEEec
Q 015768 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-KHCC----------VEGDHVVNLFS 229 (400)
Q Consensus 161 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~~----------~~~~~~i~~~s 229 (400)
.++ |++++++||||||.+++.+++++|+++|++||++||+||+|..+.+.+. +... ...+++++++|
T Consensus 164 ~~~--k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S 241 (393)
T TIGR03538 164 RRC--QLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHS 241 (393)
T ss_pred hcc--eEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEec
Confidence 554 9999999999999999999999999999999999999999998877531 1110 12467899999
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768 230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (400)
+||.++++|+|+||++++ +++++++.........+++.+.|.++...+.. .+++.+.++.++++++.+.+.|+++
T Consensus 242 ~SK~~~~~GlRvG~~i~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~- 316 (393)
T TIGR03538 242 LSKRSNLPGLRSGFVAGD---AEILKAFLRYRTYHGCAMPIPTQLASIAAWND-EQHVRENRALYREKFAAVLEILGQV- 316 (393)
T ss_pred chhhcCCcccceEEEecC---HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 999998999999999998 78888887766555667788899988888864 5678888889999999999999875
Q ss_pred CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 310 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
..+..|.+++|+|++++ .+..+++.++++++||.+.||..|. ..+++||+++. +++++++++++|++
T Consensus 317 -~~~~~p~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 317 -LDLELPDAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA-PLEECVEAAERIRS 391 (393)
T ss_pred -CcccCCCeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC-CHHHHHHHHHHHHH
Confidence 24566888999999998 2567888888778999999999874 24799999997 78999999999987
Q ss_pred H
Q 015768 382 G 382 (400)
Q Consensus 382 ~ 382 (400)
+
T Consensus 392 ~ 392 (393)
T TIGR03538 392 F 392 (393)
T ss_pred h
Confidence 4
No 38
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-47 Score=330.56 Aligned_cols=357 Identities=22% Similarity=0.291 Sum_probs=315.8
Q ss_pred CCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc--CCCCCcEEEeCChHHHH
Q 015768 29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--KLYKSSVMVTAGANQAF 102 (400)
Q Consensus 29 ~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~--~~~~~~i~~~~g~t~a~ 102 (400)
.+++|.++.|+|. +.+.+++.+|+..+++.+...+|+++.|....|+++|+|+.+.. .+++++|++|+|.++|+
T Consensus 60 ~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 60 KKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred CceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 4589999999855 45789999999999999888999999999999999999987776 36799999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~ 182 (400)
+.++.+|.+||..||++.|+|+-+...++..|.++..++-+.+.+|.+|++.++.+++++| .++++.||+||+|.+++
T Consensus 140 e~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT--~AivviNP~NPcGnVys 217 (447)
T KOG0259|consen 140 ELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENT--VAIVVINPNNPCGNVYS 217 (447)
T ss_pred HHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCe--eEEEEeCCCCCCccccc
Confidence 9999999999999999999998888888899999999955677789999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC----CCcEEEEeccccccCCCcceeEEEEccCC-----cHHH
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSE-----VEGF 253 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~-----~~~~ 253 (400)
.+.|++|+++|+++++++|.||+|+++.|++.++..+. --.++.++|+||.|=+||||+||++..|. ....
T Consensus 218 ~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~ 297 (447)
T KOG0259|consen 218 EDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKV 297 (447)
T ss_pred HHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHH
Confidence 99999999999999999999999999999988876653 24567899999999889999999988873 2334
Q ss_pred HHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCCC--
Q 015768 254 ATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEK-- 329 (400)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~-- 329 (400)
.+.+..... .+.+++++.|.|+-.-|++ .++++.+...-++++.+...+.|++++++. ...|++.+|+|++++-.
T Consensus 298 ~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~ 376 (447)
T KOG0259|consen 298 VQGIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLF 376 (447)
T ss_pred HHHHHHHHh-ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhh
Confidence 455555543 3567899999999999986 447889999999999999999999999977 67899999999987642
Q ss_pred --CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 330 --HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 330 --~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
..++..|+..|.++..+.+.||..|+.++|+|++++. ..+.++++..||+.+.....++
T Consensus 377 ~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~-~~~~leea~~Rik~Fc~RH~~~ 437 (447)
T KOG0259|consen 377 PDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITV-EEEMLEEAFSRIKEFCDRHSKE 437 (447)
T ss_pred ccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEcc-ChHHHHHHHHHHHHHHHhhhhc
Confidence 3478899999999999999999999999999999996 8899999999999999888743
No 39
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=4.4e-47 Score=359.55 Aligned_cols=353 Identities=28% Similarity=0.436 Sum_probs=295.8
Q ss_pred hcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHH
Q 015768 27 RGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQA 101 (400)
Q Consensus 27 ~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a 101 (400)
+.+.++++|+.|.| ++++++.+.+++.+.+... ...|++..|..++|+++++++.+.+| +++++|++|+|++++
T Consensus 27 ~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 105 (398)
T PRK08363 27 KKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEA 105 (398)
T ss_pred hcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 45689999999998 6788999999998887654 45688889999999999999988776 578999999999999
Q ss_pred HHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
+..++.+++++||+|+++.|+|.++...++..|..++.+.+.+++++.+|++.+++.+.+++ +++++++|+||||.++
T Consensus 106 l~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~p~NPtG~~~ 183 (398)
T PRK08363 106 LQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKT--KAIAVINPNNPTGALY 183 (398)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcce--EEEEEECCCCCCCcCc
Confidence 99999999999999999999999999999999998887733556777889999999887655 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcceeEEEEc--cCCcHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQ 256 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~--~~~~~~~~~~ 256 (400)
+.+++++|+++|+++|+++|+||+|..+.+.+.... .....++++++||||.++++|+|+||++. + +++++.
T Consensus 184 ~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~---~~~~~~ 260 (398)
T PRK08363 184 EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDP---EGKLAE 260 (398)
T ss_pred CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCc---HHHHHH
Confidence 999999999999999999999999998877543211 11234689999999999899999999987 4 555555
Q ss_pred HHHhhc---cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC-CCC
Q 015768 257 LLKVQD---NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK-HLD 332 (400)
Q Consensus 257 l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 332 (400)
+..... ...++++.+.+.++..+|....+++.+.++.++++++.+.+.|++++.+.+..|.+++|+|++++.. ..+
T Consensus 261 l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~ 340 (398)
T PRK08363 261 VREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKD 340 (398)
T ss_pred HHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCC
Confidence 543322 1246788999999999997656788888999999999999999988666777888899999988752 124
Q ss_pred HHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
..+++.++++++||.+.||..|+. ++++|++++. +++++++++++|++++++.
T Consensus 341 ~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 341 DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP-PVEILEEAMDRFEEFMRER 395 (398)
T ss_pred HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 566766776789999999998863 5799999985 8899999999999998774
No 40
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8e-47 Score=358.33 Aligned_cols=373 Identities=25% Similarity=0.413 Sum_probs=309.7
Q ss_pred hhHHHHhhhcCchHHHHHHHHHh----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
|++++|+.......+.++..+.+ .+.++++|+.|.+++++++.+.+++.+.... ...|++..|.+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~~g~~~lr~~ia~~ 78 (397)
T PRK07568 1 MKISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSHSQGIPELREAFAKY 78 (397)
T ss_pred CchhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCCCCCCHHHHHHHHHH
Confidence 56788887776666666655432 3467999999999998889999998876543 56798889999999999999
Q ss_pred HHhhc-CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCC-CHHHHHH
Q 015768 81 LNQEN-KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHP-DADWLEK 157 (400)
Q Consensus 81 l~~~~-~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~-~~e~l~~ 157 (400)
+.... ++++++|++|+|+++++..++.++.++||+|++++|+|..+...++..|++++.+ +.+ ++|+.. +++.+++
T Consensus 79 ~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~g~~~~~~~~l~~ 157 (397)
T PRK07568 79 YKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPV-TTKIEEGFHLPSKEEIEK 157 (397)
T ss_pred HHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEe-ecCcccCCCCCCHHHHHH
Confidence 97432 4578999999999999999999999999999999999999988889999999999 876 445543 5789999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcEEEEecccc
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHVVNLFSFSK 232 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~i~~~s~sK 232 (400)
.+++++ ++|++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+.+.... .. ..+++++++|+||
T Consensus 158 ~~~~~~--~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK 235 (397)
T PRK07568 158 LITPKT--KAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSK 235 (397)
T ss_pred hcCccc--eEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchh
Confidence 887655 8999999999999999999999999999999999999999999887653221 11 1467899999999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768 233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 312 (400)
Q Consensus 233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (400)
.+|++|+|+||+++++ +++++.+..... ..++++.+.|.++..+++..+++.++.++.++++++.+.+.|++++++.
T Consensus 236 ~~~~~G~R~G~~~~~~--~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (397)
T PRK07568 236 RYSACGARIGCLISKN--KELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVV 312 (397)
T ss_pred hccCCCcceEEEecCC--HHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 9998999999999864 677777765443 2467889999999999986667888888999999999999999886667
Q ss_pred ccCCCCceEEEeeCCCCCCCHHHHHHHHHHh-----cCeEEeCCCccC-----CCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACG-----CRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~v~~g~~~~-----~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
+..|.+++|+|++++.. +..++..+++++ +||.+.||..|+ .++++||+++. +++++++++++|.++
T Consensus 313 ~~~p~g~~~~~~~l~~~--~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~-~~~~~~~~~~~l~~~ 389 (397)
T PRK07568 313 CEKPKGAFYIIAKLPVD--DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL-NEEDLKRAMEILKEA 389 (397)
T ss_pred ecCCCcceEEEEecCCC--CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC-CHHHHHHHHHHHHHH
Confidence 77888889999999753 567888888754 699999998873 24699999986 789999999999999
Q ss_pred HHHHhc
Q 015768 383 LEELVK 388 (400)
Q Consensus 383 l~~~~~ 388 (400)
++++..
T Consensus 390 l~~~~~ 395 (397)
T PRK07568 390 LEKYNK 395 (397)
T ss_pred HHHhhc
Confidence 987653
No 41
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-47 Score=358.63 Aligned_cols=368 Identities=29% Similarity=0.481 Sum_probs=306.3
Q ss_pred HHHhhhcCchHHHHHHHHH----hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768 8 AKRALETEMPIMVQIQELV----RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
++|+.......+.++...+ +.+++.++|+.++++..+++.+.+++.+.+.......|++..|.+++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (386)
T PRK07550 3 NPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSR 82 (386)
T ss_pred chhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHH
Confidence 3455543344445544443 445789999999998888889999888877554456798889999999999999998
Q ss_pred hcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc
Q 015768 84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE 160 (400)
Q Consensus 84 ~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~ 160 (400)
.+| +++++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.+ +.++ +++.+|++.+++.++
T Consensus 83 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~l~~~~~ 161 (386)
T PRK07550 83 LYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYL-PCDEGPGLLPDPAAAEALIT 161 (386)
T ss_pred HhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEE-ecCCCcCCCCCHHHHHHHhc
Confidence 876 568999999999999999999999999999999999999999999999999999 8874 577789999999987
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-cc--c--CCCcEEEEeccccccC
Q 015768 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-CC--V--EGDHVVNLFSFSKAYG 235 (400)
Q Consensus 161 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-~~--~--~~~~~i~~~s~sK~~g 235 (400)
.++ +++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.++.... .. . ..++++++.|+||.+|
T Consensus 162 ~~~--~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 239 (386)
T PRK07550 162 PRT--RAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA 239 (386)
T ss_pred ccC--cEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence 654 899999999999999999999999999999999999999999886543211 11 1 2457899999999999
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (400)
++|+|+||++++ +++++.+.........+++.+.+.++..+++...++.++.++.+.++++.+.+.|+++..+.+.
T Consensus 240 ~~G~RiG~i~~~---~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 315 (386)
T PRK07550 240 LTGHRVGAVVAS---PARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL- 315 (386)
T ss_pred CcccceEeeecC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-
Confidence 899999999998 7888888877766667788999999999998645777888888999999999999887443433
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
+.+++|+|++++....+..+++.+|++++||.+.||..|+. .+++||+++..+++++++++++|.++
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 316 ASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred CCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 55789999999863347888999888789999999998863 57999999876789999999999875
No 42
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=4.2e-47 Score=366.66 Aligned_cols=354 Identities=24% Similarity=0.375 Sum_probs=289.0
Q ss_pred CCCeEEcCCCCCC----------------CCC-------------cHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHH
Q 015768 29 AKNAVSLAQGVVY----------------WQP-------------PKMAMEKVKELVWDP--SISKYGADEGLPELRDAL 77 (400)
Q Consensus 29 ~~~~i~~~~~~~~----------------~~~-------------~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~ 77 (400)
+.++|+++.|+|+ +.. |..+++++.+++... ....|++..|.+++|+++
T Consensus 45 ~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ai 124 (481)
T PTZ00377 45 FDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAV 124 (481)
T ss_pred cceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHH
Confidence 4799999999995 644 457888877666542 356799999999999999
Q ss_pred HHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHH
Q 015768 78 VKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDAD 153 (400)
Q Consensus 78 a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e 153 (400)
++++.+.+|+ ++++|++|+|+++++..++.+++ ++||.|+++.|+|+.+...++..|.+++.+ |.++ ++|.+|++
T Consensus 125 a~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v-~~~~~~~~~~d~~ 203 (481)
T PTZ00377 125 AAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPY-YLDEEKGWSLDQE 203 (481)
T ss_pred HHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEE-EeccccCCCCCHH
Confidence 9999987764 58999999999999999999998 799999999999999999999999999999 8874 57889999
Q ss_pred HHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC-CCccc-------cCC
Q 015768 154 WLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG-RKHCC-------VEG 221 (400)
Q Consensus 154 ~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~~-------~~~ 221 (400)
.+++.+++. ..+|++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++ .++.. ...
T Consensus 204 ~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~ 283 (481)
T PTZ00377 204 ELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPA 283 (481)
T ss_pred HHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcc
Confidence 999988631 135999999999999999999999999999999999999999999988742 22211 111
Q ss_pred -----CcEEEEeccccc-cCCCcceeEEEEc---cCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC---Cc----H
Q 015768 222 -----DHVVNLFSFSKA-YGMMGWRVGYIAY---PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GP----E 285 (400)
Q Consensus 222 -----~~~i~~~s~sK~-~g~~g~~~G~i~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~----~ 285 (400)
.++++++|+||. ++++|+|+||++. + +++++++.+... ...+++.+.|.++..+++. +. .
T Consensus 284 ~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p---~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~ 359 (481)
T PTZ00377 284 EYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP---PEVREQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPL 359 (481)
T ss_pred cccCCeEEEEEecCCcccccCCcCceEEEEEeCCC---HHHHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHH
Confidence 257899999997 5889999999986 5 788888887664 3446889999999999963 11 1
Q ss_pred HHH---HHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC--CC---------CCHHHHHHHHHHhcCeEEeCC
Q 015768 286 WVT---ERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE--KH---------LDDFEVVRWLAHRHGVVVIPG 351 (400)
Q Consensus 286 ~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~--~~---------~~~~~~~~~l~~~~gi~v~~g 351 (400)
+.. +..+.++++++.+.+.|++++++.+..|++++|+|++++. .. .+...++.++++++||.+.||
T Consensus 360 ~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG 439 (481)
T PTZ00377 360 YKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPG 439 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCC
Confidence 323 3334568888999999999866788889989999977641 11 123456677888899999999
Q ss_pred CccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 352 GACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 352 ~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
..|+. .+++|+|++ .+++++++++++|.++++++.+
T Consensus 440 ~~F~~~~~~~~~Rls~~-~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 440 SGFGQKPGTYHFRITIL-PPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred cccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 99973 469999999 5889999999999999998765
No 43
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-47 Score=358.13 Aligned_cols=347 Identities=21% Similarity=0.332 Sum_probs=294.9
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC---CCCC-cEEEeCChHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK---LYKS-SVMVTAGANQAFVN 104 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~---~~~~-~i~~~~g~t~a~~~ 104 (400)
+.++++|+.|++++++++.+++++.+.+.......|+ ..|...+|+++++++.+.+| ++++ +|++|+|+++++..
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~ 121 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM 121 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence 5579999999999988899999988876544355685 48999999999999988776 4565 79999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~ 183 (400)
++.+++++||+|+++.|+|+.+...++..|++++.+ |.+++ ++.+|++.+++.+..++ ++|++++||||||.+++.
T Consensus 122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~l~~~~~~~~--k~i~l~nP~NPTG~v~s~ 198 (410)
T PRK06290 122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNL-PLLEENNFLPDLDSIPKDIKEKA--KLLYLNYPNNPTGAVATK 198 (410)
T ss_pred HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEE-ecCCCcCCcCCHHHHHHhhcccc--eEEEEECCCCCCCcCCCH
Confidence 999999999999999999999999999999999999 88764 57789999998887654 999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+++++|+++|++||++||+||+|..+.+++.+.. .. ..+++++++||||.+|++|+|+||++.+ +++++.+..
T Consensus 199 e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~---~~l~~~l~~ 275 (410)
T PRK06290 199 EFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN---ELIVKAFAT 275 (410)
T ss_pred HHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC---HHHHHHHHH
Confidence 9999999999999999999999999887542211 11 2357799999999999999999999998 788888887
Q ss_pred hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC------CCH
Q 015768 260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH------LDD 333 (400)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 333 (400)
.......+.+.+.|.++..+|+. .++.++.++.+.++++.+.+.|++++ +.+..|++++++|++++... .+.
T Consensus 276 ~~~~~~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~p~g~f~l~v~lp~~~~~~~~~~~~ 353 (410)
T PRK06290 276 VKDNNDSGQFIAIQKAGIYALDH-PEITEKIREKYSRRLDKLVKILNEVG-FKAEMPGGTFYLYVKAPKGTKSGIKFENA 353 (410)
T ss_pred HHhccccCCcHHHHHHHHHHhhC-cHHHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCeeeEEEEECCCccccCCCCCCH
Confidence 77655666677899999999986 46778888999999999999999986 47777888999999998542 257
Q ss_pred HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+++++|+++.++.+.||..| ++++||+++. .++++.++.++.|+++|..+
T Consensus 354 ~~~~~~Ll~~~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 354 EEFSQYLIKEKLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred HHHHHHHHHhCCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 789999987667888888755 4799999984 47888889999998888764
No 44
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=6.8e-47 Score=358.63 Aligned_cols=355 Identities=18% Similarity=0.235 Sum_probs=295.0
Q ss_pred hcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHH
Q 015768 27 RGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQA 101 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a 101 (400)
+.++++++|+.|.++ +++++.+.+++.+.+.......|++..|..++|+++++++.+..+ +++++|++|+|++++
T Consensus 28 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~a 107 (401)
T TIGR01264 28 NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHA 107 (401)
T ss_pred hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHH
Confidence 335789999999975 678899999998887765456798889999999999999976432 568999999999999
Q ss_pred HHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~ 180 (400)
+..++.+++++||+|+++.|+|..+...++..|++++.+ +.+.+ ++.+|++.+++.++.++ +++++++|+||||.+
T Consensus 108 l~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~NPtG~~ 184 (401)
T TIGR01264 108 IEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLY-NLLPDKSWEIDLKQLESLIDEKT--AALIVNNPSNPCGSV 184 (401)
T ss_pred HHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEe-ecCCccCCCCCHHHHHHHhccCc--eEEEEcCCCCCCCCC
Confidence 999999999999999999999999999999999999988 77543 56789999999887655 899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC-CCcEEEEeccccccCCCcceeEEEEccCCc---HHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV---EGF 253 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~---~~~ 253 (400)
++.+++++|+++|+++|+++|+||+|..+.+.+.... ... ..++++++||||.|+++|+|+||++.++.. .++
T Consensus 185 ~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~ 264 (401)
T TIGR01264 185 FSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDI 264 (401)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHH
Confidence 9999999999999999999999999999987653221 112 235899999999999999999999987421 134
Q ss_pred HHHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---
Q 015768 254 ATQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK--- 329 (400)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--- 329 (400)
++.+..... ..++++.+.|.++..+|.+. ++++++.++.++++++.+.+.|++++++.+..|.+++|+|++++..
T Consensus 265 ~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~ 343 (401)
T TIGR01264 265 RDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFP 343 (401)
T ss_pred HHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccC
Confidence 444444332 24567889999999999752 4778888999999999999999998555667788899999997531
Q ss_pred -CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 330 -HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 330 -~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
..+..+++..+++++||.+.||..|+.++++|++++. +++++++++++|.++++++
T Consensus 344 ~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 344 EFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV-PVVMMEEACSRIQEFCERH 400 (401)
T ss_pred CCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHhcc
Confidence 1246778888877899999999998878999999996 7899999999999988653
No 45
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=3.2e-46 Score=352.54 Aligned_cols=364 Identities=25% Similarity=0.380 Sum_probs=305.6
Q ss_pred HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-
Q 015768 10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY- 88 (400)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~- 88 (400)
++...+.+.+..+.+..+. ++.++|+.|.++.+.|+.+++++.+.+... ...|++..|..++|+++++++.+.+|++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~ 82 (387)
T PRK07777 5 RLRPFGTTIFAEMSALAVR-TGAVNLGQGFPDEDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEY 82 (387)
T ss_pred hhhhcCccHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4545555566666666544 588999999988877788888888877654 4679888999999999999998888764
Q ss_pred -CC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--CCCCCHHHHHHhhccCCC
Q 015768 89 -KS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPT 164 (400)
Q Consensus 89 -~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l~~~~~ 164 (400)
++ +|++|+|+++++..++.++.++||+|+++.|+|+++..+++..|.+++.+ +.+++ ++.+|++++++.+.+++
T Consensus 83 ~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~~~~~~- 160 (387)
T PRK07777 83 DPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPV-PLVPDGRGFALDLDALRAAVTPRT- 160 (387)
T ss_pred CCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEe-ecCCccCCCcCCHHHHHHhcCccc-
Confidence 54 79999999999999999999999999999999999999999999999988 87765 46789999999887654
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccccccCCCcc
Q 015768 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~g~~g~ 239 (400)
++|++++|+||||.+++.+++++|+++|++|++++|+||+|..+.+.+..... . ..+++++++|+||.+|++|+
T Consensus 161 -~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK07777 161 -RALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGW 239 (387)
T ss_pred -EEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCc
Confidence 99999999999999999999999999999999999999999988875432211 1 14578999999999999999
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 319 (400)
|+||++.+ +++++.+.......++..+.+.+.++..++.....|.+++++.++++++.+.+.|++++ +.+..+.++
T Consensus 240 RiG~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~g~ 315 (387)
T PRK07777 240 KIGWACGP---APLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEAG-FEVHDSAGT 315 (387)
T ss_pred eeEEEecC---HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCC-CCccCCCcc
Confidence 99999998 78888888776655667788888888888886678888889999999999999999875 477778889
Q ss_pred eEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccCC-----CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 320 ~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
+|+|++++. ...+..+++.+|++++||.+.||..|+. ++++||+++. +++++++++++|.++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~-~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 316 YFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK-RDDTLDEAIRRLRALR 384 (387)
T ss_pred eEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 999999763 2236788999998789999999998752 4689999997 8999999999998754
No 46
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-46 Score=350.53 Aligned_cols=334 Identities=20% Similarity=0.243 Sum_probs=279.6
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~ 105 (400)
++.++++|+.|++++++++.+.+++.+.... ...|++..|..++|+++++++++++| +++++|++|+|+++++..+
T Consensus 22 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~ 99 (374)
T PRK05839 22 KEYKGLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNF 99 (374)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHH
Confidence 3679999999999998888888888876543 67798889999999999999998877 5799999999999999999
Q ss_pred HHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768 106 VLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 106 ~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~ 182 (400)
+.+++ ++||.|+++.|+|+.+...++..|++++.+ |.++ +++.++.+..+ + ++ +|++++++||||||.+++
T Consensus 100 ~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~~~~~~d~~~~~--~-~~--~k~v~i~nP~NPTG~~~s 173 (374)
T PRK05839 100 PQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLM-PLTKENDFTPSLNEKE--L-QE--VDLVILNSPNNPTGRTLS 173 (374)
T ss_pred HHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEe-ecccccCCcCCcchhh--h-cc--ccEEEEeCCCCCcCcccC
Confidence 88764 578999999999999999999999999999 8874 45766654432 2 23 599999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---------cCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 253 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---------~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~ 253 (400)
.+++++|+++|++||+++|+||+|..+.++...... ...+++++++||||.||++|+|+||++.+ +++
T Consensus 174 ~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~---~~~ 250 (374)
T PRK05839 174 LEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD---ASI 250 (374)
T ss_pred HHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC---HHH
Confidence 999999999999999999999999987654321111 12368999999999999999999999998 788
Q ss_pred HHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768 254 ATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333 (400)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (400)
++++.........+.+.+.|.++..++.. .++.++.++.+.++++.+.+.|. . . .|.+++|+|++++ +.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~---~-~--~p~gg~fi~~~~~----~~ 319 (374)
T PRK05839 251 LKKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREILG---I-T--IPPATFYVWLPVD----ND 319 (374)
T ss_pred HHHHHHHHhhcCCCCChHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHhcC---C-C--CCCeeEEEEEeCC----Ch
Confidence 88888776555567788889888877764 57788888889999888888762 2 2 5677999999997 35
Q ss_pred HHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
.++..++++++||.+.||..|+. ++++|||++. +++++.+++++|+++++
T Consensus 320 ~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~-~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 320 EEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY-DTPKLEKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHhh
Confidence 68888887679999999987763 5899999986 89999999999998874
No 47
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=7.6e-46 Score=350.57 Aligned_cols=353 Identities=23% Similarity=0.388 Sum_probs=297.7
Q ss_pred HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC-cEEEeCChHHH
Q 015768 25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMVTAGANQA 101 (400)
Q Consensus 25 ~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~-~i~~~~g~t~a 101 (400)
..+.++++++|+.|+++...++.+++++.+.+.......|++..|.+++|+++++++.+.+|+ +++ ++++|+|++++
T Consensus 24 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~ 103 (395)
T PRK08175 24 ARRRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG 103 (395)
T ss_pred HHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 345578999999999888777888888888776555678988999999999999999987765 465 79999999999
Q ss_pred HHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccC
Q 015768 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~ 180 (400)
+..++..+++|||+|++++|+|+.+...++..|++++.+ |.++++. ..+++++.++.. ..++++++++|+||||.+
T Consensus 104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~--~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~ 180 (395)
T PRK08175 104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSV-PLVEGVD--FFNELERAIRESYPKPKMMILGFPSNPTAQC 180 (395)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEE-ecccCCC--cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence 999999999999999999999999998889999999999 8876542 478888877632 235899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
++.+++++|+++|++||+++|+||+|..+.+++..... . ..+.+++++|+||.+|++|+|+||++.+ +++++
T Consensus 181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~---~~l~~ 257 (395)
T PRK08175 181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN---PELVS 257 (395)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC---HHHHH
Confidence 99999999999999999999999999988875432211 1 1356788999999999999999999988 78999
Q ss_pred HHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC--CCH
Q 015768 256 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH--LDD 333 (400)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 333 (400)
++.+......++++.+.+.++..++.....+++++++.++++++.+.+.|+.++. .+..|.+++|+|++++... .+.
T Consensus 258 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~p~~g~~i~i~l~~~~~~~~~ 336 (395)
T PRK08175 258 ALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGW-MVEMPKASMYVWAKIPEPYAAMGS 336 (395)
T ss_pred HHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcCC-cccCCCEEEEEEEECCcccCCCCH
Confidence 8887776566777888899888888765677888889999999999999999864 6777778999999998643 246
Q ss_pred HHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.+++.++++++||.+.||..|+. ++++||+++. +.+.+.+++++|.+++.+
T Consensus 337 ~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~-~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 337 LEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIE-NRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred HHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCC-CHHHHHHHHHHHHHHHHh
Confidence 78888887789999999988853 5699999984 899999999999999864
No 48
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.6e-46 Score=359.86 Aligned_cols=351 Identities=21% Similarity=0.313 Sum_probs=286.6
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhc-----C------CCCCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEE
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVW-----D------PSISKYGADEGLPELRDALVKKLNQENK----LYKSSVMV 94 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~-----~------~~~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~ 94 (400)
.++|+|+.++|.+.. ..+.+.+.+... . .....|++..|.+.+|+++++++.+.++ +++++|++
T Consensus 38 ~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVL 116 (468)
T ss_pred CeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEE
Confidence 469999999988764 444444444321 0 1244588888999999999999988765 57899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEeccCC-CCCCCCCHHHHHHhhcc----CCCCeEE
Q 015768 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCS-SKTLHPDADWLEKTLET----KPTPKLV 168 (400)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~----~~~~~~v 168 (400)
|+|+++++..++.++++|||.|++++|+|+++...+. ..|++++.+ |.+ ++++.++++.+++.+.. ...+|+|
T Consensus 117 t~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v-~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v 195 (468)
T PLN02450 117 TAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPI-HCSSSNGFQITESALEEAYQQAQKLNLKVKGV 195 (468)
T ss_pred ccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEE-ecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence 9999999999999999999999999999999988887 589999999 876 56788899999988753 2236999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-------------cCCCcEEEEeccccccC
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-------------VEGDHVVNLFSFSKAYG 235 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-------------~~~~~~i~~~s~sK~~g 235 (400)
++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+.+.++.. ...+++++++||||.+|
T Consensus 196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~ 275 (468)
T PLN02450 196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG 275 (468)
T ss_pred EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence 99999999999999999999999999999999999999988776532211 02468999999999999
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGA 312 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (400)
++|+|+||+++++ +.+.+.+.+... ...++.+.|.++..+|+++. .++.+.++.++++++.+.+.|++++ +.
T Consensus 276 l~GlRiG~li~~~--~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~g-i~ 350 (468)
T PLN02450 276 LPGFRVGAIYSND--EMVVSAATKMSS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAG-IK 350 (468)
T ss_pred CCCccEEEEEECC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence 9999999999985 455666555432 23468899999999998743 3677888999999999999999985 47
Q ss_pred ccCCCCceEEEeeCCCCCC-----CHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 313 VKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+..+.+++|+|++++.... +..++..++++++||.+.||..|+. ++|+||+++..+++++++++++|++++.+
T Consensus 351 ~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 351 CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVES 430 (468)
T ss_pred ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 7788889999999874321 1245777788789999999998863 68999999976789999999999999987
Q ss_pred Hh
Q 015768 386 LV 387 (400)
Q Consensus 386 ~~ 387 (400)
..
T Consensus 431 ~~ 432 (468)
T PLN02450 431 DS 432 (468)
T ss_pred cc
Confidence 65
No 49
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=5.4e-46 Score=346.14 Aligned_cols=337 Identities=23% Similarity=0.355 Sum_probs=288.9
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC-cEEEeCChHHHHHHHHHH
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS-SVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~-~i~~~~g~t~a~~~~~~~ 108 (400)
+++|+.|++++++++.+.+++.+.... ...|+++.|..++|+++++++.+.+|+ +++ +|++|+|+++++..++.+
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~ 79 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLV 79 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHH
Confidence 689999999998899999999887653 667988889999999999999988774 566 899999999999999999
Q ss_pred hcCCC---CEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 109 LCDAG---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 109 l~~~g---d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
++++| |+|+++.|+|+.+...++..|++++.+ +.+ ++|+.+|++.+++++.+++ +++++++|+||||.+++.+
T Consensus 80 ~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~~~~~~--~~i~i~~p~NPtG~~~~~~ 156 (350)
T TIGR03537 80 FIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAV-KLKKEDGFLLRLEKVEKSILEET--KIVWINYPHNPTGATAPRS 156 (350)
T ss_pred HcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEc-ccCcccCCccCHHHHHHhhhhcc--EEEEEeCCCCCcCcccCHH
Confidence 99887 699999999999999999999999999 887 4678889999999887655 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 262 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~ 262 (400)
++++|+++|++||+++|+||+|..+.++..... ....+++++++|+||.+|++|+|+||++.+ +++.+.+.....
T Consensus 157 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~---~~~~~~~~~~~~ 233 (350)
T TIGR03537 157 YLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGD---EKLISFLRKLRA 233 (350)
T ss_pred HHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecC---HHHHHHHHHHHH
Confidence 999999999999999999999998766543221 123468899999999999999999999987 788888887766
Q ss_pred cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHH
Q 015768 263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
....+.+.+.+.++..++.. .++..+.++.++++++.+.+.|++.+. .+..+.+++|+|++++.. .+..+++++|.
T Consensus 234 ~~~~~~~~~~q~~~~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~~g~-~~~~~~g~~~~~~~~~~~-~~~~~l~~~L~- 309 (350)
T TIGR03537 234 NFGVASPDFVQAAAKAAWSD-DNHVLERRKIFKRKRDLFIEFFNKVGL-EYLYPDATFYLWVKVPSG-IDAKDYALRLL- 309 (350)
T ss_pred hhccCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCeEEEEEEECCCC-CCHHHHHHHHH-
Confidence 55666666778877777764 567788888999999999999998864 777788889999999864 36788898886
Q ss_pred hcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 343 RHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 343 ~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
++||.+.||..|+. ++++|++++ .+++++++++++|++
T Consensus 310 ~~gv~v~~g~~f~~~~~~~~Ri~~~-~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 310 ENGIVVAPGENFGSGEEGYVRVALV-PTLEECEEALRLWER 349 (350)
T ss_pred HCCEEEcCchhhCCCCCCEEEEEec-CCHHHHHHHHHHHhc
Confidence 68999999998864 689999998 488999999998875
No 50
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.2e-45 Score=349.92 Aligned_cols=357 Identities=22% Similarity=0.290 Sum_probs=296.7
Q ss_pred HHhcCCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCCh
Q 015768 25 LVRGAKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGA 98 (400)
Q Consensus 25 ~~~~~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~ 98 (400)
....++++++|+.|++. +++++.+++++.+.+.......|++..|..++|+++++++....+ +++++|++|+|+
T Consensus 26 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~ 105 (403)
T TIGR01265 26 KPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGC 105 (403)
T ss_pred HHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCh
Confidence 33457899999999874 678899999999888765456798889999999999999987654 467899999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768 99 NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (400)
Q Consensus 99 t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt 177 (400)
|+++..++.++.++||+|+++.|+|..+...++..|++++.+ +.++ +++.+|++.+++.+.+++ +++++++|+|||
T Consensus 106 t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~~~~~~--~~v~i~~p~NPt 182 (403)
T TIGR01265 106 SQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLY-DLLPEKDWEIDLDGLEALADEKT--VAIVVINPSNPC 182 (403)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-cCCcccCCccCHHHHHHHhCcCc--cEEEEecCCCCC
Confidence 999999999999999999999999999999999999999988 7754 456789999999887665 899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c-CCCcEEEEeccccccCCCcceeEEEEccCCcH--
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-- 251 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~-- 251 (400)
|.+++.+++++|+++|+++|+++|+|++|..+.+++.+... . ...++++++||||.|+++|+|+||++.+++.+
T Consensus 183 G~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~ 262 (403)
T TIGR01265 183 GSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIF 262 (403)
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhh
Confidence 99999999999999999999999999999999876533211 1 23468999999999989999999998753101
Q ss_pred --HHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC
Q 015768 252 --GFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 328 (400)
Q Consensus 252 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 328 (400)
++.+.+..... ...+++.+.|.++..+++. ...++.+.++++.++++.+.+.|+.++++.+..|.+++|+|++++.
T Consensus 263 ~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~ 341 (403)
T TIGR01265 263 RDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLEL 341 (403)
T ss_pred HHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccc
Confidence 13344443332 2456788999999999975 3467888889999999999999998865566778889999999975
Q ss_pred CC----CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 329 KH----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 329 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.. .+..+++.++++++||.+.||..|+.++++||+++. +++.+++++++|.++++++
T Consensus 342 ~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~-~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 342 ELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV-PESMLEEACSRIKEFCERH 402 (403)
T ss_pred cccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 31 256788888777899999999999888999999996 7899999999999988654
No 51
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=2.1e-45 Score=348.53 Aligned_cols=372 Identities=22% Similarity=0.326 Sum_probs=292.3
Q ss_pred HHHHhhhcCchHH----HHHHHHHhcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHH
Q 015768 7 LAKRALETEMPIM----VQIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVK 79 (400)
Q Consensus 7 ~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~ 79 (400)
-++++.....+.. ....+...+++++++|+.|++ ++++++.+.+++.+.+.. ...|++..|.+++|+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~ 83 (404)
T PRK09265 6 KSSKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQ 83 (404)
T ss_pred hhHHHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHH
Confidence 3455554432333 333334456789999999986 456788999988877654 4679888999999999999
Q ss_pred HHHhhc--CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHH
Q 015768 80 KLNQEN--KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLE 156 (400)
Q Consensus 80 ~l~~~~--~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~ 156 (400)
++.+.. ++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.+ +.+. +++.+|.+.++
T Consensus 84 ~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~-~~~~~~~~~~d~~~l~ 162 (404)
T PRK09265 84 YYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHY-LCDEEAGWFPDLDDIR 162 (404)
T ss_pred HHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEE-ecccccCCCCCHHHHH
Confidence 997665 4678999999999999999999999999999999999999999999999998888 7654 45778999999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c-CCCcEEEEecccc
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V-EGDHVVNLFSFSK 232 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~-~~~~~i~~~s~sK 232 (400)
+.+.+++ ++|++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++..... . ...++++++|+||
T Consensus 163 ~~~~~~~--~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK 240 (404)
T PRK09265 163 SKITPRT--KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSK 240 (404)
T ss_pred Hhccccc--eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchh
Confidence 9887655 99999999999999999999999999999999999999999998876533211 1 2235788999999
Q ss_pred ccCCCcceeEEEEccCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHH---HHHHHHHHHHHHHHh
Q 015768 233 AYGMMGWRVGYIAYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTER---VKDLVRNREIIREAL 305 (400)
Q Consensus 233 ~~g~~g~~~G~i~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~l~~~L 305 (400)
.+|++|+|+||++.+.+ ++ +++.+... .....+++.+.|.++..+|...+ +..+. .+.+.++++.+.+.|
T Consensus 241 ~~~~pGlRiG~~v~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~r~~~~~~L 317 (404)
T PRK09265 241 AYRVAGFRVGWMVLSGP-KKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQ-SINELILPGGRLYEQRDRAWELL 317 (404)
T ss_pred hccCcccceEEEEEeCc-hHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 99989999999996421 33 33444322 22356778899999999997432 22222 346777788899999
Q ss_pred ccCCCCcccCCCCceEEEeeCCCCC---CCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHH
Q 015768 306 SPLGEGAVKGGEGAIYLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
++++++.+..|.+++|+|++++... .+..+++.+++.++||.+.||..|+ .++++|++++. +++++++++++|+
T Consensus 318 ~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~-~~e~l~~~l~rl~ 396 (404)
T PRK09265 318 NAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLP-RVDDLEEAIGRIG 396 (404)
T ss_pred hcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCC-CHHHHHHHHHHHH
Confidence 8886667788888999999987531 1344555556679999999999885 36899999974 8999999999999
Q ss_pred HHHHHHh
Q 015768 381 RGLEELV 387 (400)
Q Consensus 381 ~~l~~~~ 387 (400)
++++.+.
T Consensus 397 ~~l~~~~ 403 (404)
T PRK09265 397 RFLSGYR 403 (404)
T ss_pred HHHHHhc
Confidence 9998653
No 52
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.2e-45 Score=350.73 Aligned_cols=339 Identities=24% Similarity=0.401 Sum_probs=277.5
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF 102 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~ 102 (400)
++++++|+.|++++++++.+.+++.+.+... ....|++..|.+++|+++++++.+.+| +++++|++|+|+++++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al 112 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT 112 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence 5679999999999998999999998887652 356798889999999999999877764 5789999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcE-----------EEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEE
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-----------HILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSV 170 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l 170 (400)
..+. .+..|||+|++++|+|+.+...++..|.+ ++.+ |.++ +++.++.+. + .+|+|++
T Consensus 113 ~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v-~~~~~~~~~~d~~~------~--~~k~i~l 182 (409)
T PRK07590 113 GNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYL-PCTAENNFVPELPE------E--KVDIIYL 182 (409)
T ss_pred HHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEe-ecccccCCcccCcc------c--CceEEEE
Confidence 9865 45689999999999999999999999986 8888 8764 345444321 2 3599999
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC--CCcEEEEeccccccCCCcceeEEEE
Q 015768 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE--GDHVVNLFSFSKAYGMMGWRVGYIA 245 (400)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~--~~~~i~~~s~sK~~g~~g~~~G~i~ 245 (400)
++||||||.+++.+++++|+++|++||++||+||+|..+.+++.... ... .+++++++||||.+|++|+|+||++
T Consensus 183 ~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i 262 (409)
T PRK07590 183 CFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTV 262 (409)
T ss_pred eCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEE
Confidence 99999999999999999999999999999999999999887553211 111 2468999999999999999999999
Q ss_pred ccCCcHHHHHHH-----------HHhhccCC-cCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768 246 YPSEVEGFATQL-----------LKVQDNIP-ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA 312 (400)
Q Consensus 246 ~~~~~~~~~~~l-----------~~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (400)
++ +++++.+ ........ .+++.+.|.++..++.. +.+++++.++.++++++.+.+.|++++ +.
T Consensus 263 ~~---~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~ 338 (409)
T PRK07590 263 VP---KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FE 338 (409)
T ss_pred cC---HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence 98 6776621 11111122 35788999999888874 446788889999999999999999985 46
Q ss_pred ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
+..+.+++|+|++++.. .+..+++.++++++||.+.||..|+. .+++||++.. +++++++++++|++++
T Consensus 339 ~~~~~g~~f~wi~~~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 339 VYGGVNAPYIWVKTPDG-MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFG-SRENVLEAMERIKKAL 409 (409)
T ss_pred eecCCcceEEEEECCCC-CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccC-CHHHHHHHHHHHHhhC
Confidence 77777899999999864 35678888888788999999998864 4799999764 8999999999998753
No 53
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=6.4e-46 Score=354.87 Aligned_cols=338 Identities=20% Similarity=0.220 Sum_probs=285.9
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.+.++|+.|.++.+++|.+.+++.+.... ...|++..|..++++++++++.+..+ ++++|++|+|+++++..++.++
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~-~~~~Iiit~G~~~al~~~~~~l 161 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP-VAFEIDLTSGAIDAIERLLCAH 161 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC-CcCeEEEecCcHHHHHHHHHHh
Confidence 45788999987776667777777765543 45698889999999999999876433 4579999999999999999999
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKR 188 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l~~ 188 (400)
++|||.|++++|+|+.+...++..|++++.+ |.+++| ++++.+++.++.+ +|+++++ +||||||.+++.+++++
T Consensus 162 ~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~g--~~~~~l~~~~~~~--~k~i~~~p~p~NPTG~~~s~~~~~~ 236 (431)
T PRK15481 162 LLPGDSVAVEDPCFLSSINMLRYAGFSASPV-SVDAEG--MQPEKLERALAQG--ARAVILTPRAHNPTGCSLSARRAAA 236 (431)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHcCCeEEee-ccCCCC--CCHHHHHHHHhcC--CCEEEECCCCCCCCCccCCHHHHHH
Confidence 9999999999999999999999999999999 887665 6899999988754 4888887 99999999999999999
Q ss_pred HHHHHHHc-CCEEEEcccccccccCCCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc
Q 015768 189 ISDLCKAA-GSWLVVDNTYEYFMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266 (400)
Q Consensus 189 i~~l~~~~-~~~li~D~a~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~ 266 (400)
|.++|++| +++||+||+|..+.+.+... .....+++++++||||.+| +|+|+||++.+ +++++++........+
T Consensus 237 l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~---~~~~~~~~~~~~~~~~ 312 (431)
T PRK15481 237 LRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASD---SATSARLRLRLNSGTQ 312 (431)
T ss_pred HHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCC---HHHHHHHHHHHhcccc
Confidence 99999999 99999999999887643211 1123468999999999999 99999999998 7888888766554456
Q ss_pred CccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 267 CASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 267 ~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
+++.+.|.++..+|+++. +++.+.++.++++++.+.+.|++.+. .+..|.+++|+|++++. +..+++..+. ++
T Consensus 313 ~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~-~~~~p~gg~f~~~~l~~---~~~~~~~~l~-~~ 387 (431)
T PRK15481 313 WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGI-AIPSPGDGLNLWLPLDT---DSQATALTLA-KS 387 (431)
T ss_pred CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccccCCCeEEEEEECCC---CHHHHHHHHH-HC
Confidence 689999999999998753 56788889999999999999998754 66678889999999974 4577888775 79
Q ss_pred CeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 345 gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
||.+.||..|+. .+++||+++..+++++++++++|++++.
T Consensus 388 gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 388 GWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred CcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 999999998853 3689999998789999999999998864
No 54
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-45 Score=351.16 Aligned_cols=349 Identities=28% Similarity=0.405 Sum_probs=303.4
Q ss_pred CCeEEcCCCCCCCC-CcHHHHH-HHHHhhcC--CC-CCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHH
Q 015768 30 KNAVSLAQGVVYWQ-PPKMAME-KVKELVWD--PS-ISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAF 102 (400)
Q Consensus 30 ~~~i~~~~~~~~~~-~~~~v~~-a~~~~~~~--~~-~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~ 102 (400)
++.++|+.+.++.. .|.+.++ .+.+.+.+ .. ...|++..|..++|+.+++++....|+ ++++|++|+|+++|+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 78999999986653 4555554 44555433 22 467888899999999999999966664 578999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe-CCCCCCccCC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYI 181 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~-~p~nptG~~~ 181 (400)
+.+.+.+++|||+|++++|+|++...+++..|++++.+ |.|++| +++|.|++.++..+ +|+++++ +.+||||.++
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~v-p~d~~G--~~~e~le~~~~~~~-~k~~y~~P~~qNPtG~tm 244 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPV-PVDEDG--IDPEALEEALAQWK-PKAVYVTPTFQNPTGVTM 244 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEec-CCCCCC--CCHHHHHHHHhhcC-CcEEEECCCCCCCCCCcc
Confidence 99999999999999999999999999999999999999 999887 59999999998653 7999888 5699999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
|.++.++|+++|++||++||+||.|+.+.+++.+.. .+..+++++++||||.++ ||+|+||++.+ +++++++
T Consensus 245 s~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p---~~~~~~~ 320 (459)
T COG1167 245 SLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAP---PELIEKL 320 (459)
T ss_pred CHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCC---HHHHHHH
Confidence 999999999999999999999999999999865542 223589999999999996 99999999999 8999999
Q ss_pred HHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCC--CCcccCCCCceEEEeeCCCCCCCH
Q 015768 258 LKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLG--EGAVKGGEGAIYLWARLPEKHLDD 333 (400)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 333 (400)
...+......++.+.|.++...+..+ .+++.+++..++++++.+.+.|++.. ...+..|.+|+|+|++++... +.
T Consensus 321 ~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~-~~ 399 (459)
T COG1167 321 LRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI-DA 399 (459)
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC-CH
Confidence 99888889999999999999999965 47889999999999999999999964 467888999999999999875 77
Q ss_pred HHHHHHHHHhcCeEEeC-CCccCC----CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 334 FEVVRWLAHRHGVVVIP-GGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~-g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.++....+ ++|+.+.| |..|.. .+++|++++..+.+++++++++|.+++++...
T Consensus 400 ~~l~~~a~-~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~ 458 (459)
T COG1167 400 RELLAAAL-EKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA 458 (459)
T ss_pred HHHHHHHH-HCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 78888765 78999998 888853 34899999998899999999999999988653
No 55
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.1e-45 Score=349.30 Aligned_cols=377 Identities=21% Similarity=0.331 Sum_probs=296.3
Q ss_pred HHHHhhhcC----chHHHHHHHHH-------hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcC-----------CCCCCC
Q 015768 7 LAKRALETE----MPIMVQIQELV-------RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD-----------PSISKY 64 (400)
Q Consensus 7 ~~~~~~~~~----~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y 64 (400)
+|+|..... .+++.....+. .+..++|+|+.++|-+ ....+.+.+.+.... .....|
T Consensus 13 ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN~l-~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y 91 (447)
T PLN02607 13 LSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAENQV-SFDLLEEYLKQHPEASSWGGKGAPGFRENALF 91 (447)
T ss_pred hhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhhhh-hHHHHHHHHHhCchhhccccccccccchhhcc
Confidence 677765322 45555443332 2335599999998665 345566666554320 013447
Q ss_pred CCCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEE
Q 015768 65 GADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHIL 139 (400)
Q Consensus 65 ~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~ 139 (400)
++..|...+|+++|+++.+.++ +++++|++|+|+++++..++.++++|||.|+++.|+|+++...++ ..|++++.
T Consensus 92 ~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~ 171 (447)
T PLN02607 92 QDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVP 171 (447)
T ss_pred CCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEE
Confidence 7788999999999999998765 578999999999999999999999999999999999999988777 57999999
Q ss_pred eccCCC-CCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC
Q 015768 140 VGPCSS-KTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214 (400)
Q Consensus 140 ~~~~~~-~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~ 214 (400)
+ +.+. +++.++.+.+++.++. ...+|+++++||+||||.+++.+++++|+++|++||+++|+||+|..+.++..
T Consensus 172 v-~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~ 250 (447)
T PLN02607 172 I-HCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSAS 250 (447)
T ss_pred E-eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC
Confidence 8 7763 4577899999998863 23369999999999999999999999999999999999999999998777643
Q ss_pred Ccccc----------C-CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC
Q 015768 215 KHCCV----------E-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 283 (400)
Q Consensus 215 ~~~~~----------~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 283 (400)
++... . .++++++.|+||.||++|+|+||+++.+ +++.+.+..... ...++.+.|.++...|++.
T Consensus 251 ~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n--~~l~~~~~~~~~--~~~~s~~~q~~~~~~L~d~ 326 (447)
T PLN02607 251 EFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYN--DKVVTTARRMSS--FTLVSSQTQHLLASMLSDE 326 (447)
T ss_pred CcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCc
Confidence 32110 1 4678999999999999999999999864 677666665432 2246788999999999863
Q ss_pred c---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCccC
Q 015768 284 P---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACG 355 (400)
Q Consensus 284 ~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~ 355 (400)
. .++...++++.++++.+.+.|++.+. .+..+.+|+|+|++++... ....++..++++++||.+.||..|+
T Consensus 327 ~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi-~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~ 405 (447)
T PLN02607 327 EFTENYIRTNRERLRKRYEMIVQGLRRAGI-ECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCH 405 (447)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccC
Confidence 2 44566778888899999999998754 7777888999999997421 1134677778777899999999886
Q ss_pred C--CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhccC
Q 015768 356 C--RGHLRISFGGLVEDDCKAAADRLRRGLEELVKDG 390 (400)
Q Consensus 356 ~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 390 (400)
. ++|+|++++..+++++++++++|.+++++...++
T Consensus 406 ~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~~~~~~ 442 (447)
T PLN02607 406 CSEPGWFRVCFANMSEDTLEVALKRIHRFMDRRKTAS 442 (447)
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 4 7999999997689999999999999998765543
No 56
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-44 Score=340.43 Aligned_cols=351 Identities=21% Similarity=0.328 Sum_probs=293.1
Q ss_pred HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 25 ~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
....++++|+|+.+.+.+++++.+++++.+.+.......|++..|.+++|+++++++ |+++++|++|+|+++++..
T Consensus 23 ~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l----~~~~~~v~~~~g~t~al~~ 98 (380)
T PRK06225 23 YVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL----GLDDDEALITAGATESLYL 98 (380)
T ss_pred HHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc----CCCCCcEEEeCCHHHHHHH
Confidence 345568899999999999999999999999987655567888889999999999987 7888999999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~ 182 (400)
++.+++.+||+|++++|+|..+...++..|++++.+ |.+ ++++.+|++.+++.+.+++ +++++++|+||||.+++
T Consensus 99 ~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~--~~v~l~~p~NptG~~~~ 175 (380)
T PRK06225 99 VMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEV-PIYSEECNYKLTPELVKENMDENT--RLIYLIDPLNPLGSSYT 175 (380)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEee-ccccccCCccCCHHHHHhhcCCCc--eEEEEeCCCCCCCcCCC
Confidence 999999999999999999998888889999999988 764 3356789999999887665 89999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD 262 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~ 262 (400)
.+++++|+++|++||+++|+||+|..+..+.........++.+++.|+||.+|++|+|+||++++ +++++++.....
T Consensus 176 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~---~~l~~~~~~~~~ 252 (380)
T PRK06225 176 EEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVAT---PDLIEVVKSIVI 252 (380)
T ss_pred HHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecC---HHHHHHHHHHHh
Confidence 99999999999999999999999987765432222223567899999999999899999999998 788888776542
Q ss_pred cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768 263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHLDDFEVVRWLA 341 (400)
Q Consensus 263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (400)
..++.+.+.+.++..+++...++.++.++.++++++.+.+.|++++...+ ..+.+++++|+.++....+..++..+|.
T Consensus 253 -~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~ 331 (380)
T PRK06225 253 -NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLL 331 (380)
T ss_pred -cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHH
Confidence 35677888998888888765567777777777888888899988644222 2345588899998754346788998886
Q ss_pred HhcCeEEeCCCccC---CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 342 HRHGVVVIPGGACG---CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 342 ~~~gi~v~~g~~~~---~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++||.+.||..|. +++++|++++. +++++++++++|+++++.+++
T Consensus 332 -~~gi~v~~g~~~~~~~~~~~iR~s~~~-~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 332 -ERKIFVRQGTYTSKRFGDRYIRVSFSI-PREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred -HCCEEEcCCcccCcCCCCceEEEEeCC-CHHHHHHHHHHHHHHHHHhhc
Confidence 8899999997664 35699999996 899999999999999998764
No 57
>PLN02231 alanine transaminase
Probab=100.00 E-value=6.7e-45 Score=351.34 Aligned_cols=360 Identities=24% Similarity=0.354 Sum_probs=288.6
Q ss_pred HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcC--C-CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChH
Q 015768 25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD--P-SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGAN 99 (400)
Q Consensus 25 ~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t 99 (400)
.....+++|+|+.+.+.++ ..++++..+.+.+ + ..+.|++..|.+++|+++++++.+++| +++++|++|+|++
T Consensus 124 ~~~~~p~~i~~~~~~~~fp--~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~ 201 (534)
T PLN02231 124 ALCDHPSLLDKSETHGLFS--ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGAS 201 (534)
T ss_pred HhccCCccCCCCCccccCC--HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHH
Confidence 3455578999987666665 4777777666654 2 357799999999999999999998876 4689999999999
Q ss_pred HHHHHHHHHhc-CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccC----CCCeEEEEeCC
Q 015768 100 QAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK----PTPKLVSVVNP 173 (400)
Q Consensus 100 ~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~----~~~~~v~l~~p 173 (400)
+++..++.+++ .+||.|+++.|+|+.+...++..|.+++.+ ++++ ++|.+|+++|++.++.. ..+|++++++|
T Consensus 202 ~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~-~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP 280 (534)
T PLN02231 202 PAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPY-YLDEATGWGLEISELKKQLEDARSKGITVRALVVINP 280 (534)
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEE-ecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCC
Confidence 99999999998 489999999999999999999999999999 8875 46889999999988641 13599999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC-CCCcccc-----------CCCcEEEEecccccc-CCCcce
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD-GRKHCCV-----------EGDHVVNLFSFSKAY-GMMGWR 240 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~-~~~~~~~-----------~~~~~i~~~s~sK~~-g~~g~~ 240 (400)
+||||.+++.+++++|+++|++||++||+||+|..+.+. +.++... ....+++++|+||.+ |++|+|
T Consensus 281 ~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlR 360 (534)
T PLN02231 281 GNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKR 360 (534)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccc
Confidence 999999999999999999999999999999999999884 3222111 112578999999976 789999
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC---c----H---HHHHHHHHHHHHHHHHHHHhccCCC
Q 015768 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG---P----E---WVTERVKDLVRNREIIREALSPLGE 310 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---~----~---~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (400)
+||++..+..+++++.+.+... ...+++.+.|.++..+++.. + + +..+.++.++++++.+.+.|+++++
T Consensus 361 iGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~g 439 (534)
T PLN02231 361 GGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEG 439 (534)
T ss_pred eEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999763111788888877654 34566778888888888531 1 1 2234567889999999999999877
Q ss_pred CcccCCCCceEEEeeC--CCCC---------CCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHH
Q 015768 311 GAVKGGEGAIYLWARL--PEKH---------LDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAA 376 (400)
Q Consensus 311 ~~~~~~~~~~~~~~~~--~~~~---------~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~ 376 (400)
+.+..|++++|+|+++ +... .+...++.+|+++.||.+.||..|+. ..++|+++.. +++++++++
T Consensus 440 i~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~-~~e~l~eal 518 (534)
T PLN02231 440 VTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILP-QEDKIPAIV 518 (534)
T ss_pred ceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCC-CHHHHHHHH
Confidence 7888999999999554 3211 12334567788889999999999974 3479999975 899999999
Q ss_pred HHHHHHHHHHhcc
Q 015768 377 DRLRRGLEELVKD 389 (400)
Q Consensus 377 ~~l~~~l~~~~~~ 389 (400)
++|.++++++.++
T Consensus 519 ~RL~~~~~~~~~~ 531 (534)
T PLN02231 519 SRLTEFHKSFMDE 531 (534)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988653
No 58
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.2e-45 Score=350.94 Aligned_cols=376 Identities=20% Similarity=0.293 Sum_probs=290.6
Q ss_pred HHHHhhh---cCchHHHHHHHHHhc--------CCCeEEcCCCCCCC--CC-cHHHHHHHHHhhcC-------CCCCCCC
Q 015768 7 LAKRALE---TEMPIMVQIQELVRG--------AKNAVSLAQGVVYW--QP-PKMAMEKVKELVWD-------PSISKYG 65 (400)
Q Consensus 7 ~~~~~~~---~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~--~~-~~~v~~a~~~~~~~-------~~~~~y~ 65 (400)
+|++... ++.+....-++.+.. ..++|.|+.++|.+ .. ++.+.+.....+.. .....|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 91 (496)
T PLN02376 12 LSKIATNDQHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQ 91 (496)
T ss_pred hhhhhcccccCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccC
Confidence 5555552 344444445555433 23689999999776 32 44444433321111 2245688
Q ss_pred CCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEe
Q 015768 66 ADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILV 140 (400)
Q Consensus 66 ~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~ 140 (400)
+..|.+++|+++++++.+.+| +++++|++|+|+++++..++.++++|||.|+++.|+|+++...++ ..|++++.+
T Consensus 92 ~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v 171 (496)
T PLN02376 92 DYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPV 171 (496)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEE
Confidence 889999999999999998876 679999999999999999999999999999999999999998887 589999999
Q ss_pred ccCCC-CCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC
Q 015768 141 GPCSS-KTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK 215 (400)
Q Consensus 141 ~~~~~-~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~ 215 (400)
|.+. +++.++++.++..+. ....+|+|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+.+.+
T Consensus 172 -~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~ 250 (496)
T PLN02376 172 -PCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGD 250 (496)
T ss_pred -eCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCC
Confidence 8863 456789999876643 1234699999999999999999999999999999999999999999998876543
Q ss_pred ccc---c----C-----CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC
Q 015768 216 HCC---V----E-----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG 283 (400)
Q Consensus 216 ~~~---~----~-----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 283 (400)
+.. . . .+.+++++||||.+|++|+|+||+++++ +.+.+.+..... ...++.+.|.++..+|+.+
T Consensus 251 ~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~--~~l~~~~~~~~~--~~~vs~~~Q~a~~~~L~d~ 326 (496)
T PLN02376 251 FVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFN--DSVVSCARKMSS--FGLVSSQTQLMLASMLSDD 326 (496)
T ss_pred cccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCh
Confidence 221 1 0 1345678999999999999999999864 566665554432 2347889999999999863
Q ss_pred c---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCC------CHHHHHHHHHHhcCeEEeCCCcc
Q 015768 284 P---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHL------DDFEVVRWLAHRHGVVVIPGGAC 354 (400)
Q Consensus 284 ~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~ 354 (400)
. +++.+.++.+.++++.+.+.|++.+. .+..+.+|+|+|++++.... +..++...++++.||.+.||..|
T Consensus 327 ~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi-~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F 405 (496)
T PLN02376 327 QFVDNFLMESSRRLGIRHKVFTTGIKKADI-ACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSF 405 (496)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-cccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCcccc
Confidence 2 33445577788888999999988754 67778889999999975321 23567888887789999999998
Q ss_pred C--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 355 G--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 355 ~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+ .++|+||+++..+++.+++++++|++++.+...
T Consensus 406 ~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~~ 441 (496)
T PLN02376 406 RCTEPGWFRICFANMDDDTLHVALGRIQDFVSKNKN 441 (496)
T ss_pred CCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhhh
Confidence 6 468999999976789999999999999976543
No 59
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=6e-45 Score=341.10 Aligned_cols=349 Identities=23% Similarity=0.368 Sum_probs=289.8
Q ss_pred hhHHHHhhhcCchHHHHHHHH-HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768 5 AKLAKRALETEMPIMVQIQEL-VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
|++|+|+++.....+..+... .+.++++++|+.+++..+.++.+.+++.+... ...|++..|.+++|+++++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~l~~ 77 (364)
T PRK07865 1 MPVSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAAD---APGYPTTAGTPELREAIVGWLAR 77 (364)
T ss_pred CCccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHh---hCCCCCccCCHHHHHHHHHHHHH
Confidence 678899998887777777544 46667899999998877777888888876543 24698889999999999999998
Q ss_pred hcC---CCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh
Q 015768 84 ENK---LYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159 (400)
Q Consensus 84 ~~~---~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l 159 (400)
.+| +++++|++|+|+++++..++.++ +++||+|+++.|+|+.+...++..|++++.+ +. +++++.
T Consensus 78 ~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~--------~~~l~~-- 146 (364)
T PRK07865 78 RRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRA-DS--------LTELGP-- 146 (364)
T ss_pred HcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEec-CC--------hhhCCc--
Confidence 875 55899999999999999988888 6999999999999999999999999998877 41 222221
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-------CCCcEEEEecccc
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-------EGDHVVNLFSFSK 232 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-------~~~~~i~~~s~sK 232 (400)
.+ ++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++...... ..+++++++||||
T Consensus 147 -~~--~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 223 (364)
T PRK07865 147 -QR--PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSK 223 (364)
T ss_pred -cc--ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechh
Confidence 23 5999999999999999999999999999999999999999999887755322211 2357899999999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768 233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA 312 (400)
Q Consensus 233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (400)
.+|++|+|+||++.+ +++++++........++++.+.+.++..+++. .++.++.++.++++++.+.+.|++.+ +.
T Consensus 224 ~~~~~GlRiG~i~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 298 (364)
T PRK07865 224 QSNLAGYRAGFVAGD---PALVAELLEVRKHAGMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLRPALEAAG-FR 298 (364)
T ss_pred ccCCCceeeEEEecC---HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence 999999999999988 78888888776656677889999999999975 56778888889999999999999875 46
Q ss_pred ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHH
Q 015768 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
+..+.+++|+|+.++. +..++...+ .++||.+.||..|+ .++++||+++. +++++++++++|+
T Consensus 299 ~~~~~~~~~~~~~~~~---~~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~~~~~~l~ 363 (364)
T PRK07865 299 VDHSEAGLYLWATRGE---DCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTA-TDERIAAAVERLA 363 (364)
T ss_pred ccCCCccEEEEEeCCC---CHHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecC-CHHHHHHHHHHhh
Confidence 7778888999998853 456677666 58999999999876 46799999986 7899999999885
No 60
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-45 Score=347.86 Aligned_cols=350 Identities=22% Similarity=0.327 Sum_probs=276.6
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh-c-C-C-C--CCcEEEeCChHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE-N-K-L-Y--KSSVMVTAGANQAFV 103 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~-~-~-~-~--~~~i~~~~g~t~a~~ 103 (400)
.+.|+|+.|.+++++|+.+.+.+... .. ..|+++.|..++|+++++++.+. . + . + .++|++|+|+++|+.
T Consensus 100 ~~~i~l~~g~p~~~~~~~v~e~~~~~-~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~ 175 (527)
T PRK09275 100 RDAVSYVRDQLGFDADEFVYELVDGI-IG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMC 175 (527)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHH-hc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHH
Confidence 34799999999999888888855444 32 24999999999999999966543 2 2 1 2 248999999999999
Q ss_pred HHHHH-----hcCCCCEEEEeCCCccchhHHHHhcC--cEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768 104 NIVLT-----LCDAGDSVVMFAPYYFNSYMSFQMTG--VTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (400)
Q Consensus 104 ~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~g--~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n 175 (400)
.++.+ +++|||+|++++|+|+.+...++..| +.++.+ +.+ +++|.++.+.+++++++++ |+|++++|+|
T Consensus 176 ~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v-~~~~~~~f~~d~~~l~~~~~~~t--kai~l~nP~N 252 (527)
T PRK09275 176 YIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHI-NADEENEWQYPDSELEKLRDPSI--KALFLVNPSN 252 (527)
T ss_pred HHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEe-ecCcccCCCCCHHHHHhhcCCCC--CEEEEeCCcC
Confidence 99986 68999999999999999999887765 566666 554 4568999999999887665 9999999999
Q ss_pred CCccCCCHHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCC--cH
Q 015768 176 PSGTYIPERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE--VE 251 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~--~~ 251 (400)
|||.+++.+++++|+++|++ ++++||+||+|..+.+..........+++++++||||.||++|+|+||++++.+ ..
T Consensus 253 PTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~ 332 (527)
T PRK09275 253 PPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFD 332 (527)
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHH
Confidence 99999999999999999964 599999999999887532222222346899999999999999999999998852 00
Q ss_pred HHHHHH--------------------------------HHhhccCCcCccHHHHHHH-----HHHhcCCcHHHHHHHHHH
Q 015768 252 GFATQL--------------------------------LKVQDNIPICASIISQHLA-----LYSLQTGPEWVTERVKDL 294 (400)
Q Consensus 252 ~~~~~l--------------------------------~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ 294 (400)
++++.+ .......+.+.+.+.|.++ .++++..+++..++++.+
T Consensus 333 ~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~ 412 (527)
T PRK09275 333 KLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDII 412 (527)
T ss_pred HHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 122222 2333445677888888863 344665557788889999
Q ss_pred HHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---------------CCCHHHHHHHHHHhcCeEEeCCCccCC-CC
Q 015768 295 VRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGACGC-RG 358 (400)
Q Consensus 295 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~ 358 (400)
+++++.+.+.|. .+ .....|.+++|+|++++.. ..+..+++.+|+++.||.+.||..|+. ++
T Consensus 413 ~~Rr~~l~~~Lg-~~-~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~ 490 (527)
T PRK09275 413 RRRYKALYEGLG-LP-EPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEW 490 (527)
T ss_pred HHHHHHHHHHcC-CC-CcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCC
Confidence 999999988883 22 2335688899999998642 125778999999999999999999974 67
Q ss_pred eEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 359 HLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 359 ~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++|+|++..+++++.+++++|.+++.++.+
T Consensus 491 ~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 491 SVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred eEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 899999977899999999999999988764
No 61
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-44 Score=338.13 Aligned_cols=337 Identities=22% Similarity=0.305 Sum_probs=275.1
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~ 104 (400)
+.+++|+.|++++++|+.+++++.+.+..+. ...| +..|..++|+++++++.+.++ +++++|++|+|+++++..
T Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~ 106 (374)
T PRK02610 28 IQLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRS 106 (374)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHH
Confidence 3589999999999999999999998877642 3568 457899999999999987753 678999999999999998
Q ss_pred HHHHhcCCCC-EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015768 105 IVLTLCDAGD-SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 105 ~~~~l~~~gd-~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~ 181 (400)
++.+++.+|| +|+++.|+|..+...++..|++++.+ +.+++++.+|++++++.++. ...++++++++||||||.++
T Consensus 107 ~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~ 185 (374)
T PRK02610 107 LLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRV-GRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL 185 (374)
T ss_pred HHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEe-cCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC
Confidence 8888887886 89999999999999999999999999 88776678999999998863 12369999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 261 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~ 261 (400)
+.++++++.++| +++++|+||+|..+.+..........++.++++||||.+|++|+|+||++++ +++++.+....
T Consensus 186 s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~---~~l~~~l~~~~ 260 (374)
T PRK02610 186 TAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH---PELIAVLEKVR 260 (374)
T ss_pred CHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecC---HHHHHHHHHhc
Confidence 999999999877 4999999999998864221111122457888999999999999999999998 88888888765
Q ss_pred ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768 262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 341 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (400)
. .++.+.+.|.++..+++....+.+.+. .+.+.++.+.+.|+.++.+.+. |.+++|+|++++... +..+++..+
T Consensus 261 ~--~~~~~~~~q~a~~~~l~~~~~~~~~~~-~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~~-~~~~~~~~l- 334 (374)
T PRK02610 261 L--PYNLPSFSQLAAQLALEHRQELLAAIP-EILQERDRLYQALQELPQLRVW-PSAANFLYLRLSQDA-ALAALHQAL- 334 (374)
T ss_pred C--CCCCCHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHhCCCcEeC-CCcceEEEEeCCCCC-CHHHHHHHH-
Confidence 3 566788999999999986444444444 4455577788888887554544 677999999998643 677888876
Q ss_pred HhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 342 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++||.+.++ ++++||+++. .+++++++++|++++.++
T Consensus 335 ~~~gi~v~~~-----~~~lRls~~~--~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 335 KAQGTLVRHT-----GGGLRITIGT--PEENQRTLERLQAALTQL 372 (374)
T ss_pred HHCCEEEEeC-----CCeEEEeCCC--HHHHHHHHHHHHHHHhhc
Confidence 4899999763 5789999985 567899999999998765
No 62
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.3e-44 Score=337.44 Aligned_cols=328 Identities=20% Similarity=0.295 Sum_probs=278.9
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
++++.|+|+.|++++++|+.+++++.+.+.. ...| +..|..++|+++++++ ++++++|++|+|+++++..++.
T Consensus 27 ~~~~~i~l~~nen~~~~~~~v~~a~~~~~~~--~~~Y-p~~g~~~Lr~aia~~~----~~~~~~I~vt~Gs~e~i~~~~~ 99 (366)
T PRK01533 27 GDHSFVKLASNENPFGCSPRVLDELQKSWLD--HALY-PDGGATTLRQTIANKL----HVKMEQVLCGSGLDEVIQIISR 99 (366)
T ss_pred CCCceEEeCCCCCCCCCCHHHHHHHHHHHHh--cCcC-CCCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence 5678999999999999999999999887654 2346 5678899999999998 7899999999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
+++++||+|++++|+|+.+...++..|++++.+ |.+++ .+|++.+++.+++++ +++++++||||||.+++.++++
T Consensus 100 ~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v-~~~~~--~~d~~~l~~~~~~~~--~~v~i~~P~NPTG~~~~~~~l~ 174 (366)
T PRK01533 100 AVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEV-ALNNG--VYDLDEISSVVDNDT--KIVWICNPNNPTGTYVNDRKLT 174 (366)
T ss_pred HhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEe-ecCCC--CcCHHHHHHHhCcCC--cEEEEeCCCCCCCCCcCHHHHH
Confidence 999999999999999999999999999999999 88644 479999999887655 9999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCC--c-c-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRK--H-C-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~--~-~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
+|+++|++++ ++|+||+|..+.+.+.. . . ....+++++++||||.+|++|+|+||++++ +++++.+.+...
T Consensus 175 ~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~---~~~~~~l~~~~~- 249 (366)
T PRK01533 175 QFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH---EELIEKLNVVRL- 249 (366)
T ss_pred HHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC---HHHHHHHHHhcC-
Confidence 9999998766 67789999987764321 1 1 113468999999999999999999999998 889999887653
Q ss_pred CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768 264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (400)
.++++.+++.++..+|+. .+|.++..+...++++++.+.++.++. .+..+. ++|+|++++ +..++..+|+ +
T Consensus 250 -~~~~~~~~q~aa~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~~g~-~~~~~~-~nf~~~~~~----~~~~~~~~l~-~ 320 (366)
T PRK01533 250 -PFNVSSLAQKAATIAFGD-DEFIEEIVRVNTEGLRQYESFCKENEI-PFYQSQ-TNFIFLPVE----NGGEIYEACA-H 320 (366)
T ss_pred -CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCC-ccCCCc-CcEEEEeCC----CHHHHHHHHH-H
Confidence 578999999999999975 577788888888888888888888764 666665 889999986 3567888776 8
Q ss_pred cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+||.|++ | ++++||+++. .++.+.+++.|++.+....+
T Consensus 321 ~GI~Vr~---~--~~~iRis~~~--~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 321 AGFIIRP---F--PNGVRITVGT--REQNEGVISVLQQHFENKKR 358 (366)
T ss_pred CCcEEcc---C--CCceEEeCCC--HHHHHHHHHHHHHHHHhccc
Confidence 9999997 3 6889999984 78889999999888776543
No 63
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.6e-43 Score=335.36 Aligned_cols=339 Identities=25% Similarity=0.400 Sum_probs=272.9
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
++++++|+.+++++++++.+.+++.+.+.+. ....|++..|.+.+|+++++++.+. ++++++|++|+|+++++..
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~d~I~it~Ga~~al~~ 110 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDPEEIFISDGAKCDVFR 110 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCHHHEEECCCcHHHHHH
Confidence 5789999999999998999999998887652 2356888899999999999986433 4789999999999999998
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCc-----------EEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV-----------THILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~ 172 (400)
+. .+..+||+|++++|+|..+...++..|+ +++.+ |.++ +++.++++. ..+ +++|++++
T Consensus 111 l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~-----~~~--~~~i~l~n 181 (402)
T TIGR03542 111 LQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYL-PCTKENNFIPDLPE-----EPK--IDIIYLCS 181 (402)
T ss_pred HH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEe-ecchhhCCCCCccc-----cCC--ceEEEEeC
Confidence 64 5567999999999999999999999999 88888 7764 355554321 123 59999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC--CCcEEEEeccccccCCCcceeEEEEcc
Q 015768 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE--GDHVVNLFSFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~--~~~~i~~~s~sK~~g~~g~~~G~i~~~ 247 (400)
||||||.+++.+++++|+++|++||+++|+||+|..+.+++.... ... .+++++++||||.+|++|+|+||++++
T Consensus 182 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~ 261 (402)
T TIGR03542 182 PNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVP 261 (402)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEec
Confidence 999999999999999999999999999999999999887543211 111 256889999999999999999999998
Q ss_pred CCcHHHH--------HHHHHhhccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768 248 SEVEGFA--------TQLLKVQDNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318 (400)
Q Consensus 248 ~~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 318 (400)
++++ +.+.........+++.+.|.++..++... .++..+.++.++++++.+.+.|++.+ +.+..+.+
T Consensus 262 ---~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~ 337 (402)
T TIGR03542 262 ---KELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAG-FKVYGGEH 337 (402)
T ss_pred ---HHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcC-ceecCCCc
Confidence 5655 22222222223357889999888888753 24566677788889999999998875 46677777
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
++|+|++++.. .+..+++.++++++||.+.||..|+. ++++||+++. +++++++++++|++++
T Consensus 338 ~~f~~v~l~~~-~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~~ 402 (402)
T TIGR03542 338 APYLWVKTPEG-ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG-KRENIVEACERIKEAL 402 (402)
T ss_pred eeEEEEECCCC-CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHhhC
Confidence 99999999864 36778898888778999999998863 5899999876 8999999999998763
No 64
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-44 Score=326.40 Aligned_cols=330 Identities=25% Similarity=0.389 Sum_probs=284.6
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHHHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
+++++|+.+++++++|+.+.+++.+.+.. ...|+ .....++++++++++ | .++++|++++|+++.+..++++
T Consensus 22 ~~~i~LssNenP~gp~~~~~~~~~~~~~~--~~rYP-d~~~~~l~~a~a~~~----~~~~~~~V~~gnGsde~i~~l~~~ 94 (356)
T COG0079 22 PGIIKLSSNENPYGPPPKVIEAIRAALDK--LNRYP-DPDYRELRAALAEYY----GVVDPENVLVGNGSDELIELLVRA 94 (356)
T ss_pred ccceeecCCCCCCCCCHHHHHHHHHHHHh--hccCC-CCcHHHHHHHHHHHh----CCCCcceEEEcCChHHHHHHHHHH
Confidence 46899999999999999999999888874 66784 447888999999988 5 7789999999999999999999
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
++.+||+|++..|+|..+...++..|++++.+ |.++ +..|++.+.+.+.+++ ++|++||||||||..++.+++++
T Consensus 95 ~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v-~~~~--~~~d~~~~~~~~~~~~--~lv~i~nPNNPTG~~~~~~~l~~ 169 (356)
T COG0079 95 FVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKV-PLKE--FRLDLDAILAAIRDKT--KLVFLCNPNNPTGTLLPREELRA 169 (356)
T ss_pred hhcCCCEEEEcCCChHHHHHHHHhcCCeEEEe-cccc--cccCHHHHHHhhhcCC--CEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999 8877 7889999999888744 99999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 268 (400)
+++.+.+ +.++|+||+|.+|............+++++++||||+||++|+|+||++.+ +++++.+++.+. +|+.
T Consensus 170 l~~~~~~-~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~---~~~i~~l~~vr~--p~~v 243 (356)
T COG0079 170 LLEALPE-GGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN---PELIAALNKVRP--PFNV 243 (356)
T ss_pred HHHhCCC-CcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCC---HHHHHHHHHhcC--CCCC
Confidence 9999888 999999999999886221111124677999999999999999999999998 899999999986 8889
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 347 (400)
|.+++.++.++++. .++..+..+.+...++++.+.|+.++ .. +.+.. ++|++++++. .. ...+.+.|+ ++||.
T Consensus 244 ~~~a~~aa~aal~~-~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~-aNFvlv~~~~-~~-~~~l~~~L~-~~gii 317 (356)
T COG0079 244 SSPALAAAIAALRD-ADYLEESVERIREERERLYAALKALG-LFGVFPSQ-ANFVLVRVPD-AE-AAALAEALL-KKGIL 317 (356)
T ss_pred CHHHHHHHHHHccc-HHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCC-CcEEEEECCC-cc-HHHHHHHHH-HCCEE
Confidence 99999999999997 48889999999999999999999998 45 66555 9999999986 22 557788776 78999
Q ss_pred EeCCCcc-CCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 348 VIPGGAC-GCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 348 v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
++..... ..++++||+++. +++-+.++++|.+++..
T Consensus 318 vR~~~~~~~~~~~lRitvgt--~een~~ll~AL~~~~~~ 354 (356)
T COG0079 318 VRDCSSVGLLPGYLRITVGT--PEENDRLLAALREVLKG 354 (356)
T ss_pred EEeCCCCCCCCCeEEEEeCC--HHHHHHHHHHHHHHHhc
Confidence 9988652 356799999995 66667777777776653
No 65
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.1e-44 Score=333.41 Aligned_cols=327 Identities=25% Similarity=0.346 Sum_probs=275.1
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
.+.++++|+.|++++++|+.+.+++.+.+.. ...|+ ..+.+.+|+++++++ ++++++|++|+|+++++..+++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~----~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 28 DPDDLVKLSSNENPHGPSPAAVEAIREAAER--VHSYP-KASHADLTAALADRW----DVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred CccceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence 4578999999999999999999999887654 56685 567899999999988 7889999999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
+++++||.|++++|+|..+....+..|..++.+ |.+. +++.++.+.+.+... + +++|++++||||||.++|.+++
T Consensus 101 ~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~-~l~~~~~~~~~~~~~~~~~~-~--~k~i~l~~p~NPTG~~~s~~~~ 176 (357)
T PRK14809 101 AMLDPGDTVLVPDPGFAYYGMSARYHHGEVREY-PVSKADDFEQTADTVLDAYD-G--ERIVYLTSPHNPTGSEIPLDEV 176 (357)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEE-ecccCcCCCcCHHHHHHhhc-C--CcEEEEeCCCCCCCcCCCHHHH
Confidence 999999999999999988888888889998888 7764 467778877766542 3 4899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~ 265 (400)
++|+++|++ ++++|+||+|..+.+.+..... ...+++++++||||.+|++|+|+||++++ +++++++.+... +
T Consensus 177 ~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~---~~~~~~~~~~~~--~ 250 (357)
T PRK14809 177 EALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP---EEWADAYARVNT--P 250 (357)
T ss_pred HHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecC---HHHHHHHHHhCC--C
Confidence 999999874 7899999999988764432211 23468899999999999999999999999 788888877643 6
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 345 (400)
++.+.+.+.++..+|+. .+++++.++.++++++.+.+.|+... . +.+++|+|++++ +..++...+ .++|
T Consensus 251 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~----~-~~~g~f~~~~~~----~~~~~~~~l-~~~g 319 (357)
T PRK14809 251 FAASELACRAGLAALDD-DEHVERTVETARWAREYIREELDAPT----W-ESAGNFVLAEVG----DASAVAEAA-QERG 319 (357)
T ss_pred CCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHhcCcc----C-CCCCCEEEEECC----CHHHHHHHH-HHCC
Confidence 67888999999998875 67788888888889999999887642 2 456899999985 467888876 5889
Q ss_pred eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
|.+.||..|+.++++||+++ +.+++++++++|+++++
T Consensus 320 v~v~~g~~f~~~~~iRls~~--~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 320 VIVRDCTSFGLPECIRITCG--TREETERAVEVLNEVLA 356 (357)
T ss_pred EEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHhc
Confidence 99999999987899999987 47899999999998764
No 66
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-42 Score=327.72 Aligned_cols=342 Identities=27% Similarity=0.457 Sum_probs=284.7
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~ 104 (400)
..+.++|+.|++++++++.+.+++.+.+... ....|++..|...+|+.+++++.+.++ +++++|++|+|+++++..
T Consensus 32 ~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~ 111 (394)
T PRK06836 32 ADNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNV 111 (394)
T ss_pred CCCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHH
Confidence 4678999999988888889999888777542 256788889999999999999988764 578999999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
++.+++++||.|++++|+|..+...++..|++++.+ |.+++++.+|++.+++.+++++ +++++++|+||||.++|.+
T Consensus 112 ~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~~~~~~--~~v~~~~p~NPtG~~~~~~ 188 (394)
T PRK06836 112 ALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVV-PTDTDTFQPDLDALEAAITPKT--KAVIINSPNNPTGVVYSEE 188 (394)
T ss_pred HHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEE-ecCCccCcCCHHHHHhhcCcCc--eEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999999999999999999 8887766789999999997655 9999999999999999999
Q ss_pred HHHHHHHHHHH------cCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH-
Q 015768 185 LLKRISDLCKA------AGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT- 255 (400)
Q Consensus 185 ~l~~i~~l~~~------~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~- 255 (400)
++++|+++|++ ||+++|+||+|.++.+++.... ....+++++++|+||.+|++|+|+||++.+ +++.+
T Consensus 189 ~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~---~~~~~~ 265 (394)
T PRK06836 189 TLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVN---PEMEDA 265 (394)
T ss_pred HHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecC---HHHhhh
Confidence 99999999999 8999999999999887653221 123568999999999999999999999998 34322
Q ss_pred -----HHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768 256 -----QLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 329 (400)
Q Consensus 256 -----~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 329 (400)
.+...... ...+.+.+.|.++...++.. ...+.++++++.+.+.|++++ ..+..+.+++|+|++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-----~~~~~~~~~r~~l~~~L~~~g-~~~~~~~gg~~~~~~~~~- 338 (394)
T PRK06836 266 DDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-----VDVSIYKRNRDLLYDGLTELG-FECVKPQGAFYLFPKSPE- 338 (394)
T ss_pred HHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHhCC-CEeecCCceEEEEEeCCC-
Confidence 22222221 12457788899988888752 124567778888999998886 477778889999999876
Q ss_pred CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 330 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+..+++..+ .++||.+.||..|+.++++||+++. +++++++++++|+++++++
T Consensus 339 -~~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~-~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 339 -EDDVAFCEKA-KKHNLLLVPGSGFGCPGYFRLSYCV-DTETIERSLPAFEKLAKEY 392 (394)
T ss_pred -CCHHHHHHHH-HhCCEEEECchhcCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 2677888665 5889999999998878899999995 8999999999999999865
No 67
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1e-43 Score=337.73 Aligned_cols=348 Identities=21% Similarity=0.291 Sum_probs=268.6
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHH-HHHHhhcC---CCCC--cEEEeCChHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALV-KKLNQENK---LYKS--SVMVTAGANQAFV 103 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a-~~l~~~~~---~~~~--~i~~~~g~t~a~~ 103 (400)
++.|+|+.|+++++++ +.+.++.+.+... .|+++.+...++++++ +++.+..+ .+++ +|++|+|+++|+.
T Consensus 94 ~~~i~l~~g~p~~~~~-~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~ 169 (521)
T TIGR03801 94 RDIISYVIDQLGFDPD-AFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMC 169 (521)
T ss_pred HHHHhhcCCCCCCCCC-HHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHH
Confidence 3579999999999855 5556555554321 4876777777777777 56665543 2334 8999999999999
Q ss_pred HHHHH-----hcCCCCEEEEeCCCccchhHHHHhc--CcEEEEeccCCC-CC-----CCCCHHHHHHhhccCCCCeEEEE
Q 015768 104 NIVLT-----LCDAGDSVVMFAPYYFNSYMSFQMT--GVTHILVGPCSS-KT-----LHPDADWLEKTLETKPTPKLVSV 170 (400)
Q Consensus 104 ~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~--g~~~~~~~~~~~-~~-----~~~~~e~l~~~l~~~~~~~~v~l 170 (400)
.++.+ +++|||+|+++.|+|+.+...++.. |++++.+ +.++ ++ |.++.+.+++++++++ |++++
T Consensus 170 ~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i-~~~~~~~~g~~~~~~d~~~l~~~~~~~~--kai~l 246 (521)
T TIGR03801 170 YIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRI-KADEMTEDGTHTWQYPDKELEKLRDPSI--KALFV 246 (521)
T ss_pred HHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEe-ecccccccccccCCCCHHHHHHhcCCCC--cEEEE
Confidence 99887 6899999999999999999887665 6788877 6643 22 8899999998876655 99999
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768 171 VNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
++|+||||.+++.+++++|+++|++| +++||+||+|+.+.+..........+++++++|+||.+|++|+|+||++.+.
T Consensus 247 ~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~ 326 (521)
T TIGR03801 247 VNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHK 326 (521)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCc
Confidence 99999999999999999999999986 9999999999988753222222234689999999999999999999999884
Q ss_pred CcHH----HH--------HHH------------------------HHhhccCCcCccHHHHH-----HHHHHhcCCcHHH
Q 015768 249 EVEG----FA--------TQL------------------------LKVQDNIPICASIISQH-----LALYSLQTGPEWV 287 (400)
Q Consensus 249 ~~~~----~~--------~~l------------------------~~~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~ 287 (400)
+. ++ +.+ +......+.+.+.+.|. ++.++++....+.
T Consensus 327 --~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~ 404 (521)
T TIGR03801 327 --DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYK 404 (521)
T ss_pred --hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHH
Confidence 21 21 111 22222345566777776 3445555545778
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC---------------CCHHHHHHHHHHhcCeEEeCCC
Q 015768 288 TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH---------------LDDFEVVRWLAHRHGVVVIPGG 352 (400)
Q Consensus 288 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~~~gi~v~~g~ 352 (400)
+++++.++++++.+.+.| ... .....+.+++|+|++++... .+..+++.+|+++.||.+.||.
T Consensus 405 ~~~~~~~~~R~~~l~~~L-g~~-~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~ 482 (521)
T TIGR03801 405 AETKDICRRREKLLFRGL-GLP-LQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGG 482 (521)
T ss_pred HHHHHHHHHHHHHHHHhc-CCC-CcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCch
Confidence 888899999999999988 222 23456778999999997421 1567899999999999999999
Q ss_pred ccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 353 ACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 353 ~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.|+. .+++|||++..+++++.++.++|.+++.++.+
T Consensus 483 ~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 483 GFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYE 519 (521)
T ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9985 56899999867899999999999999988754
No 68
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.1e-43 Score=334.05 Aligned_cols=356 Identities=21% Similarity=0.218 Sum_probs=277.6
Q ss_pred hhhcCchHHHHHHHHHhc--CCCeEEcCCCC---CCCCCc--HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768 11 ALETEMPIMVQIQELVRG--AKNAVSLAQGV---VYWQPP--KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~---~~~~~~--~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
+.....+.+..+.+.++. .++.|+|+.|. ++..+| +.+.+++.+.+..+....|++..|.+++|+++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 84 (396)
T PRK09257 5 LEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFG 84 (396)
T ss_pred CCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcC
Confidence 334444455556555554 46799999996 334334 67888888877654456799999999999999999987
Q ss_pred hcC--CCCCcE--EEeCChHHHHHHHHHHh--cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCHHHHH
Q 015768 84 ENK--LYKSSV--MVTAGANQAFVNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLE 156 (400)
Q Consensus 84 ~~~--~~~~~i--~~~~g~t~a~~~~~~~l--~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~e~l~ 156 (400)
..+ +++++| ++|+|+++|+..++.++ ++|||+|++++|+|+++...++..|++++.+ |. +++++.+|++.++
T Consensus 85 ~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v-~~~~~~~~~~d~~~l~ 163 (396)
T PRK09257 85 ADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTY-PYYDAATKGLDFDAML 163 (396)
T ss_pred CCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEE-eccccccCccCHHHHH
Confidence 765 367877 99999999999998776 4899999999999999999999999999999 87 4455678999999
Q ss_pred HhhccCCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC-CCccc----c-CCCcEEEEec
Q 015768 157 KTLETKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG-RKHCC----V-EGDHVVNLFS 229 (400)
Q Consensus 157 ~~l~~~~~-~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~~----~-~~~~~i~~~s 229 (400)
+.++.... .+++++++||||||.+++.+++++|+++|++|++++|+||+|..+.++. ..... . ..+++++++|
T Consensus 164 ~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~S 243 (396)
T PRK09257 164 ADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASS 243 (396)
T ss_pred HHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEE
Confidence 98863221 2555567999999999999999999999999999999999999887642 11111 1 2457899999
Q ss_pred cccccCCCcceeEEEEc--cCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHH
Q 015768 230 FSKAYGMMGWRVGYIAY--PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRN 297 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~--~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~ 297 (400)
|||.++++|+|+||++. ++ ++ +..++.........+++.+.|.++..++..+ .++++++++.++++
T Consensus 244 fSK~~~~~GlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~r 321 (396)
T PRK09257 244 FSKNFGLYGERVGALSVVAED--AEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAM 321 (396)
T ss_pred cCCcCccccccceeEEEEeCC--HHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988999999973 32 33 3333433333334456888999999999864 24566788899999
Q ss_pred HHHHHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHH
Q 015768 298 REIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKA 374 (400)
Q Consensus 298 ~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 374 (400)
++.+.+.|++++ ...+..|++|+|+|++++ .+++.++++++||.+.|. + ||+++..+++++++
T Consensus 322 r~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~~~~i~~ 387 (396)
T PRK09257 322 RQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT------PEQVDRLREEFGVYAVGS------G--RINVAGLNESNIDY 387 (396)
T ss_pred HHHHHHHHHhcCCCCCcccccccceEEEecCCC------HHHHHHHHHcCCEEEcCC------C--eEEEeeCCHHHHHH
Confidence 999999999874 256777889999999885 245667878999999873 1 99998778999999
Q ss_pred HHHHHHHHH
Q 015768 375 AADRLRRGL 383 (400)
Q Consensus 375 ~~~~l~~~l 383 (400)
++++|++++
T Consensus 388 ~~~~i~~~~ 396 (396)
T PRK09257 388 VAEAIAAVL 396 (396)
T ss_pred HHHHHHhhC
Confidence 999998763
No 69
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=9.4e-43 Score=325.05 Aligned_cols=335 Identities=23% Similarity=0.360 Sum_probs=276.3
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC---CCCCcEEE
Q 015768 18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK---LYKSSVMV 94 (400)
Q Consensus 18 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~---~~~~~i~~ 94 (400)
+...+.+....++++++|+.+++..++++.+.+++.+... ...|++..|..++|+++++++++++| +++++|++
T Consensus 9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~i 85 (357)
T TIGR03539 9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLP 85 (357)
T ss_pred HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEE
Confidence 3444455556678899999999888778888888876543 45698889999999999999988764 56899999
Q ss_pred eCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 95 TAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 95 ~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
|+|+++++..++..+ .++||.|++++|+|+++...++..|++++.+ + +.+.+. ..+ +++|++++|
T Consensus 86 t~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~--------~~~~l~---~~~--~~~v~~~~p 151 (357)
T TIGR03539 86 VIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAA-D--------DPTELD---PVG--PDLIWLNSP 151 (357)
T ss_pred ccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEecc-C--------ChhhcC---ccC--ccEEEEeCC
Confidence 999999999999888 7999999999999999999899999988776 3 222222 123 499999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-------CCCcEEEEeccccccCCCcceeEEEEc
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-------EGDHVVNLFSFSKAYGMMGWRVGYIAY 246 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-------~~~~~i~~~s~sK~~g~~g~~~G~i~~ 246 (400)
+||||.+++.+++++|.++|++||+++|+||+|..+.+++...... ..+++++++|+||.+|++|+|+||++.
T Consensus 152 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~ 231 (357)
T TIGR03539 152 GNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG 231 (357)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEec
Confidence 9999999999999999999999999999999999887754332211 235789999999999889999999998
Q ss_pred cCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeC
Q 015768 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARL 326 (400)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 326 (400)
+ +++++.+...+....++++.+.+.++..+|+. ..+..+.+..++++++.+.+.|++.+ +.+..|.+++|+|+++
T Consensus 232 ~---~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~p~~~~~~~~~~ 306 (357)
T TIGR03539 232 D---PALVAELLTVRKHAGLMVPAPVQAAMVAALGD-DGHVAEQKARYAARRAQLKPALEKAG-FRIDHSEAGLYLWATR 306 (357)
T ss_pred C---HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCccEEEEEEC
Confidence 8 78888888777656677899999999999975 46677788888899999999998875 4677788899999998
Q ss_pred CCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHH
Q 015768 327 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 327 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
+. +..++...| .++||.+.||..|+ .++++||+++. +++++++++++|
T Consensus 307 ~~---~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~-~~~~i~~~~~~l 356 (357)
T TIGR03539 307 GE---DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTA-TDERIAAAVARL 356 (357)
T ss_pred CC---CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecC-CHHHHHHHHHhh
Confidence 63 456777766 58999999999875 35799999997 789999998876
No 70
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=7.2e-43 Score=351.18 Aligned_cols=346 Identities=17% Similarity=0.179 Sum_probs=281.1
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC---CcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---SSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~---~~i~~~~g~t~a~~~ 104 (400)
.++++|+|+.|++++++|+.+++++.+.+.+.. + ..+.+++++++++++++++|++. ++|++++|+++++..
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~l 769 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNK 769 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHH
Confidence 467999999999999999999999998875532 2 23456789999999999988864 389999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCC-CCCccCCC
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPG-NPSGTYIP 182 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~-nptG~~~~ 182 (400)
++.++++|||+|+++.|+|+.+...++..|++++.+ |.++ +|+.+|.+.+++.++..+ .++|++++|+ ||||.+++
T Consensus 770 ll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~V-pl~~e~gf~lD~d~Le~al~~~~-~~~I~L~nPnhNPTG~v~S 847 (1082)
T PLN02672 770 LVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRI-PTKSSDGFKLTAKTLASTLETVK-KPWVYISGPTINPTGLLYS 847 (1082)
T ss_pred HHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHhccCC-CCEEEEECcCCCCcCccCC
Confidence 999999999999999999999999999999999999 8874 579999999999987532 2688999997 99999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-----c----ccC----CCcEEEEeccccccCCCcceeEEEEccCC
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----C----CVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~----~~~----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~ 249 (400)
.+++++|+++|++||++||+||+|..+.+++... . ... ..++++++|+||.++++|+|+||+++++
T Consensus 848 ~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~- 926 (1082)
T PLN02672 848 NSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALND- 926 (1082)
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCC-
Confidence 9999999999999999999999999888765321 0 001 1368999999999999999999999874
Q ss_pred cHHHHHHHHHhhccCC-cCccHHHHHHHHHHhc-CCc---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEe
Q 015768 250 VEGFATQLLKVQDNIP-ICASIISQHLALYSLQ-TGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 324 (400)
Q Consensus 250 ~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~-~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 324 (400)
+++++.+........ ...+..++.++..++. ... ++..+.++.++++++++.+.|++++. .+..|++++++|+
T Consensus 927 -~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi-~v~~PeGGFfLwl 1004 (1082)
T PLN02672 927 -SVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGW-DVLEPQGGISMVA 1004 (1082)
T ss_pred -HHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-eEecCCcEEEEEE
Confidence 568888876532111 2223333344343332 122 34567777899999999999999864 7888999999999
Q ss_pred eCCCC----------------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 325 RLPEK----------------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 325 ~~~~~----------------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+++.. ..+..+++.+|+++.||.+.||..|+.++++||+++. +++++++++++|+++..
T Consensus 1005 ~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~-~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1005 KPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFAL-EDSEFDRALKAIARFKE 1079 (1082)
T ss_pred EccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecC-CHHHHHHHHHHHHHHHH
Confidence 76421 1357889999987789999999988888999999996 88999999999998654
No 71
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4e-43 Score=332.61 Aligned_cols=338 Identities=21% Similarity=0.208 Sum_probs=265.5
Q ss_pred CCeEEcCCCCC-CCCCcHHHHHHHHHhh----cCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEE--EeCChHH
Q 015768 30 KNAVSLAQGVV-YWQPPKMAMEKVKELV----WDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVM--VTAGANQ 100 (400)
Q Consensus 30 ~~~i~~~~~~~-~~~~~~~v~~a~~~~~----~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~--~~~g~t~ 100 (400)
++.++|+.|.+ ++.++..+.+++.+++ .......|++..|.+++|+++++++.+..+ +++++|+ .|.|+++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 68899999985 4554444444444443 323357899999999999999999976654 4678888 4889999
Q ss_pred HHHHHHH---HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccC-CCCeEEEEeCCCC
Q 015768 101 AFVNIVL---TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK-PTPKLVSVVNPGN 175 (400)
Q Consensus 101 a~~~~~~---~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~n 175 (400)
++..++. ++++|||+|++++|+|+.+...++..|++++.+ |.. ++++.+|.+.+++.+... ...+++++++|||
T Consensus 109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~N 187 (404)
T PTZ00376 109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEY-RYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHN 187 (404)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeec-cccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 9988875 567999999999999999999999999999999 884 345778999999988632 2136777789999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Cc---c--ccCCCcEEEEeccccccCCCcceeEEE---E
Q 015768 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KH---C--CVEGDHVVNLFSFSKAYGMMGWRVGYI---A 245 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~---~--~~~~~~~i~~~s~sK~~g~~g~~~G~i---~ 245 (400)
|||.+++.+++++|+++|++|++++|+||+|..+.+++. .. . ....+++++++||||.++++|+|+||+ +
T Consensus 188 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~ 267 (404)
T PTZ00376 188 PTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVC 267 (404)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEe
Confidence 999999999999999999999999999999999887541 11 1 112357899999999999999999998 4
Q ss_pred ccCCcHHHHHHH----HHhhccCCcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHHHHHHHHHHhccCCC---Cc
Q 015768 246 YPSEVEGFATQL----LKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDLVRNREIIREALSPLGE---GA 312 (400)
Q Consensus 246 ~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~~~---~~ 312 (400)
.+ +++.+++ .........+++.+.|.++..+|+++. +| .++.+++++++++.+.+.|++++. +.
T Consensus 268 ~~---~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 344 (404)
T PTZ00376 268 AN---KEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWE 344 (404)
T ss_pred CC---HHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 55 6655443 332222234457789999999998632 22 455567888999999999998742 34
Q ss_pred ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+..|.+++|+|++++ .+++.+|++++||.+.||. |++++..+.++++.++++|++++..
T Consensus 345 ~~~p~gg~f~~~~~~------~~~~~~L~~~~~v~v~p~~--------Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 345 HIINQIGMFSFTGLT------KEQVERLIEKYHIYLLDNG--------RISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred ccccCceEEEecCCC------HHHHHHHHHhCCEeecCCC--------eEEEeccCHHhHHHHHHHHHHHHhc
Confidence 556888999999885 4778889888899999972 9999866899999999999998753
No 72
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-43 Score=328.87 Aligned_cols=327 Identities=22% Similarity=0.291 Sum_probs=275.4
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
..+.++|+.+.+++++++.+.+++.+.+.. ..|.+..|.+++|+++++++ ++++++|++|+|+++++..++.+
T Consensus 28 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 28 LEKIVKLASNENPYGPSPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHL----GVDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHh----CCCHHHEEECCCHHHHHHHHHHH
Confidence 448899999999998899999999887754 23446678899999999998 67889999999999999999999
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
+.++||+|++++|+|+.+...++..|.+++.+ |.++ +.+|++.+++.+++++ +++++++|+||||.+++.+++.+
T Consensus 101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~-~~~~--~~~d~~~l~~~~~~~~--~~v~i~~p~NPtG~~~~~~~l~~ 175 (359)
T PRK03158 101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREV-PLKD--GGHDLEAMLKAIDEQT--KIVWICNPNNPTGTYVNHEELLS 175 (359)
T ss_pred HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEE-ecCC--CCcCHHHHHHhcCCCC--CEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999 8873 3579999998887654 89999999999999999888888
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~ 264 (400)
+++.|+ +|+++|+||+|..+.+++.... ....+++++++||||.+|++|+|+||++++ +++++.+.....
T Consensus 176 ~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~---~~~~~~~~~~~~-- 249 (359)
T PRK03158 176 FLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS---EELIEKLNIARP-- 249 (359)
T ss_pred HHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC---HHHHHHHHHhcC--
Confidence 888774 6999999999998876542111 113468899999999999999999999998 788888877654
Q ss_pred CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
+++++.+++.++..+|+. .++.++..+.++++++.+.+.|++.+ +.+.++ +++|+|++++. +..++++.|+ ++
T Consensus 250 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~g~~i~~~~~~---~~~~~~~~l~-~~ 322 (359)
T PRK03158 250 PFNTTRIAQYAAIAALED-QAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPS-QTNFIFVDTGR---DANELFEALL-KK 322 (359)
T ss_pred CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCC-cCcEEEEECCC---CHHHHHHHHH-HC
Confidence 467899999999999975 56777888888888889999998875 355544 47899999852 5678888886 68
Q ss_pred CeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 345 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
||.+.||..|+.++++||+++ +.++.+.++++|+++
T Consensus 323 gv~v~~g~~f~~~~~iRi~~~--~~~~~~~l~~al~~~ 358 (359)
T PRK03158 323 GYIVRSGAALGFPTGVRITIG--LKEQNDKIIELLKEL 358 (359)
T ss_pred CeEEeeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHh
Confidence 999999998887899999998 488888888888764
No 73
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1e-42 Score=323.99 Aligned_cols=328 Identities=17% Similarity=0.299 Sum_probs=273.0
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
++.++|+.+.++.++|+.+++++.+.+.. ...|+ ..+..++|+++++++ ++++++|++|+|+++++..++.++
T Consensus 19 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~~~~ 91 (354)
T PRK06358 19 NMILDFSANINPLGVPESLKQAITENLDK--LVEYP-DPDYLELRKRIASFE----QLDLENVILGNGATELIFNIVKVT 91 (354)
T ss_pred cceEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCC-CccHHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHHHHh
Confidence 45799999998888899999999887754 55685 456789999999998 788999999999999999999987
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.+ ++|+++.|+|+.+...++..|++++.+ |.++ +++.+| +++.+.+..+ ++++++++|+||||.+++.+++++
T Consensus 92 -~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d-~~~~~~~~~~--~~~v~~~~P~NPtG~~~~~~~~~~ 165 (354)
T PRK06358 92 -KP-KKVLILAPTFAEYERALKAFDAEIEYA-ELTEETNFAAN-EIVLEEIKEE--IDLVFLCNPNNPTGQLISKEEMKK 165 (354)
T ss_pred -CC-CcEEEecCChHHHHHHHHHcCCeeEEE-eCccccCCCcc-HHHHHhhccC--CCEEEEeCCCCCCCCccCHHHHHH
Confidence 34 689999999999999999999999999 8864 457788 6666656544 499999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~ 264 (400)
|+++|++||+++|+||+|..+.+++.... ....+++++++||||.+|++|+|+||++.++ +.+++.+.....
T Consensus 166 l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~--~~~~~~~~~~~~-- 241 (354)
T PRK06358 166 ILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN--KNLAEKLLQMRE-- 241 (354)
T ss_pred HHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC--HHHHHHHHHhCC--
Confidence 99999999999999999999887653221 1234689999999999999999999998864 677788877654
Q ss_pred CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
.++.+.+.+.++..+++. .+++.+.++.++++++.+.+.|+++++..+..+. ++|+|++++. ..++++.++ ++
T Consensus 242 ~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~~----~~~~~~~l~-~~ 314 (354)
T PRK06358 242 PWSINTFADLAGQTLLDD-KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS-VNFIFFKLEK----PIDLRKELL-KK 314 (354)
T ss_pred CCcchHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc-ceEEEEEcCc----hHHHHHHHH-HC
Confidence 567889999999999974 4667888888999999999999988666667676 6799999974 468888876 68
Q ss_pred CeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 345 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
||.+.+|..|+. ++++||+++. +++.+++++.|.+.+
T Consensus 315 gI~v~~~~~f~~~~~~~iRls~~~--~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 315 GILIRSCSNYRGLDENYYRVAVKS--REDNKKLLKALEVIL 353 (354)
T ss_pred CeEEEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 999999998843 5789999985 777777777776654
No 74
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.7e-42 Score=328.93 Aligned_cols=349 Identities=18% Similarity=0.261 Sum_probs=269.0
Q ss_pred CCeEEcCCCCCCC-CCc-HHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHH
Q 015768 30 KNAVSLAQGVVYW-QPP-KMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQA 101 (400)
Q Consensus 30 ~~~i~~~~~~~~~-~~~-~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a 101 (400)
++.|+|+.|.++. +.+ ..+.+++.+.+... ....|++..|.+++|+++++++.+.+| +++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 6789999999775 333 34555666665542 235798889999999999999988775 578999999999999
Q ss_pred HHHHHHHhcC-----CCCEEEE-eCCCccchhHHHHhcCc----EEEEeccCCCC--CCCCCHHHHHHhhccCCCCeEEE
Q 015768 102 FVNIVLTLCD-----AGDSVVM-FAPYYFNSYMSFQMTGV----THILVGPCSSK--TLHPDADWLEKTLETKPTPKLVS 169 (400)
Q Consensus 102 ~~~~~~~l~~-----~gd~vlv-~~p~~~~~~~~~~~~g~----~~~~~~~~~~~--~~~~~~e~l~~~l~~~~~~~~v~ 169 (400)
+..++.++++ +||.|++ ..|+|+++...++..+. ....+ +.+.+ ++.+|++.++ +..+ +++++
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~l~--~~~~--~~~i~ 184 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIE-LLPEGQFKYHVDFEHLH--IDED--TGAIC 184 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccc-cccccccccCCCHHHcc--cCCC--ceEEE
Confidence 9999999984 6899999 79999998876554432 12223 34333 3568888887 3333 48999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--CccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 170 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~ 247 (400)
+++||||||.+++.+++++|+++|++||+++|+||+|..+..... .......+++++++||||. +++|+|+||++.+
T Consensus 185 l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~ 263 (416)
T PRK09440 185 VSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIAD 263 (416)
T ss_pred EecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCC
Confidence 999999999999999999999999999999999999975432110 0001124688999999996 7899999999998
Q ss_pred CCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHH-HHHHHHHHHHHHHHHhccC-CC--CcccCCCCceE
Q 015768 248 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNREIIREALSPL-GE--GAVKGGEGAIY 321 (400)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~l~~~L~~~-~~--~~~~~~~~~~~ 321 (400)
+++++++.........+++.+.|.++..+++.+. .+..+ +++.++++++.+++.|++. +. +.+..|.+++|
T Consensus 264 ---~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~f 340 (416)
T PRK09440 264 ---EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIF 340 (416)
T ss_pred ---HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceE
Confidence 7899998887766667789999999999998743 22223 4555677777777777653 22 35567888999
Q ss_pred EEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---------CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 322 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+|++++....+..++...+ .++||.+.||..|.. .+++||+++. +++++++++++|++++++..++
T Consensus 341 iw~~~~~~~~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~-~~~~l~~~i~~l~~~~~~~~~~ 415 (416)
T PRK09440 341 LWLWFKDLPITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ-DDEEIEKGIAILAEEVEKAYAE 415 (416)
T ss_pred EEEECCCCCCCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEEEecC-CHHHHHHHHHHHHHHHHHHhhc
Confidence 9999986323567888876 589999999998742 2589999986 8999999999999999886654
No 75
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.2e-42 Score=322.48 Aligned_cols=330 Identities=18% Similarity=0.238 Sum_probs=267.6
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
+.++++|+.+.+++++|+.+++++.+.+.. ...|+ ..+..++|+++++++ ++++++|++|+|+++++..++.+
T Consensus 19 ~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~--~~~y~-~~~~~~lr~~ia~~~----~~~~~~i~it~Ga~~~l~~~~~~ 91 (356)
T PRK08056 19 PDQLLDFSANINPLGMPVSLKRAIIDNLDC--AERYP-DVEYRHLHQALARHH----QVPASWILAGNGETESIFAVVSG 91 (356)
T ss_pred hhhEEEeccccCCCCCCHHHHHHHHHHHHh--cccCc-CccHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHHH
Confidence 578999999999999999999999887764 34574 446889999999987 78899999999999999999998
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
+ .+|+ +++..|+|..+...++..|++++.+ |.++ +++.++ +.+++.+.+++ |++++++|+||||.+++.++++
T Consensus 92 l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~-~~~~~~~~~~~--k~v~l~~p~NPTG~~~~~~~~~ 165 (356)
T PRK08056 92 L-KPRR-AMIVTPGFAEYRRALQQVGCEIRRY-SLREADGWQLT-DAILEALTPDL--DCLFLCTPNNPTGLLPERQLLQ 165 (356)
T ss_pred h-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEE-ecccccCCCcc-HHHHHhccCCC--CEEEEeCCcCCCCCCCCHHHHH
Confidence 7 5776 6778999999999999999999999 8764 466666 34555565444 8999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCCc--cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~ 265 (400)
+|+++|++|++++|+||+|.++.+++... .....+++++++|+||.+|++|+|+||++.++ +++.+.+.... ..
T Consensus 166 ~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~--~~~~~~l~~~~--~~ 241 (356)
T PRK08056 166 AIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD--DAAVARMRRQQ--MP 241 (356)
T ss_pred HHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCC--HHHHHHHHHhC--CC
Confidence 99999999999999999999887654221 11234688999999999999999999999864 56777776543 35
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 345 (400)
++++.+.+.++..+++. .++.++.++.++++++++.+.|+.++++.+.++ +++|+|++++. +..+++..|+ ++|
T Consensus 242 ~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~l~-~~g 315 (356)
T PRK08056 242 WSINAFAALAGEVILQD-RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER---PDIDLQRALL-TQR 315 (356)
T ss_pred CchhHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC---ChHHHHHHHH-HCC
Confidence 66788888888888864 577778888899999999999998866555555 58999999874 3567888876 789
Q ss_pred eEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 346 VVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 346 i~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
|.+.+|..|.. ++++||+++. .++.+.+++.|++++
T Consensus 316 I~v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 316 ILIRSCANYPGLDSRYYRVAIRS--AAENERLLAALRNVL 353 (356)
T ss_pred eEEEECCCCCCCCCCEEEEEEcC--HHHHHHHHHHHHHHH
Confidence 99999998842 4799999985 666666666666543
No 76
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.3e-43 Score=325.79 Aligned_cols=328 Identities=22% Similarity=0.320 Sum_probs=272.1
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~ 107 (400)
++++++|+.+++++++|+.+++++.+.+.......|++ .+..++|+++++++ ++++ ++|++|+|+++++..++.
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~----~~~~~~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM----GVPAGADVLLGNGSDELIQLLAL 99 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh----CcCCCCcEEEcCCHHHHHHHHHH
Confidence 46899999999999999999999999887654677865 67899999999998 5554 589999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
++.++||+|+++.|+|..+...++..|++++.+ |.+++ +.+|++.+++.+.... ++++++++|+||||.+++.++++
T Consensus 100 ~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i-~~~~~-~~~d~~~l~~~~~~~~-~~~v~l~~p~NPtG~~~~~~~~~ 176 (356)
T PRK04870 100 ACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGV-PLTAD-FTLDLPAMLAAIAEHR-PALVFLAYPNNPTGNLFDDADVE 176 (356)
T ss_pred HhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEe-cCCCC-CCCCHHHHHHHhhcCC-CCEEEEcCCCCCCCCCCCHHHHH
Confidence 999999999999999999999999999999999 88754 5789999999886432 59999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~ 267 (400)
+|+++| ++++|+||+|..+............+++++++|+|| ++++|+|+||++++ +++++++..... .++
T Consensus 177 ~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~---~~~i~~~~~~~~--~~~ 247 (356)
T PRK04870 177 RIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH---PAWIAELDKVRP--PYN 247 (356)
T ss_pred HHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCC---HHHHHHHHHccC--CCc
Confidence 999988 789999999988764321111223467899999999 88899999999998 788888877653 456
Q ss_pred ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 347 (400)
.+.+.+.++..+++. .+++++.+++++++++.+.+.|++++++.+. +.+++|+|++++ +..++...+ +++||.
T Consensus 248 ~~~~~q~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~l-~~~gI~ 320 (356)
T PRK04870 248 VNVLTQATALFALEH-VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP----DAAAVFDGL-KTRGVL 320 (356)
T ss_pred CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC----CHHHHHHHH-HHCCEE
Confidence 788899888888875 4567788888999999999999988655554 455889999987 356777665 589999
Q ss_pred EeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 348 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 348 v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
+.+|..|+ .++++||+++. .++.+.++++|.++
T Consensus 321 v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~ 355 (356)
T PRK04870 321 VKNLSGMHPLLANCLRVTVGT--PEENAQFLAALKAA 355 (356)
T ss_pred EEECCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHHh
Confidence 99998875 36899999984 77777777777654
No 77
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-42 Score=325.07 Aligned_cols=326 Identities=24% Similarity=0.340 Sum_probs=268.4
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
+.++|+|+.|++++++|+.+++++.+. .. ...|+ ..+..++|+++++++ ++++++|++|+|+++++..++.+
T Consensus 51 ~~~~i~l~~n~~p~~~~~~v~~a~~~~-~~--~~~Yp-~~~~~~lr~~ia~~~----~~~~~~I~~t~Ga~~~i~~~~~~ 122 (380)
T PLN03026 51 PEDIVKLDANENPYGPPPEVLEALGNM-KF--PYVYP-DPESRRLRAALAEDS----GLESENILVGCGADELIDLLMRC 122 (380)
T ss_pred ccceEEccCCCCCCCCCHHHHHHHHhh-Hh--hccCC-CCCHHHHHHHHHHHh----CcChhhEEEcCCHHHHHHHHHHH
Confidence 568999999999999899999887653 11 34474 456788999999987 78899999999999999999999
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l-~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
+.++||+|++++|+|..+...++..|++++.+ |.++ ++.+|++.+++.+ .+++ ++|++++|+||||.+++.+++.
T Consensus 123 ~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~~~~~~~--~~v~l~~P~NPTG~~~~~~~l~ 198 (380)
T PLN03026 123 VLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKV-PRTP-DFSLDVPRIVEAVETHKP--KLLFLTSPNNPDGSIISDDDLL 198 (380)
T ss_pred hcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-ecCC-CCCcCHHHHHHHHhccCC--cEEEEeCCCCCCCCCCCHHHHH
Confidence 99999999999999988888888999999999 8754 4678999999988 4554 9999999999999999977777
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~ 266 (400)
+|++.+ +++|+||+|..+.+.+.... ....+++++++||||.+|++|+|+||++++ +++++.+.+... .+
T Consensus 199 ~l~~~~----~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~---~~~i~~l~~~~~--~~ 269 (380)
T PLN03026 199 KILELP----ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP---LSIIEYLWRAKQ--PY 269 (380)
T ss_pred HHHhcC----CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecC---HHHHHHHHHhcC--CC
Confidence 777532 89999999998876432221 123578999999999999999999999998 788888887664 56
Q ss_pred CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346 (400)
Q Consensus 267 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 346 (400)
+.+.+.+.++..+|+. .+++++.++.+.++++.+.+.|+++++..+ .|.+++|+|++++.. .+..++...|+ ++||
T Consensus 270 ~~~~~~q~aa~~aL~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~-~~~~~~~~~l~-~~gI 345 (380)
T PLN03026 270 NVSVAAEVAACAALSN-PKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSG-RDAKKLKEDLA-KMGV 345 (380)
T ss_pred CCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCC-CCHHHHHHHHH-HCCe
Confidence 7889999999999976 577888889999999999999999876444 456699999998753 25778888887 8999
Q ss_pred EEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 347 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 347 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
.++++..++.++++|||++. .++.+.+++.|++
T Consensus 346 ~v~~~~~~~~~~~lRis~~~--~~~~~~l~~al~~ 378 (380)
T PLN03026 346 MVRHYNSKELKGYIRVSVGK--PEHTDALMEALKQ 378 (380)
T ss_pred EEEECCCCCCCCEEEEecCC--HHHHHHHHHHHHH
Confidence 99998766667899999984 5666666666653
No 78
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-42 Score=323.16 Aligned_cols=338 Identities=24% Similarity=0.280 Sum_probs=278.2
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
++.+..++|+.|++++++++.+++++.+.... ...|++. +..++|+++++++ ++++++|++|+|+++++..++
T Consensus 29 ~g~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~----~~~~~~I~it~G~~~~l~~~~ 101 (369)
T PRK08153 29 RGRPFRARIGANESGFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH----GVAPENIMVGEGIDGLLGLIV 101 (369)
T ss_pred cCCcceeEecCCCCCCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHH
Confidence 44445679999999999999999999887643 4568654 5789999999987 788999999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
.+++++||.|+++.|+|+.+...++..|.+++.+ |.+.++ ++++.+++.+... ..+++++++|+||||.+++.+++
T Consensus 102 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v-p~~~~~--~~~~~l~~~~~~~-~~~~i~l~~P~NPtG~~~~~~~l 177 (369)
T PRK08153 102 RLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTV-PYRDDR--EDLDALLDAARRE-NAPLVYLANPDNPMGSWHPAADI 177 (369)
T ss_pred HHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEe-eCCCCC--CCHHHHHHHhccc-CCcEEEEeCCCCCCCCCCCHHHH
Confidence 9999999999999999999998888899999999 876553 5888887766432 24899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~ 265 (400)
.++++.|+ +++++|+||+|..+.+++.... ....+++++++||||.+|++|+|+||++++ +++++.+..... .
T Consensus 178 ~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~---~~~~~~l~~~~~--~ 251 (369)
T PRK08153 178 VAFIEALP-ETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGA---PGTIKAFDKVRN--H 251 (369)
T ss_pred HHHHHhCC-CCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecC---HHHHHHHHHhhc--C
Confidence 99999887 5999999999998876543211 113467899999999999999999999998 788888877664 4
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 345 (400)
++.+.+.+.++..+|++ .++.++.++.++++++.+.+.|++.+. .+. |.+++|+|++++.......++..++. ++|
T Consensus 252 ~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~-~~~-p~~~~f~~~~~~~~~~~a~~l~~~l~-~~G 327 (369)
T PRK08153 252 FGMNRIAQAAALAALKD-QAYLAEVVGKIAAARDRIAAIARANGL-TPL-PSATNFVAIDCGRDGAFARAVLDGLI-ARD 327 (369)
T ss_pred CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccC-CCcCcEEEEECCCCcccHHHHHHHHH-HCC
Confidence 67899999999999975 577888888999999999999988764 444 55689999998643234677888776 789
Q ss_pred eEEe-CCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 346 VVVI-PGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 346 i~v~-~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
|.+. |+.. ..++++|++++ ++++++.+++.|++++..+.+
T Consensus 328 i~v~~p~~~-~~~~~iRis~~--~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 328 IFVRMPGVA-PLDRCIRVSCG--PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred eEEeeCCCC-CCCCeEEEecC--CHHHHHHHHHHHHHHHHHhhc
Confidence 9995 6542 24679999998 589999999999998876543
No 79
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=3e-43 Score=330.30 Aligned_cols=340 Identities=29% Similarity=0.472 Sum_probs=284.4
Q ss_pred CeEEcCCCCCCCC----CcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCC-cEEEeCChHHHH
Q 015768 31 NAVSLAQGVVYWQ----PPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKS-SVMVTAGANQAF 102 (400)
Q Consensus 31 ~~i~~~~~~~~~~----~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~-~i~~~~g~t~a~ 102 (400)
++|+|+.+++... +++++++++.+ .........|++..|.+.+++++++++.+..+ ++++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 6899999998876 55666666654 23333377899999999999999999986665 4577 899999999999
Q ss_pred HHHHHHh-cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccC---C-CCeEEEEeCCCCC
Q 015768 103 VNIVLTL-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK---P-TPKLVSVVNPGNP 176 (400)
Q Consensus 103 ~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~---~-~~~~v~l~~p~np 176 (400)
..+...+ .++||+|+++.|+|+.+...++..|.+++.+ |.+ ++++.+|++++++.+++. . .++++++++|+||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nP 160 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPV-PLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNP 160 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEE-EEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeec-cccccccccccccccccccccccccccccceeeecccccc
Confidence 9999999 7899999999999999999999999999988 754 345678999999998852 1 2589999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-----cccCCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 251 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~ 251 (400)
||.+++.+++++|+++|++||+++|+||+|..+.++.... .......++++.|+||.+|++|+|+||++.+ +
T Consensus 161 tG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~---~ 237 (363)
T PF00155_consen 161 TGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP---P 237 (363)
T ss_dssp TTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE---H
T ss_pred cccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch---h
Confidence 9999999999999999999999999999999999875421 1223445899999999999999999999997 8
Q ss_pred HHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC
Q 015768 252 GFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 328 (400)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 328 (400)
++++.+......... +.+.+.++..++.... ++..++++.++++++.+.+.|++.+ +.+..+.+++|+|+.++.
T Consensus 238 ~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~ 314 (363)
T PF00155_consen 238 ELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIG-ITVLPPEAGFFLWVRLDP 314 (363)
T ss_dssp HHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEHHSBSSEEEEEESH
T ss_pred hhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhh-hheeeccCccEEEEEccc
Confidence 899998887764443 7888888888887633 2788899999999999999999885 477777789999999875
Q ss_pred CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768 329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
. +..+++++|++++||.+.||..|+.++++|++++..+++++++++++|
T Consensus 315 ~--~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 315 N--DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp H--HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred c--hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 3 467899999866699999999998899999999447999999999886
No 80
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.9e-42 Score=321.90 Aligned_cols=330 Identities=23% Similarity=0.320 Sum_probs=270.3
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
..+.++++|+.+.+++.+++.+.+++.+.... ...|++..| ..+|+++++++ ++++++|++|+|+++++..++
T Consensus 33 ~~~~~~i~l~~~~~~~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~ 105 (371)
T PRK05166 33 YGVPRIAKLGSNENPLGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART----GVPADRIILGNGSEDLIAVIC 105 (371)
T ss_pred cCCcceEEcCCCCCCCCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHH
Confidence 35668999999999988889999988775443 556877777 48999999887 788899999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
.++.++||+|+++.|+|+.+...++..|++++.+ +.+++ +.++++++++.+++++ +++++++|+||||.+++.+++
T Consensus 106 ~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~~~~~~--~~v~l~~p~NPtG~~~~~~~~ 181 (371)
T PRK05166 106 RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERV-TVTPD-LGFDLDALCAAVARAP--RMLMFSNPSNPVGSWLTADQL 181 (371)
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEe-ecCCC-CCCCHHHHHHhhhcCC--CEEEEeCCCCCCCCCCCHHHH
Confidence 9999999999999999999999999999999999 88654 4679999999887665 899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCccc-----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 261 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~ 261 (400)
++|+++|+ +++++|+||+|..+.+++..... ...+++++++||||.+|++|+|+||++.++ +++.+.+....
T Consensus 182 ~~l~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~--~~l~~~~~~~~ 258 (371)
T PRK05166 182 ARVLDATP-PETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD--PELVGLLDRVR 258 (371)
T ss_pred HHHHHhCC-CCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC--HHHHHHHHHhc
Confidence 99999886 48999999999988864321111 123578999999999999999999987643 78888887655
Q ss_pred ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768 262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 341 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (400)
. .++++.+.+.++..++.. .+++++.++.+.++++.+.+.|++.+. .+. +.+++|+|++++. +..++..+++
T Consensus 259 ~--~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-p~~g~fl~~~~~~---~~~~l~~~l~ 330 (371)
T PRK05166 259 T--PFNVNGAAQAAALAALDD-EEHLAKGVALALAERERLKKELAEMGY-RIA-PSRANFLFFDARR---PASAVAEALL 330 (371)
T ss_pred c--CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCcC-eeC-CCcCCEEEEeCCC---CHHHHHHHHH
Confidence 3 566788999888888875 477888888899999999999998854 554 4458999999763 4678888887
Q ss_pred HhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 342 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
++||.+.||..++.++++||+++. .++.+.+.+.|+.
T Consensus 331 -~~gi~v~p~~~~~~~~~iRi~~~~--~~~~~~l~~~l~~ 367 (371)
T PRK05166 331 -RQGVIVKPWKQPGFETFIRVSIGS--PEENDHFVAALDK 367 (371)
T ss_pred -HCCeEEecCCCCCCCCeEEEEcCC--HHHHHHHHHHHHH
Confidence 679999999877678999999996 4444444444443
No 81
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-41 Score=316.24 Aligned_cols=326 Identities=23% Similarity=0.321 Sum_probs=262.6
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
+..++|+.|.+++++|+.+++++.+.+.......|++ .+.+++|+++++++ ++++++|++|+|+++++..++.++
T Consensus 22 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-~~~~~lr~~ia~~~----~~~~~~i~it~G~~~~l~~~~~~l 96 (351)
T PRK14807 22 PYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-PTAEKLREELARYC----SVVPTNIFVGNGSDEIIHLIMLAF 96 (351)
T ss_pred CceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-ccHHHHHHHHHHHh----CCCcccEEEecCHHHHHHHHHHHh
Confidence 4679999999999999999999998876544566854 45788999999987 788999999999999999999999
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
+++||+|+++.|+|..+...++..|++++.+ +.+++ +.+|++.+++.++.. .+|+|++++|+||||.+++.+++.+
T Consensus 97 ~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~-~~k~v~l~~p~NPtG~~~~~~~l~~- 172 (351)
T PRK14807 97 INKGDVVIYPHPSFAMYSVYSKIAGAVEIPV-KLKED-YTYDVGSFIKVIEKY-QPKLVFLCNPNNPTGSVIEREDIIK- 172 (351)
T ss_pred cCCCCEEEEeCCChHHHHHHHHHcCCeEEEe-ecCCC-CCCCHHHHHHHhhcc-CCCEEEEeCCCCCCCCCCCHHHHHH-
Confidence 9999999999999998888889999999999 87654 568999999988742 2499999999999999999555555
Q ss_pred HHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 268 (400)
+|++++.++|+||+|..+. +..... ....+++++++||||.+|++|+|+||++.+ +++++.+..... .+..
T Consensus 173 --l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~---~~~~~~~~~~~~--~~~~ 244 (351)
T PRK14807 173 --IIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVAN---ENILKYLNLVKS--PYNI 244 (351)
T ss_pred --HHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecC---HHHHHHHHHccC--CCCc
Confidence 4556778899999998763 322111 223468999999999999999999999998 888888876654 4567
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 348 (400)
+.+.|.++..+++. .++.+..+.+.++++.+.+.|++++++.+.++ +++|+|++++ +.++++..+. ++||.+
T Consensus 245 ~~~~q~~~~~~l~~--~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~-~~~~~~i~~~----~~~~~~~~l~-~~gV~v 316 (351)
T PRK14807 245 NSLSQVIALKVLRT--GVLKERVNYILNERERLIKELSKIPGIKVYPS-KTNFILVKFK----DADYVYQGLL-ERGILV 316 (351)
T ss_pred CHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC-CccEEEEEcC----CHHHHHHHHH-HCCEEE
Confidence 88999999999974 45677777888888899999988755566544 5889999997 3667777775 789999
Q ss_pred eCCCc-cCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 349 IPGGA-CGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 349 ~~g~~-~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
.++.. ++.++++||+++. .++.+.+++.|+++
T Consensus 317 ~~~~~~~~~~~~iRis~~~--~~~~~~l~~~l~~~ 349 (351)
T PRK14807 317 RDFSKVEGLEGALRITVSS--CEANDYLINGLKEL 349 (351)
T ss_pred EECCCCCCCCCeEEEEcCC--HHHHHHHHHHHHHh
Confidence 87653 3457899999985 56666666666554
No 82
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-42 Score=319.11 Aligned_cols=329 Identities=20% Similarity=0.270 Sum_probs=268.2
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
++++|+|+.+.+++++++.+.+++.+.+... ...|+ ..+.+++|+++++++ ++++++|++|+|+++++..++++
T Consensus 23 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~-~~~y~-~~~~~~lr~aia~~~----~~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 23 LAKLIKLNTNENPYPPSPKVLEAIRAALGDD-LRLYP-DPNADALRQAIAAYY----GLDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred ccceeeccCCCCCCCCCHHHHHHHHHHhhhh-hhcCC-CCcHHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHHHH
Confidence 4678999999999988999999998877643 45685 446789999999998 68899999999999999999999
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
+.++||+|++++|+|+.+...++..|++++.+ |.+++ +.+|++.+++ . .+++++++||||||.++|.+++.+
T Consensus 97 l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~----~--~~~v~~~~P~NPtG~~~~~~~~~~ 168 (353)
T PRK05387 97 FFNHDRPLLFPDITYSFYPVYAGLYGIPYEEI-PLDDD-FSIDVEDYLR----P--NGGIIFPNPNAPTGIALPLAEIER 168 (353)
T ss_pred hcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEe-ecCCC-CCCCHHHHHh----c--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999988888889999999999 88654 5689888863 2 378899999999999999888888
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC-CcC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PIC 267 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~-~~~ 267 (400)
|++.++ ++++|+||+|..+............+++++++|+||.+|++|+|+||++.+ +++++++....... .++
T Consensus 169 l~~~~~--~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~---~~~~~~l~~~~~~~~~~~ 243 (353)
T PRK05387 169 ILAANP--DSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH---PELIEALNRVKNSFNSYP 243 (353)
T ss_pred HHHhCC--CcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC---HHHHHHHHHhhccCCCCC
Confidence 887543 999999999987632111111123467899999999999999999999988 78888888776432 467
Q ss_pred ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 347 (400)
++.+.+.++..++.. .++.++.++++.++++.+.+.|++++. .+. +.+++|+|++++. .+..++.+.|. ++||.
T Consensus 244 ~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~ 317 (353)
T PRK05387 244 LDRLAQAGAIAAIED-EAYFEETRAKVIATRERLVEELEALGF-EVL-PSKANFVFARHPS--HDAAELAAKLR-ERGII 317 (353)
T ss_pred cCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eEC-CCcCcEEEEECCC--CCHHHHHHHHH-HCCEE
Confidence 889999999888875 466778888899999999999998864 554 4458899999874 35778888875 78999
Q ss_pred EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 348 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 348 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+.+......++++|++++ +.+++++++++|++++.
T Consensus 318 v~~~~~~~~~~~iRis~~--~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 318 VRHFNKPRIDQFLRITIG--TDEEMEALVDALKEILA 352 (353)
T ss_pred EEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHHHhh
Confidence 975433334679999998 47899999999988764
No 83
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2e-41 Score=317.98 Aligned_cols=332 Identities=23% Similarity=0.327 Sum_probs=275.7
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
++.++++|+.+.+++++++.+++++.+.... ...|+.. +..++|+++++++ ++++++|++|+|+++++..++.
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~t~G~~~~l~~~~~ 102 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIRAAADE--LHRYPDG-SGFELKAALAEKF----GVDPERIILGNGSDEILELLAR 102 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHh--hcCCCCC-cHHHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence 6678999999999888889999999888754 4567544 3468999999987 7888999999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
++.++||+|+++.|+|..+....+..|++++.+ |.+ ++.+|++.+++.+++++ ++|++++|+||||.+++.+++.
T Consensus 103 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~~--~~~~~~~~l~~~~~~~~--~~v~l~~p~nptG~~~~~~~l~ 177 (367)
T PRK02731 103 AYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEV-PAK--DYGHDLDAMLAAVTPRT--RLVFIANPNNPTGTYLPAEEVE 177 (367)
T ss_pred HhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEe-ccc--CCCCCHHHHHHHhCCCC--cEEEEeCCCCCCCcCCCHHHHH
Confidence 999999999999999988888888899999988 774 34679999999887554 9999999999999999988888
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
++++.|+ +|+++|+||+|..+.+.+..... ...+++++++|+||.+|++|+|+||++++ +++++.+.....
T Consensus 178 ~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~---~~~~~~l~~~~~- 252 (367)
T PRK02731 178 RFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP---PEIIDALNRVRQ- 252 (367)
T ss_pred HHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC---HHHHHHHHHccC-
Confidence 8888775 69999999999887764422111 12467899999999999899999999998 788888887654
Q ss_pred CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768 264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (400)
.++.+.+++.++..+++. .++.++.++.++++++.+.+.|++.+. .+.+ .+++|+|++++.. .+..+++..|. +
T Consensus 253 -~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~-~~g~~~~i~~~~~-~~~~~~~~~L~-~ 326 (367)
T PRK02731 253 -PFNVNSLALAAAVAALDD-DAFVEKSRALNAEGMAWLTEFLAELGL-EYIP-SVGNFILVDFDDG-KDAAEAYQALL-K 326 (367)
T ss_pred -CCCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-ccCC-CCceEEEEECCCC-CCHHHHHHHHH-H
Confidence 456788999999999975 567788888889999999999998854 5553 4589999999543 36788888876 7
Q ss_pred cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+||.+.++..|+.++++|++++ +.++++.+++.|+++++
T Consensus 327 ~gI~v~~~~~~~~~~~iRis~~--~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 327 RGVIVRPVAGYGLPNALRITIG--TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCEEEEeCCCCCCCCeEEEecC--CHHHHHHHHHHHHHHHh
Confidence 8999999988766789999997 47888888888888764
No 84
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.4e-41 Score=317.66 Aligned_cols=311 Identities=17% Similarity=0.197 Sum_probs=252.5
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.+.++|+.+.+++++|+.+++++.+.+.. ...|++. +..++|+++++++ ++++++|++|+|+++++..++.++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~----~v~~~~I~it~G~~~~i~~~~~~l 94 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH----QLPPEWILPGNGAAELLTWAGREL 94 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHHHh
Confidence 46899999999999999999998887764 5668654 4678999999998 788999999999999999999987
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCC-C---CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-L---HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~---~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
. +||+|++++|+|+.+...++..|++++.+ |.++++ + ..+++.+++.. .. .+++++++||||||.+++.++
T Consensus 95 ~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~l~nP~NPTG~~~~~~~ 169 (360)
T PRK07392 95 A-QLRAVYLITPAFGDYRRALRAFGATVKEL-PLPLDQPSPGLTLRLQTLPPQL-TP--NDGLLLNNPHNPTGKLWSREA 169 (360)
T ss_pred C-CCCeEEEECCCcHHHHHHHHHcCCeEEEE-ecccccCCcccccCHHHHHHhc-cC--CCEEEEeCCCCCCCCCcCHHH
Confidence 5 68899999999999999999999999999 887554 2 23555555432 22 489999999999999999555
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 261 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~ 261 (400)
|.++++++++ +|+||+|..+.+++.... ....+++++++||||.+|++|+|+||++.+ +++++.+....
T Consensus 170 ---l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~---~~~~~~~~~~~ 242 (360)
T PRK07392 170 ---ILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH---PDRLQRWQQWR 242 (360)
T ss_pred ---HHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC---HHHHHHHHhhC
Confidence 5555667875 677999999887543211 123467999999999999999999999998 78888887655
Q ss_pred ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768 262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 341 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (400)
. .++++.+.|.++..+|++ .++.++..+.++++++++.+.|+.++++.+.. .+++|+|++++. +..+++.+++
T Consensus 243 ~--~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~~~~~---~~~~l~~~ll 315 (360)
T PRK07392 243 D--PWPVNGLAAAAAIAALAD-RDFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLVQSQG---SALQLQEKLL 315 (360)
T ss_pred C--CCCCCHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEEEcCC---CHHHHHHHHH
Confidence 3 577899999999999986 46667777778888999999999886655554 568999999874 5678888877
Q ss_pred HhcCeEEeCCCccCC--CCeEEEEecc
Q 015768 342 HRHGVVVIPGGACGC--RGHLRISFGG 366 (400)
Q Consensus 342 ~~~gi~v~~g~~~~~--~~~iRi~~~~ 366 (400)
+++||.+.||..|+. ++++||+++.
T Consensus 316 ~~~gv~v~pg~~f~~~~~~~iRi~~~~ 342 (360)
T PRK07392 316 QQHRILIRDCLSFPELGDRYFRVAVRT 342 (360)
T ss_pred hhCCEEEEeCCCCCCCCCCEEEEEeCC
Confidence 788999999998863 5799999996
No 85
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=1.7e-41 Score=317.04 Aligned_cols=324 Identities=21% Similarity=0.242 Sum_probs=263.3
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
++.++|+.+.+++++|+.+++++.+.+.. ...|++. +..++|+++++++ |+++++|++|+|+++++..++.++
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~----~v~~e~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE----GLPADHVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh----CcChhhEEEcCChHHHHHHHHHHH
Confidence 56899999999999999999999887754 3457544 4788999998876 889999999999999999999999
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
.++||+|++++|+|+.+...++..|.+++.+ |.+++ +.+|++.+++. .++ .+++++++||||||.+++.++++++
T Consensus 116 ~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~-~~~--~~~v~l~nP~NPTG~~~~~~~l~~l 190 (370)
T PRK09105 116 TSPTAGLVTADPTYEAGWRAADAQGAPVAKV-PLRAD-GAHDVKAMLAA-DPN--AGLIYICNPNNPTGTVTPRADIEWL 190 (370)
T ss_pred cCCCCEEEEeCCChHHHHHHHHHcCCeEEEe-cCCCC-CCCCHHHHHhc-CCC--CCEEEEeCCCCCCCcCcCHHHHHHH
Confidence 9999999999999999999999999999999 88654 56899998876 333 4899999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 268 (400)
++.|+ +++++|+||+|..+......... ...+++++++||||.+|++|+|+||++++ +++++.+... ....+
T Consensus 191 ~~~~~-~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~---~~~i~~l~~~---~~~~~ 263 (370)
T PRK09105 191 LANKP-AGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR---PDLLAKLARF---GHNPL 263 (370)
T ss_pred HHhCC-CCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecC---HHHHHHHHhc---CCCCc
Confidence 98764 59999999999876532111111 13568899999999999999999999998 7888888765 24557
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 348 (400)
+.+.+.++..+|.. .+|.++.++.+.++++.+.+.|++++. .+..+.+ .|++++++ .+..+++..|+ ++||.+
T Consensus 264 ~~~~~~aa~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~-~f~~~~~~---~~~~~l~~~L~-~~gI~v 336 (370)
T PRK09105 264 PVPAAAAGLASLRD-PKLVPQRRAENAAVREDTIAWLKKKGY-KCTPSQA-NCFMVDVK---RPAKAVADAMA-KQGVFI 336 (370)
T ss_pred CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-CcCCCCC-cEEEEeCC---CCHHHHHHHHH-HCCcEE
Confidence 88888888888875 578888888999999999999998864 6666764 45567775 25778998887 679999
Q ss_pred eCCCccC-CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 349 IPGGACG-CRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 349 ~~g~~~~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
. ..|. .++++|++++. +++++.+++.|++.+
T Consensus 337 ~--~~~~~~~~~~Ris~~~--~~~~~~l~~al~~~~ 368 (370)
T PRK09105 337 G--RSWPIWPNWVRVTVGS--EEEMAAFRSAFAKVM 368 (370)
T ss_pred e--cCCCCCCCeEEEEcCC--HHHHHHHHHHHHHHh
Confidence 3 3343 47899999984 677777777766554
No 86
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.6e-41 Score=318.64 Aligned_cols=316 Identities=19% Similarity=0.335 Sum_probs=254.2
Q ss_pred HHHHhhhcCc----hHHHHHHHHHhcCCCeEEcCCCCCC--------CC---------------------CcHHHHHHHH
Q 015768 7 LAKRALETEM----PIMVQIQELVRGAKNAVSLAQGVVY--------WQ---------------------PPKMAMEKVK 53 (400)
Q Consensus 7 ~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~--------~~---------------------~~~~v~~a~~ 53 (400)
+++|+.+... ....+..++.+.+.++|+|+.|+|+ +. .|++.+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~ 90 (407)
T PLN02368 11 LNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAK 90 (407)
T ss_pred cCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHH
Confidence 6667664332 2333444445678899999999986 31 1444444444
Q ss_pred Hhhc--CCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchhH
Q 015768 54 ELVW--DPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYM 128 (400)
Q Consensus 54 ~~~~--~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~ 128 (400)
+.+. ......|++..|..++|+++++++.+++| +++++|++|+|+++++..++.++. +|||+|++++|+|+.+..
T Consensus 91 ~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~ 170 (407)
T PLN02368 91 HYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA 170 (407)
T ss_pred HHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH
Confidence 4432 23366799899999999999999998877 568999999999999999999997 799999999999999999
Q ss_pred HHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 129 SFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 129 ~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
.++..|.+++.+ |.++ ++|.+|++.+++.+++. ..+|++++++||||||.+++.+++++|+++|++||++||+|
T Consensus 171 ~~~~~g~~~v~v-~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~D 249 (407)
T PLN02368 171 TISLLGGTLVPY-YLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGD 249 (407)
T ss_pred HHHHcCCEEEEE-ecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999999999999 8765 46789999999988631 13589999999999999999999999999999999999999
Q ss_pred ccccccccCCC-Cccc-------c-----CCCcEEEEecccccc-CCCcceeEEEEc---cCCcHHHHHHHHHhhccCCc
Q 015768 204 NTYEYFMYDGR-KHCC-------V-----EGDHVVNLFSFSKAY-GMMGWRVGYIAY---PSEVEGFATQLLKVQDNIPI 266 (400)
Q Consensus 204 ~a~~~~~~~~~-~~~~-------~-----~~~~~i~~~s~sK~~-g~~g~~~G~i~~---~~~~~~~~~~l~~~~~~~~~ 266 (400)
|+|..+.+++. ++.. . ..+++++++||||.| |++|+|+||++. + +++++.+..... ..+
T Consensus 250 E~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~---~~li~~~~~~~~-~~~ 325 (407)
T PLN02368 250 EVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP---PKTVEEIYKVAS-IAL 325 (407)
T ss_pred ccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC---HHHHHHHHHHhc-ccC
Confidence 99999998653 2211 1 134789999999998 899999999984 5 788888887643 466
Q ss_pred CccHHHHHHHHHHhcCCc-------HHH---HHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC
Q 015768 267 CASIISQHLALYSLQTGP-------EWV---TERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 327 (400)
Q Consensus 267 ~~~~~~~~~~~~~l~~~~-------~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 327 (400)
+++.+.|.++..+|+... ++. .++.+.++++++.+.+.|++++++.+..|+|++|+|++++
T Consensus 326 ~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 326 SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 789999999999997431 233 3467888999999999999997778888999999998765
No 87
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.3e-41 Score=316.87 Aligned_cols=325 Identities=22% Similarity=0.348 Sum_probs=270.0
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.++|+|+.+++++++|+++++++.++... ...|+...+ +++|+++++++ ++++++|++++|+++++..++.++
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~----~~~~~~i~~~~G~~~~l~~~~~~l 91 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY----GVDPEQILLGNGSDEIIELLIRAF 91 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh----CcChHHEEEcCCHHHHHHHHHHHh
Confidence 67999999999999999999999988643 456765554 88999999988 677899999999999999999999
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
.++||+|++++|+|+.+...++..|++++.+ |.+++ +.+|++.+++.+.+++ ++|++++|+||||.+++.+++.++
T Consensus 92 ~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~~~~~~--~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 92 LEPGDAVLVPPPTYSMYEISAKIHGAEVVKV-PLDED-GQLDLEDILVAIDDKP--KLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHcCCeEEEe-ccCCC-CCCCHHHHHHhcCCCC--CEEEEeCCCCCCCCCCCHHHHHHH
Confidence 9999999999999988888888999999999 88766 4689999999876555 999999999999999998888888
Q ss_pred HHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 268 (400)
++.|+ +++++|+|++|+.+...+..... ...+++++++|+||++|++|+|+||++.+ +++++.+..... .++.
T Consensus 168 ~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~--~~~~ 241 (346)
T TIGR01141 168 LERTP-EDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN---AEIIDALNKVRA--PFNL 241 (346)
T ss_pred HHhCC-CCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecC---HHHHHHHHhccC--CCCC
Confidence 88776 79999999999976653221111 12356788999999998899999999998 788888876543 4667
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 348 (400)
+.+++.++..+++.. .+..+.+++++++++.+++.|++++++.+.+ .+++|+|+.++. +.+++..+|. ++||.+
T Consensus 242 ~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~---~~~~~~~~L~-~~gI~v 315 (346)
T TIGR01141 242 SRLAQAAAIAALRDD-DFIEKTVEEINAERERLYDGLKKLPGLEVYP-SDANFVLIRFPR---DADALFEALL-EKGIIV 315 (346)
T ss_pred CHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC-CcCCEEEEecCC---CHHHHHHHHH-HCCeEE
Confidence 889999998888763 4678888999999999999999885556554 458899999874 5778888776 789999
Q ss_pred eCCCccCC-CCeEEEEeccCCHHHHHHHHHHH
Q 015768 349 IPGGACGC-RGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 349 ~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
.||..|+. ++++|++++ ++++++++++.|
T Consensus 316 ~~g~~f~~~~~~iRls~~--~~~~i~~~~~~l 345 (346)
T TIGR01141 316 RDLNSYPGLPNCLRITVG--TREENDRFLAAL 345 (346)
T ss_pred EeCCCcCCCCCeEEEecC--CHHHHHHHHHHh
Confidence 99987743 789999987 588888888765
No 88
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-41 Score=316.03 Aligned_cols=319 Identities=23% Similarity=0.302 Sum_probs=258.0
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
...++|+.+++++++++.+ .......|+ ......+++.+++++ |+++++|++|+|+++++..+++++
T Consensus 28 ~~~~~l~~Nenp~~~~~~~--------~~~~~~~Yp-~~~~~~l~~~~a~~~----g~~~~~I~~~~Gs~e~i~~~~~~~ 94 (351)
T PRK01688 28 NGDVWLNANEYPTAVEFQL--------TQQTLNRYP-ECQPKAVIENYAAYA----GVKPEQVLVSRGADEGIELLIRAF 94 (351)
T ss_pred CCceEecCCCCCCCCChhh--------cccccccCC-CCChHHHHHHHHHHh----CCCHHHEEEcCCHHHHHHHHHHHh
Confidence 3469999999999877653 111245573 334466666666665 899999999999999999999999
Q ss_pred cCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 110 ~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.++| |+|+++.|+|..+...++..|++++.+ |.+++ +.+|++.+++.+ .++ ++|++++||||||.+++.+++++
T Consensus 95 ~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v-~~~~~-~~~d~~~l~~~~-~~~--~lv~l~nPnNPTG~~~~~~~l~~ 169 (351)
T PRK01688 95 CEPGKDAILYCPPTYGMYSVSAETIGVEIRTV-PTLDN-WQLDLPAIADNL-DGV--KVVYVCSPNNPTGNLINPQDLRT 169 (351)
T ss_pred cCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEe-ecCCC-CCCCHHHHHHhc-cCC--cEEEEeCCCCCCCCCCCHHHHHH
Confidence 9987 999999999999999999999999999 88654 678999999877 344 99999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~ 267 (400)
|++.|++ +.++|+||+|..|........ ....+++++++||||.||++|+|+||++++ +++++.+.+... .++
T Consensus 170 l~~~~~~-~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~---~~~i~~l~~~~~--~~~ 243 (351)
T PRK01688 170 LLELTRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN---EEVINLLLKVIA--PYP 243 (351)
T ss_pred HHHhCCC-CcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC---HHHHHHHHhccC--CCC
Confidence 9998875 689999999998864322111 123578999999999999999999999988 889888887654 566
Q ss_pred ccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768 268 ASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 346 (400)
.+.+.+.++..+|+.. .+++.+.++.+.++++++.+.|++++++....|.+++|+|++++ +.+++.++|+ ++||
T Consensus 244 v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~----~~~~l~~~L~-~~gi 318 (351)
T PRK01688 244 LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT----ASSAVFKSLW-DQGI 318 (351)
T ss_pred CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----CHHHHHHHHH-HCCe
Confidence 7888888888888753 36777888888889999999999887654344556899999986 4678888886 7899
Q ss_pred EEeCCCcc-CCCCeEEEEeccCCHHHHHHHHHHH
Q 015768 347 VVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 347 ~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
.++++..+ +.++++||+++ ++++.+.+++.|
T Consensus 319 ~vr~~~~~~~~~~~iRis~~--~~~e~~~l~~al 350 (351)
T PRK01688 319 ILRDQNKQPGLSNCLRITIG--TREECQRVIDAL 350 (351)
T ss_pred EEEECCCcCCCCCeEEEeCC--CHHHHHHHHHhh
Confidence 99977654 55789999998 478888777766
No 89
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-40 Score=313.00 Aligned_cols=331 Identities=24% Similarity=0.319 Sum_probs=268.9
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~ 106 (400)
..++|+.+.+++++|+.+++++.+.+.. .....|+ ..|.+.+|+++++++.+.+| +++++|++|+|+++++..++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~ 105 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLL 105 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHH
Confidence 4699999999999999999999988753 2356784 56889999999999988875 56899999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
.+++++||.|+++.|+|+.+...++..|.+++.+ +.+ +++.+|++.+++.+.... ++++++++|+||||.+++.+++
T Consensus 106 ~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~-~~~-~~~~~d~~~l~~~~~~~~-~~~i~l~~p~NPtG~~~~~~~l 182 (368)
T PRK03317 106 QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEG-PRA-ADFTLDVDAAVAAIAEHR-PDVVFLTSPNNPTGTALPLDDV 182 (368)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEc-ccC-CCCCCCHHHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHH
Confidence 9999999999999999999999999999998888 654 346789999999887432 4899999999999999997777
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCcc-c--cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-C--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
++|++.| ++++|+||+|..+.+.+.... . ...+++++++||||.+|++|+|+||++++ +++++.+.....
T Consensus 183 ~~l~~~~---~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~---~~~~~~l~~~~~- 255 (368)
T PRK03317 183 EAILDAA---PGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA---PAVVDALRLVRL- 255 (368)
T ss_pred HHHHHHC---CceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC---HHHHHHHHhcCC-
Confidence 7776655 799999999998876543211 1 12357899999999999899999999998 888888876653
Q ss_pred CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768 264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (400)
+++.+++.+.++..+|+. .++..+.++++.++++.+.+.|++.+. .+..+.+++++|..++ +..++...+. +
T Consensus 256 -~~~~s~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~----~~~~~~~~l~-~ 327 (368)
T PRK03317 256 -PYHLSAVTQAAARAALRH-ADELLASVAALRAERDRVVAWLRELGL-RVAPSDANFVLFGRFA----DRHAVWQGLL-D 327 (368)
T ss_pred -CCCCCHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-EeCCCCCcEEEEeccC----CHHHHHHHHH-H
Confidence 677889999999999986 344455667788888889999988764 6677776777776654 4667777775 7
Q ss_pred cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+||.+.+. +.++++||+++ +.++++.+++.|.+++..
T Consensus 328 ~Gv~v~~~---~~~~~iRi~~~--~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 328 RGVLIRDV---GIPGWLRVTIG--TPEENDAFLAALAEVLAT 364 (368)
T ss_pred CCEEEEeC---CCCCeEEEecC--CHHHHHHHHHHHHHHHHH
Confidence 89999874 34789999997 477888888888877654
No 90
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.8e-40 Score=311.03 Aligned_cols=326 Identities=21% Similarity=0.339 Sum_probs=263.5
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEE-eCChHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV-TAGANQAFVNIV 106 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~-~~g~t~a~~~~~ 106 (400)
++.++++|+.++++++++|.+++++.+.+.. ...|+.. ..+++++++++++ +++++++++ ++|+++++..++
T Consensus 32 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~y~~~-~~~~lr~~ia~~~----~~~~~~i~~~~~Ga~~~i~~~~ 104 (361)
T PRK00950 32 DPESIIKLGSNENPLGPSPKAVEAIEKELSK--IHRYPEP-DAPELREALSKYT----GVPVENIIVGGDGMDEVIDTLM 104 (361)
T ss_pred CccceEEccCCCCCCCCCHHHHHHHHHHHHh--hcCCCCC-CHHHHHHHHHHHh----CCCHHHEEEeCCCHHHHHHHHH
Confidence 3458999999999999899999998887764 3457544 3488999999987 788899999 788899999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
.++.++||+|+++.|+|+.+...++..|++++.+ |.++ ++.++++.+++.+..++ +++++++|+||||.+++ .
T Consensus 105 ~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~-~~~~~~~~l~~~~~~~~--~~v~~~~p~nptG~~~~---~ 177 (361)
T PRK00950 105 RTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYA-KREE-DFSLDVDSVLNAITEKT--KVIFLCTPNNPTGNLIP---E 177 (361)
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-ecCC-CCCcCHHHHHHHhccCC--CEEEEeCCCCCCCCCcC---H
Confidence 9999999999999999998888889999999998 7543 45689999999887554 89999999999999999 4
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~ 266 (400)
+++.++|+++|+++|+|++|..+............+++++++|+||.+|++|+|+||++++ +++++.+..... .+
T Consensus 178 ~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~---~~~~~~~~~~~~--~~ 252 (361)
T PRK00950 178 EDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVP---EWLIDYYMRAKT--PF 252 (361)
T ss_pred HHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCC---HHHHHHHHHhcC--CC
Confidence 5566667788999999999987752111111123467899999999999999999999998 788888877654 45
Q ss_pred CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346 (400)
Q Consensus 267 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 346 (400)
+.+.+.+.++..+++. .+++++..+.++++++.+.+.|+ +.+. +.+++|+|++++. .+..+++.+|. ++||
T Consensus 253 ~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~--~~~~~~~~~l~-~~gv 323 (361)
T PRK00950 253 SLTRLSQAAAIAALSD-KEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTP--MTAKEFCEELL-KRGV 323 (361)
T ss_pred CCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCC--CCHHHHHHHHH-HCCE
Confidence 5788899888888875 46677777888888888888886 2343 4458999999943 36888998886 6899
Q ss_pred EEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 347 VVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 347 ~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
.+.||..|. .++++|++++ +.++++++++.|++++
T Consensus 324 ~v~~~~~f~~~~~~~lRis~~--~~~~~~~l~~~L~~il 360 (361)
T PRK00950 324 IVRDCTSFRGLGDYYIRVSIG--TFEENERFLEILKEIV 360 (361)
T ss_pred EEeeCCccCCCCCCeEEEECC--CHHHHHHHHHHHHHHh
Confidence 999988774 3579999998 4778899998888765
No 91
>PLN02397 aspartate transaminase
Probab=100.00 E-value=3.1e-40 Score=313.57 Aligned_cols=356 Identities=19% Similarity=0.194 Sum_probs=262.8
Q ss_pred hhcCchHHHHHHHHHh--cCCCeEEcCCCC-CCCCCcHH----HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 12 LETEMPIMVQIQELVR--GAKNAVSLAQGV-VYWQPPKM----AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 12 ~~~~~~~~~~~~~~~~--~~~~~i~~~~~~-~~~~~~~~----v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
.+.....+..+.+.++ .++..++++.|. ++...+|. +.++....+..+....|++..|.+++|+++++++.+.
T Consensus 28 ~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~ 107 (423)
T PLN02397 28 EPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGA 107 (423)
T ss_pred CcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCC
Confidence 3444445556666654 345678888886 55544443 3333333333333457999999999999999999765
Q ss_pred cCCC--CCcEEE--eCChH--HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCHHHHHH
Q 015768 85 NKLY--KSSVMV--TAGAN--QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEK 157 (400)
Q Consensus 85 ~~~~--~~~i~~--~~g~t--~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~e~l~~ 157 (400)
.+.. .++|.. +.+++ .++...+..+..|||+|++++|+|+.+...++..|++++.+ |. +++++.+|++.+++
T Consensus 108 ~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v-~l~~~~~~~~d~~~l~~ 186 (423)
T PLN02397 108 DSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTY-RYYDPKTRGLDFDGLLE 186 (423)
T ss_pred CCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEe-ecccCcCCccCHHHHHH
Confidence 4321 233321 23332 33444445555699999999999999999999999999999 87 34456789998888
Q ss_pred hhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Ccc---cc--CCCcEEEEec
Q 015768 158 TLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHC---CV--EGDHVVNLFS 229 (400)
Q Consensus 158 ~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~---~~--~~~~~i~~~s 229 (400)
.+... +..+++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. +.. .. ..+++++++|
T Consensus 187 ~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~S 266 (423)
T PLN02397 187 DLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQS 266 (423)
T ss_pred HHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEE
Confidence 77632 2237777889999999999999999999999999999999999999988541 111 11 2346899999
Q ss_pred cccccCCCcceeEEEE--ccCCcHHHHH----HHHHhhccCCcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHHH
Q 015768 230 FSKAYGMMGWRVGYIA--YPSEVEGFAT----QLLKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDLVRN 297 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~--~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~ 297 (400)
|||.++++|+|+||++ ..+ +++++ .+.........+++.+.|.++..+|+.+. .| ++++++.++++
T Consensus 267 fSK~~~~~G~RvG~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~r 344 (423)
T PLN02397 267 YAKNMGLYGERVGALSVVCKS--ADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISM 344 (423)
T ss_pred CcccCCCccccceEEEEEeCC--HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 322 44443 33344333445678889999888887631 23 56778899999
Q ss_pred HHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHH
Q 015768 298 REIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKA 374 (400)
Q Consensus 298 ~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~ 374 (400)
++.+.+.|++++. +.+..|++++|+|++++ ++++.+|++++||.+.++. |++++..+.+++++
T Consensus 345 r~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~------~~~~~~Ll~~~~V~v~~~~--------Ri~~~~~~~~~i~~ 410 (423)
T PLN02397 345 RQKLYDALEARGSPGDWSHITKQIGMFSFTGLN------KEQVDRMTKEYHIYMTRDG--------RISMAGLSSKNVPY 410 (423)
T ss_pred HHHHHHHHHhcCCCCCCCcccCCceEEEecCCC------HHHHHHHHHhCCEEECCCC--------eEEEeeCCHHHHHH
Confidence 9999999998852 46677999999999885 3588999999999997422 99998669999999
Q ss_pred HHHHHHHHHH
Q 015768 375 AADRLRRGLE 384 (400)
Q Consensus 375 ~~~~l~~~l~ 384 (400)
++++|++++.
T Consensus 411 ~~~~i~~~~~ 420 (423)
T PLN02397 411 LADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHh
Confidence 9999999974
No 92
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3e-40 Score=308.49 Aligned_cols=321 Identities=23% Similarity=0.276 Sum_probs=256.6
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~ 110 (400)
..+.++.+.+++++++.... ....|+.. +..++|+++++++ ++++++|++|+|+++++..++.++.
T Consensus 32 ~~~~~~~ne~~~~~~~~~~~---------~~~~Y~~~-~~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~~~~~ 97 (364)
T PRK04781 32 GDVWLNANESAWANPADPDA---------STRRYPDP-QPPGLRSALAALY----GCAPEQLLIGRGSDEAIDLLVRALC 97 (364)
T ss_pred CCEEeeCCCCCCCCChhhcc---------hhccCCCC-CHHHHHHHHHHHh----CcChHHEEEeCCHHHHHHHHHHHhc
Confidence 46889999988876653111 14557543 4688999999987 7889999999999999999999999
Q ss_pred CCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 111 DAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 111 ~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l-~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
.+| |.|+++.|+|..+...++..|.+++.+ |.+ ++++.+|++.+++.+ .++ +++|++++|+||||.+++.+++
T Consensus 98 ~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~~~~~~--~~lv~l~~p~NPTG~~~~~~~~ 174 (364)
T PRK04781 98 VPGRDAVLVTPPVFGMYAVCARLQNAPLVEV-PLVDGADGFHADVPAIVAAALASN--AKLVFLCSPSNPAGSAIALDQI 174 (364)
T ss_pred CCCCCeEEEcCCChHHHHHHHHHcCCEEEEE-ecCCCccCCCcCHHHHHHHHhccC--CeEEEEcCCCCCCCCCcCHHHH
Confidence 998 799999999988888888899999999 874 346778888876554 344 4999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~ 265 (400)
.++++.|+ +++++|+||+|..|.+...... ....+++++++||||.||++|+|+||++.+ +++++.+.+... .
T Consensus 175 ~~l~~~~~-~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~---~~l~~~l~~~~~--~ 248 (364)
T PRK04781 175 ERALQALQ-GKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN---AELIAVLRRCQA--P 248 (364)
T ss_pred HHHHHhCC-CCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCC---HHHHHHHHhccC--C
Confidence 99999885 5899999999998875432111 123578999999999999999999999998 899999887764 5
Q ss_pred cCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 266 ICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
++.+.+.+.++..+|+.+. ++..+..+.+.++++.+.+.|+++++.....|.+++|+|++++ +.+++...+. ++
T Consensus 249 ~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~----~~~~~~~~l~-~~ 323 (364)
T PRK04781 249 YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD----DAEAAFQALL-AA 323 (364)
T ss_pred CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC----CHHHHHHHHH-HC
Confidence 6778889999888998753 4566667788889999999999886543334666999999997 3567777664 89
Q ss_pred CeEEeCCCcc-CCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGAC-GCRGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 345 gi~v~~g~~~-~~~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
||.+.+|..| +.++++||+++. .++.+.+++.|++
T Consensus 324 gI~v~~~~~~~~~~~~~Ris~~~--~~~~~~l~~al~~ 359 (364)
T PRK04781 324 GVVVRDQRAAPRLSDALRITLGT--PEQNDRVLAALQR 359 (364)
T ss_pred CeEEeeCCCCCCCCCeEEEeCCC--HHHHHHHHHHHHH
Confidence 9999999765 356899999985 5666666665554
No 93
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-40 Score=304.98 Aligned_cols=322 Identities=18% Similarity=0.240 Sum_probs=258.0
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
++++++|+.+.+++++|+.+++++.+.+.. ...|++..|..++|+++++++ ++++++|++|+|+++++..++.
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~----~~~~~~I~it~Ga~~al~~~~~- 93 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH----GRTPDEVLLLAGAAEGFALLAR- 93 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh----CcChhhEEECCCHHHHHHHHHh-
Confidence 477999999999999999999999988764 456877789999999999997 7889999999999999999988
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
+ ++ +.+++..|+|..+...++..|.+++.+ |.+++ +.+|++.+ .++ ++++++++|+||||.+++.++
T Consensus 94 l-~~-~~viv~~P~y~~~~~~~~~~G~~i~~v-~~~~~-~~~d~~~l----~~~--~~~i~l~np~NPTG~~~~~~~--- 160 (349)
T PRK07908 94 L-RP-RRAAVVHPSFTEPEAALRAAGIPVHRV-VLDPP-FRLDPAAV----PDD--ADLVVIGNPTNPTSVLHPAEQ--- 160 (349)
T ss_pred c-CC-CeEEEeCCCChHHHHHHHHcCCEEEee-ccCcc-cCcChhHh----ccC--CCEEEEcCCCCCCCCCcCHHH---
Confidence 4 56 467788999999999999999999999 88765 56777654 333 489999999999999999655
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~ 267 (400)
|.++|+ ++.++|+||+|..+..+.... .....+++++++|+||.+|++|+|+||++.+ +++++.+..... .++
T Consensus 161 l~~l~~-~~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~---~~~~~~~~~~~~--~~~ 234 (349)
T PRK07908 161 LLALRR-PGRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA---PDVLARLTRGRA--HWP 234 (349)
T ss_pred HHHHHh-cCCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecC---HHHHHHHHhcCC--CCC
Confidence 555565 588999999999875432211 1123457899999999999999999999988 788888877654 355
Q ss_pred ccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768 268 ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 346 (400)
.+.+.+.++..++.. ..+++++.++.+.++++.+.+.|++++ +.+..|.+++|+|++++. .+.+...+ +++||
T Consensus 235 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~~~~~~----~~~~~~~l-~~~gI 308 (349)
T PRK07908 235 VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVLVRVPD----AELLRKRL-RERGI 308 (349)
T ss_pred ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEEEECCc----HHHHHHHH-HhCCE
Confidence 667777777777763 336778888899999999999999884 577777789999999984 45566555 68999
Q ss_pred EEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 347 VVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 347 ~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
.+.||..|. .++++|||++ ++++++++++.|++.+.
T Consensus 309 ~v~~g~~f~~~~~~~vRis~~--~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 309 AVRRGDTFPGLDPDYLRLAVR--PRAEVPVLVQALAEILK 346 (349)
T ss_pred EEEECCCCCCCCCCeEEEEeC--CCccHHHHHHHHHHHHh
Confidence 999999885 3689999997 46777777777766543
No 94
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-39 Score=301.27 Aligned_cols=317 Identities=22% Similarity=0.325 Sum_probs=253.2
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
.+++.++|+.|++++++|+.+++++.+.+.......|+ ..+.+++|+++++++++.+ +++++|++|+|+++++..++.
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~-~~~~~~Lr~aia~~~~~~~-~~~~~i~it~Ga~~~i~~~~~ 94 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYY-DSPDEELIEKILSYLDTDF-LSKNNVSVGNGADEIIYVMML 94 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCChHHHHHHHHHHhCCCC-CCcceEEEcCCHHHHHHHHHH
Confidence 45789999999999999999999998877654344464 4589999999999997653 789999999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
++ |.|++++|+|+.+...++..|++++.+ |.++++ .++.+. + .. .+++++++||||||.+++.++++
T Consensus 95 ~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~~-~~~~~~----~-~~--~~~i~i~nP~NPTG~~~s~~~l~ 161 (335)
T PRK14808 95 MF----DRSVFFPPTYSCYRIFAKAVGAKFLEV-PLTKDL-RIPEVN----V-GE--GDVVFIPNPNNPTGHVFEREEIE 161 (335)
T ss_pred Hh----CcEEECCCCHHHHHHHHHHcCCeEEEe-cCCCcC-CCChhH----c-cC--CCEEEEeCCCCCCCCCcCHHHHH
Confidence 88 679999999999999999999999999 887653 333221 2 22 38999999999999999988777
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~ 267 (400)
+|+ ++++++|+||+|..+............+++++++||||.+|++|+|+||++++ +++++++..... .++
T Consensus 162 ~l~----~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~---~~~~~~l~~~~~--~~~ 232 (335)
T PRK14808 162 RIL----KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSS---EKFIDAYNRVRL--PFN 232 (335)
T ss_pred HHH----hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeC---HHHHHHHHHhcC--CCC
Confidence 775 47999999999998742111111123468999999999999999999999999 788888877663 567
Q ss_pred ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 347 (400)
.+.+.+.++..+++. .++..+..+.+.++++.+.+.|++++ +.+..+. +.|+|+.++. .+..++.+.+. ++||.
T Consensus 233 ~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~-g~f~~~~l~~--~~~~~~~~~l~-~~Gi~ 306 (335)
T PRK14808 233 VSYVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMG-YRITDSR-GNFVFIFMEK--EEKERLLEHLR-AKNIA 306 (335)
T ss_pred CCHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC-CeEEEEeCCC--ccHHHHHHHHH-HCCeE
Confidence 788899998888875 45667777788888899999999886 4666665 7888999974 24567777665 89999
Q ss_pred EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 348 VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 348 v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
|+. | .+++||+++. .++.+.+++.|++
T Consensus 307 V~~---~--~~~~Risi~~--~~~~~~~~~~l~~ 333 (335)
T PRK14808 307 VRS---F--REGVRITIGK--REENDMILKELEV 333 (335)
T ss_pred EEE---C--CCCeEEecCC--HHHHHHHHHHHHh
Confidence 984 2 4789999985 6766666666653
No 95
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-39 Score=301.27 Aligned_cols=318 Identities=21% Similarity=0.344 Sum_probs=253.4
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
+.+.++|+.+.+++++|+.+++++.+++.......|+ ..|.+.+|+++++++ ++++++|++|+|+++++..++..
T Consensus 17 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~----~~~~~~I~~t~G~~~~l~~~~~~ 91 (337)
T PRK03967 17 GNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY----GLDAENIAVGNGSDELISYLVKL 91 (337)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHHHHH
Confidence 3578999999999998999999999888654456784 578999999999998 68899999999999999998887
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
+ +||+|+++.|+|..+...++..|++++.+ +.+++ +.+|++.+++.+ .++ +++++++|+||||.+++.+++.+
T Consensus 92 ~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~-~~~--~~v~~~~P~NPtG~~~~~~~l~~ 164 (337)
T PRK03967 92 F--EGKHIVITPPTFGMYSFYAKLNGIPVIDV-PLKED-FTIDGERIAEKA-KNA--SAVFICSPNNPTGNLQPEEEILK 164 (337)
T ss_pred h--CCCeEEEeCCChHHHHHHHHHcCCeEEEe-ecCCC-CCcCHHHHHHhc-cCC--CEEEEeCCCCCCCCCCCHHHHHH
Confidence 7 79999999999998888889999999999 87654 568999998765 334 88899999999999999665555
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 268 (400)
+ + ++++++|+||+|..+............+++++++||||.||++|+|+||++.+ +++++.+..... .++.
T Consensus 165 i---~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~---~~~i~~~~~~~~--~~~~ 235 (337)
T PRK03967 165 V---L-ETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIAN---EEIIDALYRIKP--PFSL 235 (337)
T ss_pred H---H-hcCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecC---HHHHHHHHhhcC--CCCC
Confidence 4 4 47999999999998753211111123467899999999999999999999998 788888887664 4567
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 348 (400)
+.+.+.++..+|+. .++..+..+.+.++++.+.+.|.+.. .+.+++|+|++++ +...|. ++||.+
T Consensus 236 ~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~-----~~~~~~~~~~~~~--------~~~~l~-~~gi~v 300 (337)
T PRK03967 236 NILTMKIVRLALDH-YDLIEERIDYIIKERERVRRELGEYA-----YPSDANFLLLKLD--------AYDYLL-ENGIVV 300 (337)
T ss_pred CHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHhccCc-----CCCCCcEEEEhHH--------HHHHHH-HCCEEE
Confidence 89999999999975 45666667777788888888887652 2556899998774 456665 689999
Q ss_pred eCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 349 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 349 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+++.. ..++++||+++. .++.+++++.|.++.+.
T Consensus 301 ~~~~~-~~~~~~Ri~~~~--~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 301 RKLSG-RLEGHIRVTVGK--REENDEFIKALKEIKEG 334 (337)
T ss_pred EeCCC-CCCCeEEEecCC--HHHHHHHHHHHHHHHHh
Confidence 87643 346799999985 56666777777665544
No 96
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=3e-39 Score=304.71 Aligned_cols=321 Identities=23% Similarity=0.256 Sum_probs=249.7
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCC---CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hc
Q 015768 59 PSISKYGADEGLPELRDALVKKLNQENK-LYK---SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MT 133 (400)
Q Consensus 59 ~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~---~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~ 133 (400)
....+|++..|.+++|+++++++.+..+ ..+ ++|++|+|+++++..++.++++|||+|++++|+|+.+...+. ..
T Consensus 35 ~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~ 114 (388)
T PRK08637 35 DEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRR 114 (388)
T ss_pred ccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhc
Confidence 3467899999999999999999877653 322 578999999999999999999999999999999999998765 57
Q ss_pred CcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-----cCCEEEEcccc
Q 015768 134 GVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-----AGSWLVVDNTY 206 (400)
Q Consensus 134 g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~-----~~~~li~D~a~ 206 (400)
|++++.+ |...++..+|++.+++.++ .....+++++++||||||.+++.+++++|+++|++ |++++|+||+|
T Consensus 115 g~~vv~v-~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y 193 (388)
T PRK08637 115 GAEIVTY-PIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAY 193 (388)
T ss_pred CCEEEEe-cccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccc
Confidence 9999999 8742333579999998876 22223567777899999999999999999998875 89999999999
Q ss_pred cccccCCCCcc----c--cCCCcE--EEEeccccccCCCcceeEEEEccC---CcHHHHHHHHHh----hccCCcCccHH
Q 015768 207 EYFMYDGRKHC----C--VEGDHV--VNLFSFSKAYGMMGWRVGYIAYPS---EVEGFATQLLKV----QDNIPICASII 271 (400)
Q Consensus 207 ~~~~~~~~~~~----~--~~~~~~--i~~~s~sK~~g~~g~~~G~i~~~~---~~~~~~~~l~~~----~~~~~~~~~~~ 271 (400)
.++.+++.... . ...+++ ++++|+||.++++|+|+||++.++ ..+++.+.+... .....+++|.+
T Consensus 194 ~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ 273 (388)
T PRK08637 194 FGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHP 273 (388)
T ss_pred hhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcH
Confidence 99987654321 1 122453 445699999989999999998642 125677766542 12233567899
Q ss_pred HHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768 272 SQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346 (400)
Q Consensus 272 ~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 346 (400)
.|.++..+++.+. .+..+.+..++++++.+.+.|+..+ .+.+..+.+++|+|++++. .+..+++.++++++||
T Consensus 274 ~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~--~~~~~l~~~l~~~~gv 351 (388)
T PRK08637 274 SQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG--VDAEELRVHLLEKYGI 351 (388)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh--HHHHHHHHHHhhhcce
Confidence 9999999997532 2234445567777777888887652 3567778889999999973 2567888888777899
Q ss_pred EEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 347 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 347 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+.+. .++++||+++..+.+++++++++|.++++++
T Consensus 352 ~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 352 GTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred EEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 98742 4679999999878999999999999999865
No 97
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7e-40 Score=305.37 Aligned_cols=318 Identities=22% Similarity=0.300 Sum_probs=254.2
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.+.++|+.+++++++++.+ ... ....|+.. +..++++++++++ |+++++|++|+|+++++..++.++
T Consensus 31 ~~~~~l~~ne~~~~~~~~~------~~~--~~~~Yp~~-~~~~Lr~aia~~~----~~~~~~I~it~Gs~~~i~~~~~~~ 97 (354)
T PRK04635 31 RGDIWINANESPFNNEYKL------DLA--RLNRYPEC-QPPELINAYSAYA----GVAPEQILTSRGADEAIELLIRAF 97 (354)
T ss_pred CCcEEeeCCCCCCCCChhh------hhH--HhccCCCC-CHHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHHHHHh
Confidence 4679999999999877643 111 14558544 5789999999986 899999999999999999999999
Q ss_pred cCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 110 ~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.++| |+|+++.|+|+.+...++..|++++.+ |.+++ +.++.+.++. + ++ +++|++++||||||.+++.+++.+
T Consensus 98 ~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v-~~~~~-~~~~~~~l~~-~-~~--~~li~i~nP~NPTG~~~~~~~l~~ 171 (354)
T PRK04635 98 CEPGQDSIACFGPTYGMYAISAETFNVGVKAL-PLTAD-YQLPLDYIEQ-L-DG--AKLVFICNPNNPTGTVIDRADIEQ 171 (354)
T ss_pred cCCCCCeEEEcCCChHHHHHHHHHcCCEEEEE-ecCCC-CCCCHHHHHh-c-cC--CCEEEEeCCCCCCCccCCHHHHHH
Confidence 9998 999999999999998899999999999 88654 5678888863 3 34 499999999999999999888888
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~ 267 (400)
|++.|+ ++++|+||+|..+....... .....++.++++||||++|++|+|+||++.+ +++++.+..... .++
T Consensus 172 l~~~~~--~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~---~~~~~~l~~~~~--~~~ 244 (354)
T PRK04635 172 LIEMTP--DAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLAN---EELIEILMRVIA--PYP 244 (354)
T ss_pred HHHhCC--CcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCC---HHHHHHHHhhcC--CCC
Confidence 888765 59999999999876432111 1123467899999999999999999999998 788888876543 566
Q ss_pred ccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768 268 ASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 346 (400)
.+.+.+.++..++... .++..+..+.+.++++.+.+.|++++.+.+.++. ++|+|++++ +..++.+.+ .++||
T Consensus 245 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~~----~~~~~~~~l-~~~gv 318 (354)
T PRK04635 245 VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGN-GNYVLAKFD----DVDAVFKAL-WDAGI 318 (354)
T ss_pred CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC-CcEEEEECC----CHHHHHHHH-HHCCE
Confidence 7788888888888752 3556777788888999999999998755666665 789999986 356777655 58999
Q ss_pred EEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 347 VVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 347 ~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
.++++..+..++++|||++ +.++++.++++|++
T Consensus 319 ~v~~~~~~~~~~~lRis~~--~~e~~~~l~~al~~ 351 (354)
T PRK04635 319 VARAYKDPRLANCIRFSFS--NRAETDKLIGLIRN 351 (354)
T ss_pred EEEECCCCCCCCeEEEEeC--CHHHHHHHHHHHHH
Confidence 9987654445789999997 47888777777754
No 98
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.2e-39 Score=298.14 Aligned_cols=310 Identities=18% Similarity=0.268 Sum_probs=242.9
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~ 110 (400)
++++|+.++++++.. . ....| |.....++++++++++ |+++++|++|+|+++++..++. +.
T Consensus 17 ~~i~l~~Nenp~~~~-----------~--~~~~Y-p~~~~~~lr~~ia~~~----~~~~~~I~it~Gs~~~l~~~~~-~~ 77 (332)
T PRK06425 17 RIIDFSANINDFMDI-----------G--DISIY-PEISYTDIEDQIKIYT----QGLKIKVLIGPGLTHFIYRLLS-YI 77 (332)
T ss_pred CEEEeccccCCCcCh-----------h--hcccC-cCcCHHHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH-Hh
Confidence 689999999888411 1 14457 4556789999999988 7889999999999999999997 45
Q ss_pred CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 111 ~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
++| .|++.+|+|+.+...++..|++++.+ |.++. ..+.+.+++ .+ ++++++++||||||.+++.+++++|+
T Consensus 78 ~~~-~vv~~~P~y~~y~~~~~~~G~~v~~v-p~~~~--~~~~~~l~~---~~--~k~v~l~nP~NPTG~~~s~~~~~~l~ 148 (332)
T PRK06425 78 NVG-NIIIVEPNFNEYKGYAFTHGIRISAL-PFNLI--NNNPEILNN---YN--FDLIFIVSPDNPLGNLISRDSLLTIS 148 (332)
T ss_pred CCC-cEEEeCCChHHHHHHHHHcCCeEEEE-eCCcc--cCcHHHHhh---cC--CCEEEEeCCCCCcCCccCHHHHHHHH
Confidence 776 46677999999999999999999999 88754 335554442 23 59999999999999999999999999
Q ss_pred HHHHHcCCEEEEcccccccccCCCCc-c--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKH-C--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~-~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~ 267 (400)
++|++|++++|+||+|.++.+++.+. . ....+++++++||||.+|++|+|+||++.+ +++++.+..... +++
T Consensus 149 ~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~---~~li~~l~~~~~--~~~ 223 (332)
T PRK06425 149 EICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD---DYNMKISRKITE--PWS 223 (332)
T ss_pred HHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC---HHHHHHHHHcCC--CCc
Confidence 99999999999999999988654211 1 113468999999999999999999999998 788888887554 344
Q ss_pred ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 347 (400)
.+.+.+.++. ... ...+.++.++.++++++.+.+.|++++. .+..+.+++|+|++++ +..++++.++ ++||.
T Consensus 224 ~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~~g~f~~~~~~----~~~~~~~~l~-~~gi~ 295 (332)
T PRK06425 224 VCDPAIDFIR-SID-LDYVAKHSLDIMENERSYLINNLEAMGF-RAAGDPSANFITFMIP----DAHDFYSYLL-KNGIL 295 (332)
T ss_pred cCHHHHHHHH-Hhh-hHHHHHHHHHHHHHHHHHHHHHHHHCCC-EECCCCCceEEEEEcC----CHHHHHHHHH-HCCeE
Confidence 4444433322 111 1245567788899999999999998864 5554445899999986 4678888887 68999
Q ss_pred EeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 348 VIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 348 v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
+.||..|+. ++++||+++. .++.+.+++.|++++
T Consensus 296 v~~~~~f~~~~~~~iRis~~~--~~~~~~l~~al~~~~ 331 (332)
T PRK06425 296 VRLLDDYECLGEQYIRIAIRR--RSFNIKLVNALRNFL 331 (332)
T ss_pred EEECCCCCCCCCCEEEEEeCC--HHHHHHHHHHHHHHh
Confidence 999998853 5799999985 677778887777654
No 99
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=4e-39 Score=300.64 Aligned_cols=325 Identities=27% Similarity=0.375 Sum_probs=264.6
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.++++|+.+.+++++++.+++++.+.+.. ...| +..|.+++|+++++++ ++++++|++++|+++++..++..+
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y-~~~g~~~lr~~ia~~~----~~~~~~I~~~~G~~~~l~~~~~~~ 94 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARAAAG--VNRY-PDMGAVELRAALAEHL----GVPPEHVAVGCGSVALCQQLVQAT 94 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHHHHh--cCcC-CCCcHHHHHHHHHHHh----CcCHHHEEECCCHHHHHHHHHHHh
Confidence 36899999999998889999999887753 4557 4578999999999998 678899999999999999999999
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
.++||+|+++.|+|..+...++..|++++.+ |.+++ +.++++.+++.+++++ +++++++|+||||.++|.+++.++
T Consensus 95 ~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~~~~~~--~~v~l~~p~NPtG~~~~~~~l~~l 170 (352)
T PRK03321 95 AGPGDEVIFAWRSFEAYPILVQVAGATPVQV-PLTPD-HTHDLDAMAAAITDRT--RLIFVCNPNNPTGTVVTPAELARF 170 (352)
T ss_pred cCCCCEEEeCCCCHHHHHHHHHHcCCEEEEc-cCCCC-CCCCHHHHHHhhccCC--CEEEEeCCCCCcCCCcCHHHHHHH
Confidence 9999999999999988888888999999999 88744 3679999999887655 999999999999999997777777
Q ss_pred HHHHHHcCCEEEEcccccccccCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~ 265 (400)
++.| ++++++|+||+|..+.+++.... ....+++++++|+||.+|++|+|+||++.+ +++++.+.+.. ..
T Consensus 171 ~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~---~~~~~~~~~~~--~~ 244 (352)
T PRK03321 171 LDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH---PEVIAALRKVA--VP 244 (352)
T ss_pred HHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC---HHHHHHHHHhc--CC
Confidence 7655 36999999999998887543211 112468899999999999999999999998 78888887653 46
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 345 (400)
++.+.+++.++..++... +...+..+...++++.+.+.|++.+. .+.++ +++|+|++++. +..++.+.| +++|
T Consensus 245 ~~~s~~~q~~a~~~l~~~-~~~~~~~~~~~~~r~~~~~~L~~~~~-~~~~~-~g~~i~i~l~~---~~~~~~~~l-~~~g 317 (352)
T PRK03321 245 FSVNSLAQAAAIASLAAE-DELLERVDAVVAERDRVRAALRAAGW-TVPPS-QANFVWLPLGE---RTADFAAAA-AEAG 317 (352)
T ss_pred CCCCHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHCCC-ccCCC-CCCEEEEeCCC---CHHHHHHHH-HHCC
Confidence 778999999888888753 33445555666677888899988754 44444 48899999863 467888877 4799
Q ss_pred eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
|.+.+ |+ .+++||+++ +.++.+.++++|.+++.
T Consensus 318 I~v~~---~~-~~~iRi~~~--~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 318 VVVRP---FA-GEGVRVTIG--APEENDAFLRAARAWRA 350 (352)
T ss_pred EEEEc---cC-CCcEEEeeC--CHHHHHHHHHHHHHHhc
Confidence 99987 32 457999997 48888888888887654
No 100
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=281.02 Aligned_cols=323 Identities=25% Similarity=0.387 Sum_probs=271.0
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh-cCc
Q 015768 61 ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGV 135 (400)
Q Consensus 61 ~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~ 135 (400)
...|.+-.|...+|+++|+++.+..| .+|+++++++|+|.+++.++.+|..|||..+++.|.|+++...++. .|+
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv 193 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 193 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence 44677779999999999999988764 3589999999999999999999999999999999999999988775 578
Q ss_pred EEEEeccCC-CCCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 136 THILVGPCS-SKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
+++++ ... .+|++++.+.+|.++. .+..+|.|+|+||+||.|..++++++..+.+++.++|+.+|+||+|..-.
T Consensus 194 eivpv-~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 194 EIVPV-HCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred eEEEE-EeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 99888 554 5678999999999886 34447999999999999999999999999999999999999999999888
Q ss_pred cCCCCcccc---------CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhc
Q 015768 211 YDGRKHCCV---------EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQ 281 (400)
Q Consensus 211 ~~~~~~~~~---------~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 281 (400)
++...+.+. ..+++-++.|+||-+|+||+|+|.|.+.+ +++.....+... ....+...|..++..|.
T Consensus 273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n--e~VvsaA~kmss--f~~vSs~tQ~~la~LLS 348 (471)
T KOG0256|consen 273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN--EDVVSAATKMSS--FGLVSSQTQYLLASLLS 348 (471)
T ss_pred cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC--hHHHHHHHHHhh--ccCCcHHHHHHHHHHhc
Confidence 876654321 35678889999999999999999999998 778777776654 44568889999999988
Q ss_pred CCc---HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCc
Q 015768 282 TGP---EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGA 353 (400)
Q Consensus 282 ~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~ 353 (400)
+.. .++.+..++++.+..++.+.|++++. .+....+|.|+|+++...- ...-++.+.++.+-++.+.||..
T Consensus 349 D~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI-~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s 427 (471)
T KOG0256|consen 349 DEEFTREYLRENNKRLRIRHRYIVEGLKALGI-PCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSS 427 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCC-ceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCc
Confidence 722 45677778888888999999999886 7777778999999986421 12346777788666999999998
Q ss_pred cC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 354 CG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 354 ~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
|. .++|+|+||+.+.++.++-+++||+.++.+..+.
T Consensus 428 ~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~~~ 465 (471)
T KOG0256|consen 428 CHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQVQP 465 (471)
T ss_pred ceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhhcc
Confidence 86 5899999999877777777999999999866543
No 101
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.3e-38 Score=294.07 Aligned_cols=313 Identities=19% Similarity=0.222 Sum_probs=247.9
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~ 108 (400)
.++++|+.+.+++++|+..+.. .. ...|+. .. .++++++++++ |++ +++|++|+|+++++..+..
T Consensus 24 ~~~i~ls~Nenp~~~~~~~~~~--~~-----~~~Yp~-~~-~~L~~~ia~~~----~~~~~~~I~i~~Gs~e~i~~l~~- 89 (339)
T PRK06959 24 DAWLDLSTGINPHGYPVPPVPA--DA-----WRRLPE-DD-DGLAACAARYY----GAPDAAHVLPVAGSQAAIRALPA- 89 (339)
T ss_pred hhhceeccCCCCCCCCCCCCCH--HH-----HHhCCC-ch-HHHHHHHHHHh----CCCCcccEEECcCHHHHHHHHHH-
Confidence 4579999999999766322221 11 233743 33 78888888877 776 5899999999999987654
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
+.++|+ |+++.|+|+.+...++..|++++.+ +.++ +.+ ... .+++++++||||||.+++.+++++
T Consensus 90 ~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v-~~~~-------~~~----~~~--~~~v~l~nPnNPTG~~~s~~~l~~ 154 (339)
T PRK06959 90 LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPL-DEAA-------DTL----PAA--LTHLIVVNPNNPTAERLPAARLLR 154 (339)
T ss_pred hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEee-cccc-------hhc----ccc--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 567776 8899999999999999999999988 7653 112 122 378999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA 268 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~ 268 (400)
+++.|.+++.++|+||+|..+............+++++++||||.||++|+|+||++++ +++++.+.+... +++.
T Consensus 155 l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~---~~li~~l~~~~~--~~~v 229 (339)
T PRK06959 155 WHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA---PALLAALRDALG--AWTV 229 (339)
T ss_pred HHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecC---HHHHHHHHHhcC--CCCC
Confidence 99999889999999999998865322111123467899999999999999999999998 899999988764 5667
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 348 (400)
+.+.|.++..+|++ .++.++.++.+.++++++.+.|++++. .+. + +++|+|++++ +..++...|. ++||.+
T Consensus 230 s~~~q~a~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~g~-~~~-~-~~~f~~~~~~----~~~~l~~~l~-~~GI~v 300 (339)
T PRK06959 230 SGPARHAVRAAFAD-AAWQAAMRERLAADGARLAALLRAHGF-AVH-A-TPLFSWTDDP----RAAALHAALA-RRGIWT 300 (339)
T ss_pred cHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCC-Ccc-C-cceEEEEeCC----CHHHHHHHHH-hCCeEE
Confidence 89999999999986 567788889999999999999999864 444 3 4789999876 3567888776 789999
Q ss_pred eCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 349 IPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 349 ~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+. |...+++||+++. ++++.+.+++.|++++..+...
T Consensus 301 r~---~~~~~~lRisi~~-~~~e~~~l~~al~~~~~~~~~~ 337 (339)
T PRK06959 301 RY---FAPPPSVRFGLPA-DEAEWQRLEDALAECVPTLAAA 337 (339)
T ss_pred EE---CCCCCeEEEECCC-CHHHHHHHHHHHHHHHHHHhhc
Confidence 74 4456799999964 6788899999998888776543
No 102
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1e-37 Score=287.71 Aligned_cols=305 Identities=21% Similarity=0.300 Sum_probs=235.5
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~ 110 (400)
++|+|+.+.+++++++..+.. .. ...|+. +...+|+++++++ + +++|++|+|+++++..+.. .
T Consensus 21 ~~i~l~~ne~p~~~~~~~~~~--~~-----~~~yp~--~~~~Lr~~ia~~~----~--~~~I~it~Gs~~al~~~~~--~ 83 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAIPA--DA-----WARLPE--TDDGLEAAARAYY----G--APQLLPVAGSQAAIQALPR--L 83 (330)
T ss_pred HheeecCCcCCCCCCCcccCH--HH-----HHhCCC--ChHHHHHHHHHHh----C--CCCEEECcCHHHHHHHHHH--c
Confidence 579999999887655322211 11 122633 2378999999998 4 4799999999999998863 5
Q ss_pred CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 111 ~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
.+||+|++++|+|+.+...++..|++++.+ |.+ .+++.+. ++ +++++++||||||.+++.+++++|+
T Consensus 84 ~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~---------~~~~~~~-~~--~~v~l~nP~NPTG~~~s~~~l~~l~ 150 (330)
T PRK05664 84 RAPGRVGVLSPCYAEHAHAWRRAGHQVREL-DEA---------EVEAALD-SL--DVLVVVNPNNPTGRRFDPARLLAWH 150 (330)
T ss_pred cCCCEEEEcCCChHHHHHHHHHcCCeEEEe-chh---------hHhhhhc-CC--CEEEEeCCcCCCCCccCHHHHHHHH
Confidence 799999999999999999999999999988 643 3444443 33 7899999999999999999999999
Q ss_pred HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccH
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASI 270 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~ 270 (400)
++|+++++++|+||+|..+............+++++++||||.+|++|+|+||++.+ +++++.+..... +++.+.
T Consensus 151 ~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~---~~l~~~~~~~~~--~~~~~~ 225 (330)
T PRK05664 151 ARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE---PALLRALAELLG--PWTVSG 225 (330)
T ss_pred HHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeC---HHHHHHHHHhcC--CCCCCH
Confidence 999999999999999987653221111223467899999999999999999999998 788888887654 456788
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC
Q 015768 271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP 350 (400)
Q Consensus 271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~ 350 (400)
+.+.++..+|.. ..+.++.++.+.++++.+.+.|++++. ...+ ...+|+|++++ +..++...|. ++||.+..
T Consensus 226 ~~~~~~~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~~-~~~~f~~~~~~----~~~~~~~~l~-~~gi~v~~ 297 (330)
T PRK05664 226 PTRWLAQAALAD-TPWQRRQRERLLAASQRLAALLRRHGL-TPAG-GCALFQWVRTE----DAAALHEFLA-RRGILTRL 297 (330)
T ss_pred HHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHHCCC-cccC-CcceEEEEecC----CHHHHHHHHH-HCCeEEEE
Confidence 889999999986 456677888899999999999998754 3222 22488898875 4678887765 88999974
Q ss_pred CCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 351 GGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 351 g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
|..++++||+++. +.++.+++.+.|++.
T Consensus 298 ---f~~~~~iRis~~~-~~~~~~~l~~al~~~ 325 (330)
T PRK05664 298 ---FEQPASLRFGLPA-DEADWARLDQALLAY 325 (330)
T ss_pred ---CCCCCeEEEECCC-CHHHHHHHHHHHHHH
Confidence 4456899999995 566655555555444
No 103
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=3e-38 Score=291.41 Aligned_cols=311 Identities=24% Similarity=0.362 Sum_probs=250.9
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
+++.++|+.|.+++++| +.+... .....|+... .+++|+.+++++ ++++++|++|+|+++++..+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~y~~~~-~~~lr~~la~~~----~~~~~~i~~t~G~~~~i~~~~~~ 83 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPP--VPPIPA-----SAWARYPDPE-YDELRAAAAAYY----GLPAASVLPVNGAQEAIYLLPRL 83 (330)
T ss_pred hhheeEccccCCCCCCC--hhhcch-----HHHhhCCCcc-HHHHHHHHHHHh----CCChhhEEECCCHHHHHHHHHHH
Confidence 46789999999888755 222211 1145576555 489999999987 77889999999999999998766
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
+ .+| .|++++|+|..+...++..|++++.+ + |++.+++.+. + .+++++++|+||||.+++.+++++
T Consensus 84 l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~-~--------d~~~l~~~~~-~--~~~v~i~~p~NPtG~~~~~~~~~~ 149 (330)
T TIGR01140 84 L-APG-RVLVLAPTYSEYARAWRAAGHEVVEL-P--------DLDRLPAALE-E--LDVLVLCNPNNPTGRLIPPETLLA 149 (330)
T ss_pred h-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEe-C--------CHHHHHhhcc-c--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 4 677 79999999999999999999999988 5 6788888873 3 378999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCccc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~ 267 (400)
|+++|++||+++|+|++|..+......... ...+++++++|+||.+|++|+|+||++.+ +++++.+..... .++
T Consensus 150 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~---~~~~~~l~~~~~--~~~ 224 (330)
T TIGR01140 150 LAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH---PALLARLREALG--PWT 224 (330)
T ss_pred HHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCC---HHHHHHHHhcCC--CCC
Confidence 999999999999999999987754211111 12478899999999999999999999998 788888887654 456
Q ss_pred ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeE
Q 015768 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVV 347 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~ 347 (400)
.+.+++.++..+++. .+|..+.+++++++++.+.+.|++++.+.+.+ .+++|+|+.++. ..+++++|+ ++||.
T Consensus 225 ~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~f~~~~~~~----~~~l~~~l~-~~gi~ 297 (330)
T TIGR01140 225 VNGPARAAGRAALAD-TAWQAATRARLAAERARLAALLARLGGLEVVG-GTALFLLVRTPD----AAALHEALA-RRGIL 297 (330)
T ss_pred chHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhCCCceECC-CCCeEEEEEcCC----HHHHHHHHH-HCCEE
Confidence 788899999989885 46677888999999999999999987655544 458999999873 568888886 68999
Q ss_pred EeCCCccC--CCCeEEEEeccCCHHHHHHHHHHH
Q 015768 348 VIPGGACG--CRGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 348 v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
+.||..|. .++++|++++. +.++ +.++++|
T Consensus 298 v~pg~~f~~~~~~~iRi~~~~-~~~~-~~~~~~l 329 (330)
T TIGR01140 298 IRDFDNFPGLDPRYLRFALPT-DEEN-DRLEEAL 329 (330)
T ss_pred EEECCCCCCCCCCEEEEEecC-HHHH-HHHHHhh
Confidence 99999885 45799999986 4444 5555544
No 104
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.6e-37 Score=284.10 Aligned_cols=300 Identities=21% Similarity=0.312 Sum_probs=225.9
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.++|+|+.+.++++ |+.+.+++.+++.. ...|+. ...+++++++++ + ++|++|+|+++++..++..+
T Consensus 8 ~~~i~l~~~~np~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~----~---~~I~vt~G~~~al~~~~~~~ 74 (311)
T PRK08354 8 EGLIDFSASVNPYP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLF----G---EPIVITAGITEALYLIGILA 74 (311)
T ss_pred cceeEecCCCCCCC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHH----C---CCEEECCCHHHHHHHHHHhh
Confidence 46899999988886 57888888877654 345642 467888888876 3 57999999999999888554
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
.+||+|+++.|+|+.+...++..|++++.+ + +|++.+++.++ ++ +++++++|+||||.+++.+++++|
T Consensus 75 -~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-~-------~d~~~l~~~~~-~~--~~vi~~~P~NPTG~~~~~~~l~~l 142 (311)
T PRK08354 75 -LRDRKVIIPRHTYGEYERVARFFAARIIKG-P-------NDPEKLEELVE-RN--SVVFFCNPNNPDGKFYNFKELKPL 142 (311)
T ss_pred -CCCCeEEEeCCCcHHHHHHHHHcCCEEeec-C-------CCHHHHHHhhc-CC--CEEEEecCCCCCCCccCHHHHHHH
Confidence 489999999999999999999999998766 3 46778887775 33 789999999999999999999999
Q ss_pred HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCcc
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 269 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (400)
+++|+++|+++|+||+|.++.+++.. ...+++++++||||.+|++|+|+||+++. . +.++.... .+..+
T Consensus 143 ~~~a~~~~~~li~De~y~~f~~~~~~---~~~~~vi~~~S~SK~~~l~GlRiG~~v~~---~---~~l~~~~~--~~~~~ 211 (311)
T PRK08354 143 LDAVEDRNALLILDEAFIDFVKKPES---PEGENIIKLRTFTKSYGLPGIRVGYVKGF---E---EAFRSVRM--PWSIG 211 (311)
T ss_pred HHHhhhcCcEEEEeCcchhccccccc---cCCCcEEEEeccHhhcCCccceeeeeeeh---H---HHHHHcCC--CccCC
Confidence 99999999999999999998876422 23678999999999999999999999873 3 34444443 44556
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe
Q 015768 270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 349 (400)
Q Consensus 270 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 349 (400)
.+.+.++..+++...+++.+.++.+.+.++.+.+.+ ...+. +.|++++++ +..++++.+. ++||.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-------~~~~~-~~~~~~~~~----~~~~~~~~l~-~~gv~v~ 278 (311)
T PRK08354 212 STGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKAL-------YVKSD-ANFFIKDVG----DAEKFVEFLK-RNGILVR 278 (311)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc-------CCCCC-CcEEEEECC----CHHHHHHHHH-HCCeEEE
Confidence 666666666665322344444444454444444433 12355 555556664 4677888775 7899999
Q ss_pred CCCccCCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768 350 PGGACGCRGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 350 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
||..|+.++++||+++. +++.+++++.|+
T Consensus 279 ~g~~f~~~~~iRi~~~~--~~~~~~l~~al~ 307 (311)
T PRK08354 279 DCTSFGLPGYIRFSVRD--REENEKLIRALR 307 (311)
T ss_pred ecccCCCCCeEEEEeCC--HHHHHHHHHHHH
Confidence 99999878999999996 344444444443
No 105
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=3.7e-36 Score=280.91 Aligned_cols=339 Identities=31% Similarity=0.485 Sum_probs=278.5
Q ss_pred EEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHhc
Q 015768 33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC 110 (400)
Q Consensus 33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~ 110 (400)
++|+.+.+++..++.+++++.+.........|.+..+..++++.+++++...++. .++++++++|+|+++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 5788999988888888887766222233556778899999999999999888763 36789999999999999999999
Q ss_pred CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCH--HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 111 DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA--DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 111 ~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
++||+|+++.++|+++...++..|.+++.+ +.++++. .+. +.++....++ +++|++++++||+|.++|.+++.+
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-~~~~~~~~~~~~~~~--~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPV-PLDEEGG-FLLDLELLEAAKTPK--TKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEE-ecccccC-CccCHHHHHhhcCcc--ceEEEEECCCCCCCcccCHHHHHH
Confidence 999999999999999999999999999999 8876653 232 5555554444 599999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~ 264 (400)
|.++|+++|+++|+|++|+.+.+.+... .....+.+++++|++|+++.+|.++|+++.++ +++.+.+.......
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~--~~~~~~~~~~~~~~ 234 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP--EELLERLKKLLPYT 234 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH--HHHHHHHHHHHHhc
Confidence 9999999999999999999887655432 23345678999999999987899999999983 27888888777666
Q ss_pred CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
+.+++...+.++..+++...++.++..+.+.++++++.+.|++.+...+..+.+++++|++++.. ...+...+++.++
T Consensus 235 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~l~~~ 312 (350)
T cd00609 235 TSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG--DDEEFLERLLLEA 312 (350)
T ss_pred ccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC--ChHHHHHHHHHhC
Confidence 67889999999999998754677888899999999999999998774434566689999998754 2344555566789
Q ss_pred CeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 345 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
||.+.++..|. .+.++|++++.. .+|++.++++|+
T Consensus 313 gi~i~~~~~~~~~~~~~iRi~~~~~-~~~i~~~~~al~ 349 (350)
T cd00609 313 GVVVRPGSAFGEGGEGFVRLSFATP-EEELEEALERLA 349 (350)
T ss_pred CEEEecccccccCCCCeEEEEeeCC-HHHHHHHHHHhh
Confidence 99999988776 788999999985 899999888875
No 106
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-35 Score=260.70 Aligned_cols=322 Identities=21% Similarity=0.314 Sum_probs=265.5
Q ss_pred CCCCCCCCCcHHHHHHHHHHHH-hhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEE
Q 015768 61 ISKYGADEGLPELRDALVKKLN-QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTH 137 (400)
Q Consensus 61 ~~~y~~~~g~~~~~~~~a~~l~-~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~ 137 (400)
..+|+...|..++...+.++.. ..+.. +..++++|+|.|.+++.+++.++++||+|++..++|.+....++..|+.+
T Consensus 93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ 172 (472)
T KOG0634|consen 93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKI 172 (472)
T ss_pred hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceE
Confidence 5689999999999999998665 22322 24589999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCCCCCHHHHHHhhcc-------CCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 138 ILVGPCSSKTLHPDADWLEKTLET-------KPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 138 ~~~~~~~~~~~~~~~e~l~~~l~~-------~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
+.| +.|++| +++|.|++.+.. .+.|++++.. ..+||||..++.+..++|.++|++|++++|+||.|..+
T Consensus 173 ipv-~md~~G--i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L 249 (472)
T KOG0634|consen 173 IPV-KMDQDG--IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL 249 (472)
T ss_pred Eec-cccCCC--CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence 999 888886 589999998862 2335777655 56999999999999999999999999999999999988
Q ss_pred ccCC---C-----C-c--------------cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc
Q 015768 210 MYDG---R-----K-H--------------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI 266 (400)
Q Consensus 210 ~~~~---~-----~-~--------------~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~ 266 (400)
-++. . + + ..+..++++-+.||||.++ ||+|+||+.++ +.+++++-......+.
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~---~~~l~ril~~ae~~t~ 325 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGN---SLFLKRILDLAEVATS 325 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecC---HHHHHHHhhhcceeec
Confidence 7762 1 1 0 1122578999999999997 99999999999 7788888877777777
Q ss_pred CccHHHHHHHHHHhcC-Cc----HHHHHHHHHHHHHHHHHHHHhcc-CCC--CcccCCCCceEEEeeCC-------CCCC
Q 015768 267 CASIISQHLALYSLQT-GP----EWVTERVKDLVRNREIIREALSP-LGE--GAVKGGEGAIYLWARLP-------EKHL 331 (400)
Q Consensus 267 ~~~~~~~~~~~~~l~~-~~----~~~~~~~~~~~~~~~~l~~~L~~-~~~--~~~~~~~~~~~~~~~~~-------~~~~ 331 (400)
+++.+.|..+.+.|.. ++ +|+.+.+..+..+++.+..+|.+ ++. .++..|.+|+|+|++++ ....
T Consensus 326 ~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~ 405 (472)
T KOG0634|consen 326 GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSIN 405 (472)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchH
Confidence 7888888888777775 22 67888888888889998888887 444 46778899999999997 3332
Q ss_pred CHHHHHHHHHHhcCeEEeCCCccCC------C-CeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 332 DDFEVVRWLAHRHGVVVIPGGACGC------R-GHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 332 ~~~~~~~~l~~~~gi~v~~g~~~~~------~-~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+.++.....+.++||.+.+|..|.. . -++|++++..+.|+++++++++..++++....
T Consensus 406 q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~~ 470 (472)
T KOG0634|consen 406 QIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFIT 470 (472)
T ss_pred HHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 3556666667799999999999842 2 38999999888999999999999999987653
No 107
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=2.3e-33 Score=266.38 Aligned_cols=348 Identities=18% Similarity=0.183 Sum_probs=252.2
Q ss_pred HHHHHHHhc-CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEE
Q 015768 20 VQIQELVRG-AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKL-YKSSVM 93 (400)
Q Consensus 20 ~~~~~~~~~-~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~ 93 (400)
.++++.|-. .++.+.|+.+... +.|+.+++++.+++...... .+.......+..+.+.+.+++.+|+ ++++|+
T Consensus 7 ~~~r~~fp~l~~~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~ 85 (401)
T PRK10874 7 AQFRAQFPALQDAGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIV 85 (401)
T ss_pred HHHHHhCCCcCCceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 445555542 3458889888765 46788999998888643111 1111111233344444455555588 689999
Q ss_pred EeCChHHHHHHHHHHhc----CCCCEEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768 94 VTAGANQAFVNIVLTLC----DAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (400)
Q Consensus 94 ~~~g~t~a~~~~~~~l~----~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~ 165 (400)
+++|+|++++.++.++. ++||+|++++++|++. ....+..|++++.+ |.+.+ +.+|++.+++.+++++
T Consensus 86 ~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~~t-- 161 (401)
T PRK10874 86 WTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKL-PLGAD-RLPDVDLLPELITPRT-- 161 (401)
T ss_pred EECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEE-ecCCC-CcCCHHHHHHhcCcCc--
Confidence 99999999999999983 7899999999999763 34557789999999 87654 4679999999998766
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~ 245 (400)
++|++++++||||.++| +++|.++|+++|+++++|++|+.... +......+.++++.|++|.+|.+| +|+++
T Consensus 162 ~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~---~~~~~~~~~d~~~~s~~K~~gp~G--~G~l~ 233 (401)
T PRK10874 162 RILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF---PADVQALDIDFYAFSGHKLYGPTG--IGVLY 233 (401)
T ss_pred EEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc---cCCchhcCCCEEEEecccccCCCc--cEEEE
Confidence 99999999999999999 88999999999999999999974332 122223356788999999887555 59988
Q ss_pred ccCCcHHHHHHHHHhhc---------------------cCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHH
Q 015768 246 YPSEVEGFATQLLKVQD---------------------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 246 ~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~ 303 (400)
.+ +++++.+..... ....+++.+.+.++..+++... ....+..++..++++++.+
T Consensus 234 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~ 310 (401)
T PRK10874 234 GK---SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAED 310 (401)
T ss_pred Ec---hHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 88 677766543220 0112456666666666665311 1234556777788899999
Q ss_pred HhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHH
Q 015768 304 ALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKA 374 (400)
Q Consensus 304 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~ 374 (400)
.|++++++.+..+..+.++++.++. .+.+++...| .++||.+.+|..|. ..+++|+|++. +|++|++.
T Consensus 311 ~l~~~~g~~~~~~~~~~i~~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ 387 (401)
T PRK10874 311 ALAKLPGFRSFRCQDSSLLAFDFAG--VHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDA 387 (401)
T ss_pred HHhcCCCEEEeCCCCCcEEEEEECC--cCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHH
Confidence 9998866565544445566667654 3567788766 57999999988663 35899999998 99999999
Q ss_pred HHHHHHHHHHHH
Q 015768 375 AADRLRRGLEEL 386 (400)
Q Consensus 375 ~~~~l~~~l~~~ 386 (400)
+++.|+++++.+
T Consensus 388 ll~al~~~~~~~ 399 (401)
T PRK10874 388 LVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHh
Confidence 999999988754
No 108
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=2.6e-33 Score=265.73 Aligned_cols=342 Identities=18% Similarity=0.178 Sum_probs=247.8
Q ss_pred HHHHHhc-CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC-CCCCCC-------CcHHHHHHHHHHHHhhcCCC-CCc
Q 015768 22 IQELVRG-AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS-KYGADE-------GLPELRDALVKKLNQENKLY-KSS 91 (400)
Q Consensus 22 ~~~~~~~-~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~-------g~~~~~~~~a~~l~~~~~~~-~~~ 91 (400)
+++.|-. .++.+.|+.+... ++|+.+++++.+++...... .++... ..+++|+.+++++ |.+ +++
T Consensus 6 ~r~~fp~l~~~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~~~~~ 80 (398)
T TIGR03392 6 FRQQFPALQDGTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAPDAEN 80 (398)
T ss_pred HHHhCCccCCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCCCCCe
Confidence 4444542 3368889888765 46789999998887532111 111111 1233455555554 774 789
Q ss_pred EEEeCChHHHHHHHHHHh----cCCCCEEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768 92 VMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~ 163 (400)
|++|+|+|++++.++.++ .++||+|++++|+|++. ...++..|++++.+ |.+.+ +.+|++.+++.+.+++
T Consensus 81 i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~~~~~l~~~i~~~t 158 (398)
T TIGR03392 81 IVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKL-PIGAD-LLPDIRQLPELLTPRT 158 (398)
T ss_pred EEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCcCHHHHHHHhccCc
Confidence 999999999999999998 47899999999999773 34567889999999 88755 4679999999998766
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEE
Q 015768 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY 243 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~ 243 (400)
++|++++++||||.+.| +++|.++|+++|+++++|++|+.+.. +......+.+++++|++|.+|++| +||
T Consensus 159 --~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~---~~~~~~~~~d~~~~s~~K~~gp~G--~G~ 228 (398)
T TIGR03392 159 --RILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG---PPDVQALDIDFYAFSGHKLYGPTG--IGV 228 (398)
T ss_pred --eEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC---CCChhhcCCCEEEEecccccCCCc--eEE
Confidence 99999999999999999 88899999999999999999974432 122223456788899999887555 899
Q ss_pred EEccCCcHHHHHHHHHhhcc---------------------CCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHH
Q 015768 244 IAYPSEVEGFATQLLKVQDN---------------------IPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREII 301 (400)
Q Consensus 244 i~~~~~~~~~~~~l~~~~~~---------------------~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l 301 (400)
++.+ +++++.+...... ...+++.+...++..+++... ....+..++..++++++
T Consensus 229 l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l 305 (398)
T TIGR03392 229 LYGK---TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLA 305 (398)
T ss_pred EEEc---HHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9888 6776665432110 112455555566666555311 12346667788889999
Q ss_pred HHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHH
Q 015768 302 REALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDC 372 (400)
Q Consensus 302 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~ 372 (400)
.+.|++++++.+..+....++++.++. .+.+++...| .++||.+.+|..|. .++++|+|++. +|++|+
T Consensus 306 ~~~l~~l~g~~~~~~~~~~i~~~~~~~--~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 306 EERLAQLPGFRSFRCPGSSLLAFDFAG--VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred HHHHhcCCCeEEeCCCCCcEEEEEeCC--cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 999988866555543335566666653 3567888876 47899999998663 35799999998 999999
Q ss_pred HHHHHHHHHHHHHH
Q 015768 373 KAAADRLRRGLEEL 386 (400)
Q Consensus 373 ~~~~~~l~~~l~~~ 386 (400)
+.+++.|+++++.+
T Consensus 383 ~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 383 DALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988753
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=5.7e-33 Score=264.07 Aligned_cols=354 Identities=14% Similarity=0.082 Sum_probs=264.2
Q ss_pred chHHHHHHHHHhcCCCeEEcCCCCC--CCCCcH---HHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC
Q 015768 16 MPIMVQIQELVRGAKNAVSLAQGVV--YWQPPK---MAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS 90 (400)
Q Consensus 16 ~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~---~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~ 90 (400)
.....+...+.+.|.+.++|+.|++ ++.+|. .+.+++.+++..+ ...|++..|.++++++++++++ .+
T Consensus 22 ~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-~~~Y~~~~g~~~Lreaia~~~~------~~ 94 (460)
T PRK13238 22 TTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-DEAYAGSRSYYRLEDAVKDIFG------YP 94 (460)
T ss_pred cCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-CcccCCCCCHHHHHHHHHHHhC------CC
Confidence 3444555556678899999999998 676655 6788888887654 4579999999999999999983 46
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-------CCC--CCCHHHHHHhhcc
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-------KTL--HPDADWLEKTLET 161 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-------~~~--~~~~e~l~~~l~~ 161 (400)
++++|+|+++|+..++.++++||| |++++|.|..+...++..|++++.+ +.++ +++ ++|++.|++.+++
T Consensus 95 ~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v-~~~~~~~~~~~~~f~g~id~e~Le~~i~~ 172 (460)
T PRK13238 95 YTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDL-VIDEALDTGSRHPFKGNFDLEKLEALIEE 172 (460)
T ss_pred cEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEE-eccccccccccccccCCcCHHHHHHHHhh
Confidence 799999999999999999999999 9999999999998899999999999 8753 234 4999999999984
Q ss_pred C--CCCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccc--cccCC-----CCcccc-------CCCcE
Q 015768 162 K--PTPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEY--FMYDG-----RKHCCV-------EGDHV 224 (400)
Q Consensus 162 ~--~~~~~v~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~--~~~~~-----~~~~~~-------~~~~~ 224 (400)
. ..+++|++++|+||+| .+++.+++++|.++|++||+++|+|+++.. ..+.. ...... ..-.+
T Consensus 173 ~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D 252 (460)
T PRK13238 173 VGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYAD 252 (460)
T ss_pred cCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCc
Confidence 2 1358999999999997 999999999999999999999999997742 22211 111110 01234
Q ss_pred EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----ccCCcCc-cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----DNIPICA-SIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
++..|..|... .+ ..|++++++ ++++++++... ...+++. +...+.|++.+|++..+ +.+.+...++++
T Consensus 253 ~~~~Sg~K~g~-~~-~GG~i~~~d--~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~--~~~~~~~~~~~~ 326 (460)
T PRK13238 253 GLTMSAKKDAM-VN-IGGLLCFRD--EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD--EDYLAYRIGQVE 326 (460)
T ss_pred EEEEecccCCC-Cc-ceeEEEcCh--HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhC--hHHHHHHHHHHH
Confidence 55556666542 11 236777775 68888887663 2224444 44557777777764111 122223344578
Q ss_pred HHHHHhccCCCCcccCCCCceEEEeeCCCC-------CCCHHHHHHHHHHhcCeEEeCCCccCC-------------CCe
Q 015768 300 IIREALSPLGEGAVKGGEGAIYLWARLPEK-------HLDDFEVVRWLAHRHGVVVIPGGACGC-------------RGH 359 (400)
Q Consensus 300 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------~~~ 359 (400)
+|.+.|++.|. .+..|.+++++++++... ...+.+++.+|+++.||.+.|++.|.. ...
T Consensus 327 ~l~~~L~~~G~-~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~ 405 (460)
T PRK13238 327 YLGEGLEEAGV-PIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAEL 405 (460)
T ss_pred HHHHHHHHCCC-CeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccce
Confidence 89999988765 777889899999987542 113578999999999999999887731 368
Q ss_pred EEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768 360 LRISFGG--LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 360 iRi~~~~--~~~~~~~~~~~~l~~~l~~ 385 (400)
+|++++. -+.+.++.+.++|++..+.
T Consensus 406 ~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 406 LRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred EEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 9999986 5888888888888887643
No 110
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=3.2e-33 Score=268.16 Aligned_cols=338 Identities=15% Similarity=0.163 Sum_probs=255.6
Q ss_pred cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768 28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (400)
Q Consensus 28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~ 100 (400)
+|+++++|++++ +++..++++.+++.+++++... +.|++.....++++++++++ + .++.+++++|++
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~----~-~~~~i~~s~G~~- 180 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL----G-TPDSILYSYGLS- 180 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh----C-CCCEEEECCHHH-
Confidence 578899999885 6777899999999999987322 13445555677777777776 4 346788887766
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc---c----CCC-CeEEEEeC
Q 015768 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---T----KPT-PKLVSVVN 172 (400)
Q Consensus 101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~---~----~~~-~~~v~l~~ 172 (400)
++..++.+++++||.|++....|.++...++..|.+++.+ +.+ |.++++..++ . .+. .++|+++.
T Consensus 181 a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~-~~n------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~ 253 (481)
T PLN02822 181 TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYF-KHN------DMESLRNTLEKLTAENKRKKKLRRYIVVEA 253 (481)
T ss_pred HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEE-CCC------CHHHHHHHHHHHhhhhcccCCCcEEEEEec
Confidence 6899999999999999999888888888888889999888 654 3344444432 1 112 26888888
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----cccc-CCCcEEEEeccccccCCCcceeEEEEc
Q 015768 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAY 246 (400)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~ 246 (400)
+++++|.+.| +++|.++|++||+++|+||+|+.+.++... +... ....+++++|+||++|+.| ||+++
T Consensus 254 i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g 327 (481)
T PLN02822 254 IYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTG 327 (481)
T ss_pred CCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEc
Confidence 8999999999 899999999999999999999976665321 1111 1356799999999998777 99999
Q ss_pred cCCcHHHHHHHHHhhccCCcCcc--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEe
Q 015768 247 PSEVEGFATQLLKVQDNIPICAS--IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA 324 (400)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 324 (400)
+ +++++.+.......+++.+ +..+.++..+|+..++ ..++.++++++++++++.|++..++.+..+.+++++++
T Consensus 328 ~---~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l 403 (481)
T PLN02822 328 S---ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFL 403 (481)
T ss_pred C---HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEE
Confidence 8 7888887765555556544 6677777778864222 25778899999999999999875556666666888888
Q ss_pred eCCCCC----CC---HHHHHHHHHHhcCeEEeCCCc--cC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 325 RLPEKH----LD---DFEVVRWLAHRHGVVVIPGGA--CG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 325 ~~~~~~----~~---~~~~~~~l~~~~gi~v~~g~~--~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.++... .+ ..+++.+|++++||.+.++.+ +. .+.++|++++. ++++++++++++|++++.++..
T Consensus 404 ~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 404 HLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred EeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 886421 01 357888888788999997643 32 24689999886 7999999999999999988754
No 111
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=3.3e-32 Score=258.07 Aligned_cols=332 Identities=17% Similarity=0.134 Sum_probs=242.6
Q ss_pred hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCCCCC---Cc----HHHHHHHHHHHHhhcCCCCCcEEEeCCh
Q 015768 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYGADE---GL----PELRDALVKKLNQENKLYKSSVMVTAGA 98 (400)
Q Consensus 27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~----~~~~~~~a~~l~~~~~~~~~~i~~~~g~ 98 (400)
++|+++|+|++++ ++++++|++++++.+++.+.. ..|+.+. |. .++++++++++ |. +++++++|+
T Consensus 35 ~~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~----g~--~~~ii~~~~ 107 (393)
T TIGR01822 35 ADGREVLNFCANNYLGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFL----GT--EDTILYASC 107 (393)
T ss_pred cCCceEEEeeCCCccccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHh----CC--CcEEEECch
Confidence 4778999999998 578889999999999887632 2444444 65 55666666665 53 567777899
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCC
Q 015768 99 NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPG 174 (400)
Q Consensus 99 t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~ 174 (400)
++|+..++.++.++||.|+++.|+|+++...++..+.+.+.+ + ..|++++++.+++ ++.+++|++.+++
T Consensus 108 ~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~-~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~ 180 (393)
T TIGR01822 108 FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-A------NNDMADLEAQLKEARAAGARHRLIATDGVF 180 (393)
T ss_pred HHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEe-C------CCCHHHHHHHHHhhhhcCCCceEEEEeCCc
Confidence 999999999999999999999999999998888888776555 3 2588899988873 1234788888899
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--C---ccccCCCcEEEEeccccccCCCcceeEEEEccCC
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--K---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~---~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~ 249 (400)
||+|.+.+ +++|.++|++||+++|+|++|+....+.. . ......+.+++++|+||+++ |+|+||++++
T Consensus 181 ~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~--g~r~G~~~~~-- 253 (393)
T TIGR01822 181 SMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG--GASGGFTTAR-- 253 (393)
T ss_pred cCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh--CCCcEEEEeC--
Confidence 99999999 89999999999999999999964333211 1 11112356799999999985 6789999988
Q ss_pred cHHHHHHHHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC
Q 015768 250 VEGFATQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 327 (400)
Q Consensus 250 ~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 327 (400)
+++++.+....... ..+.++..+.++..+++.. +..+++.++++++++++.+.|++.+. .+..+. +.++.+.++
T Consensus 254 -~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~i~~~ 329 (393)
T TIGR01822 254 -KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML-EASNELRDRLWANTRYFRERMEAAGF-DIKPAD-HPIIPVMLY 329 (393)
T ss_pred -HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeC
Confidence 78888776643222 2233455555556666531 22456778889999999999987654 444444 344555544
Q ss_pred CCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 328 EKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.. .+..+++.+|+ ++||.+. +..|. ....+|++++. ++++|+++++++|.++++++
T Consensus 330 ~~-~~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 330 DA-VLAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred CH-HHHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 32 14577888886 6799997 43332 23469999887 79999999999999987653
No 112
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=2.2e-32 Score=259.81 Aligned_cols=338 Identities=18% Similarity=0.115 Sum_probs=247.5
Q ss_pred hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
++|+++++|+.++ +++++++.+++++.+.+.+... ..+....|..++++++++++++.+|.+ +++++++| ++++.
T Consensus 39 ~~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~ 116 (397)
T PRK06939 39 ADGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANG 116 (397)
T ss_pred cCCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHH
Confidence 5788999999987 6888899999999998865321 222234678889999999999888864 67777776 78999
Q ss_pred HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCcc
Q 015768 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGT 179 (400)
Q Consensus 104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~ 179 (400)
.++.++.+|||.|++++|+|+++...++..|.+++.+ +. .|++++++.++. .+.+++|++.+.+|++|.
T Consensus 117 ~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~ 189 (397)
T PRK06939 117 GLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGD 189 (397)
T ss_pred HHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEe-CC------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCC
Confidence 9999999999999999999999998899899988777 53 377888887753 223477776677899999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCC---ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~---~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
..+ +++|.++|++||+++|+||+|..+..+ +.. ......+.+++++|+||+++ |+|+||++.+ ++++
T Consensus 190 ~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~---~~~~ 261 (397)
T PRK06939 190 IAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGR---KEVI 261 (397)
T ss_pred cCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeC---HHHH
Confidence 877 999999999999999999999633222 111 11122346799999999994 5589999988 7888
Q ss_pred HHHHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC
Q 015768 255 TQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 332 (400)
Q Consensus 255 ~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (400)
+.+....... ..+.++..+.++..+++.. +...++++++.++++.+.+.|++++. .+..+.++++ ++.++.. .+
T Consensus 262 ~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~-~~~~~~~-~~ 337 (397)
T PRK06939 262 DWLRQRSRPYLFSNSLAPAIVAASIKVLELL-EESDELRDRLWENARYFREGMTAAGF-TLGPGEHPII-PVMLGDA-KL 337 (397)
T ss_pred HHHHHhCccccccCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CcCCCCCCEE-EEEECCH-HH
Confidence 8877543221 2222344445555555431 11246778888999999999988764 4444554443 3444432 24
Q ss_pred HHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
..+++.+|+ ++||.+.++.+.. ..+++|++++. ++++++++++++|.++++++
T Consensus 338 ~~~~~~~L~-~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 338 AQEFADRLL-EEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HHHHHHHHH-HCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 577888887 5699998654321 24689999976 79999999999999988764
No 113
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=2.4e-31 Score=245.02 Aligned_cols=307 Identities=16% Similarity=0.127 Sum_probs=232.8
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768 40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (400)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~ 119 (400)
..+..+|.+.++..+.+.+. + |..++.+++.+.+++.+|.+++++++++|+++++..++.++.+|||+|+++
T Consensus 30 lgl~~~~~~~~~~~~~~~~~-----~---g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~ 101 (346)
T TIGR03576 30 TGLAGGFKIDEEDLELLETY-----V---GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHY 101 (346)
T ss_pred ccCCCChhHHHHHHHHHHHh-----c---CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEEC
Confidence 44567899999988887663 1 345677777777777779989999999999999999999999999999975
Q ss_pred ---CCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 120 ---APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 120 ---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
.|+|..+...++..|++++.+ .+++.++. . ++ .++|+++ +++++|.+++.+++++|+++|+++
T Consensus 102 ~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-~~--~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~ 167 (346)
T TIGR03576 102 LPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-DG--TSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK 167 (346)
T ss_pred CCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-cC--ceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc
Confidence 478888888899999876432 14455432 1 33 3788776 468999999999999999999999
Q ss_pred CCEEEEcccccccccC--CCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHH
Q 015768 197 GSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH 274 (400)
Q Consensus 197 ~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 274 (400)
|+++++||+|+.+..+ +... ....+.+++++|+||+ ++|+|+||++++ +++++.+........++.+++.+.
T Consensus 168 ~~~livDEAy~~~~~~~~~~~~-~~~~~~divv~s~SKa--laG~r~G~v~~~---~~li~~l~~~~~~~~~s~~~~~~~ 241 (346)
T TIGR03576 168 EAIVLVDDASGARVRRLYGQPP-ALDLGADLVVTSTDKL--MDGPRGGLLAGR---KELVDKIKSVGEQFGLEAQAPLLA 241 (346)
T ss_pred CCEEEEECCccccccccCCCCC-HHHcCCcEEEeccchh--ccccceEEEEeC---HHHHHHHHHhhcCcccCccHHHHH
Confidence 9999999999976532 1111 1112345788899995 478999999999 889999998877666777888999
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc
Q 015768 275 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC 354 (400)
Q Consensus 275 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~ 354 (400)
++..+|+... .+.+++.++++++.+.+.++++ .+..+. ++|+|++++.. +..+++.++++++||.++|+..|
T Consensus 242 aa~~aL~~~~--~~~~~~~l~~r~~~~~~~l~~~---~~~~~~-~~f~~~~~~~~--~~~~~~~~ll~~~gV~v~~~~~f 313 (346)
T TIGR03576 242 AVVRALEEFE--LSRIRDAFKRKEEVYLRLFDKL---NVERTP-TGFVIKGVEEE--KLIEIGLDLLRNYGIITITAVGM 313 (346)
T ss_pred HHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHhC---CCCcCC-CeEEEEeCCCC--CHHHHHHHHHHhCCEEEeCCccc
Confidence 9999997522 2455677777777777777743 333333 55899998742 34567778888999999999877
Q ss_pred C-CCCeEEEEeccCCHH---HHHHHHHHHHHHH
Q 015768 355 G-CRGHLRISFGGLVED---DCKAAADRLRRGL 383 (400)
Q Consensus 355 ~-~~~~iRi~~~~~~~~---~~~~~~~~l~~~l 383 (400)
. .++|+||+++. +++ +.+.+++.|++.+
T Consensus 314 ~~~~~~vRis~~~-~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 314 PGASKTLRFDLAA-KDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred CCCCCeEEEEEec-ChHHhcCHHHHHHHHHhcc
Confidence 4 47899999996 443 5777777776543
No 114
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=9.7e-32 Score=252.11 Aligned_cols=331 Identities=16% Similarity=0.176 Sum_probs=237.2
Q ss_pred hcCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+++++|+.+++ +++.++++++++.+++.+... ..|....|.....+.+++.+++.++. ++.+++++| ++++.
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G-~~~~~ 90 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSG-YLANV 90 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECch-HHHHH
Confidence 46889999999853 234679999999988865221 12222233334344444444444453 466777666 56666
Q ss_pred HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCCccCC
Q 015768 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~nptG~~~ 181 (400)
.++.++.++||+|+++.|+|+.+...++..|.+++.+ +. +|++.+++.++.. ...+++++.+++|++|...
T Consensus 91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~ 163 (360)
T TIGR00858 91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRY-RH------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA 163 (360)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEe-cC------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc
Confidence 6788888999999999999999999999999998877 53 4788899888743 1247888888999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Cc---ccc-CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KH---CCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~---~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
+ +++|.++|+++|+++|+||+|+.+.++.. .. ... ..+++++++|+||++|++| ||++.+ +++.+
T Consensus 164 ~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~---~~~~~ 234 (360)
T TIGR00858 164 P---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS---QALID 234 (360)
T ss_pred C---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC---HHHHH
Confidence 9 89999999999999999999986654322 11 111 2367899999999998655 999988 77877
Q ss_pred HHHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768 256 QLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333 (400)
Q Consensus 256 ~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (400)
.+....... +.+.++..+.++..+++.. ...+++.+++.++++++.+.|++++. .+..+ .++++|+.++.. .+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~~~~~~~~~~~~-~~~ 310 (360)
T TIGR00858 235 YLINRARTLIFSTALPPAVAAAALAALELI-QEEPWRREKLLALIARLRAGLEALGF-TLMPS-CTPIVPVIIGDN-ASA 310 (360)
T ss_pred HHHHhCccceecCCCCHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHcCC-ccCCC-CCCEEEEEeCCH-HHH
Confidence 775443222 2334555555666666531 22356778899999999999998764 55544 477888888642 246
Q ss_pred HHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLR 380 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~ 380 (400)
.++..+|. ++||.+.++..+. .++++|++++. +++++++.++++|+
T Consensus 311 ~~~~~~l~-~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 311 LALAEELQ-QQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHHH-HCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 67888876 7899998865543 34689999997 79999999998763
No 115
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=2.5e-31 Score=251.46 Aligned_cols=336 Identities=18% Similarity=0.152 Sum_probs=249.1
Q ss_pred hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+++++|+.++ +++++++.+++++.+.+.+.. ...|....|..++++++++++++.+|. ++.+++++| ++++.
T Consensus 30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG-~~a~~ 107 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSG-FNTNQ 107 (385)
T ss_pred ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcH-HHHHH
Confidence 5578999999886 677789999999988886532 345767788999999999999998885 355666666 67788
Q ss_pred HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCCccCC
Q 015768 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~nptG~~~ 181 (400)
.++.++.++||.|+++.|+|+++...+...|+++..+ + .+|++++++.+... ...++|++.+++||+|.+.
T Consensus 108 ~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~-~------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~ 180 (385)
T TIGR01825 108 GVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIY-K------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA 180 (385)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEe-C------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc
Confidence 8999999999999999999999888888888887666 3 35788888877632 1247888778899999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
+ +++|.++|++||+++|+||+|+.+.++... ......+.+++++|+||++|++| ||++.+ +++++.
T Consensus 181 ~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~---~~~~~~ 251 (385)
T TIGR01825 181 P---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGH---KELIEY 251 (385)
T ss_pred C---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecC---HHHHHH
Confidence 9 899999999999999999999876543211 11223567899999999997655 999888 788888
Q ss_pred HHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768 257 LLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 257 l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (400)
+....... +...+++.+.++.++++...++ .+..+++.++++++.+.|++++. .+..+. +.++.+.++.. .+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~~-~~~~ 327 (385)
T TIGR01825 252 LKNRARPFLFSTAQPPAVVAALAAAVDELQRS-PELMERLWDNTRFFKAGLGKLGY-DTGGSE-TPITPVVIGDE-KAAQ 327 (385)
T ss_pred HHHhCccccccCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEECCH-HHHH
Confidence 76543211 2234566677777777642221 24566677888999999988754 555555 34555454421 1356
Q ss_pred HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
+++..|+ ++||.+.++.... +..++|++++. ++++++++++++|++++++
T Consensus 328 ~~~~~L~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 328 EFSRRLF-DEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred HHHHHHH-HCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 7888887 5699985433222 23689999875 8999999999999998865
No 116
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1.5e-31 Score=254.37 Aligned_cols=335 Identities=20% Similarity=0.193 Sum_probs=242.1
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC----CCCCC----CCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGAD----EGLPELRDALVKKLNQENKLY-KSSVMVTAGAN 99 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~----~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t 99 (400)
+++.+.|+.+... ++|+.+++++.+.+...... .+... ...+++|+.+++++ |.+ +++|++++|+|
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~~~~~~~v~~~~g~t 90 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----NAASDEEIVFTRGTT 90 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CcCCCCeEEEeCCHH
Confidence 4578999998766 46788999988877542111 11001 12234445555544 777 68999999999
Q ss_pred HHHHHHHHHh----cCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe
Q 015768 100 QAFVNIVLTL----CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (400)
Q Consensus 100 ~a~~~~~~~l----~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~ 171 (400)
++++.++.++ .++||+|+++++.|++.. ...+..|++++.+ +.++++ .++++.+++.+.+++ ++++++
T Consensus 91 ~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v-~~~~~~-~~~~~~l~~~i~~~~--~lv~~~ 166 (403)
T TIGR01979 91 ESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI-PLDDDG-TLDLDDLEKLLTEKT--KLVAIT 166 (403)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE-ecCCCC-CCCHHHHHHHhccCC--eEEEEE
Confidence 9999999875 578999999999987744 4455789999999 877554 679999999998765 999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 251 (400)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~ 251 (400)
+++||||.+.| +++|.++|++||+++++|++|+.+.. +......+.+++++|++|.+|++| +|+++.+ +
T Consensus 167 ~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~---~~~~~~~~~d~~~~s~~K~~gp~G--~g~l~~~---~ 235 (403)
T TIGR01979 167 HVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHM---PVDVQALDCDFYVFSGHKMYGPTG--IGVLYGK---E 235 (403)
T ss_pred cccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCcc---ccCccccCCCEEEEecccccCCCC--ceEEEEc---h
Confidence 99999999999 88999999999999999999974322 222223457799999999887555 7998887 5
Q ss_pred HHHHHHHHhhc---------------------cCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCC
Q 015768 252 GFATQLLKVQD---------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLG 309 (400)
Q Consensus 252 ~~~~~l~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 309 (400)
++++.+..... ....+++.....++..+++...+ ..++..++..++++.+.+.|++++
T Consensus 236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 315 (403)
T TIGR01979 236 ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIP 315 (403)
T ss_pred HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 66665432110 01124555666666666653111 245677888888999999998886
Q ss_pred CCcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------CCCCeEEEEecc-CCHHHHHHHH
Q 015768 310 EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAA 376 (400)
Q Consensus 310 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~ 376 (400)
++++..+. .+.++.+.++. .+..++...| +++||.+.+|..| +.++++|||++. ++++|++.++
T Consensus 316 g~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~ 392 (403)
T TIGR01979 316 GLRIYGPRDAEDRGGIISFNVEG--VHPHDVGTIL-DEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALV 392 (403)
T ss_pred CEEEeCCCCccccCceEEEEeCC--cCHHHHHHHH-hhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHH
Confidence 66666543 14455566653 2466777655 5899999987643 346799999997 8999999999
Q ss_pred HHHHHHHHHH
Q 015768 377 DRLRRGLEEL 386 (400)
Q Consensus 377 ~~l~~~l~~~ 386 (400)
+.|+++++.+
T Consensus 393 ~~l~~~~~~~ 402 (403)
T TIGR01979 393 EALKKVRKFF 402 (403)
T ss_pred HHHHHHHHHh
Confidence 9999877654
No 117
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=2.2e-31 Score=253.04 Aligned_cols=336 Identities=14% Similarity=0.111 Sum_probs=242.5
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVN 104 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~~~ 104 (400)
.+++.|+.+... +.|+.|++++.+++...... .+.......+..+.+.+.+++.+|. ++++|++|+|+|++++.
T Consensus 22 ~~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~ 100 (406)
T PRK09295 22 LPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINL 100 (406)
T ss_pred CceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 367888887644 36788999998888642111 1111111223333444445555576 57899999999999999
Q ss_pred HHHHh----cCCCCEEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 105 IVLTL----CDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 105 ~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
++.++ .++||+|++++++|++. ....+..|++++.+ +.++++ .+|++++++.+++++ ++|++++++||
T Consensus 101 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~~-~~d~~~l~~~i~~~t--~lv~l~~~~n~ 176 (406)
T PRK09295 101 VANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVI-PLNPDG-TLQLETLPALFDERT--RLLAITHVSNV 176 (406)
T ss_pred HHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEE-ecCCCC-CCCHHHHHHhcCCCc--EEEEEecchhc
Confidence 99874 57899999999998764 34456789999999 877554 679999999998765 99999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
||.++| +++|.++|+++|+++++|++|+.+. .+......+.++++.|++|.+|++| +||++.+ +++.+.
T Consensus 177 tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~---~~~~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~---~~~~~~ 245 (406)
T PRK09295 177 LGTENP---LAEMIALAHQHGAKVLVDGAQAVMH---HPVDVQALDCDFYVFSGHKLYGPTG--IGILYVK---EALLQE 245 (406)
T ss_pred ccccCC---HHHHHHHHHHcCCEEEEEcccccCc---cccCchhcCCCEEEeehhhccCCCC--cEEEEEc---hHhHhh
Confidence 999999 8889999999999999999997543 2222233466799999999887555 7999888 566554
Q ss_pred HHHhh----------------------ccCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768 257 LLKVQ----------------------DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAV 313 (400)
Q Consensus 257 l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 313 (400)
+.... .....+++.....++..+++...+ ..+...++.+++.+++++.|++++++++
T Consensus 246 ~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~ 325 (406)
T PRK09295 246 MPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_pred CCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 43110 011235677777777777764222 2456677888889999999988876566
Q ss_pred cCCC-CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 314 KGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 314 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
..+. ....+.+.++. .+.+++...| +++||.++.|..|. .++.+|+|++. +|++|++.+++.|++..
T Consensus 326 ~~~~~~~~iv~~~~~~--~~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~ 402 (406)
T PRK09295 326 YGPQNRLGVIAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIH 402 (406)
T ss_pred eCCCCCceEEEEEECC--cCHHHHHHHH-HhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 5542 13344555654 2567777766 68999999988663 24689999998 99999999999998864
Q ss_pred H
Q 015768 384 E 384 (400)
Q Consensus 384 ~ 384 (400)
+
T Consensus 403 ~ 403 (406)
T PRK09295 403 R 403 (406)
T ss_pred H
Confidence 3
No 118
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=2.1e-31 Score=254.37 Aligned_cols=336 Identities=16% Similarity=0.132 Sum_probs=243.6
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC----CCCCCC----CcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS----KYGADE----GLPELRDALVKKLNQENKLY-KSSVMVTAGANQ 100 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~~~----g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~ 100 (400)
++.+.|+.+... ++|+.|++++.+.+.+.... .+.... ..+++|+.+++++ |.+ +++|++|+|+|+
T Consensus 31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t~ 105 (424)
T PLN02855 31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NASTSREIVFTRNATE 105 (424)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCCCCCEEEEeCCHHH
Confidence 468999997765 56788999998877542111 110111 1234455555544 775 589999999999
Q ss_pred HHHHHHHHh----cCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768 101 AFVNIVLTL----CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 101 a~~~~~~~l----~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~ 172 (400)
+++.++.++ .++||+|+++.++|++.. ...+..|++++.+ +.+.++ .++++.+++.+++++ ++|++++
T Consensus 106 al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v-~~~~~~-~~~~~~l~~~i~~~t--~lv~i~~ 181 (424)
T PLN02855 106 AINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFV-GLTPDE-VLDVEQLKELLSEKT--KLVATHH 181 (424)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEE-ecCCCC-CcCHHHHHHHhccCc--eEEEEeC
Confidence 999999874 578999999999987643 3456779999999 876554 479999999998755 9999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252 (400)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~ 252 (400)
++||||.++| +++|.++|+++|+++++|++|+.. ..+......+.+++++|++|.+|.+| +|+++.+ ++
T Consensus 182 ~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~g---~~~~~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~---~~ 250 (424)
T PLN02855 182 VSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSVP---HMPVDVQTLGADFLVASSHKMCGPTG--IGFLWGK---SD 250 (424)
T ss_pred ccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcC---CcCCCchhcCCCEEEeecccccCCCc--cEEEEEc---hh
Confidence 9999999999 888999999999999999999632 22222233456788999999776444 7999988 56
Q ss_pred HHHHHHHhh---------------------ccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768 253 FATQLLKVQ---------------------DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGE 310 (400)
Q Consensus 253 ~~~~l~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (400)
+++++.... .....+++.....++..+++... ...++..++..++++++++.|+++++
T Consensus 251 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g 330 (424)
T PLN02855 251 LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPG 330 (424)
T ss_pred hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 665553221 01122455566666666665311 23567778888889999999988866
Q ss_pred CcccCCC------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHHH
Q 015768 311 GAVKGGE------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAA 375 (400)
Q Consensus 311 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~ 375 (400)
+++..+. .+.++.+.++. .+.+++...|.+++||.+..|..|. .++++|+|++. +|++|++.+
T Consensus 331 ~~i~~~~~~~~~~r~~~v~~~~~~--~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l 408 (424)
T PLN02855 331 VRIYGPKPSEGVGRAALCAFNVEG--IHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAF 408 (424)
T ss_pred EEEeCCCcccccCcccEEEEEECC--cCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHH
Confidence 5665432 13566677764 2567888887644599999887652 35789999998 999999999
Q ss_pred HHHHHHHHHHHh
Q 015768 376 ADRLRRGLEELV 387 (400)
Q Consensus 376 ~~~l~~~l~~~~ 387 (400)
++.|++++..+.
T Consensus 409 ~~~l~~~~~~~~ 420 (424)
T PLN02855 409 IHALKDTIAFFS 420 (424)
T ss_pred HHHHHHHHHHHH
Confidence 999999998754
No 119
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=6e-31 Score=248.97 Aligned_cols=333 Identities=16% Similarity=0.126 Sum_probs=240.6
Q ss_pred cCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+|+++|+|+.+.+ ++.++|++++++.+++.+.. ...|....+...+.+.+++.+.+.++. + +.++++++++++..
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~-~~i~~~~g~~~~~~ 114 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-E-RALLFSSGYAANLA 114 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-C-cEEEECcHHHHHHH
Confidence 7899999999864 45578999999999886521 112323334555666666666666663 3 44555566677777
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCH
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPE 183 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~ 183 (400)
++..+.++||.|+++.|+|+.+...++..|++++.+ +. .|++.+++.++.. ...+++++.+++|++|...+
T Consensus 115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~- 186 (385)
T PRK05958 115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRY-PH------NDVDALEALLAKWRAGRALIVTESVFSMDGDLAP- 186 (385)
T ss_pred HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEe-CC------CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC-
Confidence 888889999999999999999998888889988887 54 2788999988743 12356666678999999988
Q ss_pred HHHHHHHHHHHHcCCEEEEcccccccccC--CCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
+++|.++|++||+++|+||+|+.+.++ +.... ....+.++++.|+||++|.+| ||++.+ +++.+.+
T Consensus 187 --l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~---~~~~~~~ 258 (385)
T PRK05958 187 --LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS---ETLIDYL 258 (385)
T ss_pred --HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC---HHHHHHH
Confidence 899999999999999999999765443 21111 112456788999999998655 898888 7777776
Q ss_pred HHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768 258 LKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 335 (400)
Q Consensus 258 ~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (400)
...... .+.+.++....++..+++...+. .+..+++.++++++.+.|++++. .+..+. +.++++.++.. .+..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~~~~~~~-~~~~~ 334 (385)
T PRK05958 259 INRARPFIFTTALPPAQAAAARAALRILRRE-PERRERLAALIARLRAGLRALGF-QLMDSQ-SAIQPLIVGDN-ERALA 334 (385)
T ss_pred HHhCccceecCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH-HHHHH
Confidence 543221 22345556666666677642222 46678888899999999988764 555555 66778887642 24567
Q ss_pred HHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 336 VVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+..+|. ++||.+.++..+. +++++|++++. ++++++++++++|++++
T Consensus 335 ~~~~l~-~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 335 LAAALQ-EQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHH-HCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 888885 7899998754332 34689999986 79999999999998753
No 120
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=4.5e-31 Score=246.99 Aligned_cols=320 Identities=19% Similarity=0.159 Sum_probs=234.5
Q ss_pred CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Q 015768 42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120 (400)
Q Consensus 42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~ 120 (400)
.+.|+.+++++.+.+.. + ......++.+++.+.+++.+|+++ +.+++++|+|+++..++.++.++||+|++..
T Consensus 8 ~~~~~~v~~a~~~~~~~-----~-~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~ 81 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG-----H-RSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGV 81 (356)
T ss_pred cCCCHHHHHHhCCCccC-----C-CCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEec
Confidence 34578888888654322 1 112345556677777777778854 4578899999999999999999999999999
Q ss_pred CCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 121 PYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 121 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
++|++ +...++..|++++.+ |.+++ +.+|++++++.+++ + +++|++++++||+|.+.| +++|.++|+++|
T Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~~~~l~~~i~~~~--~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~~ 154 (356)
T cd06451 82 NGVFGDRWADMAERYGADVDVV-EKPWG-EAVSPEEIAEALEQHD--IKAVTLTHNETSTGVLNP---LEGIGALAKKHD 154 (356)
T ss_pred CCchhHHHHHHHHHhCCCeEEe-ecCCC-CCCCHHHHHHHHhccC--CCEEEEeccCCCcccccC---HHHHHHHHHhcC
Confidence 98876 456778899999999 87754 46899999999975 4 499999999999999999 888899999999
Q ss_pred CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH----hhc-----------
Q 015768 198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK----VQD----------- 262 (400)
Q Consensus 198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~----~~~----------- 262 (400)
+++++|++++.. ..+......+.++++.|++|+++. +.++||++.+ +++++.+.. ...
T Consensus 155 ~~li~D~~~~~g---~~~~~~~~~~~d~~~~s~~K~l~~-p~g~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (356)
T cd06451 155 ALLIVDAVSSLG---GEPFRMDEWGVDVAYTGSQKALGA-PPGLGPIAFS---ERALERIKKKTKPKGFYFDLLLLLKYW 227 (356)
T ss_pred CEEEEeeehhcc---CccccccccCccEEEecCchhccC-CCCcceeEEC---HHHHHHHHhcCCCCceeecHHHHHhhh
Confidence 999999998732 222222233456778899999973 3468999998 677766653 000
Q ss_pred ----cCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEEEeeCCCCCCCHH
Q 015768 263 ----NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 263 ----~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 334 (400)
....+++...+.++..+++.. ....+...++..++++++.+.|++.+. .+..+ ..+.++++.++.. .+..
T Consensus 228 ~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~-~~~~ 305 (356)
T cd06451 228 GEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGL-KLLAKPELRSPTVTAVLVPEG-VDGD 305 (356)
T ss_pred cccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCcccCCCceEEEECCCC-CCHH
Confidence 122234555555555555431 133566778888889999999988754 44322 2345567777643 3678
Q ss_pred HHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+++..|.+++||.+.+|..+..++++|++++. ++++|++++++.|++++
T Consensus 306 ~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 306 EVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred HHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 88888864449999998766566899999987 78999999999998875
No 121
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-32 Score=223.07 Aligned_cols=331 Identities=24% Similarity=0.342 Sum_probs=263.4
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
+-|++.+.++..+++..++|+-++ +. ..| +......++.++++- -+++++++.+.-|+-+.+..++
T Consensus 38 a~G~~iv~ld~~e~~ryPdP~q~e-----fk----~~~-~d~rnk~ls~a~~~d----kpLt~dnic~GvGsDE~ID~ii 103 (375)
T KOG0633|consen 38 ALGRDIVKLDANENPRYPDPEQME-----FK----YVY-PDPRNKRLSDALAQD----KPLTSDNICVGVGSDELIDLII 103 (375)
T ss_pred hcCCCceEeccccCCCCcCHHHcc-----cc----ccc-CCcccchhhhhcccC----CCCCccceEEecCcHHHHHHHH
Confidence 446788999998877766666533 11 113 223344444454443 3678999999999999999999
Q ss_pred HHhcCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 107 LTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 107 ~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
++.+.|| ++|+...|+|..+.-.+...+++++.+ |..++ ++++.|.+.+.++.+..+|++++++|+||||..+..+.
T Consensus 104 R~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkv-pl~pd-F~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~d 181 (375)
T KOG0633|consen 104 RCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKV-PLNPD-FSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDD 181 (375)
T ss_pred hheecCCccceeecCCcceeEEEEeecCCceEEEe-cCCCC-ccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHH
Confidence 9999999 999999999988887788889999999 98875 78999999999986656899999999999999999888
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCC-ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~ 264 (400)
+.+|.+--. |.++++||+|.+|...++. .+...+++.+++.++||.||++|+|+||-..+ .++++-+.....
T Consensus 182 i~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~---~~ia~iln~~Ka-- 254 (375)
T KOG0633|consen 182 ILKILEMPD--NGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP---LSIAEILNRAKA-- 254 (375)
T ss_pred HHHHHhCCC--CcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeeccccc---HHHHHHHHhccC--
Confidence 888886322 7999999999998864433 23446889999999999999999999999999 889998888775
Q ss_pred CcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCC-cccCCCCceEEEeeCCCCC-CCHHHHHHHHH
Q 015768 265 PICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEG-AVKGGEGAIYLWARLPEKH-LDDFEVVRWLA 341 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 341 (400)
+++.+.+...++.+++... .+.+...++.+.+.+.++...|.++++. .+.++-.++|+.+++.... .-+..++.+++
T Consensus 255 PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~a 334 (375)
T KOG0633|consen 255 PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDA 334 (375)
T ss_pred CccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHH
Confidence 8888888888888899852 3667888899999999999999998773 4555656899999987532 12456777777
Q ss_pred HhcCeEEe-CCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 342 HRHGVVVI-PGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 342 ~~~gi~v~-~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
.+.||.++ .|+-.++.+++|++.+. +|+-.-+++.++++
T Consensus 335 t~~gVvVRfrgse~~c~G~lRitvGt--~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 335 TKMGVVVRFRGSEEGCKGYLRITVGT--PEENTVLMKCLKQF 374 (375)
T ss_pred HhcceEEEEcCCccccceeEEEEcCC--cccchHHHHHHHhh
Confidence 88999996 55555678999999985 56666677777664
No 122
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-30 Score=242.53 Aligned_cols=338 Identities=19% Similarity=0.145 Sum_probs=257.9
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFV 103 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~ 103 (400)
+++++.|+.+.... .|..|++++.++..... .+.|..........++..+.+++..|.++ ++|+||+|+|++++
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln 98 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN 98 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence 56888998876555 68999999998774321 22232233223344455555555558884 99999999999999
Q ss_pred HHHHHh---cCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 104 NIVLTL---CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 104 ~~~~~l---~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
.+..++ .++||+|+++.-.|++.. ...+..|++++.+ |.+++| .++.|.++..+++++ |+|.+++.+|.
T Consensus 99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i-~~~~~g-~~~~~~~~~~i~~~T--klvais~vSn~ 174 (405)
T COG0520 99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVI-PLDDDG-LLDLDALEKLITPKT--KLVALSHVSNV 174 (405)
T ss_pred HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEE-ecCCCC-CcCHHHHHHhcCCCc--eEEEEECcccc
Confidence 999999 589999999999997744 4456679999999 888554 789999999998888 99999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
||.+.| +++|+++|+++|+++++|.+++.. ..+......+.+++++|.+|++. ++..+|.+..+ +++.+.
T Consensus 175 tG~~~p---v~~I~~la~~~ga~v~VDaaq~~~---h~~idv~~l~~Df~afsgHKwl~-gP~GiGvLy~r---~~~l~~ 244 (405)
T COG0520 175 TGTVNP---VKEIAELAHEHGALVLVDAAQAAG---HLPIDVQELGCDFLAFSGHKWLL-GPTGIGVLYVR---KELLEE 244 (405)
T ss_pred ccccch---HHHHHHHHHHcCCEEEEECccccC---ccCCCchhcCCCEEEEccccccc-CCCceEEEEEc---hHHHhh
Confidence 999999 999999999999999999999833 23444455788999999999764 23458999999 788877
Q ss_pred HHHhhc----------------------cCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768 257 LLKVQD----------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAV 313 (400)
Q Consensus 257 l~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 313 (400)
+..... .-..+++.....++..+++..++ .+.++.++.+++.+++.+.|++++.+.+
T Consensus 245 l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i 324 (405)
T COG0520 245 LEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEI 324 (405)
T ss_pred cCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 733211 11224566666666666654222 2567778888889999999999998888
Q ss_pred cCCC---CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--------CCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 314 KGGE---GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 314 ~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+++. ....+.+.++. .+..++...|. ++||.++.|..|.. +..+|+|++. +|++|++.+++.|++
T Consensus 325 ~g~~~~~r~~~vsF~v~~--~~~~dv~~~L~-~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~ 401 (405)
T COG0520 325 YGPPDADRGGIVSFNVKG--IHPHDVATLLD-EKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKK 401 (405)
T ss_pred ecCCcccCceEEEEEeCC--CCHHHHHHHHH-hCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 8765 35566666665 35888998775 78899999987743 3459999998 999999999999998
Q ss_pred HHH
Q 015768 382 GLE 384 (400)
Q Consensus 382 ~l~ 384 (400)
+.+
T Consensus 402 ~~~ 404 (405)
T COG0520 402 ALA 404 (405)
T ss_pred Hhh
Confidence 764
No 123
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=6.4e-31 Score=250.00 Aligned_cols=332 Identities=15% Similarity=0.095 Sum_probs=233.4
Q ss_pred CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHH
Q 015768 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (400)
Q Consensus 29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a 101 (400)
+++.++|++++ ++++++|.+++++.+.+.....+ .|+......++++.+++++ |. ++.+++++ |+++
T Consensus 45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~----g~-~~~i~~~s-G~~a 118 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH----GK-ESALLFTS-GYVS 118 (410)
T ss_pred CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh----CC-CCEEEECc-HHHH
Confidence 45688888765 88889999999998888653211 1222112344555555554 64 45555555 5688
Q ss_pred HHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCC
Q 015768 102 FVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPS 177 (400)
Q Consensus 102 ~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~npt 177 (400)
+..++..+.. +|+.|++....|.++...++..|.++..+ +.+ +.+.+++.+.. ...+++|++++|+||+
T Consensus 119 ~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~-~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~t 191 (410)
T PRK13392 119 NDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVF-RHN------DLADLEEQLASVDPDRPKLIAFESVYSMD 191 (410)
T ss_pred HHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEE-eCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCC
Confidence 8888887753 88988888888888888888889887766 432 44555555541 1234899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Ccc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~ 252 (400)
|.+.+ +++|.++|++||+++|+||+|+.+.++.. ... ......+++++|+||++|++| ||++++ ++
T Consensus 192 G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~---~~ 262 (410)
T PRK13392 192 GDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS---AD 262 (410)
T ss_pred ccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC---HH
Confidence 99999 88999999999999999999995444321 111 111234588899999998777 899887 78
Q ss_pred HHHHHHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC
Q 015768 253 FATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH 330 (400)
Q Consensus 253 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (400)
+++.+...... .+...+++.+.++..+|+.. +......+++.++++++++.|++.+. .+.++. +.++.+.++..
T Consensus 263 ~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~i~~~~~- 338 (410)
T PRK13392 263 LIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL-KTSQTERDAHQDRVAALKAKLNANGI-PVMPSP-SHIVPVMVGDP- 338 (410)
T ss_pred HHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCCH-
Confidence 88877766543 23345667788777888742 22345567788889999999998764 555555 44544444421
Q ss_pred CCHHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 331 LDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 331 ~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+..++..+|++++||.+.++..+. +..++|++++. .+++|++.+++.|.++++++
T Consensus 339 ~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 339 TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 1345788888767899999865443 34689999976 79999999999999987754
No 124
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.8e-31 Score=251.71 Aligned_cols=336 Identities=15% Similarity=0.096 Sum_probs=242.9
Q ss_pred EEcCCCCCCCCCcHHHHHHHHHhhcCCCC---CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 33 VSLAQGVVYWQPPKMAMEKVKELVWDPSI---SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
+.|+.+... ++|+++++++.+++..... ..+........+.+.+.+.+++.+|.++++|++++|+|+++..++.++
T Consensus 2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 556665544 4678999999887764211 111111112344556666666666888999999999999999998887
Q ss_pred c----CCCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC
Q 015768 110 C----DAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 110 ~----~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~ 182 (400)
. ++|++|+++..+|+++.. .++..|++++.+ |.+++ +.+|++++++.+++++ ++|++++|+||||.++|
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~~~~~~n~tG~~~~ 156 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEI-PVDKS-GLIRLVDLERAITPDT--VLASIQHANSEIGTIQP 156 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEE-eeCCC-CCCCHHHHHHhcCCCC--EEEEEECCcCCcEeehh
Confidence 5 578999999988876654 456679999999 87755 4689999999987665 89999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH-HHHHHH--
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-ATQLLK-- 259 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~-~~~l~~-- 259 (400)
+++|.++|+++|+++++|+++... ..+......+.++++.|+||.+|.+| +|+++.+. ++ ...+..
T Consensus 157 ---~~~I~~l~~~~~~~vivD~~~~~g---~~~~~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~---~~~~~~~~~~~ 225 (381)
T PRK02948 157 ---IAEIGALLKKYNVLFHSDCVQTFG---KLPIDVFEMGIDSLSVSAHKIYGPKG--VGAVYINP---QVRWKPVFPGT 225 (381)
T ss_pred ---HHHHHHHHHHcCCEEEEEChhhcc---ccccCcccCCCCEEEecHHhcCCCCc--EEEEEEcC---CCCCCCcccCC
Confidence 888999999999999999887633 22233334567899999999998666 68877663 22 111110
Q ss_pred --hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-Cc----eEEEeeCCCCCCC
Q 015768 260 --VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-GA----IYLWARLPEKHLD 332 (400)
Q Consensus 260 --~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~----~~~~~~~~~~~~~ 332 (400)
......++++.+.+.++..+++...++.++..+++.++++++++.|++++. .+.... .. .++.+.++. .+
T Consensus 226 ~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~v~~~~~~~~~~~~i~~~~~~~--~~ 302 (381)
T PRK02948 226 THEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPL-PIEVEGHSTSCLPHIIGVTIKG--IE 302 (381)
T ss_pred CCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEeCCCccCcCCEEEEEeCC--CC
Confidence 111235678889999999998864456788889999999999999998864 222111 11 122223332 34
Q ss_pred HHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+++...| .++||.+..|..|.. .+++|+|++. +|++|++.+++.|+++++++.+
T Consensus 303 ~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 303 GQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred HHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 67777766 588999998876421 3689999998 8999999999999999887754
No 125
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-30 Score=219.99 Aligned_cols=359 Identities=19% Similarity=0.300 Sum_probs=264.9
Q ss_pred chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHH----hhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 015768 16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKE----LVWDP----SISKYGADEGLPELRDALVKKLNQENKL 87 (400)
Q Consensus 16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~----~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~~ 87 (400)
...|.++-+-++. ++.|.++.|++..- |++.+..+. .+.++ ....|+.++|...+.++++..+.+.+|+
T Consensus 17 ~~lMdDl~d~Lrt-~g~imLggGNPa~i--Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygw 93 (417)
T COG3977 17 TQLMDDLNDGLRT-PGAIMLGGGNPARI--PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGW 93 (417)
T ss_pred HHHHHHHHhhccC-CCceeeCCCCcccC--hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCC
Confidence 4556666655555 44899999986653 444443322 22222 2568999999999999999999999864
Q ss_pred --CCCcEEEeCChHHHHHHHHHHhcC---CCC--EEEEe-CCCccchhHHHHhcCcEEEEecc---CCCCC---CCCCHH
Q 015768 88 --YKSSVMVTAGANQAFVNIVLTLCD---AGD--SVVMF-APYYFNSYMSFQMTGVTHILVGP---CSSKT---LHPDAD 153 (400)
Q Consensus 88 --~~~~i~~~~g~t~a~~~~~~~l~~---~gd--~vlv~-~p~~~~~~~~~~~~g~~~~~~~~---~~~~~---~~~~~e 153 (400)
+.++|.+|+|++.+.+.++..+.. .|+ .|+.+ .|.|-++.++--.-. ..+.++| +.+.| +.+|-+
T Consensus 94 nit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~ 172 (417)
T COG3977 94 NITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFE 172 (417)
T ss_pred CCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHH
Confidence 689999999999999999988853 242 45554 899988776432111 1122222 22333 566766
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCCccccCCCcEEEEeccc
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFS 231 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~s 231 (400)
++. +.+.+ .+|+++.|.||||.++..+|+.+|-+++++||+++++|.+|+--..+ -+.......++.+.+.|+|
T Consensus 173 ~l~--i~e~~--g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLS 248 (417)
T COG3977 173 HLH--IGEST--GAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLS 248 (417)
T ss_pred Hcc--ccccc--ceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehh
Confidence 654 33444 88999999999999999999999999999999999999999832211 0122344578999999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHH-----HHHHHHHH
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVR-----NREIIREA 304 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~-----~~~~l~~~ 304 (400)
|. |+||.|+|.++.. +++++.+.......+..+..+..+.+..+++.++ ..-+++++...+ ....++..
T Consensus 249 K~-GLPG~R~GIiIan---e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~ 324 (417)
T COG3977 249 KL-GLPGSRCGIIIAN---EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRY 324 (417)
T ss_pred hc-CCCCcceeEEEcc---HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 95 6899999999999 8999999988877777888889999999999865 222344433333 23344445
Q ss_pred hccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---------CCCeEEEEeccCCHHHHHHH
Q 015768 305 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------CRGHLRISFGGLVEDDCKAA 375 (400)
Q Consensus 305 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---------~~~~iRi~~~~~~~~~~~~~ 375 (400)
|-+.++ .+..|+++.|.|+=+.+...+.++++++| +++|+.+.||..|- ...++|++... ++++++.+
T Consensus 325 lp~~~~-~iHkpEGAIFlWLWf~dLPItt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~-~~~~ie~G 401 (417)
T COG3977 325 LPEYRC-LIHKPEGAIFLWLWFKDLPITTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP-EPEKIEKG 401 (417)
T ss_pred cCccce-eeecCCcceeehhhhccCCCCHHHHHHHH-HhCeEEEecccccCCCCCCCCCCccceEEEecCC-CHHHHHHH
Confidence 544444 66789999999998877667899999987 58999999999883 24689999886 89999999
Q ss_pred HHHHHHHHHHHhcc
Q 015768 376 ADRLRRGLEELVKD 389 (400)
Q Consensus 376 ~~~l~~~l~~~~~~ 389 (400)
+++|.+.+++..++
T Consensus 402 va~lae~ve~~yq~ 415 (417)
T COG3977 402 VAILAEEVERAYQE 415 (417)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999987654
No 126
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=6.6e-31 Score=249.37 Aligned_cols=337 Identities=15% Similarity=0.155 Sum_probs=240.7
Q ss_pred hcCCCeEEcCCCC--CCCCC-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. +.++. +|.+.+++.+.+...... ......+.+.++++++.+..+ .+++++++|+++|+.
T Consensus 36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~la~~l~~~~~--~~~v~~~~gg~eA~~ 110 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHT---SNLYYIEPQEELAEKLVELSG--MDKVFFCNSGAEANE 110 (396)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccc---ccccCCHHHHHHHHHHHhhcC--CCEEEECCCcHHHHH
Confidence 5678899998875 44554 689999999988753211 112236788889998888765 479999999999999
Q ss_pred HHHHHhcCCC-------CEEEEeCCCccchhHHHHhcCcEEEE---eccCCCCCC----CCCHHHHHHhhccCCCCeEEE
Q 015768 104 NIVLTLCDAG-------DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKTL----HPDADWLEKTLETKPTPKLVS 169 (400)
Q Consensus 104 ~~~~~l~~~g-------d~vlv~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~~----~~~~e~l~~~l~~~~~~~~v~ 169 (400)
.+++.+...+ ++|++..++|+++.......+..... ..+.. .++ ..|++++++.+.++ +++|+
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~--~~~vi 187 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITDK--TAAVM 187 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCCC--eEEEE
Confidence 9999775433 67999999998877554443322110 10222 121 12789999998654 49999
Q ss_pred EeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768 170 VVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 170 l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
+++++||+| ..++.+.+++|.++|++||+++|+||+|.++...+........+....+.++||.++ +|+|+||++.+
T Consensus 188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~-~G~rig~~~~~- 265 (396)
T PRK02627 188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLG-GGVPIGAVLAK- 265 (396)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhh-CCcccEEEEEc-
Confidence 998899999 688999999999999999999999999998765443211111111111347899998 99999999998
Q ss_pred CcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh----ccCCCCcccCCCCceEEEe
Q 015768 249 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL----SPLGEGAVKGGEGAIYLWA 324 (400)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~~~~~~~~~~~~~~~ 324 (400)
+++++.+.......+++.+++.+.++.++|+...+ .+..++.+++.+.+++.| .+++.+....+ .+.++|+
T Consensus 266 --~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~i 340 (396)
T PRK02627 266 --EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE--EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLMIGI 340 (396)
T ss_pred --HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEEEEE
Confidence 77888776555566788899999999999874221 223334444444444444 33433223333 3788898
Q ss_pred eCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++. +..+++..++ ++||.+.|+. .+++|++++. .+++++++++++|.++++++
T Consensus 341 ~~~~---~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 341 ELDR---PAAEIVKKAL-EKGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred EecC---cHHHHHHHHH-HCCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 8842 5778888887 5699999864 4789999864 79999999999999998765
No 127
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-31 Score=237.46 Aligned_cols=333 Identities=18% Similarity=0.164 Sum_probs=255.7
Q ss_pred CCcHHHHHHHHHhhcCCCCCC---CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh--c----CCC
Q 015768 43 QPPKMAMEKVKELVWDPSISK---YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL--C----DAG 113 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~---y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l--~----~~g 113 (400)
++.|+|+++|..++.....++ +........+.+...+.+++..|+++++|+||+|+|++++.++... . +.|
T Consensus 12 p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~ 91 (386)
T COG1104 12 PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKG 91 (386)
T ss_pred CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCC
Confidence 457999999998887631111 1111122344555555566666999999999999999999999983 2 257
Q ss_pred CEEEEeCCCccchhHHHHhc---CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 114 DSVVMFAPYYFNSYMSFQMT---GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 114 d~vlv~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
.+|+++.-.|+++.+.++.+ |+++.++ |++.+| .+|+++|+++|++++ .+|.+.+.||.+|.+.| +.+|.
T Consensus 92 ~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl-~V~~~G-~v~~e~L~~al~~~T--~LVSim~aNnE~G~IQp---I~ei~ 164 (386)
T COG1104 92 KHIITSAIEHPAVLNTCRYLERQGFEVTYL-PVDSNG-LVDLEQLEEALRPDT--ILVSIMHANNETGTIQP---IAEIG 164 (386)
T ss_pred CeEEEcccccHHHHHHHHHHHhcCCeEEEe-CCCCCC-eEcHHHHHHhcCCCc--eEEEEEecccCeeeccc---HHHHH
Confidence 89999999999999888776 9999999 999887 689999999999887 99999999999999999 99999
Q ss_pred HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc--HHHHHHHHHhhccCCcCc
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--EGFATQLLKVQDNIPICA 268 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~--~~~~~~l~~~~~~~~~~~ 268 (400)
++|+++++++++|.++. .+..+........++...|.||..|+.| +|.++.+++. ..++.--...+.....+.
T Consensus 165 ~i~k~~~i~fHvDAvQa---~Gkipi~~~~~~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTe 239 (386)
T COG1104 165 EICKERGILFHVDAVQA---VGKIPIDLEELGVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTE 239 (386)
T ss_pred HHHHHcCCeEEEehhhh---cCceeccccccCcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcCCCCCCCCCc
Confidence 99999999999999998 4444444444457889999999998667 5776655321 011111112223345677
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC-CCCcccCC---CCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-GEGAVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
|.+...++..+++...+.++....++.+++++|.+.|.+. +.+.+.+. .-.+.+.+.++. .+++.+...| +.+
T Consensus 240 nv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g--v~gE~ll~~L-~~~ 316 (386)
T COG1104 240 NVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG--VEGESLLLAL-DLA 316 (386)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCC--CcHHHHHHhc-ccc
Confidence 8888888888888755667888888999999999999975 55444332 234566677775 4688888766 688
Q ss_pred CeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccC
Q 015768 345 GVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG 390 (400)
Q Consensus 345 gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~ 390 (400)
||.+..|+.|.. .+.||||++. ++++|++.+++.+.++++.+++..
T Consensus 317 gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~~ 382 (386)
T COG1104 317 GIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRELS 382 (386)
T ss_pred CeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999942 3689999999 999999999999999999987643
No 128
>PLN02721 threonine aldolase
Probab=100.00 E-value=1.2e-30 Score=243.89 Aligned_cols=329 Identities=18% Similarity=0.241 Sum_probs=230.1
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~ 110 (400)
.+++|+.+.++. +++.+.+++.+.........| .....++++++++++ +. +.+++++++++++..++.+++
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~----~~--~~~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 6 RVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIF----GK--EAALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred hhhhhhcccccC-CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHh----CC--ceeEEecCccHHHHHHHHHHc
Confidence 467888888776 578888888764111112223 333678889988888 43 346777777888888888877
Q ss_pred C-CCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-----CCCeEEEEeC-CCCCCccC
Q 015768 111 D-AGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-----PTPKLVSVVN-PGNPSGTY 180 (400)
Q Consensus 111 ~-~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-----~~~~~v~l~~-p~nptG~~ 180 (400)
+ +||+|++++|+|..... .+...|++++.+ |.+++ +.+|+|.+++.+++. +.+++|++++ ++||+|.+
T Consensus 77 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~ 154 (353)
T PLN02721 77 DVRGSEVILGDNSHIHLYENGGISTLGGVHPRTV-KNNED-GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRC 154 (353)
T ss_pred cCCCCeEEEcCccceehhcccchhhhcCceeEec-CCCcC-CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCcc
Confidence 7 99999999999976665 567789999988 77654 468999999999731 2348999987 47899999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCCccccCCCcEEEEeccccccCCCcceeEE-EEccCCcHHHHHHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQL 257 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~-i~~~~~~~~~~~~l 257 (400)
+|.+++++|.++|++||+++|+|++|...... +..........+.++.|+||+++. +.|+ ++.+ +++++.+
T Consensus 155 ~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~---~~G~~~~~~---~~~~~~~ 228 (353)
T PLN02721 155 LSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA---PVGSVIVGS---KSFIRKA 228 (353)
T ss_pred ccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC---ceeeEEecC---HHHHHhH
Confidence 99999999999999999999999998643211 111111112344566789999963 3465 5565 7888777
Q ss_pred HHhhccCCcCccHHHHHH--HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCC-CCCH
Q 015768 258 LKVQDNIPICASIISQHL--ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEK-HLDD 333 (400)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~ 333 (400)
.........+++.....+ +...++ ++.. ..++..++++.+.+.|++++.+.+ ..+..++++|++++.. ..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (353)
T PLN02721 229 KRLRKTLGGGMRQVGVLAAAALVALQ---ENVP-KLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITA 304 (353)
T ss_pred HHHHHhcCCCeehhHHHHHHHHHHHH---HHHH-HHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccH
Confidence 665543332333222222 222332 2222 334446678889999998866433 3333367899998752 1257
Q ss_pred HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
..++++|. ++||.+.|+. ++++|++++. ++++++++++++|++++..
T Consensus 305 ~~~~~~L~-~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 305 EKLCKSLE-EHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred HHHHHHHH-hCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 78888886 8999999874 6799999985 8999999999999987753
No 129
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=100.00 E-value=1.4e-30 Score=242.15 Aligned_cols=318 Identities=19% Similarity=0.154 Sum_probs=228.3
Q ss_pred CCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768 39 VVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (400)
Q Consensus 39 ~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv 118 (400)
++++++++.+++++.+..... ..|++.....++++.+++++ | ++++++++|+|+++..++.++.++||+|++
T Consensus 5 ~~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~----g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~ 76 (338)
T cd06502 5 DTVTGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF----G--KEAALFVPSGTAANQLALAAHTQPGGSVIC 76 (338)
T ss_pred ccCCCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh----C--CCeEEEecCchHHHHHHHHHhcCCCCeEEE
Confidence 466778999999998865432 24545555555665555554 6 567888888999999999999999999999
Q ss_pred eCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 119 FAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 119 ~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-----~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
+.|+|..... ..+..|++++.+ +.+. +.+|++.+++++++. ..+++|++++|+|| |.+++.+++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~ 152 (338)
T cd06502 77 HETAHIYTDEAGAPEFLSGVKLLPV-PGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS 152 (338)
T ss_pred ecCcceeeecCCcHHHHcCceEEee-cCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence 9999977553 345579999988 7654 468999999998741 13599999999997 6677999999999
Q ss_pred HHHHHcCCEEEEccccccccc--CCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--CCc
Q 015768 191 DLCKAAGSWLVVDNTYEYFMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN--IPI 266 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--~~~ 266 (400)
++|++||+++|+|++|..+.. .+........+.++++.|+||++|++| .++++.+ +++++.+...... .++
T Consensus 153 ~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~---~~~~~~~~~~~~~~~~~~ 227 (338)
T cd06502 153 ALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGN---RDFIARARRRRKQAGGGM 227 (338)
T ss_pred HHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCcc--ceEEECC---HHHHHHHHHHHHHhCCCh
Confidence 999999999999999864432 122111112344577889999998776 2345566 7888888765432 234
Q ss_pred CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH--Hhc
Q 015768 267 CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA--HRH 344 (400)
Q Consensus 267 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~ 344 (400)
+.+.+.+.++..+|+.. .+ .+..+++.++++++.+.|++++. .+..+. ++++.+.++........+...+. .++
T Consensus 228 ~~~~~~~~a~~~~L~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~l~~~~~~ 303 (338)
T cd06502 228 RQSGFLAAAGLAALEND-LW-LRRLRHDHEMARRLAEALEELGG-LESEVQ-TNIVLLDPVEANAVFVELSKEAIERRGE 303 (338)
T ss_pred hhHHHHHHHHHHHhcCc-hH-HHHHHHHHHHHHHHHHHHHhcCC-Cccccc-CCeEEEecCCccHHHHHHHHHHHHhhhC
Confidence 56677778888888752 33 45667888888999999999876 455444 66777776532111223333332 157
Q ss_pred CeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 345 gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
|+.+.+.. .+++||+++. ++++|++++++++++
T Consensus 304 gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 304 GVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred CEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 99987743 3899999987 799999999998864
No 130
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=4.9e-31 Score=244.32 Aligned_cols=319 Identities=16% Similarity=0.179 Sum_probs=229.3
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD 111 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~ 111 (400)
+|+|+++.++. ++|.+++++.+.... ...|++.....++++++++++ |++ .+++++|+++++..++.++++
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~----g~~--~~~v~~~g~~a~~~~l~~~~~ 71 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS----GKE--AALFLPTGTQANLVALLSHCE 71 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh----CCC--eEEEeCchHHHHHHHHHHhcC
Confidence 47899988888 889999998775543 456877777889999999887 653 446888888999999889999
Q ss_pred CCCEEEEeCCCccchhHH--HHhcC-cEEEEeccCCCCCCCCCHHHHHHhhccCC----CCeEEEEeCCCCCCccCCCHH
Q 015768 112 AGDSVVMFAPYYFNSYMS--FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 112 ~gd~vlv~~p~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~~~----~~~~v~l~~p~nptG~~~~~~ 184 (400)
+||+|+++.|+|...... ....+ ++++.+ +.++ ++.+|++++++.+.++. .+++|++++|+ +|.+++.+
T Consensus 72 ~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~ 147 (333)
T PRK10534 72 RGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPI-DAAA-DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPRE 147 (333)
T ss_pred CCCeeEEechhhhhHhcCCchHHhcCceEEee-cCCC-CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHH
Confidence 999999998888532321 23344 677777 7664 46789999999886521 24899999765 59999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccC--CCCccccCCCcEEEEeccccccCCCcceeE-EEEccCCcHHHHHHHHHhh
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQLLKVQ 261 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G-~i~~~~~~~~~~~~l~~~~ 261 (400)
++++|+++|++|++++++||+|...... +............++.||||.+|++ +| |++++ +++++.+....
T Consensus 148 ~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~---~G~~~~~~---~~~i~~~~~~~ 221 (333)
T PRK10534 148 YLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP---VGSLLVGN---RDYIKRARRWR 221 (333)
T ss_pred HHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc---ccceEEcC---HHHHHHHHHHH
Confidence 9999999999999999999998743211 1111111111123334899998743 57 67777 88999888776
Q ss_pred ccCC--cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHH
Q 015768 262 DNIP--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW 339 (400)
Q Consensus 262 ~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (400)
.... .+.+.+.+.++..+|+. ..+..++..++++++.+.|++++. .+..+. ++|++++++. .+..++.+.
T Consensus 222 ~~~~~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~r~~l~~~L~~~g~-~~~~~~-~nfv~~~~~~--~~~~~~~~~ 293 (333)
T PRK10534 222 KMTGGGMRQAGILAAAGLYALKH----NVARLQEDHDNAAWLAEQLREAGA-DVMRQD-TNMLFVRVGE--EQAAALGEY 293 (333)
T ss_pred HHhCCchhhHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHhCCC-ccCCCC-ceEEEEECCc--hhHHHHHHH
Confidence 5333 22334556666666643 134444455677899999999865 666664 9999999974 135566654
Q ss_pred HHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 340 LAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 340 l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
| +++||.+.|+. ++|++.+. .|++++++++++|++++.
T Consensus 294 l-~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 294 M-RERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred H-HHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 4 68999998863 58998753 799999999999987654
No 131
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=1.8e-30 Score=246.55 Aligned_cols=329 Identities=16% Similarity=0.085 Sum_probs=235.1
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
.+.|+.+... ++|+.+++++.+.+.... ...|....+..+..+.+.+.+++.+|.++++|++++|+++++..++.+
T Consensus 18 ~~yl~~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGT-QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccC-CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence 6888776544 367889999988876432 123433333344556666666666688777899999999999988877
Q ss_pred h---cCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 109 L---CDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 109 l---~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
+ .+|||+|++..++|++.. ..++..|++++.+ +.+++++.++++++++.+++++ ++|++++|+||||.+.
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~l~~~i~~~~--~lv~i~~~~n~tG~~~ 173 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWA-RVDEATGELHPDDLASLLSPRT--RLVAVTAASNTLGSIV 173 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEE-eccccCCCcCHHHHHHhcCCCc--eEEEEeCCCCCCCccC
Confidence 6 579999999999997754 3456689999998 8876445789999999998665 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 261 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~ 261 (400)
| +++|.++|++||+++++|+++... ..+......+.+++++|++|++| .++|+++.+ +++++.+....
T Consensus 174 ~---~~~i~~~~~~~~~~~ivD~a~~~~---~~~~~~~~~~~d~~~~s~~K~~g---~~~G~l~~~---~~~~~~l~~~~ 241 (397)
T TIGR01976 174 D---LAAITELVHAAGALVVVDAVHYAP---HGLIDVQATGADFLTCSAYKFFG---PHMGILWGR---PELLMNLPPYK 241 (397)
T ss_pred C---HHHHHHHHHHcCCEEEEehhhhcc---ccCCCHHHcCCCEEEEechhhcC---CceEEEEEc---HHHHhhCCCcc
Confidence 9 899999999999999999998632 22222233456788899999985 358999988 67776665432
Q ss_pred ccC----------CcCccHHHHHHHHHHhcC----Cc-----------HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768 262 DNI----------PICASIISQHLALYSLQT----GP-----------EWVTERVKDLVRNREIIREALSPLGEGAVKGG 316 (400)
Q Consensus 262 ~~~----------~~~~~~~~~~~~~~~l~~----~~-----------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 316 (400)
... ..+++.....++..+++. +. .+.++..++..++++++++.|++++.+++..+
T Consensus 242 ~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 321 (397)
T TIGR01976 242 LTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGV 321 (397)
T ss_pred ccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 111 123344444444333332 10 02455667777888999999998875565543
Q ss_pred ----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----------CCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 317 ----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----------CRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 317 ----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
..+.++.+.++. .+..++.++|. ++||.+..|..|. ..+++|+|++. +|++|++.+++.|
T Consensus 322 ~~~~~~~~~~~~~~~~--~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 322 ARLAARVPTVSFTVHG--LPPQRVVRRLA-DQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCccCCCceEEEEeCC--cCHHHHHHHHH-HCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 124566666653 24677888775 7899999886553 24689999988 8999999888764
No 132
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=2.8e-30 Score=241.19 Aligned_cols=330 Identities=20% Similarity=0.186 Sum_probs=235.6
Q ss_pred CeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 31 NAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 31 ~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
.+++|+++. ...+.||++++++.+.+++... ..|....+.....+++.+.+++.++.+ +.++++++++++..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~--~~iv~~sg~~a~~~~~~ 79 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE--AALVFSSGYAANDGVLS 79 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC--CEEEeccHHHHHHHHHH
Confidence 467888876 6667789999999999976321 122222244455555555555555653 35666677789998889
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC---CCCeEEEEeCCCCCCccCCCHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK---PTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~---~~~~~v~l~~p~nptG~~~~~~ 184 (400)
++.++||+|+++.|+|+++...++..|++++.+ +. .+.+.+++++++. ..++++++++++||+|...+
T Consensus 80 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~-- 150 (349)
T cd06454 80 TLAGKGDLIISDSLNHASIIDGIRLSGAKKRIF-KH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP-- 150 (349)
T ss_pred HhcCCCCEEEEehhhhHHHHHHHHHcCCceEEe-cC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC--
Confidence 999999999999999999988888899998877 42 3677888888742 33578888899999999998
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCC--C---ccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGR--K---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~---~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+++|.++|++||+++|+|++|+.+..... . ......+.+++++|+||.++.+| ||++.+ +++.+.+..
T Consensus 151 -~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~---~~~~~~~~~ 223 (349)
T cd06454 151 -LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS---KELIDYLRS 223 (349)
T ss_pred -HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---HHHHHHHHH
Confidence 88999999999999999999975433211 1 11123466899999999997544 899887 677776655
Q ss_pred hhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768 260 VQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 337 (400)
Q Consensus 260 ~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (400)
.... ...+.+...+.++..+++...+ .+...+++.++++.+.+.|++++. .+..+.++.+.++.++.. .+..+++
T Consensus 224 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~ 300 (349)
T cd06454 224 YARGFIFSTSLPPAVAAAALAALEVLQG-GPERRERLQENVRYLRRGLKELGF-PVGGSPSHIIPPLIGDDP-AKAVAFS 300 (349)
T ss_pred hchhhhccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCC-cccCCCCCcEEEEeCCCh-HHHHHHH
Confidence 3321 2234566667677777764222 356678888999999999988754 444443355455544422 2467888
Q ss_pred HHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
.+|. ++||.+.++.... ..+++|++++. ++++++++++++|+++
T Consensus 301 ~~L~-~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 301 DALL-ERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHHH-hCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 8886 5699998754321 24799999987 7999999999999764
No 133
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.4e-30 Score=244.54 Aligned_cols=336 Identities=15% Similarity=0.174 Sum_probs=236.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+... .+. ....+...++++.+.+..+ .+++++++|+++|++
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~ 102 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVE 102 (389)
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHH
Confidence 5678899998864 3343 689999999999876321 111 1123344566666665543 578999999999999
Q ss_pred HHHHHh----cCCCC----EEEEeCCCccchhHHHHhcCcEEEEe---ccCCCCCCC----CCHHHHHHhhccCCCCeEE
Q 015768 104 NIVLTL----CDAGD----SVVMFAPYYFNSYMSFQMTGVTHILV---GPCSSKTLH----PDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 104 ~~~~~l----~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~---~~~~~~~~~----~~~e~l~~~l~~~~~~~~v 168 (400)
.+++++ ..+|| +|++.+++|++........+...... .|.. .++. .|++.+++.++++ +++|
T Consensus 103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~--~~av 179 (389)
T PRK01278 103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITPN--TAAI 179 (389)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCCC--eEEE
Confidence 999887 34565 89999999999886665544332221 0111 1111 4889999998764 4899
Q ss_pred EEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768 169 SVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 169 ~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~ 247 (400)
+++.++|++| .+++.+++++|.++|++||+++|+||+|.++...+........+...-+.++||.++ +|+|+||++++
T Consensus 180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~-~G~~ig~~~~~ 258 (389)
T PRK01278 180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIG-GGFPLGACLAT 258 (389)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhcc-CCcceEEEEEc
Confidence 9997788888 788999999999999999999999999997765443211111111112458899998 89999999998
Q ss_pred CCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CC-CCcccCCCCceEE
Q 015768 248 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LG-EGAVKGGEGAIYL 322 (400)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~~~~~~~~~ 322 (400)
+++++.+.......+++.+++.+.++.++|+..++ .+..++.+++.+++++.|+. .+ .+....+. +.++
T Consensus 259 ---~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~-G~~~ 332 (389)
T PRK01278 259 ---EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILA--PGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGK-GLLL 332 (389)
T ss_pred ---HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecc-cEEE
Confidence 67777777666667888999999999888864211 12233344444444444433 33 22233343 6777
Q ss_pred EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 323 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 323 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
++.++. +..+++.+|+ ++||.+.|+. .+++||+++. .+++++++++++|.+++.+
T Consensus 333 ~i~~~~---~~~~~~~~l~-~~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 333 GLKCVV---PNRDLVQALR-DEGLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred EEEEec---CHHHHHHHHH-HCCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 777753 4678888887 5699999863 5899999875 7999999999999999865
No 134
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=4.9e-30 Score=243.45 Aligned_cols=336 Identities=17% Similarity=0.125 Sum_probs=237.9
Q ss_pred CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCC--CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISK--YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
++++++|++++ .++..+|++++++.+.+.+...+. .....+.......+++.+++.+|. +..++++++++|+..+
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~--~~~l~~~sG~~an~~a 121 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK--ESALVFTSGYVANDAT 121 (402)
T ss_pred CeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC--CeEEEECchHHHHHHH
Confidence 47789998876 888899999999999987643211 001112233344455555544463 4567777778999999
Q ss_pred HHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015768 106 VLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 106 ~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~ 181 (400)
+..+.. +++.|+.....|.+....++..|+.+..+ +. .|.+++++.++. ...+++|++++|+||+|.+.
T Consensus 122 i~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~ 194 (402)
T TIGR01821 122 LATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIF-RH------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA 194 (402)
T ss_pred HHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEE-CC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc
Confidence 998865 67777777677777777788888877666 42 266777777762 11358999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--cc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--HC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
| +++|.++|++||+++|+||+|+.+.++... .. ....+.+++++|+||++|++| ||++++ +++++.
T Consensus 195 ~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~---~~~~~~ 265 (402)
T TIGR01821 195 P---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS---RKLIDA 265 (402)
T ss_pred C---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC---HHHHHH
Confidence 9 899999999999999999999854443211 11 111234788899999998777 899888 788888
Q ss_pred HHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768 257 LLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 257 l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (400)
+...... ++.+.++..+.++.++|+...+. ....+++.++++++.+.|++++. .+..+. +.++.+.++.. ....
T Consensus 266 l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~i~~i~~~~~-~~a~ 341 (402)
T TIGR01821 266 IRSYAPGFIFTTSLPPAIAAGATASIRHLKES-QDLRRAHQENVKRLKNLLEALGI-PVIPNP-SHIVPVIIGDA-ALCK 341 (402)
T ss_pred HHHhCcCceecCcCCHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCH-HHHH
Confidence 7754432 34456777788887887752222 44555667888999999988764 555555 55555665431 1245
Q ss_pred HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
++...|++++||.+.+..++. +..++||+++. ++++|++++++.|+++++++
T Consensus 342 ~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 342 KVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred HHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 678777766799998765433 34689999987 89999999999999998764
No 135
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=4.5e-30 Score=242.28 Aligned_cols=329 Identities=16% Similarity=0.172 Sum_probs=240.2
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCC----CCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHHHHHHHHhc-----CC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYG----ADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVNIVLTLC-----DA 112 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~----~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~~~~~~~l~-----~~ 112 (400)
+++++|++++.+++.+.....++ +..+...++++++++... .+. ++++|++|+|+|++++.++.++. ++
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~-~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~ 88 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKG-INARDLDDIIITSCATESNNWVLKGVYFDEILKG 88 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHH-cCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccC
Confidence 35678999998888653211111 123456677777776543 344 68999999999999999998762 45
Q ss_pred -CCEEEEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 113 -GDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 113 -gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
+++|+++...|+++... ++..|++++.+ |.++++ .+|++.+++.+++++ +++++++|+||||.++| +++
T Consensus 89 ~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v-~~~~~g-~~d~~~l~~~i~~~t--~lv~~~~~~n~tG~~~~---~~~ 161 (382)
T TIGR03403 89 GKNHIITTEVEHPAVRATCAFLESLGVEVTYL-PINEQG-TITAEQVREAITEKT--ALVSVMWANNETGMIFP---IKE 161 (382)
T ss_pred CCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE-ecCCCC-CCCHHHHHHhcccCC--eEEEEEcccCCCccccC---HHH
Confidence 47899998888776644 45689999999 887664 679999999998765 89999999999999999 788
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH---HHhhccCC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL---LKVQDNIP 265 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l---~~~~~~~~ 265 (400)
|.++|+++|+++++|+++... ..+......+.++++.|++|++|.+| +|+++.++.. .+...+ ........
T Consensus 162 I~~la~~~g~~~ivD~a~~~g---~~~~~~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~-~~~p~~~g~~~~~~~~~ 235 (382)
T TIGR03403 162 IGEICKERGVLFHTDAVQAIG---KIPVDVQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGV-ELTPLFHGGEHMGGRRS 235 (382)
T ss_pred HHHHHHHcCCEEEEechhhcC---CCccCccccCCCEEEEcchhhCCCCc--eEEEEECCCC-CCCCcccCCCCCCCccc
Confidence 899999999999999998732 22223334456789999999887666 5777665421 111111 00111235
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEeeCCCCCCCHHHHHHHHHH
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
.+++.+.+.++..+++...+..+...++++++++++.+.|++++++.+..+. ...++.+.++. .+.+.+..+| .
T Consensus 236 gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L-~ 312 (382)
T TIGR03403 236 GTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKG--VEGEAMLWDL-N 312 (382)
T ss_pred CCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCC--CCHHHHHHhh-c
Confidence 6678888888888887544556677788899999999999988776666543 13455566653 3577777776 5
Q ss_pred hcCeEEeCCCccC-------------------CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 343 RHGVVVIPGGACG-------------------CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 343 ~~gi~v~~g~~~~-------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++||.++.|..|. ..+.+|+|++. +|++|++.+++.|+++++++..
T Consensus 313 ~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 313 KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8899999887662 12579999998 9999999999999999887653
No 136
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=5.8e-30 Score=243.35 Aligned_cols=346 Identities=19% Similarity=0.158 Sum_probs=242.5
Q ss_pred HHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC------CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC
Q 015768 23 QELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP------SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA 96 (400)
Q Consensus 23 ~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~ 96 (400)
.......++.++|..+.+.. ++.|++++.+.+... ....|....+.+.+++..++++++.+|.+...++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~- 88 (402)
T cd00378 12 KKENERQRETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPH- 88 (402)
T ss_pred HHHHHHHHhCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecC-
Confidence 33334446788888877664 689999998765321 122243445566777778888888888876555555
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-----HHhcCcEEEEeccCCCC--CCCCCHHHHHHhhc-cCCCCeEE
Q 015768 97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-----FQMTGVTHILVGPCSSK--TLHPDADWLEKTLE-TKPTPKLV 168 (400)
Q Consensus 97 g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l~-~~~~~~~v 168 (400)
|+++|+..++.++.+|||+|+++.|+|+++... ++..|.++..+ +.+.+ ++.+|++.+++.+. ++ ++++
T Consensus 89 sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~id~~~l~~~i~~~~--~~~v 165 (402)
T cd00378 89 SGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESV-PYGVDPETGLIDYDALEKMALEFK--PKLI 165 (402)
T ss_pred CcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEe-cCCcCcccCCcCHHHHHHHHHhCC--CCEE
Confidence 567999999999999999999999999876543 56678776666 55443 57889999999986 44 4899
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc-ccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE-YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~ 247 (400)
++++++|| ...+ +++|.++|++||+++|+|++|. ++.+.+....... ..+++++|+||++ +|+|+||++.+
T Consensus 166 ~~~~~~~~--~~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK~l--~G~~gg~i~~~ 237 (402)
T cd00378 166 VAGASAYP--RPID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHKTL--RGPRGGLILTR 237 (402)
T ss_pred EecCcccC--CCcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEeccccCC--CCCCceEEEec
Confidence 88888765 4556 8899999999999999999974 3333332111122 3458899999987 67889999987
Q ss_pred CCcHHHHHHHHHhhccCCcC-ccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEe
Q 015768 248 SEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWA 324 (400)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~ 324 (400)
+ +++.+++.........+ +......++..++.... .+..++++++.++++++.+.|++++. .+. .+.+++++|+
T Consensus 238 ~--~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~v~v 314 (402)
T cd00378 238 K--GELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGF-KVVSGGTDNHLVLV 314 (402)
T ss_pred c--HHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC-eEeecCCCCeEEEE
Confidence 4 47888887654332332 22233333344443212 24567788899999999999998865 443 4566899999
Q ss_pred eCCCCCCCHHHHHHHHHHhcCeEEeCCCccC------CCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Q 015768 325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------CRGHLRISFGG-----LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~ 386 (400)
+++....+...+.. +++++||.+.++..+. .+.++|++++. ++++|++.+++.|++++.+-
T Consensus 315 ~~~~~~~~~~~~~~-~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~ 386 (402)
T cd00378 315 DLRPKGITGKAAED-ALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDA 386 (402)
T ss_pred eCCccCCCHHHHHH-HHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhcc
Confidence 99753334555555 4568999997643221 34689999865 25899999999999877653
No 137
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=8e-30 Score=239.09 Aligned_cols=351 Identities=13% Similarity=0.110 Sum_probs=255.5
Q ss_pred HHHHHHhcCCCeEEcCCCCC--CCCCc---HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEe
Q 015768 21 QIQELVRGAKNAVSLAQGVV--YWQPP---KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT 95 (400)
Q Consensus 21 ~~~~~~~~~~~~i~~~~~~~--~~~~~---~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~ 95 (400)
|...+.+.|.+.+.|..+++ ++..+ ..+.++..+++..+. ..|+...|..++++++++++ | .+++++|
T Consensus 2 r~~~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~----g--~~~vv~t 74 (431)
T cd00617 2 RERALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLF----G--FKHIIPT 74 (431)
T ss_pred hHHHHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHH----C--CCeEEEc
Confidence 44566788899999999998 66555 366666677766553 45999999999999999998 3 3679999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC---------CCCCCHHHHHHhhccC--CC
Q 015768 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETK--PT 164 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~e~l~~~l~~~--~~ 164 (400)
+|+++|+..++.++++|||.| +++|.|..+...+...|+.++.+ +.++. .+++|++.|++.++++ ..
T Consensus 75 ~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v-~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~ 152 (431)
T cd00617 75 HQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDL-VIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN 152 (431)
T ss_pred CCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEE-ecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence 999999999999999999987 68899999999999999999998 77632 3459999999999854 22
Q ss_pred CeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEccccccc--cc-----CCCCccccCCCcEEEEeccccccCC
Q 015768 165 PKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTYEYF--MY-----DGRKHCCVEGDHVVNLFSFSKAYGM 236 (400)
Q Consensus 165 ~~~v~l~~p~npt-G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~--~~-----~~~~~~~~~~~~~i~~~s~sK~~g~ 236 (400)
+++|+++.|+||+ |.+++.+++++|.++|++||+++|+|+++... .+ ++...... .+..+.++|++|.+.+
T Consensus 153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si-~ei~~e~~s~sd~~~m 231 (431)
T cd00617 153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI-AEIAREMFSYADGCTM 231 (431)
T ss_pred ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH-HHHHHHhhccCCEEEE
Confidence 5889999999998 99999999999999999999999999996532 11 11111111 0111223455555544
Q ss_pred Ccce------eEEEEccCCcHHHHHHHHHhh----ccCC-cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 237 MGWR------VGYIAYPSEVEGFATQLLKVQ----DNIP-ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 237 ~g~~------~G~i~~~~~~~~~~~~l~~~~----~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
+|++ .||+++++ ++++++++... ...+ .+.+.....+++.+|++..+ .+..+...++++++.+.|
T Consensus 232 S~~K~~~~~~GG~i~~~d--~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~~r~~l~~~L 307 (431)
T cd00617 232 SAKKDGLVNIGGFLALRD--DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVEQVRYLGDRL 307 (431)
T ss_pred EeecCCCCccceEEEeCc--HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHH
Confidence 4544 57999986 57888877432 1111 22344444454446654222 233333444668899999
Q ss_pred ccCCCCcccCCCCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeC-CCcc-C-----------CCCeEEEEec
Q 015768 306 SPLGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIP-GGAC-G-----------CRGHLRISFG 365 (400)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~-g~~~-~-----------~~~~iRi~~~ 365 (400)
++.|. .+..|.+++++|++.+... .++.+++.+|+.+.||.+.. |... + ....+|+++.
T Consensus 308 ~~~G~-~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p 386 (431)
T cd00617 308 DEAGV-PIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP 386 (431)
T ss_pred HHCCC-CccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc
Confidence 99875 7777888999999976421 24788998999999999653 3311 0 1268999987
Q ss_pred c--CCHHHHHHHHHHHHHHHHHH
Q 015768 366 G--LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 366 ~--~~~~~~~~~~~~l~~~l~~~ 386 (400)
+ -|.+.++..++.|...+++-
T Consensus 387 rr~~t~~~~~~~~~~~~~~~~~~ 409 (431)
T cd00617 387 RRVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred ccccCHHHHHHHHHHHHHHHhhH
Confidence 6 78899999999888888764
No 138
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=9.6e-31 Score=248.08 Aligned_cols=337 Identities=16% Similarity=0.086 Sum_probs=240.4
Q ss_pred hcCCCeEEcCCCC--CCCCC-cHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHH
Q 015768 27 RGAKNAVSLAQGV--VYWQP-PKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~~-~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~ 100 (400)
.+|+.++||..+. +.++. +|++.+++.+.+.+... ..|.. ....++++++.+.++.+ ++++++++|+++
T Consensus 40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~-----~~~~~la~~l~~~~~~~~~~~v~~~~sgse 114 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFAT-----EPQIALAERLVELLGAPEGGRVFFCNSGAE 114 (398)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCC-----HHHHHHHHHHHHhCCCCCCCEEEEeCchHH
Confidence 4678899998874 45554 79999999998876321 23422 22346667776666643 579999999999
Q ss_pred HHHHHHHHhcCCC-CEEEEeCCCccchhHHHHh-cCcEEEEe--ccCCCCCC---CCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 101 AFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQM-TGVTHILV--GPCSSKTL---HPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 101 a~~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~-~g~~~~~~--~~~~~~~~---~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
|+..+++.+..+| +.|+..+++|+++...... .|...... .+...+-. ..|++.+++.+.++ +++|+++.+
T Consensus 115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~aviiep~ 192 (398)
T PRK03244 115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDD--TAAVFLEPI 192 (398)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCC--eEEEEEecc
Confidence 9999999877666 5778888899887644332 22111100 01100000 12788999888643 589999988
Q ss_pred CCCCccCCCH-HHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768 174 GNPSGTYIPE-RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250 (400)
Q Consensus 174 ~nptG~~~~~-~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~ 250 (400)
+||+|.+++. +++++|.++|++||+++|+||+|.++...+..... .....+ +.++||++| +|+|+|+++.+
T Consensus 193 ~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pD--i~t~sK~l~-~G~~ig~~~~~--- 266 (398)
T PRK03244 193 QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD--VVTLAKGLG-GGLPIGACLAF--- 266 (398)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCC--EEEEchhhh-CCcccEEEEEc---
Confidence 9999998865 45999999999999999999999876554432211 111122 347899998 89999999999
Q ss_pred HHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--CcccCCCCceEEEeeCCC
Q 015768 251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGGEGAIYLWARLPE 328 (400)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~~~~~~~ 328 (400)
+++++.+.......+++.+++.+.++.++|+...+ .+..++++++.+++++.|++++. +..... .++++++.++.
T Consensus 267 ~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~~~i~~~~ 343 (398)
T PRK03244 267 GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIAS--EGLLENAERLGEQLRAGIEALGHPLVDHVRG-RGLLLGIVLTA 343 (398)
T ss_pred HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhcCCCceeeEee-ccEEEEEEEec
Confidence 67888776555566788999999999999874211 24556677778888888887543 112223 47889998864
Q ss_pred CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
. ...++...+. ++||.+.+. .++.+|++++. .+++|+++++++|.+++++.
T Consensus 344 ~--~~~~~~~~l~-~~Gv~~~~~----~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 344 P--VAKAVEAAAR-EAGFLVNAV----APDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred c--HHHHHHHHHH-HCCeEEeec----CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 2 3567777775 789999874 25889999887 89999999999999999864
No 139
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=9.1e-30 Score=240.66 Aligned_cols=327 Identities=17% Similarity=0.110 Sum_probs=248.8
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p 121 (400)
..+++|++++.+.+. .| ...+..++.+++.+.+++.+|.++ +.+++++++|++++.++..+.++||+|+++++
T Consensus 19 ~~~~~V~~a~~~~~~-----~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~ 92 (401)
T PLN02409 19 NIPERVLRAMNRPNE-----DH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRI 92 (401)
T ss_pred CCCHHHHHHhcCCCC-----CC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCC
Confidence 356777777655432 22 345667899999999999999875 56788899999999999999999999999999
Q ss_pred Cccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 122 YYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 122 ~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
+|++. ...++..|++++.+ +.+.++ .++++.+++.+++. +.+++|++++++||||.++|.+++.++.+ |+++|
T Consensus 93 ~~~~~~~~~~~~~~g~~v~~v-~~~~~~-~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~g 169 (401)
T PLN02409 93 GQFSLLWIDQMQRLNFDVDVV-ESPWGQ-GADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQHP 169 (401)
T ss_pred CchhHHHHHHHHHcCCceEEE-ECCCCC-CCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhccC
Confidence 99765 46678889999999 776443 47899999999852 13699999999999999999444444444 99999
Q ss_pred CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc---------------
Q 015768 198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD--------------- 262 (400)
Q Consensus 198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~--------------- 262 (400)
+++++|++++. +..+......+.++++.|.+|+++. +.++||++.+ ++..+++.....
T Consensus 170 ~~~vvD~v~s~---g~~~id~~~~~~D~~~~s~~K~l~~-P~G~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (401)
T PLN02409 170 ALLLVDGVSSI---GALDFRMDEWGVDVALTGSQKALSL-PTGLGIVCAS---PKALEASKTAKSPRVFFDWADYLKFYK 242 (401)
T ss_pred cEEEEEccccc---CCccccccccCccEEEEcCccccCc-CCCcceeEEC---HHHHHHHhcCCCCCeecCHHHHHHHHh
Confidence 99999999883 2333333445677999999999963 3469999988 677776653210
Q ss_pred ---cCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCCCCCHH
Q 015768 263 ---NIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKHLDDF 334 (400)
Q Consensus 263 ---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 334 (400)
...++++...+.++..+++.. +...+++.++++++++++++.|++++. ++..+. +...+++.+|.. .+..
T Consensus 243 ~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~-~~~~~~~~~~s~~v~~~~~p~~-~~~~ 320 (401)
T PLN02409 243 LGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGL-KLCTKKPEWRSDTVTAVVVPEG-IDSA 320 (401)
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCChhhcccceEEEeCCCC-CCHH
Confidence 114467777788888877742 234677888899999999999988764 444321 234566777754 3677
Q ss_pred HHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 335 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
++...+.+++||.+.+|........+||+... ++.+++..++.+|.+++.++-
T Consensus 321 ~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 321 EIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred HHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 88888888999999998865567899999776 999999999999999998754
No 140
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.98 E-value=1.3e-29 Score=237.47 Aligned_cols=318 Identities=17% Similarity=0.196 Sum_probs=221.0
Q ss_pred CcHHHHHHHHHhhcCCCCCCCC---CCC----CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEE
Q 015768 44 PPKMAMEKVKELVWDPSISKYG---ADE----GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSV 116 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~---~~~----g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~v 116 (400)
.+..+.+++.++........+. ... ....+++.+++++ |.+ .+.+++|+++++..++.++.++||.|
T Consensus 20 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~----g~~--~~~i~~g~~~a~~~~~~~l~~~gd~V 93 (370)
T TIGR02539 20 LTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFL----GMD--EARVTHGAREGKFAVMHALCKEGDWV 93 (370)
T ss_pred CcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHh----CCC--ceEEECChHHHHHHHHHHhhCCCCEE
Confidence 4566677776664422111110 111 1334455555554 654 56778999999999999999999999
Q ss_pred EEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 117 VMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 117 lv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~-----~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
+++.+.|++....++..|++++.+ |.++ .++.+|++++++.+.+. ..+++|++++|+||+|...+ +++|.
T Consensus 94 l~~~~~h~s~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~ 169 (370)
T TIGR02539 94 VLDGLAHYTSYVAAERAGLNVKEV-PHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVA 169 (370)
T ss_pred EECCcccHHHHHHHHHcCCEEEEE-ecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHH
Confidence 999999888888889999999999 7653 34678999999998631 13589999999999999999 88889
Q ss_pred HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc----
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI---- 266 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~---- 266 (400)
++|+++|+++|+|++|+.+.. +......+.+++++|+||+++ +|.|+||++++ +++++.+......+.+
T Consensus 170 ~la~~~~~~livDea~~~g~~---~~~~~~~~~di~v~s~sK~~~-~~g~~G~l~~~---~~~i~~l~~~~~~~~~~~~~ 242 (370)
T TIGR02539 170 KVCREKGVPLLLNCAYTVGRM---PVSAKEIGADFIVGSGHKSMA-ASGPCGVLGMS---EEWEDIVLRKSRYSPVKEVE 242 (370)
T ss_pred HHHHHcCCeEEEECccccCCc---CCCHHHcCCCEEEeeCccccc-CCCCEEEEEEC---HHHHhhhcccccCCccceee
Confidence 999999999999999996422 111222346688899999998 56789999998 7888888765542222
Q ss_pred ----CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc--cCCCCceEEEeeCCCCC-------CCH
Q 015768 267 ----CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KGGEGAIYLWARLPEKH-------LDD 333 (400)
Q Consensus 267 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~ 333 (400)
+.......++..++....+++..+.+ ..++++++++.|++++. .+ ..+..++|++++++... .+.
T Consensus 243 ~~~~~~~~~~~~~~~~al~~~~~~l~~~~~-~~~~~~~l~~~L~~~g~-~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~ 320 (370)
T TIGR02539 243 LLGCTSRGAPIVTMMASFPHVVERVKRWDE-EVKKTRWFVAELEDIGF-IQLGQKPKEHDLVKFETPGFHEIAQKHKRRG 320 (370)
T ss_pred eecccccccHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCc-EEEccCCCcCceEEEECCchhHHhhhhcccc
Confidence 11112444444455432233333333 34445689999999875 43 23445888888876310 123
Q ss_pred HHHHHHHHHhcCeE-EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVV-VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 334 ~~~~~~l~~~~gi~-v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
..+.+.|. ++||. ++++ .++++|+++...++++++++++.|++++++
T Consensus 321 ~~~~~~L~-e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 321 YFLYEELK-KRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHHH-hCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 35676664 78997 6543 356999996335899999999999988765
No 141
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.98 E-value=8.6e-30 Score=240.19 Aligned_cols=330 Identities=14% Similarity=0.119 Sum_probs=235.6
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEE
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAGDSV 116 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~---~~gd~v 116 (400)
++|++|++++.+.+.......+... ....+..+++.+.+++.+|+++++|++|+|+|++++.++.++. .+|++|
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~v 89 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHI 89 (379)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeE
Confidence 4578999999888764211111111 1113345556666777779888999999999999999998864 456899
Q ss_pred EEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015768 117 VMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC 193 (400)
Q Consensus 117 lv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~ 193 (400)
+++..+|+++... ++..|++++.+ |.++++ .+|++++++.+++++ +++++++++||||.++| +++|.++|
T Consensus 90 v~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~g-~~~~~~l~~~i~~~~--~lv~i~~~~n~tG~~~~---~~~I~~l~ 162 (379)
T TIGR03402 90 ITTAVEHPAVLSLCQHLEKQGYKVTYL-PVDEEG-RLDLEELRAAITDDT--ALVSVMWANNETGTIFP---IEEIGEIA 162 (379)
T ss_pred EEcccccHHHHHHHHHHHHcCCEEEEE-ccCCCC-cCCHHHHHHhcCCCc--EEEEEEcccCCeeeccc---HHHHHHHH
Confidence 9999999876643 44569999999 876554 689999999998765 99999999999999999 78899999
Q ss_pred HHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH---hhccCCcCccH
Q 015768 194 KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK---VQDNIPICASI 270 (400)
Q Consensus 194 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~---~~~~~~~~~~~ 270 (400)
+++|+++++|++++.. ..+......+.++++.|.+|.+|.+| +|+++.+... .+...+.. .......+++.
T Consensus 163 ~~~g~~vivD~~~~~g---~~~~~~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~~-~~~p~~~g~~~~~~~~~gt~~~ 236 (379)
T TIGR03402 163 KERGALFHTDAVQAVG---KIPIDLKEMNIDMLSLSGHKLHGPKG--VGALYIRKGT-RFRPLLRGGHQERGRRAGTENV 236 (379)
T ss_pred HHcCCEEEEECccccc---ccccCcccCCCCEEEEcHHHcCCCCc--eEEEEECCCC-CCCCcccCCccCCCcCCCCccH
Confidence 9999999999999842 23333334567788999999666445 6777666321 11000100 00112446677
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCC---ceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768 271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAHRHGV 346 (400)
Q Consensus 271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~gi 346 (400)
+...++..+++...++.++..++++++++++++.|++ ++.+.+.++.. ...+.+.++. .+.+++...| +++||
T Consensus 237 ~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~gI 313 (379)
T TIGR03402 237 PGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEY--IEGEAILLLL-DMEGI 313 (379)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecC--CCHHHHHHhh-ccCCE
Confidence 7777777777754566777778888899999999885 66655544321 1122222232 2567888766 58899
Q ss_pred EEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 347 VVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 347 ~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+.+|..|.. ++.+|+|++. +|++|++++++.|+++++++.+
T Consensus 314 ~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 314 CASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred EEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999987732 3689999999 9999999999999999987654
No 142
>PLN02483 serine palmitoyltransferase
Probab=99.98 E-value=2.9e-29 Score=241.34 Aligned_cols=334 Identities=16% Similarity=0.162 Sum_probs=233.0
Q ss_pred CCCeEEcCCCC-CCCC-CcH----HHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768 29 AKNAVSLAQGV-VYWQ-PPK----MAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (400)
Q Consensus 29 ~~~~i~~~~~~-~~~~-~~~----~v~~a~~~~~~~--~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~ 100 (400)
+++.++|++.+ ..+. +++ .+.+++.+.-.. .....|+......++++.+|+++ | .++.+++++ ++.
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~----g-~~~ai~~~~-G~~ 172 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFV----G-KPAAIVFGM-GYA 172 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHh----C-CCcEEEECC-HHH
Confidence 56789998865 6664 334 444444443222 11223555666777888888877 5 345666655 567
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-------cC---CCCeEEEE
Q 015768 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-------TK---PTPKLVSV 170 (400)
Q Consensus 101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-------~~---~~~~~v~l 170 (400)
++..++.++.++||.|++++++|+++...++..|++++.+ +.+ |.+++++.++ ++ +..+++++
T Consensus 173 an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~-~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~liv 245 (489)
T PLN02483 173 TNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVF-QHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVI 245 (489)
T ss_pred HHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEE-eCC------CHHHHHHHHHhhhhccccccccCCceEEEE
Confidence 7778888899999999999999999999999999999988 643 4555655543 11 11255555
Q ss_pred e-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--C---cccc-CCCcEEEEeccccccCCCcceeEE
Q 015768 171 V-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--K---HCCV-EGDHVVNLFSFSKAYGMMGWRVGY 243 (400)
Q Consensus 171 ~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~---~~~~-~~~~~i~~~s~sK~~g~~g~~~G~ 243 (400)
+ ...|++|.+.+ +++|.++|++||+++|+||+|+.+..+.. . .... ..+.+++++|+||++|+.| ||
T Consensus 246 ve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~ 319 (489)
T PLN02483 246 VEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GY 319 (489)
T ss_pred ECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eE
Confidence 5 45799999999 99999999999999999999985433211 1 1111 2357899999999998666 99
Q ss_pred EEccCCcHHHHHHHHHhhccC--CcCccHHHHHHHHHHhc-----CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768 244 IAYPSEVEGFATQLLKVQDNI--PICASIISQHLALYSLQ-----TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 316 (400)
Q Consensus 244 i~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 316 (400)
++++ +++++.+....... ..+.+++...++..+|+ .+.+...+++++++++++.+++.|++++. .+.++
T Consensus 320 i~~~---~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~-~v~~~ 395 (489)
T PLN02483 320 IAGS---KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGF-EVLGD 395 (489)
T ss_pred EEcC---HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCC-cccCC
Confidence 9988 88999888754322 22234444444455553 12234456678899999999999999865 56555
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.++..+++.+.... +..++..+|+ ++||.+.+..++. ..+.+||+++. ++++++++++++|+++++.+.
T Consensus 396 ~~sp~~~l~l~~~~-~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 396 NDSPVMPIMLYNPA-KIPAFSRECL-KQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred CCCCEEEEEECCHH-HHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 54566665544321 3557888887 6899999743322 23689999987 899999999999999988764
No 143
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=2.6e-29 Score=238.70 Aligned_cols=330 Identities=18% Similarity=0.159 Sum_probs=233.3
Q ss_pred cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCC-----CCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768 28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSI-----SKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (400)
Q Consensus 28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~-----~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~ 100 (400)
.++.+++|++.+ .++..+|++++++.+.+.+... ..+. ......++++.+++++ |. +.+++++|+++
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~----g~--~~~~~~~sG~~ 125 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT----GF--ESCLLCQSGWA 125 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh----CC--CcEEEECCHHH
Confidence 457789998865 8888899999999998865211 1111 1112344555555544 64 46788999999
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~ 180 (400)
|+..++.++..+||.|++..++|.+....++..|++++.+ +. .|++++++.+++.+ +++|++++++||+|.+
T Consensus 126 An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~-~~lV~v~~v~n~tG~i 197 (407)
T PRK07179 126 ANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPF-RH------NDVDHLRRQIERHG-PGIIVVDSVYSTTGTI 197 (407)
T ss_pred HHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEe-cC------CCHHHHHHHHHhcC-CeEEEECCCCCCCCcc
Confidence 9999999999999999999999999988888889887766 32 38899999887532 4888888999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--cc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--HC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
.| +++|.++|+++|+++|+||+|+.+..+... .. ......++++.|+||++| .|+|+++++ +++++
T Consensus 198 ~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~---~~~~~ 268 (407)
T PRK07179 198 AP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCP---RELAE 268 (407)
T ss_pred cc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeC---HHHHH
Confidence 99 888999999999999999999854433221 11 111234688999999996 258999988 67777
Q ss_pred HHHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768 256 QLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333 (400)
Q Consensus 256 ~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (400)
.+...... .+.+.++....++.++++.. +...+.+++++++++++++.|++++. .+. .. +.++++.++... +.
T Consensus 269 ~~~~~~~~~~~~~t~~~~~~aa~~aal~~~-~~~~~~~~~l~~~~~~l~~~L~~~g~-~v~-~~-~~i~~l~~~~~~-~~ 343 (407)
T PRK07179 269 YVPFVSYPAIFSSTLLPHEIAGLEATLEVI-ESADDRRARLHANARFLREGLSELGY-NIR-SE-SQIIALETGSER-NT 343 (407)
T ss_pred HHHHhCcCeeeCCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-CCC-CC-CCEEEEEeCCHH-HH
Confidence 66543321 22333344444444445431 22345678889999999999998854 444 33 567777765321 24
Q ss_pred HHHHHHHHHhcCeEEeCCCcc---CCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
..+...| .++||.+..-... ..++.+||+++. +|++|++++++.|++++.+.
T Consensus 344 ~~~~~~L-~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 344 EVLRDAL-EERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred HHHHHHH-HHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 5566655 4789984311111 135799999997 89999999999999988765
No 144
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.98 E-value=3.1e-29 Score=238.42 Aligned_cols=336 Identities=16% Similarity=0.112 Sum_probs=236.5
Q ss_pred CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
++++++|++++ ..++.+|++++++.+.+.+...+..+ ...+.......+++.+++.+|. +..+++++|++++..+
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~--~~~~~~~sG~~an~~a 122 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK--EAALVFTSGYVSNDAT 122 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC--CcEEEECcHHHHHHHH
Confidence 47899998876 78888999999999888764221100 1112344444555555555563 3455556667898888
Q ss_pred HHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCCccCC
Q 015768 106 VLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 106 ~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~nptG~~~ 181 (400)
+..+.. +++.|+.....|.+....++..++++..+ +. .|++++++.++.. ..+++|++++++|++|.+.
T Consensus 123 i~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~-~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~ 195 (407)
T PRK09064 123 LSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIF-RH------NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA 195 (407)
T ss_pred HHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEE-CC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc
Confidence 887764 77777777777777777777788776666 43 2678888877621 2358999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCC--CCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
+ +++|.++|++||+++|+||+|+.+.++. .... ......+++++|+||++|+.| ||++++ +++++.
T Consensus 196 ~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~---~~~~~~ 266 (407)
T PRK09064 196 P---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS---AALVDA 266 (407)
T ss_pred C---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC---HHHHHH
Confidence 9 8999999999999999999998443332 1111 111245788999999998766 999888 788887
Q ss_pred HHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768 257 LLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 257 l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (400)
+....... +.+.++..+.++..+++...+ ....++++.++++++.+.|++++. .+..+. +.++.+.++.. ....
T Consensus 267 l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~iv~i~~~~~-~~~~ 342 (407)
T PRK09064 267 VRSYAPGFIFTTSLPPAIAAAALASIRHLKE-SNEERERHQERAAKLKAALDAAGI-PVMPNE-SHIVPVMVGDP-EKCK 342 (407)
T ss_pred HHHhCccccccCcCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-CCCCCC-CCEEEEEeCCH-HHHH
Confidence 76544322 344566677777777764222 134457788889999999998764 555554 56666666531 1356
Q ss_pred HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
++..+|++++||.+.+...+. +.+++||+++. ++++|++.+++.|+++++++
T Consensus 343 ~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 343 KASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred HHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 788888766799998765443 23689999987 89999999999999998765
No 145
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.98 E-value=2.2e-29 Score=235.96 Aligned_cols=301 Identities=15% Similarity=0.140 Sum_probs=224.8
Q ss_pred CcHHHHHHHHHHHHhhcCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCC
Q 015768 69 GLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCS 144 (400)
Q Consensus 69 g~~~~~~~~a~~l~~~~~~~~--~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~ 144 (400)
....+.+.+.+.+++.+|+++ +.|++|+|+|++++.++.++..+||.+++..+++++. ...++..|++++.+ +.+
T Consensus 32 ~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v-~~~ 110 (363)
T TIGR02326 32 DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVV-DTG 110 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEE-eCC
Confidence 345566666677777778875 3799999999999999999988888887776666555 36678889999988 876
Q ss_pred CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV 224 (400)
Q Consensus 145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 224 (400)
+++ .+|++.+++.++.++..+++.+++++||||.++| +++|.++|++||+++++|++++. +..+......+.+
T Consensus 111 ~~~-~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~---g~~~~~~~~~~~D 183 (363)
T TIGR02326 111 EVE-PPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF---GGIPIDIAELHID 183 (363)
T ss_pred CCC-CCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc---cCcccchhhcCcc
Confidence 544 6799999999986554678888999999999999 89999999999999999998873 3333333445677
Q ss_pred EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh------------------hccCCcCccHHHHHHHHHHhcCCc-H
Q 015768 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV------------------QDNIPICASIISQHLALYSLQTGP-E 285 (400)
Q Consensus 225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~------------------~~~~~~~~~~~~~~~~~~~l~~~~-~ 285 (400)
++++|++|+++ ++.++|+++.+ ++..+++... .....++++.+.+.++..+++... +
T Consensus 184 ~~~~s~~K~l~-~p~G~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~ 259 (363)
T TIGR02326 184 YLISSANKCIQ-GVPGFGFVIAR---QAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKE 259 (363)
T ss_pred EEEecCccccc-cCCcceEEEEC---HHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 99999999984 33347999988 5665554311 011245677788888777775421 2
Q ss_pred -HHHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeE
Q 015768 286 -WVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHL 360 (400)
Q Consensus 286 -~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 360 (400)
..++..+++.++++++++.|++++. ....+ .++...++.++.. ..+..++...|. ++||.+.+|..+ ..+++
T Consensus 260 g~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~-~~gi~v~~g~~~-~~~~i 336 (363)
T TIGR02326 260 GGVAARHQRYQQNQKTLVAGMRALGF-EPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLK-EQGFVIYPGKVS-QVDCF 336 (363)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCC-eeccCcccCCceEEEEECCCCCCCCHHHHHHHHH-HCCEEEECCcCC-CCCEE
Confidence 2566778899999999999988865 33322 3345667777753 135677887774 789999998765 35799
Q ss_pred EEEe-ccCCHHHHHHHHHHHHHHHH
Q 015768 361 RISF-GGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 361 Ri~~-~~~~~~~~~~~~~~l~~~l~ 384 (400)
|+++ +.++.++++.+++.|++++.
T Consensus 337 Ri~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 337 RIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EEecCCCCCHHHHHHHHHHHHHHhC
Confidence 9996 44899999999999988753
No 146
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.98 E-value=3.8e-30 Score=245.72 Aligned_cols=342 Identities=17% Similarity=0.171 Sum_probs=242.5
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|++++||..+. ..++ .+|++++++.+.+... ..|....+..+...++++.+.+.++.+.+++++++|+++|+.
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~ 110 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVE 110 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence 4688999999873 4565 8899999999998653 233332235667778888888777777899999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHHhcC-------------cEEEEeccCCCC-----CCCCCHHHHHHhhccC-
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSK-----TLHPDADWLEKTLETK- 162 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~-----~~~~~~e~l~~~l~~~- 162 (400)
.+++.+. .++++|++.+++|++........+ .+++.+ |.++. .+..|++.+++.++..
T Consensus 111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~ 189 (413)
T cd00610 111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHV-PYPYRYRPPAELADDLEALEEALEEHP 189 (413)
T ss_pred HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEe-CCCccccchhhHHHHHHHHHHHHhcCC
Confidence 9999884 578999999999999765443321 134555 54421 1234788999888752
Q ss_pred CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee
Q 015768 163 PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV 241 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~ 241 (400)
..+++++++..++++|.+. +.+++++|.++|++||+++|+||+|..+...+........+....+.|+||+++ +|+|+
T Consensus 190 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~-~g~~~ 268 (413)
T cd00610 190 EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLG-GGLPL 268 (413)
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEccccc-Ccccc
Confidence 2246666665577889865 777899999999999999999999987643332211111111222458899998 58999
Q ss_pred EEEEccCCcHHHHHHH--HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC----CcccC
Q 015768 242 GYIAYPSEVEGFATQL--LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE----GAVKG 315 (400)
Q Consensus 242 G~i~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~ 315 (400)
||++.+ +++++.+ .......+++.+++.+.++.++++...+ .+..+++.++.+++++.|+.+.. .....
T Consensus 269 g~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 343 (413)
T cd00610 269 GAVLGR---EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRELAEKHPLVGDVR 343 (413)
T ss_pred EEEEEc---HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEee
Confidence 999988 7888876 3334445777888888888877764211 34566677777777777776422 11122
Q ss_pred CCCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+ .+.++++.++... .....+...|. ++||.+.|+. ++.+|++++. ++++++++++++|.+++
T Consensus 344 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 344 G-RGLMIGIELVKDRATKPPDKELAAKIIKAAL-ERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred c-CceEEEEEEecCCCcCCcchHHHHHHHHHHH-HCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 3 3677787776431 13566777775 7899999875 6789999887 79999999999998764
No 147
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.98 E-value=2.3e-29 Score=235.51 Aligned_cols=322 Identities=17% Similarity=0.157 Sum_probs=223.9
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCC---CCCC----CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCC
Q 015768 40 VYWQPPKMAMEKVKELVWDPSIS---KYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA 112 (400)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~ 112 (400)
++-+..+++++++.++....... .... .+...++++.+++++ |+ +++++++|+++++..++.++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL----GM--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc----CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 34456789999999888432111 1111 122345555555554 76 78999999999999999999999
Q ss_pred CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCC-CCCCHHHHHHhhccC-----CCCeEEEEeCCCCCCccCCCHHHH
Q 015768 113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETK-----PTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 113 gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~e~l~~~l~~~-----~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
||+|+++.++|++....++..|++++.+ +.+.++ +.+|++.+++.+++. ..+++|++++|+||+|.+.+ +
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~ 158 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREV-PNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---A 158 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEE-ecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---H
Confidence 9999999999999888889999999999 877653 678999999988631 23599999999999999988 8
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC-
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP- 265 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~- 265 (400)
++|.++|+++|+++|+|++|+... .+......+.+++++|+||+++ ++.|+||++.+ +++++++......+.
T Consensus 159 ~~i~~~~~~~~~~vivD~a~~~g~---~~~~~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~---~~~~~~l~~~~~~~~~ 231 (361)
T cd06452 159 KKIAKVCHEYGVPLLLNGAYTVGR---MPVSGKELGADFIVGSGHKSMA-ASAPIGVLATT---EEWADIVFRTSQMFKI 231 (361)
T ss_pred HHHHHHHHHcCCeEEEECCcccCC---cCCCHHHcCCCEEEecCCcccc-CCCCeEEEEEC---HHHHHHHhcccccccc
Confidence 899999999999999999998432 1222333456799999999997 56699999998 788888765443211
Q ss_pred -------cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--CCCceEEEeeCCCC-------
Q 015768 266 -------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLPEK------- 329 (400)
Q Consensus 266 -------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~~~------- 329 (400)
.+.+.....++..++....++. +...+..++++++++.|++++++++.. +...+++.++.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~ 310 (361)
T cd06452 232 KEVELLGCTLRGAPLVTLMASFPHVKERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKH 310 (361)
T ss_pred ceeeeeccccCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhc
Confidence 1111122333333443212223 233333445688999999985555542 23356776776521
Q ss_pred CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 330 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
..++.++..+|. ++||.+.. .+...++|++....++++++.+++.|+++.
T Consensus 311 ~~~~~~~~~~L~-~~gI~~~~---~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 311 KRRGYFLYSELK-KRGIHGIK---PGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred cccchhHHHHHH-HcCceEEc---CCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 112346888885 67999532 234568999973358999999999887653
No 148
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.98 E-value=1.1e-29 Score=239.77 Aligned_cols=332 Identities=15% Similarity=0.167 Sum_probs=237.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.+++|..+. +.++ .+|.+.+++.+.+.+..... .....+...++++.+.+.+|. +++++++|+++++.
T Consensus 24 ~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~g~--~~~~~~~sg~~a~~ 98 (379)
T TIGR00707 24 VNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVS---NLYYTEPQEELAEKLVEHSGA--DRVFFCNSGAEANE 98 (379)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc---cccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHH
Confidence 5678899999873 4554 56899999999887642111 111234566777777777775 49999999999999
Q ss_pred HHHHHhc---C----CCCEEEEeCCCccchhHHHHhcCcEEEE----eccCCCC-CCC--CCHHHHHHhhccCCCCeEEE
Q 015768 104 NIVLTLC---D----AGDSVVMFAPYYFNSYMSFQMTGVTHIL----VGPCSSK-TLH--PDADWLEKTLETKPTPKLVS 169 (400)
Q Consensus 104 ~~~~~l~---~----~gd~vlv~~p~~~~~~~~~~~~g~~~~~----~~~~~~~-~~~--~~~e~l~~~l~~~~~~~~v~ 169 (400)
.+++++. . +||+|++++|+|+++...+...+..... . +...+ .+. .|++.+++.+.+++ ++|+
T Consensus 99 ~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~~~~~~--~~v~ 175 (379)
T TIGR00707 99 AALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFE-PLVPGFSYAPYNDIESLKKAIDDET--AAVI 175 (379)
T ss_pred HHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCC-CCCCCceeeCCCCHHHHHHHhhhCe--eEEE
Confidence 9998763 2 3799999999999887666555443211 1 22221 111 17899999887654 8998
Q ss_pred EeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEc
Q 015768 170 VVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAY 246 (400)
Q Consensus 170 l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~ 246 (400)
+++++|++|.. ++.+++++|.++|+++|+++|+||+|.++...+.... ......++ .++||.++ +|+|+||++.
T Consensus 176 ~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~--~t~sK~~~-~G~riG~~~~ 252 (379)
T TIGR00707 176 VEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDI--ITLAKGLG-GGVPIGATLA 252 (379)
T ss_pred EEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCE--EEEccccc-CCcccEEEEE
Confidence 87667788864 7899999999999999999999999987755442211 11111223 36899998 9999999999
Q ss_pred cCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC---CcccCCCCceEEE
Q 015768 247 PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE---GAVKGGEGAIYLW 323 (400)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~ 323 (400)
+ +++++.+.......+++.+++.+.++.++|+... ..++.++++++++.+++.|+++.. .....+ .++++|
T Consensus 253 ~---~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~~ 326 (379)
T TIGR00707 253 K---EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE--KERLLENVKEKGDYFKERLEELGKNYPNKEVRG-KGLMLG 326 (379)
T ss_pred c---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcccc-CceEEE
Confidence 8 7888888765555677789999999998887421 134556677777777777765422 111222 478888
Q ss_pred eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+.++. +..++.+.|. ++||.+.|+. .+++|++++. .+++++++++++|++++
T Consensus 327 ~~~~~---~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 327 IELEA---PCKDIVKKAL-EKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred EEecC---cHHHHHHHHH-HCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 88864 3567787765 8999999853 5899999876 79999999999998763
No 149
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=1.2e-29 Score=239.10 Aligned_cols=333 Identities=15% Similarity=0.113 Sum_probs=232.1
Q ss_pred EcCCCCCCCCCcHHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHH
Q 015768 34 SLAQGVVYWQPPKMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 34 ~~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~ 108 (400)
.|+.+.+++++|+.+++++.+.+.... ...|..........+.+.+.+++.+|.+ .++|++++|+|++++.++.+
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~ 81 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG 81 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence 466676777788999999988876532 1123211111233334444444444765 45899999999999999999
Q ss_pred hcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
+.++||+|++..++|+++... .+..|.+++.+ +.+++ +.+|++++++.+++++ +++++++|+||||.++|
T Consensus 82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~~--~~v~~~~~~n~tG~~~~-- 155 (376)
T TIGR01977 82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIV-KCDNE-GLISPERIKRAIKTNT--KLIVVSHASNVTGTILP-- 155 (376)
T ss_pred ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEE-ecCCC-CCcCHHHHHHhcCCCC--eEEEEECCCCCccccCC--
Confidence 999999999999999886543 34559999988 77654 4679999999997655 99999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh----
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV---- 260 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~---- 260 (400)
+++|.++|+++|+++|+|++++.+.. +......+.++++.|++|+++.| ...|.++.++. ..++.+...
T Consensus 156 -~~~i~~l~~~~~~~livD~a~~~g~~---~~~~~~~~~D~~~~s~~K~l~~p-~g~g~l~~~~~--~~~~~~~~~~~~~ 228 (376)
T TIGR01977 156 -IEEIGELAQENGIFFILDAAQTAGVI---PIDMTELAIDMLAFTGHKGLLGP-QGTGGLYIREG--IKLKPLKSGGTGS 228 (376)
T ss_pred -HHHHHHHHHHcCCEEEEEhhhccCcc---CCCchhcCCCEEEecccccccCC-CCceEEEEcCC--cCcCceecCCCcc
Confidence 78889999999999999999985432 22223356789999999998533 23566554532 111111100
Q ss_pred ------------hccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEE
Q 015768 261 ------------QDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLW 323 (400)
Q Consensus 261 ------------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~ 323 (400)
.+....+++.....++..+++.-. ...+.+.+++..+.+++++.|++.+++++..+. ....++
T Consensus 229 ~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~ 308 (376)
T TIGR01977 229 HSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVS 308 (376)
T ss_pred ccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEE
Confidence 001122455555566555665311 224567778888999999999887765555431 245666
Q ss_pred eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----------CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------CRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----------~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+.++. .+..++..+|.+++||.+..|..|. ..+.+|++++. +|++|++.++++|++
T Consensus 309 ~~~~~--~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 309 FTVEG--IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEECC--CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 67653 3677888888644599999887653 35789999988 999999999999875
No 150
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=8.1e-29 Score=235.17 Aligned_cols=336 Identities=14% Similarity=0.092 Sum_probs=238.0
Q ss_pred CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCC--CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISK--YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~--y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
++++++|++++ ..+..+|+|++++.+++.+...+. .....+.....+.+++.+++..|. +..++++++++|+..+
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~--~~~~~~~SG~~An~~a 121 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK--EAALLFTSGYVSNWAA 121 (406)
T ss_pred CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC--CcEEEeCCcHHHHHHH
Confidence 46789998875 777789999999999987642211 111123334455555666555563 5666666677899999
Q ss_pred HHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCC
Q 015768 106 VLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 106 ~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~ 181 (400)
+..+.. +||.|+.....|.+....++..|.+++.+ +. .|++.+++.++. ...+++|++++++|++|.+.
T Consensus 122 i~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~ 194 (406)
T PRK13393 122 LSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIF-RH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA 194 (406)
T ss_pred HHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEe-CC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh
Confidence 998765 78888887888888888888888887777 53 266777777652 12358899999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCC--Cc---cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~---~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
| +++|.++|++||+++|+||+|+.+.++.. .. .......+++++|+||++|++| ||++++ +++++.
T Consensus 195 ~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~---~~~~~~ 265 (406)
T PRK13393 195 P---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS---AALCDF 265 (406)
T ss_pred C---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC---HHHHHH
Confidence 9 89999999999999999999985444321 11 1112234788899999998777 999887 788887
Q ss_pred HHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768 257 LLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 257 l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (400)
+...... .+.+.+++.+.++.++|+...+. ...+.+++++.+++++.|++++. .+..+. +.++.+.++.. .+..
T Consensus 266 l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~-~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~i~~v~~~~~-~~~~ 341 (406)
T PRK13393 266 IRSFASGFIFTTSLPPAVAAGALASVRHLKAS-SAERERHQDRVARLRARLDKAGI-PHLPNP-SHIVPVMVGDP-VLCK 341 (406)
T ss_pred HHHhCcCceecCccCHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCeEEEEeCCH-HHHH
Confidence 7765443 24456777777777777742222 23345667888899999988754 445555 44555555421 1346
Q ss_pred HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
++..+|++++||.+.++.++. +.+++||+++. ++++|+++++++|++++.++
T Consensus 342 ~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 342 QISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred HHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 788878755799998865443 23689999987 89999999999999998765
No 151
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=1.7e-29 Score=237.81 Aligned_cols=319 Identities=19% Similarity=0.151 Sum_probs=227.6
Q ss_pred CCcHHHHHHHHHhhcCCCCC----CCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcC---CCC
Q 015768 43 QPPKMAMEKVKELVWDPSIS----KYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCD---AGD 114 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~----~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~---~gd 114 (400)
++|+.+++++.+.+...... .+..........+++.+.+++.+|.+ ++++++++|+|++++.++.++.. +||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~ 89 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGD 89 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCC
Confidence 35688999988887542211 11111122333344445555555877 78999999999999999999987 899
Q ss_pred EEEEeCCCccchh----HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 115 SVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 115 ~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
+|++++++|++.. ...+..|++++.+ +.+.+ +.+|++++++.+.+++ ++|++++++||||.+.| +++|.
T Consensus 90 ~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~--~~v~~~~~~~~tG~~~~---~~~i~ 162 (373)
T cd06453 90 EIVTSVMEHHSNIVPWQQLAERTGAKLKVV-PVDDD-GQLDLEALEKLLTERT--KLVAVTHVSNVLGTINP---VKEIG 162 (373)
T ss_pred EEEECcchhHHHHHHHHHHHhhcCcEEEEe-ecCCC-CCcCHHHHHHHhcCCc--eEEEEeCcccccCCcCC---HHHHH
Confidence 9999999998853 3345679999999 87744 4689999999998754 99999999999999999 88999
Q ss_pred HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-------
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------- 263 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~------- 263 (400)
++|++||+++++|++++.+.. +......+.+++++|++|+++. .++|+++.+ +++++++......
T Consensus 163 ~~~~~~~~~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~~~--~g~g~~~~~---~~~~~~~~~~~~g~~~~~~~ 234 (373)
T cd06453 163 EIAHEAGVPVLVDGAQSAGHM---PVDVQDLGCDFLAFSGHKMLGP--TGIGVLYGK---EELLEEMPPYGGGGEMIEEV 234 (373)
T ss_pred HHHHHcCCEEEEEhhhhcCce---eeeccccCCCEEEeccccccCC--CCcEEEEEc---hHHhhcCCCeecCCCccccc
Confidence 999999999999999874332 1222233566888899999973 568999888 6776666543211
Q ss_pred --------------CCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC--CceEEEeeC
Q 015768 264 --------------IPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARL 326 (400)
Q Consensus 264 --------------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~ 326 (400)
...+++.....++..+++.. ....+++.++..++++++.+.|++++++.+..+. .+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (373)
T cd06453 235 SFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNL 314 (373)
T ss_pred cccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEE
Confidence 01234444444444444421 1224677788888899999999988765554321 245667777
Q ss_pred CCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 327 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 327 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
+. .+..++.++|. ++||.+.+|..|. .++++|++++. +|++|++++++.|
T Consensus 315 ~~--~~~~~i~~~l~-~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 315 EG--IHPHDVATILD-QYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CC--cCHHHHHHHHH-HCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 54 35678888775 7999998877542 36799999997 8999999988764
No 152
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.97 E-value=9e-29 Score=231.55 Aligned_cols=318 Identities=16% Similarity=0.161 Sum_probs=228.9
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC--cEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~--~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~ 120 (400)
.+++.+++++...... + .....+..+.+.+.+++.+|++++ .+++++|+|+++..++.++.++||++++..
T Consensus 9 ~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~ 81 (355)
T TIGR03301 9 STSATVRDAMLVDWCH-----W--DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLI 81 (355)
T ss_pred CCCHHHHHHhhhhccC-----C--CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEEC
Confidence 3567777777663221 1 112235556666666666688754 678899999999999999998888877776
Q ss_pred CCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768 121 PYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (400)
Q Consensus 121 p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (400)
+.+++. ...++..|.+++.+ +.+++ +.+|++++++.++.++..+++++++++|++|...| +++|.++|++||+
T Consensus 82 ~~~~~~~~~~~a~~~g~~~~~i-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~ 156 (355)
T TIGR03301 82 NGAYGERLAKICEYLGIPHTDL-NFSEY-EPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHGA 156 (355)
T ss_pred CCchhhHHHHHHHHcCCceEEE-ecCCC-CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcCC
Confidence 666553 45677889999988 77543 46799999999976554578888899999999999 8999999999999
Q ss_pred EEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-----------------
Q 015768 199 WLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----------------- 261 (400)
Q Consensus 199 ~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----------------- 261 (400)
++|+|++++.+ ..+......+.+++++|++|+++ ++.++||++.+ +++++.+....
T Consensus 157 ~livD~~~s~g---~~~~~~~~~~~d~~~~s~~K~l~-~~~G~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (355)
T TIGR03301 157 VLIVDAMSSFG---AIPIDIEELDVDALIASANKCLE-GVPGFGFVIAR---RDLLEASAGNARSLYLDLYDQWAYMEKT 229 (355)
T ss_pred EEEEEeccccC---CcccchhhcCccEEEecCCcccc-cCCceeEEEEC---HHHHHHhhCCCCCceeeHHHHHHHhhhc
Confidence 99999987743 22333334467789999999974 23347999998 67777665210
Q ss_pred ccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEEEeeCCCCC-CCHHH
Q 015768 262 DNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEKH-LDDFE 335 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~ 335 (400)
....++++.+.+.++..+++... ...++..++++++++++++.|++++. .+..+ .++.++++.++... .+..+
T Consensus 230 ~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (355)
T TIGR03301 230 GKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGF-QPLLPERWQSPIIVSFLYPDDPDFDFDD 308 (355)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCC-eeecCCCCCCCcEEEEECCCCCcchHHH
Confidence 11345677777777666665321 22567778889999999999988765 43322 23456788887521 24567
Q ss_pred HHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 336 VVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
+..+|. ++||.+.+|..+.. +++||++.. ++.++++.+++.|+++
T Consensus 309 ~~~~l~-~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 309 FYQELK-ERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred HHHHHH-HCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 777775 78999999875543 799999855 7999999999999875
No 153
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=1.1e-28 Score=234.35 Aligned_cols=329 Identities=16% Similarity=0.118 Sum_probs=233.6
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC-----CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH-HHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ-AFV 103 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~-a~~ 103 (400)
..++.++.+.+++++|+.+.++..+. . . ...|.+ ..|..++++++++++++.+|.+.++++++++++. +..
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~ 96 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN-E-F-YTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEA 96 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc-c-C-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHH
Confidence 44589999999998777777766665 2 1 234444 6788999999999999999987777877775554 444
Q ss_pred HHHHHhcCC--CCEEEEeCCCccchhHHHHhcC----cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768 104 NIVLTLCDA--GDSVVMFAPYYFNSYMSFQMTG----VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (400)
Q Consensus 104 ~~~~~l~~~--gd~vlv~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt 177 (400)
.++.++..+ ||+|+++++.|+++...++..| ++++.+ |.+++ +.+|++.+++.+.+++ ++|++++|+ ++
T Consensus 97 ~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~t--~~viv~~~~-~~ 171 (398)
T cd00613 97 AGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEV-PSDEG-GTVDLEALKEEVSEEV--AALMVQYPN-TL 171 (398)
T ss_pred HHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEe-ccCCC-CCcCHHHHHHhcCCCe--EEEEEECCC-CC
Confidence 455555565 9999999999999988887777 888888 77654 3679999999997665 999999885 89
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCC----cceeEEEEccCCcHHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM----GWRVGYIAYPSEVEGF 253 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~~~G~i~~~~~~~~~ 253 (400)
|.+.+ .+++|.++|++||+++|+|+++..+.. .......+.+++++|+||++ ++ |+++|+++.+ +++
T Consensus 172 G~~~~--~l~~i~~la~~~g~~livD~~~~~~~~---~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~---~~~ 242 (398)
T cd00613 172 GVFED--LIKEIADIAHSAGALVYVDGDNLNLTG---LKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVK---KEL 242 (398)
T ss_pred ceecc--hHHHHHHHHHhcCCEEEEEeccccccC---CCChHHcCCCEEEeeccccC-CCCCCCCCceeEEEEh---hhh
Confidence 99964 369999999999999999998764331 11112335789999999998 44 7889999988 566
Q ss_pred HHHHHHh-----------------------------hccCCcCccHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHH
Q 015768 254 ATQLLKV-----------------------------QDNIPICASIISQHLALYSLQ-TGPEWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 254 ~~~l~~~-----------------------------~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~ 303 (400)
.+.+... .....++.+.....++...+. ...+.++++.++++++++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~ 322 (398)
T cd00613 243 VRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAK 322 (398)
T ss_pred HhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 5553110 001112223333333333333 3345677888999999999999
Q ss_pred HhccCCCCcccCCCCc--eEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 304 ALSPLGEGAVKGGEGA--IYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 304 ~L~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
.|++++.... +.+. ..++++++.. ..+..+++..|. ++||.+.... ...++.+|++++. +|++|++++++.|
T Consensus 323 ~L~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~L~-~~gi~~~~~~-~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 323 RLKEVGGVLP--FNGPFFHEFVLRLPPLYGIRAEDLAKALI-DGGFHAPTMY-LPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred HHHhcCCccc--CCCCeeEEEEEEcCCcchHHHHHHHHhhh-hcCccccccc-cCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 9998876331 2222 2356677642 124677888876 7899875422 1245789999988 9999999998764
No 154
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=2.7e-28 Score=229.13 Aligned_cols=321 Identities=16% Similarity=0.159 Sum_probs=230.1
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~--~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~ 120 (400)
++++.+++++.... . .+. ....+..+.+.+.+++..|.++ +.+++++|+|++++.++.++..+||.|++..
T Consensus 15 ~~~~~~~~a~~~~~-~----~~~--~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~ 87 (368)
T PRK13479 15 TTSRTVREAMLRDW-G----SWD--DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPD 87 (368)
T ss_pred CCCHHHHHHhCCCC-C----CCC--hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence 34566666655443 1 111 1133455566666666667754 5688999999999999999999999999998
Q ss_pred CCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768 121 PYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (400)
Q Consensus 121 p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (400)
++|++.. ..++..|++++.+ |.+++ ..+|++++++.++.++..+++++++++||||...| +++|.++|+++|+
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~i-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~ 162 (368)
T PRK13479 88 NGAYGARIAQIAEYLGIAHVVL-DTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHGK 162 (368)
T ss_pred CCchHHHHHHHHHHcCCcEEEE-ECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcCC
Confidence 8887764 6778899999999 87644 36799999999875554578999999999999999 8899999999999
Q ss_pred EEEEcccccccccCCCCccccCCCcEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHHhh----------------
Q 015768 199 WLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ---------------- 261 (400)
Q Consensus 199 ~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~~~---------------- 261 (400)
++|+|+++.. +..+......+.+++++|++|++ |.+| +||++.+ +++++.+....
T Consensus 163 ~livDa~~~~---g~~~~~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
T PRK13479 163 RLIVDAMSSF---GAIPIDIAELGIDALISSANKCIEGVPG--FGFVIAR---RSELEACKGNSRSLSLDLYDQWAYMEK 234 (368)
T ss_pred EEEEEccccc---CCccccccccCceEEEecCccccccCCC--ceEEEEC---HHHHHHhhcCCCCeeecHHHHHhhhcc
Confidence 9999977653 23233333345678889999987 4455 6999998 67766655421
Q ss_pred -ccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEEEeeCCCC-CCCHH
Q 015768 262 -DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYLWARLPEK-HLDDF 334 (400)
Q Consensus 262 -~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~ 334 (400)
....++++.+.+.++..+++.. ..+.++..+++.++++++++.|++++. .+..+ .......+.++.. ..+..
T Consensus 235 ~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (368)
T PRK13479 235 TGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGF-EPLLDAEIQSPIIVTFHAPADPAYDFK 313 (368)
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC-cccCCchhcCceEEEEECCCCCCcCHH
Confidence 1122466766666666666531 223567778899999999999998865 33322 1122233344432 13567
Q ss_pred HHHHHHHHhcCeEEeCCCccCCCCeEEEEe-ccCCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACGCRGHLRISF-GGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
++..+|. ++||.+.+|..+ ..+++|++. +.++++|++.+++.|++++.++
T Consensus 314 ~l~~~L~-~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 314 EFYERLK-EQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred HHHHHHH-HCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 8888875 789999987643 356899986 5589999999999999998764
No 155
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=2.6e-28 Score=229.94 Aligned_cols=334 Identities=16% Similarity=0.131 Sum_probs=230.6
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC---CCCC----CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS---KYGA----DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~----~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
++|+++.-.-.-++++++++++.++....... .+.. .....++++.+++++ |. +++++++|+++++.
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g~--~~~~~~~g~t~a~~ 92 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----GM--DEARVTHGAREGKF 92 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHH
Confidence 45666554433457889999999888542110 1111 223455666666655 65 46888999999999
Q ss_pred HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhccC-----CCCeEEEEeCCCCCC
Q 015768 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLETK-----PTPKLVSVVNPGNPS 177 (400)
Q Consensus 104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~-----~~~~~v~l~~p~npt 177 (400)
.++.++.++||+|+++.++|++....++..|++++.+ |.+ ++++.+|++.+++.++.. +.+++|++++|+|++
T Consensus 93 ~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~t 171 (387)
T PRK09331 93 AVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREV-PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNY 171 (387)
T ss_pred HHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE-eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCC
Confidence 9999999999999999999999988889999999999 773 234568999999988642 246999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
|.+.+ +++|.++|+++|+++++|++|+.... +......+.+++++|+||+++ ++.++||++++ +++++++
T Consensus 172 G~~~~---l~~I~~la~~~g~~livD~a~~~g~~---~~~~~~~g~D~~~~s~~K~l~-~~~~~G~l~~~---~~~i~~~ 241 (387)
T PRK09331 172 GNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRM---PVDGKKLGADFIVGSGHKSMA-ASAPSGVLATT---EEYADKV 241 (387)
T ss_pred ccccc---HHHHHHHHHHcCCEEEEECCcccCCc---CCCHHHcCCCEEEeeCccccc-CCCCEEEEEEC---HHHHhhc
Confidence 99999 99999999999999999999984321 222233467799999999997 55689999988 6777776
Q ss_pred HHhhccC--------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--CCCceEEEeeCC
Q 015768 258 LKVQDNI--------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWARLP 327 (400)
Q Consensus 258 ~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~~ 327 (400)
......+ ..+.+.....++..+++...+. .+..++..++++++++.|++++++++.. +....++.+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~ 320 (387)
T PRK09331 242 FRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETP 320 (387)
T ss_pred ccccCCCcccceeeeceecCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCC
Confidence 5432111 1112222223333333321122 2345556778889999999995556553 223455555655
Q ss_pred CC-------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 328 EK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 328 ~~-------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.. ..+..++...|. ++||...+. +....+|++....++++++.+++.|+++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~L~-~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 321 SFDEIAKKHKRRGFFLYEELK-KRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred chhHHhhhccccchhHHHHHH-HcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 11 112356788775 789984332 23456777653368999999999999887763
No 156
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.97 E-value=6e-28 Score=227.29 Aligned_cols=346 Identities=16% Similarity=0.108 Sum_probs=244.6
Q ss_pred hHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC
Q 015768 17 PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA 96 (400)
Q Consensus 17 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~ 96 (400)
..+..+.++.+++.++-.+ -++..-+++|.+++++.+.+...... .....+...+.+.+++.+++.+|.+++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ 83 (371)
T PRK13520 6 EILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNLGD-PGLFPGTAKLEEEAVEMLGELLHLPDAYGYITS 83 (371)
T ss_pred HHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCCCC-cccCccHHHHHHHHHHHHHHHhCCCCCCeEEec
Confidence 3444555555554443222 22223346788889988887653211 111234566667888888888898877889999
Q ss_pred ChHHHHHHHHHHhcC----CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768 97 GANQAFVNIVLTLCD----AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 97 g~t~a~~~~~~~l~~----~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~ 172 (400)
|+++++..++.++.+ +|++|++.+++|+++...++..|++++.+ |.+++ +.+|++.+++.+++++ ++|++++
T Consensus 84 ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~vi~~~ 159 (371)
T PRK13520 84 GGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRA-PLDDD-YRVDVKAVEDLIDDNT--IGIVGIA 159 (371)
T ss_pred CcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEe-cCCCC-CcCCHHHHHHHHhhCC--EEEEEEc
Confidence 999999999887753 57899999999999999888899999999 87654 4679999999998665 7777788
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCC--ccccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRK--HCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~--~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
++|++|.+.| +++|.++|+++|+++++|++|+.+... ... ......+.+.+..|.+|+. .+|.++|+++..+
T Consensus 160 ~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~-~a~~~~G~~~~~~ 235 (371)
T PRK13520 160 GTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMG-LAPIPAGGILFRD 235 (371)
T ss_pred CCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcccc-CccCCceEEEEcC
Confidence 8999999999 899999999999999999999866421 111 1111234566777889965 4677888877654
Q ss_pred CcHHHHHHHHHhhccC--------CcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCC
Q 015768 249 EVEGFATQLLKVQDNI--------PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEG 318 (400)
Q Consensus 249 ~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~ 318 (400)
+++.+.+....... ..+.+.....++..+++. ..+..++..++..++++++.+.|++++. . +..+.
T Consensus 236 --~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~- 311 (371)
T PRK13520 236 --ESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGF-EPVIEPV- 311 (371)
T ss_pred --HHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCC-EEecCCC-
Confidence 56666654211100 112233445555555553 2344577888999999999999998854 5 44444
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
..++.++++ +.+++..+|. ++||.+.++. .++++|++++. ++++|++.+++.|+++++
T Consensus 312 ~~~v~~~~~----~~~~v~~~L~-~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 312 LNIVAFDDP----NPDEVREKLR-ERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred ceEEEEecC----CHHHHHHHHH-HCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 567777776 4678888775 6799997643 45789999876 799999999999998764
No 157
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=1.7e-28 Score=232.66 Aligned_cols=336 Identities=14% Similarity=0.127 Sum_probs=234.9
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC--CCCC--cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG--ADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g--~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
.+.|+.+... +.|+.|++++.+.+......... ...+ ..+..+.+.+.+++.+|+++++|++++|+|++++.++.
T Consensus 4 ~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~ 82 (402)
T TIGR02006 4 PIYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIK 82 (402)
T ss_pred cEEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHH
Confidence 3666666543 56789999998877532211110 0001 12334444555555568888999999999999999987
Q ss_pred Hhc----CCCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768 108 TLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 108 ~l~----~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~ 180 (400)
++. ++||+|+++.++|+++...+ +..|++++.+ |.++++ .+|++.+++.+++++ +++++++++||||.+
T Consensus 83 ~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~~-~~d~~~l~~~l~~~~--~lv~v~~~~n~tG~~ 158 (402)
T TIGR02006 83 GIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYL-PPKSNG-LIDLEELKAAIRDDT--ILVSIMHVNNEIGVI 158 (402)
T ss_pred HHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEE-ccCCCC-cCCHHHHHHhcCCCC--EEEEEECCCcCceec
Confidence 763 68999999999998876554 4569999999 877554 689999999998665 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
.| +++|.++|+++|+++++|++++... .+......+.++++.|++|.+|.+| +|+++.+++ ...++...
T Consensus 159 ~~---~~~I~~l~~~~g~~livD~a~a~g~---~~~~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~---~~~~~~~~ 227 (402)
T TIGR02006 159 QD---IAAIGEICRERKVFFHVDAAQSVGK---IPINVNELKVDLMSISGHKIYGPKG--IGALYVRRK---PRVRLEAL 227 (402)
T ss_pred cc---HHHHHHHHHHcCCEEEEEcchhcCC---cccCccccCCCEEEEehhhhcCCCc--eEEEEEccC---CCCCCCce
Confidence 99 8899999999999999999997432 2222334567799999999876445 788776632 11111111
Q ss_pred -------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEeeCCCCC
Q 015768 261 -------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKH 330 (400)
Q Consensus 261 -------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~ 330 (400)
+.....+++.....++..+++...++++...++++++++++++.|++++.+.+.++. ......+.++.
T Consensus 228 ~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~-- 305 (402)
T TIGR02006 228 IHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNY-- 305 (402)
T ss_pred ecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeC--
Confidence 111234567777777767776433456777888999999999999887764444221 11111233332
Q ss_pred CCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 331 LDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 331 ~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+.+++...+ .++.+..|..|.. .+.+|+|++. +|++|++.+++.|+++++.+..
T Consensus 306 ~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 306 VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred cCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2355555433 5898888877642 3689999998 9999999999999999987643
No 158
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=1.3e-27 Score=225.04 Aligned_cols=343 Identities=15% Similarity=0.137 Sum_probs=239.1
Q ss_pred chHHHHHHHHHhcCCCeEEcCCCC----CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc
Q 015768 16 MPIMVQIQELVRGAKNAVSLAQGV----VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS 91 (400)
Q Consensus 16 ~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~ 91 (400)
..+..++..++++.-+. +++. ....+.+.+++++........ ..-+...+...+.+.+.+.+++.+|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~~~~ 78 (373)
T TIGR03812 3 EEVLEELKEYRSEDLKY---SDGRILGSMCTNPHPIAVKAYDMFIETNL-GDPGLFPGTKKIEEEVVGSLGNLLHLPDAY 78 (373)
T ss_pred HHHHHHHHHHHhcCCCC---CCCcEEEEEeCCchHHHHHHHHHHhhcCC-CCcccCccHHHHHHHHHHHHHHHhCCCCCC
Confidence 34566777777664333 1111 111245566777777654321 111112345677778888888888998888
Q ss_pred EEEeCChHHHHHHHHHHhc------CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768 92 VMVTAGANQAFVNIVLTLC------DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~------~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~ 165 (400)
+++++|+++++..++.++. ++||+|++++++|+++...++..|++++.+ +.+++ +.+|++++++.+.+++
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v-~~~~~-~~~d~~~l~~~l~~~~-- 154 (373)
T TIGR03812 79 GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYA-PLDED-YTVDVKDVEDLIDDNT-- 154 (373)
T ss_pred eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEE-eeCCC-CCcCHHHHHHHHhhCc--
Confidence 8999999999988877664 467999999999999999999999999999 87654 5789999999997665
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC----CC---CccccCCCcEEEEeccccccCCCc
Q 015768 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD----GR---KHCCVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~----~~---~~~~~~~~~~i~~~s~sK~~g~~g 238 (400)
..+++.+|+||||.+.+ +++|.++|+++|+++++|++|+.+... +. .......+.+.+..|.+|+ +.++
T Consensus 155 ~~vv~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~-~~~~ 230 (373)
T TIGR03812 155 IGIVGIAGTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKM-GLSP 230 (373)
T ss_pred EEEEEECCCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECcccc-CCCc
Confidence 44444458999999999 888999999999999999999865421 00 1111112445667788994 4566
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccC--------CcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNI--------PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLG 309 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (400)
.++|+++..+ +++++.+....... ..+.+.....++..+++. ..+.+++..+++.++++++++.|++++
T Consensus 231 ~~~G~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g 308 (373)
T TIGR03812 231 IPAGGILFRS--KSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIG 308 (373)
T ss_pred CCceEEEEeC--HHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7787665443 56666653211110 013344556666666664 235567888999999999999999987
Q ss_pred CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 310 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
...+..+. .+++.++++. ..++..+|. ++||.+.++. .++++|++++. ++++|++.+++.|++
T Consensus 309 ~~~~~~~~-~~~v~~~~~~----~~~v~~~L~-~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 309 FEPVIEPV-LNIVAFEVDD----PEEVRKKLR-DRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CeEEcCCC-ceEEEEEeCC----HHHHHHHHH-HCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 64444444 6677777763 457887775 7899997653 46799999887 799999999998875
No 159
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.4e-28 Score=214.78 Aligned_cols=339 Identities=22% Similarity=0.354 Sum_probs=257.7
Q ss_pred CcHHHHHHHHHhhcC--CCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHhc-CCCCEEEE
Q 015768 44 PPKMAMEKVKELVWD--PSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLC-DAGDSVVM 118 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv 118 (400)
.|..++++..+.+.. +..+.|+.+.|.+-+|+.+|+++.++.|. +|++|++|+|++.|+..++..++ .+.+.|++
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~Gvli 166 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLI 166 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEe
Confidence 456777777776654 35778999999999999999999999986 47999999999999999999986 56799999
Q ss_pred eCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015768 119 FAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194 (400)
Q Consensus 119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~ 194 (400)
+-|-|+-+...+...|...+.+ .+++ .+|.+|.++|++.+. .+-.++++++.||.||||.+++.+.+++|..+|.
T Consensus 167 PiPQYPLYsAti~l~~~~~v~Y-yLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~ 245 (475)
T KOG0258|consen 167 PIPQYPLYSATISLLGGTQVPY-YLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAA 245 (475)
T ss_pred ecCCCchhHHHHHHhCCcccce-eeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHH
Confidence 9999999998888899888777 6665 479999999999886 3445799999999999999999999999999999
Q ss_pred HcCCEEEEcccccccccCCC-Ccccc---------CC-C--cEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHHh
Q 015768 195 AAGSWLVVDNTYEYFMYDGR-KHCCV---------EG-D--HVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 195 ~~~~~li~D~a~~~~~~~~~-~~~~~---------~~-~--~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
++++.++.||+|....+... ++.+. .. + ..+...|.||.+ |=.|.|.||+-.-+-.++..+.+.+.
T Consensus 246 ~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl 325 (475)
T KOG0258|consen 246 EEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKL 325 (475)
T ss_pred HcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHH
Confidence 99999999999998887653 33221 11 1 235567889998 33789999975554335555555443
Q ss_pred hccCCcCccHHHHHHHHHHhcC---Cc-------HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC--C
Q 015768 261 QDNIPICASIISQHLALYSLQT---GP-------EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP--E 328 (400)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~---~~-------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~ 328 (400)
.. ....++...|......... ++ ...+...+.+++++..+.+.++++.++.+..++|+++.+.++. .
T Consensus 326 ~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~ 404 (475)
T KOG0258|consen 326 AS-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPP 404 (475)
T ss_pred Hh-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCH
Confidence 32 2333444455544444432 11 2235566777888888999999999999999999999986653 2
Q ss_pred CC--------CCHHH-HHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 329 KH--------LDDFE-VVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 329 ~~--------~~~~~-~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.. ...+. .+..|++..||++.||+.|+. .-|+|.++-- .. + ..+++++++-.++..
T Consensus 405 kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp--~~-~-~~i~~~~~fH~~f~~ 472 (475)
T KOG0258|consen 405 KAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILP--PG-L-EIIEKFKKFHAEFMD 472 (475)
T ss_pred HHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecC--ch-h-HHHHHHHHHHHHHHH
Confidence 11 12222 456788999999999999984 3489998753 33 4 888888888887764
No 160
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.97 E-value=1.7e-28 Score=232.08 Aligned_cols=335 Identities=12% Similarity=0.144 Sum_probs=233.5
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++++++.+.+.+..... .. ...+....+++.+.+..+ .+.+++++++++|++
T Consensus 37 ~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~--~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~SGseA~e 111 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTS--RA-FHSDQLGPWYEKVAKLTG--KDMVLPMNTGAEAVE 111 (396)
T ss_pred CCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccc--cc-cCCHHHHHHHHHHHhcCC--CCeEEEcCChHHHHH
Confidence 4578899998775 3343 78999999999887643211 11 122344556666665544 468999999999999
Q ss_pred HHHHHhcC---------CC-CEEEEeCCCccchhH-HHHhcCcEEEE--eccCCCC----CCCCCHHHHHHhhccCCCCe
Q 015768 104 NIVLTLCD---------AG-DSVVMFAPYYFNSYM-SFQMTGVTHIL--VGPCSSK----TLHPDADWLEKTLETKPTPK 166 (400)
Q Consensus 104 ~~~~~l~~---------~g-d~vlv~~p~~~~~~~-~~~~~g~~~~~--~~~~~~~----~~~~~~e~l~~~l~~~~~~~ 166 (400)
.+++.+.. +| ++|+....+|++... .+...+..... ..|..++ .+ .|++.+++.+.+++ +
T Consensus 112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~~~--~ 188 (396)
T PRK04073 112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEALKAAITPNT--A 188 (396)
T ss_pred HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHHHHHhcccCe--E
Confidence 99998741 34 789999888887653 33322211000 0011000 11 17889998887554 8
Q ss_pred EEEEeCCCCCCccCCCH-HHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768 167 LVSVVNPGNPSGTYIPE-RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245 (400)
Q Consensus 167 ~v~l~~p~nptG~~~~~-~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~ 245 (400)
+|++++++||+|.+++. +++++|.++|++||+++|+||+|.++...+........+....+.++||.+|.+|+|+||++
T Consensus 189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~ 268 (396)
T PRK04073 189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVA 268 (396)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEE
Confidence 88888889999998765 57999999999999999999999977654432211111111223467999997779999999
Q ss_pred ccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--CcccCCCCceEEE
Q 015768 246 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGGEGAIYLW 323 (400)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~~ 323 (400)
++ +++.+.+.......+++.+++.+.++.++|+...+ ....++..++.+++.+.|++++. +....+. +.+++
T Consensus 269 ~~---~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~--~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~-g~~~~ 342 (396)
T PRK04073 269 AN---RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEE--EKLPERSLELGEYFKEQLKEIDNPMIKEVRGR-GLFIG 342 (396)
T ss_pred Ec---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHhhcCCcccceecc-eEEEE
Confidence 98 78888876655556788899999999999874211 23445566778888888887632 2333444 67788
Q ss_pred eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+.++. +..++..+|+ ++||.+.+. .++++||+++. .+++++++++++|++++
T Consensus 343 ~~~~~---~~~~~~~~l~-~~Gv~~~~~----~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 343 VELNE---PARPYCEALK-EEGLLCKET----HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEecc---hHHHHHHHHH-HCCeEEecC----CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 88763 4677888776 789999763 25799999765 79999999999999875
No 161
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.97 E-value=5.6e-29 Score=231.94 Aligned_cols=308 Identities=16% Similarity=0.143 Sum_probs=228.0
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcC----------
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD---------- 111 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~---------- 111 (400)
.++..+........++....|+...+..++++++++++++.+|.+ ..++++|+|+|+++..++.++..
T Consensus 10 ~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~ 89 (345)
T cd06450 10 DPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGG 89 (345)
T ss_pred cHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccc
Confidence 344444444444444335568888889999999999999999875 46899999999999999998752
Q ss_pred --C--CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCH
Q 015768 112 --A--GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPE 183 (400)
Q Consensus 112 --~--gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~ 183 (400)
+ ++.|+++.++|.++...++..|.+++.+ |.++++ .+|++++++.+.+ ...++++++++++||+|.+.+
T Consensus 90 ~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~- 166 (345)
T cd06450 90 GRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLV-PVDEDG-RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP- 166 (345)
T ss_pred ccccCCeEEEEcCcchhHHHHHHHHHhcCeEEe-eeCCCC-CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC-
Confidence 2 3478899999999988888889999999 887765 7899999999875 112488888999999999988
Q ss_pred HHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
+++|.++|+++|+++++|++|+.+........ ....+.+.+..|+||+++ ++.++|++..+
T Consensus 167 --~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~------------- 230 (345)
T cd06450 167 --LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR------------- 230 (345)
T ss_pred --HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH-------------
Confidence 89999999999999999999987764321111 111245677889999875 56677776533
Q ss_pred hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---CCCHHHHH
Q 015768 261 QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---HLDDFEVV 337 (400)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 337 (400)
.+.++++...+. .+.++++.++..++++++.+.|++++.+.+..+....++.+.++.. ..+..++.
T Consensus 231 ---------~~~~~~~l~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~ 299 (345)
T cd06450 231 ---------ALKLWATLRRFG--RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLS 299 (345)
T ss_pred ---------HHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHH
Confidence 444455555554 3456788888999999999999998765555433355666666542 12456788
Q ss_pred HHHHHhcCeEEeCCCccCCCCeEEEEecc-C-CHHHHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGACGCRGHLRISFGG-L-VEDDCKAAADRLRRG 382 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~-~~~~~~~~~~~l~~~ 382 (400)
+.|. ++|+.+.++..+..+.++|++++. . +.+|++++++.|+++
T Consensus 300 ~~L~-~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~~ 345 (345)
T cd06450 300 DRLN-ERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIERA 345 (345)
T ss_pred HHHH-hcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHhC
Confidence 7775 676666555544456799999986 4 999999999998763
No 162
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=4.2e-28 Score=228.46 Aligned_cols=332 Identities=16% Similarity=0.169 Sum_probs=235.4
Q ss_pred hcCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||.++.. .++ .+|++++++.+.+++... . ......+++.++++++.+..+ .+.+++++++++|++
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~la~~l~~~~~--~~~~~~~~sG~~a~~ 100 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH--V-SNLFTNSLQEEVASLLAENSA--GDLVFFCNSGAEANE 100 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc--c-ccccCCHHHHHHHHHHHhcCC--CCEEEEeCCcHHHHH
Confidence 56889999988862 333 789999999999876321 1 123346788999999976654 368999999999999
Q ss_pred HHHHHhc-CCC-CEEEEeCCCccchhH-HHHhcCcEEE---EeccCCCCC-C--CCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 104 NIVLTLC-DAG-DSVVMFAPYYFNSYM-SFQMTGVTHI---LVGPCSSKT-L--HPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 104 ~~~~~l~-~~g-d~vlv~~p~~~~~~~-~~~~~g~~~~---~~~~~~~~~-~--~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
.++.... -+| ++|++.+++|++... .+...+.... .. |..++- . ..|++.+++.+.+++ ++|+++.++
T Consensus 101 ~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~~~~~~--~~ii~e~i~ 177 (377)
T PRK02936 101 AALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFG-PLLPGFTHVPFNDIKALKEVMNEEV--AAVMLEVVQ 177 (377)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCC-CCCCCceEeCCCCHHHHHHhccCCe--EEEEEeccc
Confidence 9999653 234 679999999987553 3333332110 11 111110 0 116889999887554 899999889
Q ss_pred CCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768 175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 251 (400)
Q Consensus 175 nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~ 251 (400)
+++|.. .+.+++++|.++|++||+++|+||+|.++...+..... .....+ +.++||.++ +|+|+||++.+ +
T Consensus 178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d--i~t~sK~l~-~G~~ig~v~~~---~ 251 (377)
T PRK02936 178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD--IVTVAKGLG-NGIPVGAMIGK---K 251 (377)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc--EEEEccccc-CCCccEEEEEc---H
Confidence 998876 58899999999999999999999999877655432211 111122 347899998 89999999998 7
Q ss_pred HHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCcccCCCCceEEEeeCC
Q 015768 252 GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEGAIYLWARLP 327 (400)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~ 327 (400)
++.+.+.......+++.+++.+.++.++|+... ..+..++++++.+.+++.|++ ++.+....+. +.++|+.++
T Consensus 252 ~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~-g~~~~i~~~ 328 (377)
T PRK02936 252 ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK--QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGK-GLMIGIECT 328 (377)
T ss_pred HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeec-ceEEEEEec
Confidence 888887655555677889999999999997521 123445555666666666654 3332222343 788999987
Q ss_pred CCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 328 EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
. +...+...+ .++||.+.|+. .+++||+++. .+++++++++++|.+++
T Consensus 329 ~---~~~~~~~~l-~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 329 E---EVAPVIEQL-REEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred c---hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 4 255666655 58999998743 5799999754 79999999999998764
No 163
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.97 E-value=1.4e-27 Score=227.85 Aligned_cols=359 Identities=17% Similarity=0.124 Sum_probs=236.8
Q ss_pred HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHh
Q 015768 10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~ 83 (400)
++++.+.....-+.+.-...++.++|+.++++ +|+.|++++...+......+++ .......+.+...+.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~ 82 (416)
T PRK00011 5 NLAEYDPEIADAIEQELKRQEEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKE 82 (416)
T ss_pred hhhhcCHHHHHHHHHHHHHHhcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHH
Confidence 44333333333334433334788999998877 5799999987765322111111 111122333334446777
Q ss_pred hcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH-----HHHhcCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768 84 ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-----SFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (400)
Q Consensus 84 ~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~ 158 (400)
.+|.+...|++++ +|+++..++.++.+|||+|+++.|+|.++.. .+...|++++.+ +.+.+++.+|++++++.
T Consensus 83 ~~g~~~~~i~~~s-gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~ 160 (416)
T PRK00011 83 LFGAEYANVQPHS-GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSY-GVDEETGLIDYDEVEKL 160 (416)
T ss_pred HhCCCceeeecCC-chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeec-CcCcccCCcCHHHHHHH
Confidence 7788776666655 5789999999999999999999999976432 123346788888 77755567899999999
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccCCC
Q 015768 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 159 l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~ 237 (400)
++... +++|++++++ +|...| +++|.++|+++|+++|+|++|..... .+....... ..+++++|+||++ +
T Consensus 161 i~~~~-~k~v~~~~~~--~~~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l--~ 231 (416)
T PRK00011 161 ALEHK-PKLIIAGASA--YSRPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTL--R 231 (416)
T ss_pred HHhcC-CCEEEECCCc--CCCccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCC--C
Confidence 97422 4888887544 456667 89999999999999999999864322 221111122 4568899999987 5
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCcCc-cHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICA-SIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315 (400)
Q Consensus 238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (400)
|.++||+++++ +++.+++.........+. ......++..++.. ..++++++.++++++++++++.|++.+. .+..
T Consensus 232 g~~gg~i~~~~--~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~ 308 (416)
T PRK00011 232 GPRGGLILTND--EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGF-RVVS 308 (416)
T ss_pred CCCceEEEeCC--HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCC-eeee
Confidence 78889999865 678888876654333322 22233332223321 2245678889999999999999998764 4432
Q ss_pred -CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC-cc-----CCCCeEEEEec-----cCCHHHHHHHHHHHHHHH
Q 015768 316 -GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG-AC-----GCRGHLRISFG-----GLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 316 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~-~~-----~~~~~iRi~~~-----~~~~~~~~~~~~~l~~~l 383 (400)
...++++|+.+++...+..++...| +++||.+..+. .+ ..+..+|++.. .++++|++..++.|++++
T Consensus 309 ~~~~~~~~~i~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~ 387 (416)
T PRK00011 309 GGTDNHLVLVDLRSKGLTGKEAEAAL-EEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVL 387 (416)
T ss_pred cCCCCeEEEEeCcccCCCHHHHHHHH-HHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHH
Confidence 1225888998864333566777766 58999997432 11 13567999642 257899999999998887
Q ss_pred HH
Q 015768 384 EE 385 (400)
Q Consensus 384 ~~ 385 (400)
..
T Consensus 388 ~~ 389 (416)
T PRK00011 388 DN 389 (416)
T ss_pred hc
Confidence 64
No 164
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.97 E-value=1.1e-27 Score=226.96 Aligned_cols=334 Identities=15% Similarity=0.140 Sum_probs=234.5
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+... ++.. ...+...++++.+.+..+ .+.++++++|++|+.
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e 111 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--ISNV-FTNEPALRLAKKLIDATF--AERVFFANSGAEANE 111 (403)
T ss_pred CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCc--ccCc-cCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHH
Confidence 4578899998873 3443 789999999999876321 1111 112234466666665543 468999999999999
Q ss_pred HHHHHhc--------CCCCEEEEeCCCccchhHHH-HhcCc------------EEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 104 NIVLTLC--------DAGDSVVMFAPYYFNSYMSF-QMTGV------------THILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 104 ~~~~~l~--------~~gd~vlv~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
.+++... ...+.|+..+.+|++..... ...+. .++.+ | ..|++.+++.+.++
T Consensus 112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~d~~~l~~~l~~~ 184 (403)
T PRK05093 112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHV-P------FNDLAAVKAVIDDH 184 (403)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEe-C------CCCHHHHHHHhcCC
Confidence 9999763 12367888888888865432 21111 11222 1 12788999888654
Q ss_pred CCCeEEEEeCCCCCCccC--CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcce
Q 015768 163 PTPKLVSVVNPGNPSGTY--IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~--~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~ 240 (400)
+ ++|+++ |.||+|-+ .+.+++++|.++|++||+++|+||+|.++.+.+........+...-+.|+||.++ +|+|
T Consensus 185 ~--aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G~r 260 (403)
T PRK05093 185 T--CAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALG-GGFP 260 (403)
T ss_pred e--EEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEeccccc-CCcc
Confidence 3 788777 66666654 4889999999999999999999999998766553221111111122568999998 8999
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--Ccc-cCCC
Q 015768 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAV-KGGE 317 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~-~~~~ 317 (400)
+||++.+ +++++.+.......+++.+++.+.++.++|+... ..+..++++++.+.+.+.|++++. ..+ ..+.
T Consensus 261 ig~vv~~---~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 335 (403)
T PRK05093 261 IGAMLTT---AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN--TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRG 335 (403)
T ss_pred eEEEEEc---HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEee
Confidence 9999999 7888887765555677889999999888776421 134567788888888888887632 111 2233
Q ss_pred CceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 318 GAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 318 ~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+.++|+.++... .+..+++..++ ++||.+.++ +.+++|++++. .+++++++++++|.+++.++
T Consensus 336 ~G~~~~~~l~~~~~~~~~~~~~~l~-~~Gv~v~~~----g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 336 MGLLIGAELKPQYKGRARDFLNAAA-EEGVMVLVA----GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CceEEEEEecCcchhHHHHHHHHHH-HCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4788998886432 13567888776 689999874 35799998777 69999999999999998764
No 165
>PRK14012 cysteine desulfurase; Provisional
Probab=99.97 E-value=1.5e-27 Score=226.44 Aligned_cols=332 Identities=15% Similarity=0.117 Sum_probs=226.7
Q ss_pred EEcCCCCCCCCCcHHHHHHHHHhhc--CCCCCCCC--CCCC--cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 33 VSLAQGVVYWQPPKMAMEKVKELVW--DPSISKYG--ADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 33 i~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~y~--~~~g--~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
+.|+.+... ++|+.+++++.+++. +....... ...+ .....+++.+.+++..|.+++++++++|+|++++.++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 566666543 567889999988775 22111110 0001 1234445555566666888899999999999999998
Q ss_pred HHhc----CCCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768 107 LTLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (400)
Q Consensus 107 ~~l~----~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~ 179 (400)
.++. ++||+|+++.++|++....+ +..|++++.+ +.++++ .+|++.+++.+++++ +++++++++||||.
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v-~~~~~g-~~d~~~l~~~i~~~t--~lv~~~~~~n~tG~ 159 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-DPQSNG-IIDLEKLEAAMRDDT--ILVSIMHVNNEIGV 159 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE-ccCCCC-cCCHHHHHHhcCCCC--EEEEEECcCCCccc
Confidence 8774 78999999999998876544 4469999999 777554 689999999998766 89999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+.| +++|.++|+++|+++|+|++++... .+......+.++++.|++|.+| |+ ++|+++.+++ ...++..
T Consensus 160 ~~~---~~~I~~la~~~g~~vivD~a~~~g~---~~~~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~---~~~~~~~ 228 (404)
T PRK14012 160 IQD---IAAIGEICRERGIIFHVDAAQSVGK---VPIDLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRK---PRVRLEA 228 (404)
T ss_pred hhh---HHHHHHHHHHcCCEEEEEcchhcCC---cccCcccCCCCEEEEehhhccC-CC-ceEEEEEecC---CCCCCCc
Confidence 999 8899999999999999999998432 2222223456788899999876 43 5788777742 1111211
Q ss_pred h-hc------cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-----CCceEEEeeCC
Q 015768 260 V-QD------NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----EGAIYLWARLP 327 (400)
Q Consensus 260 ~-~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~ 327 (400)
. .. ....+.+.....++..++.....+.....++.+++++++.+.|++++.+.+.+. .....+++.+.
T Consensus 229 ~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~ 308 (404)
T PRK14012 229 QMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYV 308 (404)
T ss_pred eecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCc
Confidence 0 00 112233444444444554432233456677888888999999988765443321 11234455543
Q ss_pred CCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 328 EKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+.+++...| .++.+..|..|.. .+.+|++++. +|++|++.+++.|+++++++.
T Consensus 309 ----~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 309 ----EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred ----CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 234565544 3777777755521 3689999998 999999999999999988764
No 166
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.97 E-value=1.3e-27 Score=227.57 Aligned_cols=349 Identities=13% Similarity=0.073 Sum_probs=238.6
Q ss_pred hcCCCeEEcCCCCCC--CC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~--~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+... ++ .+|++.+++.+.+.+.... +......+ ...++++++.+..+.+. +.+++++++++|+
T Consensus 38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~-~~~~~~~~-~~~~la~~l~~~~~~~~~~~~~f~~sGsea~ 115 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHT-CFQVLAYE-PYLELCEKMNQKVPGDFAKKTLLVTTGSEAV 115 (425)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCc-cccccCCH-HHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence 567889999887633 33 5899999999998864321 21222233 34478888877655433 5889999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEE----------------EEeccCCCCCCCC--CHHHHHHhhcc-
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTH----------------ILVGPCSSKTLHP--DADWLEKTLET- 161 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~----------------~~~~~~~~~~~~~--~~e~l~~~l~~- 161 (400)
+.+++... .....|+...++|++....+...+... +.+ |.+..+... +++.+++.+..
T Consensus 116 e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~l~~~ 194 (425)
T PRK08088 116 ENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALY-PCPLHGVSEDDAIASIERIFKND 194 (425)
T ss_pred HHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCC-CccccCccHHHHHHHHHHHHHhc
Confidence 98888764 233567788999999876554433211 112 222222111 14568877751
Q ss_pred --CCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768 162 --KPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 162 --~~~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 238 (400)
...+++++++.. +++++..++.+++++|.++|++||+++|+||+|.++...+........+.++.+.||||.++ +|
T Consensus 195 ~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~-~G 273 (425)
T PRK08088 195 AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIA-GG 273 (425)
T ss_pred cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEecccc-CC
Confidence 234677777744 56666788999999999999999999999999997655443222112234455789999998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGG 316 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 316 (400)
+|+||++.+ +++++.+.......+++.+++.+.++..+|+... +...+.++...+..+.+.+.+...+.+....+
T Consensus 274 ~rig~v~~~---~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g 350 (425)
T PRK08088 274 FPLAGVTGR---AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRG 350 (425)
T ss_pred CcceeeEec---HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEec
Confidence 999999998 7888888776667788899999999999998632 33444444444444445444444554323333
Q ss_pred CCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 317 EGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 317 ~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
. |.++|+.+.... ....++...+. ++||.+.++..+ ++.+|++++. .+++++++++++|.+++++.
T Consensus 351 ~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~-~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 351 L-GAMIAIELFEDGDHSKPNAKLTAQIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred c-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-hCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 3 888999984221 12456777665 789998875543 5889999996 78999999999999999753
No 167
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.96 E-value=3e-27 Score=222.14 Aligned_cols=334 Identities=13% Similarity=0.106 Sum_probs=224.1
Q ss_pred EEcCCCC-CCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 33 VSLAQGV-VYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 33 i~~~~~~-~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
++|++++ ..+..+|++++++.+++++.. ...|+......++++++++++ |.+ +.+++++ ++.++..+
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~----g~e-~al~~~s-G~~a~~~~ 74 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL----GTE-SAILYSD-GASTTSST 74 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh----CCC-cEEEecC-cHHHHHHH
Confidence 3566654 666788999999998887621 222544445566666666666 543 4444444 55666688
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc---------CCCCeEEEEeCCCCC
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---------KPTPKLVSVVNPGNP 176 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~---------~~~~~~v~l~~p~np 176 (400)
+.++.++||.|+++.+.|.++...++..+++++.+ +..+. -+++.+.+.+.. .+..++|++++++|+
T Consensus 75 i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~-~~~d~---~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~ 150 (392)
T PLN03227 75 VAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWF-RHNDM---KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKN 150 (392)
T ss_pred HHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEe-CCCCH---HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCC
Confidence 88899999999999999999988877778887777 44311 133343333421 123588888899999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--C---cccc--CCCcEEEEeccccccCCCcceeEEEEccCC
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--K---HCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~---~~~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~ 249 (400)
+|.+.| ++++.++|++||+++|+||+|+....+.. . +... ..+.++++.|+||.+|.. .|+++++
T Consensus 151 ~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v~~~-- 222 (392)
T PLN03227 151 TGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMTVGS-- 222 (392)
T ss_pred CCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEEecC--
Confidence 999999 88999999999999999999983333221 1 1011 235589999999987633 4888887
Q ss_pred cHHHHHHHHHhhccCCcCc--cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc---------cCCCC
Q 015768 250 VEGFATQLLKVQDNIPICA--SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV---------KGGEG 318 (400)
Q Consensus 250 ~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~---------~~~~~ 318 (400)
+++++.+.......+++. +++.+.++..++....+ .+++.++++++.+++++.|++.+...+ .....
T Consensus 223 -~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~-~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~ 300 (392)
T PLN03227 223 -EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA-GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPI 300 (392)
T ss_pred -HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCC
Confidence 677766654444344444 35566666666643111 246777888889999998875322111 11122
Q ss_pred ceEEEeeCCCCCC--------CHHHHHHHHHHhcCeEEeCCC-------ccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHL--------DDFEVVRWLAHRHGVVVIPGG-------ACGCRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 319 ~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~-------~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
++++.+.+.+... ...++++.+. ++|+.+.+.. .+..+..+|++++. +|++|+++++++|+++
T Consensus 301 ~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~ 379 (392)
T PLN03227 301 SPIIYLRLSDQEATRRTDETLILDQIAHHSL-SEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEA 379 (392)
T ss_pred CCEEEEEeCCHHHhhhhhhhhHHHHHHHHHH-HCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHH
Confidence 5566666643110 1236777665 7899986422 12346789999998 9999999999999999
Q ss_pred HHHHh
Q 015768 383 LEELV 387 (400)
Q Consensus 383 l~~~~ 387 (400)
++++.
T Consensus 380 ~~~~~ 384 (392)
T PLN03227 380 VEAIL 384 (392)
T ss_pred HHHHH
Confidence 98874
No 168
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=2.1e-27 Score=224.69 Aligned_cols=291 Identities=17% Similarity=0.171 Sum_probs=208.0
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP 142 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~ 142 (400)
.+....+++.++++. | .+++++++|+++|+..++.+++++||+|+++.|+|.++...+ +..|++++.+ +
T Consensus 82 ~Pt~~~Le~~lA~le----g--~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~-~ 154 (427)
T PRK07049 82 HPNSEIVEDRLAVYE----G--AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGF-A 154 (427)
T ss_pred CcCHHHHHHHHHHHh----C--CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEE-e
Confidence 444567777777765 4 457889999999999999999999999999999999987654 5679887777 4
Q ss_pred CCCCCCCCCHHHHHHhhcc---CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH---cCCEEEEcccccccccCCCCc
Q 015768 143 CSSKTLHPDADWLEKTLET---KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA---AGSWLVVDNTYEYFMYDGRKH 216 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~---~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~---~~~~li~D~a~~~~~~~~~~~ 216 (400)
. + .|.+.+++.+.+ ...+++|++++|+||||.+++.+++.+|++.|+. +++++|+|++|.......
T Consensus 155 ~---~--~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~--- 226 (427)
T PRK07049 155 D---G--LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK--- 226 (427)
T ss_pred C---C--CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC---
Confidence 1 1 366777766641 1235999999999999999998888777777543 789999999987543322
Q ss_pred cccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 015768 217 CCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 295 (400)
Q Consensus 217 ~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 295 (400)
....+.++++.|+||.+| .+|+|+||++.+ +++++.+...+.....+.+++.++++...|+. +..+++++.
T Consensus 227 -pl~~g~divv~S~SK~~gG~~glr~G~vv~~---~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t----l~~R~~~~~ 298 (427)
T PRK07049 227 -PLEHGADLSVYSLTKYVGGHSDLVAGAVLGR---KALIRQVRALRSAIGTQLDPHSCWMLGRSLET----LVLRMERAN 298 (427)
T ss_pred -ccccCCCEEEEcCceeecCCCCcEEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh----HHHHHHHHH
Confidence 223456799999999998 589999999988 78888888877766677888999988888864 566777889
Q ss_pred HHHHHHHHHhccCCCC-cccCCC------------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-
Q 015768 296 RNREIIREALSPLGEG-AVKGGE------------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG- 355 (400)
Q Consensus 296 ~~~~~l~~~L~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~- 355 (400)
+++..+.+.|++++.+ ++..|. .|-.+.+.+........++++.| +=..+.+.-|....
T Consensus 299 ~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l-~l~~~~~slG~~~sl 377 (427)
T PRK07049 299 RNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNAL-QIFKLAVSLGGTESL 377 (427)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcC-cccEEcccCCCCCce
Confidence 9999999999988653 222221 13355556642111122333332 11122222222110
Q ss_pred ----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 356 ----------------------CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 356 ----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
.++.||||++. |+.+++++.|.++|.
T Consensus 378 i~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 425 (427)
T PRK07049 378 ASHPASMTHSGVPADVRERIGVLESTIRLSIGI---EHPDDLIADLAQALD 425 (427)
T ss_pred eeCCCccccccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 13579999997 677788888888886
No 169
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.1e-26 Score=210.22 Aligned_cols=327 Identities=21% Similarity=0.218 Sum_probs=259.5
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p 121 (400)
..+++|++++.+-. .+. .++....+.+.+.+.+...++.+. +-+++++++|.+++.++.++.+|||+|++...
T Consensus 15 ~v~~~V~~am~~~~----~~h--~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~n 88 (383)
T COG0075 15 PVPPRVLLAMARPM----VGH--RSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVN 88 (383)
T ss_pred CCCHHHHHHhcCCC----CCC--CCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeC
Confidence 34677777665543 222 344567777777788888888774 55666788999999999999999999999999
Q ss_pred Cccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768 122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (400)
Q Consensus 122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (400)
+.++ +.++++..|.+++.+ .. ++|-.++++++++.|+.++..++|.++|...+||+..| +++|+++|++||.+
T Consensus 89 G~FG~R~~~ia~~~g~~v~~~-~~-~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g~l 163 (383)
T COG0075 89 GKFGERFAEIAERYGAEVVVL-EV-EWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHGAL 163 (383)
T ss_pred ChHHHHHHHHHHHhCCceEEE-eC-CCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHcCCE
Confidence 8877 558999999999888 44 36678899999999997777899999999999999999 99999999999999
Q ss_pred EEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH----------------hh--
Q 015768 200 LVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK----------------VQ-- 261 (400)
Q Consensus 200 li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~----------------~~-- 261 (400)
+|+|.+.+ +++.+....+++.|+++.+..|+++.| ..+|.+..+ ++..+++.. ..
T Consensus 164 ~iVDaVsS---~Gg~~~~vd~wgiDv~itgSQK~l~~P-PGla~v~~S---~~a~e~~~~~~~~~~ylDL~~~~~~~~~~ 236 (383)
T COG0075 164 LIVDAVSS---LGGEPLKVDEWGIDVAITGSQKALGAP-PGLAFVAVS---ERALEAIEERKHPSFYLDLKKWLKYMEKK 236 (383)
T ss_pred EEEEeccc---CCCcccchhhcCccEEEecCchhccCC-CccceeEEC---HHHHHHHhcCCCCceeecHHHHHHHHhhc
Confidence 99999988 567777788889999999999999743 346777777 343333321 11
Q ss_pred ccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC--CCceEEEeeCCCCCCCHHHHHH
Q 015768 262 DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGAIYLWARLPEKHLDDFEVVR 338 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 338 (400)
..++++++....+++..+|+.- ++.++++.++++++.+.+++.++.+|+..+..+ .+.....+.+|.+. +..++..
T Consensus 237 ~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~-~~~~~~~ 315 (383)
T COG0075 237 GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGV-DDKKVRR 315 (383)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCC-CcHHHHH
Confidence 3567889999999999999862 255899999999999999999999988333322 22355667788765 4444555
Q ss_pred HHHHhcCeEEeCCCccCCCCeEEEEe-ccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 339 WLAHRHGVVVIPGGACGCRGHLRISF-GGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 339 ~l~~~~gi~v~~g~~~~~~~~iRi~~-~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+++++|+.+.+|........+||+. +..+.+++..++.+|..+++++-.
T Consensus 316 ~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 316 ALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred HHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 78888999999998877889999984 448999999999999999998754
No 170
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=7.7e-28 Score=225.38 Aligned_cols=311 Identities=16% Similarity=0.091 Sum_probs=222.9
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCC----CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh----cCCCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYG----ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL----CDAGD 114 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~----~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l----~~~gd 114 (400)
++|+++++++.+.+......... ......++.+.+.+.+++.+|.+++++++++|+|++++.++.++ .++||
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~ 89 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKK 89 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCC
Confidence 56789999998877542111110 11122445556666677777888899999999999988887665 46899
Q ss_pred EEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015768 115 SVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (400)
Q Consensus 115 ~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~ 191 (400)
+|++....|+++...+ +..|++++.+ |.+++ +.+|++++++.+++++ +++++++++|+||.+.| +++|.+
T Consensus 90 ~vl~~~~~h~s~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~i~~~t--~lv~v~~~~n~tG~~~~---l~~I~~ 162 (364)
T PLN02651 90 HVITTQTEHKCVLDSCRHLQQEGFEVTYL-PVKSD-GLVDLDELAAAIRPDT--ALVSVMAVNNEIGVIQP---VEEIGE 162 (364)
T ss_pred EEEEcccccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhcCCCc--EEEEEECCCCCceeccc---HHHHHH
Confidence 9999998998765443 4568898888 87654 4679999999998766 99999999999999999 889999
Q ss_pred HHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccC
Q 015768 192 LCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNI 264 (400)
Q Consensus 192 l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------~~~ 264 (400)
+|+++|+++++|++++.. ..+......+.++++.|.+|++| +..+|+++.++ +....+.... ...
T Consensus 163 ~~~~~g~~~~vD~a~~~g---~~~~~~~~~~~D~~~~s~hK~~g--p~G~g~l~v~~---~~~~~l~p~~~g~~~~~~~~ 234 (364)
T PLN02651 163 LCREKKVLFHTDAAQAVG---KIPVDVDDLGVDLMSISGHKIYG--PKGVGALYVRR---RPRVRLEPLMSGGGQERGRR 234 (364)
T ss_pred HHHHcCCEEEEEcchhhC---CcccCcccCCCCEEEechhhhCC--CCceEEEEEcC---CCCCCCCccccCCCccCCcc
Confidence 999999999999999843 23333445567899999999754 34578887774 2222221111 112
Q ss_pred CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCC-----CceEEEeeCCCCCCCHHHHHH
Q 015768 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGE-----GAIYLWARLPEKHLDDFEVVR 338 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 338 (400)
..+++.....++..+|+...+..+...++.+++.+++.+.|++ ++++++..+. ....+.+.++. .+.+++..
T Consensus 235 ~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~--~~~~~~~~ 312 (364)
T PLN02651 235 SGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY--VEGESLLM 312 (364)
T ss_pred CCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC--CCHHHHHH
Confidence 4567777777777777753334566778888889999999875 5555665541 12355556653 36778888
Q ss_pred HHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHH
Q 015768 339 WLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCK 373 (400)
Q Consensus 339 ~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~ 373 (400)
.|. + |.+..|..|.. .+.+|+|++. +|++|++
T Consensus 313 ~L~-~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 313 GLK-E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred HhC-C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 773 4 99998887632 2689999998 8998874
No 171
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.96 E-value=5.3e-27 Score=220.86 Aligned_cols=288 Identities=19% Similarity=0.182 Sum_probs=210.9
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEec
Q 015768 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVG 141 (400)
Q Consensus 66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~ 141 (400)
+.++..+++++++++. |. ++.++++|++.|+..++.+++++||+|+++.|.|...... ++..|++++.+
T Consensus 62 ~~p~~~~Le~~iA~~~----g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v- 134 (400)
T PRK06234 62 GNPTSTEVENKLALLE----GG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFV- 134 (400)
T ss_pred CCccHHHHHHHHHHHh----CC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEE-
Confidence 5677888999999887 42 4678899999999999999999999999999999775543 46789999888
Q ss_pred cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccccccCCCCcccc
Q 015768 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCV 219 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~ 219 (400)
+.. |++++++.+++++ ++|++++|+||+|.+.+ +++|.++|+++ |+++|+|++|..+.... ..
T Consensus 135 d~~------d~e~l~~~i~~~t--klI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~----~l 199 (400)
T PRK06234 135 DTS------NLEEVRNALKANT--KVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQR----PL 199 (400)
T ss_pred CCC------CHHHHHHHhccCC--eEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCC----ch
Confidence 542 7889999998766 99999999999999999 88889999997 99999999998665432 12
Q ss_pred CCCcEEEEeccccccCCCcce-eEEEEccCCcHHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768 220 EGDHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 296 (400)
Q Consensus 220 ~~~~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 296 (400)
..+.++++.|++|+++.+|.+ .||++++ ++++++++.. ....+...++...+.+...|+. +..++++..+
T Consensus 200 ~~g~Divv~S~sK~l~g~g~~~gG~v~~~---~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t----l~~r~~~~~~ 272 (400)
T PRK06234 200 QLGADVVVHSATKYLNGHGDVIAGFVVGK---EEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT----LQIRMEKHCK 272 (400)
T ss_pred hhCCcEEEeeccccccCCCCceeEEEEec---HHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHH
Confidence 335679999999999877765 5999988 6777777643 2233455677777666666654 5667777888
Q ss_pred HHHHHHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----
Q 015768 297 NREIIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---- 355 (400)
Q Consensus 297 ~~~~l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---- 355 (400)
+..++.+.|++++.+. +..| ..+-++.++++.......++.+.| +-.++.+.-|....
T Consensus 273 na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~ 351 (400)
T PRK06234 273 NAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNV-KLATLAVSLGDAETLIQH 351 (400)
T ss_pred HHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhC-CcceEeccCCCCCceecC
Confidence 8899999998876531 2111 123455667753221234555544 34454444443321
Q ss_pred -------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 356 -------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 356 -------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++.+|||++. |+.+++++.|++|+...
T Consensus 352 p~~~~~~~~~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 352 PASMTHSPYTAEERKEAGISDGLVRLSVGL---EDVDDIIADLKQALDLI 398 (400)
T ss_pred CccCCCCCCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHHHH
Confidence 13689999997 66778888888888764
No 172
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.96 E-value=7.6e-27 Score=217.34 Aligned_cols=318 Identities=13% Similarity=0.077 Sum_probs=224.1
Q ss_pred CCeEEcCCCCCCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 30 KNAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 30 ~~~i~~~~~~~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
+++|+-......+ .+|+++++++.++.++ |. +.+++++++++++++.+|. +++++++|+|+|+..++
T Consensus 8 ~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g~--~~~~~~~g~t~al~~al 77 (363)
T TIGR01437 8 KKVINASGKMTILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLGV--EDAVIVSSASAGIAQSV 77 (363)
T ss_pred ceEEECCcEeecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhCC--CeEEEEcCHHHHHHHHH
Confidence 4556655544332 3789999999998654 32 3568889999999888885 47899999999999999
Q ss_pred HHhcCCCC---------------EEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeE
Q 015768 107 LTLCDAGD---------------SVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167 (400)
Q Consensus 107 ~~l~~~gd---------------~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~ 167 (400)
.++.++|| +|+++.|.|..+ ...+...|++++++ +.+ +.+|++++++++++++ ++
T Consensus 78 ~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v-~~~---~~~d~~~le~ai~~~t--~a 151 (363)
T TIGR01437 78 AAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEA-GYA---NECSAEQLEAAITEKT--AA 151 (363)
T ss_pred HHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEE-cCC---CCCCHHHHHHhcChhc--eE
Confidence 99999998 899999877655 46778889999988 653 3589999999998877 76
Q ss_pred EE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEc
Q 015768 168 VS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 246 (400)
Q Consensus 168 v~-l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~ 246 (400)
++ +++++||+|.+.| +++|.++|++||+++|+|++|+.-. . .....+.+++++|+||++ +|++.|+++.
T Consensus 152 i~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~---~--~~~~~g~D~~~~S~~K~l--~gp~~G~l~~ 221 (363)
T TIGR01437 152 ILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDL---Q--KYYRLGADLVIYSGAKAI--EGPTSGLVLG 221 (363)
T ss_pred EEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCch---H--HHHHcCCCEEEEeCCccc--CCCceEEEEE
Confidence 65 5678999999999 7889999999999999999997211 1 111224578889999987 4677999988
Q ss_pred cCCcHHHHHHHHHhhccC-----CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC--Cc
Q 015768 247 PSEVEGFATQLLKVQDNI-----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE--GA 319 (400)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~ 319 (400)
+ +++++.+....... ..+.+..++.++...+.. +..+..+...++++.+++.|++++++.+..+. .+
T Consensus 222 ~---~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~---~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~ 295 (363)
T TIGR01437 222 K---KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLS---TGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAG 295 (363)
T ss_pred c---HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHc---cCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCC
Confidence 7 67777664322211 111223344444433332 12233334445677899999998775554211 11
Q ss_pred -----eEEEeeCCCCCCCHHHHHHHHHHhcC--eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 320 -----IYLWARLPEKHLDDFEVVRWLAHRHG--VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 320 -----~~~~~~~~~~~~~~~~~~~~l~~~~g--i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
..+.+.......+..++.++|. +++ |.+++ .+...+.+|+++..++++|++.++++|++.
T Consensus 296 ~~~~~~~v~~~~~~~g~~~~~l~~~L~-~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 296 RDIARAEIRFDESELGMTAADVVQALR-QGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred CcCceEEEEEeccCCCCCHHHHHHHHh-cCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 1222333222357889999874 566 66654 355688999999888899999999998775
No 173
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.4e-27 Score=210.48 Aligned_cols=343 Identities=17% Similarity=0.201 Sum_probs=249.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..|. +.++ .+|.+++++.+..++-+..+ ..-..+.+.++++.|.+..+ ..+.++|++|+++|++
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~s---n~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~E 114 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVS---NLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANE 114 (404)
T ss_pred CCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcc---cccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHH
Confidence 4578999998876 5554 79999999999887633111 11234566677777776655 5899999999999999
Q ss_pred HHHHHhcC----C-CCEEEEeCCCccchhHHHHhcCcEEEEe---ccCCCC----CCCCCHHHHHHhhccCCCCeEEEEe
Q 015768 104 NIVLTLCD----A-GDSVVMFAPYYFNSYMSFQMTGVTHILV---GPCSSK----TLHPDADWLEKTLETKPTPKLVSVV 171 (400)
Q Consensus 104 ~~~~~l~~----~-gd~vlv~~p~~~~~~~~~~~~g~~~~~~---~~~~~~----~~~~~~e~l~~~l~~~~~~~~v~l~ 171 (400)
.++....+ + ..+|+....+|++-....-..+.+..+- .|..+. .++ |++++++++++++ .+|+++
T Consensus 115 aAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~al~~ai~~~t--aAvivE 191 (404)
T COG4992 115 AALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEALEAAIDEDT--AAVIVE 191 (404)
T ss_pred HHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHHHHHHhccCe--EEEEEe
Confidence 99998752 2 2478888888877443332222222111 022111 122 8999999999866 999999
Q ss_pred CCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768 172 NPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250 (400)
Q Consensus 172 ~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~ 250 (400)
..+-..|++ .+.++++++.++|++||+++|.||++.++...|.-+.....+....+.++.|.+| +|+++|.++.+
T Consensus 192 PIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~Lg-GG~PigA~la~--- 267 (404)
T COG4992 192 PIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALG-GGFPIGAMLAT--- 267 (404)
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeecccc-CCccceeeEEc---
Confidence 889999986 5777899999999999999999999998876664332222232233457789998 88999999988
Q ss_pred HHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCceEEEeeC
Q 015768 251 EGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAIYLWARL 326 (400)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~ 326 (400)
+...+.+....+..+|+.|+++..++.+.|+.-. -++..++.++..++|.+.|+++ +.++-++.. |+++-+.+
T Consensus 268 ~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~--~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~-GLmiGiel 344 (404)
T COG4992 268 EEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL--EEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGR-GLMIGIEL 344 (404)
T ss_pred hhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc--chhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecc-eeEEEEEe
Confidence 5666777777788899999999999999988522 1345555666666666666653 434445555 77777777
Q ss_pred CCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 327 PEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 327 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
.... ....+...+. ++|+++.+. .++.+||.+.. ++++++++++++|.+++......
T Consensus 345 ~~~~-~a~~~~~~~~-~~gvL~~~a----~~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~~ 402 (404)
T COG4992 345 KEPY-RARDIVRALR-EEGVLVLPA----GPNVIRFLPPLVITEEEIDEALDALERALAAASAR 402 (404)
T ss_pred cCcc-cHHHHHHHHH-HCCeEEecC----CCCeEEecCCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 6532 4677787775 899999874 47799999988 89999999999999999987643
No 174
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.96 E-value=8.7e-27 Score=221.36 Aligned_cols=342 Identities=12% Similarity=0.094 Sum_probs=230.6
Q ss_pred hcCCCeEEcCCCCCCC--C-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVVYW--Q-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~--~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+.... + .+|++++++.+.+.+..... ... ..+..+.+++.+.+..+ .+.++++++|++|++
T Consensus 28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~--~~~-~~~~~~~~~~~l~~~~~--~~~~~~~~SGs~A~e 102 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTS--RAF-YNDVLGLAEKYITDLFG--YDKVLPMNSGAEAGE 102 (400)
T ss_pred CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccc--ccc-cCHHHHHHHHHHHhCCC--CCEEEEeCCcHHHHH
Confidence 4678899998876433 2 68999999999887532211 111 12345566666665555 368999999999999
Q ss_pred HHHHHhcC----------CCCEEEEeCCCccchhHHH-HhcCcEEEE--eccCCCCC---CCCCHHHHHHhhccCCCCeE
Q 015768 104 NIVLTLCD----------AGDSVVMFAPYYFNSYMSF-QMTGVTHIL--VGPCSSKT---LHPDADWLEKTLETKPTPKL 167 (400)
Q Consensus 104 ~~~~~l~~----------~gd~vlv~~p~~~~~~~~~-~~~g~~~~~--~~~~~~~~---~~~~~e~l~~~l~~~~~~~~ 167 (400)
.+++.+.. .+++|++.+.+|++..... ...+..... +.+..+.- ...|++++++.++. ..+++
T Consensus 103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~ 181 (400)
T PTZ00125 103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD-PNVAA 181 (400)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC-CCeEE
Confidence 99998741 3478999999988866433 222211100 00111100 01278999999862 23589
Q ss_pred EEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCCcceeEEE
Q 015768 168 VSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYI 244 (400)
Q Consensus 168 v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~G~i 244 (400)
|+++.++||+|.+.+ .+++++|.++|++||+++|+||+|..+...+...... ....+++ ++||+++.+++|+||+
T Consensus 182 v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~--~~sK~l~~g~~~ig~v 259 (400)
T PTZ00125 182 FIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV--LLGKALSGGLYPISAV 259 (400)
T ss_pred EEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE--EEcccccCCCcCcEEE
Confidence 998888999999886 5679999999999999999999998765544321111 1112333 4689997333599999
Q ss_pred EccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCce
Q 015768 245 AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAI 320 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~ 320 (400)
+.+ +++.+.+.......+++.+++.+.++.++|+...+ ....++..++.+.+++.|+++ +.+....+. +.
T Consensus 260 ~~~---~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~-g~ 333 (400)
T PTZ00125 260 LAN---DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE--EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGK-GL 333 (400)
T ss_pred EEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecc-cE
Confidence 998 78888876555555677888888888777764111 123344445556666656543 332333443 77
Q ss_pred EEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 321 YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 321 ~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+.++.++.. ..+..+++..|+ ++||.+.|+ ..+++||+++. .+++++++++++|.+++.++.
T Consensus 334 ~~~v~~~~~~~~~~~~~~~~l~-~~Gv~v~~~----~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 334 LNAIVFDHSDGVNAWDLCLKLK-ENGLLAKPT----HDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred EEEEEEccCcchHHHHHHHHHH-HCCeEEeec----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 777777631 224567888776 789999885 36799999865 799999999999999998864
No 175
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.96 E-value=8.1e-27 Score=221.45 Aligned_cols=331 Identities=14% Similarity=0.116 Sum_probs=230.1
Q ss_pred hcCCCeEEcCCCCCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+..... .+|++.+++.+.+.+...... . ...+...++++.+.+..+ .+.+++++++++|++
T Consensus 38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~--~-~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e 112 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR--A-FRNDQLAPLYEELAALTG--SHKVLPMNSGAEAVE 112 (401)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc--c-cCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHH
Confidence 45788999988764332 489999999999886432211 1 112344555555655545 368999999999999
Q ss_pred HHHHHhcC---------CC-CEEEEeCCCccchhHHHHhcCcE-------------EEEeccCCCCCCCCCHHHHHHhhc
Q 015768 104 NIVLTLCD---------AG-DSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 104 ~~~~~l~~---------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
.+++++.. +| ++|++...+|++....+...+.. +..+ | ..|++.+++.+.
T Consensus 113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~d~~~le~~i~ 185 (401)
T PRK00854 113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVV-P------FGDAEALEAAIT 185 (401)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEe-C------CCCHHHHHHHhC
Confidence 99999852 23 68899988888865444332221 1222 1 137899999987
Q ss_pred cCCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCC
Q 015768 161 TKPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 161 ~~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~ 237 (400)
+++ ++|++++|+||+|.+.+ .+++++|.++|++||+++|+||+|.++...+..... .....++++ ++|+++.+
T Consensus 186 ~~~--~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~--~~K~l~gg 261 (401)
T PRK00854 186 PNT--VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL--IGKALSGG 261 (401)
T ss_pred CCe--EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE--ecccccCC
Confidence 655 99999999999999887 556999999999999999999999866544321111 111123433 36999733
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc--cC
Q 015768 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV--KG 315 (400)
Q Consensus 238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~ 315 (400)
.+++|+++++ +++.+.+.......+++.+++.+.++.++|+...+ ....+.++++.+++.+.|++++...+ ..
T Consensus 262 ~~~ig~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 336 (401)
T PRK00854 262 FYPVSAVLSN---SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE--EGMIENAAEMGAYFLEGLRSIRSNIVREVR 336 (401)
T ss_pred ccCeEEEEEc---HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHhhccCceEEEe
Confidence 3799999998 77877776555556677899999999999875211 23567778888889998888654212 23
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
+. +.++.+.+.....+..++++.|. ++||.+.+. ..+++|++++. ++++++++++++|++++.
T Consensus 337 g~-g~~~~i~~~~~~~~~~~~~~~L~-~~GV~v~~~----~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 337 GR-GLMLAVELEPEAGGARQYCEALK-ERGLLAKDT----HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred cc-ceEEEEEEecCchhHHHHHHHHH-HCCeEEecC----CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 44 44444444222124677888886 689999753 35799999875 799999999999998874
No 176
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=2.1e-26 Score=210.43 Aligned_cols=332 Identities=19% Similarity=0.172 Sum_probs=246.8
Q ss_pred cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+++++++|++++ ..+..+|++++++.+.+.+...+.-++ ..|...+...+.+.+++.+| .+..++.+++..|+..
T Consensus 37 ~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--~e~al~f~SGy~AN~~ 114 (388)
T COG0156 37 DGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--AEAALLFSSGFVANLG 114 (388)
T ss_pred CCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--CCcEEEEcccchhHHH
Confidence 368899999987 777889999999999988732221111 24444444444444444446 3466777777799999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--C--CCeEEEEeCCCCCCccC
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--P--TPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~--~~~~v~l~~p~nptG~~ 180 (400)
++.+|++++|.|+...-.|.+..+.++..+++++.+ .. .|+++|++.+++. . ++++|+........|.+
T Consensus 115 ~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f-~H------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdi 187 (388)
T COG0156 115 LLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRF-KH------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDI 187 (388)
T ss_pred HHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEe-cC------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCc
Confidence 999999999999999999999999999999999888 43 3889999999741 1 24777777888899999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----ccccC-CCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
.| |.+|.+++++|+.++++||+|+.+.++... +.... .+.+++++|++|++|..| ||+.++ ..++
T Consensus 188 Ap---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~---~~~~ 258 (388)
T COG0156 188 AP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGS---AALI 258 (388)
T ss_pred CC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCc---HHHH
Confidence 99 999999999999999999999988876432 12222 455899999999998777 999999 7888
Q ss_pred HHHHHhhccC--CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC
Q 015768 255 TQLLKVQDNI--PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 332 (400)
Q Consensus 255 ~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (400)
+.+......+ +.+.++....++..+++.. +....++++++++...+++.++..+. .+.+.. ..++.+-+.+.. .
T Consensus 259 d~L~~~ar~~ifStalpP~~aaa~~~al~~l-~~~~~~r~~L~~~~~~~~~~~~~~~~-~~~~s~-s~I~pv~~gd~~-~ 334 (388)
T COG0156 259 DYLRNRARPFIFSTALPPAVAAAALAALRIL-EEGPERRERLQELAAFFRSLLKALGL-VLLPSE-SPIIPVILGDEE-R 334 (388)
T ss_pred HHHHHhCCceeccCCCCHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHhcCC-ccCCCC-CCeeeeEeCCHH-H
Confidence 8887654433 3445666666777777752 33467888899999999877766665 333333 455544554321 3
Q ss_pred HHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
..++...|+ +.||++.+..++. +...+|++++. +|++|++.+++.|.+.
T Consensus 335 a~~~s~~l~-~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 335 ALEASRALL-EEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHH-HCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 566777777 4599998776664 34689999998 9999999999888764
No 177
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=1.2e-26 Score=223.28 Aligned_cols=327 Identities=17% Similarity=0.179 Sum_probs=225.8
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHH---HHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALV---KKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~~~~~~a---~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
....++.|.+++..|..+.+....... ...|.+ +......++.++ +++++.+|++.+++++++|+|++++.+
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~---~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~ 145 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRSEF---YTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAA 145 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhchhH---HHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHH
Confidence 566778888777666665544432211 122333 011334555555 555888899888999999999999999
Q ss_pred HHHhc-CCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768 106 VLTLC-DAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 106 ~~~l~-~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~ 180 (400)
+.++. .+||+|+++++.|+++...++. .|++++.+ |.+++ .+|++++++.+++++ ++|++++| |+||.+
T Consensus 146 ~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~--~~d~~~l~~~i~~~t--~~v~l~~p-n~tG~v 219 (447)
T PRK00451 146 LMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEV-PYEDG--VTDLEALEAAVDDDT--AAVVVQYP-NFFGVI 219 (447)
T ss_pred HHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEe-cCCCC--CCCHHHHHHhcCCCe--EEEEEECC-CCCCee
Confidence 98885 7899999999999888877654 68999999 88764 789999999998765 99999998 899999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEE--cccccccccCCCCccccCCCcEEEEe---ccccccCCCcceeEEEEccCCcHHHHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVV--DNTYEYFMYDGRKHCCVEGDHVVNLF---SFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~--D~a~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
.+ +++|.++|+++|+++++ |.+.. +........+.+++++ +++|.++++|+++||++.+ +++++
T Consensus 220 ~~---l~~I~~~a~~~~~~~iv~~d~~~~-----g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~---~~~~~ 288 (447)
T PRK00451 220 ED---LEEIAEIAHAGGALFIVGVDPVSL-----GLLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATR---KKLVR 288 (447)
T ss_pred CC---HHHHHHHHHHCCCEEEEEcChHHh-----ccCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhh---HHHHh
Confidence 98 99999999999999998 54322 1111122345667777 4555566678899999888 66666
Q ss_pred HHH----------------------------HhhccCCcCccHHHH-HHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 256 QLL----------------------------KVQDNIPICASIISQ-HLALYSLQ-TGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 256 ~l~----------------------------~~~~~~~~~~~~~~~-~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
.+. ......+...+...+ .++..++. .+.+.+++..+++.++++++++.|
T Consensus 289 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L 368 (447)
T PRK00451 289 QMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERL 368 (447)
T ss_pred hCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
Confidence 531 011111111122222 33333333 234667888999999999999999
Q ss_pred ccCCCCcccCCCCceEE--EeeCCCCCCCHHHHHHHHHHhcCeEE-eCCCccC--CCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 306 SPLGEGAVKGGEGAIYL--WARLPEKHLDDFEVVRWLAHRHGVVV-IPGGACG--CRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 306 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~gi~v-~~g~~~~--~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
++++++.+. .+.++. .++++ .+..++.++|. ++||.. .++..+. ..+++|++++. +++++++++++.|
T Consensus 369 ~~~~g~~~~--~~~~~~~~~v~~~---~~~~~~~~~L~-~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L 442 (447)
T PRK00451 369 AEIGGVELF--DGPFFNEFVVRLP---KPAEEVNEALL-EKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAAL 442 (447)
T ss_pred hhcCCEEec--CCCeEEEEEEecC---CCHHHHHHHHH-hcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHH
Confidence 998765554 224443 35554 24678999886 677763 3444433 24689999985 7999999999999
Q ss_pred HHHH
Q 015768 380 RRGL 383 (400)
Q Consensus 380 ~~~l 383 (400)
++.+
T Consensus 443 ~~~~ 446 (447)
T PRK00451 443 GEVL 446 (447)
T ss_pred HHHh
Confidence 8754
No 178
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=8.6e-27 Score=219.07 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=234.3
Q ss_pred hcCCCeEEcCCCC--CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
.+|+.++||..+. ..++.+|++++++.+.+.+.. .+ +......+++++++.+. +.....+++++++++|+..
T Consensus 26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~---~~~~~~~~~~~SGseA~~~ 99 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIW--HS-PNLYLNSLQEEVAQKLI---GDKDYLAFFCNSGAEANEA 99 (375)
T ss_pred CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcC--cc-cCccCCHHHHHHHHHHh---cCcCCEEEEcCccHHHHHH
Confidence 4678899998763 556678999999999987632 12 22334667788888764 2122346889999999999
Q ss_pred HHHHhc--CCCCEEEEeCCCccchh-HHHHhcCcEEE------EeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768 105 IVLTLC--DAGDSVVMFAPYYFNSY-MSFQMTGVTHI------LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (400)
Q Consensus 105 ~~~~l~--~~gd~vlv~~p~~~~~~-~~~~~~g~~~~------~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n 175 (400)
+++... .++++|++.+.+|++.. ..+...|.... .+ +........|++++++.+.++ .++|++++++|
T Consensus 100 Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dl~~l~~~l~~~--~a~vi~e~v~~ 176 (375)
T PRK04260 100 AIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGV-PHFSYAIFNDLNSVKALVNKN--TAAVMLELVQG 176 (375)
T ss_pred HHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCC-CCeEEeCCCCHHHHHHhcCCC--eEEEEECCeEC
Confidence 988874 34578999988887744 44433332110 01 000000013789999888654 48899999999
Q ss_pred CCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768 176 PSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252 (400)
Q Consensus 176 ptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~ 252 (400)
++|... +.+.++++.++|+++|+++|+||+|.++...+..... .....+ +.||||.++ +|+|+||++.+ ++
T Consensus 177 ~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd--i~t~sK~l~-~G~~ig~~~~~---~~ 250 (375)
T PRK04260 177 ESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD--IFTLAKGLA-NGVPVGAMLAK---SS 250 (375)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC--EEEeccccc-CCcceEEEEEc---HH
Confidence 999874 5678999999999999999999999876554432211 111122 448999997 89999999999 77
Q ss_pred HHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC
Q 015768 253 FATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH 330 (400)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (400)
+.+.+.......+++.+++.+.++.++|+... ++.++.++.....++.+.+.+.+.+.+..... .++++|+.++.
T Consensus 251 ~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~-- 327 (375)
T PRK04260 251 LGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRG-LGYMIGIETTA-- 327 (375)
T ss_pred HHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec-cceEEEEEecC--
Confidence 77777654455677889999999999996532 44555556666666667666666643233323 48999999853
Q ss_pred CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 331 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 331 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+..++..++. ++||.+.|+ ..+.+|++++. ++++++++++++|++++
T Consensus 328 -~~~~~~~~l~-~~Gi~v~~~----~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 328 -DLSQLVEAAR-DKGLIVLTA----GTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred -cHHHHHHHHH-hCCCEEecC----CCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 4667888775 799999875 35789999966 89999999999998763
No 179
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.96 E-value=2.2e-26 Score=218.01 Aligned_cols=345 Identities=15% Similarity=0.132 Sum_probs=237.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+... .+.. ...+...++++.+.+..+ .+.+++++++++|++
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e 110 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWH--TGNG-YTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANE 110 (406)
T ss_pred CCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccc--ccCc-cCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHH
Confidence 5578899998863 3443 589999999999875311 1111 122334556666665543 479999999999999
Q ss_pred HHHHHhc--------CCCCEEEEeCCCccchhHHHHhcCcEEEE---eccCCCC---CCCCCHHHHHHhhccCCCCeEEE
Q 015768 104 NIVLTLC--------DAGDSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSK---TLHPDADWLEKTLETKPTPKLVS 169 (400)
Q Consensus 104 ~~~~~l~--------~~gd~vlv~~p~~~~~~~~~~~~g~~~~~---~~~~~~~---~~~~~~e~l~~~l~~~~~~~~v~ 169 (400)
.+++... .+..+|+..+++|++........+..... +.|..+. -...|++.+++.+.++ +++|+
T Consensus 111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aavi 188 (406)
T PRK12381 111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQ--TCAVI 188 (406)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCC--eeEEE
Confidence 9999863 13478999999999977544332221100 0011110 0123788999988654 47777
Q ss_pred EeCCCCCCccC--CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768 170 VVNPGNPSGTY--IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 170 l~~p~nptG~~--~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~ 247 (400)
++ |.+++|-+ .+.+.+++|.++|++||+++|+||+|.++...+........+...-+.+++|.+| +|+++||++.+
T Consensus 189 iE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~-gG~~ig~~~~~ 266 (406)
T PRK12381 189 VE-PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALG-GGFPIGAMLTT 266 (406)
T ss_pred Ee-CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhh-CCCceEEEEEc
Confidence 75 77877654 3789999999999999999999999987765553221111111112458999998 89999999998
Q ss_pred CCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-Cc-ccCC-CCceEEEe
Q 015768 248 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GA-VKGG-EGAIYLWA 324 (400)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~-~~~~-~~~~~~~~ 324 (400)
+++++.+.......+++.+++.+.++.+.|+... ..+..++++++.+++.+.|+++.. .. +... ..+.++++
T Consensus 267 ---~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~ 341 (406)
T PRK12381 267 ---EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN--TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGC 341 (406)
T ss_pred ---HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEE
Confidence 7888888765556678889999999888776421 235677788888888888877532 11 1112 23677788
Q ss_pred eCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccC
Q 015768 325 RLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDG 390 (400)
Q Consensus 325 ~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~ 390 (400)
.++... .....+...+ .++||.+.+. .++.+|++++. ++++++++++++|.+++.++..++
T Consensus 342 ~l~~~~~~~~~~~~~~l-~~~Gv~v~~~----g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 342 VLNAEYAGKAKQISQEA-AKAGVMVLIA----GPNVVRFAPALNISEEEITTGLDRFARACERFVSRG 404 (406)
T ss_pred EecCchhhHHHHHHHHH-HHCCcEEeeC----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 776421 1245666655 4899999763 35799999987 899999999999999999887664
No 180
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.96 E-value=9.4e-27 Score=219.85 Aligned_cols=341 Identities=16% Similarity=0.145 Sum_probs=231.1
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.... +.. ...+...++++.+.+..+ .+.++++++|++|++
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~--~~~-~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e 106 (397)
T TIGR03246 32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHI--GNG-YTNEPVLRLAKKLVDATF--ADKVFFCNSGAEANE 106 (397)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccc--cCc-cCCHHHHHHHHHHHhhCC--CCEEEEeCCcHHHHH
Confidence 4678999998863 4443 6999999999988763211 111 112344566666665544 469999999999999
Q ss_pred HHHHHhc-------CC-CCEEEEeCCCccchhHH-HHhcCcEEEE--eccCCCCC---CCCCHHHHHHhhccCCCCeEEE
Q 015768 104 NIVLTLC-------DA-GDSVVMFAPYYFNSYMS-FQMTGVTHIL--VGPCSSKT---LHPDADWLEKTLETKPTPKLVS 169 (400)
Q Consensus 104 ~~~~~l~-------~~-gd~vlv~~p~~~~~~~~-~~~~g~~~~~--~~~~~~~~---~~~~~e~l~~~l~~~~~~~~v~ 169 (400)
.+++.+. ++ .+.|+..+.+|++.... +...+..... +.|..+.- ...|++.+++.+.++ +++|+
T Consensus 107 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~aavi 184 (397)
T TIGR03246 107 AALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDK--TCAVI 184 (397)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccC--eEEEE
Confidence 9999873 12 36788888888886533 3333321000 00111000 012789999988754 48888
Q ss_pred EeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768 170 VVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 170 l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
++.++++.|... +.+++++|.++|++||+++|+||+|.++...+........+....+.+++|.+| +|+++|+++.+
T Consensus 185 ~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lg-gG~pigav~~~- 262 (397)
T TIGR03246 185 VEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALG-GGFPIGAMLTT- 262 (397)
T ss_pred EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhh-CCcceeEEEEc-
Confidence 886677777654 889999999999999999999999977754443221111121222347899997 79999999998
Q ss_pred CcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC----CcccCCCCceEEEe
Q 015768 249 EVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE----GAVKGGEGAIYLWA 324 (400)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~~~ 324 (400)
+++.+.+.......+++.+++.+.++.+.|+... .++..++++++.+++++.|+++.. +..+.+. +.++.+
T Consensus 263 --~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~-G~~~~i 337 (397)
T TIGR03246 263 --TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN--TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGK-GLLIGA 337 (397)
T ss_pred --HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecC-ceEEEE
Confidence 7888777654455677788899888888887421 245667778888888888877542 1222333 455555
Q ss_pred eCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 325 RLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 325 ~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+... ......++..|+ ++|+.+.+. +++++|++++. ++++++++++++|.+++.++
T Consensus 338 ~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 338 VLTEAYQGKAKQFVNAAA-EEGVIALIA----GPNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred EEcCchhhHHHHHHHHHH-HCCeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 55321 113567777775 789998763 24799998776 79999999999999998764
No 181
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=2.2e-26 Score=216.29 Aligned_cols=315 Identities=20% Similarity=0.194 Sum_probs=232.8
Q ss_pred CCcHHHHHHHHHhhcCCCC----CCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHh---cCCCC
Q 015768 43 QPPKMAMEKVKELVWDPSI----SKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTL---CDAGD 114 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~----~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l---~~~gd 114 (400)
+.|+.|++++.+.+.+... ..+.......++.+++.+.+++..|+++ ++|++++|+|.+++.++.++ .++||
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~ 89 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGD 89 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTC
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccccc
Confidence 5689999999888754211 1222222234555666666666669988 89999999999999999999 68999
Q ss_pred EEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 115 SVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 115 ~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
+|++....|++... ..+..|+++..+ +.+.++ .++++++++.+++++ +++++++.+|.+|...| +++|.
T Consensus 90 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i-~~~~~~-~~~~~~~~~~l~~~~--~lv~~~~~~~~tG~~~p---i~~I~ 162 (371)
T PF00266_consen 90 EVLVTSNEHPSNRYPWEEIAKRKGAEVRVI-PADPGG-SLDLEDLEEALNPDT--RLVSISHVENSTGVRNP---IEEIA 162 (371)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHTTEEEEEE-EEGTTS-SCSHHHHHHHHHTTE--SEEEEESBETTTTBBSS---HHHHH
T ss_pred ccccccccccccccccccccccchhhhccc-cccccc-hhhhhhhhhhhcccc--ceEEeecccccccEEee---eceeh
Confidence 99999999988773 334678999888 776655 679999999998665 99999999999999999 99999
Q ss_pred HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC------
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------ 264 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~------ 264 (400)
++|+++|+++++|.+++.. ..+......+.+++++|.+|..|.+ .+|++..+ ++..++++......
T Consensus 163 ~~~~~~~~~~~vD~~~~~g---~~~id~~~~~~D~~~~s~~Kl~gp~--G~g~l~v~---~~~~~~~~p~~~~~~~~~~~ 234 (371)
T PF00266_consen 163 KLAHEYGALLVVDAAQSAG---CVPIDLDELGADFLVFSSHKLGGPP--GLGFLYVR---PEAIERLRPAKPGGGYLDFP 234 (371)
T ss_dssp HHHHHTTSEEEEE-TTTTT---TSS--TTTTTESEEEEESTSTTSSS--TEEEEEEE---HHHHHHHHTSSSSSSTTTHH
T ss_pred hhhhccCCceeEechhccc---cccccccccccceeeecccccCCCC--chhhheeh---hhhhhccccccccccccccc
Confidence 9999999999999999943 3344445567789999999943434 47999988 77888775432211
Q ss_pred ---------------CcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCceEEEe
Q 015768 265 ---------------PICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWA 324 (400)
Q Consensus 265 ---------------~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~ 324 (400)
..+++.+...++..+++.. +...++..++..++.+++.+.|++++.+.+..+ ..+..+.+
T Consensus 235 ~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 314 (371)
T PF00266_consen 235 SLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSF 314 (371)
T ss_dssp HHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEE
T ss_pred cchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEE
Confidence 1256777777777777642 234567778889999999999999888666442 23455566
Q ss_pred eCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------CCCeEEEEecc-CCHHHHHHH
Q 015768 325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------CRGHLRISFGG-LVEDDCKAA 375 (400)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------~~~~iRi~~~~-~~~~~~~~~ 375 (400)
.++. .+...+..+|. ++||.+..|..+. ..+.+|+|++. +|++|++++
T Consensus 315 ~~~~--~~~~~~~~~L~-~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 315 NLPG--SDADDVVKYLE-ERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EETT--SSHHHHHHHHH-HHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eecC--CCHHHHHHHHh-hcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 6643 36788888776 5699999987765 35899999998 999998864
No 182
>PLN02242 methionine gamma-lyase
Probab=99.96 E-value=2.7e-26 Score=216.26 Aligned_cols=286 Identities=17% Similarity=0.176 Sum_probs=202.2
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH-----HhcCcEEEEecc
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF-----QMTGVTHILVGP 142 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~-----~~~g~~~~~~~~ 142 (400)
+...++++.++++. |. +.+++++|+++|+..++.+++++||+|+++.|.|.++...+ +..|++++.+ +
T Consensus 76 Pt~~~LE~~lA~l~----g~--~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~-d 148 (418)
T PLN02242 76 PTVLNLGRQMAALE----GT--EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV-D 148 (418)
T ss_pred hhHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc-C
Confidence 34455555555554 53 56788999999999999999999999999999998876654 3468787766 4
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 222 (400)
.+ |++.+++.++++ .+++|++++|+||||.+.+ +++|.++|++||+++|+|++|..+.+.. ...+
T Consensus 149 ~~------d~e~l~~~i~~~-~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~-----~~~g 213 (418)
T PLN02242 149 IT------DLEAVKKAVVPG-KTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP-----ARLG 213 (418)
T ss_pred CC------CHHHHHHhcCcC-CCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH-----HHcC
Confidence 32 789999998764 1399999999999999998 8999999999999999999998654421 1224
Q ss_pred cEEEEeccccccCCCcce-eEEEEccCCcHHHHHHHHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 223 HVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 223 ~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
.+++++|+||.++.+|.+ +||++.+ +++++.+...... ...+.+...+.++..++. .+.+..+++++.++++
T Consensus 214 ~divv~S~SK~l~g~g~~~gG~iv~~---~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~--l~tl~~r~~~~~~~a~ 288 (418)
T PLN02242 214 ADVVVHSISKFISGGADIIAGAVCGP---AELVNSMMDLHHGALMLLGPTMNPKVAFELSER--LPHLSLRMKEHCRRAM 288 (418)
T ss_pred CcEEEEeCccccCCCCCceEEEEEcC---HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHH
Confidence 679999999999877766 5999988 7888888766432 233444555566555554 2346677889999999
Q ss_pred HHHHHhccCCCCcccCCC-------------------CceEEEeeCCCCCCCHHHHHHHHHHhc----CeEEeCCCccC-
Q 015768 300 IIREALSPLGEGAVKGGE-------------------GAIYLWARLPEKHLDDFEVVRWLAHRH----GVVVIPGGACG- 355 (400)
Q Consensus 300 ~l~~~L~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~----gi~v~~g~~~~- 355 (400)
.+.+.|++++. .+..|. .|-.+.+.+.. .....++++.+. -. .+.+..|....
T Consensus 289 ~la~~L~~~~~-~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l~-~~~~~~~~~~slG~~~sl 365 (418)
T PLN02242 289 EYAKRMKELGL-KVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDT-EERANRLMRYLQ-NSTQFGFMAVSLGYYETL 365 (418)
T ss_pred HHHHHHHhCCC-EEECCCCCCCccHHHHHHhcccCCCceeEEEEEECC-HHHHHHHHHHhh-cccccceeeecCCCCCce
Confidence 99999998864 443221 23345556632 112344554442 11 22333333221
Q ss_pred ----------------------CCCeEEEEeccCCHH-HHHHHHHHHHHHHHHH
Q 015768 356 ----------------------CRGHLRISFGGLVED-DCKAAADRLRRGLEEL 386 (400)
Q Consensus 356 ----------------------~~~~iRi~~~~~~~~-~~~~~~~~l~~~l~~~ 386 (400)
.++.+|||++. | +.+++++.|++||..+
T Consensus 366 ~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl---E~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 366 MSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY---TGTLEQRWSQFEKALSAM 416 (418)
T ss_pred eeCCCccccccCCHHHHHhcCCCCCeEEEEecC---CCCHHHHHHHHHHHHHHh
Confidence 13579999997 5 4778899999999875
No 183
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=3.8e-26 Score=212.72 Aligned_cols=291 Identities=19% Similarity=0.157 Sum_probs=210.4
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP 142 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~ 142 (400)
.+....++++++++. | .+++++++|+++|+..++.++.++||+|+++.|+|.+....+ ...|++++.+ +
T Consensus 52 npt~~~Le~~lA~le----g--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~v-d 124 (388)
T PRK08861 52 NPNRGLLEQTLSELE----S--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFV-D 124 (388)
T ss_pred CchHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEE-C
Confidence 344566666666665 5 589999999999999999999999999999999998755433 3456787777 4
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 222 (400)
. .|++.+++.+++++ ++|++++|+||||.++| +++|.++|+++|+++|+|++|....+.. ....+
T Consensus 125 ~------~d~e~l~~~i~~~t--klV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~~----pl~~G 189 (388)
T PRK08861 125 Q------SDAAALDAALAKKP--KLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQK----PLELG 189 (388)
T ss_pred C------CCHHHHHHhcCcCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccCC----CcccC
Confidence 2 37889999887766 99999999999999999 7888999999999999999998654321 22346
Q ss_pred cEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 223 HVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 223 ~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
.++++.|++|+++. .+...|+++.++ +++.+++...+......++++..+.+...|+. +.-+++++.+++..+
T Consensus 190 aDivv~S~tK~l~G~~d~~gG~i~~~~--~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T----l~lR~~~~~~~a~~~ 263 (388)
T PRK08861 190 ADFVIHSTTKYINGHSDVIGGVLITKT--KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT----LGARMRVHEESAQQI 263 (388)
T ss_pred CCEEEeecceeccCCCcceeEEEEecH--HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC----HHHHHHHHHHHHHHH
Confidence 77999999999964 346789988764 67778787777666667788888877777776 677888999999999
Q ss_pred HHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc----------
Q 015768 302 REALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC---------- 354 (400)
Q Consensus 302 ~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~---------- 354 (400)
.+.|++++.+. |..| ..+-.+.+.+........++++.| +=..+.+.-|...
T Consensus 264 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l-~l~~~~~s~G~~~sl~~~p~~~~ 342 (388)
T PRK08861 264 LAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKAL-ALFSLAESLGGVESLICHPASMT 342 (388)
T ss_pred HHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcC-CcceEccCCCCCcceeeCCCccc
Confidence 99999887632 2222 123345566642111122333322 1112222222211
Q ss_pred ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+ .++.+|+|++. |+.+++++.|+++++.+.+.
T Consensus 343 h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~Dl~~al~~~~~~ 387 (388)
T PRK08861 343 HRAMGEEALAEAGVSQQLLRLSVGL---EDAQDLIADLDQAFAKAAEA 387 (388)
T ss_pred ccccCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHHhc
Confidence 0 13579999997 67778899999999887764
No 184
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.96 E-value=1.5e-25 Score=209.42 Aligned_cols=325 Identities=15% Similarity=0.142 Sum_probs=231.3
Q ss_pred CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCc----HHHHHHHHHHHHhhcCCCCCcEEEeCChHHH
Q 015768 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGL----PELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (400)
Q Consensus 29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~----~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a 101 (400)
++++++|++++ ..+..+|+++++..+++++...+.-+ ...|. .++++++++++ | .++.++++++..|
T Consensus 101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~----g--~e~all~sSGy~A 174 (476)
T PLN02955 101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK----K--KEDCLVCPTGFAA 174 (476)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH----C--CCcEEEECChHHH
Confidence 35789998876 88889999999999988774322111 12344 45555555555 5 5678888999999
Q ss_pred HHHHHHHh--------------cCCCCEEEEeCCCccchhHHHHhc----CcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768 102 FVNIVLTL--------------CDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (400)
Q Consensus 102 ~~~~~~~l--------------~~~gd~vlv~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~ 163 (400)
+..++.+| .+++|.|++..-.|.+..+.++.. +++++.+ +.+ |+++|++.++..+
T Consensus 175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f-~HN------D~~~Le~~L~~~~ 247 (476)
T PLN02955 175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVY-RHC------DMYHLNSLLSSCK 247 (476)
T ss_pred HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEe-CCC------CHHHHHHHHHhCC
Confidence 99999887 245678899999999999988776 5777777 432 8899999886322
Q ss_pred -CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----ccccCCCcEEEEeccccccCCC
Q 015768 164 -TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HCCVEGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 164 -~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~~~~~~~~i~~~s~sK~~g~~ 237 (400)
..++|++....++.|.+.| +.+|.++|++||+++|+||+|+.+..+... ......+.+++++|++|++|..
T Consensus 248 ~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~ 324 (476)
T PLN02955 248 MKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH 324 (476)
T ss_pred CCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc
Confidence 2356666667899999999 889999999999999999999987775421 1222357889999999999766
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCcC--ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315 (400)
Q Consensus 238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (400)
| |+++++ +++++.+........++ .+++...++.++++.... .+.++++++++.+++++.+ +. .+
T Consensus 325 G---Gfi~gs---~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~-~~~~r~~L~~n~~~fr~~~---G~-~~-- 391 (476)
T PLN02955 325 G---GFIACS---KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK-EKWRRKAIWERVKEFKALS---GV-DI-- 391 (476)
T ss_pred C---ceeecH---HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhc---CC-CC--
Confidence 6 999998 77888887655433333 344455555555553211 2356678888888888742 33 22
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+.++.+.+.... ...++.++|+ ++||++.+..++.- ...+||+++. ++++|++.+++.|.++....
T Consensus 392 --~sPI~pI~ig~~~-~a~~~~~~L~-~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 392 --SSPIISLVVGNQE-KALKASRYLL-KSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred --CCCEEEEEeCCHH-HHHHHHHHHH-HCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 1444444444321 3456677776 78999987766643 3479999988 99999999999998876554
No 185
>PLN00144 acetylornithine transaminase
Probab=99.96 E-value=7.1e-26 Score=212.14 Aligned_cols=338 Identities=17% Similarity=0.140 Sum_probs=231.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+... ++. ....+...++++.+.+.. +.+.+++++++++|++
T Consensus 12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~--~~~~v~f~~sGseA~e 86 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS--FADRVFFCNSGTEANE 86 (382)
T ss_pred CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC--CCCeEEEeCCcHHHHH
Confidence 4678999998875 3453 789999999999876321 111 112344556677666543 3578999999999999
Q ss_pred HHHHHhcC---------C------CCEEEEeCCCccchhHHHHhcCcEEE---EeccCCCCCC---CCCHHHHHHhhccC
Q 015768 104 NIVLTLCD---------A------GDSVVMFAPYYFNSYMSFQMTGVTHI---LVGPCSSKTL---HPDADWLEKTLETK 162 (400)
Q Consensus 104 ~~~~~l~~---------~------gd~vlv~~p~~~~~~~~~~~~g~~~~---~~~~~~~~~~---~~~~e~l~~~l~~~ 162 (400)
.+++.... + ..+|+....+|++............. .+.|..++.. ..|++.+++.+..+
T Consensus 87 ~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 166 (382)
T PLN00144 87 AAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKG 166 (382)
T ss_pred HHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCC
Confidence 99997631 1 25799999999887754433221100 0001111100 12688999888643
Q ss_pred CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCC
Q 015768 163 PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~ 237 (400)
.+++|+++..+||.|.. .+.+.+++|.++|++||+++|+||++.++...+... ....+| +.++||.++ +
T Consensus 167 -~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD----i~t~sK~l~-~ 240 (382)
T PLN00144 167 -KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD----IMTLAKPLA-G 240 (382)
T ss_pred -CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC----EEEeccccc-C
Confidence 36888888668885553 466679999999999999999999999886655322 122233 668899997 8
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKG 315 (400)
Q Consensus 238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (400)
|+++|+++.+ +++.+.+.......+++.+++.+.++.+.|+.- .+...+..+.-....+.+.+.+.+.+.+.-+.
T Consensus 241 G~pig~v~~~---~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vr 317 (382)
T PLN00144 241 GLPIGAVLVT---EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVR 317 (382)
T ss_pred CcceEEEEEc---HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCceeee
Confidence 9999999999 788887765556678889999999988655431 12222222222333444555555554422222
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
. .|+++|+.+.. ....+...+. ++||.+.|+. ..+.+|++++. .+++++++++++|.+++.++
T Consensus 318 g-~G~~~~l~l~~---~~~~~~~~~~-~~Gv~i~~~~---~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 318 G-VGLLVGIQLDV---PAGPLVDACR-DSGLLVLTAG---KGDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred c-CceEEEEEecC---ccHHHHHHHH-HCCeEEeecC---CCCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 3 58999999842 3567777665 8999998863 24899999998 89999999999999999764
No 186
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=5.4e-26 Score=199.95 Aligned_cols=353 Identities=22% Similarity=0.228 Sum_probs=258.8
Q ss_pred chHHHHHHHHHhcC--CCeEEcCCCC--CCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc--C
Q 015768 16 MPIMVQIQELVRGA--KNAVSLAQGV--VYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--K 86 (400)
Q Consensus 16 ~~~~~~~~~~~~~~--~~~i~~~~~~--~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~--~ 86 (400)
......+.+.|..+ ++.|+++.|. ...+ .-+.|.+|-...+.+.....|-+..|.+.+.+++++.+.... -
T Consensus 10 ~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~llFG~d~~~ 89 (396)
T COG1448 10 ADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSPA 89 (396)
T ss_pred CCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHhcCCCcHH
Confidence 33445556666443 5599999986 3332 234555555555555556789899999999999999874211 0
Q ss_pred CCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 87 LYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 87 ~~~~~i--~~~~g~t~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
+..+++ +=|.|||.|+..+..-+. .|..+|++++|+|+++..++...|.++..+.-.|..+..+|.+.+.+.|+.-
T Consensus 90 l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a 169 (396)
T COG1448 90 LAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA 169 (396)
T ss_pred HHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC
Confidence 223343 447899999999998885 4667899999999999999999999998883345555568988888888744
Q ss_pred CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc------cccCCCcEEEEeccccccC
Q 015768 163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH------CCVEGDHVVNLFSFSKAYG 235 (400)
Q Consensus 163 ~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~------~~~~~~~~i~~~s~sK~~g 235 (400)
+...+|++- ++|||||.-++.+++.+|+++.++.+.+.++|-+|.+|..+...- ........++..|+||.||
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfg 249 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFG 249 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence 333566665 569999999999999999999999999999999999887653211 1112334788999999999
Q ss_pred CCcceeEEEEccCCcHHHHHH----HHHhhccCCcCccHHHHHHHHHHhcCCc------HHHHHHHHHHHHHHHHHHHHh
Q 015768 236 MMGWRVGYIAYPSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTGP------EWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~l~~~L 305 (400)
+-|-|+|.+..-..+++...+ +....+....+++..+...+...|...+ ..+..++.++.+++..|++.|
T Consensus 250 LYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L 329 (396)
T COG1448 250 LYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDAL 329 (396)
T ss_pred hhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999984322211454444 3334444455677777777777777622 335778899999999999999
Q ss_pred ccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 306 SPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 306 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
+..+. +..+..+.|||.+..+. . +.+.+|.+++||++.... |+|++.+++..++..++.+.++
T Consensus 330 ~~~~~~~~f~~i~~Q~GMFsy~Gls-----~-~QV~rLree~~IY~v~sG--------Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 330 KALGAPRNFDFIISQRGMFSYTGLS-----P-EQVDRLREEFGIYLVASG--------RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HhhCCCcccchHhhcCceeecCCCC-----H-HHHHHHHHhccEEEecCC--------eeeeccCChhhHHHHHHHHHhh
Confidence 98432 45666777999987664 3 445668889999998655 9999998999999998888775
No 187
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.96 E-value=4.3e-26 Score=212.70 Aligned_cols=283 Identities=17% Similarity=0.212 Sum_probs=202.4
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCC
Q 015768 69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCS 144 (400)
Q Consensus 69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~ 144 (400)
....+++.++++. |.+. .++++|+++++..++ .+.++||+|+++.|.|++... .++..|++++.+ +.
T Consensus 53 t~~~le~~la~l~----g~~~--~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~- 123 (366)
T PRK08247 53 TRGVLEQAIADLE----GGDQ--GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYV-NT- 123 (366)
T ss_pred hHHHHHHHHHHHh----CCCc--EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEE-CC-
Confidence 3445555555554 6543 477888899999876 577899999999999988544 445689998888 54
Q ss_pred CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV 224 (400)
Q Consensus 145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 224 (400)
.|++.+++.+++++ ++|++++|+||+|...+ +++|.++|++||+++|+|++|....... ....+.+
T Consensus 124 -----~d~~~l~~~i~~~t--klv~le~P~NP~~~~~d---l~~I~~la~~~g~~lIvD~t~~~~~~~~----p~~~g~d 189 (366)
T PRK08247 124 -----ASLKAIEQAITPNT--KAIFIETPTNPLMQETD---IAAIAKIAKKHGLLLIVDNTFYTPVLQR----PLEEGAD 189 (366)
T ss_pred -----CCHHHHHHhcccCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCccccccC----chhcCCc
Confidence 27889999988765 99999999999876655 9999999999999999999996433221 1234577
Q ss_pred EEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768 225 VNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 225 i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 303 (400)
+++.|+||.++. ++++.|+++.++ +++.+++...+.......+++.++.+...++. +..++++++++++.+.+
T Consensus 190 i~i~S~sK~~~g~~d~~~G~iv~~~--~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t----l~~r~~~~~~~a~~l~~ 263 (366)
T PRK08247 190 IVIHSATKYLGGHNDVLAGLVVAKG--QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----LALRMRQHEENAKAIAA 263 (366)
T ss_pred EEEeecceeccCCCceeeeEEecCh--HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc----HHHHHHHHHHHHHHHHH
Confidence 999999999963 356899999874 57777777666655566777777777777664 45667778999999999
Q ss_pred HhccCCCCc-ccCC-CCceEEEeeCCCCCCCHHHHHHHH---------HHhcCeEEeCCCccC-------------CCCe
Q 015768 304 ALSPLGEGA-VKGG-EGAIYLWARLPEKHLDDFEVVRWL---------AHRHGVVVIPGGACG-------------CRGH 359 (400)
Q Consensus 304 ~L~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~gi~v~~g~~~~-------------~~~~ 359 (400)
.|++++.+. +..| .++++.| .+.. .....++.+.+ .....+.+.|+..++ .++.
T Consensus 264 ~L~~~p~v~~v~~P~~gg~~sf-~~~~-~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~ 341 (366)
T PRK08247 264 FLNEQPGVTDVLYPGRGGMLSF-RLQD-EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRL 341 (366)
T ss_pred HHHhCCCeeEEecCCcCcEEEE-EECC-HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCe
Confidence 999987644 4444 6677666 5642 10112222211 112334555664331 1458
Q ss_pred EEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 360 LRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 360 iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+|||++. |+.+++++.|.+|+..
T Consensus 342 ~R~svGl---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 342 LRFSVGI---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred EEEEecc---CCHHHHHHHHHHHHhh
Confidence 9999997 6777888889888875
No 188
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.96 E-value=9.1e-26 Score=213.94 Aligned_cols=346 Identities=13% Similarity=0.099 Sum_probs=232.5
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.....+. ....+...++++.+.+.... ..+.++|++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~ 114 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQ--IVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAV 114 (421)
T ss_pred CCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccccc--ccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHH
Confidence 5678899998875 3443 6899999999998874322221 11223345666666655432 246899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCcE-------------EEEeccCCCC--CC--CCCHHHHHHhhcc-
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGVT-------------HILVGPCSSK--TL--HPDADWLEKTLET- 161 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~--~~--~~~~e~l~~~l~~- 161 (400)
+.+++... ....+|+....+|++....... .+.. +..+ |..+. +. ..+++.+++.+..
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK06777 115 ENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHA-LYPNELHGVSVEEALSSVERLFKAD 193 (421)
T ss_pred HHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEc-CCCccccCcCHHHHHHHHHHHHHhc
Confidence 99999764 2336799999999997754432 2210 1111 11111 00 1135667777752
Q ss_pred --CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768 162 --KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 162 --~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 238 (400)
...+.+|+++..++..|. +++.+++++|.++|++||+++|+||+|.++...+........+....+.++||.++ +|
T Consensus 194 ~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~-~G 272 (421)
T PRK06777 194 IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLG-GG 272 (421)
T ss_pred cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhc-CC
Confidence 233678888876888886 68999999999999999999999999998766553222111121111337899998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCccc
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVK 314 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~ 314 (400)
+|+||++.+ +++++.+.......+++.+++.+.++.+.|+..++ ++..++.+++.+++++.|+++ +.+..+
T Consensus 273 ~pigav~~~---~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 347 (421)
T PRK06777 273 MPISAVVGR---AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE--EKLCQRALILGAHLVEVLEKAKASCPAIVDI 347 (421)
T ss_pred CceEEEEEc---HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Confidence 999999998 78888776655667888999999999999974222 355666777777777777653 444445
Q ss_pred CCCCceEEE-eeCCCCCCCH----HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLW-ARLPEKHLDD----FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 315 ~~~~~~~~~-~~~~~~~~~~----~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
.+.+.++.+ +..+....+. ..+...++ ++||.+.|+..+ .+++||.+.. .+++++++++++|.+++.
T Consensus 348 rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~~~~--g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 348 RARGSMVAVEFNDPQTGKPSPEFTRQYQRQAL-EEGLLLLSCGVH--GNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred cCceEEEEEEEecCccCCccHHHHHHHHHHHH-hCCeEEeecCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 666555543 3222111112 23333344 799999997654 3799999875 799999999999999874
No 189
>PRK07505 hypothetical protein; Provisional
Probab=99.95 E-value=3.7e-25 Score=209.88 Aligned_cols=332 Identities=16% Similarity=0.151 Sum_probs=212.5
Q ss_pred hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC-CCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-ISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~-~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||++.. ..+..+|++++++.+.+.+.. ....+ ......+..+++++.+.+..+. +.++++++++|+.
T Consensus 43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a~~ 119 (402)
T PRK07505 43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA---SVLTFTSCSAAHL 119 (402)
T ss_pred cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC---CEEEECChHHHHH
Confidence 5578899997653 333678999999999887521 11111 1112244556666666666564 4555556678888
Q ss_pred HHHHHhc----CCCC-EEEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768 104 NIVLTLC----DAGD-SVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (400)
Q Consensus 104 ~~~~~l~----~~gd-~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n 175 (400)
.++..+. .+|+ .|++.+..|++.. ......+.+++.+ |. .|++.+++.+++++ +++++++|+|
T Consensus 120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~-~~------~d~~~l~~~~~~~~--~~~vl~~p~~ 190 (402)
T PRK07505 120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETI-DH------NDLDALEDICKTNK--TVAYVADGVY 190 (402)
T ss_pred HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEe-CC------CCHHHHHHHHhcCC--CEEEEEeccc
Confidence 8876543 2232 3556665554432 1222345677777 54 27889999887655 8899999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCC----cccc-CCCcEEEEeccccccCCCcceeEEEEccC
Q 015768 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRK----HCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~----~~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
|+|.+.+ +++|.++|++||+++|+||+|+...++ +.. .... .++.+++++|+||.+|.+| ||++..+
T Consensus 191 ~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~ 264 (402)
T PRK07505 191 SMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGD 264 (402)
T ss_pred ccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCC
Confidence 9999999 888889999999999999998643332 211 1122 3567899999999998665 8876543
Q ss_pred CcHHHHHHHHHhhccCCc--CccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEee
Q 015768 249 EVEGFATQLLKVQDNIPI--CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325 (400)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 325 (400)
+++.+.+.......++ ++++++..++...++. ..+++.+..+.++++...+.+.+... . .....++.++.
T Consensus 265 --~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~-~g~~~~i~~~~ 337 (402)
T PRK07505 265 --AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----Q-SGSFLPIRLIY 337 (402)
T ss_pred --HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----C-CCCCCCEEEEE
Confidence 7888888765554444 3455677777777662 12334444444544444433322111 1 11212333333
Q ss_pred CCCCCCCHHHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
++.. ....++...|+ ++||.+.++..+. .++++||+++. .+++++++++++|++++.+
T Consensus 338 ~~~~-~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 338 IGDE-DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred eCCH-HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 3321 13567888776 7899999875443 23689999986 7999999999999998764
No 190
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.95 E-value=7.7e-26 Score=212.35 Aligned_cols=287 Identities=18% Similarity=0.157 Sum_probs=203.4
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEec
Q 015768 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG 141 (400)
Q Consensus 66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~ 141 (400)
+.+....+++.++++. |. ++.+++++++.++..++.++.++||+|+++.|.|.+....+ +..|+++..+
T Consensus 59 ~~pt~~~Le~~lA~l~----G~--~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~- 131 (386)
T PRK06767 59 GNPTVKLFEERMAVLE----GG--EEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFC- 131 (386)
T ss_pred CCcchHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEe-
Confidence 3444666777777766 53 34566677788999999999999999999999997766544 3346665555
Q ss_pred cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC
Q 015768 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG 221 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 221 (400)
+. .+++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....... + ...
T Consensus 132 ~~------~d~~~l~~~i~~~t--klV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~-p---l~~ 196 (386)
T PRK06767 132 DM------ETEADIENKIRPNT--KLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQR-P---LEL 196 (386)
T ss_pred CC------CCHHHHHHhhCcCc--eEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccCC-c---hhc
Confidence 32 27889999887765 99999999999999999 8888999999999999999997443321 1 233
Q ss_pred CcEEEEeccccccCCCcce-eEEEEccCCcHHHHHHH-HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 222 DHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQL-LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 222 ~~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
+.++++.|++|.++.+|.+ .|+++++ ++.++++ ...+......++++.++++...|+. +..++++.++++.
T Consensus 197 g~Div~~S~sK~l~g~g~~~gG~v~~~---~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t----l~~r~~~~~~~a~ 269 (386)
T PRK06767 197 GCDAVVHSATKYIGGHGDVVAGVTICK---TRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT----LAVRMDRHCDNAE 269 (386)
T ss_pred CCcEEEecCcceecCCCCceeEEEEeC---hHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHH
Confidence 5578899999999867777 4899888 5655554 3333322333466665655555543 5667788899999
Q ss_pred HHHHHhccCCCCc-ccCC----------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-------------
Q 015768 300 IIREALSPLGEGA-VKGG----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------------- 355 (400)
Q Consensus 300 ~l~~~L~~~~~~~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------------- 355 (400)
.+.+.|++++.+. +..| ..+..+.+.++....+..++.+.| +..++.+.-|....
T Consensus 270 ~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~~~~~ 348 (386)
T PRK06767 270 KIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDL-HFITIAVSLGDTETLIQHPATMTHAAI 348 (386)
T ss_pred HHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhC-CccEEecCCCCcCccccCCCccccccC
Confidence 9999999988754 2222 123455666653222456777766 46777776664331
Q ss_pred ----------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 356 ----------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 356 ----------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.++.+|||++. |+.+++++.|.+++..
T Consensus 349 ~~~~~~~~gi~~~l~R~svGl---E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 349 PAELRQEMGIYDNLIRLSVGL---ESWEDIVSDLEQALKK 385 (386)
T ss_pred CHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 13579999997 6677888888888864
No 191
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.95 E-value=5.1e-26 Score=216.14 Aligned_cols=347 Identities=12% Similarity=0.043 Sum_probs=226.9
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+.....+. ....+.+.++++.|.+... ...+.++|++++++|+
T Consensus 30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~ 107 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFM--VTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAV 107 (420)
T ss_pred CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcccc--ccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence 5688999998875 4443 6899999999998864322221 1122334456666655442 1236899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-C--------c-----EEEEeccCCC--C--------CCCCCHHHHH
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G--------V-----THILVGPCSS--K--------TLHPDADWLE 156 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g--------~-----~~~~~~~~~~--~--------~~~~~~e~l~ 156 (400)
+.+++... ....+|+....+|++........ + . .+..+ |... . .++-+++.++
T Consensus 108 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (420)
T TIGR00700 108 ENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRA-PLPYPYRDGLLDKQLSTDGELAAAR 186 (420)
T ss_pred HHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEe-CCCccccccccccchhHHHHHHHHH
Confidence 99998764 23367999999998876443321 1 1 11112 2110 0 0001245666
Q ss_pred Hhhc---cCCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccc
Q 015768 157 KTLE---TKPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSK 232 (400)
Q Consensus 157 ~~l~---~~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK 232 (400)
+.+. ....+.+|+++..+..+|..+ +.+++++|.++|++||+++|+||+|.++...+........+....+.++||
T Consensus 187 ~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK 266 (420)
T TIGR00700 187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAK 266 (420)
T ss_pred HHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeec
Confidence 6653 233468888886677788755 666699999999999999999999998876553222122222233456899
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768 233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGE 310 (400)
Q Consensus 233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (400)
.++ +|+|+||++.+ +++.+.+.......+++.+++++.++.+.|+.. .+..++..+.-.+.++.+.+..+.++.
T Consensus 267 ~l~-~G~pig~v~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~ 342 (420)
T TIGR00700 267 SLA-DGLPLSGVTGR---AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPR 342 (420)
T ss_pred ccc-CCcceEEEEec---HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 998 89999999999 788887765556678889999999997777631 122222222223334444443344454
Q ss_pred CcccCCCCceEEEeeCCCC--CC-C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 311 GAVKGGEGAIYLWARLPEK--HL-D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~--~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+..+.+. |.+.++.+... .. + ...+...+ .++||.+.|+..| .+++||+++. .+++++++++++|.+++
T Consensus 343 ~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f--~~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 343 IGDVRGL-GAMIAVELVDPGTTEPDAGLAERIATAA-HAAGLLLLTCGMF--GNIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred EEEeecc-ceEEEEEEecCCCCCccHHHHHHHHHHH-HHCCeEEeccCCC--CCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 4445555 77777766321 00 1 23444444 4899999998765 3799999876 79999999999999987
Q ss_pred H
Q 015768 384 E 384 (400)
Q Consensus 384 ~ 384 (400)
.
T Consensus 419 ~ 419 (420)
T TIGR00700 419 A 419 (420)
T ss_pred h
Confidence 4
No 192
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.2e-25 Score=211.33 Aligned_cols=292 Identities=22% Similarity=0.155 Sum_probs=200.5
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~ 143 (400)
.+.+...+.+++.+++..|. .+ .++++++++++..++.++.++||+|+++.|+|.+.. ..++..|.+++.+ +.
T Consensus 56 R~~~p~~~~Le~~lA~l~g~-~~-~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v-~~ 132 (405)
T PRK08776 56 RSGNPTRDLLGEALAELEGG-AG-GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITA-DL 132 (405)
T ss_pred CCCChHHHHHHHHHHHHhCC-Cc-eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEE-CC
Confidence 33344445555555555564 23 456666789999999999999999999999998743 3345567888877 53
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
.|.+.+++.+++++ |+|++++|+||+|.+.+ +++|.++|+++|+++|+|++|..... ......+.
T Consensus 133 ------~d~~~l~~~i~~~t--klV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~~----~~pl~~ga 197 (405)
T PRK08776 133 ------TDPRSLADALAQSP--KLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPAL----QKPLEFGA 197 (405)
T ss_pred ------CCHHHHHHhcCcCC--eEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCccccc----CCcccccC
Confidence 27888999887655 99999999999999988 89999999999999999999975322 11223455
Q ss_pred EEEEeccccccCCC-cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMM-GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 224 ~i~~~s~sK~~g~~-g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
++++.|.+|.++.+ ++..|+++.++ +++.+++..........++++..+++...+ ++++.+++++.+++..+.
T Consensus 198 Divv~S~tK~l~g~~~~~~G~vv~~~--~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl----~tl~~r~~~~~~na~~la 271 (405)
T PRK08776 198 DLVLHSTTKYINGHSDVVGGAVVARD--AELHQQLVWWANALGLTGSPFDAFLTLRGL----RTLDARLRVHQENADAIA 271 (405)
T ss_pred CEEEecCceeecCCCCceEEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhh----CcHHHHHHHHHHHHHHHH
Confidence 69999999999644 56789988765 678888876665555567777777766555 457888999999999999
Q ss_pred HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----------
Q 015768 303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----------- 354 (400)
Q Consensus 303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----------- 354 (400)
+.|++++.+. +..| ..+-.+.+.+........++++.|. =..+.+.-|...
T Consensus 272 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-l~~~~~s~G~~~sl~~~p~~~~h 350 (405)
T PRK08776 272 ALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLR-YFTLAESLGGVESLIAHPASMTH 350 (405)
T ss_pred HHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCC-cceEccCCCCCceEEECCccccc
Confidence 9999887532 2111 1234555666532111223333321 111122222211
Q ss_pred -----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 355 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 355 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+ .++.+|||++. |+.+++++.|++++....
T Consensus 351 ~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~~~ 392 (405)
T PRK08776 351 AAMTAEARAAAGISDGLLRLSVGI---ESAEDLLIDLRAGLARAE 392 (405)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHhH
Confidence 0 13579999997 566677777777777643
No 193
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=8.7e-26 Score=211.05 Aligned_cols=289 Identities=22% Similarity=0.185 Sum_probs=207.6
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~ 143 (400)
+....+++.++++. |. +++++++|+++++..++.++.++||+|+++.|+|++....+. ..|.++..+ +
T Consensus 52 pt~~~L~~~lA~l~----g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~v-d- 123 (386)
T PRK08045 52 PTRDVVQRALAELE----GG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV-D- 123 (386)
T ss_pred ccHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEe-C-
Confidence 34556666666654 53 469999999999999999999999999999999987554433 234466555 3
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
..|++.+++.+++++ ++|++++|+||||.++| +++|.++|+++|+++|+|++|..+.... ....+.
T Consensus 124 -----~~d~e~l~~~l~~~t--klV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~~----pl~~ga 189 (386)
T PRK08045 124 -----QGDEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQN----PLALGA 189 (386)
T ss_pred -----CCCHHHHHHhcccCC--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccCC----chhhCC
Confidence 247889999887765 99999999999999999 8888889999999999999998654321 223345
Q ss_pred EEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 224 ~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
++++.|++|+++ .++...|+++..+ +++.+++.........+.+++.++.+...|+. +..+++++.+++..+.
T Consensus 190 Divv~S~tK~l~G~~d~~~G~vi~~~--~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t----l~~R~~~~~~na~~la 263 (386)
T PRK08045 190 DLVLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAIV 263 (386)
T ss_pred CEEEeecceeccCCCCceeEEEEeCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----HHHHHHHHHHHHHHHH
Confidence 699999999995 4567789987754 67888887666666777899999988888876 6788899999999999
Q ss_pred HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----------
Q 015768 303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----------- 354 (400)
Q Consensus 303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----------- 354 (400)
+.|++++.+. +..| ..|-.+.+.+........++++.| +=..+.+.-|...
T Consensus 264 ~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~~~ 342 (386)
T PRK08045 264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGL-SLFTLAESLGGVESLISHAATMTH 342 (386)
T ss_pred HHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhc-cceeEeccCCCCceeEeCCCCccc
Confidence 9999887632 2211 113345556643211123344433 1122222222211
Q ss_pred -----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 355 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 355 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+ .++.+|+|++. |+.+++++.|.++++...+
T Consensus 343 ~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~~ 385 (386)
T PRK08045 343 AGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAANK 385 (386)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHHHhhc
Confidence 0 14689999997 6677888889998886543
No 194
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.95 E-value=5.2e-26 Score=217.15 Aligned_cols=336 Identities=20% Similarity=0.175 Sum_probs=228.3
Q ss_pred hcCCCeEEcCCCCCC--C-CCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGVVY--W-QPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~--~-~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..|... + ..+|++++++.+.+.+.. .|. +..+..++++++++++. ..+++++++|+++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~-----~~~~v~~~~sGseA~ 117 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVP-----SVEMVRFVNSGTEAT 117 (423)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCC-----cccEEEEeCCHHHHH
Confidence 457889999888633 3 378999999999998753 233 44456677777777652 136899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHh---cCcEEEEeccCCC---C-----CC---CCCHHHHHHhhccC-CCC
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM---TGVTHILVGPCSS---K-----TL---HPDADWLEKTLETK-PTP 165 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~---~-----~~---~~~~e~l~~~l~~~-~~~ 165 (400)
+.+++... ...++|+...++|+++...+.. .+...... |..+ . .. ..|++++++.+... ..+
T Consensus 118 e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~ 196 (423)
T TIGR00713 118 MSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGL-PTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEI 196 (423)
T ss_pred HHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCC-CCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcE
Confidence 99998754 2458999999999997643332 11111111 1100 0 00 01788999888632 235
Q ss_pred eEEEEe-CCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCC---ccccCCCcEEEEeccccccCCCcce
Q 015768 166 KLVSVV-NPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVEGDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 166 ~~v~l~-~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~g~~ 240 (400)
++|+++ .++| +|.+.+ .+++++|.++|++||+++|+||+|.++..+... .....+ + +.++||.++ +|+|
T Consensus 197 aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~p--D--i~t~sK~l~-~G~p 270 (423)
T TIGR00713 197 AGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEP--D--LTTLGKIIG-GGLP 270 (423)
T ss_pred EEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCc--c--hhhhhhhhc-CCCc
Confidence 788887 5667 788776 689999999999999999999999877543211 111122 2 347999998 8999
Q ss_pred eEEEEccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768 241 VGYIAYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKG 315 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (400)
+||++++ +++++.+.. .....+++.+++.+.++.++|+.. .++..+..+....+++.+.+.+++++......
T Consensus 271 ig~v~~~---~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~ 347 (423)
T TIGR00713 271 VGAFGGR---REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVN 347 (423)
T ss_pred eeeeeEH---HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 9999999 788888763 223457788999999988888742 23455666666666777777777776532233
Q ss_pred CCCceE-EEeeCCCCC-------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 316 GEGAIY-LWARLPEKH-------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 316 ~~~~~~-~~~~~~~~~-------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
..+.++ +++..+... .+ ...++..++ ++||.+.++. .+.+|+++. .+++++++++++|.+++.
T Consensus 348 ~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~l~~~-~t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 348 RVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPSQ----FEACFLSAA-HTEEDIENTIEAAEEVFA 421 (423)
T ss_pred eeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecCC----ccceeeECC-CCHHHHHHHHHHHHHHHh
Confidence 333333 223322110 01 225666776 6899987542 246899987 499999999999999987
Q ss_pred H
Q 015768 385 E 385 (400)
Q Consensus 385 ~ 385 (400)
+
T Consensus 422 ~ 422 (423)
T TIGR00713 422 E 422 (423)
T ss_pred h
Confidence 5
No 195
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.95 E-value=1e-25 Score=210.71 Aligned_cols=281 Identities=22% Similarity=0.212 Sum_probs=203.2
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (400)
+....+++.++++. |. ++.++++++++|+..++.++.++||+|+++.++|.+.... ++..|+++..+ +.
T Consensus 40 p~~~~le~~la~l~----g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~ 112 (369)
T cd00614 40 PTVDALEKKLAALE----GG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV-DP 112 (369)
T ss_pred hhHHHHHHHHHHHH----CC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe-CC
Confidence 34455555555554 53 5678888899999999999999999999999999887654 34678888887 54
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
+ +++.+++.+++++ ++|++++|+||+|.+.| +++|.++|+++|+++|+|++|+..... .....+.
T Consensus 113 ~------d~~~l~~~i~~~~--~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~~~g~ 177 (369)
T cd00614 113 D------DPEALEAAIKPET--KLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPLELGA 177 (369)
T ss_pred C------CHHHHHHhcCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----ChhhhCC
Confidence 3 5888999887655 99999999999999999 889999999999999999999865431 1223456
Q ss_pred EEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
++++.|++|.+|.+| .+.|++++++ +++++++..........++++..+++...++. +..+++++.+++..+.
T Consensus 178 Divv~S~tK~l~g~~~~~gG~v~~~~--~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t----l~~r~~~~~~na~~la 251 (369)
T cd00614 178 DIVVHSATKYIGGHSDVIAGVVVGSG--EALIQRLRFLRLALGTILSPFDAWLLLRGLKT----LPLRMERHSENALKVA 251 (369)
T ss_pred cEEEeccceeccCCCCceEEEEEeCc--HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC----HHHHHHHHHHHHHHHH
Confidence 799999999997554 7899999874 47888888766655666777777776666654 5667888899999999
Q ss_pred HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc--------
Q 015768 303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC-------- 354 (400)
Q Consensus 303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~-------- 354 (400)
+.|++++.+. +..| ..+.++.+.+.. +.++.. .+++.-.+. +.-|...
T Consensus 252 ~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~---~~~~~~-~f~~~l~~~~~~~s~G~~~sl~~~~~~ 327 (369)
T cd00614 252 EFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG---GLEAAK-KFLNALKLFSLAVSLGGVESLVEHPAS 327 (369)
T ss_pred HHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC---CHHHHH-HHHHcCCcceEcccCCCCceeeeCCcc
Confidence 9999887532 2222 135666667752 222222 233333333 1112111
Q ss_pred --------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 355 --------------G-CRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 355 --------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
+ .++.+|+|++. |+.+++++.|.+++
T Consensus 328 ~~~~~~~~~~~~~~g~~~~liR~svGl---E~~~dl~~dl~~al 368 (369)
T cd00614 328 MTHSQLPPEERAAAGITPGLVRLSVGI---EDVEDLIADLEQAL 368 (369)
T ss_pred cccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 0 14589999997 66777888888776
No 196
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.95 E-value=2.8e-25 Score=210.64 Aligned_cols=344 Identities=13% Similarity=0.122 Sum_probs=230.7
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.....+. ....+...++++.+.+.... ..+.++|++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~ 114 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQ--IVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAV 114 (421)
T ss_pred CCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccC--ccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHH
Confidence 5678899998775 3343 7899999999998864322221 11234445666666655432 236899999999999
Q ss_pred HHHHHHhcC--CCCEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCC--CCCCC--CCHHHHHHhhcc-
Q 015768 103 VNIVLTLCD--AGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCS--SKTLH--PDADWLEKTLET- 161 (400)
Q Consensus 103 ~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~--~~~~~--~~~e~l~~~l~~- 161 (400)
+.+++.... ...+|+....+|++....... .|. .++.+ |.. ..+.. -+++.+++.+..
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v-~~p~~~~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK09792 115 ENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHV-PYPSDLHGISTQDSLDAIERLFKSD 193 (421)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEc-CCCcccccccHHHHHHHHHHHHHhc
Confidence 999998752 236899999999887633322 121 11222 221 11110 134778877762
Q ss_pred --CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768 162 --KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 162 --~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 238 (400)
...+++|+++..++++|... |.+++++|.++|++||+++|+||++.++...+........+...-+.+++|.++ +|
T Consensus 194 ~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~-~G 272 (421)
T PRK09792 194 IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLA-GG 272 (421)
T ss_pred cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhc-CC
Confidence 23468888887789999865 899999999999999999999999998876554322111111122568899998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCccc
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVK 314 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 314 (400)
+++||++.+ +++.+.+.......+++.+++.+.++.+.++..++ .+..++.++..+++.+.|+. ++. +.
T Consensus 273 ~pigav~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~~l~~~~p~--v~ 345 (421)
T PRK09792 273 MPLSGVVGN---ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK--ESLCERANQLGQRLKNTLIDAKESVPA--IA 345 (421)
T ss_pred CceEEEEEc---HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHHHhCCC--cc
Confidence 999999998 78877776555567888999999977777664211 12333344444444444433 443 33
Q ss_pred CCCC-ceEEEeeCCCCC------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 315 GGEG-AIYLWARLPEKH------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 315 ~~~~-~~~~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
.+.+ |.++|+.+++.. .....+...++ ++||.+.+... .++.+||.++. ++++++++++++|.+++.
T Consensus 346 ~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~-~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 346 AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL-AQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred eecccceEEEEEecCCccCCcchHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 4444 899999986431 12355666665 79999964221 25899999888 899999999999999885
No 197
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.95 E-value=2.4e-25 Score=213.07 Aligned_cols=351 Identities=12% Similarity=0.117 Sum_probs=225.5
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|.+.+++.+.+.+...... .....+...++++.|.+..... .+.++++++|++|+
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~ 128 (451)
T PRK06918 51 VDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGF--NVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAV 128 (451)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccc--cccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHH
Confidence 4578899998875 3343 789999999999886422111 1112345567777776654322 26899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-Cc-------------EEEEeccCC-----CCCCCC------CHHHH
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCS-----SKTLHP------DADWL 155 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~-----~~~~~~------~~e~l 155 (400)
+.+++... ....+|+....+|++........ +. .+..+ |.. +.+... .++.+
T Consensus 129 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (451)
T PRK06918 129 ENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKA-PFPYEYRRPEGLTEEQYDDFMIEEF 207 (451)
T ss_pred HHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEc-CCCccccccccCchHHHHHHHHHHH
Confidence 99999764 23367999999999877544322 11 11222 211 011000 02234
Q ss_pred HHhhc---cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768 156 EKTLE---TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS 231 (400)
Q Consensus 156 ~~~l~---~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s 231 (400)
++.+. ....+.+|+++..+...|. ..+.+++++|.++|++||+++|+||+|.++...+........+....+.++|
T Consensus 208 ~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~s 287 (451)
T PRK06918 208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVS 287 (451)
T ss_pred HHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeee
Confidence 44332 1223577777655555676 4566779999999999999999999999887655322111122112255899
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc----c
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----P 307 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~----~ 307 (400)
|.++ +|+|+||++.+ +++.+.+.......+++.+++.+.++.+.|+...+ ....++.++..+++.+.|+ +
T Consensus 288 K~l~-~G~pig~v~~~---~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~l~~l~~~ 361 (451)
T PRK06918 288 KSLG-AGVPISGVIGR---KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEK--ENLNDRAIELGKVVMNRFEEMKNK 361 (451)
T ss_pred hhhc-CCCccEEEEEc---HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998 89999999998 78888776555667888999999997777763211 1222233333344444443 3
Q ss_pred CCCCcccCCCCceEEEeeCCCC--CC----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768 308 LGEGAVKGGEGAIYLWARLPEK--HL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR 380 (400)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~ 380 (400)
++.+..+.+.++++.|....+. .. ....+...+ .++||.+.|+..| .+++|++++. .+++++++++++|.
T Consensus 362 ~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~--~~~lrl~p~l~~t~~~id~~l~~l~ 438 (451)
T PRK06918 362 YNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTY--GNVIRVLMPLVITDEQLEEGLTIIE 438 (451)
T ss_pred CCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCC--CCEEEEECCCccCHHHHHHHHHHHH
Confidence 3433334456566666543110 00 133455544 4899999997654 3789999986 79999999999999
Q ss_pred HHHHHHhcc
Q 015768 381 RGLEELVKD 389 (400)
Q Consensus 381 ~~l~~~~~~ 389 (400)
++++++.++
T Consensus 439 ~~l~~~~~~ 447 (451)
T PRK06918 439 ESLQACYEK 447 (451)
T ss_pred HHHHHHHHh
Confidence 999988654
No 198
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.95 E-value=1.9e-26 Score=215.27 Aligned_cols=310 Identities=17% Similarity=0.155 Sum_probs=215.7
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCC--CCCC--cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc----CCC-
Q 015768 43 QPPKMAMEKVKELVWDPSISKYG--ADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAG- 113 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~--~~~g--~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~----~~g- 113 (400)
++|+.+++++.+.+......... ...+ ...+.+.+.+.+++.+|+++++|++++|+|++++.++.++. ++|
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~ 88 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGK 88 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCC
Confidence 56799999998887532111110 0001 11334555566666668888999999999999999998885 356
Q ss_pred CEEEEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 114 DSVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 114 d~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
+.|++....|+++... ++..|++++.+ +.+++ +.+|++++++.+++++ ++|++++++||||.+.| +++|.
T Consensus 89 ~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v-~~~~~-~~~d~~~l~~~l~~~~--~lv~~~~~~n~tG~~~~---~~~I~ 161 (353)
T TIGR03235 89 KHIITSAIEHPAVLEPIRALERNGFTVTYL-PVDES-GRIDVDELADAIRPDT--LLVSIMHVNNETGSIQP---IREIA 161 (353)
T ss_pred CeeeEcccccHHHHHHHHHHHhcCCEEEEE-ccCCC-CcCCHHHHHHhCCCCC--EEEEEEcccCCceeccC---HHHHH
Confidence 7898888888776544 45579999999 87754 4689999999997655 99999999999999999 89999
Q ss_pred HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH--HHHh-------h
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ--LLKV-------Q 261 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~--l~~~-------~ 261 (400)
++|+++|+++++|++++.... +......+.++++.|++|++|.+| +|+++.++ +.... +... .
T Consensus 162 ~l~~~~~~~~ivD~a~~~g~~---~~~~~~~~~D~~~~s~~K~~gp~g--~g~l~~~~---~~~~~~~~~~~~~~~~~~~ 233 (353)
T TIGR03235 162 EVLEAHEAFFHVDAAQVVGKI---TVDLSADRIDLISCSGHKIYGPKG--IGALVIRK---RGKPKAPLKPIMFGGGQER 233 (353)
T ss_pred HHHHHcCCEEEEEchhhcCCc---cccccccCCCEEEeehhhcCCCCc--eEEEEEcc---CcccccccCceeeCCCCcC
Confidence 999999999999999884332 233334567899999999876444 78888774 22111 1110 0
Q ss_pred ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEEeeCCCCCCCHHHHHH
Q 015768 262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVR 338 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 338 (400)
.....+++.....++..+++...+..++..++++++.+.+++.|++.+. ++..+.. ..++.+.++. .+.+++..
T Consensus 234 ~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~~~~~--~~~~~v~~ 310 (353)
T TIGR03235 234 GLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLGV-KLNGDPAETIPHILNFSIDG--VNSEALIV 310 (353)
T ss_pred ccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCe-EEeCCcccccCCEEEEEeCC--cCHHHHHH
Confidence 1123456667777777777643344577788899999999999988543 5443221 2234445543 35777877
Q ss_pred HHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHH
Q 015768 339 WLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCK 373 (400)
Q Consensus 339 ~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~ 373 (400)
.| ++ +|.+.+|..|.. +.++|.+++. +++.+.
T Consensus 311 ~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~-~~~~~~ 346 (353)
T TIGR03235 311 NL-RA-DAAVSTGSACSSSKYEPSHVLQAMGL-DTDRAR 346 (353)
T ss_pred HH-hC-CeEEEchhhcCCCCCCCCHHHHHcCC-CHHHhC
Confidence 77 34 899999998853 3378888886 555443
No 199
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=1.3e-25 Score=210.77 Aligned_cols=287 Identities=17% Similarity=0.139 Sum_probs=202.2
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~ 143 (400)
+....+++.++++. |. ++.++++++++|+..++.++.++||+|+++.|+|.+... .++..|+++..+ +.
T Consensus 64 p~~~~le~~lA~l~----g~--~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v-d~ 136 (398)
T PRK08249 64 PTVQAFEEKVRILE----GA--EAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC-ET 136 (398)
T ss_pred hHHHHHHHHHHHHh----CC--CeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc-CC
Confidence 34455666666655 53 456777888899999999999999999999999987654 345678888777 42
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
.|++.+++.+++++ ++|++++|+||+|.+.| +.+|.++|+++|+++|+|++|..+.... ....+.
T Consensus 137 ------~d~e~l~~~i~~~t--klV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----~l~~~~ 201 (398)
T PRK08249 137 ------GDHEQIEAEIAKGC--DLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN----PLALGA 201 (398)
T ss_pred ------CCHHHHHHhcCCCC--eEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC----chhhCC
Confidence 37899999998766 99999999999999999 8889999999999999999998654322 122345
Q ss_pred EEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
++++.|+||++|.+|.++ |+++.+ +++++++...+.......++..++.+...++. +..++++..+++..+.
T Consensus 202 Divv~S~sK~l~g~~~~~gG~vv~~---~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t----L~~R~~~~~~na~~la 274 (398)
T PRK08249 202 DLVIHSATKFLSGHADALGGVVCGS---KELMEQVYHYREINGATMDPMSAYLILRGMKT----LKLRVRQQQESAMALA 274 (398)
T ss_pred CEEeccCceecCCCCCceEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch----HHHHHHHHHHHHHHHH
Confidence 688999999997556554 777766 78888888777655666777777776666654 5677788889999999
Q ss_pred HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----------
Q 015768 303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----------- 354 (400)
Q Consensus 303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----------- 354 (400)
+.|++++.+. +..| ..|-.+.+.+........+++..| +=..+.+.-|...
T Consensus 275 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l-~l~~~~~s~G~~~sl~~~~~~~~~ 353 (398)
T PRK08249 275 KYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKL-RYAHRAANLGAVETIYGPARTTSH 353 (398)
T ss_pred HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhC-CcceEccCCCCCCceeeCCccccc
Confidence 9999877532 2211 123445556643211122333322 1111222222211
Q ss_pred -----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 355 -----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 355 -----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+ .++.+|||++. |+.+++++.|.+++....
T Consensus 354 ~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 354 VENTLEERAALGIPEGLVRISVGI---EDTEDLIADLEQAFAHLE 395 (398)
T ss_pred ccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHhh
Confidence 0 13579999997 677788888888888644
No 200
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.95 E-value=1.3e-25 Score=210.82 Aligned_cols=279 Identities=19% Similarity=0.214 Sum_probs=194.1
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSS 145 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~ 145 (400)
...+++.++++ +|. +++++++|+++|+..++.++.++||+|+++.+.|.+... .++..|++++++ +.+
T Consensus 63 ~~~le~~la~l----~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~~- 134 (390)
T PRK08133 63 VTMFQERLAAL----EGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFV-DLT- 134 (390)
T ss_pred HHHHHHHHHHH----hCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEE-CCC-
Confidence 44455555554 464 568899999999999999999999999999999977654 456789999888 653
Q ss_pred CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
+.+.+++.+++++ |+|++++|+||+|.+.+ +++|.++|+++|+++|+|+++....... ....+.++
T Consensus 135 -----d~~~l~~~i~~~t--klV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~~----pl~~g~Di 200 (390)
T PRK08133 135 -----DLDAWRAAVRPNT--KLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQQ----PLKLGADV 200 (390)
T ss_pred -----CHHHHHHhcCcCC--eEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccCC----chhhCCcE
Confidence 6888999998766 99999999999999999 8999999999999999999987544322 12334578
Q ss_pred EEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768 226 NLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (400)
++.|+||+++.+|.++ |+++.+ ++.++++..........+++..++.+...+ +.+..+.+++.+++..+.+.
T Consensus 201 vv~S~sK~~~g~g~~~GG~vv~~---~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl----~tl~~R~~~~~~~a~~la~~ 273 (390)
T PRK08133 201 VIHSATKYLDGQGRVLGGAVVGS---KELMEEVFGFLRTAGPTLSPFNAWVFLKGL----ETLSLRMEAHSANALALAEW 273 (390)
T ss_pred EEeecceeecCCcceEeEEEEcC---HHHHHHHHHHHHHhCCCCCHHHHHHHHccc----chHHHHHHHHHHHHHHHHHH
Confidence 8999999998778776 566666 566666655444444455555555444333 34677788888899999999
Q ss_pred hccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc----------
Q 015768 305 LSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC---------- 354 (400)
Q Consensus 305 L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~---------- 354 (400)
|++++.+. +..| ..+-.+.+.+.. +.++ +..+++.-.++ +.-|..-
T Consensus 274 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~---~~~~-~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~ 349 (390)
T PRK08133 274 LEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG---GREA-AWRVIDATRLISITANLGDTKTTITHPATTT 349 (390)
T ss_pred HHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC---CHHH-HHHHHHhCCcceEeccCCCcceeeecCCCCC
Confidence 99876532 1111 123455566642 1222 22233333332 2211000
Q ss_pred ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+ .++.+|+|++. |+.+++++.|.++|.
T Consensus 350 ~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 389 (390)
T PRK08133 350 HGRLSPEARAAAGITEGLIRVAVGL---EDVADIKADLARGLA 389 (390)
T ss_pred cccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHhh
Confidence 0 14689999997 667788888888875
No 201
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=3.1e-25 Score=206.31 Aligned_cols=293 Identities=16% Similarity=0.131 Sum_probs=208.2
Q ss_pred CCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcE
Q 015768 63 KYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVT 136 (400)
Q Consensus 63 ~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~ 136 (400)
.|+. .+....++++++++. + .+++++++|+++|+..++.+++++||+|++++|.|.++... ++..|++
T Consensus 54 ~Y~r~~npt~~~Le~~iA~le----~--~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~ 127 (394)
T PRK09028 54 FYGRRGTPTHFAFQAAIVELE----G--GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIE 127 (394)
T ss_pred eecCCCCchHHHHHHHHHHHh----C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceE
Confidence 3543 344567888888764 3 35789999999999999999999999999999999887753 3567888
Q ss_pred EEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc
Q 015768 137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH 216 (400)
Q Consensus 137 ~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~ 216 (400)
+..+ +.+ +.+.+++.+.+++ |+|++++|+||+|.+.+ +++|+++|+++|+++++|++|+... ..
T Consensus 128 v~~v-~~~------~~e~l~~~l~~~T--klV~lespsNPtg~v~d---l~~I~~la~~~g~~lvvD~t~a~p~----~~ 191 (394)
T PRK09028 128 TTYY-DPM------IGEGIRELIRPNT--KVLFLESPGSITMEVQD---VPTLSRIAHEHDIVVMLDNTWASPI----NS 191 (394)
T ss_pred EEEE-CCC------CHHHHHHhcCcCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCccccc----cC
Confidence 8777 322 4577888887766 99999999999999887 9999999999999999999998532 12
Q ss_pred cccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 015768 217 CCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 295 (400)
Q Consensus 217 ~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 295 (400)
.+...+.++++.|.+|+++ .++.-.|+++.+ +++.+++..........+++...+.+...|+. +.-+++++.
T Consensus 192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~---~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~ 264 (394)
T PRK09028 192 RPFEMGVDISIQAATKYIVGHSDVMLGTATAN---EKHWDQLREHSYLMGQCTSPDDVYLAMRGLRT----LGVRLAQHE 264 (394)
T ss_pred CccccCceEEEEeCCeEecCCCCEEEEEEECC---HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHH
Confidence 3345678899999999994 345777877765 66767676555545566788887777777765 678889999
Q ss_pred HHHHHHHHHhccCCCC-cccCC----------------CCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccC--
Q 015768 296 RNREIIREALSPLGEG-AVKGG----------------EGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACG-- 355 (400)
Q Consensus 296 ~~~~~l~~~L~~~~~~-~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~-- 355 (400)
+++..+.+.|++++.+ ++..| ..+-.+.+.+.... ....++++.| +=..+.+.-|....
T Consensus 265 ~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l-~l~~~~~slG~~~sLv 343 (394)
T PRK09028 265 KNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGM-QHFKMGFSWGGFESLI 343 (394)
T ss_pred HHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhC-CcceEecccCCCccee
Confidence 9999999999998763 23222 12345556665211 1122333332 11122222221110
Q ss_pred -----------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 356 -----------------CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 356 -----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.++.+|||++. |+.+++++.|.+++..+..
T Consensus 344 ~~p~~~~~~~~~~~~~~~~~liR~svGl---Ed~~dLi~Dl~~Al~~~~~ 390 (394)
T PRK09028 344 LGVFGINKLRTATNWDFSKPLIRLHIGL---EDVDDLIADLEAGFERYNA 390 (394)
T ss_pred ECCCCcCccCchhhhcCCCCeEEEEeCc---CCHHHHHHHHHHHHHHHHH
Confidence 12579999997 5677788888888876643
No 202
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.95 E-value=2e-25 Score=209.92 Aligned_cols=287 Identities=21% Similarity=0.220 Sum_probs=199.5
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP 142 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~ 142 (400)
.+....+++.++++. |.+. .+++++++.++..++.++.++||+|+++.+.|.++...+ +..|++++.+ +
T Consensus 64 ~p~~~~Le~~lA~l~----G~~~--~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-d 136 (398)
T PRK07504 64 NPTVDMFEKRMCALE----GAED--ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLV-D 136 (398)
T ss_pred CchHHHHHHHHHHHh----CCCe--eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEE-C
Confidence 344566777777665 6543 345778889999888888999999999999998765443 4578888887 4
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 222 (400)
..|++.+++.+++++ |+|++++|+||+|.+.| +++|.++|+++|+++|+|++|..+.+.. ....+
T Consensus 137 ------~~d~e~l~~ai~~~t--klV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~----~~~~g 201 (398)
T PRK07504 137 ------GLDLDNWEKAVRPNT--KVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK----PLELG 201 (398)
T ss_pred ------CCCHHHHHHhcCcCc--eEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC----chhhC
Confidence 258999999998766 99999999999999999 8899999999999999999998654421 22335
Q ss_pred cEEEEeccccccCCCcceeE-EEEccCCcHHHH-HHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 223 HVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFA-TQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 223 ~~i~~~s~sK~~g~~g~~~G-~i~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
.++++.|++|+++.+|.++| +++++ ++.+ +.+..........++++..+.+...|+. +..+.++..+++..
T Consensus 202 aDivv~S~sK~l~g~g~~~GG~vv~~---~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t----l~~R~~~~~~na~~ 274 (398)
T PRK07504 202 AHIVVYSATKHIDGQGRCLGGVVLSD---KAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET----LPVRVRQQTESAAA 274 (398)
T ss_pred CCEEEeeccccccCCccceEEEEEeC---cHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHH
Confidence 67899999999987888875 56666 3443 3454433334455677766666666654 67778888899999
Q ss_pred HHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc---------
Q 015768 301 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------- 354 (400)
Q Consensus 301 l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------- 354 (400)
+.+.|++++.+. +..| ..+..+.+.+........++++.| +=..+.+.-|...
T Consensus 275 la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l-~~~~~~~slG~~~sl~~~p~~~ 353 (398)
T PRK07504 275 IADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNAL-KIVRISNNLGDAKSLITHPATT 353 (398)
T ss_pred HHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhC-CcceecccCCCCCeeeeCCCCC
Confidence 999999877532 2211 124566667753211222333333 1122222222211
Q ss_pred -------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 355 -------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 355 -------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+ .++.+|||++. |+.+++++.|+++|...
T Consensus 354 ~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 354 THKNLSPEARAELGISEGFLRLSAGL---EDTDDLIEDLAAALKKV 396 (398)
T ss_pred CcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 0 13679999997 66778888888888764
No 203
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.95 E-value=1.2e-25 Score=209.99 Aligned_cols=287 Identities=22% Similarity=0.197 Sum_probs=203.2
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEecc
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGP 142 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~ 142 (400)
.+....+++.++++. | .+++++++|+++|+..++.++.++||+|+++.|+|.+....+. ..|+++..+ +
T Consensus 50 ~p~~~~le~~lA~l~----g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~-d 122 (382)
T TIGR02080 50 NPTRDLLQQALAELE----G--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFV-D 122 (382)
T ss_pred CchHHHHHHHHHHHh----C--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEE-C
Confidence 344566666666655 4 4689999999999999999999999999999999987665442 234565555 3
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 222 (400)
. .|++.+++.+++++ |+|++++|+||||.+++ +++|.++|+++|+++++|++|..+.... + ...+
T Consensus 123 ~------~d~~~l~~ai~~~t--klV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~-p---l~~g 187 (382)
T TIGR02080 123 Q------GDEQALRAALAQKP--KLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN-P---LALG 187 (382)
T ss_pred C------CCHHHHHHhcCcCc--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC-c---hhhC
Confidence 1 27889999998765 99999999999999999 8888999999999999999998654322 1 1224
Q ss_pred cEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 223 HVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 223 ~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
.+++++|+||+++ .++++.|+++.++ +++.+++...+......++++..+.+...++. +..+++++.+++..+
T Consensus 188 aDivv~S~sK~l~G~~~~~~G~i~~~~--~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~t----l~~R~~~~~~na~~~ 261 (382)
T TIGR02080 188 ADLVLHSCTKYLNGHSDVIAGAVIAKD--PQVAEELAWWANNLGVTGGAFDSYLTLRGLRT----LVARMRLQQRNAQAI 261 (382)
T ss_pred CCEEEeecceeccCCCCceeEEEEeCC--HHHHHHHHHHHHccCCCCCHHHHHHHHcccch----HHHHHHHHHHHHHHH
Confidence 5689999999995 4678899988765 78888888777666777788877766555543 667788888999999
Q ss_pred HHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc----------
Q 015768 302 REALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC---------- 354 (400)
Q Consensus 302 ~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~---------- 354 (400)
.+.|++++.+. +..| ..+-.+.+.+........++...| +=..+.+.-|...
T Consensus 262 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~p~~~~ 340 (382)
T TIGR02080 262 VEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGL-SLFTLAESLGGVESLIAHPATMT 340 (382)
T ss_pred HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcC-CcceEeccCCCCcceeECCCccC
Confidence 99999877632 2221 123456667753111122333332 1122233333211
Q ss_pred ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+ .++.+|||++. |+.+++++.|.+++..
T Consensus 341 ~~~~~~~~~~~~gi~~~liRlsvGl---E~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 341 HAAMGPEARAEAGISDTLLRLSVGL---EDADDLIADLEQGLRA 381 (382)
T ss_pred cccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 0 13589999997 6677788888888763
No 204
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.95 E-value=8.4e-25 Score=210.50 Aligned_cols=340 Identities=16% Similarity=0.094 Sum_probs=234.2
Q ss_pred cCCCCCCCCCcHHHHHHHHHhhcCCCCCCC---CCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH--HH-H
Q 015768 35 LAQGVVYWQPPKMAMEKVKELVWDPSISKY---GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI--VL-T 108 (400)
Q Consensus 35 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y---~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~--~~-~ 108 (400)
++.|++++..+|.+.+++.+...-.....| ...+|..+++.++.+++++.+|++...+..++|+++.+..+ ++ .
T Consensus 73 ~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~ 152 (481)
T PRK04366 73 YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAY 152 (481)
T ss_pred ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHH
Confidence 566777777889999988876322246678 34678889999999999999998743444344444444322 22 3
Q ss_pred hcCCCC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 109 LCDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 109 l~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
+.++|| +|+++.++|+.+...++..|++++.+ |.+.+ +.+|++++++.+++++ ++|++++|+ ++|.+ ..
T Consensus 153 ~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v-~~~~~-~~~D~e~L~~~i~~~t--~~V~v~~Pn-~tG~~--~~ 225 (481)
T PRK04366 153 HEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEI-PSNED-GLVDLEALKAAVGEDT--AALMLTNPN-TLGLF--ER 225 (481)
T ss_pred hhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEe-ecCCC-CCcCHHHHHhhcccCC--eEEEEeCCC-Ccccc--ch
Confidence 356666 99999999999999999999999999 88644 5789999999998766 899999988 99965 23
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCC----cceeEEEEccCCcHHHHHHHHHh
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM----GWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~----g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
++++|+++|+++|+++++|+++.....+. ......+.+++++|.+|+++.| |..+|++.++ +++.+.+...
T Consensus 226 dl~eI~~~a~~~gal~iVD~a~~~~~~g~--~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~---~~~~~~lp~~ 300 (481)
T PRK04366 226 NILEIAEIVHEAGGLLYYDGANLNAILGK--ARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVK---EELAPFLPVP 300 (481)
T ss_pred HHHHHHHHHHHcCCEEEEEecChhhhccc--CCccccCCCEEEEechhhcCCCCCCCCCCeeeeeeh---hhhHhhCCCC
Confidence 49999999999999999999986332221 1223456789999999998643 4557888877 4454444210
Q ss_pred -------------------hccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768 261 -------------------QDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 320 (400)
Q Consensus 261 -------------------~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 320 (400)
+....++.+.....++..++.. +.+.+++..++...+++++++.|+++..+.+ ......
T Consensus 301 ~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~-~~~~~~ 379 (481)
T PRK04366 301 VVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLPY-DRPCMH 379 (481)
T ss_pred eeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcccC-CCCeeE
Confidence 0111122333444455555443 4455667778888889999999988622222 111112
Q ss_pred EEEeeCC---CCCCCHHHHHHHHHHhcCeEEeCCCccC-CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 321 YLWARLP---EKHLDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 321 ~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
-+.++++ ....+..++.++|. ++||.+....... ..+.+|++++. +|.+|++.+++.|+++.++..+
T Consensus 380 ~~~~~~~~~~~~g~~~~~v~~~L~-~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 380 EFVLSGKKLKETGVRTLDIAKRLL-DYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred EEEEECccccccCCCHHHHHHHHH-HCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2333432 11235778888886 7899875222212 36789999987 8999999999999999887764
No 205
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.95 E-value=1.4e-24 Score=204.39 Aligned_cols=343 Identities=16% Similarity=0.179 Sum_probs=233.1
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.. .++.. -..+...++++.|.+.... .+.+++++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e 112 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANE 112 (408)
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHH
Confidence 5678999998875 4454 78999999999887632 11111 1234455667777655321 378999999999999
Q ss_pred HHHHHhcC--------CC-CEEEEeCCCccchhHHHHh-cCcEEE--EeccCCCC----CCCCCHHHHHHhhccCCCCeE
Q 015768 104 NIVLTLCD--------AG-DSVVMFAPYYFNSYMSFQM-TGVTHI--LVGPCSSK----TLHPDADWLEKTLETKPTPKL 167 (400)
Q Consensus 104 ~~~~~l~~--------~g-d~vlv~~p~~~~~~~~~~~-~g~~~~--~~~~~~~~----~~~~~~e~l~~~l~~~~~~~~ 167 (400)
.+++.... ++ .+|+....+|++....... .|.... .+.|..+. .+ .|++.+++.+..++ +.+
T Consensus 113 ~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~-~aa 190 (408)
T PRK04612 113 AAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGD-VAA 190 (408)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCC-EEE
Confidence 99987642 12 4699999999887644332 221110 01011111 11 27888988886433 444
Q ss_pred EEEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768 168 VSVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245 (400)
Q Consensus 168 v~l~~p~nptG~~~--~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~ 245 (400)
+ +..|.+++|-+. +.+++++|.++|++||+++|+||+|.++...+........+..+.+.+++|.+| +|+++|+++
T Consensus 191 v-i~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~-~G~piga~~ 268 (408)
T PRK04612 191 V-MLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALG-GGFPIGAML 268 (408)
T ss_pred E-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhc-CCCceEEEE
Confidence 4 455666666443 467999999999999999999999998766553222222345566789999998 899999999
Q ss_pred ccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCceE
Q 015768 246 YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAIY 321 (400)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~ 321 (400)
.+ +++.+.+.......+++.+++.+.++.+.|+..++ ++..++.+++.+++.+.|+++ +.+..+... |.+
T Consensus 269 ~~---~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~-Gl~ 342 (408)
T PRK04612 269 AG---PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS--PQIAANVARQSAALRAGLEALNAEFGVFAQVRGR-GLM 342 (408)
T ss_pred EC---HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecc-ceE
Confidence 88 67777776555567788899999999999875222 345566666667776666653 333334455 566
Q ss_pred EEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 322 LWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 322 ~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+-+.+... ......+...+. ++||.+.+. +++.+|+.++. .+++++++++++|.+++.++..
T Consensus 343 ~~i~~~~~~~~~a~~i~~~l~-~~Gvlv~~~----g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 343 LGAVLAPAHAGQAGAILDLAA-EHGLLLLQA----GPDVLRFVPALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred EEEEecCchhhHHHHHHHHHH-HCCeEEeeC----CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 65665321 112455666664 899999763 35889999887 8999999999999999988754
No 206
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=1e-24 Score=207.39 Aligned_cols=352 Identities=14% Similarity=0.133 Sum_probs=232.8
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+... +.......+.+.++++.|.+.....-+.++|+++|++|++
T Consensus 38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve 115 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDAND 115 (443)
T ss_pred CCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHH
Confidence 5678899998874 4554 789999999999886422 1111122345566777776654433368999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHH-HHhcCc------------EEEEeccCCCC-C--CC--------CCHHHHHH
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMS-FQMTGV------------THILVGPCSSK-T--LH--------PDADWLEK 157 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~-~~~~g~------------~~~~~~~~~~~-~--~~--------~~~e~l~~ 157 (400)
.+++... .....|+....+|++.... +...|. .+..+ |..+. . +. .+++.+++
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (443)
T PRK08360 116 GAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYI-PYPDCYRCPFGKEPGSCKMECVEYIKE 194 (443)
T ss_pred HHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEE-eCCccccccccCchhhhHHHHHHHHHH
Confidence 9999764 2336788888888886532 222221 11222 21110 0 00 12445666
Q ss_pred hhcc---CCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccc
Q 015768 158 TLET---KPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFS 231 (400)
Q Consensus 158 ~l~~---~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~s 231 (400)
.+.. ...+++|+++..+||+|.+++ .+++++|.++|++||+++|+||+|.++...+..... .....+++ ++|
T Consensus 195 ~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii--tls 272 (443)
T PRK08360 195 KFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII--TLG 272 (443)
T ss_pred HHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE--Eec
Confidence 6642 234688888866899998776 668999999999999999999999987655532111 11122333 679
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP---- 307 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 307 (400)
|.+| +|+|+|+++.+ +++++.+.......+++.+++.+.++.++|+.-.+ .+..++.+++.+++++.|++
T Consensus 273 K~l~-~G~pigav~~~---~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~ 346 (443)
T PRK08360 273 KPLG-GGLPISATIGR---AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE--KNLLKRAEKLGNYTKKRLEEMKKK 346 (443)
T ss_pred cccc-CCceeEEEEEc---HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9998 89999999998 78888887655566788899999998888875221 23445555666666665554
Q ss_pred CCCCcccCCCCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 308 LGEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
.+.+..+.+. |.++-+.+.... .....+...++ ++||.+.+. ..+.+|++++. ++++++++++++|
T Consensus 347 ~~~v~~vrg~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lr~~P~l~~t~~~id~~~~~l 420 (443)
T PRK08360 347 HELIGDVRGI-GLMIGVDLVKDRETKERAYEEAAKVVWRAW-ELGLIVTFF----SGNVLRIQPPLTIEKEVLDEGLDIL 420 (443)
T ss_pred CCCeeeeecc-ceEEEEEEecCCcccCccHHHHHHHHHHHH-HCCeEEeec----CCCEEEEeCCCCCCHHHHHHHHHHH
Confidence 3333333344 555555553210 01235666665 899998653 25789998877 8999999999999
Q ss_pred HHHHHHHhccCcccccc
Q 015768 380 RRGLEELVKDGMVQEHV 396 (400)
Q Consensus 380 ~~~l~~~~~~~~~~~~~ 396 (400)
.+++..+ +++++-+++
T Consensus 421 ~~~l~~~-~~~~~~~~~ 436 (443)
T PRK08360 421 EEAIEDV-EEGKVPDEV 436 (443)
T ss_pred HHHHHHH-HhccCCHHH
Confidence 9999986 445554443
No 207
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.95 E-value=5.7e-25 Score=207.16 Aligned_cols=286 Identities=21% Similarity=0.206 Sum_probs=198.8
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~ 143 (400)
+....+++.++++. |.+ ..+++++++.|+..++.++.++||+|+++.|.|.+.. ..++..|++++.+ +.
T Consensus 65 p~~~~le~~lA~l~----g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~v-d~ 137 (403)
T PRK07503 65 PTLALLEQRMASLE----GGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHV-DL 137 (403)
T ss_pred chHHHHHHHHHHHh----CCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEe-CC
Confidence 44566666666655 543 4577778889999999999999999999999996644 3456789998888 54
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
+ +++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|...... .+ ...+.
T Consensus 138 ~------d~~~l~~~i~~~t--klV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~-~~---l~~g~ 202 (403)
T PRK07503 138 T------DPAALKAAISDKT--RMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ-RP---LELGA 202 (403)
T ss_pred C------CHHHHHHhcCccC--cEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-Cc---hhhCC
Confidence 3 6889999987765 99999999999999999 889999999999999999999855332 11 12355
Q ss_pred EEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+++++|++|++|.+| .++|+++.+ +++.++++.. .......++++..+.+...|+. +..+.++..+++..
T Consensus 203 Di~v~S~tK~l~g~gd~~gG~v~~~---~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t----l~~r~~~~~~na~~ 275 (403)
T PRK07503 203 DLVVHSATKYLGGHGDITAGLVVGG---KALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT----LALRMDRHCASAQA 275 (403)
T ss_pred CEEEccccccccCCCceeEEEEEcC---HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHHH
Confidence 699999999998654 778999866 7788877633 3334556677777666555543 56777777888999
Q ss_pred HHHHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc------
Q 015768 301 IREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC------ 354 (400)
Q Consensus 301 l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~------ 354 (400)
+.+.|++++.+. +..|. .+-++.+.+... ...... +.+.-.++ +.-|...
T Consensus 276 ~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~---~~~~~~-~~~~l~l~~~~~slG~~~sl~~~~ 351 (403)
T PRK07503 276 VAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGG---IAAGRR-FMNALQLFARAVSLGDAESLAQHP 351 (403)
T ss_pred HHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCC---HHHHHH-HHHhCCcceeecccCCCCccCcCC
Confidence 999998877532 11111 123444455432 222222 22323332 1111111
Q ss_pred ----------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 355 ----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 355 ----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+ .++.+|||++. |+.+++++.|.+++......
T Consensus 352 ~~~~h~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~Al~~~~~~ 400 (403)
T PRK07503 352 ASMTHSTYTPEERAEHGISEGLVRLSVGL---EDVADILADLAQALDACAVA 400 (403)
T ss_pred CCCccccCCHHHHHhcCCCCCeEEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 0 13579999997 67778888899998876543
No 208
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.95 E-value=4e-25 Score=207.82 Aligned_cols=216 Identities=20% Similarity=0.182 Sum_probs=167.8
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccch----hHHHHhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~ 143 (400)
+....+++.++++. | .++.+++++++.|+..++.++.++||+|+++...|.+. ...++..|++++++ +.
T Consensus 70 p~~~~le~~lA~l~----g--~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~v-d~ 142 (403)
T PRK07810 70 PTVSMFEERLRLIE----G--AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFV-DG 142 (403)
T ss_pred chHHHHHHHHHHHh----C--CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEE-CC
Confidence 34556666666665 5 34788899999999999999999999999988666443 34567789999988 53
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
.|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....... ....+.
T Consensus 143 ------~d~~~l~~ai~~~t--klV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~----~~~~ga 207 (403)
T PRK07810 143 ------EDLSQWEEALSVPT--QAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR----GLPLGA 207 (403)
T ss_pred ------CCHHHHHHhcCcCc--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC----hhhcCC
Confidence 27889999998776 99999999999999999 9999999999999999999998654432 123356
Q ss_pred EEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
++++.|++|+++..|.++ |++++++ +.+.+.+..........++++.++.+...|+. +..+.++..+++.++.
T Consensus 208 Divv~S~tK~l~g~g~~~gG~v~~~~--~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----l~~R~~~~~~~a~~~a 281 (403)
T PRK07810 208 DVVVYSGTKHIDGQGRVLGGAILGDR--EYIDGPVQKLMRHTGPALSAFNAWVLLKGLET----LALRVRHSNASALRIA 281 (403)
T ss_pred cEEEccCCceecCCcCceeEEEEeCh--HHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHHHH
Confidence 899999999997667665 8888773 33334455544444556788888877777765 6788888899999999
Q ss_pred HHhccCCCC
Q 015768 303 EALSPLGEG 311 (400)
Q Consensus 303 ~~L~~~~~~ 311 (400)
+.|++++.+
T Consensus 282 ~~L~~~p~v 290 (403)
T PRK07810 282 EFLEGHPAV 290 (403)
T ss_pred HHHhcCCCc
Confidence 999988764
No 209
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.95 E-value=1.7e-24 Score=205.04 Aligned_cols=348 Identities=14% Similarity=0.094 Sum_probs=230.7
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+..... ......+....+++.+.+...-. .+.++|++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~--~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~ 114 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTC--HQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAV 114 (425)
T ss_pred CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcc--cCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence 5678899998875 3344 78999999999987632111 11112334455666666554322 26899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCC--CCCCC--CCHHHHHHhhc--
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCS--SKTLH--PDADWLEKTLE-- 160 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~--~~~~~--~~~e~l~~~l~-- 160 (400)
+.+++... ....+|+....+|++....... .|. .++.+ |.+ ..+.. -.++.+++.+.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~l~~~~~~~ 193 (425)
T PRK07495 115 ENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHV-PFPVELHGVSVEQSLAALDKLFKAD 193 (425)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEe-cCCcccccccHHHHHHHHHHHHHhc
Confidence 99999764 2346899999999887533211 110 12223 322 12211 12455576664
Q ss_pred -cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768 161 -TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 161 -~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 238 (400)
....+++|+++..+..+|. .+|.+++++|.++|++||+++|+||++.++...+........+....+.+++|.++ +|
T Consensus 194 ~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~-~G 272 (425)
T PRK07495 194 VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLA-GG 272 (425)
T ss_pred cCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhc-CC
Confidence 1234688888855444784 57999999999999999999999999998765553322222344455778999998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCccc
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVK 314 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 314 (400)
+++|+++.+ +++.+.+.......+++.+++.+.++.+.++..++ .+..++.+++.+++++.|++ ++.+.-+
T Consensus 273 ~pigav~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v 347 (425)
T PRK07495 273 FPLAAVTGR---AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE--EDLCERANQLGNRLKQRLASLRETVPEIADI 347 (425)
T ss_pred ccceEEEEc---HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHhhCCCeeee
Confidence 999999998 78877776555567888999999977777764211 23444455555555555543 3432223
Q ss_pred CCCCceEEEeeCCCCC---CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 315 GGEGAIYLWARLPEKH---LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~---~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
... |.++|+.+.... .+ ...+...++ ++|+.+.+... ..+.+||.+.. ++++++++++++|.++++++.
T Consensus 348 rG~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~g~--~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 348 RGP-GFMNAVEFNDADSGLPSAEFANRVRLKAL-EKGLILLTCGV--HGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred ecC-ceEEEEEEecCCCCCccHHHHHHHHHHHH-HCCeEEeecCC--CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 333 888888874321 01 234555554 79999965321 24889999887 899999999999999998764
No 210
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=5.6e-25 Score=193.87 Aligned_cols=312 Identities=21% Similarity=0.267 Sum_probs=205.8
Q ss_pred CCCC-CCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH--HHHHHhc-------CC-----CCEEEEeCCCccc
Q 015768 61 ISKY-GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV--NIVLTLC-------DA-----GDSVVMFAPYYFN 125 (400)
Q Consensus 61 ~~~y-~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~--~~~~~l~-------~~-----gd~vlv~~p~~~~ 125 (400)
..+| +...|.++.|+.+++.+ |+++++|++..+++.-+. .+.++++ +| .-+.|++.|+|..
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~ll----gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDR 136 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELL----GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDR 136 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHH----TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HH
T ss_pred ccCCCCccCChHHHHHHHHHHh----CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchH
Confidence 5579 88899999999999988 899999999877655443 2222221 11 2367999999999
Q ss_pred hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC-CCCCCccCCCHHHHHHHHHH-HHHcCCEEEEc
Q 015768 126 SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPERLLKRISDL-CKAAGSWLVVD 203 (400)
Q Consensus 126 ~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~-p~nptG~~~~~~~l~~i~~l-~~~~~~~li~D 203 (400)
+..+.+..|++.+.| |..++| +|+|.+++++.+++.+|.|+.+. .+||||.++|.|..++++++ +...+..|+-|
T Consensus 137 HFai~E~~Giemi~V-pM~~dG--PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WD 213 (425)
T PF12897_consen 137 HFAITEHFGIEMIPV-PMTEDG--PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWD 213 (425)
T ss_dssp HHHHHHHCT-EEEEE-EEETTE--E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE
T ss_pred HHHHHHhhCcEEEec-CCCCCC--CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEee
Confidence 999999999999999 999996 69999999998777789998773 48999999999999999998 34679999999
Q ss_pred cccccccc-CCCCcc-----------ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHH
Q 015768 204 NTYEYFMY-DGRKHC-----------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASII 271 (400)
Q Consensus 204 ~a~~~~~~-~~~~~~-----------~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~ 271 (400)
++|..... +..+.. ...+++++...|+||.. .+|.+++++.++ ++.++++.+.....+.++..+
T Consensus 214 NAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS---~~Nl~~~~~~~~~~tIgpdKv 289 (425)
T PF12897_consen 214 NAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAAS---EANLAWIKKHLSVQTIGPDKV 289 (425)
T ss_dssp -TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE----HHHHHHHHHHHHHH-S---HH
T ss_pred cCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecC---HHHHHHHHHHhcCceeCccHH
Confidence 99997665 222211 11368899999999987 699999999999 788888888777789999999
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHH----HHHHHH----HHHhc-cCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHH
Q 015768 272 SQHLALYSLQTGPEWVTERVKDLV----RNREII----REALS-PLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 272 ~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~l----~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
.|..-..++.+.+..+.+.+++++ -.-+.. .+.|. ..+..+|..|.+|+|+++...++ ...++.+ +++
T Consensus 290 NQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G--~AkrvV~-lak 366 (425)
T PF12897_consen 290 NQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG--TAKRVVE-LAK 366 (425)
T ss_dssp HHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT---HHHHHH-HHH
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC--hHHHHHH-HHH
Confidence 999999999873313333333332 233333 34444 34456899999999999998875 3667776 668
Q ss_pred hcCeEEeC-CCcc--C---CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 343 RHGVVVIP-GGAC--G---CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 343 ~~gi~v~~-g~~~--~---~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+.||.+.| |..| + ....|||+++..+.+|++.+++.+..+++-.
T Consensus 367 eAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 367 EAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVKLA 416 (425)
T ss_dssp HTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHHHH
T ss_pred HhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999988 5544 1 2468999999989999999999998877643
No 211
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=1.3e-24 Score=203.30 Aligned_cols=360 Identities=13% Similarity=0.062 Sum_probs=253.7
Q ss_pred hhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCC------CCCCCCCCcHHHHHHHHHHHHhh
Q 015768 11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSI------SKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
+...+...+.-+.+..+++.+.|+|-.++|.. ++.+++++...+.+... ..|+.....++++....++..+.
T Consensus 30 l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 30 ILHVEPRIAEAIRQELADQRSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHhhCHHHHHHHHHHHHHHhcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 33456667777777888889999998888775 58899988877765322 23444566678888888888999
Q ss_pred cCCCCCcEEEeCChHHHHHHHHHHhcCC-------------------------------CCEEEEeCCCccchhHH---H
Q 015768 85 NKLYKSSVMVTAGANQAFVNIVLTLCDA-------------------------------GDSVVMFAPYYFNSYMS---F 130 (400)
Q Consensus 85 ~~~~~~~i~~~~g~t~a~~~~~~~l~~~-------------------------------gd~vlv~~p~~~~~~~~---~ 130 (400)
+|.+.-+|...+|+ .|+..++.++++| ||+|+..++.+.++... .
T Consensus 108 f~a~~anvqp~Sg~-~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~ 186 (493)
T PRK13580 108 FGAEHAYVQPHSGA-DANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRP 186 (493)
T ss_pred hCCCcccccCCCcH-HHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCccc
Confidence 99887777766655 8999999999876 79999887776554321 1
Q ss_pred HhcC--cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 015768 131 QMTG--VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208 (400)
Q Consensus 131 ~~~g--~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~ 208 (400)
...| .+...+ +++++...+|.+.+++.+.+.+ +.|++++.+|- |...| +++|.++|+++|+++++|++|+.
T Consensus 187 n~~~~~~~~~~y-~vd~~~g~iD~d~l~~~~~~~~--plvii~g~S~~-~~~~d---l~~i~eia~~~gA~L~VD~AH~~ 259 (493)
T PRK13580 187 NISGKMFHQRSY-GVDPDTGLLDYDEIAALAREFK--PLILVAGYSAY-PRRVN---FAKLREIADEVGAVLMVDMAHFA 259 (493)
T ss_pred chhhheeeeEec-ccCcccCccCHHHHHHHHhhcC--CEEEEeCcccc-CCCcC---HHHHHHHHHHcCCEEEEECchhh
Confidence 1222 456666 7776656799999999998776 67777777776 45778 88999999999999999999997
Q ss_pred cccCCCCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC-c
Q 015768 209 FMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG-P 284 (400)
Q Consensus 209 ~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-~ 284 (400)
+..++.... ....+.+++++|+||++. |.+.|+++++ +++.+.+.........++.++...+++.++... .
T Consensus 260 Gligg~~~~~~~~~~~~~D~vtgT~hKaL~--GP~GG~I~~~---~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~ 334 (493)
T PRK13580 260 GLVAGKVFTGDEDPVPHADIVTTTTHKTLR--GPRGGLVLAK---KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEART 334 (493)
T ss_pred ceeccccchhhcCCCCCCcEEEeCChhhcc--CCCeEEEEec---HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhC
Confidence 776533221 122467899999999983 4446999988 778888854442222233333444444444431 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---C---CC
Q 015768 285 EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---C---RG 358 (400)
Q Consensus 285 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---~---~~ 358 (400)
..++++++++.++.++|++.|.+.|...+.+...+..+++.+.+...+...+...| .+.||.+.+-..+. + +.
T Consensus 335 ~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L-~e~GI~vn~i~~Ptvp~g~~~~s 413 (493)
T PRK13580 335 PEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESAL-LDAGIVTNRNSIPSDPNGAWYTS 413 (493)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHH-HHCCeEEccccCCCCCCCCCCCc
Confidence 22467889999999999999999887333332336777778865321233444444 68999997554432 1 56
Q ss_pred eEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Q 015768 359 HLRISFGG-----LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 359 ~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~ 386 (400)
.|||++.. ++++|++++++.|.++++..
T Consensus 414 rLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 414 GIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred eEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 89999764 35899999999999998765
No 212
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=1e-24 Score=207.10 Aligned_cols=343 Identities=13% Similarity=0.016 Sum_probs=228.2
Q ss_pred chHHHHHHHHHhcC-----CCeEEcCCCCCCCCCcHHHHHHHHHhhcCC---CCCCCCC-CCCcHHHHHHHHHHHHhhcC
Q 015768 16 MPIMVQIQELVRGA-----KNAVSLAQGVVYWQPPKMAMEKVKELVWDP---SISKYGA-DEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 16 ~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~-~~g~~~~~~~~a~~l~~~~~ 86 (400)
...+..++..|--. ++++.|+.+... +.|+.+.+++.+++... ....+.. ..+...+.+++.+ + +.+|
T Consensus 7 ~~~~~~~r~~f~~~~~~~~~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g 83 (406)
T TIGR01814 7 ADPLRALRDEFHLPKIGDENAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG 83 (406)
T ss_pred cChHHHHHHhcCCCcccCCCCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC
Confidence 44555666666433 678999977655 45888888887766431 1111111 1122233333333 3 5668
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC---CEEEEeCCCccchhH----HHHhcCcEE----EEeccCCCCCCCCCHHHH
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLCDAG---DSVVMFAPYYFNSYM----SFQMTGVTH----ILVGPCSSKTLHPDADWL 155 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~~~g---d~vlv~~p~~~~~~~----~~~~~g~~~----~~~~~~~~~~~~~~~e~l 155 (400)
+++++|++++|+|++++.++.++.+++ +.|++...+|++... .++..|+++ +.+ +.+.+ +.++++++
T Consensus 84 ~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-g~~~~~~l 161 (406)
T TIGR01814 84 AKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQI-EPREE-ETLRLEDI 161 (406)
T ss_pred CCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEe-ccCCC-CccCHHHH
Confidence 899999999999999999999986554 368888899988543 345668776 455 44433 35688999
Q ss_pred HHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc
Q 015768 156 EKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY 234 (400)
Q Consensus 156 ~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 234 (400)
++.++. ..+.++|++++++|.+|.+.| +++|.++|+++|+++++|++++.+. .+......+.+++++|.+|++
T Consensus 162 ~~~~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~---~~id~~~~gvD~~~~s~hK~l 235 (406)
T TIGR01814 162 LDTIEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGN---VPLDLHDWGVDFACWCTYKYL 235 (406)
T ss_pred HHHHHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCC---cccccccCCCCEEEEcCcccc
Confidence 888751 122489999999999999999 9999999999999999999999532 233333457789999999998
Q ss_pred C-CCcceeEEEEccCCcHHHHHHHHHhh-----------------------ccCCcCccHHHHHHHHHHhcCC-cHHHHH
Q 015768 235 G-MMGWRVGYIAYPSEVEGFATQLLKVQ-----------------------DNIPICASIISQHLALYSLQTG-PEWVTE 289 (400)
Q Consensus 235 g-~~g~~~G~i~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ 289 (400)
+ .+| .|.++.++ . ...+.... .....+++.+...++..+++.. ....++
T Consensus 236 ~g~pG--~~l~v~~~---~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~ 309 (406)
T TIGR01814 236 NAGPG--AGAFVHEK---H-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEA 309 (406)
T ss_pred CCCCC--eEEEEehh---h-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHH
Confidence 4 334 34334342 2 11121100 0012346667777777677642 122467
Q ss_pred HHHHHHHHHHHHHHHhccC----CCCcccCCCC----ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEE
Q 015768 290 RVKDLVRNREIIREALSPL----GEGAVKGGEG----AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLR 361 (400)
Q Consensus 290 ~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iR 361 (400)
..++...+.+++++.|+++ +++.+..+.. +..+.+.++ .+.+++...|. ++||.+.. ..++.+|
T Consensus 310 i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~-~~gi~v~~----~~~~~iR 381 (406)
T TIGR01814 310 LRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALI-KRGVIGDK----REPSVIR 381 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHH-HCCEEEec----cCCCeEE
Confidence 7788888888998888774 2344444321 234556666 24678888775 78998853 2357999
Q ss_pred EEe-cc-CCHHHHHHHHHHHHHHH
Q 015768 362 ISF-GG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 362 i~~-~~-~~~~~~~~~~~~l~~~l 383 (400)
+|+ +. +|++|++.+++.|++++
T Consensus 382 iS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 382 VAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EechhccCCHHHHHHHHHHHHHHh
Confidence 998 54 89999999999998764
No 213
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=3.7e-24 Score=202.67 Aligned_cols=362 Identities=16% Similarity=0.109 Sum_probs=235.8
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhh-cCCCCCCCCCC---CCcHHHHHHHHH---
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELV-WDPSISKYGAD---EGLPELRDALVK--- 79 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~-~~~~~~~y~~~---~g~~~~~~~~a~--- 79 (400)
+|+-++..+.....-+.+....+++.+++..+++.. +|.+++++...+ .+.. .+++.+ .| .+..+.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~-~g~~gsr~~~G-~~~~~~lE~~~~ 80 (416)
T PRK13034 5 FSDSLEEYDDEVFAAINKELERQQDHLELIASENFT--SPAVMEAQGSVLTNKYA-EGYPGKRYYGG-CEFVDEVEALAI 80 (416)
T ss_pred hhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCC--CHHHHHHhcchhhcCCC-CCCCCCcccCC-ChHHHHHHHHHH
Confidence 566665666666666666666778889998888775 799999998885 4321 111111 12 233444444
Q ss_pred -HHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccch-hHHHHh--cCcE--EEEeccCCCCCCCCCHH
Q 015768 80 -KLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNS-YMSFQM--TGVT--HILVGPCSSKTLHPDAD 153 (400)
Q Consensus 80 -~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~-~~~~~~--~g~~--~~~~~~~~~~~~~~~~e 153 (400)
.+++.+|.+ ..++++++|+.|+..++.++++|||+|+++..+|.+. ...++. .+.. ...+ +.+..+..+|++
T Consensus 81 ~~la~l~g~~-~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~d~~ 158 (416)
T PRK13034 81 ERAKQLFGCD-YANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQY-GVDRLTGLIDYD 158 (416)
T ss_pred HHHHHHhCCC-ceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEc-ccccccCCcCHH
Confidence 666666754 3335568899999999999999999999999999773 222221 1222 1345 555556678999
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA 233 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 233 (400)
++++.+.... +++|+++.+. +|...| +.+|.++|++||+++++|++|+.+..+...........+++++|++|+
T Consensus 159 ~le~~l~~~~-~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~ 232 (416)
T PRK13034 159 EVEELAKEHK-PKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKT 232 (416)
T ss_pred HHHHHHhhcC-CeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCccc
Confidence 9999886432 5888776543 578888 888888999999999999999876654322211113478999999999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCC-cCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
++ |...|++++++ +++.++++....... .+..++...++..++... .....++++++.++.++|++.|++.+.
T Consensus 233 l~--g~~GG~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~- 307 (416)
T PRK13034 233 LR--GPRGGMILTND--EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGY- 307 (416)
T ss_pred CC--CCCCeEEEECc--HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCC-
Confidence 94 22248777764 555566655433221 122333333333333321 122346678999999999999988855
Q ss_pred cccCC-CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC------ccCCCCeEEEEecc-----CCHHHHHHHHHHH
Q 015768 312 AVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG------ACGCRGHLRISFGG-----LVEDDCKAAADRL 379 (400)
Q Consensus 312 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~------~~~~~~~iRi~~~~-----~~~~~~~~~~~~l 379 (400)
.+..+ .....+.+.+.....+...+..+| +++||.+.+-. ....+..+|++++. ++++|++++++.|
T Consensus 308 ~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l 386 (416)
T PRK13034 308 DLVSGGTDNHLLLVDLRPKGLSGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWI 386 (416)
T ss_pred EeccCCCCCcEEEEEcCCCCCCHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHH
Confidence 44332 235667777665433455565656 58899997521 11235689999664 3589999999999
Q ss_pred HHHHHHH
Q 015768 380 RRGLEEL 386 (400)
Q Consensus 380 ~~~l~~~ 386 (400)
.+++.+.
T Consensus 387 ~~~~~~~ 393 (416)
T PRK13034 387 LDVLDDL 393 (416)
T ss_pred HHHHhcC
Confidence 9988743
No 214
>PLN02624 ornithine-delta-aminotransferase
Probab=99.95 E-value=1e-24 Score=209.33 Aligned_cols=344 Identities=13% Similarity=0.114 Sum_probs=226.1
Q ss_pred hcCCCeEEcCCCCCCC--C-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVVYW--Q-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~--~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+.... + .+|++++++.+.+.+...... .-..+...++++.+.+..+ .+.++++++|++|++
T Consensus 72 ~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~---~~~~~~~~~la~~L~~~~~--~~~~~f~~SGseA~e 146 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR---AFYNDKFPEFAEYLTSMFG--YDMVLPMNTGAEGVE 146 (474)
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc---ccCCHHHHHHHHHHHhhcC--CCeEEEeCChHHHHH
Confidence 4578899998876333 2 589999999999987432221 1122344556666665554 468999999999999
Q ss_pred HHHHHhcC--------C-C-CEEEEeCCCccchhHHHHhcCcEEEE---eccCCCC----CCCCCHHHHHHhhcc-CCCC
Q 015768 104 NIVLTLCD--------A-G-DSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSK----TLHPDADWLEKTLET-KPTP 165 (400)
Q Consensus 104 ~~~~~l~~--------~-g-d~vlv~~p~~~~~~~~~~~~g~~~~~---~~~~~~~----~~~~~~e~l~~~l~~-~~~~ 165 (400)
.+++.... + + ..|+....+|++..........+... +.|..+. .+ .|++.+++.++. ...+
T Consensus 147 ~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~i 225 (474)
T PLN02624 147 TAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEEDGDRI 225 (474)
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhCCCCE
Confidence 99986542 1 2 35788888888875443222211100 0011100 01 167889888863 2346
Q ss_pred eEEEEeCCCCCCccCCCHH-HHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEE
Q 015768 166 KLVSVVNPGNPSGTYIPER-LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI 244 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~~~~-~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i 244 (400)
++|+++.++|++|.+++.+ ++++|.++|++||+++|+||+|.++...+........+....+.+++|.+|.+++++|++
T Consensus 226 aaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav 305 (474)
T PLN02624 226 AAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAV 305 (474)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceee
Confidence 8888888999999987665 699999999999999999999987655443222111111122334689998566899999
Q ss_pred EccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CC-CcccCCCCc
Q 015768 245 AYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GE-GAVKGGEGA 319 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~ 319 (400)
+.+ +++.+.+.......+++.+++.+.++.+.|+...+ .+..++..++.+.+++.|+++ +. +....+. +
T Consensus 306 ~~~---~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~-G 379 (474)
T PLN02624 306 LAD---KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGR-G 379 (474)
T ss_pred eec---HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEee-E
Confidence 988 67777766555556777899999999988874221 123344455556666555543 21 2223344 4
Q ss_pred eEEEeeCCCCC---CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 320 IYLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 320 ~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.+..+.+.... ....+++..|. ++||.+.|+ .++++||+++. ++++++++++++|.+++++..
T Consensus 380 ~~~~i~l~~~~~~~~~a~~~~~~L~-e~GV~v~p~----~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~ 446 (474)
T PLN02624 380 LLNAVVLNSPKLGPVSAYDVCLKLK-ERGLLAKPT----HDTIIRLAPPLSISEDELQECSKALSDVLEHDL 446 (474)
T ss_pred EEEEEEecCCCcChHHHHHHHHHHH-hCCeEEecC----CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 44444453211 12456777764 899999885 36789999866 899999999999999997654
No 215
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.95 E-value=5.7e-25 Score=208.50 Aligned_cols=332 Identities=13% Similarity=0.132 Sum_probs=227.8
Q ss_pred hcCCCeEEcCCCCCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+++..... .+|++++++.+.+.+....+ .. ........+++.+.+.++ .+.++++++|++|++
T Consensus 34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~--~~-~~~~~~~~l~~~l~~~~~--~~~~~~~~SGs~A~e 108 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSS--RA-FYNDVFGEFAEYVTKLFG--YDKVLPMNTGAEAVE 108 (401)
T ss_pred CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccc--cc-cCCHHHHHHHHHHHhhcC--CCEEEEeCccHHHHH
Confidence 56788999988764433 58999999999887632111 11 122344556666665555 468999999999999
Q ss_pred HHHHHhc----------CCCCEEEEeCCCccch-hHHHHhcCc------------EEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 104 NIVLTLC----------DAGDSVVMFAPYYFNS-YMSFQMTGV------------THILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 104 ~~~~~l~----------~~gd~vlv~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
.++..+. ...+.|+....+|++. ...+...+- .++.+ |. .|++++++.++
T Consensus 109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~le~~l~ 181 (401)
T TIGR01885 109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKI-PY------NNLEALEEALE 181 (401)
T ss_pred HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEe-CC------CCHHHHHHHHH
Confidence 9999863 2236788888888764 444443321 12222 21 26888998886
Q ss_pred c-CCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCC
Q 015768 161 T-KPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGM 236 (400)
Q Consensus 161 ~-~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~ 236 (400)
. ....++|+++.+++++|...+ .+++++|.++|++||+++|+||+|.++...+..... .....+++ +++|.++.
T Consensus 182 ~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~--~~gK~l~~ 259 (401)
T TIGR01885 182 DHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV--LLGKALSG 259 (401)
T ss_pred hcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE--EeeccccC
Confidence 2 233577888888999999875 557999999999999999999999876554433211 11122333 46799985
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--Cccc
Q 015768 237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVK 314 (400)
Q Consensus 237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~ 314 (400)
+++++|+++.+ +++++.+.......+++.+++.+.++.++|+...+ ....++.+++.+++++.|++++. +...
T Consensus 260 g~~~ig~v~~~---~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~--~~l~~~~~~~~~~~~~~L~~l~~~~~~~~ 334 (401)
T TIGR01885 260 GVYPVSAVLAD---DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE--EKLAENAEKLGEIFRDQLKKLPKPIITEV 334 (401)
T ss_pred CCCCcEEEEEc---HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHhccCCceeEE
Confidence 55899999998 78887776533445677788999998888875222 13445677778899999988753 1222
Q ss_pred CCCCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
.+. +.+..+.++... .+..+++.+|. ++||.+.|+ .++.+||+++. ++++++++++++|.+++
T Consensus 335 ~g~-g~~~~i~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~----~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 335 RGR-GLLNAIVIDESKTGRTAWDLCLKLK-EKGLLAKPT----HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred eec-CeeEEEEeccCcchhHHHHHHHHHH-hCCEEEEec----CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 344 444444443321 24567888775 789999874 36789999876 79999999999998876
No 216
>PRK06460 hypothetical protein; Provisional
Probab=99.95 E-value=4.8e-25 Score=205.95 Aligned_cols=287 Identities=21% Similarity=0.148 Sum_probs=192.1
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccc----hhHHHHhcCcEEEEecc
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGP 142 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~ 142 (400)
.+...++++.++++. |.+ ..++ ++++++++..++.++.++||+|+++.|.|.+ +...++..|+++..+ +
T Consensus 44 ~p~~~~L~~~lA~l~----g~~-~~v~-~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~-~ 116 (376)
T PRK06460 44 NPTVLELTKKIVELE----NAE-MGVA-FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS-N 116 (376)
T ss_pred CccHHHHHHHHHHHh----CCC-cEEE-eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE-C
Confidence 355667777777766 553 3444 4666799999999999999999999876643 345677889998887 6
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 222 (400)
.++ .+.+++.+++++ ++|++++|+||+|.++| +++|.++|+++|+++|+|++|..+.. ......+
T Consensus 117 ~~~------~~~l~~~~~~~t--klV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~~----~~~l~~~ 181 (376)
T PRK06460 117 PGS------DNIIEKAKSKRY--DVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPIN----QKPLELG 181 (376)
T ss_pred CCC------HHHHHHhcCCCc--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCcccc----CChhhcC
Confidence 542 234555444544 99999999999999999 67888999999999999999975421 1122335
Q ss_pred cEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 223 HVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 223 ~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
.++++.|+||+++. .+.++||++.+ +++++++...+.....+.++...+ .+++ +.++++.+++++.++++++
T Consensus 182 ~divv~S~sK~l~G~~~~~~G~~~~~---~~l~~~l~~~~~~~g~~~~~~~a~---~~l~-~~~~l~~r~~~~~~n~~~l 254 (376)
T PRK06460 182 ADIVVHSASKFLAGHNDVIAGLAAGY---GKLLNVIDQMRRTLGTSLDPHAAY---LTLR-GIKTLKIRMDVINRNAEQI 254 (376)
T ss_pred CCEEEeecceeccCCCCceEEEEecC---HHHHHHHHHHHHhcCCCCCHHHHH---HHHh-chhhHHHHHHHHHHHHHHH
Confidence 67999999999952 23679999988 788888887665555444543322 2333 3577888999999999999
Q ss_pred HHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCC----------Cc-
Q 015768 302 REALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG----------GA- 353 (400)
Q Consensus 302 ~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g----------~~- 353 (400)
.+.|++++.+. +..| ..|-.+.+.+.....+..++++.+ +=..+.+.-| ..
T Consensus 255 ~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l-~~~~~~~s~Gg~~sl~~~p~~~~ 333 (376)
T PRK06460 255 AEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSL-KLIIPAQTLGGVNSVISHPATMS 333 (376)
T ss_pred HHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhC-CcceeccCCCCCceEEeCccccc
Confidence 99999876532 2222 123455566653211122333322 0001111111 00
Q ss_pred ---c--------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 354 ---C--------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 354 ---~--------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+ + .++.+|+|++. ||.+++++.|.+|+..+
T Consensus 334 ~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 334 HRTLSLEERKIVGITDSLLRLSVGI---EDVNDLIEDLDRALSTL 375 (376)
T ss_pred cccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 0 0 14689999997 66778888888888754
No 217
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.95 E-value=7.8e-25 Score=205.14 Aligned_cols=214 Identities=21% Similarity=0.235 Sum_probs=163.8
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~ 143 (400)
+....+++.++++. |. +++++++++++|+..++.++.++||+|+++.+.|.+.. ..++..|+++..+ +.
T Consensus 54 p~~~~le~~la~l~----g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v-~~ 126 (380)
T TIGR01325 54 PTVAAFEERIAALE----GA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFV-DP 126 (380)
T ss_pred chHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEE-CC
Confidence 33555666666654 54 56788999999999999999999999999999887644 3456789998888 54
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
+ |++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|..+.... ....+.
T Consensus 127 ~------d~~~l~~~i~~~t--klV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~----pl~~g~ 191 (380)
T TIGR01325 127 T------DLNAWEAAVKPNT--KLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ----PLKLGA 191 (380)
T ss_pred C------CHHHHHHhcCCCc--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC----chhhCC
Confidence 3 6888988887665 99999999999999999 8999999999999999999998544322 123356
Q ss_pred EEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
++++.|++|+++.+|.++ |+++.+ +++++.+...........++...+.+...++ .+..++++..+++..+.
T Consensus 192 Divv~S~sK~l~g~g~~~gG~vv~~---~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~----tl~~r~~~~~~~a~~la 264 (380)
T TIGR01325 192 DVVVYSATKHIDGQGRVMGGVIAGS---EELMAEVAVYLRHTGPAMSPFNAWVLLKGLE----TLSLRMQKQFDSALAIA 264 (380)
T ss_pred CEEEeeccceecCCCCeEEEEEEeC---HHHHHHHHHHHHhhCCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHH
Confidence 799999999998667665 777777 6777777765544444455555554444444 36677888899999999
Q ss_pred HHhccCCC
Q 015768 303 EALSPLGE 310 (400)
Q Consensus 303 ~~L~~~~~ 310 (400)
+.|++++.
T Consensus 265 ~~L~~~p~ 272 (380)
T TIGR01325 265 EWLQAQPQ 272 (380)
T ss_pred HHHHcCCC
Confidence 99998875
No 218
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.95 E-value=4.2e-24 Score=200.31 Aligned_cols=330 Identities=18% Similarity=0.114 Sum_probs=213.2
Q ss_pred CCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC-------CCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCCh
Q 015768 29 AKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS-------ISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGA 98 (400)
Q Consensus 29 ~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~-------~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~ 98 (400)
..++++|++++ .++..++++.+++.+++.+.. .+..+ ...|...+.+++++.+++.+|.+ +.++ .+++
T Consensus 3 ~~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~-~~sG 80 (370)
T PRK05937 3 ESLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFI-VPSG 80 (370)
T ss_pred CCceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEE-ECCh
Confidence 35789998876 888788888888777765531 11111 11234455555566666555753 3344 4445
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCC
Q 015768 99 NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPG 174 (400)
Q Consensus 99 t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~ 174 (400)
+.++..++..+.++||.|++..-+|.+....++......+.+ + ..|++++++.++.. ...++|++++++
T Consensus 81 ~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~-~------~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~ 153 (370)
T PRK05937 81 YMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSF-R------HNDLDHLESLLESCRQRSFGRIFIFVCSVY 153 (370)
T ss_pred HHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEe-c------CCCHHHHHHHHHhhhccCCCcEEEEEecCC
Confidence 577777777777788999998999988888887654444444 2 24889999988731 123577788999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~ 250 (400)
|++|.+.| +++|.++|+++|+++++|++|+.+.++.... .....+.++++.|+||.+|..| +.++..
T Consensus 154 s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~--- 224 (370)
T PRK05937 154 SFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSS--- 224 (370)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcC---
Confidence 99999999 8899999999999999999998654432111 0111223467889999998656 334444
Q ss_pred HHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC
Q 015768 251 EGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE 328 (400)
Q Consensus 251 ~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 328 (400)
++..+.+... ...++.+.+++...++..+++...+......++++++++++.+.|+..+. +....+.++.
T Consensus 225 ~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~~--------~~~~~i~~~~ 296 (370)
T PRK05937 225 SEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAAP--------GCVQPIFLPG 296 (370)
T ss_pred HHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCCC--------CCEEEEEeCC
Confidence 3444444321 11233445666666665666531111234556777888888887764321 1111233432
Q ss_pred CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+...+...| .++||.+..... ...+++|++++. +|++|++.+++.|+++++++.+
T Consensus 297 --~~~~~~~~~L-~~~gi~v~~~~~-~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 297 --ISEQELYSKL-VETGIRVGVVCF-PTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred --hhHHHHHHHH-HHCCeeEEeeCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 2356677666 578998874322 235689999998 8999999999999999987543
No 219
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=1e-24 Score=204.59 Aligned_cols=284 Identities=18% Similarity=0.121 Sum_probs=202.5
Q ss_pred HHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCCC
Q 015768 75 DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHP 150 (400)
Q Consensus 75 ~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~ 150 (400)
+++++.+++..| .+++++++|+++|+..++.+++++||+|+++.|+|.++.. .++..|++++++ +..
T Consensus 68 ~~Le~~lA~l~g--~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v-d~~------ 138 (394)
T PRK07050 68 LALAQRLAEIEG--GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFY-DPL------ 138 (394)
T ss_pred HHHHHHHHHHhC--CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEE-CCC------
Confidence 344444444446 4689999999999999999999999999999999988664 456789998888 432
Q ss_pred CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc
Q 015768 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF 230 (400)
Q Consensus 151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~ 230 (400)
+.+.+++.+++++ |+|++++|+||+|.+.+ +++|.++|+++|+++|+|++|..... ......+.++++.|+
T Consensus 139 ~~~~l~~~i~~~t--klV~le~p~Np~~~~~d---i~~I~~ia~~~gi~livD~a~a~~~~----~~~l~~GaDi~v~S~ 209 (394)
T PRK07050 139 IGAGIADLIQPNT--RLIWLEAPGSVTMEVPD---VPAITAAARARGVVTAIDNTYSAGLA----FKPFEHGVDISVQAL 209 (394)
T ss_pred CHHHHHHhcCCCC--eEEEEECCCCCCccHhh---HHHHHHHHHHcCCEEEEECCcccccc----cCHHHcCCeEEEEEC
Confidence 3467888888766 99999999999987766 99999999999999999999975432 122334568999999
Q ss_pred ccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768 231 SKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309 (400)
Q Consensus 231 sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (400)
+|.++ ..+.+.|+++..+ +++.+++...+.....+.++...+.+...++. +..+++++.+++.++.+.|++++
T Consensus 210 tK~~~g~~~~~gG~v~~~~--~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t----l~~Rl~~~~~~a~~la~~L~~~p 283 (394)
T PRK07050 210 TKYQSGGSDVLMGATITAD--AELHAKLKLARMRLGIGVSADDCSLVLRGLPS----LQVRLAAHDRSALEVAEWLKARP 283 (394)
T ss_pred CceecCCCCeeEEEEEECC--HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99995 2445689888765 78888888777655666677666655555543 56677888888888999888776
Q ss_pred CCc-ccCC----------------CCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccC---------------
Q 015768 310 EGA-VKGG----------------EGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG--------------- 355 (400)
Q Consensus 310 ~~~-~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~--------------- 355 (400)
.+. +..| ..+..+.+.+.... .+..++.+.| +..++.+.-|....
T Consensus 284 ~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~~ 362 (394)
T PRK07050 284 EIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEAL-ELFAIGWSWGGACSLAMPYDVASMRTAKW 362 (394)
T ss_pred CccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcC-CCCeeccccCCccceEeeCcccccchhhc
Confidence 532 1111 12334445554321 2344555554 35555554443221
Q ss_pred --CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 356 --CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 356 --~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++.+|||++. |+.+++++.|.+++...
T Consensus 363 ~~~~~~iR~svGl---E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 363 PHRGTLVRLYIGL---EDEADLIADLEQALEAA 392 (394)
T ss_pred CCCCCEEEEEeCc---CCHHHHHHHHHHHHHHh
Confidence 12579999997 66777888888888764
No 220
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.95 E-value=1.5e-24 Score=203.56 Aligned_cols=285 Identities=20% Similarity=0.186 Sum_probs=197.1
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~ 143 (400)
+....+++.++++. |. +..++++++++|+..++.++.++||+|+++.|.|.+.. ..+...|+++..+ +.
T Consensus 59 p~~~~le~~lA~l~----g~--~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~v-d~ 131 (391)
T TIGR01328 59 PTVSNLEGRIAFLE----GT--EAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFI-NM 131 (391)
T ss_pred chHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEE-CC
Confidence 34556777777766 54 34788888899999999999999999999999887544 3445688888888 55
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
+ |++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....... ....+.
T Consensus 132 ~------d~e~l~~~i~~~t--klV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~----~~~~g~ 196 (391)
T TIGR01328 132 A------IPEEVKAHIKDNT--KIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN----PVALGV 196 (391)
T ss_pred C------CHHHHHHhhccCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC----chhcCC
Confidence 3 6888999887766 99999999999999999 8889999999999999999998544322 123356
Q ss_pred EEEEeccccccCCCcce-eEEEEccCCcHHHHHHHHHhhc--cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
++++.|++|.+|.+|.+ .|+++.+ +++++++..... .....+++...+.+...|+. +..++++..+++..
T Consensus 197 Divv~S~sK~lgg~g~~~gG~v~~~---~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t----l~~r~~~~~~na~~ 269 (391)
T TIGR01328 197 DVVVHSATKYIGGHGDVVAGLICGK---AELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT----LNIRMKRHSENAMK 269 (391)
T ss_pred CEEEccccccccCCCCceEEEEEcC---HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc----HHHHHHHHHHHHHH
Confidence 68999999999877765 5777776 788877765322 22334566666655555544 56677888889999
Q ss_pred HHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------
Q 015768 301 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-------- 355 (400)
Q Consensus 301 l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-------- 355 (400)
+.+.|++++.+. +..| ..+-.+.+.+........++.+.| +=..+...-|....
T Consensus 270 la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l-~~~~~~~s~G~~~sl~~~~~~~ 348 (391)
T TIGR01328 270 VAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNL-KLIRLAVSLGDAETLIQHPASM 348 (391)
T ss_pred HHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhC-CcceEecCCCCCcccCcCCCcc
Confidence 999999877532 1111 123355566652111122333322 11112222222210
Q ss_pred ---------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 356 ---------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 356 ---------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.++.+|||++. |+.+++++.|.+++..
T Consensus 349 ~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 349 THAVVPKEEREAAGITDGMIRLSVGL---EDADDLIADLKQALDA 390 (391)
T ss_pred ccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHHHhh
Confidence 13579999997 6677888889888875
No 221
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.94 E-value=4.9e-24 Score=198.96 Aligned_cols=310 Identities=17% Similarity=0.236 Sum_probs=215.8
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~ 123 (400)
+++.++++.+.+..+.. + +...+++++++++++..|. +++++|+|+|+|+..++.++ .+|||+|+++.++|
T Consensus 10 ~~~e~~a~~~~~~~~~~--~----~~g~~~~~~e~~la~~~g~--~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~ 81 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL--S----GDGPFSRRCETWLENRTGT--KKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTF 81 (376)
T ss_pred CHHHHHHHHHHHHcCCc--c----CCcHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCc
Confidence 46678888888876432 1 1234566666766666564 67999999999999999988 79999999999999
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
.++...+...|++++.+ +.+++++.+|++.+++.+++++ ++|+ |+||+|...+ +.+|.++|++||+++|+|
T Consensus 82 ~~~~~~~~~~G~~~v~v-d~d~~~~~~d~~~le~~i~~~t--k~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD 152 (376)
T TIGR02379 82 VSTANAFVLRGAKIVFV-DIRPDTMNIDETLIESAITHRT--KAIV---PVHYAGVACD---MDTIMALANKHQLFVIED 152 (376)
T ss_pred HHHHHHHHHcCCEEEEE-ecCCCcCCCCHHHHHHhcCcCc--eEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence 99999999999999999 9988888899999999998765 8886 6678999999 889999999999999999
Q ss_pred ccccccc-cCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----------------
Q 015768 204 NTYEYFM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---------------- 264 (400)
Q Consensus 204 ~a~~~~~-~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~---------------- 264 (400)
++++.+. +.+.+. .... ++.++|| +|.+. +|.+.|++++++ +++.++++.++...
T Consensus 153 aa~~~g~~~~~~~~-g~~~--~~~~fSf~~~K~l~-~g~~gG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 226 (376)
T TIGR02379 153 AAQGVMSTYKGRAL-GSIG--HLGTFSFHETKNYT-SGGEGGALLIND--QAFIERAEIIREKGTNRSQFFRGEVDKYTW 226 (376)
T ss_pred CccccCCccCCccc-CCCC--CEEEEeCCCCCcCc-ccCCceEEEECC--HHHHHHHHHHHHhCCCCccccccCCCccee
Confidence 9998765 443322 1111 2334444 47774 677889998887 78888887665311
Q ss_pred -----CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC---CCccc--CCC--Cc-eEEEeeCCCCCC
Q 015768 265 -----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EGAVK--GGE--GA-IYLWARLPEKHL 331 (400)
Q Consensus 265 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~--~~~--~~-~~~~~~~~~~~~ 331 (400)
.+.++.+....+...|+ .+++..++-++++++..+.|.++. ..... .+. .. .++++.++.. .
T Consensus 227 ~~~g~n~~~~~~~Aa~g~~qL~----~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~ 301 (376)
T TIGR02379 227 RDIGSSYLPSELQAAYLWAQLE----QADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE-D 301 (376)
T ss_pred eeecccCCccHHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc-C
Confidence 12233344333333343 355565666666666777776643 11111 111 11 2345666543 2
Q ss_pred CHHHHHHHHHHhcCeEEeCCCcc----------C--C----------CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 332 DDFEVVRWLAHRHGVVVIPGGAC----------G--C----------RGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 332 ~~~~~~~~l~~~~gi~v~~g~~~----------~--~----------~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+.+++...|. ++||.+.+.... . . ...+.+-++. +++++++..++.|++++
T Consensus 302 ~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 302 DRNELIKYLK-EQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred CHHHHHHHHH-HCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 5788888775 889987643211 0 0 2346666665 89999999999998864
No 222
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=1.4e-24 Score=203.56 Aligned_cols=287 Identities=19% Similarity=0.136 Sum_probs=198.2
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEec
Q 015768 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVG 141 (400)
Q Consensus 66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~ 141 (400)
+.+....++++++++. |.+ ..++++++++|+..++.++.++||+|+++.|+|.+....+. ..|+++..+
T Consensus 59 ~~p~~~~Le~~lA~~~----g~~--~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~- 131 (388)
T PRK07811 59 GNPTRTALEEQLAALE----GGA--YGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV- 131 (388)
T ss_pred CCccHHHHHHHHHHHh----CCC--ceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEe-
Confidence 3456777888888876 443 33555677899999999999999999999999987655443 357777777
Q ss_pred cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC
Q 015768 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG 221 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 221 (400)
+. .|++.+++.+++++ |+|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...... ....
T Consensus 132 d~------~d~e~l~~~i~~~t--klV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~~----p~~~ 196 (388)
T PRK07811 132 DL------SDLDAVRAAITPRT--KLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQQ----PLAL 196 (388)
T ss_pred CC------CCHHHHHHhcCcCC--eEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccCC----chhh
Confidence 43 37899999998765 99999999999999988 8999999999999999999998654321 1233
Q ss_pred CcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 222 DHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 222 ~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+.++++.|++|+++.+| .+.||++.++ +++.+++...+.......++...+.+...|+. +..++++..++...
T Consensus 197 gaDivv~S~sK~l~g~~~~~gG~vv~~~--~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t----l~~R~~~~~~na~~ 270 (388)
T PRK07811 197 GADVVVHSTTKYIGGHSDVVGGALVTND--EELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT----LAVRMDRHSENAEA 270 (388)
T ss_pred CCcEEEecCceeecCCCCcEEEEEEECC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc----HHHHHHHHHHHHHH
Confidence 56799999999997543 5689988765 67777776665544445555655555555554 56777788889999
Q ss_pred HHHHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc---------
Q 015768 301 IREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------- 354 (400)
Q Consensus 301 l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------- 354 (400)
+.+.|++++.+. +..|. .|-.+.+.+........++...|. =..+.+.-|...
T Consensus 271 la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~-~~~~~~s~G~~~sl~~~~~~~ 349 (388)
T PRK07811 271 VAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTK-VFTLAESLGGVESLIEHPSAM 349 (388)
T ss_pred HHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCC-cceeeccCCCCcceEeCCccc
Confidence 999999887632 22111 234566677532112223333221 112222222211
Q ss_pred ----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 355 ----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 355 ----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+ .++.+|||++. |+.+++++.|.+|+.
T Consensus 350 ~~~~~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~ 387 (388)
T PRK07811 350 THASTAGSQLEVPDDLVRLSVGI---EDVADLLADLEQALG 387 (388)
T ss_pred CcccCCHhhcCCCCCEEEEEeCC---CCHHHHHHHHHHHhh
Confidence 0 14589999997 566778888888875
No 223
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=1.1e-24 Score=203.86 Aligned_cols=283 Identities=21% Similarity=0.181 Sum_probs=199.1
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH---HhcCcEEEEeccC
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPC 143 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~ 143 (400)
.+...++++.+++++ | .+++++++|+++|+..++.++.++||+|+++.+.|.+....+ +..|+++..+ +
T Consensus 52 np~~~~lE~~lA~l~----g--~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~-~- 123 (385)
T PRK08574 52 NPTLRPLEEALAKLE----G--GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLA-Y- 123 (385)
T ss_pred CccHHHHHHHHHHHh----C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEE-C-
Confidence 345666777777766 5 357788899999999999999999999999999999887665 4457777665 2
Q ss_pred CCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768 144 SSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 222 (400)
++.+.+++.+++ ++ ++|++++|+||+|.++| +++|.++|+++|+++|+|++++..... .....+
T Consensus 124 ------~d~~~l~~~i~~~~t--klV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l~~G 188 (385)
T PRK08574 124 ------PSTEDIIEAIKEGRT--KLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY----RPLRHG 188 (385)
T ss_pred ------CCHHHHHHhcCccCc--eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----ChhhhC
Confidence 357889998876 55 99999999999999999 889999999999999999999643321 122345
Q ss_pred cEEEEeccccccCCCcc-eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 223 HVVNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 223 ~~i~~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
.++++.|++|+++.+|- -.|+++..+ +++.+++...+......++++..+.+...++. +..+.++..+++..+
T Consensus 189 aDivv~S~sK~l~g~~d~~gG~vi~~~--~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t----L~~R~~~~~~na~~l 262 (385)
T PRK08574 189 ADFVVHSLTKYIAGHNDVVGGVAVAWS--GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT----LEVRFERQCRNAMAI 262 (385)
T ss_pred CcEEEeeCceeecCCCCceeEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc----HHHHHHHHHHHHHHH
Confidence 68999999999974553 357666554 67888887666655556666666655555554 667788888899999
Q ss_pred HHHhccCCCCc-ccCC------------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCccC----
Q 015768 302 REALSPLGEGA-VKGG------------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGACG---- 355 (400)
Q Consensus 302 ~~~L~~~~~~~-~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~~---- 355 (400)
.+.|++++.+. +..| ..|-.+.+.+... .++ +..+++.-.+. +.-|....
T Consensus 263 a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~---~~~-~~~~~~~l~l~~~~~s~G~~~sl~~~ 338 (385)
T PRK08574 263 AEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGG---RDA-VLKFLRSLKLIKPSPSLGGVESLATY 338 (385)
T ss_pred HHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCC---HHH-HHHHHHcCCcceEccCCCCCcceeeC
Confidence 99999877532 2111 1244556666521 222 22233322322 22222210
Q ss_pred -------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 356 -------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 356 -------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.++.+|||++. |+.+++++.|.+|+.+
T Consensus 339 ~~~~~~~~~~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~al~~ 384 (385)
T PRK08574 339 PVKSAASPIPEEDRKALGITEDLVRLSVGL---EDVEDLIEDLDQALGS 384 (385)
T ss_pred CCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhc
Confidence 13579999997 6677888888888864
No 224
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=4.3e-24 Score=204.71 Aligned_cols=357 Identities=15% Similarity=0.070 Sum_probs=236.6
Q ss_pred hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCC-----CC-CCCcHHHHHHHHHHHHhhcC
Q 015768 13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY-----GA-DEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y-----~~-~~g~~~~~~~~a~~l~~~~~ 86 (400)
..+.....-+...-+.+++.++|..+++.. +|.|++++...+.+....++ .. ....+.+.+...+.+++.+|
T Consensus 17 ~~d~~~~~~~~~~~~~~~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~ 94 (452)
T PTZ00094 17 EADPELYELIEKEKERQIEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFG 94 (452)
T ss_pred hhCHHHHHHHHHHHHHHHcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhC
Confidence 333444444444445567889998888775 58899999888865321111 11 11123333334456777778
Q ss_pred CCCCcEEEe---CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh----------cCcEEEEeccCCCCCCCCCHH
Q 015768 87 LYKSSVMVT---AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----------TGVTHILVGPCSSKTLHPDAD 153 (400)
Q Consensus 87 ~~~~~i~~~---~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~e 153 (400)
.+++++.++ +|+++++..++.++.++||+|++....|.++...... .++++..+ +.+.+| .+|++
T Consensus 95 a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~-~~~~~g-~id~~ 172 (452)
T PTZ00094 95 LDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPY-QVNEKG-LIDYD 172 (452)
T ss_pred CCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeec-ccCCCC-CcCHH
Confidence 888887666 7899999999999999999999998888776543321 11344455 566554 68999
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA 233 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 233 (400)
++++.++... ++++++. ++.+|...| +.+|.++|+++|+++++|++|+.+............+.+++++|++|+
T Consensus 173 ~L~~~l~~~~-~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~ 246 (452)
T PTZ00094 173 KLEELAKAFR-PKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKS 246 (452)
T ss_pred HHHHHHHHhC-CCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccC
Confidence 9999996432 4777654 345999999 888889999999999999999866553321111112578999999998
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHh----h-ccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 234 YGMMGWRVGYIAYPSEVEGFATQLLKV----Q-DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~----~-~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
++ |.+.|++..++ ++.+.+... . .....+++.....++..+++.. ....+++.+++.++++++.+.|++
T Consensus 247 l~--GP~Gg~l~~~~---~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~ 321 (452)
T PTZ00094 247 LR--GPRSGLIFYRK---KVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEK 321 (452)
T ss_pred CC--CCCceEEEEec---ccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 84 33347777763 332222211 1 1112255666667777777653 233567788899999999999987
Q ss_pred CCCCcccCCC-CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe-CCCccC----CCCeEEEEecc-CC----HHHHHHHH
Q 015768 308 LGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-PGGACG----CRGHLRISFGG-LV----EDDCKAAA 376 (400)
Q Consensus 308 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-~g~~~~----~~~~iRi~~~~-~~----~~~~~~~~ 376 (400)
.+. .+..+. ......+.+.....+...+...| +++||.+. ++..+. .++++|++++. ++ ++|++.++
T Consensus 322 ~g~-~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~ 399 (452)
T PTZ00094 322 RGY-DLVTGGTDNHLVLVDLRPFGITGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVA 399 (452)
T ss_pred CCc-EEecCCCCCceEeecCCcCCCCHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHH
Confidence 643 443321 12345555554334667777765 57899994 444432 35799999976 44 89999999
Q ss_pred HHHHHHHHHH
Q 015768 377 DRLRRGLEEL 386 (400)
Q Consensus 377 ~~l~~~l~~~ 386 (400)
+.|.+++...
T Consensus 400 ~~l~~~~~~~ 409 (452)
T PTZ00094 400 DFLDRAVKLA 409 (452)
T ss_pred HHHHHHHHHH
Confidence 9999999854
No 225
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.94 E-value=2.7e-24 Score=200.28 Aligned_cols=280 Identities=23% Similarity=0.203 Sum_probs=199.8
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEec
Q 015768 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVG 141 (400)
Q Consensus 66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~ 141 (400)
+.+....++++++++. .++.++++++++|+..++.++.++||+|+++.|+|+++...+ +..|++++.+
T Consensus 49 ~~p~~~~Le~~lA~l~-------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v- 120 (366)
T PRK07582 49 SNPTWRALEAALGELE-------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREA- 120 (366)
T ss_pred CCccHHHHHHHHHHHc-------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEE-
Confidence 4566778888888775 245667777789999999999999999999999998876544 4579999988
Q ss_pred cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC
Q 015768 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG 221 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 221 (400)
+.+++. + .+.+++ ++|++++|+||+|.+.+ +++|+++|+++|+++++|++|.... +..+ ...
T Consensus 121 ~~~~~~-----~----~~~~~t--~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~-~~~p---~~~ 182 (366)
T PRK07582 121 PTAGMA-----E----AALAGA--DLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL-GQRP---LEL 182 (366)
T ss_pred CCCChH-----H----HhccCc--eEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-ccCc---hhc
Confidence 654321 1 122344 99999999999999988 9999999999999999999986321 1111 223
Q ss_pred CcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 222 DHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 222 ~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+.+++++|++|+++ .+|+++||++.++ +++.+++...+......++++..+.+...++. +..+.++..+++..
T Consensus 183 g~Divv~S~sK~l~G~~g~~~G~v~~~~--~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t----l~~R~~~~~~na~~ 256 (366)
T PRK07582 183 GADLVVASDTKALTGHSDLLLGYVAGRD--PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT----LGLRFARQCANALA 256 (366)
T ss_pred CCcEEEecccccccCCCCeeEEEEEcCc--HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----HHHHHHHHHHHHHH
Confidence 45689999999994 4678999999765 68888888776655666777877777777764 56677888899999
Q ss_pred HHHHhccCCCCc-ccC------C----------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe---CCCcc------
Q 015768 301 IREALSPLGEGA-VKG------G----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI---PGGAC------ 354 (400)
Q Consensus 301 l~~~L~~~~~~~-~~~------~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~---~g~~~------ 354 (400)
+.+.|++++.+. +.. | ..+-.+.+.+. +.++... +++..++... -|...
T Consensus 257 la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~-~~~~l~~~~~~~s~G~~~sl~~~~ 331 (366)
T PRK07582 257 VAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAER-FVAASRLVVAATSFGGVHTSADRR 331 (366)
T ss_pred HHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHH-HHHhCCcceecccCCCccchhhhH
Confidence 999999887632 221 2 02345556664 2444444 4456666543 11111
Q ss_pred ---C---CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 355 ---G---CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 355 ---~---~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+ .++.||+|++. |+.++.++.|+++++.
T Consensus 332 ~~~~~~~~~~liR~svGl---E~~~dli~dl~~al~~ 365 (366)
T PRK07582 332 ARWGDAVPEGFVRLSCGI---EDTDDLVADLERALDA 365 (366)
T ss_pred HHcCCCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 0 13579999997 4556777888888764
No 226
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.94 E-value=2.3e-24 Score=201.50 Aligned_cols=283 Identities=20% Similarity=0.166 Sum_probs=204.0
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCC
Q 015768 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTL 148 (400)
Q Consensus 73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~ 148 (400)
.++++++.+++.+|. ++++++++++.++..++. +.++||+|+++.+.|.++... ++..|++++.+ +.+
T Consensus 48 ~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-d~~---- 119 (378)
T TIGR01329 48 TRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHV-DTT---- 119 (378)
T ss_pred HHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEe-CCC----
Confidence 356666666666675 567777777889988776 779999999999999887653 45679999888 542
Q ss_pred CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
|++.+++.+++++ |+|++++|+||+|.+.+ +++|+++|+++|+++|+|+++..... ......+.+++++
T Consensus 120 --d~~~le~~i~~~t--klv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~~----~~~l~~g~Di~v~ 188 (378)
T TIGR01329 120 --DLDKVKAALGPKT--KLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPLL----CNPLELGADIVYH 188 (378)
T ss_pred --CHHHHHHhcCcCc--eEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCccccc----CChhhcCCcEEEE
Confidence 7889999998665 99999999999999999 99999999999999999999863322 1122335679999
Q ss_pred ccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 229 SFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 229 s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
|++|+++. .+...|+++.++ +++.+++...+.......++...+.+...++ .+..+.++..+++..+.+.|++
T Consensus 189 S~tK~l~G~~~~~~G~v~~~~--~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~----tl~~R~e~~~~na~~la~~L~~ 262 (378)
T TIGR01329 189 SATKFLAGHSDVMAGVLAVKG--EEIAKKVYFLQNSTGSGLAPFDCWLLLRGIK----TLAIRIEKQQENARAIAMFLST 262 (378)
T ss_pred ecceeccCCccceeEEEEeCc--HHHHHHHHHHHHhcCCcCCHHHHHHHHccCC----CHHHHHHHHHHHHHHHHHHHHh
Confidence 99999953 346789998764 5676777766653444455554444333443 3677888888888888888887
Q ss_pred CCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---------------
Q 015768 308 LGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------------- 355 (400)
Q Consensus 308 ~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------------- 355 (400)
++.+. +..| ..+..+.+.+. ......+++..| +..++.++-|....
T Consensus 263 ~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-~~~~~~~~~~~L-~~~~i~~s~G~~~sl~~~p~~~~~~~~~~ 340 (378)
T TIGR01329 263 HPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-SVALSKRLVEAT-KLFSITVSFGSVNSLISMPCFMSHASIPA 340 (378)
T ss_pred CCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-CHHHHHHHHHhC-cCcccccCCCCCCceeeCCCccccccCCH
Confidence 66521 1111 12345556663 221256777777 57788887776541
Q ss_pred --------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 356 --------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 356 --------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.++.+|||++. |+.+++++.|.++|.+
T Consensus 341 ~~~~~~gi~~~liR~svGl---E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 341 EVREERGLPEDLVRLSVGI---EDVDDLISDLDIAFVT 375 (378)
T ss_pred HHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHh
Confidence 13689999997 6777888899998874
No 227
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.94 E-value=1.1e-23 Score=197.62 Aligned_cols=310 Identities=14% Similarity=0.100 Sum_probs=215.3
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~ 123 (400)
+++.++++.+.+..+.. + ..+...++++++++++ |. +++++++|+|+|+..++.++ .++||+|+++.++|
T Consensus 13 ~~~e~~~~~~~l~~~~~--~-~g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~ 83 (379)
T PRK11658 13 GDEELAAVKEVLRSGWI--T-TGPKNQALEQAFCQLT----GN--QHAIAVSSATAGMHITLMALGIGPGDEVITPSLTW 83 (379)
T ss_pred CHHHHHHHHHHHHcCCc--c-CCHhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcH
Confidence 36668888888876432 2 3445788888888887 54 46888999999999999999 79999999999999
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
.++...+...|++++.+ +.+++++.+|++.+++.+++++ |+|+ |+|++|...+ +.+|.++|++||+++|+|
T Consensus 84 ~~~~~~~~~~G~~~v~v-d~~~~~~~~d~~~l~~~i~~~t--kav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 84 VSTLNMIVLLGATPVMV-DVDRDTLMVTPEAIEAAITPRT--KAII---PVHYAGAPAD---LDAIRAIGERYGIPVIED 154 (379)
T ss_pred HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhcccCC--eEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEE
Confidence 99999999999999999 8888888899999999998765 8887 5667999998 888999999999999999
Q ss_pred ccccccc-cCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC------------------
Q 015768 204 NTYEYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------------------ 264 (400)
Q Consensus 204 ~a~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~------------------ 264 (400)
++++.+. +.+... . ..+.+++.++.+|.+ ++.+.|++++++ +++.++++..+...
T Consensus 155 ~a~a~g~~~~~~~~-g-~~g~~~~Sf~~~K~l--~~g~GG~v~~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 228 (379)
T PRK11658 155 AAHAVGTYYKGRHI-G-ARGTAIFSFHAIKNI--TCAEGGLVVTDD--DELADRLRSLKFHGLGVDAFDRQTQGRAPQAE 228 (379)
T ss_pred CCCccCCeECCeec-C-CCCCEEEeCCCCCcC--cccCceEEEECC--HHHHHHHHHHHHcCCCcchhhhhcccCCCcce
Confidence 9998543 322211 1 122344444455665 456788888776 77877776543211
Q ss_pred ------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----Cc-eEEEeeCCCC--CC
Q 015768 265 ------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GA-IYLWARLPEK--HL 331 (400)
Q Consensus 265 ------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~-~~~~~~~~~~--~~ 331 (400)
++.++ ...|+....+ .+.+++..++.+++.+++.+.|++++...+..+. .. ....+.++.. ..
T Consensus 229 ~~~~G~n~~~~--~l~AAl~~~q--l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (379)
T PRK11658 229 VLTPGYKYNLA--DINAAIALVQ--LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGI 304 (379)
T ss_pred eeccccccCcC--HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccC
Confidence 11122 1222222222 2446777788888888999999987653332221 12 2233444421 23
Q ss_pred CHHHHHHHHHHhcCeEEeCCCcc-C--------------------CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 332 DDFEVVRWLAHRHGVVVIPGGAC-G--------------------CRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 332 ~~~~~~~~l~~~~gi~v~~g~~~-~--------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+.+++.+.|. ++||.+...... . ....+.+-++. +++++++..++.|++++
T Consensus 305 ~r~~~~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 305 SRDALMEALK-ERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CHHHHHHHHH-HCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 5778888875 789876532100 0 02346655555 89999999999998875
No 228
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=7.5e-24 Score=202.26 Aligned_cols=348 Identities=13% Similarity=0.084 Sum_probs=228.9
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+....... ....+...++++.|.+...-..+.++|+++|++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e 117 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSG--VIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIE 117 (433)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc--ccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHH
Confidence 4678899998875 3454 7899999999998763222111 112345566677666655323468999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHH-hcCc-------------EEEEeccCCCCC---CC--------CCHHHHH
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGV-------------THILVGPCSSKT---LH--------PDADWLE 156 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~---~~--------~~~e~l~ 156 (400)
.+++... ....+|+....+|++...... ..+. .+..+ |..... .. .++++++
T Consensus 118 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 196 (433)
T PRK08117 118 GALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQA-PYPYCDRCPKGEDPEVCFLECLRDLE 196 (433)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEe-CCCccccccccCchhHHHHHHHHHHH
Confidence 9999743 223678888888888664332 1110 11222 221100 00 1456677
Q ss_pred Hhhcc---CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccc
Q 015768 157 KTLET---KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSK 232 (400)
Q Consensus 157 ~~l~~---~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK 232 (400)
+.++. ...+.+|+++..+...|.+ .+.++++++.++|++||+++|+||+|.++...+........+....+.+++|
T Consensus 197 ~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK 276 (433)
T PRK08117 197 SLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAK 276 (433)
T ss_pred HHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhh
Confidence 76642 2336778777667777775 5888999999999999999999999998755553322112222233568999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----
Q 015768 233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL---- 308 (400)
Q Consensus 233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 308 (400)
.+| +|+++|+++.+ +++.+.+.......+++.+++.+.++.+.|+..++ ....++++++.+++++.|+++
T Consensus 277 ~lg-~G~pigav~~~---~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~ 350 (433)
T PRK08117 277 GIA-SGLPLSAVVAS---KELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE--EKLLDNANEMGAYALERLEVLKEKH 350 (433)
T ss_pred hcc-CCCcceeEEEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 998 89999999998 78877775555566778899999999999885221 234455566666666666653
Q ss_pred CCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 309 GEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
+.+.-+... +.++.+.+.... .....+...++ ++||.+.+... ..+.+|++++. +|++++++++++|.++
T Consensus 351 ~~~~~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~--~~~~lRl~p~~~~t~~~i~~~~~~l~~~ 426 (433)
T PRK08117 351 PVIGDVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKCL-EKGLLFYLCGN--AGNVLRMIPPLTVTKEEIDEGLDILDEA 426 (433)
T ss_pred CceeeeecC-CcEEEEEEecCCCCcchHHHHHHHHHHH-HCCCEEeecCC--CCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 221112222 556666653210 11334555554 79999876321 25799999765 7999999999999999
Q ss_pred HHHHh
Q 015768 383 LEELV 387 (400)
Q Consensus 383 l~~~~ 387 (400)
++++.
T Consensus 427 l~~~~ 431 (433)
T PRK08117 427 LTEYE 431 (433)
T ss_pred HHHHh
Confidence 98764
No 229
>PRK05968 hypothetical protein; Provisional
Probab=99.94 E-value=6.6e-24 Score=199.19 Aligned_cols=282 Identities=18% Similarity=0.122 Sum_probs=200.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSS 145 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~ 145 (400)
...+++.++++. |.+ ..+++++++.|+..++.++.+|||+|+++.+.|.+.. ..++..|++++++ +.+
T Consensus 65 ~~~le~~lA~l~----g~~--~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-d~~- 136 (389)
T PRK05968 65 VRAFEEMLAKLE----GAE--DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYV-DGR- 136 (389)
T ss_pred HHHHHHHHHHHh----CCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEe-CCC-
Confidence 445555555554 653 3455677789999999999999999999999998754 4556679998888 432
Q ss_pred CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
|++.+++.+ +++ ++|++++|+|+++.+.+ +++|.++|++||+++|+|++|..+.+... ...+.++
T Consensus 137 -----d~~~l~~~i-~~t--klV~ie~pt~~~~~~~d---l~~i~~la~~~gi~vivD~a~a~~~~~~p----~~~g~Di 201 (389)
T PRK05968 137 -----DEEAVAKAL-PGA--KLLYLESPTSWVFELQD---VAALAALAKRHGVVTMIDNSWASPVFQRP----ITLGVDL 201 (389)
T ss_pred -----CHHHHHHhc-ccC--CEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcchhccCc----hhcCCcE
Confidence 788898887 444 89999877777665555 99999999999999999999986553321 2234578
Q ss_pred EEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768 226 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 226 ~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 303 (400)
++.|++|.++.+| .+.|+++.+ +++++++..... .....++++..+.+...|+. +..+.++..+++.++.+
T Consensus 202 vv~S~tK~l~g~~~~~gG~i~~~---~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t----l~~r~~~~~~~a~~la~ 274 (389)
T PRK05968 202 VIHSASKYLGGHSDTVAGVVAGS---KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT----LPLRMKAHEASALEIAR 274 (389)
T ss_pred EEeeccccccCCCCeEEEEEEEC---HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc----HHHHHHHHHHHHHHHHH
Confidence 8999999997544 578988877 677777765432 22345666666666666654 57778888888999999
Q ss_pred HhccCCCCcc-cCC-----------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----------------
Q 015768 304 ALSPLGEGAV-KGG-----------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------------- 355 (400)
Q Consensus 304 ~L~~~~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---------------- 355 (400)
.|++++.+.. ..| ..+.++.+.+... .+..++++.| +..++.+.-|..+.
T Consensus 275 ~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-~~~~~f~~~L-~~~~~~~s~G~~~slv~p~~~~~~~~~~~~ 352 (389)
T PRK05968 275 RLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-IDVRAFADAL-KLFRLGVSWGGHESLVVPAEVVLQQKAQPN 352 (389)
T ss_pred HHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-HHHHHHHHhC-CccEEecCCCCCCceeeeCcccccccCCHH
Confidence 9999887533 223 1133556666532 2466777766 36676665555443
Q ss_pred -------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 356 -------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 356 -------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++.+|+|++. |+.+++++.|++++...
T Consensus 353 ~~~~~gi~~~liR~SvGl---E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 353 SAARFGVSPRSVRLHVGL---EGTEALWADLEQALAAA 387 (389)
T ss_pred HHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHHh
Confidence 14689999997 56667888888888753
No 230
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.94 E-value=3.8e-24 Score=187.95 Aligned_cols=322 Identities=17% Similarity=0.154 Sum_probs=221.2
Q ss_pred CCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768 40 VYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (400)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~ 119 (400)
+-.++.|+++++|.++-..+ ...| |.++..+++.+++++.+|. ..++|++++|+++..++.+.++||+.|++.
T Consensus 8 n~~g~~~~m~eam~~a~~~~-~~~Y----G~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~ 80 (342)
T COG2008 8 NVAGPTPEMREALAAANAVG-DDVY----GEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICH 80 (342)
T ss_pred ccCCCCHHHHHHHHhccccC-CCCC----CCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEe
Confidence 33467899999998876422 2335 4556666777777766674 889999999999999999999999999999
Q ss_pred CCCccchhH--HHHhcC-cEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768 120 APYYFNSYM--SFQMTG-VTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (400)
Q Consensus 120 ~p~~~~~~~--~~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l 192 (400)
.-.|....+ .+...+ ...+.+ ...++ ..+++|+++..+.. +....++++.+.+|..|.++|.++|++|.++
T Consensus 81 ~~aHi~~~E~Ga~~~~~~~~~~~~-~~g~~-Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~ 158 (342)
T COG2008 81 ETAHIYTDECGAPEFFGGGQKLPI-VPGAD-GKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAV 158 (342)
T ss_pred ccccceecccCcHHHHcCCceecc-CCCCC-CCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHH
Confidence 999966663 233333 444433 22234 47899999998872 2223455555566688999999999999999
Q ss_pred HHHcCCEEEEccccccccc--CCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCc--
Q 015768 193 CKAAGSWLVVDNTYEYFMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICA-- 268 (400)
Q Consensus 193 ~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~-- 268 (400)
|++||+.|+.|.+...... .+..........|++..++||..+.+ +|.|+.-+ .++++++..++.......
T Consensus 159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~---~gAiv~gn--~~~~~~a~~~rK~~Ggl~~k 233 (342)
T COG2008 159 CKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAP---VGAIVFGN--RDFAKRARRWRKRAGGLMRK 233 (342)
T ss_pred HHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcce---eeeEEEcC--HHHHHHHHHHHHHhcccHhh
Confidence 9999999999998764332 22222222345678888899987644 47766655 788888877665444433
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 348 (400)
..+.......+|++. -| .....+-...+.+|.+.|++.++.++..|...+.++++++....+......++. ..|+++
T Consensus 234 ~r~laA~~~~~l~~~-~~-~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~~~~~~~-~~~~~~ 310 (342)
T COG2008 234 ARFLAAQGLYALEDD-VW-RLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALRLAGALF-YRGVLI 310 (342)
T ss_pred hhHHHHHHHHHHhcc-HH-HHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHHHHHHHhhchhh-eeeeec
Confidence 334444445555542 12 222333444589999999977666777665589999999864323333333332 455555
Q ss_pred eCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 349 IPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 349 ~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
.++. .-+|+.++. ++++|++++++.+++++
T Consensus 311 ~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 311 GAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred cCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 4422 478999998 89999999998888764
No 231
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.94 E-value=9.1e-24 Score=201.06 Aligned_cols=345 Identities=13% Similarity=0.081 Sum_probs=225.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+.....+. .-..+.+.++++.+.+......+.++|+++|++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e 116 (423)
T PRK05964 39 ADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVE 116 (423)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 4678899998875 4454 6899999999998764321110 112344566777776654323468999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCCC-CCCCHHHHHHhhcc
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKT-LHPDADWLEKTLET 161 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~-~~~~~e~l~~~l~~ 161 (400)
.+++.... +| .+|+....+|++.......... .+..+ |..... ...+++.+++.+..
T Consensus 117 ~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~l~~~l~~ 195 (423)
T PRK05964 117 VALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTA-PFPPDGYEQATLDALEALLEK 195 (423)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEe-CCCcchhHHHHHHHHHHHHHh
Confidence 99997631 23 6899999999987644322111 11222 222110 01127888888863
Q ss_pred -CCCCeEEEEeC-CCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768 162 -KPTPKLVSVVN-PGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 162 -~~~~~~v~l~~-p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 238 (400)
...+.+|+++. .++.+|.. ++.+++++|.++|++||+++|+||++.++...+........+....+.+++|+++.++
T Consensus 196 ~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~ 275 (423)
T PRK05964 196 HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGY 275 (423)
T ss_pred CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCc
Confidence 23356777775 47777865 4899999999999999999999999987754443221111222222347789997333
Q ss_pred ceeEEEEccCCcHHHHHHHHHh------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC---C
Q 015768 239 WRVGYIAYPSEVEGFATQLLKV------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL---G 309 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~ 309 (400)
+++|+++.+ +++.+.+... ....+++.++++..++.+.|+.-++ .+..++..++.+++++.|+++ +
T Consensus 276 ~p~~av~~~---~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~~l~~~~ 350 (423)
T PRK05964 276 LPLAATLCT---AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED--EPVLERVAALSAGLAEGLEPFRDLP 350 (423)
T ss_pred ccceEEEEc---HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHhhccCC
Confidence 899999988 7888777531 2345677899999888888873111 234455555566666666554 2
Q ss_pred CCcccCCCCceEEEeeCCCCCC--CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 310 EGAVKGGEGAIYLWARLPEKHL--DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+.-.... +.++.+.+..... ....+...+. ++||.+.+. .+.+|++++. +|++|++.++++|.++++++
T Consensus 351 ~i~~vrg~-Gl~~~i~l~~~~~~~~~~~l~~~l~-~~Gv~v~~~-----~~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 351 GVADVRVL-GAIGAVELDRPVLERDGPALRAFAL-ERGVLLRPL-----GNTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred CeEEeecc-cEEEEEEeccCcchhHHHHHHHHHH-HCCeEEEec-----CCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 22112233 5666666653210 1456676665 799999863 3589999886 89999999999999999763
No 232
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.94 E-value=1.2e-23 Score=196.55 Aligned_cols=302 Identities=17% Similarity=0.133 Sum_probs=210.9
Q ss_pred HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhH
Q 015768 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYM 128 (400)
Q Consensus 50 ~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~ 128 (400)
+++.+.+.++. |.......++++.+++++ | .+++++++|+|+|+..++.++ .++||+|+++.++|++...
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~----~--~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~ 73 (352)
T cd00616 3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYL----G--VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN 73 (352)
T ss_pred HHHHHHHHcCC---ccCCHHHHHHHHHHHHHh----C--CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH
Confidence 45666666542 333445677888888877 4 357888999999999999998 5899999999999999999
Q ss_pred HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 015768 129 SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208 (400)
Q Consensus 129 ~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~ 208 (400)
.++..|++++.+ +.+++++.+|++.+++.+++++ ++|+++ |++|...+ +++|.++|+++|+++|+|++|+.
T Consensus 74 ~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~---~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 74 AILLLGATPVFV-DIDPDTYNIDPELIEAAITPRT--KAIIPV---HLYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred HHHHcCCeEEEE-ecCCCcCCcCHHHHHHhcCcCC--eEEEEE---CCCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence 999999999999 8876567889999999987655 888876 46899988 88888999999999999999985
Q ss_pred cccCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC---------------CcCccHH
Q 015768 209 FMYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---------------PICASII 271 (400)
Q Consensus 209 ~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~---------------~~~~~~~ 271 (400)
+....... .....++.+.|++ |+++ +.+.|+++.++ +++.++++...... +..++.+
T Consensus 145 g~~~~~~~--~~~~~d~~~~S~~~~K~~~--~~~gg~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (352)
T cd00616 145 GATYKGRK--VGTFGDAGAFSFHPTKNLT--TGEGGAVVTND--EELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEI 218 (352)
T ss_pred CCeECCEE--cccCcceeEEcCCCCCCCc--ccCceEEEECC--HHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHH
Confidence 43211110 1111245667765 9884 33568888775 57777665543211 1122333
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-----CceEEEeeCCCC-CCCHHHHHHHHHHhcC
Q 015768 272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-----GAIYLWARLPEK-HLDDFEVVRWLAHRHG 345 (400)
Q Consensus 272 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~l~~~~g 345 (400)
....+...+ +.+++..++.+++.+++++.|++++++.+..+. ....+.+.++.. ..+..++...|. ++|
T Consensus 219 ~aa~~~~~l----~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~-~~g 293 (352)
T cd00616 219 QAAIGLAQL----EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALK-EAG 293 (352)
T ss_pred HHHHHHHHH----HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHH-HCC
Confidence 333322222 235677778888999999999998765555332 124455556531 236788888775 789
Q ss_pred eEEeCCCccC----------------C-------CCeEEEEecc-CCHHHHHHHHHHHH
Q 015768 346 VVVIPGGACG----------------C-------RGHLRISFGG-LVEDDCKAAADRLR 380 (400)
Q Consensus 346 i~v~~g~~~~----------------~-------~~~iRi~~~~-~~~~~~~~~~~~l~ 380 (400)
|.+....... . .+.+|++++. +|++|++.++++|+
T Consensus 294 I~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 294 IETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 9764322110 0 2589999998 99999999988774
No 233
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.94 E-value=6e-24 Score=197.89 Aligned_cols=283 Identities=16% Similarity=0.106 Sum_probs=201.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS 145 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~ 145 (400)
...+++.++++. | .+++++++|+++|+..++.++.++||+|+++++.|++.... ++..|+++..+ +..
T Consensus 52 ~~~lE~~lA~l~----g--~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~-d~~- 123 (377)
T TIGR01324 52 HFALQDAMCELE----G--GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYY-DPL- 123 (377)
T ss_pred HHHHHHHHHHHh----C--CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEE-CCC-
Confidence 356677777665 4 46899999999999999999999999999999999876643 35678887776 321
Q ss_pred CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
+.+.+++.+++++ |+|++++|+||+|.+.+ +++|+++|+++|+++|+|++|+..... .....+.++
T Consensus 124 -----~~e~l~~~i~~~t--klV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~----~pl~~gaDi 189 (377)
T TIGR01324 124 -----IGEDIATLIQPNT--KVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF----KPLEHGVDI 189 (377)
T ss_pred -----CHHHHHHhcCCCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc----CccccCceE
Confidence 2378888888766 99999999999999888 999999999999999999999854432 234567789
Q ss_pred EEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768 226 NLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 226 ~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (400)
++.|++|++|. ++...|+++.+ ++..+++...........++...+.+...++. +..+++++.+++..+.+.
T Consensus 190 vv~S~tK~l~G~~d~~gG~v~~~---~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~t----l~~R~~~~~~~a~~la~~ 262 (377)
T TIGR01324 190 SIQAGTKYLVGHSDIMIGTVVAN---ARTWDQLREHSYLMGQMVDADDAYTTLRGLRT----LGVRLKQHQESSLAIAKW 262 (377)
T ss_pred EEecCceeccCCCCceEEEEEeC---HHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHH
Confidence 99999999963 34678988887 66666666544444555666666665555553 667788889998899999
Q ss_pred hccCCCC-cccCC----------------CCceEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccC-----------
Q 015768 305 LSPLGEG-AVKGG----------------EGAIYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACG----------- 355 (400)
Q Consensus 305 L~~~~~~-~~~~~----------------~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~----------- 355 (400)
|++++.+ +++.| ..+-.+.+++.. ......++.+.| +-.++.+.-|....
T Consensus 263 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l-~~~~~~~slG~~~sl~~~~~~~~~~ 341 (377)
T TIGR01324 263 LSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHL-QLFGLGYSWGGYESLALCNQPELGH 341 (377)
T ss_pred HHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhC-CcceEeccCCCccceeecCCCCCCH
Confidence 9987653 22222 124455566643 111234555544 34444443333211
Q ss_pred --------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 356 --------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 356 --------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.++.+|||++. |+.+++++.|.+++..
T Consensus 342 ~~~~~~~~~~~liR~svGl---E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 342 RPNIKRNLEGPLIRVHIGL---ENVDDLKADLKAGFEA 376 (377)
T ss_pred HHHHhccCCCCEEEEEeCC---CCHHHHHHHHHHHHhc
Confidence 13579999997 6677888888888864
No 234
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.94 E-value=1.2e-23 Score=200.90 Aligned_cols=343 Identities=15% Similarity=0.098 Sum_probs=223.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+... +.......+.+.++++.+.+..... .+.+++++++++|+
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~ 130 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTH--TCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAV 130 (443)
T ss_pred CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHH
Confidence 4578899998875 4443 789999999999876321 1112223456667777776665322 35899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-C--------c-----EEEEeccC--CCCC---CCC--------CHH
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G--------V-----THILVGPC--SSKT---LHP--------DAD 153 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g--------~-----~~~~~~~~--~~~~---~~~--------~~e 153 (400)
+.+++... ...++|+...++|++........ + . .+..+ |. ..+. ... ..+
T Consensus 131 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (443)
T PRK06058 131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRA-PMSYPYRDPKGLATDGEEAAARAIT 209 (443)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEc-CCCcccccccccccchHHHHHHHHH
Confidence 99999543 23378999999999987443321 1 0 11112 11 1000 000 122
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEecc
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSF 230 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~ 230 (400)
.+++.+..+ .+++|+++..+...|.. .+.+++++|.++|++||+++|.||++.++...+..+..... ..+++ ++
T Consensus 210 ~l~~~~~~~-~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv--~~ 286 (443)
T PRK06058 210 VIEKQVGAD-NLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLI--TT 286 (443)
T ss_pred HHHHhhCCC-ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEE--EE
Confidence 233333322 35777766445555665 57889999999999999999999999987654432211111 12333 45
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC--
Q 015768 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-- 308 (400)
Q Consensus 231 sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 308 (400)
+|.+| +|+++|+++.+ +++.+.+.......+++.+++++.++.+.|+...+ .+..++..++.+++.+.|+++
T Consensus 287 gK~l~-~G~Pi~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~ 360 (443)
T PRK06058 287 AKGIA-GGLPLSAVTGR---AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEE--DDLVARARQIEALMTDRLRALAA 360 (443)
T ss_pred ccccc-CCCccEEEEEc---HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHH--cCHHHHHHHHHHHHHHHHHHHHh
Confidence 79998 89999999998 78887776555667889999999999999975221 234555666666776666653
Q ss_pred --CCCcccCCCCceEEEeeCCCC--CC-C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 309 --GEGAVKGGEGAIYLWARLPEK--HL-D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 309 --~~~~~~~~~~~~~~~~~~~~~--~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
+.+.-+.+. |.++.+.+... .. + ...+...++ ++||.+.++..+ .+++|+.+.. .|++++++++++|
T Consensus 361 ~~~~i~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~-~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~~i~~~~~~l 436 (443)
T PRK06058 361 EDDRIGDVRGR-GAMIAIELVKPGTTEPDAELTKALAAAAH-AAGVIVLTCGTY--GNVIRLLPPLVIGDELLREGLDVL 436 (443)
T ss_pred hCCcEEeeecc-ceEEEEEEecCCCCCCcHHHHHHHHHHHH-HCCeEEeccCCC--CCEEEEECCCccCHHHHHHHHHHH
Confidence 332234455 44444444211 11 1 234555554 799999886543 3789998776 8999999999999
Q ss_pred HHHHHH
Q 015768 380 RRGLEE 385 (400)
Q Consensus 380 ~~~l~~ 385 (400)
.+++++
T Consensus 437 ~~~l~~ 442 (443)
T PRK06058 437 EAALAD 442 (443)
T ss_pred HHHHHh
Confidence 999875
No 235
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=8.3e-24 Score=200.03 Aligned_cols=287 Identities=19% Similarity=0.230 Sum_probs=194.8
Q ss_pred HHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCC
Q 015768 74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLH 149 (400)
Q Consensus 74 ~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~ 149 (400)
.+.+++.++++.| .+..++++|++.|+..++.++.++||+|+++.+.|.+... .++..|++++++ +..
T Consensus 66 ~~~Le~~lA~leg--~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~v-d~~----- 137 (431)
T PRK08248 66 TDVFEKRIAALEG--GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFV-DPS----- 137 (431)
T ss_pred HHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEE-CCC-----
Confidence 3344444444445 4678899999999999999999999999999999977543 456789999988 542
Q ss_pred CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEec
Q 015768 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS 229 (400)
Q Consensus 150 ~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s 229 (400)
|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|+++.... .......+.++++.|
T Consensus 138 -d~e~l~~ai~~~t--klV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~~----~~~pl~~gaDivv~S 207 (431)
T PRK08248 138 -DPENFEAAITDKT--KALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASPY----LLRPIEHGADIVVHS 207 (431)
T ss_pred -CHHHHHHhcCCCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCccc----cCChhHcCCCEEEEc
Confidence 7889999998765 99999999999999999 8899999999999999999987321 112234578899999
Q ss_pred cccccCCCcceeEEEEccCCcHHH-------------------------------HHHHHHhhccCCcCccHHHHHHHHH
Q 015768 230 FSKAYGMMGWRVGYIAYPSEVEGF-------------------------------ATQLLKVQDNIPICASIISQHLALY 278 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~~~~~~~~-------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~ 278 (400)
++|++|.+|.++|+++..+....+ .+.............++...+.+..
T Consensus 208 ~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r 287 (431)
T PRK08248 208 ATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ 287 (431)
T ss_pred CccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc
Confidence 999999888888886654210000 0111112222334556666665555
Q ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHHHHHHHH
Q 015768 279 SLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFEVVRWL 340 (400)
Q Consensus 279 ~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~l 340 (400)
.|++ +..+.+++.+++..+.+.|++++.+. +..| . .|-.+.+.+........++++.|
T Consensus 288 gl~t----l~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l 363 (431)
T PRK08248 288 GLET----LHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSV 363 (431)
T ss_pred CcCc----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhC
Confidence 5554 67888999999999999999887632 2211 1 14455566643211122333332
Q ss_pred HHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 341 AHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 341 ~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+=..+.+.-|... + .++.+|||++. |+.+++++.|.+||+..
T Consensus 364 -~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---Ed~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 364 -KLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT---EAIDDILDDLRQAIRQS 428 (431)
T ss_pred -CcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 1112222222211 0 14579999997 67778888999988764
No 236
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=1e-23 Score=195.73 Aligned_cols=295 Identities=16% Similarity=0.147 Sum_probs=206.5
Q ss_pred CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEE
Q 015768 64 YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHIL 139 (400)
Q Consensus 64 y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~ 139 (400)
|.+.....+.++.+++.++...+ .+..++++++++|+..++.++.++||+|+++.|.|+++.. .++..|+++..
T Consensus 56 y~YsR~gnPt~~~Le~~la~le~--~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~ 133 (395)
T PRK05967 56 YTYGTRGTPTTDALCKAIDALEG--SAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEY 133 (395)
T ss_pred CccCCCCChHHHHHHHHHHHHhC--CCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEE
Confidence 44445566777888888876655 2344666668999999999999999999999999998774 45778999888
Q ss_pred eccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc
Q 015768 140 VGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV 219 (400)
Q Consensus 140 ~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~ 219 (400)
+ +.+ +.+.+++.+++++ |+|++++|+||++.+.+ +++|+++|+++|+++++|++|....+ ..+.
T Consensus 134 v-d~~------~~e~l~~al~~~T--klV~lesPsNP~l~v~d---l~~I~~la~~~g~~vvVD~t~a~p~~----~~pl 197 (395)
T PRK05967 134 Y-DPE------IGAGIAKLMRPNT--KVVHTEAPGSNTFEMQD---IPAIAEAAHRHGAIVMMDNTWATPLY----FRPL 197 (395)
T ss_pred e-CCC------CHHHHHHhcCcCc--eEEEEECCCCCCCcHHH---HHHHHHHHHHhCCEEEEECCccCcee----cChh
Confidence 7 432 3467899888776 99999999999887777 99999999999999999999984332 2344
Q ss_pred CCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768 220 EGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298 (400)
Q Consensus 220 ~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (400)
..+.++++.|.+|.++ .++.-+|+++.+ ++..+++..........+++...+.+...++. +.-+++++.+++
T Consensus 198 ~~GaDivv~S~tKy~~Gh~d~~~G~v~~~---~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~T----l~lR~~~~~~na 270 (395)
T PRK05967 198 DFGVDISIHAATKYPSGHSDILLGTVSAN---EKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT----MGIRLEHHRKSA 270 (395)
T ss_pred HcCCCEEEEecccccCCCCCeeEEEEEcC---HHHHHHHHHHHHHcCCCCCHHHHHHHHcCccc----HHHHHHHHHHHH
Confidence 5678899999999985 245677877766 56666665544444555677776665555554 678888999999
Q ss_pred HHHHHHhccCCCC-cccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCcc----
Q 015768 299 EIIREALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC---- 354 (400)
Q Consensus 299 ~~l~~~L~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~---- 354 (400)
..+.+.|++++.+ ++..|. .+-.+.+.+.....+..+.+.++++.-.+ .+.-|...
T Consensus 271 ~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~ 350 (395)
T PRK05967 271 LEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLAL 350 (395)
T ss_pred HHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeee
Confidence 9999999988764 222221 23445666653200012222223333233 22222211
Q ss_pred ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+ .++.+|||++. |+.+++++.|.+++...
T Consensus 351 ~~~~~~~~~~~~~~~~~liRlSvGl---Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 351 HVKLGDRTVAKAPYAGPVIRLQIGL---EDVPDLKADLERGFAAA 392 (395)
T ss_pred eCCCChhHhhhccCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 0 13579999997 66778888888888754
No 237
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=6.8e-24 Score=196.80 Aligned_cols=283 Identities=18% Similarity=0.207 Sum_probs=199.3
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhc----CcEEEEec
Q 015768 66 ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMT----GVTHILVG 141 (400)
Q Consensus 66 ~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~----g~~~~~~~ 141 (400)
+.+...+++++++++. + .+++++++|+++|+..++. +.++||+|+++.+.|.+....+... +..+.
T Consensus 52 ~~p~~~~le~~lA~le----g--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~--- 121 (364)
T PRK07269 52 KNPTRAKLEETLAAIE----S--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFT--- 121 (364)
T ss_pred CCccHHHHHHHHHHHh----C--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEE---
Confidence 3455677888888876 3 5789999999999999984 6689999999999997766544321 22211
Q ss_pred cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC
Q 015768 142 PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG 221 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~ 221 (400)
+..|++.+++.+++++ |+|++++|+||+|.+.+ +++|+++|+++|+++++|++|...... .....
T Consensus 122 ------~~~d~~~l~~~i~~~T--klV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~----~pl~~ 186 (364)
T PRK07269 122 ------YANTEEELIAAIEEDT--DIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQ----RPIEL 186 (364)
T ss_pred ------ecCCHHHHHHhcCcCc--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----Cchhh
Confidence 1347899999998776 99999999999999998 999999999999999999997643322 12344
Q ss_pred CcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 222 DHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 222 ~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+.++++.|++|.++..| .-.|++++++ +++.+++...+......++++..+.+...|+. +..++++.++++..
T Consensus 187 gaDivv~S~tK~l~g~~d~~gG~v~~~~--~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t----L~~r~~~~~~na~~ 260 (364)
T PRK07269 187 GADIVLHSATKYLSGHNDVLAGVVVTND--LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT----LSLRMERSTANAQE 260 (364)
T ss_pred CCcEEEecCceeccCCCcccceEEEeCc--HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHHH
Confidence 67799999999996333 3468888765 67888877655444556778877777777765 67888889999999
Q ss_pred HHHHhccCCCC-ccc-CCCCceEEEeeCCCCCCCHHHHHHHH---------HHhcCeEEeCCCccC-------------C
Q 015768 301 IREALSPLGEG-AVK-GGEGAIYLWARLPEKHLDDFEVVRWL---------AHRHGVVVIPGGACG-------------C 356 (400)
Q Consensus 301 l~~~L~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~gi~v~~g~~~~-------------~ 356 (400)
+.+.|++++.+ .+. ++.++++. +.+.. .....++...+ ...+.+.+.|+...+ .
T Consensus 261 ~a~~L~~~p~v~~v~ypg~gg~~s-f~~~~-~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~ 338 (364)
T PRK07269 261 VVAFLKKSPAVKEVLYTGKGGMIS-FKVAD-ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLT 338 (364)
T ss_pred HHHHHHhCCCccEEeCCCcCcEEE-EEECC-HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCC
Confidence 99999998763 444 44444443 44431 11122333322 112233444433221 1
Q ss_pred CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 357 RGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 357 ~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
++.+|+|++. |+.+++++.|.++++
T Consensus 339 ~~liRlsvGl---E~~~dli~dl~~al~ 363 (364)
T PRK07269 339 DDLLRLSIGI---EDARDLIADLKQALE 363 (364)
T ss_pred CCeEEEEecc---CCHHHHHHHHHHHhc
Confidence 4689999997 667788888888874
No 238
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=4.1e-23 Score=193.86 Aligned_cols=282 Identities=20% Similarity=0.196 Sum_probs=194.3
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCC
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKT 147 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~ 147 (400)
...+.+.+.+++..|.+ +. +++++|+.++..++. +.++||+|+++.+.|++.. ..++..|++++.+ +.+
T Consensus 54 p~~~~le~~lA~l~g~~-~~-v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~--- 126 (390)
T PRK08064 54 PTREALEDIIAELEGGT-KG-FAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFV-DMT--- 126 (390)
T ss_pred hhHHHHHHHHHHHhCCC-Ce-EEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEE-CCC---
Confidence 33444444454445755 34 455666789988886 7789999999999998654 3456689999988 653
Q ss_pred CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++++|++|..+.... ....+.++++
T Consensus 127 ---d~~~l~~~l~~~t--klV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~----~~~~g~Divv 194 (390)
T PRK08064 127 ---NLEEVAQNIKPNT--KLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQK----PLDLGADVVL 194 (390)
T ss_pred ---CHHHHHHhcCCCc--eEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCcccccC----chhhCCcEEE
Confidence 6889999888766 99999999999999999 8889999999999999999988543221 1234567999
Q ss_pred eccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768 228 FSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306 (400)
Q Consensus 228 ~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 306 (400)
.|++|+++. +|...|+++..+ +++.+++...+.......++...+.+... .+.+..++++..+++..+.+.|+
T Consensus 195 ~S~tK~~~G~~~~laG~~v~~~--~~~~~~l~~~~~~~g~~~~~~~a~l~~~g----l~tl~~R~~~~~~~a~~la~~L~ 268 (390)
T PRK08064 195 HSATKFLAGHSDVLAGLAVVKD--EELAQKLYFLQNSFGAVLGVQDCWLVLRG----LKTLHVRLEHSSETANKIALYLQ 268 (390)
T ss_pred eecceeccCCccceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHcc----cCcHHHHHHHHHHHHHHHHHHHh
Confidence 999999852 345678877664 68888888777644444444444433322 33467888888999999999998
Q ss_pred cCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCcc------------
Q 015768 307 PLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC------------ 354 (400)
Q Consensus 307 ~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~------------ 354 (400)
+++.+. +..| ..+-.+.+.+.. .++.. .+++..++ .++-|...
T Consensus 269 ~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~----~~~~~-~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~ 343 (390)
T PRK08064 269 EHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS----EEAVR-QFVSHVKLPVFAVSLGAVESILSYPAKMSHA 343 (390)
T ss_pred cCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC----HHHHH-HHHHhCCcceEcccCCCCcceeECCcccccc
Confidence 876421 1111 123455556642 23333 34456676 44444211
Q ss_pred ----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 355 ----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 355 ----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+ .++.+|+|++. |+.++.++.|.++++++
T Consensus 344 ~~~~~~~~~~gi~~~liR~SvGl---e~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 344 AMPKEERDERGITDGLLRLSVGL---ENVDDLIADFEQALSYV 383 (390)
T ss_pred cCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhc
Confidence 1 14689999997 56667788888888775
No 239
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.93 E-value=2.3e-23 Score=197.01 Aligned_cols=343 Identities=15% Similarity=0.119 Sum_probs=219.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC---CCcEEE-eCChH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---KSSVMV-TAGAN 99 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~---~~~i~~-~~g~t 99 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.... . ......+.+..+++.+.+....+ .+.++| +++++
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs 109 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGII-H-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGT 109 (412)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccce-e-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCch
Confidence 5678999998875 3444 7899999999988752111 1 11112345556666666542111 134666 48999
Q ss_pred HHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCCC-C-CCCCHHHHHHhhccC
Q 015768 100 QAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSK-T-LHPDADWLEKTLETK 162 (400)
Q Consensus 100 ~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~-~-~~~~~e~l~~~l~~~ 162 (400)
+|++.+++.... ...+|+....+|++....... .|. .++.+ |.++- . ..-+++.+++.+...
T Consensus 110 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 110 NAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRM-PYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred HHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEEC-CCCCccccchhHHHHHHHHHHhc
Confidence 999999998752 336899999999997644322 221 12223 32110 0 001466788877521
Q ss_pred ----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccC
Q 015768 163 ----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYG 235 (400)
Q Consensus 163 ----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g 235 (400)
..+.+|+++..+++.|. .+|.+++++|.++|++||+++|+||++.++...|..+... .-..+ +.+++|++|
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PD--i~~~~K~lg 266 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPD--IVCLSKSIS 266 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCC--EEEechhcc
Confidence 23578887777888898 6799999999999999999999999998664433221111 11222 336789998
Q ss_pred CC-cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhc----cCC
Q 015768 236 MM-GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALS----PLG 309 (400)
Q Consensus 236 ~~-g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~----~~~ 309 (400)
+ |+++|+++.+ +++ +.+.......+++.+++...++.+.++. ..+ .+..++.++..+++++.|+ .++
T Consensus 267 -~~G~pigav~~~---~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~--~~l~~~~~~~g~~l~~~l~~l~~~~~ 339 (412)
T TIGR02407 267 -GYGLPLALTLIK---PEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSD--DAFEKAVQRKSEIIQERLDRIVAEYP 339 (412)
T ss_pred -CCccceeEEEEc---hhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 6 9999999998 454 4443334556778888877766666652 111 1233334444444444443 344
Q ss_pred CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 310 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.........|+++|+.++... ....+...+. ++||.+.+... ..+.+|++++. +++++++.++++|.+++++
T Consensus 340 ~~~~~vrg~Gl~~~l~l~~~~-~~~~~~~~~~-~~Gv~v~~~~~--~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 340 ELIKQVRGRGLMQGIECGDGD-LAGKIAKAAF-ENGLIIETSGP--NDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CceEeeecceeEEEEEecChH-HHHHHHHHHH-HCCCEEeccCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 211222334889999997531 2456666665 79999987432 25789999887 8999999999999999853
No 240
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.93 E-value=1.4e-22 Score=190.07 Aligned_cols=309 Identities=17% Similarity=0.210 Sum_probs=212.3
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~ 123 (400)
.++-++++.+.+..+.. |+ ...+++++++++++.+|. +++++++|+++|+..++.++ .++||+|+++.++|
T Consensus 10 ~~~~~~~~~~~l~~~~~--~g----~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~ 81 (375)
T PRK11706 10 VGTELDYIQQAMSSGKL--CG----DGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTF 81 (375)
T ss_pred CHHHHHHHHHHHHcCCc--cC----CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCc
Confidence 35557778887765422 22 235667777777776675 68999999999999988766 68999999999999
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
.++...++..|++++.+ +.+++++.+|++++++.+++++ ++|+++ |++|...+ +.+|.++|++||+++|+|
T Consensus 82 ~~~~~~~~~~G~~~v~~-d~d~~~~~~d~~~le~~i~~~t--k~i~~~---~~~G~~~~---~~~i~~la~~~~i~vIeD 152 (375)
T PRK11706 82 VSTANAFVLRGAKIVFV-DIRPDTMNIDETLIEAAITPKT--RAIVPV---HYAGVACE---MDTIMALAKKHNLFVVED 152 (375)
T ss_pred HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhcCCCC--eEEEEe---CCCCCccC---HHHHHHHHHHcCCEEEEE
Confidence 99999999999999999 8988888899999999998765 888865 46898888 888999999999999999
Q ss_pred ccccccc-cCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC----------------
Q 015768 204 NTYEYFM-YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---------------- 264 (400)
Q Consensus 204 ~a~~~~~-~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~---------------- 264 (400)
++|+.+. +++.+. ... .++.+.||+ |.++ +|.+.++++.+ +++.+++...+...
T Consensus 153 ~a~a~g~~~~~~~~-g~~--~~~~~~Sf~~~K~l~-~g~gG~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (375)
T PRK11706 153 AAQGVMSTYKGRAL-GTI--GHIGCFSFHETKNYT-AGEGGALLIND---PALIERAEIIREKGTNRSQFFRGQVDKYTW 225 (375)
T ss_pred CccccccccCCeee-ecC--cCEEEEeCCCCcccc-ccCCeEEEECC---HHHHHHHHHHHHcCCCcchhhccCCCccee
Confidence 9999776 333221 111 234455655 9996 57666677655 78887766554311
Q ss_pred -CcCc----cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC---CCccc-CCC----CceEEEeeCCCCCC
Q 015768 265 -PICA----SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG---EGAVK-GGE----GAIYLWARLPEKHL 331 (400)
Q Consensus 265 -~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~-~~~----~~~~~~~~~~~~~~ 331 (400)
..+. +.+....+...+ +.+++..++-+++.+++.+.|++++ .+... .+. ...++++.++.. .
T Consensus 226 ~~~g~~~~~~~~~aa~~~~ql----~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 300 (375)
T PRK11706 226 VDIGSSYLPSELQAAYLWAQL----EAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-E 300 (375)
T ss_pred eecccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-C
Confidence 0112 222222222223 3356666666777788888887764 22211 121 133556666543 3
Q ss_pred CHHHHHHHHHHhcCeEEeCCCcc----------C------------CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 332 DDFEVVRWLAHRHGVVVIPGGAC----------G------------CRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 332 ~~~~~~~~l~~~~gi~v~~g~~~----------~------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+.+++.+.|. ++||.+...... . ....+-+-++. ++++|++..++.|++++
T Consensus 301 ~r~~l~~~L~-~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 301 DRSALINFLK-EAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CHHHHHHHHH-HCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 6788888775 789987532100 0 02345555555 78999999999988764
No 241
>PRK05939 hypothetical protein; Provisional
Probab=99.93 E-value=5e-23 Score=193.06 Aligned_cols=282 Identities=22% Similarity=0.194 Sum_probs=190.3
Q ss_pred HHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCC
Q 015768 74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHP 150 (400)
Q Consensus 74 ~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~ 150 (400)
.+.+++.+++..|. +..+++++++.|+..++.++.++||+|+++.+.|+++. ..++..|++++.+ +..
T Consensus 49 ~~~lE~~la~leg~--~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v-~~~------ 119 (397)
T PRK05939 49 TAALEAKITKMEGG--VGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMV-DAT------ 119 (397)
T ss_pred HHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEE-CCC------
Confidence 33444444444453 34566666789999999999999999999999997654 3566789999888 542
Q ss_pred CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc
Q 015768 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF 230 (400)
Q Consensus 151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~ 230 (400)
|++++++.+++++ ++|++++|+||+|.+.+ +++|+++|+++|+++|+|+++.... .......+.++++.|+
T Consensus 120 d~e~l~~~l~~~t--klV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~----~~~~~~~gaDivv~S~ 190 (397)
T PRK05939 120 DVQNVAAAIRPNT--RMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPW----LFRPKDVGASLVINSL 190 (397)
T ss_pred CHHHHHHhCCCCC--eEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCccccc----ccCccccCCEEEEecC
Confidence 7899999998766 99999999999999988 9999999999999999999986432 1223344688999999
Q ss_pred ccccCCCcceeEEEEccCCcHH------H-------------HHHHHH-hhccCCcCccHHHHHHHHHHhcCCcHHHHHH
Q 015768 231 SKAYGMMGWRVGYIAYPSEVEG------F-------------ATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVTER 290 (400)
Q Consensus 231 sK~~g~~g~~~G~i~~~~~~~~------~-------------~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 290 (400)
||.++..|.++|+++..+...+ + ...+.. ........+++...+.+...++. +..+
T Consensus 191 sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~t----l~~R 266 (397)
T PRK05939 191 SKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAET----LALR 266 (397)
T ss_pred eecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCc----HHHH
Confidence 9999878899898766421100 0 111111 11122334555555555555554 6788
Q ss_pred HHHHHHHHHHHHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeC
Q 015768 291 VKDLVRNREIIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIP 350 (400)
Q Consensus 291 ~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~ 350 (400)
++++.+++..+.+.|++++.+. +..| ..|-++.+.+... .+..+++. .-.+. ..-
T Consensus 267 ~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~-~~~~~f~~----~l~l~~~~~s~ 341 (397)
T PRK05939 267 VDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADG-IDCFDFLN----RLKLVIKATHL 341 (397)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCH-HHHHHHHH----hCCcceEccCC
Confidence 8888889999999999887632 2221 1245566666531 12223333 33332 111
Q ss_pred CCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 351 GGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 351 g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
|... + .++.+|+|++. |+.+++++.|++++.+
T Consensus 342 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl---Ed~~dLi~dl~~Al~~ 396 (397)
T PRK05939 342 GDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI---EDEADLIADFEQALDA 396 (397)
T ss_pred CCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHHhc
Confidence 1111 0 13589999997 6777888888888863
No 242
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.93 E-value=1.3e-22 Score=191.09 Aligned_cols=311 Identities=19% Similarity=0.131 Sum_probs=217.2
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~ 123 (400)
+++.++++.+.+..+. |.......++++++++++ |. ++.++++|+|+|+..++.++ .++||+|+++.++|
T Consensus 9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~----g~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~ 79 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYV----GA--KYAVAFNSATSALHIACLALGVGPGDRVWTTPITF 79 (380)
T ss_pred CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHH----CC--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcch
Confidence 4566788888876643 333455788999999888 43 34566778999999999999 78999999999999
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (400)
.++...++..|++++++ +.+++.+.+|++++++.++ +++ ++|+++ |++|...+ +++|.++|++||++
T Consensus 80 ~~~~~~~~~~G~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~~~t--~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~ 150 (380)
T TIGR03588 80 VATANCALYCGAKVDFV-DIDPDTGNIDEDALEKKLAAAKGKLP--KAIVPV---DFAGKSVD---MQAIAALAKKHGLK 150 (380)
T ss_pred HHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHHhhcccCCCc--eEEEEe---CCCCccCC---HHHHHHHHHHcCCE
Confidence 99999999999999999 8877667889999999997 444 888754 56898888 89999999999999
Q ss_pred EEEcccccccc-cCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC------------
Q 015768 200 LVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI------------ 264 (400)
Q Consensus 200 li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~------------ 264 (400)
+|+|++++.+. +.+.+. ......++.+.|++ |.++. ...|+++..+ +++.++++..+...
T Consensus 151 lI~D~a~a~g~~~~~~~~-g~~~~~d~~~~S~~~~K~~~~--~~GG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~ 225 (380)
T TIGR03588 151 IIEDASHALGAEYGGKPV-GNCRYADATVFSFHPVKIITT--AEGGAVTTND--EELAERMRLLRSHGITKDPLLFEKQD 225 (380)
T ss_pred EEEECCCcccCccCCEeC-CCccccceEEEecCCCCcccc--cCceEEEECC--HHHHHHHHHHHHCCCCCCcccccccc
Confidence 99999998653 332211 11012357777776 88853 2468888776 77777776543211
Q ss_pred -------------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----Cc-eEEEeeC
Q 015768 265 -------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GA-IYLWARL 326 (400)
Q Consensus 265 -------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~-~~~~~~~ 326 (400)
.+.++.+....+...|+ .+++..++-+++.+++.+.|.+++.+....+. .. ....+.+
T Consensus 226 ~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~----~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~ 301 (380)
T TIGR03588 226 EGPWYYEQQELGFNYRMTDIQAALGLSQLK----KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILL 301 (380)
T ss_pred cCcceeeeeccccccCccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEE
Confidence 11123333232333333 25677777788889999999988764433221 11 2233444
Q ss_pred CC-CCCCHHHHHHHHHHhcCeEEeCCCcc-----------C---C-------CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 327 PE-KHLDDFEVVRWLAHRHGVVVIPGGAC-----------G---C-------RGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 327 ~~-~~~~~~~~~~~l~~~~gi~v~~g~~~-----------~---~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+. ...+.+++...| +++||.+.....+ . . ...+++.++. ++++|++..++.|++++
T Consensus 302 ~~~~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 302 DQEFGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCcCCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 32 223678888877 4889988643211 0 0 1568888776 89999999999998764
No 243
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.93 E-value=1.4e-23 Score=189.02 Aligned_cols=342 Identities=17% Similarity=0.162 Sum_probs=218.0
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcC----CCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
+.+.+.++.+.- -+.++.|++++..+... +....|+.. .+.+..|+.+|+++ |.++.+|+||+|+|+++
T Consensus 41 ~~~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI----nAd~~dIiFts~ATEs~ 115 (428)
T KOG1549|consen 41 GTRPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI----NADPSDIVFTSGATESN 115 (428)
T ss_pred CCccEEEecCcC-CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh----CCCCCcEEEeCCchHHH
Confidence 445667766541 24579999998887754 322223322 22455666666666 88888899999999999
Q ss_pred HHHHHHhc-CCCC----EEEEeCCCccchhHH---HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 103 VNIVLTLC-DAGD----SVVMFAPYYFNSYMS---FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 103 ~~~~~~l~-~~gd----~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
+.++.... ..+| +|+..+-.|+++... ++..|++++++ |++.+| .+|++.+++.+++++ +++.|.+.+
T Consensus 116 Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~l-pv~~~~-~~d~~~~~~~i~~~T--~lv~I~~Vn 191 (428)
T KOG1549|consen 116 NLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYL-PVEDSG-LVDISKLREAIRSKT--RLVSIMHVN 191 (428)
T ss_pred HHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEe-ccCccc-cccHHHHHHhcCCCc--eEEEEEecc
Confidence 99999985 3455 899999999887754 46678999999 998665 679999999999987 999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
|.+|+++| +++|.++|+++|+.+++|.+|+ .+..+.....-+.+++..|.||++|++| +|+++.+.+.+.+.
T Consensus 192 n~~gv~~P---v~EI~~icr~~~v~v~~DaAQa---vG~i~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~~~~~~~ 263 (428)
T KOG1549|consen 192 NEIGVLQP---VKEIVKICREEGVQVHVDAAQA---VGKIPVDVQELNADFLSISAHKIYGPPG--IGALYVRRKRPRLR 263 (428)
T ss_pred cCcccccc---HHHHHHHhCcCCcEEEeehhhh---cCCccccHHHcCchheeeecccccCCCc--ceEEEEccCCCccc
Confidence 99999999 9999999999999999999999 3444555555678899999999999887 88888773112211
Q ss_pred HH--H---HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCc---eEEEee
Q 015768 255 TQ--L---LKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGA---IYLWAR 325 (400)
Q Consensus 255 ~~--l---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~---~~~~~~ 325 (400)
.. + ...+.....+.+++.+..+-.+.+.......-....+.+....+...+.. ++.....++... ..+.+.
T Consensus 264 ~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~ 343 (428)
T KOG1549|consen 264 VEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLS 343 (428)
T ss_pred ccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHhhhCchhhccCCcccccccceeee
Confidence 00 0 01111223344555555555554431111222222233344444444332 333222222111 122233
Q ss_pred CCCCCCCHHHHHHHHH---HhcCeEEeC------------CC-ccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 326 LPEKHLDDFEVVRWLA---HRHGVVVIP------------GG-ACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 326 ~~~~~~~~~~~~~~l~---~~~gi~v~~------------g~-~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++. .++..+...+- -.-|..... |. .+....++||+++. ++++|++.+++.+++.+..+.+
T Consensus 344 ~~~--~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~~ 421 (428)
T KOG1549|consen 344 FPY--VEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLRE 421 (428)
T ss_pred ccc--ccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhccc
Confidence 330 01111111110 011111110 00 11135789999999 9999999999999999987765
Q ss_pred c
Q 015768 389 D 389 (400)
Q Consensus 389 ~ 389 (400)
-
T Consensus 422 ~ 422 (428)
T KOG1549|consen 422 M 422 (428)
T ss_pred c
Confidence 3
No 244
>PLN02509 cystathionine beta-lyase
Probab=99.93 E-value=3.1e-23 Score=196.29 Aligned_cols=292 Identities=20% Similarity=0.171 Sum_probs=198.7
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEE
Q 015768 62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTH 137 (400)
Q Consensus 62 ~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~ 137 (400)
..|+.. +. ..++++++++++..+ .++.++++++++++..++ .+.++||+|+++.+.|.++. ..+...|+++
T Consensus 125 ~~Y~r~-gn-pt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v 199 (464)
T PLN02509 125 YDYTRS-GN-PTRDALESLLAKLDK--ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVV 199 (464)
T ss_pred CccCCC-CC-HHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEE
Confidence 346433 44 468888888888776 456777788888986655 57899999999999998876 3345679988
Q ss_pred EEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc
Q 015768 138 ILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC 217 (400)
Q Consensus 138 ~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~ 217 (400)
+.+ +. .|++++++.+.+++ |+|++++|+||+|.+.+ +++|.++|++||+++|+|++++......
T Consensus 200 ~~v-d~------~d~e~l~~ai~~~T--klV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~~~---- 263 (464)
T PLN02509 200 KRV-NT------TNLDEVAAAIGPQT--KLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVLSR---- 263 (464)
T ss_pred EEe-CC------CCHHHHHHhCCcCC--eEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccccccCC----
Confidence 877 43 26889999998766 99999999999999877 9999999999999999999987544321
Q ss_pred ccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768 218 CVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 296 (400)
Q Consensus 218 ~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 296 (400)
....+.++++.|++|+++.+| .-.|+++.++ +.+.+++...+.......++...+.+...|+. +..++++..+
T Consensus 264 pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~--~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~t----L~~R~~r~~~ 337 (464)
T PLN02509 264 PLELGADIVMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT----MALRIEKQQE 337 (464)
T ss_pred hhhcCCcEEEecCcccccCCCccceeEEEecc--HHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhh----HHHHHHHHHH
Confidence 123456799999999996423 3468887654 55555555444333333466665555555544 6788899999
Q ss_pred HHHHHHHHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----
Q 015768 297 NREIIREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----- 354 (400)
Q Consensus 297 ~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----- 354 (400)
++.++.+.|++++.++ +..|. .|-.+.+.+. ......++++.| +=..+.+.-|...
T Consensus 338 nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~-~~~~~~~f~~~l-~l~~~a~slG~~~SLi~~ 415 (464)
T PLN02509 338 NARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHLVETT-KYFSIAVSFGSVKSLISM 415 (464)
T ss_pred HHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC-CHHHHHHHHHcC-CcceEcccCCCCCceeeC
Confidence 9999999999887642 22221 1334444552 111122333322 1122222223211
Q ss_pred -----------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 355 -----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 355 -----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+ .++.||+|++. |+.+++++.|++|+..
T Consensus 416 p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl---E~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 416 PCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFRT 461 (464)
T ss_pred CcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHcc
Confidence 0 13689999997 6777888888888753
No 245
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=3e-23 Score=194.64 Aligned_cols=290 Identities=18% Similarity=0.156 Sum_probs=197.5
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~ 143 (400)
+....+++.++++. |. ...+.+++++.|+..++.+++++||+|+++.++|.+.... +...|+++.++ ..
T Consensus 61 Ptv~~lE~~la~le----g~--~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~v-d~ 133 (432)
T PRK06702 61 PTLAAFEQKLAELE----GG--VGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFF-NP 133 (432)
T ss_pred cHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEE-CC
Confidence 33455556665554 43 4578899999999999999999999999999999877765 67889999888 32
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
.+|++.+++++++++ |+|++++|+||++.+.+ +.+|.++|++||+++|+|+++.... -..+...+.
T Consensus 134 -----~~d~~~l~~~I~~~T--k~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~----~~~pl~~GA 199 (432)
T PRK06702 134 -----NLTADEIVALANDKT--KLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY----LCQAFEHGA 199 (432)
T ss_pred -----CCCHHHHHHhCCcCC--eEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh----hCChhhcCC
Confidence 358899999999877 99999999999999999 9999999999999999999986211 122345677
Q ss_pred EEEEeccccccC-----CCccee-----EEEEccCCcHHHHH----------------------HHHHhhccCCcCccHH
Q 015768 224 VVNLFSFSKAYG-----MMGWRV-----GYIAYPSEVEGFAT----------------------QLLKVQDNIPICASII 271 (400)
Q Consensus 224 ~i~~~s~sK~~g-----~~g~~~-----G~i~~~~~~~~~~~----------------------~l~~~~~~~~~~~~~~ 271 (400)
++++.|++|.++ ++|.++ +|...++ +++.+ ............++++
T Consensus 200 DIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~ 277 (432)
T PRK06702 200 NIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKY--PELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPF 277 (432)
T ss_pred CEEEEccccccCCCcceeceEEEeCCCcccccccc--cccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHH
Confidence 899999999664 334333 3333221 11111 1111222334578888
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCH
Q 015768 272 SQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDD 333 (400)
Q Consensus 272 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~ 333 (400)
..+.+...|+. +..++++..+++..+.+.|++++.+. +..| . .+-.+.+.+.......
T Consensus 278 ~a~l~~rgL~T----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~ 353 (432)
T PRK06702 278 NAYISNIGLET----LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAA 353 (432)
T ss_pred HHHHHHhccCc----HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHH
Confidence 88888888876 57778888899999999999887632 2211 1 2345566665321112
Q ss_pred HHHHHHHHHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 334 FEVVRWLAHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.++++.| +=..+.+.-|..- + .++.+|||++. |+.+++++.|.+++..-.+
T Consensus 354 ~~f~~~l-~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl---Ed~eDLi~Dl~~Al~~~~~ 427 (432)
T PRK06702 354 KEFIANV-KLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI---EDVSDIIADLEAALVGGKQ 427 (432)
T ss_pred HHHHHhC-ccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhcCcc
Confidence 2333322 1112222222110 0 13589999997 6777888999998876433
No 246
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=3.2e-23 Score=195.89 Aligned_cols=288 Identities=22% Similarity=0.208 Sum_probs=192.8
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCC
Q 015768 69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCS 144 (400)
Q Consensus 69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~ 144 (400)
....+++.++++. | .+..++++++++|+..++.++.++||+|+++.+.|.+....+.. .|+++.++ +.
T Consensus 59 t~~~Le~~lA~l~----g--~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~-d~- 130 (425)
T PRK06084 59 TNDVLEQRVAALE----G--GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFA-AH- 130 (425)
T ss_pred hHHHHHHHHHHHh----C--CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEE-CC-
Confidence 3445555555554 5 34567888899999999999999999999999999876655543 46676666 42
Q ss_pred CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV 224 (400)
Q Consensus 145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 224 (400)
.|++.+++.+++++ ++|++++|+||+|.+++ +++|.++|+++|+++|+|++++..... .....+.+
T Consensus 131 -----~d~e~le~ai~~~t--klV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~----~p~~~gaD 196 (425)
T PRK06084 131 -----DDIAALEALIDERT--KAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC----RPFEHGAD 196 (425)
T ss_pred -----CCHHHHHHHhccCC--cEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----ChhhcCCC
Confidence 27899999998765 99999999999999999 899999999999999999999854322 12234677
Q ss_pred EEEeccccccCCCcceeEEEEccC-Cc--HHHHHH-----------------------------HHHhhccCCcCccHHH
Q 015768 225 VNLFSFSKAYGMMGWRVGYIAYPS-EV--EGFATQ-----------------------------LLKVQDNIPICASIIS 272 (400)
Q Consensus 225 i~~~s~sK~~g~~g~~~G~i~~~~-~~--~~~~~~-----------------------------l~~~~~~~~~~~~~~~ 272 (400)
+++.|++|+++.+|.++|.++..+ .. .+..+. ...........+++..
T Consensus 197 ivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~ 276 (425)
T PRK06084 197 IVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFN 276 (425)
T ss_pred EEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHH
Confidence 999999999987777777655532 10 111000 0011222344566666
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHH
Q 015768 273 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDF 334 (400)
Q Consensus 273 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~ 334 (400)
.+.+...|+. +..+.++..+++..+.+.|++++.+. +..| . .+-.+.+.+........
T Consensus 277 a~l~lrgl~t----l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~ 352 (425)
T PRK06084 277 AFLILQGLET----LALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGGQAAGA 352 (425)
T ss_pred HHHHHcCcCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCCHHHHH
Confidence 6665555554 68888899999999999999887632 2221 1 24455566643211122
Q ss_pred HHHHHHHHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+++..| +=..+.+.-|... + .++.+|||++. ||.+++++.|.+||...
T Consensus 353 ~f~~~l-~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl---Ed~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 353 RFIDAL-KLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI---EHIDDIIADLAQALDAS 423 (425)
T ss_pred HHHHhC-CcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 333333 1122222222211 0 13689999997 67778888898888754
No 247
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.93 E-value=2.4e-22 Score=182.40 Aligned_cols=314 Identities=18% Similarity=0.168 Sum_probs=226.1
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~ 123 (400)
..+.++++.+.+.+++... ..-..++++++++|+ | ....+.++++|.|+..++++| .+|||.|+++..+|
T Consensus 14 ~~~e~~~v~~vl~sg~i~~---G~~v~~FE~~~ae~~----G--~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tf 84 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTG---GPFVRRFEQAFAEYL----G--VKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTF 84 (374)
T ss_pred chHHHHHHHHHHHcCCeec---ChHHHHHHHHHHHHh----C--CCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCch
Confidence 4677888999998775443 445788999999988 4 567899999999999999977 49999999999999
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
......+...|++++++ ++|++.+++|++.+++.|++++ |+|+.+ +-.|...+ +++|.++|++||+++|+|
T Consensus 85 vATan~i~~~Ga~PVFv-Did~~T~nid~~~ie~aIt~~t--KAIipV---hl~G~~~d---m~~i~~la~~~~l~vIED 155 (374)
T COG0399 85 VATANAVLLVGAKPVFV-DIDPDTLNIDPDLIEAAITPRT--KAIIPV---HLAGQPCD---MDAIMALAKRHGLPVIED 155 (374)
T ss_pred HHHHHHHHHcCCeEEEE-ecCCcccCCCHHHHHHHcccCC--eEEEEe---hhccCCCC---HHHHHHHHHHcCCeEEEE
Confidence 99999999999999999 9999999999999999999886 999954 56788888 899999999999999999
Q ss_pred ccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----------------CCcC
Q 015768 204 NTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN----------------IPIC 267 (400)
Q Consensus 204 ~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~----------------~~~~ 267 (400)
.+++.++.-..+.....++..++.+-..|.++ .| ..|.++++| +++.++++.++.. .++.
T Consensus 156 aAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~it-tg-EGGav~tnd--~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~r 231 (374)
T COG0399 156 AAQAHGATYKGKKVGSFGDIGAFSFHATKNLT-TG-EGGAVVTND--EELAEKARSLRNHGLSRDAVFKYLHEELGYNYR 231 (374)
T ss_pred cchhccCeecCcccccccceEEEEecCCCCcc-cc-CceEEEeCC--HHHHHHHHHHHHhCcCCCccccceeeecccccC
Confidence 99997664333333333443333333488886 44 679999888 8898888765532 1223
Q ss_pred ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCC---c-eEEEeeCCCCCCCHHHHHHHHHH
Q 015768 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEG---A-IYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~---~-~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
++.+........|+. ++++.++-+++.+.+.+.|++++.+.... +.+ . .+..+.++....+.+.+...| +
T Consensus 232 m~~iqAAigl~QL~~----l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L-~ 306 (374)
T COG0399 232 LTEIQAAIGLAQLER----LDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESL-K 306 (374)
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHH-H
Confidence 444444444444543 56666666777788888888776422221 111 1 223345554334567777766 5
Q ss_pred hcCeE----EeCCCcc--------C-----------CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 343 RHGVV----VIPGGAC--------G-----------CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 343 ~~gi~----v~~g~~~--------~-----------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
+.||. ..|-... . ....+++-+.- ++++++++.++.|++++.+
T Consensus 307 ~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 307 EAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred hCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 77544 4442111 0 12467776555 8999999999999988754
No 248
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.93 E-value=8e-23 Score=194.27 Aligned_cols=348 Identities=12% Similarity=0.098 Sum_probs=222.8
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--C-CcEEE-eCChH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--K-SSVMV-TAGAN 99 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~-~~i~~-~~g~t 99 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+.... . ......+.+.++++.+.+....+ . +.++| +++|+
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGs 113 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGIT-H-GLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGT 113 (425)
T ss_pred CCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccc-c-ccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHH
Confidence 5678899998875 3444 7899999999988752111 1 11112345556666666543111 1 25666 48999
Q ss_pred HHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-C-------c-----EEEEeccCCCC--CCCCCHHHHHHhhccC
Q 015768 100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G-------V-----THILVGPCSSK--TLHPDADWLEKTLETK 162 (400)
Q Consensus 100 ~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g-------~-----~~~~~~~~~~~--~~~~~~e~l~~~l~~~ 162 (400)
+|++.+++... ....+|+....+|++........ | . .++.+ |.+.. .-.-+++.+++.+...
T Consensus 114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~l~~~ 192 (425)
T PRK09264 114 NAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRM-PYDGYFGGDVDTLAYLEKLLEDS 192 (425)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEe-CCCCccccchhHHHHHHHHHHhc
Confidence 99999999875 22368999999998876432211 1 0 22333 32210 0002677888888521
Q ss_pred ----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccC
Q 015768 163 ----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYG 235 (400)
Q Consensus 163 ----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g 235 (400)
..+.+|+++..+...|. +++.+++++|.++|++||+++|+||++.++...|...... .-..+ +.+++|.+|
T Consensus 193 ~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD--i~t~~K~l~ 270 (425)
T PRK09264 193 SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD--IVTLSKSIS 270 (425)
T ss_pred cCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC--EEEeccccC
Confidence 23578888766777786 5789999999999999999999999998765433221111 11222 346789998
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCC
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEG 311 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~ 311 (400)
..|+++|+++.+ +++ ..+.......+++.++++..++.+.++...+ -.+..++++++.+++++.|++ .+..
T Consensus 271 ~~G~pigav~~~---~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~-~~~l~~~~~~~g~~l~~~l~~l~~~~~~~ 345 (425)
T PRK09264 271 GYGLPMALVLIK---PEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS-DDAFEKEVKAKGELVRERLEEIAAKYPGL 345 (425)
T ss_pred CCccceEEEEEc---hhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 449999999998 454 3333333455777888888777677732110 124455566666666665554 3321
Q ss_pred cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.......+.++++.++... ....+...+. ++||.+.+...+ ...||++++. ++++++++++++|.++++++.+
T Consensus 346 ~~~vrg~Gl~~~i~l~~~~-~~~~l~~~~~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 346 GAEVRGRGMMQGIDFGDGE-LAGKIAAEAF-ENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred eecceecccEEEEEecChH-HHHHHHHHHH-HCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1111223778888886421 2456666665 789999875422 4789999775 7999999999999999988754
No 249
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.93 E-value=3.8e-23 Score=196.68 Aligned_cols=342 Identities=16% Similarity=0.117 Sum_probs=218.6
Q ss_pred hcCCCeEEcCCCCC--CC-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVV--YW-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~--~~-~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+.. .+ ..+|.+++++.+.+.+.. ..+... .....+++++.+... ..+.+++++++++|++
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~-~~~~~~----~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e 120 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL-SFGAPT----ELEVELAELVIELVP-SIEMVRMVNSGTEATM 120 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC-cCCCCC----HHHHHHHHHHHHhCC-CCCEEEEecCHHHHHH
Confidence 56789999998863 33 378999999999998742 223233 333455555554432 2578999999999999
Q ss_pred HHHHHhcC--CCCEEEEeCCCccchhHHHHhc-CcEEEEe----cc-----CCCCCC---CCCHHHHHHhhcc-CCCCeE
Q 015768 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMT-GVTHILV----GP-----CSSKTL---HPDADWLEKTLET-KPTPKL 167 (400)
Q Consensus 104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~~~~~~----~~-----~~~~~~---~~~~e~l~~~l~~-~~~~~~ 167 (400)
.+++.... .+++|+...++|++....+... |...... .+ ..+... ..|++.+++.+.. ...+++
T Consensus 121 ~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aa 200 (426)
T PRK00062 121 SAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAA 200 (426)
T ss_pred HHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEE
Confidence 99998653 3578999999999976433221 1100000 00 000000 1278889888853 223577
Q ss_pred EEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEc
Q 015768 168 VSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY 246 (400)
Q Consensus 168 v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~ 246 (400)
|+++.....+|.+.+ .+++++|.++|++||+++|+||+|.++..+. .......+...-+.+++|.++ .|+++|+++.
T Consensus 201 iivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~-~~~~~~~~~~pDi~~~gK~l~-~G~p~ga~~~ 278 (426)
T PRK00062 201 VIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL-GGAQGYYGVTPDLTTLGKIIG-GGLPVGAFGG 278 (426)
T ss_pred EEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC-ccHHHHhCCCcchHhhhhHhh-CCCcceeeeE
Confidence 777755566888765 8899999999999999999999998774332 111111111112468899998 8899999988
Q ss_pred cCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceE
Q 015768 247 PSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIY 321 (400)
Q Consensus 247 ~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 321 (400)
+ +++++.+.. .....+++.+++.+.++.+.|+... +...+..+.....++.|.+.+++++.+....+. |.+
T Consensus 279 ~---~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~-G~~ 354 (426)
T PRK00062 279 R---REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRV-GSM 354 (426)
T ss_pred H---HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEe-cce
Confidence 8 788887752 2233467789999999888887522 233333333333444444444445543223344 444
Q ss_pred EEeeCCCC-C--------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 322 LWARLPEK-H--------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 322 ~~~~~~~~-~--------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+-+.+... . .+ ...+...++ ++||.+.+.. .+.+++++. ++++++++++++|.+++.++
T Consensus 355 ~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 355 FGLFFTDEPVTNYADAKKSDTERFARFFHAML-DEGVYLAPSQ----FEAGFVSAA-HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred EEEEEecCCCcchhhhccccHHHHHHHHHHHH-HCCeEeecCC----cCceeeecc-CCHHHHHHHHHHHHHHHHhh
Confidence 43333211 0 01 245676665 7899998743 345677765 59999999999999999764
No 250
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.93 E-value=3.7e-23 Score=195.98 Aligned_cols=214 Identities=21% Similarity=0.246 Sum_probs=154.7
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCC
Q 015768 69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCS 144 (400)
Q Consensus 69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~ 144 (400)
...++++.++++. |. +..++++++++|+..++.+++++||+|+++.+.|.+... .++..|++++.+ +.+
T Consensus 58 ~~~~le~~lA~l~----g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v-~~~ 130 (418)
T TIGR01326 58 TTDVLEQRIAALE----GG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV-DPD 130 (418)
T ss_pred hHHHHHHHHHHHh----CC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEE-CCC
Confidence 3455555555554 63 568899999999999999999999999999999976543 456789999888 532
Q ss_pred CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV 224 (400)
Q Consensus 145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 224 (400)
|++.+++.+++++ ++|++++|+||+|.+.| +++|.++|+++|+++|+|++|+..... .....+.+
T Consensus 131 ------d~~~l~~~l~~~t--~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~----~~l~~g~D 195 (418)
T TIGR01326 131 ------DPEEFEKAIDENT--KAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLC----RPIDHGAD 195 (418)
T ss_pred ------CHHHHHHhcCcCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcC----CchhcCCe
Confidence 7899999998765 99999999999999999 889999999999999999999743221 12234678
Q ss_pred EEEeccccccCCCcceeEEEEccCCcHHHH--------------------------------HHHHHhhccCCcCccHHH
Q 015768 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFA--------------------------------TQLLKVQDNIPICASIIS 272 (400)
Q Consensus 225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~--------------------------------~~l~~~~~~~~~~~~~~~ 272 (400)
+++.|++|++|.+|.|+|+++.+.. .+. +.............++..
T Consensus 196 ivv~S~sK~l~g~G~~lGg~v~~~~--~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~ 273 (418)
T TIGR01326 196 IVVHSATKYIGGHGTAIGGVIVDGG--KFDWANGRFPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFN 273 (418)
T ss_pred EEEECccccccCCccceEEEEEecc--cccccccccccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHH
Confidence 9999999999988999999887531 110 000011111233344444
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768 273 QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE 310 (400)
Q Consensus 273 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (400)
.+.+...++. +..+.++..++...+.+.|.+++.
T Consensus 274 a~~~~~~l~t----l~~R~~~~~~~a~~la~~L~~~~~ 307 (418)
T TIGR01326 274 AFLLLQGLET----LSLRMERHVENALKVAEFLEAHPK 307 (418)
T ss_pred HHHHHCCccc----HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4443333332 455666777788888888887765
No 251
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.93 E-value=2.4e-22 Score=182.10 Aligned_cols=341 Identities=18% Similarity=0.150 Sum_probs=227.2
Q ss_pred hcCCCeEEcCCCCCC--CC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVVY--WQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~--~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
-+|+.||||..++-+ ++ .+|.|.+++.+.+.++ ..|+.+ .+++-.+|+.+.++.. ..+.+-|++++|+|..
T Consensus 50 vDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G--~~fg~P---te~Ei~~Aell~~~~p-~~e~vrfvnSGTEAtm 123 (432)
T COG0001 50 VDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG--LSFGAP---TELEVELAELLIERVP-SIEKVRFVNSGTEATM 123 (432)
T ss_pred CCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhc--CCCCCC---CHHHHHHHHHHHHhcC-cccEEEEecchhHHHH
Confidence 457889999998844 33 7899999999999985 345543 2344455565555443 2489999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHH-hcCcEEEEec-------cCCCC------CCCCCHHHHHHhhccC-CCCe
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVG-------PCSSK------TLHPDADWLEKTLETK-PTPK 166 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~-------~~~~~------~~~~~~e~l~~~l~~~-~~~~ 166 (400)
.+++..+ ...|+|+.++.||+++.+.+. ..|....... |.+.. .++ |++.++++++.. ..+.
T Consensus 124 sAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-D~~al~~~~~~~g~~IA 202 (432)
T COG0001 124 SAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-DLEALEEAFEEYGDDIA 202 (432)
T ss_pred HHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-CHHHHHHHHHHcCCcEE
Confidence 9999875 345899999999999886553 3331111000 10000 122 899999999854 4478
Q ss_pred EEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CC-CccccCCCcEEEEeccccccCCCcceeE
Q 015768 167 LVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GR-KHCCVEGDHVVNLFSFSKAYGMMGWRVG 242 (400)
Q Consensus 167 ~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G 242 (400)
+|+++......|. ...+++++.|.++|++||+++|.||+...|... |. ......+| +.++.|.+| +|+++|
T Consensus 203 aVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD----lttlGKiIG-GGlP~g 277 (432)
T COG0001 203 AVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD----LTTLGKIIG-GGLPIG 277 (432)
T ss_pred EEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc----hhhhhhhhc-CCccee
Confidence 8888854333455 566778999999999999999999999877653 21 12222233 667899998 999999
Q ss_pred EEEccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768 243 YIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGPE---WVTERVKDLVRNREIIREALSPLGEGAVKGG 316 (400)
Q Consensus 243 ~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 316 (400)
.+.++ .++++.+... ....+++.|+++..|..+.|+...+ ..+++.+.-.++++.+.+.+++.+.......
T Consensus 278 a~gGr---~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~ 354 (432)
T COG0001 278 AFGGR---AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNR 354 (432)
T ss_pred eeccH---HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEee
Confidence 99999 7888876543 3456788899999999998885221 2333333334444444444445554222223
Q ss_pred CCceEEEeeCCCCCC--------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 317 EGAIYLWARLPEKHL--------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 317 ~~~~~~~~~~~~~~~--------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.+++|.+.-.+.... + ..++++.++ ++||++.|+.+ ...=+|..+ +++++++.++++.++++.
T Consensus 355 ~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~----ea~flS~ah-te~di~~~~~a~~~~~~~ 428 (432)
T COG0001 355 VGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQF----EAGFLSTAH-TEEDIDRTLEAADEAFKE 428 (432)
T ss_pred ecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCccc----cceeeeccc-CHHHHHHHHHHHHHHHHH
Confidence 334444333221111 1 234566666 89999998641 234556664 999999999999999988
Q ss_pred Hhc
Q 015768 386 LVK 388 (400)
Q Consensus 386 ~~~ 388 (400)
+.+
T Consensus 429 ~~~ 431 (432)
T COG0001 429 LAG 431 (432)
T ss_pred hhc
Confidence 754
No 252
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.93 E-value=8.6e-23 Score=188.59 Aligned_cols=346 Identities=15% Similarity=0.149 Sum_probs=236.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||.++. ...+ .+|.|++++.+.+..-....+.. ...+...++++.|.+.... ..+.+++++++++|+
T Consensus 53 vdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~--~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~ 130 (447)
T COG0160 53 VDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRD--LYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAV 130 (447)
T ss_pred CCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCc--ccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHH
Confidence 5678999998854 4443 89999999999887633122211 1224455666666655433 357799999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhH-HHHhcC-------------cEEEEeccCCC--CC-C--------CCCHHHH
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYM-SFQMTG-------------VTHILVGPCSS--KT-L--------HPDADWL 155 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~-~~~~~g-------------~~~~~~~~~~~--~~-~--------~~~~e~l 155 (400)
+.+++... .....|+.+..+|++-.. .+...| ..+..+ |.+. .+ + ....+.+
T Consensus 131 E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~-Pyp~~yr~p~~~~~~~~~~~~~~~~ 209 (447)
T COG0160 131 EAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHV-PYPNPYRCPFGIGGEECGDDALEYI 209 (447)
T ss_pred HHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEe-cCCccccCcccCchhhhhHHHHHHH
Confidence 99999874 344789999999877543 222211 123334 3321 11 1 1134556
Q ss_pred HHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc
Q 015768 156 EKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF 230 (400)
Q Consensus 156 ~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~ 230 (400)
+..+. ....+.+++++..+...|. +.|.++++++.++|++||+++|+||++.++...|.-+.....+....+-++
T Consensus 210 e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~ 289 (447)
T COG0160 210 ERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTL 289 (447)
T ss_pred HHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEe
Confidence 66443 2223688888888888887 578889999999999999999999999998887743333333333334477
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC--
Q 015768 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL-- 308 (400)
Q Consensus 231 sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-- 308 (400)
+|.+| .|+++|.++.+ +++.+ ........++..|+++..++.+.|+..++ +...++..+..+++++.|.++
T Consensus 290 aK~ig-~G~Pl~avv~r---~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~--e~L~~~a~~~G~~l~~~L~~l~~ 362 (447)
T COG0160 290 AKSLG-GGLPLSAVVGR---AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEE--ENLLERAAELGEYLRDRLEELQE 362 (447)
T ss_pred ccccc-CCCceeEEecc---HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHh
Confidence 89998 69999999999 78877 54555566799999999999999984222 255666666677777766653
Q ss_pred --CCCcccCCCCceEEEeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHH
Q 015768 309 --GEGAVKGGEGAIYLWARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADR 378 (400)
Q Consensus 309 --~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~ 378 (400)
+.+--++.. |.++-+.+.... ...+++..++. ++|+.+..+.. ..+.+||.+.. .++++++.++++
T Consensus 363 ~~~~IgdVRG~-Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~Glil~~~G~--~~nviRi~PPL~is~e~~d~~l~i 438 (447)
T COG0160 363 KHPLIGDVRGL-GLMIGVELVKDRDTKEPDAELAAKIVARAF-ERGLLLLTCGP--HGNVLRILPPLTISDEELDEGLDI 438 (447)
T ss_pred hcCceeccccc-ceEEEEEEecCCCCCCCCHHHHHHHHHHHH-HcCCEEeccCC--CCcEEEEeCCcccCHHHHHHHHHH
Confidence 332233333 566666654221 12345666665 89998876442 36899999887 899999999999
Q ss_pred HHHHHHHH
Q 015768 379 LRRGLEEL 386 (400)
Q Consensus 379 l~~~l~~~ 386 (400)
|.+++.+.
T Consensus 439 l~~al~~~ 446 (447)
T COG0160 439 LEEALKEA 446 (447)
T ss_pred HHHHHHhh
Confidence 99999864
No 253
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=5.2e-23 Score=192.18 Aligned_cols=213 Identities=22% Similarity=0.229 Sum_probs=156.9
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCC
Q 015768 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTL 148 (400)
Q Consensus 73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~ 148 (400)
..+.+++.+++..|.+ ..+++++++.++..++ .++++||+|+++.|.|.+... .++..|++++.+ +.
T Consensus 51 ~~~~Le~~lA~l~g~~--~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v-~~----- 121 (377)
T PRK07671 51 TRAALEELIAVLEGGH--AGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFV-DT----- 121 (377)
T ss_pred HHHHHHHHHHHHhCCC--ceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEE-CC-----
Confidence 3444444444444653 3455666778887765 577899999999999986554 345579998888 53
Q ss_pred CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
.|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++++|++|....... ....+.++++.
T Consensus 122 -~d~~~l~~ai~~~t--klV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~~----p~~~g~Divv~ 191 (377)
T PRK07671 122 -SNLEEVEEAIRPNT--KAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQS----PISLGADIVLH 191 (377)
T ss_pred -CCHHHHHHhcCCCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccCC----hhhhCCeEEEe
Confidence 27889999998766 99999999999999998 8889999999999999999997543321 12345679999
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
|++|++|.++ .-.|+++.++ +++.+++...+.......++...+.+...++ .+..+++++.++...+.+.|++
T Consensus 192 S~sK~l~G~~~~~~G~~v~~~--~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~----tl~~R~~~~~~na~~la~~L~~ 265 (377)
T PRK07671 192 SATKYLGGHSDVVAGLVVVNS--PELAEDLHFVQNSTGGILGPQDSWLLLRGLK----TLGIRMEEHETNSRAIAEFLNN 265 (377)
T ss_pred cCcccccCCccceeEEEEeCc--HHHHHHHHHHHHhhcCCCCHHHHHHHHcCcC----hHHHHHHHHHHHHHHHHHHHHc
Confidence 9999997332 4567777664 6788888877665455556655555444443 3667888889999999999998
Q ss_pred CCC
Q 015768 308 LGE 310 (400)
Q Consensus 308 ~~~ 310 (400)
.+.
T Consensus 266 ~~~ 268 (377)
T PRK07671 266 HPA 268 (377)
T ss_pred CCC
Confidence 765
No 254
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=1.8e-22 Score=187.16 Aligned_cols=290 Identities=15% Similarity=0.086 Sum_probs=207.3
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP 142 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~ 142 (400)
.......++.+++.++++.| .+..+++++|+.|++.++.++.++||+|+++...|.+....+ +..|+++.++ +
T Consensus 57 sR~~nPt~~~le~~la~LEg--~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~v-d 133 (395)
T PRK08114 57 GRRGTLTHFSLQEAMCELEG--GAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWF-D 133 (395)
T ss_pred cCCCChhHHHHHHHHHHHhC--CCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEE-C
Confidence 33344556666666666655 467888899999999999999999999999999998877554 6689999888 4
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEcccccccccCCCCccccC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCVE 220 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~~ 220 (400)
. .|.+.+++.+++++ |+|++++|+||+|.+.| +++|+++|+++ |+++++|++++.... .....
T Consensus 134 ~------~d~~~l~~~l~~~T--rlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~----~~pl~ 198 (395)
T PRK08114 134 P------LIGADIAKLIQPNT--KVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL----FKALD 198 (395)
T ss_pred C------CCHHHHHHhcCCCc--eEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc----cCHHH
Confidence 2 26788999998776 99999999999999999 99999999998 499999999984322 33445
Q ss_pred CCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 221 GDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 221 ~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
.+.++++.|.+|+++.++ ..+|.++.+ ++..+.+...........++...+.+...|+. +.-+++++.+++.
T Consensus 199 ~GaDivv~S~tKyl~Ghsdv~~G~v~~~---~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~~~~~~na~ 271 (395)
T PRK08114 199 FGIDISIQAGTKYLVGHSDAMIGTAVAN---ARCWEQLRENSYLMGQMVDADTAYMTSRGLRT----LGVRLRQHEESSL 271 (395)
T ss_pred cCCcEEEEcCcccccCCCcceeEEEEcC---HHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc----HHHHHHHHHHHHH
Confidence 678899999999996443 677877766 56666666555444556677777766666665 6788899999999
Q ss_pred HHHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCccC----
Q 015768 300 IIREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGACG---- 355 (400)
Q Consensus 300 ~l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~~---- 355 (400)
.+.+.|++++.+. +..| ..+-.+.+.+.... +.++ +..+++.-.+ .+.-|..-.
T Consensus 272 ~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~-~~~~-~~~f~~~l~l~~~a~SlGg~~SLi~~ 349 (395)
T PRK08114 272 KVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKL-TDEQ-LANYLDNFSLFSMAYSWGGFESLILA 349 (395)
T ss_pred HHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcc-cHHH-HHHHHHhCCcceeecccCCccceecc
Confidence 9999999887632 2222 12445566665310 1222 2223222222 222221110
Q ss_pred -----------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 356 -----------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 356 -----------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++.+|+|++. |+.+++++.|.+|+..+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~liRlSvGl---Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 350 NQPEEIAAIRPAGEVDFTGTLIRLHIGL---EDVDDLIADLAAGFARI 394 (395)
T ss_pred CCchhhhccCChhHhcCCCCeEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 12679999997 67778888888888753
No 255
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.92 E-value=2.4e-22 Score=189.21 Aligned_cols=331 Identities=16% Similarity=0.080 Sum_probs=233.8
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-C-CcEEE--eCChHHHHHHHHHHhcC-------
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-K-SSVMV--TAGANQAFVNIVLTLCD------- 111 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~-~~i~~--~~g~t~a~~~~~~~l~~------- 111 (400)
++.|++.+.+.+.+.++...+. ......++.+.+.+++++.+|.+ + +++.+ |+|+|+|++.++.+...
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~-s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKD-EYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCcc-cCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888988888865433322 23334589999999999999987 4 45655 79999999998876531
Q ss_pred -CC-----CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 112 -AG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 112 -~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
.| .+|+++.-.|+++..+++..|+++..+ |.+++++.+|+++|++.+.+++ .+|+++..+|.+|.+.|
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i-~~d~~~~~vd~~~L~~~i~~~t--~lV~~t~g~t~tG~idp--- 204 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREV-PMDPGRYVIDPEQVVEAVDENT--IGVVCILGTTYTGEYED--- 204 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEE-ecCCCceeeCHHHHHHHHhhCC--eEEEEEeCCCCCcccCC---
Confidence 11 379999999999999999999999999 8887656789999999998776 88999999999999999
Q ss_pred HHHHHHHHHHc------CCEEEEcccccccc----cCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHH-HH
Q 015768 186 LKRISDLCKAA------GSWLVVDNTYEYFM----YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG-FA 254 (400)
Q Consensus 186 l~~i~~l~~~~------~~~li~D~a~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~-~~ 254 (400)
+++|+++|+++ |+++++|.+|+.+. .+..+........+.+..|.||++. .+..+|.++.++ ++ +.
T Consensus 205 i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~-~P~g~G~l~~r~--~~~l~ 281 (431)
T TIGR01788 205 VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGL-VYPGVGWVIWRD--EEALP 281 (431)
T ss_pred HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccC-CCCCcEEEEEeC--hHHcc
Confidence 89999999999 99999999999654 2222222223456678889999872 345578888775 22 22
Q ss_pred HHHHH---hhcc----CCcCccH-----HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-CCceE
Q 015768 255 TQLLK---VQDN----IPICASI-----ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIY 321 (400)
Q Consensus 255 ~~l~~---~~~~----~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~ 321 (400)
..+.. +... .+...+. +..++.... .+.+.+.+..++..++++++.+.|++.+.+++..+ .....
T Consensus 282 ~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~--lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~i 359 (431)
T TIGR01788 282 EELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLR--LGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPL 359 (431)
T ss_pred hhheecccccCCCCCCcceecCchHHHHHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceE
Confidence 22211 1100 0111111 112222122 24456788889999999999999999987676654 33566
Q ss_pred EEeeCCCC---CCCHHHHHHHHHHhcCeEEeCCCc---cCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 322 LWARLPEK---HLDDFEVVRWLAHRHGVVVIPGGA---CGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 322 ~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~---~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
+.+++... ..+..++.+.|. ++|+.+..-.. ..+...+|+++.. .+.+.+++.++.|++++..+
T Consensus 360 V~Fr~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 360 VAFKLKDDADPGYTLYDLSHRLR-ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEEEeCCCCCCCcCHHHHHHHHH-HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 66776531 235667888774 78987532221 1233578999764 78899999999999998764
No 256
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=2.3e-22 Score=191.60 Aligned_cols=352 Identities=16% Similarity=0.140 Sum_probs=226.9
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+..... ......+...++++.|.+...-. .+.++|++++++|+
T Consensus 39 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~ 116 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYT--PAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAN 116 (445)
T ss_pred CCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence 5678899997774 3454 78999999999987643211 11112344556677776554322 25899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHH-hcCc-------------EEEEeccCCCC-C--C-CCC-------HHHH
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGV-------------THILVGPCSSK-T--L-HPD-------ADWL 155 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~-~--~-~~~-------~e~l 155 (400)
+.+++... ....+|+....+|++...... ..+. .++.+ |..+. . + ..+ ++.+
T Consensus 117 e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~ 195 (445)
T PRK08593 117 DGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHI-PFPDKYRGMYEEPDANFVEEYLAPL 195 (445)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEe-CCCccccccccCCcHHHHHHHHHHH
Confidence 99998754 123578899999988764332 2221 12223 22111 0 0 001 2344
Q ss_pred HHhhcc---CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768 156 EKTLET---KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS 231 (400)
Q Consensus 156 ~~~l~~---~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s 231 (400)
++.+.. ...+.+|+++..+...|.+ +|.+++++|.++|++||+++|+||++..+...+........+...-+.+++
T Consensus 196 ~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~g 275 (445)
T PRK08593 196 KEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFG 275 (445)
T ss_pred HHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeec
Confidence 444431 2336888888777777876 789999999999999999999999998775444321111111111244789
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP---- 307 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 307 (400)
|.+| .|+++|+++++ +++.+.+.......+++.+++...++.+.|+.-++ .+..++.+++.+++++.|++
T Consensus 276 K~l~-~G~p~gav~~~---~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~ 349 (445)
T PRK08593 276 KSLA-GGMPMSAIVGR---KEIMESLEAPAHLFTTGANPVSCAAALATIDMIED--ESLLQRSAEKGEYARKRFDQWVSK 349 (445)
T ss_pred cccc-CCcccEEEEEc---HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 9997 78999999998 78888775444456778899998888888875221 23445555555666665554
Q ss_pred CCCCcccCCCCceEEEeeCCCC----CCC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 308 LGEGAVKGGEGAIYLWARLPEK----HLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
++.+.-+... |.+..+.+... ..+ ...+...++ ++||++.+. ..+.+|++++. +|+++++.+++++
T Consensus 350 ~~~v~~vrG~-Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l 423 (445)
T PRK08593 350 YNFVGDVRGY-GLSIGIDIVSDKKLKTRDNEAALKICNYCF-EHGVVIIAV----AGNVLRFQPPLVITYEQLDTALNTI 423 (445)
T ss_pred CCcEEEEecc-ceEEEEEEecCCCcCCCcHHHHHHHHHHHH-HCCeEEecc----CCCEEEEECCCccCHHHHHHHHHHH
Confidence 4433233333 44444444211 001 245666665 799999653 24789999887 8999999999999
Q ss_pred HHHHHHHhccCccc
Q 015768 380 RRGLEELVKDGMVQ 393 (400)
Q Consensus 380 ~~~l~~~~~~~~~~ 393 (400)
.+++.++.....-+
T Consensus 424 ~~~l~~~~~~~~~~ 437 (445)
T PRK08593 424 EQAFTALEAGKLDQ 437 (445)
T ss_pred HHHHHHHhccccCC
Confidence 99999887655444
No 257
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.92 E-value=1.3e-22 Score=189.60 Aligned_cols=279 Identities=18% Similarity=0.161 Sum_probs=187.2
Q ss_pred HHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCC
Q 015768 74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLH 149 (400)
Q Consensus 74 ~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~ 149 (400)
.+.+++.+++..|. +..+++++++.|+..++ .+.+|||+|++++|.|.+... .++..|+++..+ +.
T Consensus 52 ~~~Le~~la~l~g~--~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~v-d~------ 121 (380)
T PRK06176 52 RFALEELIADLEGG--VKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTII-DT------ 121 (380)
T ss_pred HHHHHHHHHHHhCC--CCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEc-CC------
Confidence 44444444444464 33566677788998766 567899999999999976653 446678888877 43
Q ss_pred CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEec
Q 015768 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS 229 (400)
Q Consensus 150 ~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s 229 (400)
.|++++++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+...... ....+.++++.|
T Consensus 122 ~d~e~l~~ai~~~t--~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~~----p~~~gaDivv~S 192 (380)
T PRK06176 122 SDLSQIKKAIKPNT--KALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQN----PLLLGADIVVHS 192 (380)
T ss_pred CCHHHHHHhcCcCc--eEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccCC----ccccCCCEEEec
Confidence 27889999988765 99999999999999999 8899999999999999999998643322 123466799999
Q ss_pred cccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768 230 FSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 308 (400)
Q Consensus 230 ~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (400)
++|+++.++ .-.|+++.++ +++.+++...+.......++...+.+...++ -+..+++++.++..++.+.|++.
T Consensus 193 ~tK~l~g~~d~~gG~vv~~~--~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~----tl~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 193 GTKYLGGHSDVVAGLVTTNN--EALAQEIAFFQNAIGGVLGPQDSWLLQRGIK----TLGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred CceeccCCccceeeEEEecH--HHHHHHHHHHHHHhcCCCCHHHHHHHHhccC----cHHHHHHHHHHHHHHHHHHHHhC
Confidence 999996444 4567787764 6777777766554333345544444443343 25667777778888888888877
Q ss_pred CCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCe---EEeCCCcc--------------
Q 015768 309 GEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGV---VVIPGGAC-------------- 354 (400)
Q Consensus 309 ~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi---~v~~g~~~-------------- 354 (400)
+.+. +..| ..+-.+.+.+.. .++ +.++++.-.+ .+.-|...
T Consensus 267 p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~----~~~-~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~ 341 (380)
T PRK06176 267 PKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN----DSE-AVAFVESLKLFILGESLGGVESLVGIPAFMTHACI 341 (380)
T ss_pred CCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC----HHH-HHHHHHcCCcceEccCCCCCCceeeCCcccccccC
Confidence 6531 1111 124455666642 222 2223332232 22222211
Q ss_pred --------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 355 --------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 355 --------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+ .++.+|+|++. |+.+++++.|++|+++
T Consensus 342 ~~~~~~~~gi~~~liR~svGl---E~~~dli~dl~~Al~~ 378 (380)
T PRK06176 342 PKEQREAAGIRDGLVRLSVGI---EHEQDLLEDLEQAFAK 378 (380)
T ss_pred CHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 0 13589999997 6777888888888864
No 258
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=7.8e-22 Score=188.27 Aligned_cols=363 Identities=15% Similarity=0.091 Sum_probs=236.8
Q ss_pred hhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhh
Q 015768 11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~ 84 (400)
+...+...+.-+.+....+.+.++|-.+++.. ++.+++++...+.+....+ |+...-.+++++...++..+.
T Consensus 15 ~~~~d~~~~~~i~~e~~~q~~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~ 92 (475)
T PLN03226 15 LEEVDPEIADIIEKEKRRQWKGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEA 92 (475)
T ss_pred hhhcCHHHHHHHHHHHHHHHcCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHH
Confidence 44455666667777777778899998887775 4889999988883321222 322233445555444556666
Q ss_pred cCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEEEeCC---CccchhHHH---HhcCc----EEEEeccCCCCCCCCC
Q 015768 85 NKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSVVMFAP---YYFNSYMSF---QMTGV----THILVGPCSSKTLHPD 151 (400)
Q Consensus 85 ~~~~~~~i~~---~~g~t~a~~~~~~~l~~~gd~vlv~~p---~~~~~~~~~---~~~g~----~~~~~~~~~~~~~~~~ 151 (400)
++.+...+.+ .++|+.|+..++.++++|||+|+..+. +|.++.... +..+. +++.+ .++.++..+|
T Consensus 93 f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y-~~~~~~g~iD 171 (475)
T PLN03226 93 FRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPY-RLDESTGLID 171 (475)
T ss_pred hCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeee-eecCCCCCcC
Confidence 7776655544 377889999999999999999998554 333322211 11122 22244 4555566789
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS 231 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s 231 (400)
++++++++.... +++|++. .++ +|+..| +.+|.++|+++|+++++|++|..+..+...........+++++|++
T Consensus 172 ~d~Le~~l~~~~-pklIv~~-~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~h 245 (475)
T PLN03226 172 YDKLEKKAMLFR-PKLIIAG-ASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTH 245 (475)
T ss_pred HHHHHHHHhhcC-CeEEEEe-cCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCc
Confidence 999999987433 5766553 333 788889 7888999999999999999998766543222122235789999999
Q ss_pred cccCCCcceeEEEEccCCcH-----------HHHHHHHHhh-ccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHH
Q 015768 232 KAYGMMGWRVGYIAYPSEVE-----------GFATQLLKVQ-DNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNR 298 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~-----------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 298 (400)
|+++ |.+.|++++++... ++.+.+.... .....+++.....++..+++.-. ..++++.+++.++.
T Consensus 246 K~L~--GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na 323 (475)
T PLN03226 246 KSLR--GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANA 323 (475)
T ss_pred cccc--CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 9993 33448888773110 2222222211 11233455555666666666421 23467789999999
Q ss_pred HHHHHHhccCCCCcccCC-CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEec----c-C
Q 015768 299 EIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFG----G-L 367 (400)
Q Consensus 299 ~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~----~-~ 367 (400)
++|++.|++.+. .+..+ .....+++.+.....+..++...| ++.||.+..+..++ .+..+|++.. + +
T Consensus 324 ~~L~~~L~~~G~-~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L-~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~ 401 (475)
T PLN03226 324 AALANRLMSKGY-KLVTGGTDNHLVLWDLRPLGLTGSRVEKVL-DLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGL 401 (475)
T ss_pred HHHHHHHHhCCC-EEEcCCCCCCEEEEEccCCCCCHHHHHHHH-HHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCC
Confidence 999999998765 44432 235667778754444676676655 58999997664222 3567998433 3 6
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 015768 368 VEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~ 386 (400)
+++|+++..+.|.+++...
T Consensus 402 ~~~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 402 VEKDFEKVAEFLHRAVTIA 420 (475)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999854
No 259
>PRK02769 histidine decarboxylase; Provisional
Probab=99.92 E-value=7.2e-22 Score=183.62 Aligned_cols=315 Identities=11% Similarity=0.051 Sum_probs=220.7
Q ss_pred HHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEEE
Q 015768 46 KMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVVM 118 (400)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i--~~~~g~t~a~~~~~~~l~--~~gd~vlv 118 (400)
...++.+.....++...++.. .....++.+++.+++++.+|.+++++ ++|+|+|+++..++.+.. .++++|++
T Consensus 36 ~~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~ 115 (380)
T PRK02769 36 YSALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYY 115 (380)
T ss_pred HHHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEe
Confidence 455666666655432222222 12456788899999999999876654 899999999887776553 56889999
Q ss_pred eCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
++-.|+++..+++.+|.+...+ |.+++| .+|+++|++.+++. ..+.+|+++.++|++|.+.| +++|.++|+++|
T Consensus 116 s~~~H~Sv~ka~~~lg~~~~~V-~~~~~g-~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g 190 (380)
T PRK02769 116 SKDTHYSVSKIARLLRIKSRVI-TSLPNG-EIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIG 190 (380)
T ss_pred CCCceehHHHHHHHcCCCCcee-ccCCCC-cCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhC
Confidence 9999999999999999888888 777654 68999999999854 22488888899999999999 888899999998
Q ss_pred ---CEEEEcccccccccCC----CCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-------c
Q 015768 198 ---SWLVVDNTYEYFMYDG----RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-------N 263 (400)
Q Consensus 198 ---~~li~D~a~~~~~~~~----~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~-------~ 263 (400)
+++++|.+++.+...- .+.... .+.+.+..|.||+++ .+.++|.++.+ ++..+.+..... .
T Consensus 191 ~~~~~lHVDaA~gg~~~p~~~~~~~~d~~-~~vDsis~s~HK~~~-~P~g~G~l~~r---~~~~~~~~~~~~yl~~~d~t 265 (380)
T PRK02769 191 IDDYYIHADAALSGMILPFVNNPPPFSFA-DGIDSIAISGHKFIG-SPMPCGIVLAK---KKYVERISVDVDYIGSRDQT 265 (380)
T ss_pred CCceEEEEEecccceeecccCccccCCcc-CCCCEEEECCcccCC-CCCCcEEEEEe---hhhhhhcccCccccCCCCCC
Confidence 6999999998754321 112222 256788899999986 45668998888 444444421100 1
Q ss_pred CCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHH
Q 015768 264 IPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
...+.+.....++-.+|+. +.+.+++..++..++++++.+.|++.+...+..|. .+.+.++.+. +++ .
T Consensus 266 ~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~-~~~v~f~~~~-----~~~----~- 334 (380)
T PRK02769 266 ISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPN-SITVVFPCPS-----ERI----W- 334 (380)
T ss_pred ccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCC-ceEEEEcCCC-----HHH----H-
Confidence 1222333333333333432 34667888899999999999999887664444454 6666666552 122 2
Q ss_pred hcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 343 RHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 343 ~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+|..+.+- ++++|+++.. .+.+.+++.++.|.+.+....
T Consensus 335 -~~w~l~~~-----~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~~ 374 (380)
T PRK02769 335 -KKWHLATS-----GNQAHIITMPHHNKQQIDSLIDELIFDLKNPN 374 (380)
T ss_pred -hCeeEccc-----CCEEEEEECCCCCHHHHHHHHHHHHHHHhccc
Confidence 45555542 3588998665 788888999988888777543
No 260
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=5.7e-22 Score=186.31 Aligned_cols=335 Identities=14% Similarity=0.104 Sum_probs=224.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.... + .....+...++++++.+..+ .+.+++++++++|++
T Consensus 33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~-~--~~~~~~~~~~la~~l~~~~~--~~~v~f~~SGseA~e 107 (395)
T PRK03715 33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINP-S--PAFYNEPMAKLAGLLTQHSC--FDKVFFANSGAEANE 107 (395)
T ss_pred CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccc-c--ccccCHHHHHHHHHHhhccC--CCEEEEeCCcHHHHH
Confidence 4678999998864 4444 5899999999988753211 1 12235667788888875532 478999999999999
Q ss_pred HHHHHhc------CCC-CEEEEeCCCccchh-HHHHhcCcEE---EEeccCCCCCC----CCCHHHHHHhhccCCCCeEE
Q 015768 104 NIVLTLC------DAG-DSVVMFAPYYFNSY-MSFQMTGVTH---ILVGPCSSKTL----HPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 104 ~~~~~l~------~~g-d~vlv~~p~~~~~~-~~~~~~g~~~---~~~~~~~~~~~----~~~~e~l~~~l~~~~~~~~v 168 (400)
.+++.+. ++| .+|+..+.+|++.. ..+...|... ... |..+ ++ ..|++.+++.+.++ .++|
T Consensus 108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~-~~~~-~~~~~~~~d~~~l~~~l~~~--~aav 183 (395)
T PRK03715 108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFA-PQVP-GFPKAELNDIASVEKLITDK--TVAV 183 (395)
T ss_pred HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCC-CCCC-CceeeCCchHHHHHHHcCCC--ceEE
Confidence 9999885 123 67888888888865 3333333221 111 1111 11 13788999888654 4888
Q ss_pred EEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEcc
Q 015768 169 SVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 169 ~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~ 247 (400)
+++..++..|... +.+++++|.++|++||+++|+||++.++...|........+...-+.+++|.+| .|+++|.++.+
T Consensus 184 i~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg-~G~p~~av~~~ 262 (395)
T PRK03715 184 MLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIG-GGVPLAALLAK 262 (395)
T ss_pred EEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhh-CCcceEEEEEc
Confidence 8887777888764 789999999999999999999999997644443211111111122457789998 67899999888
Q ss_pred CCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCceEEE
Q 015768 248 SEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAIYLW 323 (400)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~ 323 (400)
+++.. +.......+++.+++...++.+.|+.-++ ++..++.+++.+++++.|+++ + +...... +.++-
T Consensus 263 ---~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~-Glm~~ 334 (395)
T PRK03715 263 ---AEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLA--PGFLEGVRARGEYLKEKLLELSEERG-LEGERGE-GLLRA 334 (395)
T ss_pred ---ccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHhhcCC-cCeEEcc-eeEEE
Confidence 45532 22222345777888888888888875221 345566667777777766643 3 2223333 66666
Q ss_pred eeCCCCCCCHHHHHHHHHHhc---CeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 324 ARLPEKHLDDFEVVRWLAHRH---GVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~---gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
+.+... ....+...+ .+. ||.+.+. .++.+||++.. +|+++++.++++|.+++.++
T Consensus 335 i~l~~~--~~~~~~~~~-~~~~~~Gi~~~~~----~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 335 LLLGKD--IGPQIVEKA-RDMQPDGLLLNAP----RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EEecCc--hHHHHHHHH-HhccCCCEEEeec----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 777532 123444333 345 9998643 24789999888 89999999999999999864
No 261
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.92 E-value=4.6e-22 Score=188.13 Aligned_cols=341 Identities=12% Similarity=0.118 Sum_probs=222.8
Q ss_pred hcCCCeEEcCCC--CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+ ...++ .+|+|.+++.+.+.+..... ..-..+.+..+++.|.+...-..+.++|++++++|++
T Consensus 72 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~---~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e 148 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS---QELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVE 148 (442)
T ss_pred CCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc---cccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence 346889999887 45554 78999999999987643221 1112345566777776554322367999999999999
Q ss_pred HHHHHhcC-----CCCEEEEeCCCccchhHHHHhcCcEEEE---eccCCCCC---CCCCHHHHHHhhcc----CCCCeEE
Q 015768 104 NIVLTLCD-----AGDSVVMFAPYYFNSYMSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLET----KPTPKLV 168 (400)
Q Consensus 104 ~~~~~l~~-----~gd~vlv~~p~~~~~~~~~~~~g~~~~~---~~~~~~~~---~~~~~e~l~~~l~~----~~~~~~v 168 (400)
.+++.... ...+|+....+|++.............. +.|..+.- -..|.+.+++.++. ...+.+|
T Consensus 149 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAav 228 (442)
T TIGR03372 149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAI 228 (442)
T ss_pred HHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEE
Confidence 99997642 2368999999998876444322111000 00111110 01256777776641 2336778
Q ss_pred EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEeccccccCCCc-ceeEEE
Q 015768 169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMG-WRVGYI 244 (400)
Q Consensus 169 ~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~g~~g-~~~G~i 244 (400)
+++..+...|.. .|+++++++.++|++||+++|+||++.++...|..+..... ..+++ +++|.+| .| +++|.+
T Consensus 229 IvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv--t~gK~lg-~G~~Pigav 305 (442)
T TIGR03372 229 ILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDIL--CLAKALG-GGVMPIGAT 305 (442)
T ss_pred EEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCee--eehhhhc-CCcccceEE
Confidence 777667677775 57889999999999999999999999876544432111111 22343 5799997 77 689999
Q ss_pred EccCCcHHHHHHHH--HhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CC-CCcccCCC
Q 015768 245 AYPSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LG-EGAVKGGE 317 (400)
Q Consensus 245 ~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~~~~ 317 (400)
+.+ +++.+.+. ......+++.|+++..++.+.|+.-++ ++..++.++..+++++.|++ ++ .+.-+...
T Consensus 306 v~~---~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~ 380 (442)
T TIGR03372 306 IAT---EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK 380 (442)
T ss_pred Eec---HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecc
Confidence 988 67777663 224456788899999999888875221 22344455555666665554 33 21222333
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
|.++-+.+.... ....+...++ ++||++.+... ..+.+||.+.. +|++++++++++|.+++
T Consensus 381 -Gl~~giel~~~~-~~~~i~~~l~-~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 381 -GLLMAIEFRDNE-IGYAFAKELF-QQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred -eEEEEEEeCChH-HHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 677777775421 2456777776 78999975321 24789999887 89999999999998864
No 262
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.92 E-value=8.7e-22 Score=187.58 Aligned_cols=346 Identities=13% Similarity=0.134 Sum_probs=229.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+..... .....+.+..+++.|.+...-..+.++|++++++|++
T Consensus 79 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve 155 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---QELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155 (459)
T ss_pred CCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHH
Confidence 3477899998874 4454 78999999999988643221 1122445566677776554323468999999999999
Q ss_pred HHHHHhcC----CC-CEEEEeCCCccchhHHHHh-cCcEEEE--eccCCCCCC---CCCHHHHHHhhcc----CCCCeEE
Q 015768 104 NIVLTLCD----AG-DSVVMFAPYYFNSYMSFQM-TGVTHIL--VGPCSSKTL---HPDADWLEKTLET----KPTPKLV 168 (400)
Q Consensus 104 ~~~~~l~~----~g-d~vlv~~p~~~~~~~~~~~-~g~~~~~--~~~~~~~~~---~~~~e~l~~~l~~----~~~~~~v 168 (400)
.+++.... +| ..|+....+|++....... .+-.... +.|..++-. -.|.+++++.+.. ...+.++
T Consensus 156 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAav 235 (459)
T PRK11522 156 AALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAV 235 (459)
T ss_pred HHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEE
Confidence 99997641 23 4789999999997644332 2211000 001111100 1167788887752 2335677
Q ss_pred EEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEeccccccCCCc-ceeEEE
Q 015768 169 SVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSKAYGMMG-WRVGYI 244 (400)
Q Consensus 169 ~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~g~~g-~~~G~i 244 (400)
+++..+...|.+ .|.++++++.++|++||+++|+||++.++...|..+..... ..+++ +++|.+| .| +++|.+
T Consensus 236 IvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv--t~gK~lg-gG~~Pigav 312 (459)
T PRK11522 236 ILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL--CLAKALG-GGVMPIGAT 312 (459)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE--Eechhhh-CCCccceeE
Confidence 777667777875 57889999999999999999999999866443332111111 22333 7799997 67 689999
Q ss_pred EccCCcHHHHHHHH--HhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----C-CCcccCCC
Q 015768 245 AYPSEVEGFATQLL--KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----G-EGAVKGGE 317 (400)
Q Consensus 245 ~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~~~ 317 (400)
+.+ +++.+.+. ......+++.++++..++.+.|+.-++ +...++.+++.++|++.|+++ + .+.-+...
T Consensus 313 ~~~---~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~ 387 (459)
T PRK11522 313 IAT---EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE--QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGK 387 (459)
T ss_pred EEc---HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEec
Confidence 988 67776653 234456788899999998888885322 235566677777777777654 3 11222233
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
|.++.+.+.... ....+...++ ++||.+.+.. ...+.+|+.++. ++++++++++++|.+++.++.+
T Consensus 388 -Gl~~giel~~~~-~~~~i~~~l~-~~Gvl~~~~~--~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 388 -GMLMAIEFVDNE-IGYNFASEMF-RQRVLVAGTL--NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred -eeEEEEEecCch-HHHHHHHHHH-HCCeEEEecC--CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 667777775421 2456777665 7899997542 135789999887 8999999999999999987654
No 263
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.92 E-value=9.8e-22 Score=167.43 Aligned_cols=322 Identities=15% Similarity=0.123 Sum_probs=241.3
Q ss_pred HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccc--h
Q 015768 50 EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN--S 126 (400)
Q Consensus 50 ~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~--~ 126 (400)
.++.+++..+ ..+| ..+....+.+.+.+-++..+... +.-+++..+++.+.++++..++.|||+|++..-+-++ +
T Consensus 30 ~~V~~A~~~~-~lgh-~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra 107 (385)
T KOG2862|consen 30 GRVQEAMSRP-SLGH-MSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRA 107 (385)
T ss_pred HHHHHhhcCC-cccc-CCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHH
Confidence 3444455554 3334 34456677777777777666544 3446666779999999999999999999988777666 4
Q ss_pred hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccc
Q 015768 127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY 206 (400)
Q Consensus 127 ~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~ 206 (400)
.+..++.|+++..+ +.+ .|...++|.+++.++.++ ++++++++....||+..+. +..+.++|++|+.++++|.+.
T Consensus 108 ~D~~~r~ga~V~~v-~~~-~G~~~~le~i~~~lsqh~-p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~lllVD~Va 182 (385)
T KOG2862|consen 108 ADCARRYGAEVDVV-EAD-IGQAVPLEEITEKLSQHK-PKAVFVTHGDSSTGVLQDL--LAISGELCHKHEALLLVDTVA 182 (385)
T ss_pred HHHHHhhCceeeEE-ecC-cccCccHHHHHHHHHhcC-CceEEEEecCccccccchH--HHHHHHHhhcCCeEEEEechh
Confidence 47889999999988 654 556789999999998765 8999999999999999884 555667899999999999998
Q ss_pred cccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc-----------------------c
Q 015768 207 EYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-----------------------N 263 (400)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~-----------------------~ 263 (400)
+ .++.++..+.++.++......|++|.| ...+.+..+ +...++++..+. .
T Consensus 183 S---lggt~F~mDewgVDvaytgSQKaL~aP-~GLsiisfS---~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~ 255 (385)
T KOG2862|consen 183 S---LGGTEFEMDEWGVDVAYTGSQKALGAP-AGLSIISFS---DKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRA 255 (385)
T ss_pred h---cCCccceehhhcccEEEecchhhcCCC-CCcceeecC---HHHHHHHhhccCCceEEEEeHHhhcchhccCCcccc
Confidence 8 557788888888899888889999843 334557766 455555543221 1
Q ss_pred CCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCC-cccCCC--CceEEEeeCCCCCCCHHHHHHH
Q 015768 264 IPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEG-AVKGGE--GAIYLWARLPEKHLDDFEVVRW 339 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 339 (400)
..++++.-..+.+.++|.. .++.+++..++++++.+.++..|+++|.- .+..+. ..-...+.+|... |..+++.+
T Consensus 256 yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gv-Dw~dVv~~ 334 (385)
T KOG2862|consen 256 YHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGV-DWKDVVAY 334 (385)
T ss_pred cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCC-CHHHHHHH
Confidence 2356777777777777774 34668899999999999999999998772 222211 1223446666654 89999999
Q ss_pred HHHhcCeEEeCCCccCCCCeEEEE-ecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 340 LAHRHGVVVIPGGACGCRGHLRIS-FGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 340 l~~~~gi~v~~g~~~~~~~~iRi~-~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
+..++++.+..|-....+..+||+ +++ -+.+.++..++.|+.++++.
T Consensus 335 ~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 335 AMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred HHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 998888888877766678899998 444 67889999999999988763
No 264
>PRK07482 hypothetical protein; Provisional
Probab=99.92 E-value=1.3e-21 Score=187.00 Aligned_cols=346 Identities=13% Similarity=0.035 Sum_probs=224.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSI-SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+... ..+ .....+.+.++++.|.+......+.++|+++|++|+
T Consensus 47 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAv 124 (461)
T PRK07482 47 AQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTY--VGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDAN 124 (461)
T ss_pred CCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccc--cccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHH
Confidence 5678999998876 3443 689999999999886421 111 111234556677777655432347899999999999
Q ss_pred HHHHHHhc------C-C-CCEEEEeCCCccchhHHHHh-cC-------c-----EEEEeccCCC--C----CC------C
Q 015768 103 VNIVLTLC------D-A-GDSVVMFAPYYFNSYMSFQM-TG-------V-----THILVGPCSS--K----TL------H 149 (400)
Q Consensus 103 ~~~~~~l~------~-~-gd~vlv~~p~~~~~~~~~~~-~g-------~-----~~~~~~~~~~--~----~~------~ 149 (400)
+.+++... . + ..+|+....+|++....... .| . .+..+ +.+. . +. .
T Consensus 125 e~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~ 203 (461)
T PRK07482 125 ETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHT-EAPHYYRRADAGMSEEQFSA 203 (461)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEc-CCCccccccccCCCHHHHHH
Confidence 99999874 1 2 36799999999886532211 11 0 11111 1111 0 00 0
Q ss_pred CCHHHHHHhhc-c-CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcE
Q 015768 150 PDADWLEKTLE-T-KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHV 224 (400)
Q Consensus 150 ~~~e~l~~~l~-~-~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~ 224 (400)
.+++.+++.+. . ...+.+|+++..+...|.+ ++.+++++|.++|++||+++|.||++.+|...+..+..... ..|
T Consensus 204 ~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PD 283 (461)
T PRK07482 204 YCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPD 283 (461)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCC
Confidence 03567777774 2 2336888888666666776 67889999999999999999999999988554432221111 223
Q ss_pred EEEeccccccCCCcc-eeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768 225 VNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 296 (400)
Q Consensus 225 i~~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 296 (400)
++ +++|.++ .|. ++|.++.+ +++.+.+.. .....+++.|+++..++.+.|+..++ +...++.++
T Consensus 284 iv--~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~--~~l~~~~~~ 355 (461)
T PRK07482 284 LI--TVAKGLT-SAYAPLSGSIVG---EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER--ENLVGNAAE 355 (461)
T ss_pred EE--EEccccc-cCccccceeeec---HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHH
Confidence 33 4589997 674 89999888 677776652 12456888999999999998875221 223344445
Q ss_pred HHHHHHHHhc----cCCCCcccCCCCceEEEeeCCCCC-----CC-----HHHHHHHHHHhcCeEEeCCCccCCCCeEEE
Q 015768 297 NREIIREALS----PLGEGAVKGGEGAIYLWARLPEKH-----LD-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRI 362 (400)
Q Consensus 297 ~~~~l~~~L~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi 362 (400)
..+++.+.|+ +++.+..+... |.++-+.+.... .+ ...+...++ ++||++.++. ..+.+|+
T Consensus 356 ~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~~---~~~~i~~ 430 (461)
T PRK07482 356 VGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL-ERGVIARAMP---HGDILGF 430 (461)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH-HCCcEEecCC---CCCEEEE
Confidence 5555555544 45543334444 566666653211 01 235666665 7999986532 2478999
Q ss_pred Eecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 363 SFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 363 ~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.++. +|++|+++++++|.++++++.+
T Consensus 431 ~Ppl~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 431 APPLVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8776 8999999999999999988643
No 265
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=6.6e-22 Score=187.04 Aligned_cols=290 Identities=20% Similarity=0.200 Sum_probs=192.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSS 145 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~ 145 (400)
...+++.++++. |.+ ..++|+++|+|++.++.++.++||+|+++...|.+....+ +..|++++++ +.+
T Consensus 66 ~~~le~~lA~l~----g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d~~- 137 (433)
T PRK08134 66 VAVLEERVAALE----GGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFV-KPG- 137 (433)
T ss_pred HHHHHHHHHHHh----CCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEE-CCC-
Confidence 445555555554 643 4788999999999999999999999999999998765544 5589999988 543
Q ss_pred CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
|++.+++.+++++ |+|++++++||+|.+.| +++|.++|+++|+++|+|+++...... .....+.++
T Consensus 138 -----d~~~l~~~i~~~T--klV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~~----~pl~~GaD~ 203 (433)
T PRK08134 138 -----DIDGWRAAIRPNT--RLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYLL----RPFEHGADL 203 (433)
T ss_pred -----CHHHHHHhcCCCC--eEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----CchhcCCCE
Confidence 7899999998877 99999999999999999 999999999999999999998744331 123457789
Q ss_pred EEeccccccCCCcceeEEEEccC-Cc------------------------H-----HHHHHHH-HhhccCCcCccHHHHH
Q 015768 226 NLFSFSKAYGMMGWRVGYIAYPS-EV------------------------E-----GFATQLL-KVQDNIPICASIISQH 274 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~G~i~~~~-~~------------------------~-----~~~~~l~-~~~~~~~~~~~~~~~~ 274 (400)
++.|.+|++|.+|-.+|.++... .. + .+..+.. ..........++...+
T Consensus 204 vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~ 283 (433)
T PRK08134 204 VYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAW 283 (433)
T ss_pred EEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 99999999986665555543321 00 0 0000000 0111223345555555
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC-----------------CCceEEEeeCCCCCCCHHHH
Q 015768 275 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG-----------------EGAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 275 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~ 336 (400)
.+...|+. +..+.++..+++..+.+.|++++.+. +..| ..+-.+.+.+........++
T Consensus 284 l~~~gL~t----l~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f 359 (433)
T PRK08134 284 QLLQGIET----LPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKF 359 (433)
T ss_pred HHhcCCCc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHH
Confidence 55545544 67888889999999999999877532 1111 12345556664311112233
Q ss_pred HHHHHHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 337 VRWLAHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
++.| +=..+.+.-|... + .++.+|||++. |+.+++++.|.+|++...+.
T Consensus 360 ~~~l-~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dli~dl~~Al~~~~~~ 431 (433)
T PRK08134 360 IESL-KLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL---EDADDLIDDLKRALKAAEKA 431 (433)
T ss_pred HHhC-CcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhhhc
Confidence 3322 1111122222211 0 13579999997 67778899999999876554
No 266
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=2.5e-21 Score=171.15 Aligned_cols=362 Identities=19% Similarity=0.159 Sum_probs=263.5
Q ss_pred hhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 11 ALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
+...+...+..+.+....+++.|+|-.++|.. ++.|+++....+.+.. -.-|+...-.+.++....++.+++
T Consensus 7 l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~--S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 7 LADYDPEIFEAIQQELERQREHIELIASENFT--SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred HHhcCHHHHHHHHHHHHHHhhceeeeeccccC--CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 33455677788888888888999998887765 5899999988886522 234556667788888888999999
Q ss_pred cCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH---HhcC--cEEEEeccCCCCCCCCCHHHHHHhh
Q 015768 85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---QMTG--VTHILVGPCSSKTLHPDADWLEKTL 159 (400)
Q Consensus 85 ~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~---~~~g--~~~~~~~~~~~~~~~~~~e~l~~~l 159 (400)
+|.+.-++.-.+|+ .|+..++.+|.+|||+|+-.+-.+.++...- ...| ++.+.+ +++++...+|.|.+++..
T Consensus 85 Fga~~anVQPhSGs-~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y-~vd~et~~IDyD~~~k~a 162 (413)
T COG0112 85 FGAEYANVQPHSGS-QANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSY-GVDPETGLIDYDEVEKLA 162 (413)
T ss_pred hCCCccccCCCCch-HHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEec-ccccccCccCHHHHHHHH
Confidence 99887777777765 9999999999999999998887776665332 2223 477888 899887789999999988
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcc
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 239 (400)
.+.+ ||+|+.-... .-..+| ++++.++|++.|.++++|.+|..+...+..+...-+-.+++++|.||.+ +|.
T Consensus 163 ~e~k-PK~ii~G~Sa--Y~r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTl--rGP 234 (413)
T COG0112 163 KEVK-PKLIIAGGSA--YSRPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTL--RGP 234 (413)
T ss_pred HHhC-CCEEEECccc--cccccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCC--CCC
Confidence 8654 7988865332 336678 7888888889999999999997555443333333334789999999998 688
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCcCccHH-HHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASII-SQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE 317 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 317 (400)
|.|.|.+++ +++.+++.+.-.....+.+-. ...+.+.++.+ .+..++++.++..+|++.|.+.|.+.|.-.+.+.+
T Consensus 235 rGG~Il~~~--eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgT 312 (413)
T COG0112 235 RGGIILTND--EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGT 312 (413)
T ss_pred CceEEEecc--HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCc
Confidence 999999996 689999987554333333322 22222233333 22446899999999999999999998874455555
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC-ccC-----CCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHH
Q 015768 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG-ACG-----CRGHLRISFGG-----LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~-~~~-----~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~ 386 (400)
....+.+++.....++.+... ++.+.||.+.--. ++. .+..|||+... +.++|+++..+.+.+++...
T Consensus 313 dnHl~lVDl~~~~~~Gk~ae~-~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 313 DNHLVLVDLRSKGLTGKKAEA-ALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred cceEEEEEcccCCCCHHHHHH-HHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhcc
Confidence 567777787744446666555 4568999985332 222 25789998553 56788888888888888764
Q ss_pred h
Q 015768 387 V 387 (400)
Q Consensus 387 ~ 387 (400)
.
T Consensus 392 ~ 392 (413)
T COG0112 392 K 392 (413)
T ss_pred c
Confidence 3
No 267
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.91 E-value=4.3e-22 Score=184.42 Aligned_cols=288 Identities=23% Similarity=0.208 Sum_probs=200.7
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEecc
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGP 142 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~ 142 (400)
...-....+.+.+.++++.| .+..+++++|+.|+..++.+++++||+|++....|.+....++ ..|+++.++ +
T Consensus 50 ~R~gnPt~~~le~~la~Le~--g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~-d 126 (386)
T PF01053_consen 50 SRYGNPTVRALEQRLAALEG--GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFV-D 126 (386)
T ss_dssp TTTC-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEE-S
T ss_pred eccccccHHHHHHHHHHhhc--ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEe-C
Confidence 33345666777777777766 3778999999999999999999999999999999988876654 468998887 3
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEcccccccccCCCCccccCC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTYEYFMYDGRKHCCVEG 221 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~-~~li~D~a~~~~~~~~~~~~~~~~ 221 (400)
. -|++++++.+++++ ++|+++.|+||+..+.| +.+|+++|+++| +++++|++++.... ..+...
T Consensus 127 ~------~d~~~l~~~l~~~t--~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~----~~pL~~ 191 (386)
T PF01053_consen 127 P------TDLEALEAALRPNT--KLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN----QNPLEL 191 (386)
T ss_dssp T------TSHHHHHHHHCTTE--EEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-GGGG
T ss_pred c------hhHHHHHhhccccc--eEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee----eccCcC
Confidence 2 27899999999876 99999999999999999 999999999998 99999999875422 223445
Q ss_pred CcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 222 DHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 222 ~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+.++++.|++|.++. ...-.|.++.++. +++.++++.........+++...+.+...++. +.-+++++.+++..
T Consensus 192 GaDivv~S~TKyl~Ghsdv~~G~vv~~~~-~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T----l~~R~~~~~~nA~~ 266 (386)
T PF01053_consen 192 GADIVVHSATKYLSGHSDVMGGAVVVNGS-SELYDRLREFRRLLGATLSPFDAWLLLRGLRT----LPLRMERQNENAEA 266 (386)
T ss_dssp T-SEEEEETTTTTTTSSSE-EEEEEESSH-HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT----HHHHHHHHHHHHHH
T ss_pred CceEEEeeccccccCCcceeeEEEEECch-hhhhhhhcchhhhcCccchHHHHHHHhcCCCc----HHHHHHHHHHHHHH
Confidence 678999999999953 3344677776531 46777777766655667778888877777776 67888999999999
Q ss_pred HHHHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeE---EeCCCcc------
Q 015768 301 IREALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVV---VIPGGAC------ 354 (400)
Q Consensus 301 l~~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~------ 354 (400)
+.+.|++++.+. +..| ..+-.+.+.+... .+.+..+.+.-.++ +.-|...
T Consensus 267 lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~----~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p 342 (386)
T PF01053_consen 267 LAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG----EEAARRFLDALKLFSIAPSLGGVESLISHP 342 (386)
T ss_dssp HHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH----HHHHHHHHHH-SSSEESSS-SSSS-EEEET
T ss_pred HHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc----hhhhHhHHhhhhhHhhhhhcCCcccccccc
Confidence 999999987632 3222 1233666777642 22233333333433 1122211
Q ss_pred ----------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 355 ----------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 355 ----------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+ .++.+|+|++. |+.+++++.|++|++
T Consensus 343 ~~~~h~~~~~e~~~~~Gi~~~liRlSvGl---Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 343 ASTSHRSLSPEERAEAGISDGLIRLSVGL---EDPDDLIADLEQALE 386 (386)
T ss_dssp TCTTTTTSCHHHHHHTTS-TTEEEEE--S---S-HHHHHHHHHHHHH
T ss_pred cchhhccCChhhhhccCCCCCeeEEEecc---CCHHHHHHHHHHhcC
Confidence 0 13679999997 778888888888875
No 268
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.91 E-value=8.3e-22 Score=181.99 Aligned_cols=315 Identities=13% Similarity=0.102 Sum_probs=222.9
Q ss_pred CCcHHHHHHHHHhhcC---CCCCCCCCCCCcH---HHHHHHHHHHHhhcCCC-CCcEEEeCC-hHHHHHHHHHHhcCCCC
Q 015768 43 QPPKMAMEKVKELVWD---PSISKYGADEGLP---ELRDALVKKLNQENKLY-KSSVMVTAG-ANQAFVNIVLTLCDAGD 114 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~---~~~~~y~~~~g~~---~~~~~~a~~l~~~~~~~-~~~i~~~~g-~t~a~~~~~~~l~~~gd 114 (400)
..|.+|++++.+.+.+ ...+.+....-.+ ++.+.+.+.+++.++.+ ..++++++| +|.|++.++..+..+||
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 3578999999999884 2233443333334 67777777788888874 457888866 99999999999999999
Q ss_pred EEEEeCCCccch--hHHHHhcCcEEEEeccCCC---CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 115 SVVMFAPYYFNS--YMSFQMTGVTHILVGPCSS---KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 115 ~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~---~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
++++...+.++. .+.++..|. +..+ ..++ ++-.++++.++ +++ .+++|.+++..+.||+..+
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~-~~~~~~~~~~~~~~~~~~--~~~--~~~~v~~th~ETstGv~~~------- 148 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVV-ASGKEGNYTKIPDPSTWE--ISE--DAAYVHYCANETIHGVEFR------- 148 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEE-eccccCCCCCCCCHHhcC--CCC--CCCEEEEcCCCCcccEecc-------
Confidence 998888887664 477888898 6666 4332 33344555544 223 4699999999999999876
Q ss_pred HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh---------
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV--------- 260 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~--------- 260 (400)
++++.+++++++|.+++. ++.+......+ ++++|.+|++|.+| +|.++.+ ++..+++...
T Consensus 149 -~l~~~~~~l~iVDavss~---g~~~id~~~~d--~~~~ssqK~lgP~G--lg~l~~s---~~~~~~~~~~~~~~~~~~~ 217 (349)
T TIGR01364 149 -ELPDVKNAPLVADMSSNI---LSRPIDVSKFG--LIYAGAQKNIGPAG--LTVVIVR---KDLLGRASRITPSMLNYKI 217 (349)
T ss_pred -eecccCCCeEEEEccccc---cCccCCHHHcc--EEEEecccccCCCc--eEEEEEC---HHHHhhcccCCCCcchHHH
Confidence 455568999999999984 33344333333 88999999998555 6888888 5665544221
Q ss_pred -h--ccCCcCccHHHHHHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHHhccCCCCccc--CC--CCceEEEeeCCCCCC
Q 015768 261 -Q--DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVK--GG--EGAIYLWARLPEKHL 331 (400)
Q Consensus 261 -~--~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~--~~~~~~~~~~~~~~~ 331 (400)
. ....+++|....+++..+|+... + .++++.++++++.+++++.|++++++... .+ .+...+.+.++...
T Consensus 218 ~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~- 296 (349)
T TIGR01364 218 HAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEE- 296 (349)
T ss_pred HHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChh-
Confidence 1 22345788888888888887532 2 37889999999999999999999643222 11 22345666666432
Q ss_pred CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 332 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
...++...+ .++|+++.+|.. ..+.+|+|+.. ++.+|++.+++.|++++++
T Consensus 297 ~~~~~~~~~-~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 297 LEKRFLKEA-EERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred HhHHHHHHH-HHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 124555545 479997777653 34689999887 8999999999999987654
No 269
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.91 E-value=4.3e-22 Score=202.59 Aligned_cols=358 Identities=15% Similarity=0.058 Sum_probs=226.5
Q ss_pred HHHHH-HHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC---CCCCCCCcHHHHHHHHHHHHhhcCCCCC--cE
Q 015768 19 MVQIQ-ELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS---KYGADEGLPELRDALVKKLNQENKLYKS--SV 92 (400)
Q Consensus 19 ~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~~~~~~a~~l~~~~~~~~~--~i 92 (400)
...++ ..|..-.+++.|+.+.....++..|.+++.....+...+ .|..........+...+.+++.+|++++ .|
T Consensus 21 ~~~~R~~~fp~l~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~V 100 (805)
T PLN02724 21 IDELRATEFARLKGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYAC 100 (805)
T ss_pred HHHHHHHHhhhcCCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEE
Confidence 34444 234343457888887655544555566555554432111 1211222234455555555556688665 58
Q ss_pred EEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhHH---HHhcCcEEEEeccCC--------CCCCCCCH--HHHHHh
Q 015768 93 MVTAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMS---FQMTGVTHILVGPCS--------SKTLHPDA--DWLEKT 158 (400)
Q Consensus 93 ~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~--------~~~~~~~~--e~l~~~ 158 (400)
+||+|+|+|++.++.++ .++||+|+++.-.|++.... ++..|+++..+ +.+ ..+ .+++ +.+++.
T Consensus 101 vFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v-~~~~~~~~~~~~~g-~~~~~~~~l~~~ 178 (805)
T PLN02724 101 VFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAV-DIEEAANQPTNSQG-SVVVKSRGLQRR 178 (805)
T ss_pred EEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEec-cchhcccccccccc-ccccchhhhhhh
Confidence 99999999999999998 57899999998888776643 34568888888 765 222 2332 556654
Q ss_pred hc--------cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-----CCEEEEcccccccccCCCCccccCCCcEE
Q 015768 159 LE--------TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-----GSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 159 l~--------~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-----~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
++ .....++|.+++.+|.+|.++|.+.+..+.+.++.+ ++++++|.+++... .+......+.++
T Consensus 179 ~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~---~piDv~~~~~Df 255 (805)
T PLN02724 179 NTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT---SPPDLSRYPADF 255 (805)
T ss_pred hhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC---CCCChhhcCCCE
Confidence 31 012248999999999999999955433333322222 36799999998432 233333457789
Q ss_pred EEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc------------------------cCCcCccHHHHHHHHHHhc
Q 015768 226 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD------------------------NIPICASIISQHLALYSLQ 281 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~~~~~~~~~l~ 281 (400)
++.|++|++| +...+|+++.+ +++.+.+..... .-..++|.+...++.++++
T Consensus 256 l~~S~HK~~G-gP~G~G~L~vr---~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~ 331 (805)
T PLN02724 256 VVVSFYKIFG-YPTGLGALLVR---RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFK 331 (805)
T ss_pred EEEecceecc-CCCCceEEEEe---hhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHH
Confidence 9999999997 23347888888 555555443211 0122466666666666666
Q ss_pred CCcH-HHHHHHHHHHHHHHHHHHHhccCC------CCcccCCC--------CceEEEeeCCCC---CCCHHHHHHHHHHh
Q 015768 282 TGPE-WVTERVKDLVRNREIIREALSPLG------EGAVKGGE--------GAIYLWARLPEK---HLDDFEVVRWLAHR 343 (400)
Q Consensus 282 ~~~~-~~~~~~~~~~~~~~~l~~~L~~~~------~~~~~~~~--------~~~~~~~~~~~~---~~~~~~~~~~l~~~ 343 (400)
...+ .+++..++..++.+++.+.|++++ .+.++++. -+..+.+.+... .....+ +.+++.+
T Consensus 332 ~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~-v~~l~~~ 410 (805)
T PLN02724 332 LLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHRE-VEKLASL 410 (805)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHH-HHHHHHh
Confidence 4222 246667778888999999998875 34555432 123443444321 112233 4456678
Q ss_pred cCeEEeCCCccCC-----------------------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 344 HGVVVIPGGACGC-----------------------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 344 ~gi~v~~g~~~~~-----------------------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
+||.++.|..|.. .+.+|+|++. +|.+|++.+++.|++.+-.-
T Consensus 411 ~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 411 SGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVST 489 (805)
T ss_pred cCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhcC
Confidence 8999999988741 2789999999 99999999999999977543
No 270
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=7.2e-22 Score=186.50 Aligned_cols=290 Identities=19% Similarity=0.192 Sum_probs=192.0
Q ss_pred HHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCCC
Q 015768 74 RDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLH 149 (400)
Q Consensus 74 ~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~ 149 (400)
.+.+++.+++..|. +..+++++|+.|+..++.++.++||+|++....|.+.... +...|++++.+ + +.
T Consensus 71 ~~~Le~~lA~l~g~--~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d-d~---- 142 (436)
T PRK07812 71 QDVVEQRIAALEGG--VAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFV-E-DP---- 142 (436)
T ss_pred HHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEE-C-CC----
Confidence 34455555544464 4578888899999999999999999999999999776643 34578888777 4 22
Q ss_pred CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEec
Q 015768 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS 229 (400)
Q Consensus 150 ~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s 229 (400)
.|++.+++.+++++ ++|++++|+||+|.+.| +++|.++|+++|+++|+|+++..... ......+.++++.|
T Consensus 143 ~d~e~l~~ai~~~t--klV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~----~~pl~~GaDivv~S 213 (436)
T PRK07812 143 DDLDAWRAAVRPNT--KAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL----IRPLEHGADIVVHS 213 (436)
T ss_pred CCHHHHHHhCCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CCchhcCCCEEEEe
Confidence 27899999888766 99999999999999999 89999999999999999999874322 12234567799999
Q ss_pred cccccCCCcceeEEEEccCCc----------------------------HHHHHHHH-HhhccCCcCccHHHHHHHHHHh
Q 015768 230 FSKAYGMMGWRVGYIAYPSEV----------------------------EGFATQLL-KVQDNIPICASIISQHLALYSL 280 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~~~~~----------------------------~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~l 280 (400)
++|++|..|--+|.++..+.. +++..+.. .........+++...+.+...|
T Consensus 214 ~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl 293 (436)
T PRK07812 214 ATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGL 293 (436)
T ss_pred cccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCc
Confidence 999997666555554443210 01110111 1222234556666666555555
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHHHHHHHHHH
Q 015768 281 QTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
+. +..+.++..+++..+.+.|++++.+. +..| . .|-.+.+.+........++++.| +
T Consensus 294 ~t----L~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l-~ 368 (436)
T PRK07812 294 ET----LSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNAL-T 368 (436)
T ss_pred Cc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhC-C
Confidence 54 68888999999999999999987632 2222 1 23455566643211123344333 1
Q ss_pred hcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 343 RHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 343 ~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
=..+.+.-|... + .++.+|||++. |+.+++++.|.+++....+
T Consensus 369 l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl---Ed~~dli~dl~~Al~~~~~ 434 (436)
T PRK07812 369 LHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI---EGIDDILADLEAGFAAAKA 434 (436)
T ss_pred cceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHHhhhc
Confidence 112222222221 0 13579999997 6677888888888876543
No 271
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.91 E-value=1.2e-21 Score=186.84 Aligned_cols=346 Identities=13% Similarity=0.115 Sum_probs=221.1
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCc-EEEeCChHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSS-VMVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~-i~~~~g~t~ 100 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+...... ..-..+.+.++++.|.+..... ... +++++++++
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsE 113 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT--LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGAD 113 (442)
T ss_pred CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc--cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHH
Confidence 5678899998876 4443 789999999998876321111 1112355666777776654321 134 455689999
Q ss_pred HHHHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cC-------c-----EEEEeccCCCC-C--CC----CCH----HH
Q 015768 101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG-------V-----THILVGPCSSK-T--LH----PDA----DW 154 (400)
Q Consensus 101 a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g-------~-----~~~~~~~~~~~-~--~~----~~~----e~ 154 (400)
|++.+++... ....+|+....+|++....... .| . .+..+ |..+. . ++ .+. +.
T Consensus 114 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 192 (442)
T TIGR00709 114 AVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFM-PYPHEYRCPFGIGGEAGSNASIEY 192 (442)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEe-CCCccccccccCCchhHHHHHHHH
Confidence 9999999764 2336899999999997754432 22 0 12222 22110 0 00 011 22
Q ss_pred HHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEE
Q 015768 155 LEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNL 227 (400)
Q Consensus 155 l~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~ 227 (400)
+++.+. ....+.+++++..++..|. .+|.++++++.++|++||+++|.||++.+|...+..+... .-..+++
T Consensus 193 ~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv- 271 (442)
T TIGR00709 193 FENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFV- 271 (442)
T ss_pred HHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEE-
Confidence 333332 1123678888866555554 5899999999999999999999999999886655322111 1122344
Q ss_pred eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
+++|.++ .|+++|+++.+ ++ .+.+.......+++.+++++.++.+.|+..++ ....++.+++.+++.+.|++
T Consensus 272 -~~gK~l~-~G~Pigav~~~---~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~L~~ 343 (442)
T TIGR00709 272 -VMSKAVG-GGLPLAVLLIA---PE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKD--DNLAQNAQERGERITSFLDD 343 (442)
T ss_pred -EEccccc-CCcccEEEEEc---hH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHH
Confidence 3789998 58999999988 55 34443333456888999999999999975221 23445566666666666654
Q ss_pred ----CCCCcccCCCCceEEEeeCCCCC--------C-----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCH
Q 015768 308 ----LGEGAVKGGEGAIYLWARLPEKH--------L-----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVE 369 (400)
Q Consensus 308 ----~~~~~~~~~~~~~~~~~~~~~~~--------~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~ 369 (400)
++.+.-+... |.++.+.+.... . ....+...++ ++|+.+.+... ..+.+|+.++. +|+
T Consensus 344 l~~~~~~v~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~--~~~~l~~~Ppl~it~ 419 (442)
T TIGR00709 344 MIKEHPCIGNVRGR-GLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACF-ENGLLLETGGR--EGEVFRLLCPITIDQ 419 (442)
T ss_pred HHHhCCCeeeeecc-ceEEEEEEccCcccccccccCCcchHHHHHHHHHHH-HCCeEEeecCC--CCCEEEEECCCCCCH
Confidence 3433333344 566666553210 0 1234555554 89999976432 25789999887 899
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 015768 370 DDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 370 ~~~~~~~~~l~~~l~~~~~ 388 (400)
++++++++++.+++.++.+
T Consensus 420 ~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 420 EECEEGISRFKQAVEEALA 438 (442)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988644
No 272
>PRK06541 hypothetical protein; Provisional
Probab=99.91 E-value=1.9e-21 Score=185.74 Aligned_cols=347 Identities=16% Similarity=0.101 Sum_probs=224.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++++++.+.+.+..... ......+...++++.+.+....+.+.++|++++++|++
T Consensus 49 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~--~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve 126 (460)
T PRK06541 49 DRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFP--LWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVE 126 (460)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcc--ccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHH
Confidence 4578899998874 4454 68999999999988642110 11112344455666666554323478999999999999
Q ss_pred HHHHHhcC-------C-CCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCCC----CCCCC-------
Q 015768 104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSK----TLHPD------- 151 (400)
Q Consensus 104 ~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~----~~~~~------- 151 (400)
.+++.... + ..+|+....+|++....... .|. .+..+ |...- ++.-+
T Consensus 127 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 205 (460)
T PRK06541 127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRV-PNTNFYRAPELGDDPEAFGRW 205 (460)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEe-CCCccccccccCCCHHHHHHH
Confidence 99987642 1 36899999999887643322 111 11222 21110 01111
Q ss_pred -HHHHHHhhcc--CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEE
Q 015768 152 -ADWLEKTLET--KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVV 225 (400)
Q Consensus 152 -~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i 225 (400)
++.+++.+.. ...+.+|+++..+++.|.+. |.+++++|.++|++||+++|+||++.++...+........ ..++
T Consensus 206 ~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDi 285 (460)
T PRK06541 206 AADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDI 285 (460)
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCE
Confidence 3667777752 22356666665588899875 5899999999999999999999999766433322111111 1233
Q ss_pred EEeccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 226 NLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 226 ~~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+ +++|.+| +|+ ++|+++.+ +++.+.+... ....+++.++++..++.+.|+...+ ....++.+++.++
T Consensus 286 v--t~gK~l~-~G~~pigav~~~---~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~--~~~~~~~~~~g~~ 357 (460)
T PRK06541 286 I--TCAKGIT-SGYSPLGAMIAS---DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER--EGLLDHVRDNEPA 357 (460)
T ss_pred E--Eeccccc-CCccceeEEEEc---HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence 3 5799998 786 99999998 6777766532 2335777888998888888875221 2455677777788
Q ss_pred HHHHhccCC---CCcccCCCCceEEEeeCCCCC-----C-C------H-HHHHHHHHHhcCeEEeCCCccCCCCeEEEEe
Q 015768 301 IREALSPLG---EGAVKGGEGAIYLWARLPEKH-----L-D------D-FEVVRWLAHRHGVVVIPGGACGCRGHLRISF 364 (400)
Q Consensus 301 l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~-----~-~------~-~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~ 364 (400)
|.+.|+++. .+..+... |.++-+.+.... . + . ..+...++ ++||++.+.. .+.+.+||++
T Consensus 358 l~~~L~~l~~~~~v~~vrg~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~--~g~~~lrl~P 433 (460)
T PRK06541 358 FRATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSPALF-EAGLYCRADD--RGDPVVQLAP 433 (460)
T ss_pred HHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHH-hCCeEEEecC--CCCCEEEEEC
Confidence 877777652 22223344 555555542210 0 0 0 23455555 7999998732 1347899998
Q ss_pred cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 365 GG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 365 ~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.. +|++++++++++|.++++++..
T Consensus 434 pl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 434 PLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 86 7999999999999999987643
No 273
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.91 E-value=9.3e-22 Score=185.94 Aligned_cols=340 Identities=13% Similarity=0.091 Sum_probs=223.8
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+....... ....+.+..+++.|.+....+.+.+++++++++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve 117 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVE 117 (428)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHH
Confidence 4578899998875 4443 6899999999998864311111 112344566777776654433478999999999999
Q ss_pred HHHHHhcC-------CCCEEEEeCCCccchhHHHHhc-Cc-------------EEEEeccCCCCCC-----CCCHHHHHH
Q 015768 104 NIVLTLCD-------AGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSSKTL-----HPDADWLEK 157 (400)
Q Consensus 104 ~~~~~l~~-------~gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~~~e~l~~ 157 (400)
.+++.... +..+|+....+|++........ +- .++.+ |.....+ .-|++++++
T Consensus 118 ~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~d~~~l~~ 196 (428)
T PRK07986 118 VAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFA-PAPQSRFDGEWDERDIAPFAR 196 (428)
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEE-CCCCcccchhhHHHHHHHHHH
Confidence 99997642 2368999999998865332211 21 11122 2111100 125677888
Q ss_pred hhcc-CCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEecccc
Q 015768 158 TLET-KPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFSK 232 (400)
Q Consensus 158 ~l~~-~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~sK 232 (400)
.+.. ...+.+|+++.. +...|. .++.+.+++|.++|++||+++|+||++.++...|..+..... ..+++ +++|
T Consensus 197 ~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~--t~gK 274 (428)
T PRK07986 197 LMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDIL--CLGK 274 (428)
T ss_pred HHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEE--Eech
Confidence 7752 223567777753 666676 457789999999999999999999999776444432211111 22344 5799
Q ss_pred ccCCCc-ceeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768 233 AYGMMG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306 (400)
Q Consensus 233 ~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 306 (400)
.++ +| +.+|.++++ +++.+.+... ....+++.++++..++.+.|+.-++ .+..++.+++.+++++.|+
T Consensus 275 ~l~-gG~~p~~av~~~---~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~--~~~~~~~~~~g~~l~~~l~ 348 (428)
T PRK07986 275 ALT-GGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES--GDWQQQVAAIEAQLREELA 348 (428)
T ss_pred hhh-CCcccCcchhch---HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH
Confidence 997 77 588988888 7888777542 2456788899999998888875221 1345566666677776666
Q ss_pred cC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 307 PL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 307 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
++ +.+.-++.. |.+..+.+.... +...+...++ ++|+++.+. .+.+|+.+.. .|++++++++++|.++
T Consensus 349 ~l~~~~~i~~vRg~-Gl~~~ve~~~~~-~~~~~~~~l~-~~Gl~~~~~-----g~~i~~~Ppl~it~~ei~~~~~~l~~~ 420 (428)
T PRK07986 349 PLRDAPMVADVRVL-GAIGVVETTRPV-NMAALQRFFV-EQGVWIRPF-----GKLIYLMPPYIILPEQLQRLTAAVNRA 420 (428)
T ss_pred HHhcCCCEEeEecc-ceEEEEEeCCcc-cHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 54 222222333 556666664322 3456777665 899999763 2589999877 8999999999999999
Q ss_pred HHH
Q 015768 383 LEE 385 (400)
Q Consensus 383 l~~ 385 (400)
+.+
T Consensus 421 l~~ 423 (428)
T PRK07986 421 VQD 423 (428)
T ss_pred Hhh
Confidence 864
No 274
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=8e-22 Score=166.93 Aligned_cols=322 Identities=16% Similarity=0.178 Sum_probs=225.6
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAP 121 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p 121 (400)
.|..+++++|.++...... |+..+....+++.+|+.. | .+.-+|++++|.++.++++.= -++|.+|++.+.
T Consensus 33 ~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~----G--KEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~ 104 (384)
T KOG1368|consen 33 VPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELF----G--KEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDR 104 (384)
T ss_pred CChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHh----C--ccceeeecccccccHHHHHHHhcCCCceEEeccc
Confidence 3567888888887765444 544555667777777765 4 466688888888888888775 469999999999
Q ss_pred Cccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-cC-----CCCeEEEEeCCCCCCc-cCCCHHHHHHHHH
Q 015768 122 YYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TK-----PTPKLVSVVNPGNPSG-TYIPERLLKRISD 191 (400)
Q Consensus 122 ~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~-----~~~~~v~l~~p~nptG-~~~~~~~l~~i~~ 191 (400)
+|--.+ .+....|+.+.++ ...++| .++++++++.+. ++ +..++|.++|.+|.+| .++|.|++.++.+
T Consensus 105 ~HI~~~E~gg~s~l~gv~~~tv-~~e~dg-tm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368|consen 105 AHIHRYEQGGISQLAGVHVRTV-KNENDG-TMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred hheeehhccChhhhccceeEee-eeCCCC-eeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHH
Confidence 883322 3445678888888 444444 689999999997 22 3358999999876555 9999999999999
Q ss_pred HHHHcCCEEEEcccccccccC--CCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCcc
Q 015768 192 LCKAAGSWLVVDNTYEYFMYD--GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 269 (400)
Q Consensus 192 l~~~~~~~li~D~a~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (400)
+|++||+.++.|.+..+.... +.+....-...+-+---+||.+|.| +|.++..+ ++++++.+.++.....++-
T Consensus 183 lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAP---VGSViVG~--k~FI~kA~~~RKalGGGmR 257 (384)
T KOG1368|consen 183 LAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAP---VGSVIVGS--KDFIDKARHFRKALGGGMR 257 (384)
T ss_pred HHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCC---cccEEEcc--HHHHHHHHHHHHHhcCchh
Confidence 999999999999997654432 2221111111122333568998644 57655443 8898888777766566665
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768 270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348 (400)
Q Consensus 270 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 348 (400)
.....+++..+...+.+ + ..+.-.+++..+.+.++..+.+++-.+ ...+++.+.+.....+.++++..+. ++||.+
T Consensus 258 QsGvLaaaaLval~~~~-~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~-k~gi~l 334 (384)
T KOG1368|consen 258 QSGVLAAAALVALDENV-P-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLE-KNGILL 334 (384)
T ss_pred HHHHHHHHHHHHhhcch-H-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHH-HCCeEE
Confidence 55555555544432332 2 455566777888888888776555443 3367777776666678999999885 899999
Q ss_pred eCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 349 IPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 349 ~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++. ...+|+.+++ .++++++..+..+.+.+...
T Consensus 335 m~~~----s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q 369 (384)
T KOG1368|consen 335 MGGA----SRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQ 369 (384)
T ss_pred eecc----ccceEEEEEEecCHHHHHHHHHHHHHHHHhh
Confidence 9865 4459999999 99999999999995444433
No 275
>PLN02271 serine hydroxymethyltransferase
Probab=99.91 E-value=5.5e-21 Score=179.61 Aligned_cols=358 Identities=14% Similarity=0.076 Sum_probs=249.1
Q ss_pred hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhcC
Q 015768 13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~~ 86 (400)
..+...+.-+.+..+.+..-|+|-.++|.. ++.|++++...+.+....+ |+.....++++....++..+.++
T Consensus 131 ~~Dpei~~li~~E~~rQ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~ 208 (586)
T PLN02271 131 EADPDIHELMEKEKQRQFKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFG 208 (586)
T ss_pred hhCHHHHHHHHHHHHHHhcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhC
Confidence 334555555566667777889998877664 5899999888876633222 33344456777777788888888
Q ss_pred CCC----CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH---------HhcC--cEEEEeccCCCCCCCCC
Q 015768 87 LYK----SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF---------QMTG--VTHILVGPCSSKTLHPD 151 (400)
Q Consensus 87 ~~~----~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~---------~~~g--~~~~~~~~~~~~~~~~~ 151 (400)
++. -+|... +++.|+..++.++++|||+|+..+..|.++.... ...| ++.+.+ +++++...+|
T Consensus 209 ~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY-~~d~~~g~ID 286 (586)
T PLN02271 209 LDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPY-KVNPQTGYID 286 (586)
T ss_pred Ccccccccceeec-cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEc-ccccccCccC
Confidence 775 455555 6779999999999999999999988887766432 2345 345555 5766666799
Q ss_pred HHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc
Q 015768 152 ADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF 230 (400)
Q Consensus 152 ~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~ 230 (400)
.+++++... .+ ||+|++....+| ..+| ++++.++|+++|+++++|.+|..+...+..+.......+++++|.
T Consensus 287 yd~lek~a~~~r--PKLII~g~Sayp--r~~D---~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TT 359 (586)
T PLN02271 287 YDKLEEKALDFR--PKILICGGSSYP--REWD---YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTT 359 (586)
T ss_pred HHHHHHHhhhcC--CeEEEECchhcc--CcCC---HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCC
Confidence 999998544 44 599998877777 7788 888888999999999999999876654433322233478999999
Q ss_pred ccccCCCcceeEEEEccCCc-----------------HHHHHHHHHhhcc-CCcCccHHHHHHHHHHhcC-CcHHHHHHH
Q 015768 231 SKAYGMMGWRVGYIAYPSEV-----------------EGFATQLLKVQDN-IPICASIISQHLALYSLQT-GPEWVTERV 291 (400)
Q Consensus 231 sK~~g~~g~~~G~i~~~~~~-----------------~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~-~~~~~~~~~ 291 (400)
+|++ .|.|.|.+..+++. +++.+++...... ...++......+.+.++.. ....++++.
T Consensus 360 HKtL--rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya 437 (586)
T PLN02271 360 HKSL--RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYM 437 (586)
T ss_pred cccC--CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHH
Confidence 9998 46666888876420 2345555543321 1222222334444455553 124458999
Q ss_pred HHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEecc
Q 015768 292 KDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG 366 (400)
Q Consensus 292 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~ 366 (400)
+++.+|++.|.+.|.+.+...+.+......+++++.....++...-. ++++.||.+.--..++ .++.|||+...
T Consensus 438 ~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~-~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~a 516 (586)
T PLN02271 438 QQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEK-VCEMCHITLNKTAIFGDNGTISPGGVRIGTPA 516 (586)
T ss_pred HHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHH-HHHHcCeEeccccCCCCCCCCCCCcccccCHH
Confidence 99999999999999998874455656578888898765546655554 5578999985433222 36789998653
Q ss_pred -----CCHHHHHHHHHHHHHHHH
Q 015768 367 -----LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 367 -----~~~~~~~~~~~~l~~~l~ 384 (400)
+.++|+.+..+.+.++++
T Consensus 517 lT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 517 MTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHhcCCCcHHHHHHHHHHHHHHh
Confidence 466888888888888877
No 276
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.91 E-value=8.2e-22 Score=184.91 Aligned_cols=316 Identities=13% Similarity=0.044 Sum_probs=211.9
Q ss_pred CCcHH-HHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeC-ChHHHHHHHHHHhcCC-CCEEEE
Q 015768 43 QPPKM-AMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTA-GANQAFVNIVLTLCDA-GDSVVM 118 (400)
Q Consensus 43 ~~~~~-v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~-g~t~a~~~~~~~l~~~-gd~vlv 118 (400)
.+++. |++++.+..... ........++.+.+.+.+++.++.+ +++|++++ |+|.+++.++.++.++ ++.|++
T Consensus 22 ~~~~~~v~~a~~~~~~~~----~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~ 97 (378)
T PRK03080 22 KKRPGWQLEALADALLGR----SHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA 97 (378)
T ss_pred CCChHHHHHHHHhhhccc----CcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE
Confidence 34566 999888654321 1122334566667777777777875 46798885 8999999999999875 444444
Q ss_pred eCCCccc-hhH-HHHhcCc-EEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015768 119 FAPYYFN-SYM-SFQMTGV-THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (400)
Q Consensus 119 ~~p~~~~-~~~-~~~~~g~-~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~ 195 (400)
...|.. +.. ..+..|+ ++..+ +.+ ++..+|++.++ . + ++|.+++.+|.||...| +++|++ ++
T Consensus 98 -~g~f~~~~~~~~~~~~g~~~v~~~-~~~-~g~~~d~~~i~----~-~--~~V~~~h~~t~tG~~~p---i~~I~~--~~ 162 (378)
T PRK03080 98 -WESFGSKWATDVVKQLKLEDPRVL-EAD-YGSLPDLSAVD----F-D--RDVVFTWNGTTTGVRVP---VARWIG--AD 162 (378)
T ss_pred -eCHHHHHHHHHHHhhcCCCCceEe-ccC-CCCCCCHhhcC----C-C--CCEEEEecCCccceecc---chhhcc--cc
Confidence 455544 223 2356788 88888 665 44466766633 2 3 67899999999999999 777777 78
Q ss_pred cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh--------------
Q 015768 196 AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------------- 261 (400)
Q Consensus 196 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------------- 261 (400)
+|+++++|.+++.+ ..+.... +.+++++|.+|+++ +..++|+++.+ ++..+++....
T Consensus 163 ~g~~~vVDa~qs~G---~~pidv~--~iD~~~~s~~K~l~-~P~G~g~l~v~---~~~~~~~~p~~~~~~~~~~~~~~~~ 233 (378)
T PRK03080 163 REGLTICDATSAAF---ALPLDWS--KLDVYTFSWQKVLG-GEGGHGMAILS---PRAVERLESYTPARPIPKFFRLTKG 233 (378)
T ss_pred CCCeEEEecccccc---cCCCCHH--HCcEEEEehhhhCC-CCCceEEEEEC---HHHHHhhhcccCCCCCchhheeccc
Confidence 89999999999843 3333332 25799999999996 33457998888 66666654311
Q ss_pred ---------ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCcccC--C--CCceEEEeeC
Q 015768 262 ---------DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKG--G--EGAIYLWARL 326 (400)
Q Consensus 262 ---------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~--~~~~~~~~~~ 326 (400)
..+..+++.....++..+|+...+ ..+++.++.+++.+++++.|+++++..+.. + .+...+.+.+
T Consensus 234 ~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~ 313 (378)
T PRK03080 234 GKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDF 313 (378)
T ss_pred hHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEc
Confidence 111234555556554555553222 357778888999999999999887644432 1 2234555666
Q ss_pred CCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 327 PEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 327 ~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+... ....++...++ ++|+.+..|......+.+|+|++. ++.+|++.+++.|+++++++.
T Consensus 314 ~~~~~~~~~~~~~~l~-~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 314 VDAQAAVDAAAVAKLL-RENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred CCchHHHHHHHHHHHH-HcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 6400 01234566665 568888776543345789999988 999999999999999887654
No 277
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.91 E-value=1.7e-21 Score=197.01 Aligned_cols=344 Identities=15% Similarity=0.090 Sum_probs=243.5
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH----HH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGAN----QA 101 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t----~a 101 (400)
+..+|++++..+-+.+.-+..-+-...+.+ .++|.|. +|..++.+.+.+++++..|. +.|.|+++++ ++
T Consensus 524 ~~~~~plgsctmk~n~~~~~~~~~~~~~~~--~hp~~p~~~~~g~~~~~~~~r~~la~i~g~--~~v~f~pnaga~ge~a 599 (993)
T PLN02414 524 VHSMIPLGSCTMKLNATTEMMPVTWPEFAN--IHPFAPVDQAQGYQEMFEDLGDLLCEITGF--DSFSLQPNAGAAGEYA 599 (993)
T ss_pred ccCCccCcccccccCchhhhhhhcCcchhh--cCCCCCHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEcCCCcHHHHHH
Confidence 456677777665553222222111111121 5566553 56667777888888888786 9999999999 89
Q ss_pred HHHHHHHhcCC-CC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCC
Q 015768 102 FVNIVLTLCDA-GD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGN 175 (400)
Q Consensus 102 ~~~~~~~l~~~-gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~n 175 (400)
++.+++++.++ || +|+++...|.+....+...|++++.+ |.+++| .+|+++|++.+++++ ..++|++++|+|
T Consensus 600 ~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v-~~d~~G-~vDle~L~~~i~~~~~~ta~V~vt~pSn 677 (993)
T PLN02414 600 GLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVV-GTDAKG-NINIEELRKAAEAHKDNLAALMVTYPST 677 (993)
T ss_pred HHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEe-ccCCCC-CcCHHHHHHHHhccCCCeEEEEEECCCc
Confidence 99999999866 88 89999999999988888899999999 888766 789999999998532 358999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC----CCcceeEEEEccCCcH
Q 015768 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVE 251 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~G~i~~~~~~~ 251 (400)
.+|...+ +++|+++|+++|+++++|.++.....+ .......+.|++++|.+|+|+ .+|..+|++.++ +
T Consensus 678 ~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~~--l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~---~ 749 (993)
T PLN02414 678 HGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQVG--LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---K 749 (993)
T ss_pred cccccch---HHHHHHHHHHcCCEEEEEecCHHhccC--cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEc---h
Confidence 9999999 999999999999999999999743221 122335578899999999874 245568999888 5
Q ss_pred HHHHHHHHhh-----------ccC-CcC------ccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 015768 252 GFATQLLKVQ-----------DNI-PIC------ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGA 312 (400)
Q Consensus 252 ~~~~~l~~~~-----------~~~-~~~------~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 312 (400)
.+...+.... ... ..+ .+.....++..++.. |.+.+++..+....+++++++.|++...+.
T Consensus 750 ~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~ 829 (993)
T PLN02414 750 HLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL 829 (993)
T ss_pred hhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 5544433210 000 011 112333334444443 557778888889999999999998744444
Q ss_pred ccCCCCce--EEEeeCCC----CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 313 VKGGEGAI--YLWARLPE----KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 313 ~~~~~~~~--~~~~~~~~----~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
+..+.+.. =+.++++. ...+..++..+|+ ++||....-. |-.++.+|++++- .+.+|+|++++++.+...+
T Consensus 830 ~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~-d~Gihapt~~-~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 830 FRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM-DYGFHAPTMS-WPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred ccCCCCCeeeeEEEeccccccccCCCHHHHHHHHH-HcCcEEeeec-cccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 44443221 12234431 1245688999998 8999864422 3357899999987 8999999999999998888
Q ss_pred Hhc
Q 015768 386 LVK 388 (400)
Q Consensus 386 ~~~ 388 (400)
..+
T Consensus 908 ~~~ 910 (993)
T PLN02414 908 IAD 910 (993)
T ss_pred HHH
Confidence 764
No 278
>PRK06062 hypothetical protein; Provisional
Probab=99.91 E-value=4e-21 Score=183.24 Aligned_cols=345 Identities=15% Similarity=0.130 Sum_probs=221.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.... .. .-..+.+.++++.|.+...-..+.++|++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~--~~-~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve 126 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTV--AP-AHANDARSEAARLIAERAPGDLSKVFFTNGGADANE 126 (451)
T ss_pred CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCc--CC-ccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHH
Confidence 4578899998875 4454 7899999999998864321 11 112344566677766554323478999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc-----------EEEEeccCCC-C--CC--CCC-------HHHHHH
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-----------THILVGPCSS-K--TL--HPD-------ADWLEK 157 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~-----------~~~~~~~~~~-~--~~--~~~-------~e~l~~ 157 (400)
.+++... ....+|+....+|++....... .+. .+..+ +.+. . .+ .-+ ++.+++
T Consensus 127 ~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~le~ 205 (451)
T PRK06062 127 HAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHF-FGPFLYRSEFHATTEEEECERALAHLER 205 (451)
T ss_pred HHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEe-CCCCccccccCCCChHHHHHHHHHHHHH
Confidence 9999764 2336899999999887644322 211 11111 1110 0 01 012 577787
Q ss_pred hhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc
Q 015768 158 TLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY 234 (400)
Q Consensus 158 ~l~~--~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 234 (400)
.++. ...+.+|+++..+...|.+ +|.+++++|.++|++||+++|+||++.+|...|..+.....+...-+.+++|.+
T Consensus 206 ~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~l 285 (451)
T PRK06062 206 VIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGV 285 (451)
T ss_pred HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhh
Confidence 7752 2346788888666666775 688899999999999999999999999765433221111111112244678999
Q ss_pred CCCcc-eeEEEEccCCcHHHHHHHHHh--hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH-HHHHHHhcc---
Q 015768 235 GMMGW-RVGYIAYPSEVEGFATQLLKV--QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR-EIIREALSP--- 307 (400)
Q Consensus 235 g~~g~-~~G~i~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~l~~~L~~--- 307 (400)
| .|. ++|.++.+ +++.+.+... ....+++.++++..++.+.|+..++ ....++.++.. +++++.|++
T Consensus 286 g-gG~~Pigav~~~---~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~G~~~l~~~L~~l~~ 359 (451)
T PRK06062 286 N-SGYVPLGGVAIS---EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE--EGIVENAARIGAEVLGPGLRELAE 359 (451)
T ss_pred h-cCCcCcEEEEEc---HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7 674 89999988 6777776532 3446888899999999998875221 12334444443 344444443
Q ss_pred -CCCCcccCCCCceEEEeeCCCC-----CC--------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHH
Q 015768 308 -LGEGAVKGGEGAIYLWARLPEK-----HL--------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDC 372 (400)
Q Consensus 308 -~~~~~~~~~~~~~~~~~~~~~~-----~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~ 372 (400)
.+.+..+... |.++-+.+... .. ....+...++ ++||++.+ ..+.+|+++.. +|++++
T Consensus 360 ~~~~v~~vrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gvl~~~-----~~~~lrl~ppl~~t~~ei 432 (451)
T PRK06062 360 RHPSVGEVRGL-GVFWALELVADRETREPLAPYGASSAAMAAVKAACK-ERGLLPFV-----NGNRIHVVPPCTVTEDEV 432 (451)
T ss_pred cCCcEEeEecc-ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH-HCCcEEee-----cCCEEEEECCccCCHHHH
Confidence 3432233344 45544444211 00 1235666665 79999865 24689999876 799999
Q ss_pred HHHHHHHHHHHHHHhc
Q 015768 373 KAAADRLRRGLEELVK 388 (400)
Q Consensus 373 ~~~~~~l~~~l~~~~~ 388 (400)
++++++|.++++++..
T Consensus 433 d~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 433 REGLAILDAALAVADA 448 (451)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999987643
No 279
>PLN03032 serine decarboxylase; Provisional
Probab=99.91 E-value=5.2e-21 Score=176.46 Aligned_cols=309 Identities=12% Similarity=0.048 Sum_probs=218.6
Q ss_pred cHHHHHHHHHhhcCCCCCC---CCCCCCcHHHHHHHHHHHHhhcCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCEEE
Q 015768 45 PKMAMEKVKELVWDPSISK---YGADEGLPELRDALVKKLNQENKLYKSSV--MVTAGANQAFVNIVLTLC--DAGDSVV 117 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~---y~~~~g~~~~~~~~a~~l~~~~~~~~~~i--~~~~g~t~a~~~~~~~l~--~~gd~vl 117 (400)
.+.+++++...+.++...+ +.......++.+++.+++++.+|.+++++ ++|+|+|+|+..++.+.. .++..|+
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi 115 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILY 115 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEE
Confidence 4456788888776532222 22234568899999999999999988776 999999999999888765 3456899
Q ss_pred EeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
++.-.|+++..+++.+|..+..+ |.+++| .+|+++|++.+++++ .+.+|+++..+|++|.+.| +++|+++|+++
T Consensus 116 ~s~~~H~Sv~kaa~~lg~~~~~V-~~d~~g-~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~ 190 (374)
T PLN03032 116 ASRESHYSVFKAARMYRMEAVKV-PTLPSG-EIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKEL 190 (374)
T ss_pred eCCCceeHHHHHHHHcCCCCeEe-eeCCCC-cCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHh
Confidence 99999999999999999988888 888776 689999999998532 2578888889999999999 88999999999
Q ss_pred C-----CEEEEcccccccccC----CCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc----
Q 015768 197 G-----SWLVVDNTYEYFMYD----GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN---- 263 (400)
Q Consensus 197 ~-----~~li~D~a~~~~~~~----~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~---- 263 (400)
| +|+++|.+++.+... ...... ..+.+.+..|.||.+| .+..+|.++.++ +..+.+......
T Consensus 191 g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~-~~~vDSis~s~HK~~g-~P~g~G~ll~r~---~~~~~~~~~~~Yl~~~ 265 (374)
T PLN03032 191 GYTEDRFYIHCDGALFGLMMPFVSRAPEVTF-RKPIGSVSVSGHKFLG-CPMPCGVALTRK---KHVKALSQNVEYLNSR 265 (374)
T ss_pred CCCCCCeeEEEEccchhhhhhccCCCcccCC-CcCCcEEEECcccccC-CCcCeEEEEEEc---hhhHhhccCCcccCCC
Confidence 6 599999999865431 111111 1245677889999886 456689998884 444444221110
Q ss_pred -CCc--Ccc---HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768 264 -IPI--CAS---IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 337 (400)
Q Consensus 264 -~~~--~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (400)
.+. +-+ .+..++.... .+.+.+.++.++..++++++.+.|++.+...+..|. .+.+.++-+. .+
T Consensus 266 d~ti~gSR~g~~~l~~w~~l~~--~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~-~~~V~f~~~~----~~--- 335 (374)
T PLN03032 266 DATIMGSRNGHAPLYLWYTLRR--KGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNEL-SSTVVFERPM----DE--- 335 (374)
T ss_pred CCcccCCCchHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCC-ceEEEEcCCC----cH---
Confidence 111 112 2333333222 356778899999999999999999998764455665 5666666552 11
Q ss_pred HHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
.+. +|..+.+ .++++|+++.. .+.+.++++++.|++
T Consensus 336 -~~~--~~w~l~~-----~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 336 -AFI--KKWQLAC-----EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred -hHh--heeeecc-----cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 122 4555553 23588998665 677888888877764
No 280
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.90 E-value=4.7e-22 Score=180.41 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=156.5
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCC--
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKT-- 147 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-- 147 (400)
..+.++.+++++ |.+ +.+++++|+|.++..++.++++|||+|+++.++|.++...++..|++++++ +.+.+.
T Consensus 61 i~~~~~~~A~~~----ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v-~~~~~~~~ 134 (294)
T cd00615 61 IKEAQELAARAF----GAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYL-KPERNPYY 134 (294)
T ss_pred HHHHHHHHHHHh----CCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEe-cCccCccc
Confidence 344555555554 643 345559999999999999999999999999999999999999999999888 554321
Q ss_pred ---CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCC-CccccCCC
Q 015768 148 ---LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGR-KHCCVEGD 222 (400)
Q Consensus 148 ---~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~-~~~~~~~~ 222 (400)
..++++.+++.++.++.++++++++| |++|.++| +++|.++|+++|+++|+|++|+... +.+. +......+
T Consensus 135 ~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 135 GIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred CcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcC
Confidence 36799999999975545699999998 78999999 8999999999999999999997432 3221 22223357
Q ss_pred cEEEEeccccccCCCcceeEE-EEccCCcHHHHHHHHHh-hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 223 HVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKV-QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 223 ~~i~~~s~sK~~g~~g~~~G~-i~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
.++++.|+||++ +|++.|+ +..++.. ...+++... ....+.+++.+...++..++........++.+++.++.+.
T Consensus 211 ~div~~S~hK~l--~g~~~~~~l~~~~~~-~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~ 287 (294)
T cd00615 211 ADIVVQSTHKTL--PALTQGSMIHVKGDL-VNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALY 287 (294)
T ss_pred CcEEEEchhccc--chHhHHHHHHhCCCc-CCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 889999999987 5666554 4444321 112223222 1223455666666666655543222234556667777777
Q ss_pred HHHHhc
Q 015768 301 IREALS 306 (400)
Q Consensus 301 l~~~L~ 306 (400)
+++.|+
T Consensus 288 ~r~~l~ 293 (294)
T cd00615 288 ARQEIN 293 (294)
T ss_pred HHHHHh
Confidence 777664
No 281
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=2.4e-21 Score=183.58 Aligned_cols=286 Identities=18% Similarity=0.168 Sum_probs=188.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSS 145 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~ 145 (400)
...+++.++++ .|. +..++++++++|+..++.++.+|||+|+++.+.|.+... .++..|++++.+ +.+
T Consensus 65 ~~~le~~lA~l----~g~--~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~v-d~~- 136 (427)
T PRK05994 65 NAVLEERVAAL----EGG--TAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWA-DAD- 136 (427)
T ss_pred HHHHHHHHHHH----hCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEE-CCC-
Confidence 34455555554 454 347888999999999999999999999999999987554 356789998888 532
Q ss_pred CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
|++.+++.+++++ ++|++++|+||+|.+.| +++|.++|+++|+++|+|+++..... ......+.++
T Consensus 137 -----d~~~l~~ai~~~t--klV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~----~~pl~~gaDi 202 (427)
T PRK05994 137 -----DPASFERAITPRT--KAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL----IRPIEHGADI 202 (427)
T ss_pred -----CHHHHHHhcCcCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc----CCccccCCcE
Confidence 7889999998765 99999999999999999 88999999999999999999974322 1223456779
Q ss_pred EEeccccccCCCcceeEEEEcc-CCc---------------HH-----HHHHHH----------HhhccCCcCccHHHHH
Q 015768 226 NLFSFSKAYGMMGWRVGYIAYP-SEV---------------EG-----FATQLL----------KVQDNIPICASIISQH 274 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~G~i~~~-~~~---------------~~-----~~~~l~----------~~~~~~~~~~~~~~~~ 274 (400)
++.|++|++|.+|-.+|.++.. ... ++ +.+.+. .........+++...+
T Consensus 203 vv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~ 282 (427)
T PRK05994 203 VVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAF 282 (427)
T ss_pred EEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHH
Confidence 9999999997555444543332 100 00 111100 0111223345666666
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHHHH
Q 015768 275 LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 275 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~~ 336 (400)
.+...|+. +..+.++..+++..+.+.|++++.+. +..| . .+-.+.+.+........++
T Consensus 283 l~~~~l~t----L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~ 358 (427)
T PRK05994 283 LILTGIET----LPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKL 358 (427)
T ss_pred HHHcCccc----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHH
Confidence 55555554 67888899999999999999887632 2211 1 2345555664211112233
Q ss_pred HHHHHHhcCeEEeCCCccC-----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 337 VRWLAHRHGVVVIPGGACG-----------------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
++.| +=..+.+.-|.... .++.+|+|++. |+.+++++.|.+||.+
T Consensus 359 ~~~l-~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl---E~~~dli~dl~~Al~~ 426 (427)
T PRK05994 359 VSSL-KLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI---EDVDDIIADLEQALAK 426 (427)
T ss_pred HHhC-CcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHhh
Confidence 3322 11122222232210 13579999997 6677788888888763
No 282
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.90 E-value=9.1e-21 Score=179.92 Aligned_cols=323 Identities=15% Similarity=0.151 Sum_probs=213.0
Q ss_pred EEcCCCCCCCCC-----cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 33 VSLAQGVVYWQP-----PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 33 i~~~~~~~~~~~-----~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
..|+.|.++.+. +.+-++++.+.+.... ..+ .....++++++++++ |. +++++++|+|+++..++.
T Consensus 26 ~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~-~~~--G~~~~~fe~~lA~~~----g~--~~~v~~~sGt~al~~aL~ 96 (438)
T PRK15407 26 KPFVPGKSPIPPSGKVIDAKELQNLVDASLDFW-LTT--GRFNDAFEKKLAEFL----GV--RYALLVNSGSSANLLAFS 96 (438)
T ss_pred ccccCCCCCCCcCccCCCHHHHHHHHHHHHhCc-ccC--ChhHHHHHHHHHHHh----CC--CeEEEECCHHHHHHHHHH
Confidence 345666654432 2344455555554432 122 233577888888887 43 468999999999999998
Q ss_pred Hh---------cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768 108 TL---------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (400)
Q Consensus 108 ~l---------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG 178 (400)
++ .+|||+|+++.++|.++...+...|++++.+ +.+.+.+.+|++.+++.+++++ ++|++++ ++|
T Consensus 97 al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~v-dvd~~~~~id~~~le~~i~~~t--kaVi~~~---~~G 170 (438)
T PRK15407 97 ALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFV-DVELPTYNIDASLLEAAVSPKT--KAIMIAH---TLG 170 (438)
T ss_pred HHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHHcCcCC--eEEEEeC---CCC
Confidence 76 3789999999999999999999999999999 8877677889999999998766 9999875 356
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHH
Q 015768 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
...+ +.+|.++|++||+++|+|++++.+..-........+ ++.++|| +|.+. .| ..|++++++ +++.++
T Consensus 171 ~p~d---l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g--d~~~fSf~~~k~~~-~g-eGG~l~t~d--~~l~~~ 241 (438)
T PRK15407 171 NPFD---LAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG--DIATLSFYPAHHIT-MG-EGGAVFTND--PLLKKI 241 (438)
T ss_pred Chhh---HHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC--ceEEEeCCCCCCcc-cc-CceEEEECC--HHHHHH
Confidence 6666 899999999999999999999866532222222222 3555566 56664 23 359999887 777776
Q ss_pred HHHhhcc---------------------------------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 015768 257 LLKVQDN---------------------------------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRN 297 (400)
Q Consensus 257 l~~~~~~---------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 297 (400)
++..+.. .++.++.+....+...|+ .+++..++-+++
T Consensus 242 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~----~l~~~~~~R~~~ 317 (438)
T PRK15407 242 IESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLE----KLPGFIEARKAN 317 (438)
T ss_pred HHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 6654321 111233333444344443 356777777788
Q ss_pred HHHHHHHhccCCC-Cccc-CCCC---ce-EEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCc--cC------------C
Q 015768 298 REIIREALSPLGE-GAVK-GGEG---AI-YLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGA--CG------------C 356 (400)
Q Consensus 298 ~~~l~~~L~~~~~-~~~~-~~~~---~~-~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~--~~------------~ 356 (400)
++++.+.|.+++. .... .+.+ .+ .+.+.++.. ..+.+++..+|. ++||.+..... .. .
T Consensus 318 a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Rd~l~~~L~-~~GI~~~~~~~~~~~~~p~~~~~~~~~~ 396 (438)
T PRK15407 318 FAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAGFTRVELVKYLE-ENKIGTRLLFAGNLTRQPYFKGVKYRVV 396 (438)
T ss_pred HHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCCCCHHHHHHHHH-HCCCCccccCCCccccChhhhhcCCCCC
Confidence 8888888987753 2221 1111 12 233444431 235788888875 78997653221 00 0
Q ss_pred ----------CCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 357 ----------RGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 357 ----------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
...+-+-++. +++++++..++.|++++.
T Consensus 397 ~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 397 GELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 1234444444 789999999999998874
No 283
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.90 E-value=3.8e-21 Score=175.62 Aligned_cols=287 Identities=24% Similarity=0.231 Sum_probs=205.4
Q ss_pred HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCC
Q 015768 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSK 146 (400)
Q Consensus 71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~ 146 (400)
...++.+.+.+..+.| .++.+.+++|+.|+..++.++.++||+|++....|.+.... ++..|+++.++++.
T Consensus 62 nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~--- 136 (396)
T COG0626 62 NPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG--- 136 (396)
T ss_pred CccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC---
Confidence 3444555555554444 57789999999999999999999999999999999887644 46788998887221
Q ss_pred CCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768 147 TLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 147 ~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
+.+.+++.+. +++ ++|+++.|+||+..+.| |.+|+++++++|+++++|+++....+. .+...+.+|
T Consensus 137 ----~~~~~~~~~~~~~t--k~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q----~PL~~GaDI 203 (396)
T COG0626 137 ----DDEALEAAIKEPNT--KLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ----RPLELGADI 203 (396)
T ss_pred ----ChHHHHHHhcccCc--eEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc----ChhhcCCCE
Confidence 3445565665 365 99999999999999999 999999999999999999999854443 234557889
Q ss_pred EEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768 226 NLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 226 ~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 303 (400)
++.|.+|.++. ..+=.|.+++++ +++.+.+..... .....+++...+.+.+.++. +.-+++++.+++..+.+
T Consensus 204 VvhSaTKyl~GHsDvl~G~v~~~~--~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT----L~~Rm~~~~~nA~~IA~ 277 (396)
T COG0626 204 VVHSATKYLGGHSDVLGGVVLTPN--EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT----LALRMERHNENALKIAE 277 (396)
T ss_pred EEEeccccccCCcceeeeEEecCh--HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHHHH
Confidence 99999999963 345568777675 667776643333 35566778888877777776 67888999999999999
Q ss_pred HhccCCCC-cccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----------
Q 015768 304 ALSPLGEG-AVKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------- 355 (400)
Q Consensus 304 ~L~~~~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----------- 355 (400)
.|++.+.+ ++..|. .|-.+.+.+... .+..++.+.| +-..+...-|....
T Consensus 278 ~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-~~~~~f~~~L-~l~~~a~SlGgveSLi~~pa~~th~ 355 (396)
T COG0626 278 FLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-EAAKKFLDSL-KLFKLAESLGGVESLISHPATMTHA 355 (396)
T ss_pred HHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-HHHHHHHHhC-CccEEeccCCCcccccccccccCcc
Confidence 99998763 233332 345566677642 1233344433 22233333333220
Q ss_pred ------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 356 ------------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 356 ------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++-+|+|++. |+.+++++.|++++...
T Consensus 356 ~~~~~~r~~~Gi~~~LvRlSVGl---Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 356 SIPLEERAKAGITDGLVRLSVGL---EDVEDLIADLEQALAKA 395 (396)
T ss_pred cCCHhHHHhcCCCCCeEEEEecC---CCHHHHHHHHHHHHHhh
Confidence 14689999997 77778888888888764
No 284
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=7.3e-21 Score=181.67 Aligned_cols=344 Identities=14% Similarity=0.089 Sum_probs=221.9
Q ss_pred hcCCCeEEcCCC-CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 27 RGAKNAVSLAQG-VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 27 ~~~~~~i~~~~~-~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
.+|+.++||..+ ...++ .+|++++++.+.+.+.... ...-..+...++++.|.+..+...+.++|++++++|++.
T Consensus 69 ~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~---~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~ 145 (459)
T PRK06082 69 VDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFS---PRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGM 145 (459)
T ss_pred CCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCc---cCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHH
Confidence 457889999743 23354 7899999999998763221 111123556677777776654334789999999999999
Q ss_pred HHHHhc--CCCCEEEEeCCCccchhH-HHHhcCc------------EEEEeccCCC--C-CCC-C------CHHHHHHhh
Q 015768 105 IVLTLC--DAGDSVVMFAPYYFNSYM-SFQMTGV------------THILVGPCSS--K-TLH-P------DADWLEKTL 159 (400)
Q Consensus 105 ~~~~l~--~~gd~vlv~~p~~~~~~~-~~~~~g~------------~~~~~~~~~~--~-~~~-~------~~e~l~~~l 159 (400)
+++... ....+|+....+|++... .+...|. .+..+ |... . .+. . .++.+++.+
T Consensus 146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i 224 (459)
T PRK06082 146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERI-PPAVSYRGAFPDADGSDVHYADYLEYVI 224 (459)
T ss_pred HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEe-CCCcccccccCChhHHHHHHHHHHHHHH
Confidence 998764 233689998888888653 3322221 11222 2110 0 010 0 135577777
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCC
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~ 237 (400)
.....+.+|+++..++..+...+.++++++.++|++||+++|+||++.++...|..+... .-..+++ +++|.+| .
T Consensus 225 ~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv--~~gKgl~-g 301 (459)
T PRK06082 225 EKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDIL--CIGKGLG-G 301 (459)
T ss_pred hcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEE--Eeccccc-C
Confidence 633346788877666665667899999999999999999999999999765444221111 1122344 4789997 6
Q ss_pred c-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCc
Q 015768 238 G-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGA 312 (400)
Q Consensus 238 g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~ 312 (400)
| +++|.++.+ +++...........+++.++++..++.+.|+.-++ .+..++.+++.++|++.|++ ++.+.
T Consensus 302 G~~P~~av~~~---~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~ 376 (459)
T PRK06082 302 GLVPIAAMITK---DKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQ--EGLLEKVKADSQFMRERLLEMKAKYPLIG 376 (459)
T ss_pred CCCcceEEEEc---HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCee
Confidence 6 589999988 56554332111125788899999888888875221 23455566666666666654 34333
Q ss_pred ccCCCCceEEEeeCCCCC----CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 313 VKGGEGAIYLWARLPEKH----LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~----~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
-+... |.++.+.+.... .+ ...+...++ ++||.+.+. ..+.+|+++.. +++++++++++++.+++.
T Consensus 377 ~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~----~~~~i~~~Ppl~it~~eid~~~~~l~~~l~ 450 (459)
T PRK06082 377 DVRGI-GLLWGVELVTDRHTKERAYDEAEAVLYRCL-NNGLSFKVS----QGNVIQLSPPLIITREELTQALAILEEAIA 450 (459)
T ss_pred eeeec-cceeEEEEccCccccCccHHHHHHHHHHHH-hCCCEEEec----CCCEEEEeCCCccCHHHHHHHHHHHHHHHH
Confidence 33444 555555553211 01 234555555 899999763 25789999876 799999999999999999
Q ss_pred HHhc
Q 015768 385 ELVK 388 (400)
Q Consensus 385 ~~~~ 388 (400)
++.+
T Consensus 451 ~~~~ 454 (459)
T PRK06082 451 KICQ 454 (459)
T ss_pred HHhh
Confidence 8744
No 285
>PRK07678 aminotransferase; Validated
Probab=99.90 E-value=8.4e-21 Score=181.22 Aligned_cols=345 Identities=15% Similarity=0.107 Sum_probs=220.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+..... ... ..+...++++.+.+..+. .+.++|++++++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~--~~~-~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e 119 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFP--LTQ-SHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANE 119 (451)
T ss_pred CCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccc--ccc-CCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHH
Confidence 4578899998775 3443 68999999999888642211 111 223445677777665432 358999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCCC-CCC-------CC---
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-TLH-------PD--- 151 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-~~~-------~~--- 151 (400)
.+++.... +| .+|+....+|++........ |. .+..+ |.++. ... .+
T Consensus 120 ~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (451)
T PRK07678 120 TAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHV-PPPDCYRMPGIESEDIYDLEC 198 (451)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEe-CCCccccccccCChHHHHHHH
Confidence 99998642 23 67999999999876443221 11 11222 21110 000 01
Q ss_pred HHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEE
Q 015768 152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVN 226 (400)
Q Consensus 152 ~e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~ 226 (400)
++.+++.+. ....+.+|+++..+...|.+ ++.++++++.++|++||+++|+||++.+|...|..+..... ..|++
T Consensus 199 ~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDiv 278 (451)
T PRK07678 199 VKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDII 278 (451)
T ss_pred HHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEE
Confidence 233566664 12346888888666666765 68889999999999999999999999877544422111111 22333
Q ss_pred EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
+++|.+| .| +++|.++.+ +++.+.+.. .....+++.|+++..++.+.|+..++ +...++.+++.+
T Consensus 279 --t~gK~lg-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~--~~~~~~~~~~g~ 350 (451)
T PRK07678 279 --TMAKGIT-SAYLPLSATAVK---KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN--ENLIERSAQLGE 350 (451)
T ss_pred --Eeecccc-cCCcceeEEEEc---HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence 6689997 66 699999999 788777753 23467888999999999999885221 123344444445
Q ss_pred HHHHHh----ccCCCCcccCCCCceEEEeeCCCCC-----CC---HHHHHHHHHHhcCeEEeCCCcc--CCCCeEEEEec
Q 015768 300 IIREAL----SPLGEGAVKGGEGAIYLWARLPEKH-----LD---DFEVVRWLAHRHGVVVIPGGAC--GCRGHLRISFG 365 (400)
Q Consensus 300 ~l~~~L----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~l~~~~gi~v~~g~~~--~~~~~iRi~~~ 365 (400)
+|++.| ++++.+.-+... |.++-+.+.... .+ ...+...++ ++||++.+.... ...+.+||++.
T Consensus 351 ~l~~~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~-~~Gv~~~~~g~~v~~~~~~lrl~Pp 428 (451)
T PRK07678 351 LLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACK-EKGLIIGKNGDTVAGYNNVLTLSPP 428 (451)
T ss_pred HHHHHHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHH-HCCcEEeecCccccCCCCEEEEECC
Confidence 554444 444543333344 455444542110 01 245666665 799999763221 23478999988
Q ss_pred c-CCHHHHHHHHHHHHHHHHHH
Q 015768 366 G-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 366 ~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
. +|++|+++++++|.+++.++
T Consensus 429 l~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 429 LVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CcCCHHHHHHHHHHHHHHHHhc
Confidence 7 89999999999999999764
No 286
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.90 E-value=7.7e-21 Score=181.21 Aligned_cols=345 Identities=12% Similarity=0.067 Sum_probs=224.0
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+...... ..-..+.+.++++.+.+..+..-+.++|++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~--~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve 128 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML--AGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVE 128 (453)
T ss_pred CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHH
Confidence 5578899998874 4454 789999999999876421111 0112345556777776654433368999999999999
Q ss_pred HHHHHhc-------CC-CCEEEEeCCCccchhHHHH-hcCc------------EEEEeccCCC-CCC--C--------CC
Q 015768 104 NIVLTLC-------DA-GDSVVMFAPYYFNSYMSFQ-MTGV------------THILVGPCSS-KTL--H--------PD 151 (400)
Q Consensus 104 ~~~~~l~-------~~-gd~vlv~~p~~~~~~~~~~-~~g~------------~~~~~~~~~~-~~~--~--------~~ 151 (400)
.+++... .+ ..+|+....+|++...... ..|- .+..+ |... .+. . -+
T Consensus 129 ~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 207 (453)
T PRK06943 129 IALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVV-ASPDARGARPGETAADVAARA 207 (453)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEE-CCCCccccccCCCHHHHHHHH
Confidence 9999862 12 3689999999988663221 1110 11222 2111 010 0 12
Q ss_pred HHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 152 ~e~l~~~l~-~~~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
++.+++.+. ....+.+|+++. .+...|. ..|.++++++.++|++||+++|.||++.++...|..+.....+...-+-
T Consensus 208 ~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDiv 287 (453)
T PRK06943 208 LADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFL 287 (453)
T ss_pred HHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeE
Confidence 467777775 223468888886 3666776 5788999999999999999999999998875544322111111112233
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
+++|.++ +| +++|.++.+ +++.+.+.. .....+++.++++..++.+.|+..++ ++..++.++..+++
T Consensus 288 t~gKgl~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~~~~~G~~l 361 (453)
T PRK06943 288 CLSKGIS-GGYLPLSLVLSR---DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE--DDVLARNARKSARL 361 (453)
T ss_pred eeehhhc-cCcccceEEEEc---HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence 5589997 78 599999998 677776642 12456888899999999998875221 23444555555666
Q ss_pred HHHhccC---CCCcccCCCCceEEEeeCCCCCC----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHH
Q 015768 302 REALSPL---GEGAVKGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK 373 (400)
Q Consensus 302 ~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~ 373 (400)
.+.|+++ +.+.-+... |.++-+.+..... ....+...++ ++||++.+. .+.+||++.. +|+++++
T Consensus 362 ~~~L~~l~~~~~v~~vrG~-Gl~~gvel~~~~~~~~~~~~~i~~~~~-~~Gll~~~~-----g~~l~~~Ppl~it~~eid 434 (453)
T PRK06943 362 RAALAPLAAHPQVRHLRQR-GTIFAFDVALDGDAARTFSRRFFEAAL-ERELLLRPI-----GTTVYLMPPYVLDDDEIA 434 (453)
T ss_pred HHHHHHHhcCCCEEeEecc-ccEEEEEEccCCCcchHHHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCcCCHHHHH
Confidence 6655543 332223344 5555556542111 1234566565 899999763 2469999776 7999999
Q ss_pred HHHHHHHHHHHHHh
Q 015768 374 AAADRLRRGLEELV 387 (400)
Q Consensus 374 ~~~~~l~~~l~~~~ 387 (400)
+++++|.+++.++.
T Consensus 435 ~~~~~l~~al~~~~ 448 (453)
T PRK06943 435 WLAERTRATLDATL 448 (453)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999874
No 287
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.90 E-value=3.4e-21 Score=178.84 Aligned_cols=315 Identities=14% Similarity=0.102 Sum_probs=221.5
Q ss_pred CCcHHHHHHHHHhhcCC---CCCCCCCCCC---cHHHHHHHHHHHHhhcCCC-CCcEEEe-CChHHHHHHHHHHhcCCCC
Q 015768 43 QPPKMAMEKVKELVWDP---SISKYGADEG---LPELRDALVKKLNQENKLY-KSSVMVT-AGANQAFVNIVLTLCDAGD 114 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~---~~~~y~~~~g---~~~~~~~~a~~l~~~~~~~-~~~i~~~-~g~t~a~~~~~~~l~~~gd 114 (400)
..|++|++++...+.+. ..+.+....- ..++.+.+.+.+++.++.+ ..+++++ +++|.+++.++..+..+|+
T Consensus 13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~ 92 (360)
T PRK05355 13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGK 92 (360)
T ss_pred CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCC
Confidence 46899999998886431 1222222222 3367777778888888874 3456555 7799999999999999999
Q ss_pred EEEEeCCCccch--hHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH-hhccCCCCeEEEEeCCCCCCccCC-CHHHHHHH
Q 015768 115 SVVMFAPYYFNS--YMSFQMTGVTHILVGPCSS-KTLHPDADWLEK-TLETKPTPKLVSVVNPGNPSGTYI-PERLLKRI 189 (400)
Q Consensus 115 ~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~-~l~~~~~~~~v~l~~p~nptG~~~-~~~~l~~i 189 (400)
++++...+.++. .+.++..|.. ..+ ..++ ++. .+..++++ .++++ +++|.+++..+.||+.. + +.+|
T Consensus 93 ~~l~i~~G~fg~r~~~~a~~~g~~-~~~-~~~~~~g~-~~~~~~~~~~l~~~--~~~V~~th~eTstGv~~~~---i~~i 164 (360)
T PRK05355 93 KADYVDTGSWSKKAIKEAKKYGEV-NVA-ASSEDDGF-TYIPPLDEWQLSDD--AAYVHYTSNETIDGTEFHE---LPDT 164 (360)
T ss_pred eEEEEECCHHHHHHHHHHHHhCCc-eEE-ecccccCC-CCCCChhhccCCCC--CCEEEEccCCCcceEecCc---cccc
Confidence 998887777664 4677888865 444 4333 443 34444444 66554 59999999999999998 5 5555
Q ss_pred HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh---------
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV--------- 260 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~--------- 260 (400)
+|+++++|.+++.+ +.+......+ ++++|.+|++|.+| +|.++.+ +++.+++...
T Consensus 165 ------~g~l~vVDavss~g---~~~idv~~~d--~~~~ssqK~lgP~G--lg~l~~s---~~~l~~~~~~~~~~~~~~~ 228 (360)
T PRK05355 165 ------GDVPLVADMSSDIL---SRPIDVSKFG--LIYAGAQKNIGPAG--LTIVIVR---EDLLGRALPSIPSMLDYKT 228 (360)
T ss_pred ------CCCcEEEEcCcccc---CccCCHHHcc--EEEEeccccccCCc--eEEEEEC---HHHHhhcccCCChHHHHHH
Confidence 79999999999843 3344333333 88999999998555 6888888 5666554431
Q ss_pred ---hccCCcCccHHHHHHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHHhccCCCCcc-cC--CCCceEEEeeCCCCCCC
Q 015768 261 ---QDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAV-KG--GEGAIYLWARLPEKHLD 332 (400)
Q Consensus 261 ---~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 332 (400)
.....+++|....+++..+|+.-. + .++++.++++++.+++++.|++++.... .. ..+...+.+.++... +
T Consensus 229 ~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~-~ 307 (360)
T PRK05355 229 HADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEE-L 307 (360)
T ss_pred HHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChH-H
Confidence 112356788888888888888522 3 4788899999999999999999885322 11 123355667776542 3
Q ss_pred HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
..++...+. ++|+.+.+|.. ..+.+|+|+.. +|.+|++.+++.|+++++.
T Consensus 308 ~~~~~~~~~-~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 308 DKKFLAEAK-AAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred HHHHHHHHH-HCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 345555554 78999866652 35789999888 9999999999999997754
No 288
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.90 E-value=8e-21 Score=182.70 Aligned_cols=346 Identities=13% Similarity=0.091 Sum_probs=223.7
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc-CCCCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~-~~~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..|. ..++ .+|++++++.+.+.+..... .......+...++++.|.+.+ +.+.+.++|+++|++|+
T Consensus 86 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~-~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~ 164 (504)
T PLN02760 86 INGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYH-SFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN 164 (504)
T ss_pred CCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhcccee-cccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence 4678999998864 4443 78999999999988643210 001123455566777766553 22346799999999999
Q ss_pred HHHHHHhc------C-CC-CEEEEeCCCccchhH-HHHhcCcE------------EEEeccCCC-CCC-----------C
Q 015768 103 VNIVLTLC------D-AG-DSVVMFAPYYFNSYM-SFQMTGVT------------HILVGPCSS-KTL-----------H 149 (400)
Q Consensus 103 ~~~~~~l~------~-~g-d~vlv~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~-~~~-----------~ 149 (400)
+.+++... . ++ .+|+....+|++... .+...|.. +..+ +.+. ... .
T Consensus 165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~ 243 (504)
T PLN02760 165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHT-DCPHYWRFHLPGETEEEFST 243 (504)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEe-CCCcccccCCCCCcHHHHHH
Confidence 99999874 1 23 678999988888653 22222221 1111 1110 000 0
Q ss_pred CCHHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 150 PDADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 150 ~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
...+++++.+. ....+.+|+++..+...|.+ .|.+++++|.++|++||+++|+||++.+|...|........+...-
T Consensus 244 ~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PD 323 (504)
T PLN02760 244 RLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPD 323 (504)
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCc
Confidence 01245666664 12336778777666667765 5788999999999999999999999977754443221111122222
Q ss_pred EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298 (400)
Q Consensus 227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (400)
+.+++|.+| .| +++|.++++ +++.+.+.. .....+++.++++..++.+.|+..++ ++..++.+++.
T Consensus 324 ivtlgK~lg-gG~~PigAv~~~---~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~--~~l~~~~~~~g 397 (504)
T PLN02760 324 LVSLAKALS-SAYMPIGAVLVS---PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE--RNIPEHVNKIA 397 (504)
T ss_pred EEEeccccc-CCccccceEeec---HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence 557789997 56 589999988 788777653 23456888899999999999885221 24455666666
Q ss_pred HHHHHHhccC---CCCcccCCCCceEEEeeCCCCCC--C--------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEec
Q 015768 299 EIIREALSPL---GEGAVKGGEGAIYLWARLPEKHL--D--------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 365 (400)
Q Consensus 299 ~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~ 365 (400)
++|++.|+++ +.+.-+... |.++-+.+..... + ...+...++ ++||++.+. .+.+|+++.
T Consensus 398 ~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~lrl~Pp 470 (504)
T PLN02760 398 PRFQDGIKAFSGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECK-KRGMLVRVA-----GDNIMMSPP 470 (504)
T ss_pred HHHHHHHHHHhcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHHHHH-hCCcEEEec-----CCEEEEECC
Confidence 6666666554 322223333 5555555532110 0 234556665 799999763 257999987
Q ss_pred c-CCHHHHHHHHHHHHHHHHHHh
Q 015768 366 G-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 366 ~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
. +|++|+++++++|.+++.++.
T Consensus 471 l~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 471 LIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 6 799999999999999998874
No 289
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.90 E-value=4.9e-21 Score=181.26 Aligned_cols=342 Identities=13% Similarity=0.072 Sum_probs=224.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+...... ..-..+.+..+++.+.+......+.++|++++++|++
T Consensus 41 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve 118 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF--GGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVE 118 (429)
T ss_pred CCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc--cccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHH
Confidence 5678899998764 4443 689999999998876321111 0112344456666666554323478999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhH-HHHhcCc-------------EEEEeccCCCCCC-----CCCHHHHH
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYM-SFQMTGV-------------THILVGPCSSKTL-----HPDADWLE 156 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~-~~~~~g~-------------~~~~~~~~~~~~~-----~~~~e~l~ 156 (400)
.+++.... +| .+|+....+|++... .+...+. .+..+ |.....+ .-+++.++
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~l~~l~ 197 (429)
T PRK06173 119 VAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFL-PQPSIKFGEEWNDEAIEPLQ 197 (429)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEe-CCCCcccchhHHHHHHHHHH
Confidence 99987642 33 679999999988532 2211110 11122 2211100 01356677
Q ss_pred Hhhc-cCCCCeEEEEeCC-CCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccc
Q 015768 157 KTLE-TKPTPKLVSVVNP-GNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFS 231 (400)
Q Consensus 157 ~~l~-~~~~~~~v~l~~p-~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~s 231 (400)
+.+. ....+.+|+++.. +...|.. +|.++++++.++|++||+++|+||++.++...|..+... .-..+++ +++
T Consensus 198 ~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--~~g 275 (429)
T PRK06173 198 DLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIM--CIG 275 (429)
T ss_pred HHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEE--Eee
Confidence 7775 2234688888864 7777775 788999999999999999999999997664434321111 1123344 479
Q ss_pred cccCCCc-ceeEEEEccCCcHHHHHHHHH-----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 232 KAYGMMG-WRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 232 K~~g~~g-~~~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
|.++ +| +.++.++.+ +++.+.+.. +....++..+++...++.+.|+...+ ....++.+++.++|++.|
T Consensus 276 K~l~-gG~~p~~a~~~~---~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~L 349 (429)
T PRK06173 276 KALT-GGYLTLSATITT---EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLE--SPWQQNIQRIEAQLKQEL 349 (429)
T ss_pred hhhh-CCccccceEEec---HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence 9996 77 478888888 677777642 23345677889999998888875221 134566677777777777
Q ss_pred ccC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 306 SPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 306 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+++ +.+.-+... +.+.-+.+.... +...+...+. ++||++.+. .+.+||.+.. .+++++++++++|.+
T Consensus 350 ~~~~~~~~v~~vRg~-Gl~~~iel~~~~-~~~~i~~~l~-e~Gi~v~~~-----g~~l~~~Ppl~it~~ei~~~~~~l~~ 421 (429)
T PRK06173 350 APAAEFDSVAEVRVL-GAIGVVEMKEPV-NMATLQPRFV-EHGIWVRPF-----GKLVYIMPPFIISPDELSQLTSGLLR 421 (429)
T ss_pred HHhhcCCCeeeeecc-ceEEEEEeCCcc-cHHHHHHHHH-HCCeEEEec-----CCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 654 211112233 666666665321 3566777665 789999763 2589999887 899999999999999
Q ss_pred HHHHHh
Q 015768 382 GLEELV 387 (400)
Q Consensus 382 ~l~~~~ 387 (400)
++.+..
T Consensus 422 ~l~~~~ 427 (429)
T PRK06173 422 VLKQEY 427 (429)
T ss_pred HHHHHh
Confidence 998754
No 290
>PRK05965 hypothetical protein; Provisional
Probab=99.90 E-value=9.4e-21 Score=181.08 Aligned_cols=348 Identities=16% Similarity=0.131 Sum_probs=225.3
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++++++.+.+.+..... .......+.+..+++.|.+......+.++|+++|++|++
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve 121 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYAT-GYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD 121 (459)
T ss_pred CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence 5678999998775 3443 68999999999988632110 000112234456666666554323468999999999999
Q ss_pred HHHHHhcC-------C-CCEEEEeCCCccchhHHH-HhcCc------------EEEEeccCCC--C-CCCCC--------
Q 015768 104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSF-QMTGV------------THILVGPCSS--K-TLHPD-------- 151 (400)
Q Consensus 104 ~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~-~~~g~------------~~~~~~~~~~--~-~~~~~-------- 151 (400)
.+++.... + ..+|+....+|++..... ...+. .+..+ |... . .+..+
T Consensus 122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK05965 122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKI-PSPYPYRNPVGDDPQAIIAAS 200 (459)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEc-CCCcccccccCCChHHHHHHH
Confidence 99987641 2 267999999998875322 11111 11222 2110 0 00112
Q ss_pred HHHHHHhhcc--CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 152 ADWLEKTLET--KPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 152 ~e~l~~~l~~--~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
++.+++.+.. ...+.+|+++..+...|. .+|.++++++.++|++||+++|.||++.+|...|..+.....+...-+-
T Consensus 201 ~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 280 (459)
T PRK05965 201 VAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM 280 (459)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE
Confidence 3567777752 134688888876776776 4688899999999999999999999999886544322221122222233
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+++|.+| .| +++|.++.+ +++.+.+.. .....+++.++++..++.+.|+..++ ++..++.++..++
T Consensus 281 ~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~g~~ 354 (459)
T PRK05965 281 TVAKGLT-SGYVPMGAVLMS---DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHE--GGLLANGQKAGPR 354 (459)
T ss_pred Eechhhc-cCCcceeEEEEc---HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence 5689997 78 599999998 788776642 23456888999999999988875221 2344556666666
Q ss_pred HHHHhccC---CCCcccCCCCceEEEeeCCCCC--C---C-----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768 301 IREALSPL---GEGAVKGGEGAIYLWARLPEKH--L---D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 366 (400)
Q Consensus 301 l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~--~---~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~- 366 (400)
|.+.|+++ +.+.-+... |.++-+.+.... . + ...+...++ ++||++.+. +.+.+|+.+..
T Consensus 355 l~~~l~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gll~~~~----g~~~i~~~PpL~ 428 (459)
T PRK05965 355 FAAGLDALRAHPLVGDVRGR-GLLGALELVADKATKTPFDAALDPADRIFDRAY-ANGLVFRAF----GDGVLGFAPALC 428 (459)
T ss_pred HHHHHHhhccCCCEEEEeec-ceEEEEEEeccccccCCCCchhHHHHHHHHHHH-hCCeEEEec----CCcEEEEECCCc
Confidence 66666553 322223333 555555553210 0 1 234555554 899999753 24679999876
Q ss_pred CCHHHHHHHHHHHHHHHHHHhc
Q 015768 367 LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 367 ~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++++++++++++|.+++.++.+
T Consensus 429 it~~ei~~~~~~l~~~l~~~~~ 450 (459)
T PRK05965 429 CTEGEFDLIFERTRKTLDDVLA 450 (459)
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999998744
No 291
>PRK06105 aminotransferase; Provisional
Probab=99.90 E-value=9.3e-21 Score=181.16 Aligned_cols=347 Identities=14% Similarity=0.085 Sum_probs=224.1
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++++++.+.+.+.... ........+.+.++++.|.+....+.+.++|++++++|++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~-~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve 123 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFY-HTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND 123 (460)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCe-ecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 5678999998875 4453 7899999999998864211 0011112345556777776665433478999999999999
Q ss_pred HHHHHhc------C-CC-CEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCC-CCC-----------CC
Q 015768 104 NIVLTLC------D-AG-DSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSS-KTL-----------HP 150 (400)
Q Consensus 104 ~~~~~l~------~-~g-d~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~-~~~-----------~~ 150 (400)
.+++... . +| .+|+....+|++....... .+. .+..+ |... ..+ ..
T Consensus 124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06105 124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHT-GCPHYYRFGLPGESEEAFATR 202 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEc-CCCcccccccCCCChHHHHHH
Confidence 9999853 1 22 5788888999886633211 111 11111 1110 000 00
Q ss_pred CHHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 151 DADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 151 ~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
.++++++.+. ....+.+|+++..+...|.. .|.++++++.++|++||+++|+||++.++...|..+.....+...-+
T Consensus 203 ~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi 282 (460)
T PRK06105 203 LANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDI 282 (460)
T ss_pred HHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCe
Confidence 1356777764 22346888888667667765 68999999999999999999999999776543322211111222224
Q ss_pred eccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
.+++|.+| .| +++|.++.+ +++.+.+... ....+++.|+++..++.+.|+.-++ ++..++.+++.+
T Consensus 283 ~~~gK~lg-gG~~P~~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~--~~l~~~v~~~g~ 356 (460)
T PRK06105 283 LVMSKQLS-SSYQPLSAVLMN---EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE--RDLVGNAAERGA 356 (460)
T ss_pred eeeecccc-cCcccceEEEEc---HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence 47789997 56 689999998 7777766532 2346788899999998888875221 244555666666
Q ss_pred HHHHHhccC---CCCcccCCCCceEEEeeCCCCC------CC----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768 300 IIREALSPL---GEGAVKGGEGAIYLWARLPEKH------LD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366 (400)
Q Consensus 300 ~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~ 366 (400)
+|++.|+++ +.+..+... |.+.-+.+.... .. ...+...++ ++||.+.+. .+.+|+++..
T Consensus 357 ~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~-~~Gvl~~~~-----g~~i~l~Ppl 429 (460)
T PRK06105 357 RLQARLRALADHPLVGEVRGV-GLIAAVELVADKATKTPFEPPGKVGARANAAAH-EHGVISRAM-----GDTLAFCPPL 429 (460)
T ss_pred HHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccCCCCCchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEECCC
Confidence 666666554 332233344 555555542110 00 234665554 899999763 3689999887
Q ss_pred -CCHHHHHHHHHHHHHHHHHHhc
Q 015768 367 -LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 367 -~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+++|+++++++|.++++++..
T Consensus 430 ~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 430 IITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999988754
No 292
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.90 E-value=4e-21 Score=168.76 Aligned_cols=337 Identities=16% Similarity=0.128 Sum_probs=243.6
Q ss_pred CCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 30 KNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 30 ~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
+++--+++++ ..+..+|+|++|+.+.+++...+.-+ ...|.......+.+.|+.++. .+.-++.++..-|+...+
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq--K~aALlFsSCfVANDstL 248 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ--KEAALLFSSCFVANDSTL 248 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc--CcceeeeeeeeeccchHH
Confidence 5666666665 66678999999999999874322111 223444334444444444433 344455555667888888
Q ss_pred HHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCC
Q 015768 107 LTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 107 ~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~ 182 (400)
..|.+ ||=.|+-.+..|.+....++..++.-..+ .. -|+++|+++|+ +...||+|.++..+..+|.+.|
T Consensus 249 ftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IF-rH------ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp 321 (570)
T KOG1360|consen 249 FTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIF-RH------NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP 321 (570)
T ss_pred HHHHHHCCCcEEeccccchHHHHHHhhhcCCcceee-cc------CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC
Confidence 77753 77788888888888888889888865555 22 27889999887 4445799999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCc-----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
|++|++++++||.+.++||++.-+.|+.... .......+++.+++.|+||+-| |||... ..+++.+
T Consensus 322 ---leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat---~~LvDmi 392 (570)
T KOG1360|consen 322 ---LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT---RKLVDMI 392 (570)
T ss_pred ---HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhh---hhHHHHH
Confidence 9999999999999999999999877764321 1223456789999999998777 999988 6889999
Q ss_pred HHhhccCCc--CccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768 258 LKVQDNIPI--CASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 258 ~~~~~~~~~--~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (400)
+.+...+-| +.++.....+..+++.. .+.....+++.+++..++++.|.++|. .+.+.. +..+-+++.... -..
T Consensus 393 RSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~Gi-PVi~~p-SHIiPv~vgda~-l~~ 469 (570)
T KOG1360|consen 393 RSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGI-PVIPNP-SHIIPVRVGDAA-LAK 469 (570)
T ss_pred HHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCC-cccCCC-cceeeeeccCHH-HHH
Confidence 887765444 45566565555555531 122367778889999999999999987 555443 566666665432 356
Q ss_pred HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
++...|+.++||++-.-.++. +...+||++.- .|++..+.+++.|..++.++.
T Consensus 470 ~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 470 QASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred HHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 788889999999997665553 45689998665 689999999999999998763
No 293
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.90 E-value=2.4e-21 Score=181.01 Aligned_cols=308 Identities=20% Similarity=0.227 Sum_probs=214.7
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~ 123 (400)
..+.++++.+.+.++....+ .....++++++++++ | .++++.++++|.|+..++.++ .++||+|+++..++
T Consensus 4 ~~e~~~~v~~~l~s~~~~~~--g~~~~~fE~~~a~~~----g--~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~ 75 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLSTY--GPYVEEFEKEFAEYF----G--VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTF 75 (363)
T ss_dssp HHHHHHHHHHHHHHTCCSSS--SHHHHHHHHHHHHHH----T--SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-
T ss_pred CHHHHHHHHHHHHhCCccCC--CHHHHHHHHHHHHHh----C--CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcc
Confidence 35677788888877643332 344677888888887 4 678999999999999999998 48999999999999
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
.+...++...|++++++ +++++.+.+|++.+++.+++++ ++|+++ +..|...+ +.+|.++|++||+++|+|
T Consensus 76 ~~~~~ai~~~G~~pv~~-Di~~~~~~id~~~~~~~i~~~t--~ai~~~---h~~G~~~d---~~~i~~~~~~~~i~lIeD 146 (363)
T PF01041_consen 76 PATASAILWAGAEPVFV-DIDPETLNIDPEALEKAITPKT--KAILVV---HLFGNPAD---MDAIRAIARKHGIPLIED 146 (363)
T ss_dssp THHHHHHHHTT-EEEEE--BETTTSSB-HHHHHHHHHTTE--EEEEEE----GGGB------HHHHHHHHHHTT-EEEEE
T ss_pred hHHHHHHHHhccEEEEE-eccCCcCCcCHHHHHHHhccCc--cEEEEe---cCCCCccc---HHHHHHHHHHcCCcEEEc
Confidence 99999999999999999 9998999999999999999887 999866 45677777 999999999999999999
Q ss_pred ccccccccCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc-----------------C
Q 015768 204 NTYEYFMYDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-----------------I 264 (400)
Q Consensus 204 ~a~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~-----------------~ 264 (400)
.+++.+..-........++ +.++|| +|.+. ....|++++++ +++.++++.++.. .
T Consensus 147 ~a~a~g~~~~g~~~G~~gd--~~~fSf~~~K~i~--~geGG~v~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 220 (363)
T PF01041_consen 147 AAQAFGARYKGRPVGSFGD--IAIFSFHPTKIIT--TGEGGAVVTND--PELAERARALRNHGRSRDAFRRYRHELPPGY 220 (363)
T ss_dssp -TTTTT-EETTEETTSSSS--EEEEESSTTSSS---SSS-EEEEEST--HHHHHHHHHHTBTTEETSECSTTEESSSS--
T ss_pred cccccCceeCCEeccCCCC--ceEecCCCCCCCc--CCCCeeEEecH--HHHHHHhhhhhccCcCccccccccccccCCc
Confidence 9999765422222222333 555565 68874 33458998887 7888888775532 2
Q ss_pred CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCC-----ceEEEeeCCCCC-CCHHHHH
Q 015768 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG-----AIYLWARLPEKH-LDDFEVV 337 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~-----~~~~~~~~~~~~-~~~~~~~ 337 (400)
.+.++.+....+...|+. +++..++-+++.+.+.+.|.+++.+... .+.. .+.+.+.++... .+.+++.
T Consensus 221 n~rm~~~~AAigl~QL~~----L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~ 296 (363)
T PF01041_consen 221 NFRMSELQAAIGLAQLKR----LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELV 296 (363)
T ss_dssp B-B-BHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHH
T ss_pred ccccHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHH
Confidence 234666666666666665 6777777788889999999998764222 1111 122344555321 2577888
Q ss_pred HHHHHhcCeEEeCCCc-c-C------C----------------CCeEEEEecc-CCHHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGA-C-G------C----------------RGHLRISFGG-LVEDDCKAAADRLR 380 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~-~-~------~----------------~~~iRi~~~~-~~~~~~~~~~~~l~ 380 (400)
+.|. +.||.+.+... + + . ...|.+-++. ++.++++..++.|+
T Consensus 297 ~~L~-~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 297 EALR-ARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHH-HTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHHH-HCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 8775 78999987552 1 0 0 1256676665 88999888888764
No 294
>PLN02880 tyrosine decarboxylase
Probab=99.90 E-value=1.1e-20 Score=181.41 Aligned_cols=337 Identities=12% Similarity=0.075 Sum_probs=233.9
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-------cEEEeCChHHHHHHHHHHhcC-----
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-------SVMVTAGANQAFVNIVLTLCD----- 111 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-------~i~~~~g~t~a~~~~~~~l~~----- 111 (400)
.++.++..+.....++....|...+....+++.+.+|+.+.+|.+.+ .-++|+|+|+++..++.+.++
T Consensus 94 ~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~ 173 (490)
T PLN02880 94 SVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRK 173 (490)
T ss_pred cHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHH
Confidence 34555555554444544555656677889999999999999998753 478899999999888877542
Q ss_pred ------CCCEEEEeCCCccchhHHHHhcCcE---EEEeccCCC-CCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCC
Q 015768 112 ------AGDSVVMFAPYYFNSYMSFQMTGVT---HILVGPCSS-KTLHPDADWLEKTLET----KPTPKLVSVVNPGNPS 177 (400)
Q Consensus 112 ------~gd~vlv~~p~~~~~~~~~~~~g~~---~~~~~~~~~-~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~npt 177 (400)
+.-.|++++-+|+++..+++.+|+. ++.| |.++ +++.+|++.|++.+.. +..|-+|+.+..+..+
T Consensus 174 ~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V-p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~ 252 (490)
T PLN02880 174 VGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL-KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSS 252 (490)
T ss_pred hcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe-ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcC
Confidence 1125667888999999999999983 6778 8875 3468999999999862 2235666767788999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccC-CCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
|.+.| +++|+++|++||+|+++|.+|+.+......+. ... ...+-+..++||+++ .+..+|.+..++. ..+.
T Consensus 253 GaiDp---l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~-~~l~ 327 (490)
T PLN02880 253 TAVDP---LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDR-NALI 327 (490)
T ss_pred cccCc---HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcC-CCccEEEEEEeCH-HHHH
Confidence 99999 99999999999999999999997754322211 111 245677889999995 6788999988852 2232
Q ss_pred HHHHHhhc---c-----------CCcCc------cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 255 TQLLKVQD---N-----------IPICA------SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 255 ~~l~~~~~---~-----------~~~~~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
+.+..-.. . ..++. ..+..++.... .|.+.+.++.++..++++++.+.|++.+.+++.
T Consensus 328 ~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~--~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~ 405 (490)
T PLN02880 328 QSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRL--YGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVV 405 (490)
T ss_pred HHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 32221100 0 00010 12222222222 256777888888889999999999988776766
Q ss_pred CCCCceEEEeeCCCCCCCH-------HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEKHLDD-------FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~ 385 (400)
.+.....++++++....+. .++.++|.++..+.+.+ ..+.+..++|++++. +++++++.+++.|.+..++
T Consensus 406 ~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 406 TPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred cCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 6554667777775422121 34666666555666654 334457799999887 5679999999999999888
Q ss_pred Hhcc
Q 015768 386 LVKD 389 (400)
Q Consensus 386 ~~~~ 389 (400)
+..+
T Consensus 485 ~~~~ 488 (490)
T PLN02880 485 LLGK 488 (490)
T ss_pred HHHh
Confidence 7653
No 295
>PRK06917 hypothetical protein; Provisional
Probab=99.90 E-value=2.3e-20 Score=177.81 Aligned_cols=352 Identities=13% Similarity=0.099 Sum_probs=225.1
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|+|.+++.+.+.+... .+... -..+.+.++++.|.+......+.++|++++++|++
T Consensus 28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~-~~~~~-~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve 105 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSF-VYRSQ-FTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANE 105 (447)
T ss_pred CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcC-ccccc-cCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHH
Confidence 5688999998875 4454 689999999999987421 11111 12345566777776654323368999999999999
Q ss_pred HHHHHhc-------CCC-CEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCC--C-CCC--------CC
Q 015768 104 NIVLTLC-------DAG-DSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSS--K-TLH--------PD 151 (400)
Q Consensus 104 ~~~~~l~-------~~g-d~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~--~-~~~--------~~ 151 (400)
.+++... .+| .+|+....+|++....... .+. .+..+ |... . .+. -+
T Consensus 106 ~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 184 (447)
T PRK06917 106 TAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTI-SAPYCYRCPVQKVYPTCQLAC 184 (447)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEe-CCCcccccccCCChHHHHHHH
Confidence 9999872 133 6899999999997744322 221 11112 1110 0 000 02
Q ss_pred HHHHHHhhccC--CCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 152 ADWLEKTLETK--PTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 152 ~e~l~~~l~~~--~~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
++.+++.++.. ..+.+|+++..+. ..|. ..+.+++++|.++|++||+++|+||++.+|...+........+...-+
T Consensus 185 ~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi 264 (447)
T PRK06917 185 ATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI 264 (447)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE
Confidence 45667777522 2468888885554 4455 568999999999999999999999999876443322211111111113
Q ss_pred eccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 228 ~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
.+++|.+| .|. ++|.++.+ +++.+.+... ....+++.++++..++.+.|+.-++ ....++.+++.++|+
T Consensus 265 ~~~gK~l~-~G~~Pi~a~~~~---~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~ 338 (447)
T PRK06917 265 MTLGKGLG-AGYTPIAATVVS---DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK--HNLPEKAAEKGEYLI 338 (447)
T ss_pred EEeeehhc-cCCcceEEEEEc---HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHH
Confidence 46689997 775 89999998 7777766532 2345788899999998888875211 234455566666666
Q ss_pred HHhcc----CCCCcccCCCCceEEEeeCCCC------CC----CHHHHHHHHHHhcCeEEeCCCc-c--CCCCeEEEEec
Q 015768 303 EALSP----LGEGAVKGGEGAIYLWARLPEK------HL----DDFEVVRWLAHRHGVVVIPGGA-C--GCRGHLRISFG 365 (400)
Q Consensus 303 ~~L~~----~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~l~~~~gi~v~~g~~-~--~~~~~iRi~~~ 365 (400)
+.|++ .+.+.-+... |.++.+.+... .. ....+...++ ++||++.+... . ...+.+|+++.
T Consensus 339 ~~L~~l~~~~~~i~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~~~~g~~~~~i~l~Pp 416 (447)
T PRK06917 339 KGLQKVQQQSTIIGDVRGK-GLLIGVEFVADKKTKQPFSKSQAVASELISVAA-KNGLLLYPAVAGQDGKEGDAVIIAPP 416 (447)
T ss_pred HHHHHHHhcCCCEEEEeec-ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHH-hCCcEEEecccccCCCCCCEEEEECC
Confidence 65554 3332233344 55555554211 00 1344566665 79999987421 1 12478999988
Q ss_pred c-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 366 G-LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 366 ~-~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
. +|++|++.++++|.++++++.++
T Consensus 417 l~it~~eid~~~~~l~~~l~~~~~~ 441 (447)
T PRK06917 417 MTITYSELDELLSIFAKSVEEMMQK 441 (447)
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6 79999999999999999998654
No 296
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.90 E-value=9.6e-21 Score=175.08 Aligned_cols=327 Identities=11% Similarity=0.100 Sum_probs=215.9
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++++++.+.+.+.... +.. -..+...++++.+.+..+ .+.+++++++++|++
T Consensus 21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~--~~~-~~~~~~~~la~~l~~~~~--~~~v~~~~SGseA~e 95 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVA--GPM-FEHEEKEEMLEELSKWVN--YEYVYMGNSGTEAVE 95 (364)
T ss_pred CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCc--cCC-cCCHHHHHHHHHHHhhcC--CCEEEEeCchHHHHH
Confidence 5688999998875 4454 6799999999998863211 111 112344556666655544 468999999999999
Q ss_pred HHHHHhc-CCC-CEEEEeCCCccchhHHHHhc--------CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 104 NIVLTLC-DAG-DSVVMFAPYYFNSYMSFQMT--------GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 104 ~~~~~l~-~~g-d~vlv~~p~~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
.+++... .+| ++|+....+|++........ +..+... ......+ .|.+.+++.+.++ +++|+++..
T Consensus 96 ~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~-~~~~~~~-~d~~~l~~~i~~~--~aAvivEpi 171 (364)
T PRK04013 96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVP-GFKHIPF-NDVEAAKEAITKE--TAAVIFEPI 171 (364)
T ss_pred HHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCC-CcEEecC-CCHHHHHHHhcCC--cEEEEEcCC
Confidence 9999875 234 89999999998876443221 1111000 0111111 1678888888654 488888876
Q ss_pred CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768 174 GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252 (400)
Q Consensus 174 ~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~ 252 (400)
+...|. ..|.++++++.++|++||+++|+||++.++ ..|........+...-+-+++|.+| .|+++|.++.+. +
T Consensus 172 ~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lg-gG~P~~a~~~~~---~ 246 (364)
T PRK04013 172 QGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIG-NGVPVSLTLTNF---D 246 (364)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEeccccc-CCceeEEEEecc---c
Confidence 766666 457889999999999999999999999977 4443221111111112335689998 689999988873 3
Q ss_pred HHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC
Q 015768 253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 332 (400)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (400)
+ .......+++.++++..++.+.|+.-++ ++..++.++ .+. .+.. +.+.-++.. |.++-+.+.. .
T Consensus 247 ~----~~~~~~~T~~gnp~~~aaa~a~l~~i~~--~~l~~~~~~---~l~-~l~~-~~v~~vRG~-Gl~~gve~~~---~ 311 (364)
T PRK04013 247 V----ERGKHGSTFGGNPLACKAVAVTLRILRR--ERLVEKAGE---KFI-EIKG-ERVVTTRGR-GLMIGIVLKK---P 311 (364)
T ss_pred c----cCCCcCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHH---HHH-Hhcc-CcceeeeeC-cEEEEEEeCC---c
Confidence 3 2234557888999999999998875221 111122211 122 2222 322233344 6777777753 2
Q ss_pred HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
...+...++ ++|+++.+. +.+.+||.+.. .+++++++++++|.+++.++.
T Consensus 312 ~~~i~~~~~-~~Gll~~~~----g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 312 VGKYVEELQ-NRGYLVHTA----GQRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred HHHHHHHHH-hCCcEEeeC----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 456776665 799999763 24789999887 899999999999999998764
No 297
>PLN02590 probable tyrosine decarboxylase
Probab=99.90 E-value=2.5e-20 Score=178.86 Aligned_cols=336 Identities=14% Similarity=0.069 Sum_probs=234.3
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-------CcEEEeCChHHHHHHHHHHhcC-----
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-------SSVMVTAGANQAFVNIVLTLCD----- 111 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-------~~i~~~~g~t~a~~~~~~~l~~----- 111 (400)
.++.++..+.....+.....|...+...++++.+.+|+.+.+|.+. ..-++++|+|+|+..++.+...
T Consensus 142 ~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~ 221 (539)
T PLN02590 142 SVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKK 221 (539)
T ss_pred cHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhh
Confidence 4556665555544454455666778889999999999999999875 3468899999999888776532
Q ss_pred ------CCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCC-CCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCC
Q 015768 112 ------AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSK-TLHPDADWLEKTLET----KPTPKLVSVVNPGNPS 177 (400)
Q Consensus 112 ------~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~-~~~~~~e~l~~~l~~----~~~~~~v~l~~p~npt 177 (400)
+.-.|++++.+|+++..+++.+|+ +++.+ |.+.+ .+.+|++.|++.|.. ...|-+|+.+..+..+
T Consensus 222 ~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V-p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~t 300 (539)
T PLN02590 222 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL-KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSS 300 (539)
T ss_pred hcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE-eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCC
Confidence 112566778899999999999998 57788 88753 468999999999963 2235667767788899
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-cC--CCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
|.+-| +.+|+++|++||+|++||.+|+++..-...... .. ...+=+..++||++. .+..+|.+..++. ..+.
T Consensus 301 GaiDp---l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~-~p~~cg~llvr~~-~~l~ 375 (539)
T PLN02590 301 AAVDP---LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLF-ANQTCSPLWVKDR-YSLI 375 (539)
T ss_pred cccCC---HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcC-cCcCEEEEEecCH-HHHH
Confidence 99999 999999999999999999999977643222111 11 223456668999996 6688999888862 1233
Q ss_pred HHHHH---hhc---------------cCCcC--ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 255 TQLLK---VQD---------------NIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 255 ~~l~~---~~~---------------~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
+.+.. +.. ....+ ...+-.++....+ +.+.+.++.++..++++++.+.|++.+.+++.
T Consensus 376 ~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~--G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~ 453 (539)
T PLN02590 376 DALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLY--GSENLRNFIRDHVNLAKHFEDYVAQDPSFEVV 453 (539)
T ss_pred HHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 32211 110 00111 1233333333333 55778999999999999999999998877776
Q ss_pred CCCCceEEEeeCCCCCCC-------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEKHLD-------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~ 385 (400)
.+.....+++++.....+ ..++.+++. +.|..........+..+||+++.. +++++++.+++.|.+...+
T Consensus 454 ~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~-~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 454 TTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVN-STGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred cCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 665567777776432111 135666665 455544444444556799999876 7899999999999998887
Q ss_pred Hhc
Q 015768 386 LVK 388 (400)
Q Consensus 386 ~~~ 388 (400)
+.+
T Consensus 533 ~~~ 535 (539)
T PLN02590 533 FTR 535 (539)
T ss_pred hcc
Confidence 765
No 298
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.90 E-value=1.7e-20 Score=178.43 Aligned_cols=343 Identities=14% Similarity=0.097 Sum_probs=220.1
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSI-SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+... ..+ ....+.+..+++.+.+......+.+++++++++|+
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~---~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~ 119 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF---QMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESV 119 (442)
T ss_pred CCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC---CcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 4578899998775 4453 789999999999876321 111 11234455677777655432246899999999999
Q ss_pred HHHHHHhcC-------C-CCEEEEeCCCccchhHHH-HhcC------------cEEEEeccCCCC----CCCC-------
Q 015768 103 VNIVLTLCD-------A-GDSVVMFAPYYFNSYMSF-QMTG------------VTHILVGPCSSK----TLHP------- 150 (400)
Q Consensus 103 ~~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~-~~~g------------~~~~~~~~~~~~----~~~~------- 150 (400)
+.+++.... + ..+|+....+|++..... ...| ..+..+ |.... .+..
T Consensus 120 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~ 198 (442)
T PRK13360 120 DTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHL-PHTLDLARNAFSKGQPEHGA 198 (442)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEe-CCCchhhccccCCChHHHHH
Confidence 999987541 2 368999999998865322 1111 011222 22110 0100
Q ss_pred -CHHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 151 -DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 151 -~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
.++.+++.+.. ...+.+|+++..+...|.. .+.+++++|.++|++||+++|+||++.++...|........+...-
T Consensus 199 ~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PD 278 (442)
T PRK13360 199 ELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPD 278 (442)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCc
Confidence 14577777752 2335777777667677775 6788999999999999999999999976644333221111111111
Q ss_pred EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298 (400)
Q Consensus 227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (400)
+.+++|.++ .| +++|.++.+ +++.+.+.. .....+++.+++...++.+.|+..++ ....++.+++.
T Consensus 279 ivt~gK~l~-gG~~P~gav~~~---~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~--~~l~~~~~~~g 352 (442)
T PRK13360 279 LLTCAKGLT-NGAIPMGAVFVS---SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYER--EGLLTRAARLA 352 (442)
T ss_pred eeeeeeccc-cCccceEEEEEc---HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence 337799997 56 788998888 677776643 12346788899999988888875221 23556667777
Q ss_pred HHHHHHhccCCC---CcccCCCCceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768 299 EIIREALSPLGE---GAVKGGEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED 370 (400)
Q Consensus 299 ~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~ 370 (400)
+++++.|+++.. +.-+... |.+.-+.+... .....++...++ ++||++.++ .+.+||++.. +|++
T Consensus 353 ~~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~~~~~~~~~~~~~l~-~~Gvl~~~~-----~~~lr~~Ppl~~t~~ 425 (442)
T PRK13360 353 PYWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDGKPGKRAYEVFLKCF-EKGLMIRYT-----GDILALSPPLIIEEA 425 (442)
T ss_pred HHHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCCCcchhHHHHHHHHH-HCCcEEEec-----CCEEEEeCCCccCHH
Confidence 777777765432 1112222 33333333211 112346666665 789999763 3679999887 8999
Q ss_pred HHHHHHHHHHHHHHHH
Q 015768 371 DCKAAADRLRRGLEEL 386 (400)
Q Consensus 371 ~~~~~~~~l~~~l~~~ 386 (400)
++++++++|.++++++
T Consensus 426 eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 426 QIDELFDILAQALKET 441 (442)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999764
No 299
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=1.8e-20 Score=178.61 Aligned_cols=346 Identities=13% Similarity=0.106 Sum_probs=221.0
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+...... .....+...++++.|.+......+.++|++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e 127 (457)
T PRK05639 50 VDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMI--GYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVD 127 (457)
T ss_pred CCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccccc--CccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHH
Confidence 4578899998875 4454 789999999999876321111 1111234445666666554433468999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHHh-cC--------c-----EEEEeccCCCC-C--CC----CCH--------
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG--------V-----THILVGPCSSK-T--LH----PDA-------- 152 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g--------~-----~~~~~~~~~~~-~--~~----~~~-------- 152 (400)
.+++... ....+|+....+|++....... .+ . .++.+ |.... . +. .+.
T Consensus 128 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (457)
T PRK05639 128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWI-PYPNPYRNPWGINGYEEPDELINRFL 206 (457)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEe-CCCccccccccccccCCHHHHHHHHH
Confidence 9999875 2346899999999886643221 11 1 12233 22210 0 00 012
Q ss_pred HHHHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEE
Q 015768 153 DWLEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVV 225 (400)
Q Consensus 153 e~l~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i 225 (400)
+.+++.+. ....+.+|+++..+...|. ..|.+++++|.++|++||+++|+||++.+|...|..+... .-..|+
T Consensus 207 ~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi 286 (457)
T PRK05639 207 DYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDL 286 (457)
T ss_pred HHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCE
Confidence 23454442 1234688888866766777 5678899999999999999999999998764444321111 112334
Q ss_pred EEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 226 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
+ .++|.+| .|+++|.++++ +++.+. .......+++.+++...++.+.|+.-++ ....++..++.++|++.|
T Consensus 287 v--~~gK~l~-gG~pi~av~~~---~~i~~~-~~~~~~~T~~g~p~~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L 357 (457)
T PRK05639 287 I--IFGKGVA-SGMGLSGVIGR---KELMDL-TSGSALLTPAANPVISAAAEATLEIIEE--ENLLKNALKVGEFIKKRL 357 (457)
T ss_pred E--Eechhhc-CCCcceeEEeh---HHHHhh-cCCCcccCCCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHH
Confidence 4 3789997 78999999998 677662 2222345777888888888888875221 234455555666666666
Q ss_pred cc----CCCCcccCCCCceEEEeeCCCCC--CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHH
Q 015768 306 SP----LGEGAVKGGEGAIYLWARLPEKH--LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAA 375 (400)
Q Consensus 306 ~~----~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~ 375 (400)
++ .+.+.-+... |.++.+.+.... .+ ...+...++ ++|+++.+... ..+.+||.+.. .|+++++++
T Consensus 358 ~~l~~~~~~~~~VrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~g~--~~~~lr~~Ppl~it~~~id~~ 433 (457)
T PRK05639 358 LEMKESFEVIGDVRGK-GLMIGVEIVKENGKPDPELTGKICWRAF-ELGLILPSYGM--FGNVIRITPPLVITKEIAEKG 433 (457)
T ss_pred HHHHHhCCCEEeeccc-eeEEEEEEecCCCCCCHHHHHHHHHHHH-hCCeEEeecCC--CCCEEEEeCCCccCHHHHHHH
Confidence 55 3432233344 555555542211 11 335666665 79999976421 25799999887 899999999
Q ss_pred HHHHHHHHHHHhc
Q 015768 376 ADRLRRGLEELVK 388 (400)
Q Consensus 376 ~~~l~~~l~~~~~ 388 (400)
+++|.+++.+..+
T Consensus 434 ~~~l~~~l~~~~~ 446 (457)
T PRK05639 434 LEIMERAIKDALA 446 (457)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988643
No 300
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.89 E-value=1.3e-20 Score=179.33 Aligned_cols=344 Identities=14% Similarity=0.093 Sum_probs=221.3
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+..... ......+....+++.|.+......+.++|+++|++|++
T Consensus 46 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve 123 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAP--AFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVD 123 (445)
T ss_pred CCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 5678899998775 4454 78999999999887632111 10112234456777776554323468999999999999
Q ss_pred HHHHHhcC-------C-CCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCC--CC--CC--------C
Q 015768 104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSS--KT--LH--------P 150 (400)
Q Consensus 104 ~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~--~~--~~--------~ 150 (400)
.+++.... + ..+|+....+|++....... .|. .+..+ |... .. +. .
T Consensus 124 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 202 (445)
T PRK09221 124 TALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHL-PHTLDLPENAFSKGQPEHGAE 202 (445)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEe-CCCccccccccCCChHHHHHH
Confidence 99987541 1 25799999999886533211 110 11222 2111 00 00 0
Q ss_pred CHHHHHHhhcc--CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 151 DADWLEKTLET--KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 151 ~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
.++++++.+.. ...+.+|+++..+...|.. .+.++++++.++|++||+++|+||++.++...|........+...-+
T Consensus 203 ~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi 282 (445)
T PRK09221 203 LADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDI 282 (445)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCE
Confidence 13567777752 1336788888767777875 57889999999999999999999999866543332211111111113
Q ss_pred eccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
.+++|.++ .| +++|.++.+ +++.+.+.. .....+++.+++...++.+.|+...+ ....++.+++.+
T Consensus 283 ~~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~--~~l~~~~~~~g~ 356 (445)
T PRK09221 283 ITFAKGLT-NGAIPMGAVIAS---DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYRE--EDLFERAAELAP 356 (445)
T ss_pred EEeccccc-cCcccceeeEEc---HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence 47789997 55 678999888 677776642 12345778899998888888875221 245667777778
Q ss_pred HHHHHhccC---CCCcccCCCCceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHH
Q 015768 300 IIREALSPL---GEGAVKGGEGAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 371 (400)
Q Consensus 300 ~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 371 (400)
++++.|+++ +.+.-+... |.+.-+.+... .....++...++ ++||++.++ .+.+||++.. +++++
T Consensus 357 ~l~~~l~~l~~~~~v~~vrg~-Gl~~~v~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----~~~lr~~Ppl~~t~~e 429 (445)
T PRK09221 357 YFEDAVHSLKGLPHVIDIRNI-GLVAGIELAPRPGAPGARGYEAFMKCF-EKGLLVRYT-----GDTIALSPPLIIEKAQ 429 (445)
T ss_pred HHHHHHHhhccCCCEEEEecC-ceEEEEEEecccccccchHHHHHHHHH-HCCeEEeec-----CCEEEEECCccCCHHH
Confidence 888777765 221222233 44444444321 112345666665 789999763 3689999877 89999
Q ss_pred HHHHHHHHHHHHHHH
Q 015768 372 CKAAADRLRRGLEEL 386 (400)
Q Consensus 372 ~~~~~~~l~~~l~~~ 386 (400)
+++++++|.+++.++
T Consensus 430 id~~~~~l~~~l~~~ 444 (445)
T PRK09221 430 IDELVDALGDALRAV 444 (445)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999764
No 301
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.89 E-value=2.6e-20 Score=177.65 Aligned_cols=338 Identities=15% Similarity=0.132 Sum_probs=214.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.+|||..+. ..++ .+|++.+++.+.+.+... +.. ..+.+.++++.+.+.... .+.+.|++++|+|++
T Consensus 96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e 169 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACM 169 (474)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHH
Confidence 4578899998776 3343 689999999999987532 222 234556677777665431 579999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHHh-c--CcEEE------EeccCC--C----CCCCCCHHHHHHhhcc-CCCC
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-T--GVTHI------LVGPCS--S----KTLHPDADWLEKTLET-KPTP 165 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~--g~~~~------~~~~~~--~----~~~~~~~e~l~~~l~~-~~~~ 165 (400)
.+++... ....+|+....+|+++.+.+.. . +.... .+ |.. + -.++ |++.+++.+.. ...+
T Consensus 170 ~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~n-d~~~l~~~l~~~~~~i 247 (474)
T PLN02482 170 GVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGV-PKAATSATLTAPYN-DLEAVKKLFEANKGEI 247 (474)
T ss_pred HHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCC-CCCCCCCeEEecCC-ChHHHHHHHHhCCCce
Confidence 9999875 2337899999999997643211 1 10000 00 000 0 0111 68889888863 2336
Q ss_pred eEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEE
Q 015768 166 KLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI 244 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i 244 (400)
.+|+++......|.+. +.+++++|.++|++||+++|+||++.++. .+........+....+.+++|.+| .|+++|.+
T Consensus 248 AavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR-~g~~ga~~~~gv~PDi~t~gK~lg-gG~Pigav 325 (474)
T PLN02482 248 AAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFR-IAYGGAQEYFGITPDLTTLGKVIG-GGLPVGAY 325 (474)
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCee-cCcchHhHHhCCCCCEEEecchhh-CCCceEEE
Confidence 7777776667778765 57899999999999999999999998763 332111111111112347799998 78999999
Q ss_pred EccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCC
Q 015768 245 AYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGE 317 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~ 317 (400)
+++ +++++.+.. .....+++.+++...++.+.|+..++ .+..+++.++.++|++.|+++ +...+....
T Consensus 326 ~g~---~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v 400 (474)
T PLN02482 326 GGR---REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ--PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYI 400 (474)
T ss_pred EEc---HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEccc
Confidence 888 788887753 22345777889998888888875221 234555666666666666553 221121222
Q ss_pred CceEEE-eeCCCC-------CCC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 318 GAIYLW-ARLPEK-------HLD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 318 ~~~~~~-~~~~~~-------~~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.+++.. +.-+.. ..+ ...+...++ ++||++.+.... .+ -+++. +|++|++++++++.+++.+
T Consensus 401 ~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~-~~Gv~~~~~~~~---~~-~psl~-ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 401 SGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGML-EEGVYLAPSQFE---AG-FTSLA-HTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred ceEEEEEEecCCccChhhhccCCHHHHHHHHHHHH-HCCeEEeccCCC---CC-cCCCC-CCHHHHHHHHHHHHHHHHh
Confidence 233321 211110 011 234566665 799999874321 11 13444 5999999999999999875
No 302
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=1.9e-20 Score=177.12 Aligned_cols=338 Identities=13% Similarity=0.065 Sum_probs=220.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.....+. .. ..+....+++.+.+......+.+++++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~-~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 114 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG-GL-THEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVE 114 (422)
T ss_pred CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC-Cc-CCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHH
Confidence 5678899998875 4454 6899999999998864322111 11 1233456666666554323478999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCCCC-CCCC-C----HHHH
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCSSK-TLHP-D----ADWL 155 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~-~~~~-~----~e~l 155 (400)
.+++.... ++ .+|+....+|++....... .+- ....+ |.... +... + .+.+
T Consensus 115 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~ 193 (422)
T PRK05630 115 VAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFA-PAPPVRGSSPQEISEYLRSL 193 (422)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEc-CCCcccCCChHHHHHHHHHH
Confidence 99997542 23 5799999999886533321 111 11222 22211 1000 1 2344
Q ss_pred HHhhccCCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC--CcEEEEeccc
Q 015768 156 EKTLETKPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG--DHVVNLFSFS 231 (400)
Q Consensus 156 ~~~l~~~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~--~~~i~~~s~s 231 (400)
++.+.. .+.+|+++.. +...|. .++.+.++++.++|++||+++|+||++.++...|..+..... ..|++ +++
T Consensus 194 ~~~~~~--~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~g 269 (422)
T PRK05630 194 ELLIDE--TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM--CVG 269 (422)
T ss_pred HHHHhh--ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee--eee
Confidence 444443 3588888863 777777 467889999999999999999999999877544432211111 22333 778
Q ss_pred cccCCCc-ceeEEEEccCCcHHHHHHHHHh------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768 232 KAYGMMG-WRVGYIAYPSEVEGFATQLLKV------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 232 K~~g~~g-~~~G~i~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (400)
|.++ .| ..+|+++.+ +++.+.+... ....+++.+++...++.+.|+...+ ....+++.++.+++++.
T Consensus 270 K~l~-gG~~p~~av~~~---~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~--~~~~~~~~~~g~~l~~~ 343 (422)
T PRK05630 270 KALT-GGFMSFAATLCT---DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET--GMWRKQVKRIEAELIAG 343 (422)
T ss_pred chhh-cCccccceeecc---HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHHHH
Confidence 9996 56 578999998 6777776431 3356888999999998888875221 13344566666666666
Q ss_pred hccC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768 305 LSPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR 380 (400)
Q Consensus 305 L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~ 380 (400)
|+.+ +.+.-+... |.++-+.+.... +...+...++ ++|+++.+. .+.+||.+.. .|++++++++++|.
T Consensus 344 L~~l~~~~~v~~vRg~-Gl~~~ie~~~~~-~~~~~~~~~~-~~Gl~~~~~-----g~~l~~~PpL~it~~~i~~~~~~l~ 415 (422)
T PRK05630 344 LSPLAHLPGVADVRVL-GAIGVVEMEQPV-DMEEATQAAV-DHGVWLRPF-----GRLVYVMPPYITTSEQIAQICAALA 415 (422)
T ss_pred HHHhhcCCCeeeeecc-ccEEEEEECCcc-cHHHHHHHHH-HCCeEEEec-----CCEEEEECCccCCHHHHHHHHHHHH
Confidence 6543 222223333 666666665321 3456776665 899999763 2689999887 89999999999999
Q ss_pred HHHHH
Q 015768 381 RGLEE 385 (400)
Q Consensus 381 ~~l~~ 385 (400)
+++++
T Consensus 416 ~al~~ 420 (422)
T PRK05630 416 AAVKA 420 (422)
T ss_pred HHHhc
Confidence 99865
No 303
>PRK07480 putative aminotransferase; Validated
Probab=99.89 E-value=2.2e-20 Score=178.17 Aligned_cols=347 Identities=12% Similarity=0.060 Sum_probs=218.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+...... ......+.+..+++.+.+......+.+++++++++|++
T Consensus 47 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 125 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT-FFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND 125 (456)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 5578899998875 4454 689999999999886421110 00112355566777776654333468999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhHHHHh-cCcE------------EEEeccCCC--C-CCCCC--------
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQM-TGVT------------HILVGPCSS--K-TLHPD-------- 151 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~--~-~~~~~-------- 151 (400)
.+++.... +| .+|+....+|++....... .|.. +..+ +.+. . ....+
T Consensus 126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 204 (456)
T PRK07480 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHI-DQPYWFGEGGDMTPEEFGLAA 204 (456)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeec-CCCcccccccCCChHHHHHHH
Confidence 99987642 33 5788989999886532211 1110 1111 1110 0 00001
Q ss_pred HHHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 152 ADWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 152 ~e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
++.+++.+. ....+.+|+++..+...|.+ .|.+++++|.++|++||+++|+||++.+|...|..+.....+...-+.
T Consensus 205 ~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv 284 (456)
T PRK07480 205 ARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLM 284 (456)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCee
Confidence 255655443 22336788888666667774 678889999999999999999999998775444322111112212234
Q ss_pred ccccccCCCcc-eeEEEEccCCcHHHHHHHHH----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHH-HHHHHHHH
Q 015768 229 SFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDL-VRNREIIR 302 (400)
Q Consensus 229 s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~l~ 302 (400)
+++|.++ .|. ++|.++.+ +++.+.+.. .....+++.++++..++.+.|+..++ ....++. .++.+++.
T Consensus 285 ~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~~g~~l~ 358 (456)
T PRK07480 285 TIAKGLT-SGYIPMGAVGVG---DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD--EGIVERVRDDTGPYLQ 358 (456)
T ss_pred eeehhhc-cCCccceEEEEc---HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHH
Confidence 6789997 674 89999988 677776631 23456888999999999999975221 1233334 24444444
Q ss_pred HHhc---cCCCCcccCCCCceEEEeeCCCCC------CC----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CC
Q 015768 303 EALS---PLGEGAVKGGEGAIYLWARLPEKH------LD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LV 368 (400)
Q Consensus 303 ~~L~---~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~ 368 (400)
+.|+ +++.+..+... |.+.-+.+.... .+ ...+...++ ++||++.+. .+.+||++.. ++
T Consensus 359 ~~l~~l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----~~~l~~~Ppl~it 431 (456)
T PRK07480 359 KRLRELADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHCF-ANGLIMRAV-----GDRMIISPPLVIT 431 (456)
T ss_pred HHHHHhhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHHH-HCCcEEeec-----CCEEEEECCCCCC
Confidence 4443 34433333344 555555552211 01 134445554 899999752 3679999887 79
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 015768 369 EDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 369 ~~~~~~~~~~l~~~l~~~~~ 388 (400)
++++++++++|.+++.++.+
T Consensus 432 ~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 432 HAEIDELVEKARKALDATAA 451 (456)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998754
No 304
>PRK07483 hypothetical protein; Provisional
Probab=99.89 E-value=3.1e-20 Score=176.79 Aligned_cols=351 Identities=15% Similarity=0.144 Sum_probs=221.7
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|.+.+++.+.+.+..... ......+....+++.|.+......+.+++++++++|++
T Consensus 27 ~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve 104 (443)
T PRK07483 27 ATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVE 104 (443)
T ss_pred CCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHH
Confidence 4678999998875 4454 78999999999988642111 11112344556777776554323478999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhHHHHh-cCc------------EEEEeccCC-CCCC---CC--------
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCS-SKTL---HP-------- 150 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~-~~~~---~~-------- 150 (400)
.+++.... +| .+|+....+|++....... .|- .+..+ |.. .... ..
T Consensus 105 ~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 183 (443)
T PRK07483 105 AALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHV-SPCYAYREQRAGESDEAYGQR 183 (443)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEe-CCCccccccccCCCHHHHHHH
Confidence 99997642 33 5799999999887643322 111 11112 111 0000 00
Q ss_pred CHHHHHHhhc--cCCCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 151 DADWLEKTLE--TKPTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 151 ~~e~l~~~l~--~~~~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
.++.+++.+. ....+.+|+++..+. ..|. .++.++++++.++|++||+++|.||++.++...|..+.....+...-
T Consensus 184 ~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD 263 (443)
T PRK07483 184 LADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPD 263 (443)
T ss_pred HHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCC
Confidence 1256666553 123367888886553 3454 56888999999999999999999999997754443221111111112
Q ss_pred EeccccccCCCcc-eeEEEEccCCcHHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 227 ~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
+-+++|.++ .|+ ++|.++.+ +++.+.+... ....+++.++++..++.+.|+.-++ ....++.++..++|
T Consensus 264 iv~~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~--~~l~~~~~~~g~~l 337 (443)
T PRK07483 264 LVTIAKGLG-AGYQPIGAVLAS---DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE--DGLLANVRARGEQL 337 (443)
T ss_pred eeeehhhhc-cCccccEEEEEc---HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHH
Confidence 335689997 785 89999998 6777766532 2446888899999999988875221 23344455555555
Q ss_pred HHHhc----cCCCCcccCCCCceEEEeeCCCCC-----CC-----HHHHHHHHHHhcCeEEeCCCcc--C-CCCeEEEEe
Q 015768 302 REALS----PLGEGAVKGGEGAIYLWARLPEKH-----LD-----DFEVVRWLAHRHGVVVIPGGAC--G-CRGHLRISF 364 (400)
Q Consensus 302 ~~~L~----~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~l~~~~gi~v~~g~~~--~-~~~~iRi~~ 364 (400)
++.|+ +++.+.-+... |.++-+.+.... .+ ...+...++ ++|+++.+.... + .++.+||.+
T Consensus 338 ~~~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~~~~~~~~~~~~l~~~P 415 (443)
T PRK07483 338 RARLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAM-ARGLMVYPMGGTIDGVRGDHVLLAP 415 (443)
T ss_pred HHHHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHH-HCCcEEEecCccccCCCCCEEEEEC
Confidence 55554 44433333344 555555542110 01 235666665 799999764311 1 147899998
Q ss_pred cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 365 GG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 365 ~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.. .+++++++++++|.+++.++..
T Consensus 416 pL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 416 PFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 87 8999999999999999988654
No 305
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=3.2e-20 Score=176.74 Aligned_cols=341 Identities=14% Similarity=0.099 Sum_probs=220.9
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+..... ...-..+...++++.+.+..... .+.++|+++|++|+
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~ 128 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYS--LTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESN 128 (441)
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCcc--CcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHH
Confidence 4578899998875 4454 68999999999987642111 11112344566777776654322 36899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc-------------EEEEeccCCCC-C--CC---------CCHHH
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV-------------THILVGPCSSK-T--LH---------PDADW 154 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~~-~--~~---------~~~e~ 154 (400)
+.+++... ....+|+....+|++....... .+. .+..+ |.... . ++ ..++.
T Consensus 129 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (441)
T PRK05769 129 EAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHV-PYPNPYRNPWGIENPEECGNAVLDF 207 (441)
T ss_pred HHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEe-CCCccccccccCCchHHHHHHHHHH
Confidence 99998764 2346899999999887744322 111 12222 22110 0 00 01234
Q ss_pred HHH-hhc---cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC--CCcEEEE
Q 015768 155 LEK-TLE---TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE--GDHVVNL 227 (400)
Q Consensus 155 l~~-~l~---~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~i~~ 227 (400)
+++ +++ ....+.+|+++..+...|.. .+.+++++|.++|++||+++|+||++.++...+....... -..+++
T Consensus 208 le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDiv- 286 (441)
T PRK05769 208 IEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDII- 286 (441)
T ss_pred HHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEE-
Confidence 555 332 12336778777666667774 5788999999999999999999999997654442211111 112343
Q ss_pred eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
+++|.+| .|+++|+++.+ +++..... .....+++.+++++.++.+.|+..++ +..++.+++.++|++.|++
T Consensus 287 -t~~K~l~-~G~p~gav~~~---~~i~~~~~-~~~~~T~~g~p~~~aaa~a~L~~l~~---~~~~~~~~~g~~l~~~L~~ 357 (441)
T PRK05769 287 -TLAKAIA-GGLPLGAVIGR---AELMFLPP-GSHANTFGGNPVAAAAALATLEELEE---GLLENAQKLGEYLRKELKE 357 (441)
T ss_pred -EEccccc-CCcccEEEEEe---hhhhhcCC-CCCCCCCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 5789998 78999999988 56654332 23445777899999998888875222 5566677777777777765
Q ss_pred C----CCCcccCCCCceEEEeeCCCCCC-----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768 308 L----GEGAVKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD 377 (400)
Q Consensus 308 ~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~ 377 (400)
+ +.+.-+... |.++.+.+..... ....+...++ ++||++.+. ..+.+||++.. +|++|++++++
T Consensus 358 l~~~~~~~~~vrg~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~Gil~~~~----~~~~lr~~p~l~~t~~~id~~~~ 431 (441)
T PRK05769 358 LKEKYEFIGDVRGL-GLMIGVELVKDRKEPDPKLRDKVLYEAF-KRGLLLLGA----GKSAIRIIPPLIITEEEADIGLE 431 (441)
T ss_pred HHHhCCCeeeeecc-eEEEEEEeccCCccccHHHHHHHHHHHH-hCCcEEecC----CCCEEEEeCCCCCCHHHHHHHHH
Confidence 3 322222233 5555555532100 1234555555 799999763 24789999887 89999999999
Q ss_pred HHHHHHHHH
Q 015768 378 RLRRGLEEL 386 (400)
Q Consensus 378 ~l~~~l~~~ 386 (400)
+|.+++.++
T Consensus 432 ~l~~~l~~~ 440 (441)
T PRK05769 432 ILEEAIKEL 440 (441)
T ss_pred HHHHHHHHh
Confidence 999999764
No 306
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=8.2e-21 Score=179.42 Aligned_cols=289 Identities=17% Similarity=0.173 Sum_probs=190.5
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCCCC
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSSKT 147 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~ 147 (400)
+..+.+++.+++..|. +..+++++++.|+..++.++.++||+|+++...|.+.. ..++..|++++++ + ++.
T Consensus 69 pt~~~le~~la~l~g~--~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~v-d-~~~- 143 (437)
T PRK05613 69 PTVEALENRIASLEGG--VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFV-E-NPD- 143 (437)
T ss_pred hHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEE-C-CCC-
Confidence 3445555555555564 35566666669999999998999999999999998874 4457789999988 5 222
Q ss_pred CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
|++.+++.+++++ ++|+++++.||+|.+.| +++|.++|+++|+++|+|.+++.... ......+.++++
T Consensus 144 ---d~e~l~~~l~~~t--k~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----~~p~~~GaDivv 211 (437)
T PRK05613 144 ---DPESWQAAVQPNT--KAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----VRPLELGADVVV 211 (437)
T ss_pred ---CHHHHHHhCCccC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc----cChHHhCCCEEE
Confidence 7899999998776 89999899999999999 99999999999999999999874322 222344678999
Q ss_pred eccccccCCCccee-EEEEccCCc--------------------------------HHHH-HHHHHhhccCCcCccHHHH
Q 015768 228 FSFSKAYGMMGWRV-GYIAYPSEV--------------------------------EGFA-TQLLKVQDNIPICASIISQ 273 (400)
Q Consensus 228 ~s~sK~~g~~g~~~-G~i~~~~~~--------------------------------~~~~-~~l~~~~~~~~~~~~~~~~ 273 (400)
.|++|.++..|-.+ |.++.+... +++. +.............++...
T Consensus 212 ~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a 291 (437)
T PRK05613 212 ASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNA 291 (437)
T ss_pred eeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 99999997544433 445532110 0000 1111222334556677777
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCC----------------C-CceEEEeeCCCCCCCHHH
Q 015768 274 HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGG----------------E-GAIYLWARLPEKHLDDFE 335 (400)
Q Consensus 274 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~----------------~-~~~~~~~~~~~~~~~~~~ 335 (400)
+.+...|+. +.-+++++.+++..+.+.|++++.+. +..| . .|-.+.+.+........+
T Consensus 292 ~l~~rgl~T----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~ 367 (437)
T PRK05613 292 WVTAQGLDT----LSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWA 367 (437)
T ss_pred HHHHcccCc----HHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHH
Confidence 766666665 67888899999999999999887632 2111 1 134555666521111223
Q ss_pred HHHHHHHhcCeEEeCCCcc----------------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 336 VVRWLAHRHGVVVIPGGAC----------------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~----------------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+++.| +=..+...-|... + .++.+|||++. |+.+++++.|.+++..
T Consensus 368 f~~~l-~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl---E~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 368 FIDAL-KLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI---EDIDDIIADLEGGFAA 436 (437)
T ss_pred HHHhC-CcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 33322 1111111112111 0 14689999997 6677888888888864
No 307
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=4.5e-20 Score=176.41 Aligned_cols=345 Identities=13% Similarity=0.081 Sum_probs=224.0
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+..... ...-..+.+.++++.+.+......+.++|++++++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~--~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve 121 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVI--LAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIE 121 (466)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 5578899998875 4443 68999999999987632111 10112344566777776554323468999999999999
Q ss_pred HHHHHhcC-------C-CCEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCCC-----CC------CCC
Q 015768 104 NIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-----TL------HPD 151 (400)
Q Consensus 104 ~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-----~~------~~~ 151 (400)
.+++.... + ..+|+....+|++........ |. .+..+ |.... +. .-+
T Consensus 122 ~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 200 (466)
T PRK07030 122 VALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKV-PSPDCYLRPEGMSWEEHSRRM 200 (466)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEc-CCCCccccccCCCHHHHHHHH
Confidence 99998631 2 367999999998876433222 21 11222 21110 00 002
Q ss_pred HHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 152 ~e~l~~~l~-~~~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
++.+++.+. ....+.+|+++. .+...|. ..+.++++++.++|++||+++|.||++.+|...+........+...-+-
T Consensus 201 l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv 280 (466)
T PRK07030 201 FAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFL 280 (466)
T ss_pred HHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEE
Confidence 456677775 223467888776 3666676 5678899999999999999999999998775444322111111111233
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+++|.++ +| +++|.++.+ +++.+.+.. .....+++.++++..++.+.|+..++ .+..++.++..++
T Consensus 281 ~~gKgl~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~G~~ 354 (466)
T PRK07030 281 CLSKALT-GGYLPLAAVLTT---DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQ--DNVIENNRALARR 354 (466)
T ss_pred eeehhcc-CCcccceEEEec---HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHH
Confidence 5589997 78 599999998 788776642 23456888899999999998875221 2344555666666
Q ss_pred HHHHhccC---CCCcccCCCCceEEEeeCCCCCC-------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768 301 IREALSPL---GEGAVKGGEGAIYLWARLPEKHL-------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 366 (400)
Q Consensus 301 l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~- 366 (400)
+++.|+++ +.+.-+... |.++-+.+..... + ...+...++ ++|+++.+. .+.+|+.+..
T Consensus 355 l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~i~~~Ppl~ 427 (466)
T PRK07030 355 MAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHAL-ERGALLRPL-----GSVVYFLPPYV 427 (466)
T ss_pred HHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEECCcc
Confidence 66666553 332223344 5666666532110 1 134666665 799999763 2589998776
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q 015768 367 LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 367 ~~~~~~~~~~~~l~~~l~~~~ 387 (400)
++++++++++++|.++++++.
T Consensus 428 it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 428 ITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999984
No 308
>PRK07046 aminotransferase; Validated
Probab=99.89 E-value=5.5e-20 Score=175.20 Aligned_cols=333 Identities=13% Similarity=0.070 Sum_probs=213.7
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|.+.+++.+.+.+.....+ ..+...++++.+.+..+ .+.+.|++++|+|+.
T Consensus 72 ~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~-----~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e 144 (453)
T PRK07046 72 VDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTML-----PSEDAAWVGEELARRFG--LPYWQVATTATDANR 144 (453)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHH
Confidence 4578899997765 3343 789999999999987533222 23445566666666554 578999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHH-hc-CcEEEE---ec--c--CCC----CCCCCCHHHHHHhhccCCCCeEE
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MT-GVTHIL---VG--P--CSS----KTLHPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~-g~~~~~---~~--~--~~~----~~~~~~~e~l~~~l~~~~~~~~v 168 (400)
.+++... ...++|+....+|+++.+..- .. +..... .. + ... -.++ |++.+++.+.. ..+.+|
T Consensus 145 ~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~-~~vAav 222 (453)
T PRK07046 145 FVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-DLAALEAALAD-GDVAAV 222 (453)
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-CHHHHHHHhCC-CCeEEE
Confidence 9999875 234789999999999854321 10 100000 00 0 000 0111 78899988864 336788
Q ss_pred EEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccc--cCCCCc-cccCCCcEEEEeccccccCCCcceeEEE
Q 015768 169 SVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFM--YDGRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYI 244 (400)
Q Consensus 169 ~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i 244 (400)
+++..+...|. ..+.++++++.++|++||+++|+||++. |. +++... ....+ |+ .+++|.+| +|+++|.+
T Consensus 223 i~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~P--Di--~t~gK~lg-gG~Pi~av 296 (453)
T PRK07046 223 LAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEP--DF--LVVGKPIA-GGVPCAVY 296 (453)
T ss_pred EECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCc--cc--eeehhhhc-CCCcceee
Confidence 88765555565 4567899999999999999999999986 32 222211 11222 33 35789998 78999999
Q ss_pred EccCCcHHHHHHHHHh---------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh----ccCCCC
Q 015768 245 AYPSEVEGFATQLLKV---------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL----SPLGEG 311 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~~ 311 (400)
+++ .++.+.+... ....+++.++++..++.+.|+.-.+ .+..++.++..++|++.| .+.+..
T Consensus 297 ~g~---~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~~~~ 371 (453)
T PRK07046 297 GFS---AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT--EAAYAHMLALAARLAAGLRAVIARHGLP 371 (453)
T ss_pred eeh---HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 998 7777777531 2345788899999999988874211 123334444444444444 445442
Q ss_pred cccCCCCceEEEeeCCC-CCC---------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPE-KHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 378 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~-~~~---------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~ 378 (400)
..+...+.+ +.+.+.. ... + ...+...++ ++||.+.|. .+.+++++. ++++|+++++++
T Consensus 372 ~~v~g~G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gv~~~~~-----~~~~~~~p~-~t~~did~~~~~ 443 (453)
T PRK07046 372 WHVTRVGAR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLL-NRGVLITPF-----HNMMLVCPA-TTAADVDRLVAA 443 (453)
T ss_pred eEEEEeCcE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHH-HCCCEEecc-----cCcEEEeCC-CCHHHHHHHHHH
Confidence 223333233 3333311 110 1 123455555 789999762 246788887 599999999999
Q ss_pred HHHHHHHHh
Q 015768 379 LRRGLEELV 387 (400)
Q Consensus 379 l~~~l~~~~ 387 (400)
+.++++++.
T Consensus 444 ~~~~l~~~~ 452 (453)
T PRK07046 444 FDACLGELL 452 (453)
T ss_pred HHHHHHHHh
Confidence 999998764
No 309
>PRK12403 putative aminotransferase; Provisional
Probab=99.89 E-value=7.3e-20 Score=175.05 Aligned_cols=345 Identities=12% Similarity=0.057 Sum_probs=214.9
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++++++.+.+.+....+. ...+..+...++++.+.+..+...+.++++++|++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~-~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 129 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNM-FFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE 129 (460)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeec-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 5678899997764 3343 689999999999987321110 01123345566666666554433478999999999999
Q ss_pred HHHHHhc-------CCCC-EEEEeCCCccchhH-HHHhcCcE-----------EEEeccCCC---CCCCC--------CH
Q 015768 104 NIVLTLC-------DAGD-SVVMFAPYYFNSYM-SFQMTGVT-----------HILVGPCSS---KTLHP--------DA 152 (400)
Q Consensus 104 ~~~~~l~-------~~gd-~vlv~~p~~~~~~~-~~~~~g~~-----------~~~~~~~~~---~~~~~--------~~ 152 (400)
.+++... +++. .|+....+|++... .+...|.. +..+ |... ..+.. ++
T Consensus 130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~ 208 (460)
T PRK12403 130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHI-DEPYWYANGGELTPAEFGRRAA 208 (460)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEe-CCCcccccccCCChHHHHHHHH
Confidence 9999875 2333 45566677777543 33222211 1222 2110 00000 13
Q ss_pred HHHHHhhc--cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC--CCcEEEE
Q 015768 153 DWLEKTLE--TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE--GDHVVNL 227 (400)
Q Consensus 153 e~l~~~l~--~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~i~~ 227 (400)
+.+++.+. ....+.+|+++..+...|.+ .+.+++++|.++|++||+++|+||++.++...|....... -..+++
T Consensus 209 ~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv- 287 (460)
T PRK12403 209 LQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTL- 287 (460)
T ss_pred HHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeE-
Confidence 45655553 12335777777666667865 5788999999999999999999999987754443221111 112344
Q ss_pred eccccccCCCcc-eeEEEEccCCcHHHHHHHHH----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH-HHHHHH
Q 015768 228 FSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLK----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV-RNREII 301 (400)
Q Consensus 228 ~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~l 301 (400)
+++|.+| .|. .+|.++++ +++.+.+.. .....+++.++++..++.+.|+..++ ....++.+ ++.+++
T Consensus 288 -~~gK~lg-gG~~Piga~v~~---~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~--~~l~~~~~~~~g~~l 360 (460)
T PRK12403 288 -SIAKGLT-SGYVPMGGLVLS---KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD--EGVVTRVKDDTGPYL 360 (460)
T ss_pred -EEccccc-ccccceEEEEEC---HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHH
Confidence 4789997 674 89988888 677776642 12346778899999999998875221 12334443 444555
Q ss_pred HHHhc----cCCCCcccCCCCceEEEeeCCCCC------CC----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768 302 REALS----PLGEGAVKGGEGAIYLWARLPEKH------LD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 366 (400)
Q Consensus 302 ~~~L~----~~~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~- 366 (400)
++.|+ +.+.+.-+... |.+..+.+.... .. ...+...++ ++|+++.+. .+.+|+++..
T Consensus 361 ~~~L~~l~~~~~~i~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----~~~~~l~Ppl~ 433 (460)
T PRK12403 361 QRCLREVFGDHPLVGEVQGA-GLVAALQFAEDKATRKRFANENDLAWRCRTIGF-EEGVIIRST-----LGRMIMAPALV 433 (460)
T ss_pred HHHHHHHHhcCCCEEeEeec-ceEEEEEEccCccccccccchhHHHHHHHHHHH-hCCEEEEec-----CCEEEEECCCC
Confidence 55444 44443334444 556555553211 00 112333334 799999752 2458999887
Q ss_pred CCHHHHHHHHHHHHHHHHHHhc
Q 015768 367 LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 367 ~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.|++++++++++|.+++.++.+
T Consensus 434 it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 434 AGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998753
No 310
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.89 E-value=4.4e-21 Score=175.98 Aligned_cols=338 Identities=19% Similarity=0.138 Sum_probs=213.8
Q ss_pred chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHHhhcCCCC
Q 015768 16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYK 89 (400)
Q Consensus 16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~~~~~~a~~l~~~~~~~~ 89 (400)
...+.-+.+....++.-|+|-.+++.. +|.|++++...+.+.... -|+...-.+++++...++..+.+++++
T Consensus 6 ~ei~~li~~e~~rq~~~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~ 83 (399)
T PF00464_consen 6 PEIYELIEKEEERQRSTLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEP 83 (399)
T ss_dssp HHHHHHHHHHHHHHHHSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-ST
T ss_pred HHHHHHHHHHHHHHhcCccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCc
Confidence 344445555556667889998887764 588888888877653322 233344456777778888888889874
Q ss_pred CcEEE---eCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-----H-----HhcCcEEEEeccCCCCCCCCCHHHHH
Q 015768 90 SSVMV---TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-----F-----QMTGVTHILVGPCSSKTLHPDADWLE 156 (400)
Q Consensus 90 ~~i~~---~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-----~-----~~~g~~~~~~~~~~~~~~~~~~e~l~ 156 (400)
+.-.. .-+++.|+..++.+|++|||+|+..++.+.++... . .....+.+.+ +++++...+|.|.++
T Consensus 84 ~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y-~~d~~~~~ID~d~l~ 162 (399)
T PF00464_consen 84 KEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPY-PVDPDTGLIDYDELE 162 (399)
T ss_dssp TTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEE-EB-TTTSSB-HHHHH
T ss_pred ccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEee-eeecCCCeECHHHHH
Confidence 43222 36677999999999999999999998887665421 1 2233578888 888777889999999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccC
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYG 235 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g 235 (400)
+.+.... ||+|++...++| ..+| .+++.++|++.|.+++.|.+|..+.. ++....+... .+++++|.+|.+
T Consensus 163 ~~a~~~k-PklIi~G~S~y~--~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvvt~sThKtl- 234 (399)
T PF00464_consen 163 KLAKEHK-PKLIICGASSYP--RPID---FKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVVTGSTHKTL- 234 (399)
T ss_dssp HHHHHH---SEEEEE-SSTS--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEEEEESSGGG-
T ss_pred HHHhhcC-CCEEEECchhcc--CccC---HHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEEEeeccccc-
Confidence 9988544 699998754433 4456 78888888999999999999975544 3332233333 779999999998
Q ss_pred CCcceeEEEEccCC-----------cHHHHHHHHHhhccCCcC-ccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHH
Q 015768 236 MMGWRVGYIAYPSE-----------VEGFATQLLKVQDNIPIC-ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 236 ~~g~~~G~i~~~~~-----------~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~ 302 (400)
+|.|.|.|.++.+ .+++.+++...-.....+ +......+.+.++.+ ....++++.++..+|++.|.
T Consensus 235 -~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La 313 (399)
T PF00464_consen 235 -RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALA 313 (399)
T ss_dssp --SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred -cccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 6888999998810 168888888765433333 233333333344443 23457899999999999999
Q ss_pred HHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEecc
Q 015768 303 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG 366 (400)
Q Consensus 303 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~ 366 (400)
+.|.+.+...+.+.+....+++++.....++.+....| ++.||.+..-..+. .+..|||+...
T Consensus 314 ~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~L-e~~gI~vnkn~iP~d~~~~~~sGlRlGT~~ 381 (399)
T PF00464_consen 314 EALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKAL-EEAGIIVNKNTIPGDRSPFVPSGLRLGTPA 381 (399)
T ss_dssp HHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHH-HHTTEE-EEE--TTTSTTTT-SEEEEESHH
T ss_pred HHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHH-HhcCeeecccccCCCCCCCCCCEEEECCHH
Confidence 99999887444455557888999876555676666554 68999985322111 25689999764
No 311
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=2.2e-20 Score=178.46 Aligned_cols=347 Identities=14% Similarity=0.142 Sum_probs=220.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC---CCcEEEe-CChH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY---KSSVMVT-AGAN 99 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~---~~~i~~~-~g~t 99 (400)
.+|+.++||..|. ..++ .+|++.+++.+.+.+..... ...-..+.+.++++.+.+..... .+.++++ ++++
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGS 137 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH--TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGT 137 (464)
T ss_pred CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccc--ccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcH
Confidence 4578899998775 4444 78999999999986532111 11112344445666665443211 1357676 7999
Q ss_pred HHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cCc------------EEEEeccCCCCC---C--------CCCHH
Q 015768 100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TGV------------THILVGPCSSKT---L--------HPDAD 153 (400)
Q Consensus 100 ~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~~---~--------~~~~e 153 (400)
+|++.+++... ....+|+....+|++....... .|. .+..+ |.+... + ..+++
T Consensus 138 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 138 DAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFL-PYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEe-CCCccccccccCchhhHHHHHHH
Confidence 99999999875 2236899999999887644322 110 12222 221100 0 01356
Q ss_pred HHHHhhccC----CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 154 WLEKTLETK----PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 154 ~l~~~l~~~----~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
.+++.+... ..+.+|+++..+...|.+ .|.++++++.++|++||+++|.||++.+|...|..+.....+...-+-
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv 296 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVV 296 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEE
Confidence 777777531 236888887666666765 579999999999999999999999999875444322111112112233
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-
Q 015768 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP- 307 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~- 307 (400)
+++|.+| .|+++|.++.+ +++ +.+.......+++.++++..++.+.|+.-++ .+..++.++..+++.+.|++
T Consensus 297 ~~gKglg-gG~PlsAv~~~---~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~--~~l~~~~~~~G~~l~~~L~~l 369 (464)
T PRK06938 297 VLSKAIG-GSLPLAVVVYR---EWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE--HRLAEHAAAMGERLREHLRQL 369 (464)
T ss_pred Eeecccc-CCCceEEEeeh---hHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHH
Confidence 5589997 78999999988 454 4443334557888999999999998875221 23445555555666655554
Q ss_pred ---CCCCcccCCCCceEEEeeCCCCCC----------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768 308 ---LGEGAVKGGEGAIYLWARLPEKHL----------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED 370 (400)
Q Consensus 308 ---~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~ 370 (400)
++.+.-+... |.++.+.+..... + ...+...++ ++|+++.++.. ..+.+|+.+.. +|++
T Consensus 370 ~~~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~g~--~~~~l~~~Ppl~it~~ 445 (464)
T PRK06938 370 QRDYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECL-RRGLILELGGR--HGSVVRFLPPLIITAE 445 (464)
T ss_pred HHhCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHH-HCCeEEeecCC--CCCEEEEECCCccCHH
Confidence 4433333344 5666666532100 1 234555555 79999976432 24789999776 8999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 015768 371 DCKAAADRLRRGLEELV 387 (400)
Q Consensus 371 ~~~~~~~~l~~~l~~~~ 387 (400)
+++.+++++.+++.++.
T Consensus 446 eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 446 QIDEVAEIFAEAVAAAV 462 (464)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998754
No 312
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=1.8e-20 Score=179.26 Aligned_cols=346 Identities=12% Similarity=0.093 Sum_probs=223.1
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+..... ...-..+.+.++++.|.+......+.+++++++++|++
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~--~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve 130 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHST--LLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVE 130 (460)
T ss_pred CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcc--ccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 4578899997765 3443 78999999999988632111 00012234556777776654323468999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCC-----CCCC------CC
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS-----KTLH------PD 151 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~-----~~~~------~~ 151 (400)
.+++.... +| .+|+....+|++........ |. .+..+ |... .+.. .+
T Consensus 131 ~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~-p~p~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK06916 131 IAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKM-PYPYTYRSPYGNDKAEIVKKH 209 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEe-CCCcccccccCCChHHHHHHH
Confidence 99997652 33 68999999998866433222 11 11222 2110 0000 13
Q ss_pred HHHHHHhhc-cCCCCeEEEEeC-CCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 152 ADWLEKTLE-TKPTPKLVSVVN-PGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 152 ~e~l~~~l~-~~~~~~~v~l~~-p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
++.+++.++ ....+.+|+++. .+...|.+ +|.++++++.++|++||+++|.||++.++...|..+.....+...-+.
T Consensus 210 ~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv 289 (460)
T PRK06916 210 LEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIM 289 (460)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCee
Confidence 556677775 223468888886 46667765 689999999999999999999999998774444322111111111133
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+++|.++ .| +++|.++.+ +++.+.+.. .....+++.++++..++.+.|+.-++ ....++.+++.++
T Consensus 290 ~~gK~l~-gG~~Pi~av~~~---~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~ 363 (460)
T PRK06916 290 TAGKGLT-GGYLPIAITVTT---DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEK--TNLIEQVARKTEY 363 (460)
T ss_pred eeehhhh-cCccccceeeec---HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHH
Confidence 5689997 78 589999998 677766542 22445788899999888888875221 2345566666666
Q ss_pred HHHHhccC---CCCcccCCCCceEEEeeCCCCC-------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768 301 IREALSPL---GEGAVKGGEGAIYLWARLPEKH-------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 366 (400)
Q Consensus 301 l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~- 366 (400)
+++.|+++ +.+.-+... |.++-+.+.... .+ ...+...++ ++||.+.+. .+.+|+.+..
T Consensus 364 l~~~l~~l~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~-----g~~l~~~Ppl~ 436 (460)
T PRK06916 364 VATQLEDLFALKHVGDIRQL-GLMVGIELVKNKETKEPFEWTERVGVQVCKRSR-ELGMLTRPL-----GNTIVFMPPLA 436 (460)
T ss_pred HHHHHHHhhcCCCeEEeecC-CceeeEEeecccccccCCCchhhHHHHHHHHHH-HCCeEEEec-----CCEEEEeCCcc
Confidence 76666654 322223333 444444443210 01 235666665 899999773 3689999776
Q ss_pred CCHHHHHHHHHHHHHHHHHHhc
Q 015768 367 LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 367 ~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++++|+++++++|.++++++.+
T Consensus 437 it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 437 STIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred cCHHHHHHHHHHHHHHHHhhcc
Confidence 8999999999999999988654
No 313
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.89 E-value=4.9e-21 Score=178.25 Aligned_cols=314 Identities=15% Similarity=0.122 Sum_probs=205.0
Q ss_pred CCcHHHHHHHHHhhcCC---CCCCCCCCC---CcHHHHHHHHHHHHhhcCC-CCCcEEEeCC-hHHHHHHHHHHhcC---
Q 015768 43 QPPKMAMEKVKELVWDP---SISKYGADE---GLPELRDALVKKLNQENKL-YKSSVMVTAG-ANQAFVNIVLTLCD--- 111 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~---~~~~y~~~~---g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g-~t~a~~~~~~~l~~--- 111 (400)
..|++|++++.+.+.+. ..+.|.... ...++.+.+.+.+++.++. +++++++++| +|++++.++.++..
T Consensus 9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~ 88 (355)
T cd00611 9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKG 88 (355)
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 46899999999987432 122333231 2225555666666666687 4678999988 99999999999987
Q ss_pred CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCC-HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 112 ~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
+||.|++ .+....+.+.++..|+++..+ +.++++...+ .+..+..++++ .++|.+++.+|.||...+
T Consensus 89 ~~~~i~~-g~~~~~~~~~a~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~--~~lV~~~h~~t~tG~~~~-------- 156 (355)
T cd00611 89 TADYVVT-GAWSAKAAKEAKRYGGVVVIV-AAKEEGKYTKIPDVETWDLAPD--AAYVHYCSNETIHGVEFD-------- 156 (355)
T ss_pred eEEEEEC-CHHHHHHHHHHHhcCCCcEEE-ecccccCCCCCCCHhhcCCCCC--CCEEEEeCCcccccEEcc--------
Confidence 4555544 222233345678889988888 6654431113 22232334444 499999999999999754
Q ss_pred HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ--------- 261 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~--------- 261 (400)
++++.||+++++|.+++.+ ..+......+ +.+.|.+|.+|.+| +|.++.+ +++.+++....
T Consensus 157 ~i~~~~g~~~~VDa~qs~g---~~~idv~~~~--~~~ss~~K~lGP~G--~g~l~~~---~~~~~~~~~~~~~~~~~~~~ 226 (355)
T cd00611 157 EVPDTGGVPLVADMSSNIL---SRPIDVSKFG--VIYAGAQKNLGPAG--VTVVIVR---KDLLGKARKITPSMLNYKTH 226 (355)
T ss_pred eecccCCCeEEEEcccccc---CCCCCHHHhC--EEEeecccccCCCc--eEEEEEC---HHHHhhcccCCCCcccHHHH
Confidence 2334599999999999843 3333333333 45667899998555 6888888 56665543210
Q ss_pred ---ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCc-c-cCC--CCceEEEeeCCCCCCC
Q 015768 262 ---DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGA-V-KGG--EGAIYLWARLPEKHLD 332 (400)
Q Consensus 262 ---~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~ 332 (400)
....+++|....+++.++++.-.+ ..+.+.++.+++.+++++.|++++++. . ..+ .++..+.+.++... .
T Consensus 227 ~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~-l 305 (355)
T cd00611 227 ADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEE-L 305 (355)
T ss_pred HhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChh-h
Confidence 112356777788887777775222 367888999999999999999985432 1 111 22244556665421 1
Q ss_pred HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
..++...+ .+.|+.+.++.. ..+.+|+|+.. +|.+|++.+++.|+++
T Consensus 306 ~~~~~~~~-~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 306 EKEFLKEA-EAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred hHHHHHHH-HHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 23443444 478998655543 34789999988 9999999999988874
No 314
>PRK07481 hypothetical protein; Provisional
Probab=99.89 E-value=3.6e-20 Score=176.79 Aligned_cols=345 Identities=14% Similarity=0.108 Sum_probs=219.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+...... ......+.+.++++.|.+..+. ..+.++|++++++|+
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAv 117 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST-FDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSV 117 (449)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec-ccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHH
Confidence 5678899998764 4454 689999999999876432111 0011234556677777665431 236899999999999
Q ss_pred HHHHHHhcC-------CC-CEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCC---CCC-CCHHH---
Q 015768 103 VNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK---TLH-PDADW--- 154 (400)
Q Consensus 103 ~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~---~~~-~~~e~--- 154 (400)
+.+++.... +| .+|+....+|++.......... .+..+ +.+.. .++ .|.+.
T Consensus 118 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~d~~~~~~ 196 (449)
T PRK07481 118 ETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHV-ETPWLYRNPFTEQDPEELAR 196 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEe-CCCcccccccCCCCHHHHHH
Confidence 999997642 23 6799999999996643222110 11112 11100 011 13333
Q ss_pred -----HHHhhc--cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 155 -----LEKTLE--TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 155 -----l~~~l~--~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
+++.+. ....+.+|+++..+...|. .++.++++++.++|++||+++|.||++.+|...+........+...-
T Consensus 197 ~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PD 276 (449)
T PRK07481 197 ICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPD 276 (449)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCC
Confidence 344443 2234688888876766777 46888999999999999999999999998754442211111111111
Q ss_pred EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298 (400)
Q Consensus 227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (400)
+-+++|.++ .| +++|.++.+ +++.+.+.. .....+++.++++..++.+.|+..++ .+..++.++..
T Consensus 277 iv~~gKgl~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g 350 (449)
T PRK07481 277 IMCLAKGIT-SGYVPLGATMVN---ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR--EDLPANAAKRG 350 (449)
T ss_pred EEEEeeccc-CCCcCceEEEEc---HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHH
Confidence 335589997 67 589999998 677777653 13456788899999999888875221 23445555556
Q ss_pred HHHHHHhcc----CCCCcccCCCCceEEEeeCCCCC-----CC-----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe
Q 015768 299 EIIREALSP----LGEGAVKGGEGAIYLWARLPEKH-----LD-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISF 364 (400)
Q Consensus 299 ~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~ 364 (400)
+++.+.|++ ++.+.-+... |.++.+.+.... .+ ...+...++ ++||++.+. .+.+||++
T Consensus 351 ~~l~~~L~~l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~-----g~~i~l~P 423 (449)
T PRK07481 351 AYLLEGLQPLKERFELVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVAR-ENGVLVRPS-----GTKIILSP 423 (449)
T ss_pred HHHHHHHHHHhhcCCCeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHHH-hCCeEEEec-----CCEEEEEC
Confidence 666665554 3332233344 555555553210 01 234555554 799999774 24689997
Q ss_pred cc-CCHHHHHHHHHHHHHHHHHH
Q 015768 365 GG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 365 ~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.. +|++|+++++++|.++++++
T Consensus 424 pl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 424 PLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhc
Confidence 76 79999999999999999865
No 315
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=3.5e-20 Score=177.04 Aligned_cols=345 Identities=13% Similarity=0.091 Sum_probs=220.0
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-----CCCcEEEeCCh
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-----YKSSVMVTAGA 98 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-----~~~~i~~~~g~ 98 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.... . ...-..+.+..+++.+.+.... ..+.+++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~-~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sG 138 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQV-M-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNG 138 (472)
T ss_pred CCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCc-c-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCc
Confidence 5678899998875 4443 6899999999988642111 0 0011123456677777655421 23689999999
Q ss_pred HHHHHHHHHHhcC-------C-CCEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCCC-----CC----
Q 015768 99 NQAFVNIVLTLCD-------A-GDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSSK-----TL---- 148 (400)
Q Consensus 99 t~a~~~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~-----~~---- 148 (400)
++|++.+++.... + ..+|+....+|++........ |. .+..+ |.... +.
T Consensus 139 SEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~-~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 139 SAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFA-PSPDAYLAEPGQSAED 217 (472)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEe-CCCCccccccCCCHHH
Confidence 9999999998642 2 268999999998876433222 11 11222 22110 00
Q ss_pred --CCCHHHHHHhhc-cCCCCeEEEEeC-CCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 149 --HPDADWLEKTLE-TKPTPKLVSVVN-PGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 149 --~~~~e~l~~~l~-~~~~~~~v~l~~-p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
..+++.+++.+. ....+.+|+++. .+...|. ..|.++++++.++|++||+++|.||++.+|...|..+.....+.
T Consensus 218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv 297 (472)
T PRK08742 218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV 297 (472)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC
Confidence 002466667664 223467888875 3666776 57889999999999999999999999998765443222211222
Q ss_pred EEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 296 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 296 (400)
..-+-+++|.+| +| +++|.++.+ +++.+.+.. .....+++.++++..++.+.|+..++ ++..++.++
T Consensus 298 ~PDiv~~gKgl~-gG~~Plaav~~~---~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~--~~l~~~~~~ 371 (472)
T PRK08742 298 MPDLLCLSKGLT-GGFLPLSAVLAT---QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD--DDVIARNQP 371 (472)
T ss_pred CCCEEEEccccc-CCCCCcceeecc---HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH--CCHHHHHHH
Confidence 222335589997 78 489999998 677776642 12456788899999999988875221 122333333
Q ss_pred HHHHHHH---HhccCCCCcccCCCCceEEEeeCCCCCC-----C-----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEE
Q 015768 297 NREIIRE---ALSPLGEGAVKGGEGAIYLWARLPEKHL-----D-----DFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 363 (400)
Q Consensus 297 ~~~~l~~---~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~ 363 (400)
..+++.+ .+++++.+.-+... |+++-+.+..... + ...+...++ ++||++.+. .+.+||.
T Consensus 372 ~g~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----g~vi~~~ 444 (472)
T PRK08742 372 TAARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAAL-ARGVVLRPL-----GDVLYWM 444 (472)
T ss_pred HHHHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHH-HCCeEEEec-----CCEEEEE
Confidence 3333333 34445443334444 5666665532110 1 134555554 799999763 3689999
Q ss_pred ecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 364 FGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 364 ~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+.. .+++++++++++|.+++.++.
T Consensus 445 PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 445 PPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 887 899999999999999998764
No 316
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.89 E-value=4.4e-20 Score=175.18 Aligned_cols=340 Identities=14% Similarity=0.091 Sum_probs=219.0
Q ss_pred hcCCCeEEcCCCC--CCC-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYW-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~-~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..+ ..+|++++++.+.+.+......... .......+++.+.+..+-.-+.+++++++++|++
T Consensus 42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e 119 (427)
T TIGR00508 42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGF--THKPAIELCQKLVKMTPNALDCVFLADSGSVAVE 119 (427)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccc--CCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHH
Confidence 4578899998875 344 3789999999998876431111111 1123345666665554323478999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhHHHHh-cCcE-------------EEEeccCCCCCC-----CCCHHHHH
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQM-TGVT-------------HILVGPCSSKTL-----HPDADWLE 156 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~-~g~~-------------~~~~~~~~~~~~-----~~~~e~l~ 156 (400)
.+++.... +| .+|+....+|++....+-. .+.. ...+ |.....+ .-++++++
T Consensus 120 ~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~l~ 198 (427)
T TIGR00508 120 VALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFA-PAPQNRFDEEWNEEAITPLA 198 (427)
T ss_pred HHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEc-CCCCccccchhHHHHHHHHH
Confidence 99987541 23 6899999999886543322 1211 0111 1110101 01456777
Q ss_pred Hhhcc-CCCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccc
Q 015768 157 KTLET-KPTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFS 231 (400)
Q Consensus 157 ~~l~~-~~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~s 231 (400)
+.+.. ...+++|+++.. +...|. .++.+++++|.++|++||+++|+||++.++...+..+... .-..+++ +++
T Consensus 199 ~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~--~~g 276 (427)
T TIGR00508 199 KLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDIL--CVG 276 (427)
T ss_pred HHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEE--Eec
Confidence 77752 223567777753 666666 5688999999999999999999999997664444321111 1122344 379
Q ss_pred cccCCCcc-eeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 232 KAYGMMGW-RVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 232 K~~g~~g~-~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
|.++ +|+ .++.++.+ +++.+.+... ....++..++++..++.++|+.-.+ ....++.+++.++|++.|
T Consensus 277 K~l~-gG~~p~~a~~~~---~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~--~~~~~~~~~~~~~l~~~L 350 (427)
T TIGR00508 277 KALT-GGYMTLSATVTT---DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLE--GEWQKQVSAIENQLKREL 350 (427)
T ss_pred hhhh-cCcccceEEEEc---HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH
Confidence 9996 774 78888888 6787777642 1345667789999998888874111 133456666777777777
Q ss_pred ccCCCCc---ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 306 SPLGEGA---VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 306 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+++.... -.... +.++.+.+... .....+..+++ ++||.+.+. .+.+|+++.. ++++|+++++++|.+
T Consensus 351 ~~l~~~~~i~~vrg~-G~~~~i~~~~~-~~~~~~~~~l~-~~Gv~~~~~-----~~~l~~~ppl~~t~~~id~~~~~l~~ 422 (427)
T TIGR00508 351 SPLRKNPVVKDVRVL-GAIGVVEMYKP-VNVEELQKKFV-EQGVWIRPF-----GKLIYVMPPYIITTEQLQKLTAALIE 422 (427)
T ss_pred HHhhcCCCEEeEecc-ccEEEEEECCc-cCHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 6654311 11122 45555555432 23567777775 789999763 2479999886 799999999999999
Q ss_pred HHHH
Q 015768 382 GLEE 385 (400)
Q Consensus 382 ~l~~ 385 (400)
++++
T Consensus 423 ~l~~ 426 (427)
T TIGR00508 423 ALHE 426 (427)
T ss_pred HHhc
Confidence 9864
No 317
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.88 E-value=4.9e-20 Score=174.32 Aligned_cols=338 Identities=12% Similarity=0.065 Sum_probs=214.5
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++|+..+. ..++ .+|++.+++.+.+.+... +.. ..+.+.++++.+.+..+...+.++|++++++|++
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~--~~~---~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e 124 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTS--YGL---TSEQEILFAEELFSYLGLEDHKIRFVSSGTEATM 124 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCC--CCC---CCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence 5578899998875 4454 789999999999886432 211 1234556666666655433468999999999999
Q ss_pred HHHHHhcC--CCCEEEEeCCCccchhHH----HHhcCcE---E-EEe--ccCCCC----CCCCCHHHHHHhhcc-CCCCe
Q 015768 104 NIVLTLCD--AGDSVVMFAPYYFNSYMS----FQMTGVT---H-ILV--GPCSSK----TLHPDADWLEKTLET-KPTPK 166 (400)
Q Consensus 104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~----~~~~g~~---~-~~~--~~~~~~----~~~~~~e~l~~~l~~-~~~~~ 166 (400)
.+++.... ...+|+....+|+++.+. +...+-. . ... .+.... .+ -|++.+++.+.. ...+.
T Consensus 125 ~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~a 203 (433)
T PRK00615 125 TAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNSLGHRVA 203 (433)
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHhcCCceE
Confidence 99998752 236899999999997522 1111100 0 000 000000 11 267888888863 23357
Q ss_pred EEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCCcceeEE
Q 015768 167 LVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGY 243 (400)
Q Consensus 167 ~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~G~ 243 (400)
+|+++......|.. .+.+++++|.++|++||+++|+||++.++. .+...... .-..+++ +++|.+| .|+++|+
T Consensus 204 avI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R-~G~~ga~~~~gv~PDi~--~~gK~lg-gG~p~~a 279 (433)
T PRK00615 204 GVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR-VAQGGAAAIYHVKPDIT--VYGKILG-GGLPAAA 279 (433)
T ss_pred EEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccHhHHHHhcCCCCCeE--EEccccc-CCcceee
Confidence 77777666667775 467899999999999999999999997662 22211111 1122343 5799997 6788999
Q ss_pred EEccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh----ccCCC-CcccC
Q 015768 244 IAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL----SPLGE-GAVKG 315 (400)
Q Consensus 244 i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L----~~~~~-~~~~~ 315 (400)
++++ +++.+.+... ....+++.+++...++.+.|+.-++ ....++++++.+++.+.| ++.+. +...+
T Consensus 280 v~~~---~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~--~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r 354 (433)
T PRK00615 280 VVAH---KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE--QGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR 354 (433)
T ss_pred eeec---HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe
Confidence 9998 7888777432 2335677888998888888875221 123445555555554444 44332 23333
Q ss_pred CCCceEEEeeCCCCCC---------C---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEKHL---------D---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~~---------~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
. +.++.+.+..... + ...+..++. ++||++.+.... .+ =++.. ++++|++++++++.+++
T Consensus 355 -~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~---~~-~ls~~-ht~~did~~~~a~~~~~ 426 (433)
T PRK00615 355 -Y-GSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAF-SKGVYLSPSPFE---AS-FLSSA-HSMENLDYAQNVLIDSL 426 (433)
T ss_pred -e-ceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHH-HCCeeecCcccc---cc-ceecC-CCHHHHHHHHHHHHHHH
Confidence 3 5555555532210 1 225666665 789999875421 11 24555 49999999999999999
Q ss_pred HHHh
Q 015768 384 EELV 387 (400)
Q Consensus 384 ~~~~ 387 (400)
++..
T Consensus 427 ~~~~ 430 (433)
T PRK00615 427 EKVF 430 (433)
T ss_pred HHHh
Confidence 8864
No 318
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.88 E-value=3.6e-20 Score=173.60 Aligned_cols=304 Identities=16% Similarity=0.108 Sum_probs=206.8
Q ss_pred cHHHHHHHHHHHHhhcCCCC-CcEEEeCChH-HHHHHHHHHhcC---CCCEEEEeCCCccchhHHHHhcCcEEEEecc--
Q 015768 70 LPELRDALVKKLNQENKLYK-SSVMVTAGAN-QAFVNIVLTLCD---AGDSVVMFAPYYFNSYMSFQMTGVTHILVGP-- 142 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t-~a~~~~~~~l~~---~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~-- 142 (400)
...+.+.+.+.+.+..|++. ...++++++| .++..++.++.. +||.|+++..+|.++..++...|++++.+ +
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~V-d~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVI-ETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEe-eee
Confidence 45677778888888888763 4588899998 688888888763 58999999999999999999999999999 6
Q ss_pred CCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCC-CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cc
Q 015768 143 CSSKTLHPDADWLEKTLETKP-TPKLVSVVNPG-NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CC 218 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~-nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~ 218 (400)
.+++.+.+|++.+++++++.+ ...++++.+|+ +++|...+ +++|.++|++||+++|+|++|+.....-... ..
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd---L~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g 258 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD---IEEIAKICANYDIPHIVNNAYGLQSNKYMELINKA 258 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC---HHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcc
Confidence 467778999999999998532 23555555554 33444555 9999999999999999999999533211101 11
Q ss_pred cCC-CcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 015768 219 VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRN 297 (400)
Q Consensus 219 ~~~-~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 297 (400)
... ..++++.|++|++.+++. .|.++.++ +++.+.+...... ...+.+.+.+...++..+.++++++.++..++
T Consensus 259 ~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d--~el~~~i~~~y~g--~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~ 333 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVPVG-GAIIYSFD--ENFIQEISKSYPG--RASASPSLDVLITLLSLGSKGYLELLKERKEM 333 (444)
T ss_pred ccccCCCeEEEeCccCCCCCCC-EEEEEECC--HHHHHHHHHhccC--CCCChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 111 246888899999976654 45555655 7888887764322 22445677777778877788889999999999
Q ss_pred HHHHHHHhccCCC---CcccCC-CCceEEEeeCCCC-CCCHHHHHHHHHHhcCeE----EeCCC-------cc---CC--
Q 015768 298 REIIREALSPLGE---GAVKGG-EGAIYLWARLPEK-HLDDFEVVRWLAHRHGVV----VIPGG-------AC---GC-- 356 (400)
Q Consensus 298 ~~~l~~~L~~~~~---~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~----v~~g~-------~~---~~-- 356 (400)
++++.+.|+++.. .++... ....-+.+.+... ..+...+-..|. .++|. |.+|. .| +.
T Consensus 334 a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~-~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~ 412 (444)
T TIGR03531 334 YKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLY-SRRVTGPRVVTNGDSKTVGGCEFKGYGSHT 412 (444)
T ss_pred HHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHH-hCCCCCceeecCCCceEECCEEeecccccc
Confidence 9999998887531 133322 2122222222211 124555555554 56652 34554 22 11
Q ss_pred ----CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 357 ----RGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 357 ----~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
..++=++.+. ++.+|++..+++|.+++
T Consensus 413 ~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 413 SNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred cCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 1244444333 69999999999998763
No 319
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.88 E-value=1.2e-19 Score=172.57 Aligned_cols=334 Identities=13% Similarity=0.122 Sum_probs=215.8
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.....+ ..+...++++.+.+... ..+.++|++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e 123 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGT-----PTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVM 123 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCC-----CCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHH
Confidence 5578899998775 3344 689999999999886432222 12344566666655443 2478999999999999
Q ss_pred HHHHHhcC--CCCEEEEeCCCccchhHHHHh-cCcEEE--------Eecc-CCCCC---CCCCHHHHHHhhcc-CCCCeE
Q 015768 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQM-TGVTHI--------LVGP-CSSKT---LHPDADWLEKTLET-KPTPKL 167 (400)
Q Consensus 104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~-~g~~~~--------~~~~-~~~~~---~~~~~e~l~~~l~~-~~~~~~ 167 (400)
.+++.... ...+|+....+|++....... .|.... .+.+ ..++- ...|++.+++.+.. ...+.+
T Consensus 124 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaa 203 (428)
T PRK12389 124 TTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAA 203 (428)
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEE
Confidence 99997652 346899999999997644322 221110 0000 00000 01268888888862 233677
Q ss_pred EEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC----ccccCCCcEEEEeccccccCCCcceeE
Q 015768 168 VSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK----HCCVEGDHVVNLFSFSKAYGMMGWRVG 242 (400)
Q Consensus 168 v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~~i~~~s~sK~~g~~g~~~G 242 (400)
|+++..+...|.+ .+.+++++|.++|++||+++|+||++.+|.. +.. +....+| + .+++|.+| .|+++|
T Consensus 204 vi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt-~~~~a~~~~gv~PD--i--vt~gK~lg-gG~Pi~ 277 (428)
T PRK12389 204 VLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRF-MYGGAQDLLGVEPD--L--TALGKIIG-GGLPIG 277 (428)
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccccc-CcchhhHHhCCCCC--e--eeechhhc-CCCcee
Confidence 8877667777865 5788999999999999999999999997732 211 1122222 3 47789997 789999
Q ss_pred EEEccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCC-ccc
Q 015768 243 YIAYPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEG-AVK 314 (400)
Q Consensus 243 ~i~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~-~~~ 314 (400)
.++++ +++.+.+.. .....+++.|++...++.+.|+.-++ +...++.+++.+++++.|++ ++.+ .+.
T Consensus 278 av~~~---~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~ 352 (428)
T PRK12389 278 AYGGR---KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ--EGVYEKLDRLGAMLEEGILEAAEKHGITITIN 352 (428)
T ss_pred EEeEH---HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 99888 788777642 22345778899999999888875221 23445566666666666654 4432 232
Q ss_pred CCCCceEEEeeCCCC-C--------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEK-H--------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~-~--------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
+.. +++ -+.+... . .+ ...+...+. ++||++.+.. .+.+.+++. ++++|++++++++.++
T Consensus 353 r~~-g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~~~~~l~-~t~e~id~~~~~l~~~ 424 (428)
T PRK12389 353 RLK-GAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLML-NQGINLAPSK----YEAWFLTTA-HTEEDIEETLEAVDRA 424 (428)
T ss_pred ecC-cEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHH-HCCcEeecCC----CCCeeecCC-CCHHHHHHHHHHHHHH
Confidence 333 333 2332111 0 01 234555554 7999998742 223455554 5999999999999999
Q ss_pred HHH
Q 015768 383 LEE 385 (400)
Q Consensus 383 l~~ 385 (400)
+++
T Consensus 425 l~~ 427 (428)
T PRK12389 425 FAQ 427 (428)
T ss_pred HHh
Confidence 875
No 320
>PRK07036 hypothetical protein; Provisional
Probab=99.88 E-value=1.5e-19 Score=172.96 Aligned_cols=346 Identities=12% Similarity=0.091 Sum_probs=220.9
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCC-CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSI-SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+... ..+. ....+.+..+++.+.+.....-+.++|++++++|+
T Consensus 48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAv 125 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAV 125 (466)
T ss_pred CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHH
Confidence 5678899998775 4443 689999999998876321 1111 01234556677777665432346899999999999
Q ss_pred HHHHHHhc------C-C-CCEEEEeCCCccchhHHHHhc-Cc------------EEEEeccCCC--C-CCCCC-------
Q 015768 103 VNIVLTLC------D-A-GDSVVMFAPYYFNSYMSFQMT-GV------------THILVGPCSS--K-TLHPD------- 151 (400)
Q Consensus 103 ~~~~~~l~------~-~-gd~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~--~-~~~~~------- 151 (400)
+.+++... . + ..+|+....+|++........ |. .+..+ |... . ....+
T Consensus 126 e~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~ 204 (466)
T PRK07036 126 DSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHL-SSPNPYRRPAGMSEAAFCDF 204 (466)
T ss_pred HHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEe-cCCcccccccCCChHHHHHH
Confidence 99999763 1 2 268999999998876433221 11 12222 2111 0 00111
Q ss_pred -HHHHHHhhc--cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-CCCcEEE
Q 015768 152 -ADWLEKTLE--TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-EGDHVVN 226 (400)
Q Consensus 152 -~e~l~~~l~--~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~~~i~ 226 (400)
++.+++.+. ....+.+|+++..+...|. .++.+++++|.++|++||+++|+||++.+|...|...... ..+...-
T Consensus 205 ~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PD 284 (466)
T PRK07036 205 LVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPD 284 (466)
T ss_pred HHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCC
Confidence 234555553 2234688888876766777 4688899999999999999999999998775433211111 1111111
Q ss_pred EeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298 (400)
Q Consensus 227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (400)
+.+++|.+| .| +++|.++.+ +++.+.+.. +....+++.++++..++.+.|+.-++ .+..++.+++.
T Consensus 285 ivt~gK~l~-gG~~Pi~av~~~---~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~--~~l~~~~~~~g 358 (466)
T PRK07036 285 IITFAKGLT-SGYQPLGAVIIS---ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMER--EGLCEHVREVG 358 (466)
T ss_pred EEEEccccc-cCccccEEEEEc---HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHH
Confidence 336689997 77 589999998 788777653 23345788899999999998875221 23445555555
Q ss_pred HHHHHHhcc---CCCCcccCCCCceEEEeeCCCCC-------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEec
Q 015768 299 EIIREALSP---LGEGAVKGGEGAIYLWARLPEKH-------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG 365 (400)
Q Consensus 299 ~~l~~~L~~---~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~ 365 (400)
++|++.|+. ++.+.-+... |.++.+.+.... .+ ...+...++ ++||.+.+. .+.+|+++.
T Consensus 359 ~~l~~~L~~l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~-----~~~~~l~Pp 431 (466)
T PRK07036 359 PYFEERLASLRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHCQ-ERGLLVRPL-----EHLCVLSPP 431 (466)
T ss_pred HHHHHHHHHhccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHHH-HCCcEEeec-----CCEEEEeCC
Confidence 666555544 3332223334 556666653211 01 234555554 899999763 257899977
Q ss_pred c-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 366 G-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 366 ~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
. +|++|+++++++|.++++++.+
T Consensus 432 l~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 432 LIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHH
Confidence 6 7999999999999999988743
No 321
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.88 E-value=4.7e-20 Score=171.37 Aligned_cols=280 Identities=17% Similarity=0.171 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCC-C
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSS-K 146 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~-~ 146 (400)
...+++++.+++..|. +..+.+++++.|+..++.++.++||+|+++.+.|.+.. ..+...|++++++ +.++ +
T Consensus 64 P~~~~lE~~la~leg~--~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fv-d~~~~~ 140 (384)
T PRK06434 64 PTVQAFEEKYAVLENA--EHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYI-DTDRLN 140 (384)
T ss_pred hhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEE-CCCChh
Confidence 3344444444444453 56788899999999999999999999999988776655 5567789999999 6653 2
Q ss_pred CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
.+. +++. .+++|++..|+||++.+.| +++|.++|++++ +++|.+++.... + .....+.+++
T Consensus 141 ~~~---------l~~~-~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~~-~---~pl~~gaDiv 201 (384)
T PRK06434 141 SLD---------FDPS-NYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPYN-Q---NPLDLGADVV 201 (384)
T ss_pred hee---------ecCC-CeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCccc-C---CchhcCCCEE
Confidence 221 2221 2499999999999999999 999999999998 467999753211 1 1234567899
Q ss_pred EeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 227 LFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 227 ~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
+.|.+|.++.+| .-.|.+++++ +++.+++...+.......+++..+.+...|+. +..++++.++++..+.+.|
T Consensus 202 v~S~tK~i~G~~d~~gG~vv~~~--~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t----L~~R~~r~~~~a~~~a~~L 275 (384)
T PRK06434 202 IHSATKYISGHSDVVMGVAGTNN--KSIFNNLVERRKTLGSNPDPIQAYLALRGLKT----LGLRMEKHNKNGMELARFL 275 (384)
T ss_pred EeecccccCCCCCceEEEEecCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc----HHHHHHHHHHHHHHHHHHH
Confidence 999999996433 4568787765 67777777655444555566655555555554 6788889999999999999
Q ss_pred ccCCCCc-ccCCC----------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------------------
Q 015768 306 SPLGEGA-VKGGE----------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC-------------------- 354 (400)
Q Consensus 306 ~~~~~~~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-------------------- 354 (400)
++++.+. +..|. .+-.+.+.+.. .....++.+.| +=..+.+.-|...
T Consensus 276 ~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~-~~~~~~f~~~l-~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~ 353 (384)
T PRK06434 276 RDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS-MEDVHKFIRNL-EIPMVAASLGGVESLITLPVETSHSSLSPEERE 353 (384)
T ss_pred HcCCCccEEECCChHHHHHhcCCCCceEEEEECC-HHHHHHHHHhC-CcceEccCCCCCCeeeECCCccccccCCHHHHH
Confidence 9988642 33221 24455566652 11222333322 1111222222211
Q ss_pred --C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 355 --G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 355 --~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+ .++.+|||++. |+.+++++.|.+||.
T Consensus 354 ~~gi~~~liRlsvGl---Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 354 RLGISDNLVRFSIGI---EDIDDLIKDIENALS 383 (384)
T ss_pred hcCCCcCeEEEEeCc---CCHHHHHHHHHHHhc
Confidence 0 13579999997 667788888888875
No 322
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.88 E-value=9.6e-20 Score=173.99 Aligned_cols=348 Identities=15% Similarity=0.159 Sum_probs=217.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-C-CcE-EEeCChHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-K-SSV-MVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~-~~i-~~~~g~t~ 100 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+..... ...-..+.+.++++.+.+..... . ..+ ++++++++
T Consensus 55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~--~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsE 132 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLH--TLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGAD 132 (459)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccc--ccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHH
Confidence 5578899998875 4444 78999999999887532111 11112456667777776654311 1 134 55589999
Q ss_pred HHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhc-C------------cEEEEeccCCCC-C--CC----CCHHHH---
Q 015768 101 AFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-G------------VTHILVGPCSSK-T--LH----PDADWL--- 155 (400)
Q Consensus 101 a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~~-~--~~----~~~e~l--- 155 (400)
|++.+++... ....+|+....+|++........ + ..+..+ |..+. . +. -+.+.+
T Consensus 133 Ave~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06931 133 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFM-PYPHEYRCPLGIGGEAGVKALTYY 211 (459)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEe-CCCccccccccCCchhHHHHHHHH
Confidence 9999999764 23468999999999987544321 1 012222 22110 0 00 012222
Q ss_pred -HHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEec
Q 015768 156 -EKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS 229 (400)
Q Consensus 156 -~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s 229 (400)
++.+. ....+.+|+++..+...|. ..+.++++++.++|++||+++|.||++.+|...|........+...-+-+
T Consensus 212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt 291 (459)
T PRK06931 212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV 291 (459)
T ss_pred HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEE
Confidence 33332 1123678888766666676 46789999999999999999999999998754443221111121122345
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc---
Q 015768 230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS--- 306 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~--- 306 (400)
++|.+| .|+++|.++.+ +++ +.+.......+++.|+++..++.+.|+.-++ ....++.++..++|.+.|+
T Consensus 292 ~gK~l~-gG~Pi~av~~~---~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~--~~l~~~~~~~G~~l~~~L~~l~ 364 (459)
T PRK06931 292 MSKAVG-GGLPLAVLGIK---KEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKE--ENLAQNAAERGEWLKAQLAELQ 364 (459)
T ss_pred eccccc-CCcceeeeeeH---HHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHH
Confidence 689997 78999998877 443 5444344567888999999999988874221 1233444444455554444
Q ss_pred -cCCCCcccCCCCceEEEeeCCCCC----------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHH
Q 015768 307 -PLGEGAVKGGEGAIYLWARLPEKH----------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 371 (400)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~~~~~~----------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 371 (400)
+++.+.-+... |.++-+.+.... .+ ...+...++ ++|+.+.++.. .++.+|+.++. +++++
T Consensus 365 ~~~~~i~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Gvl~~~~~~--~~~~l~~~Ppl~it~~e 440 (459)
T PRK06931 365 KRYPCIGNVRGR-GLMIGIEIVDERQPADAMGSYPADGELAAAIQKACF-ENGLLLERGGR--NGNVVRLLPPLLITQAE 440 (459)
T ss_pred HhCCCeEeEecC-ceEEEEEEccCcccccccccCCccHHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCCCcCHHH
Confidence 34543334444 555555553210 01 234555554 79999976432 25789999887 89999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 015768 372 CKAAADRLRRGLEELVK 388 (400)
Q Consensus 372 ~~~~~~~l~~~l~~~~~ 388 (400)
+++++++|.+++.++.+
T Consensus 441 id~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 441 CEEFIDRFEQALLAAVK 457 (459)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988765
No 323
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.88 E-value=6.3e-20 Score=165.32 Aligned_cols=286 Identities=20% Similarity=0.156 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccCCCC
Q 015768 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSK 146 (400)
Q Consensus 71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~ 146 (400)
.+.+..+...+++..|. .+.+++++|+.|+..++..|+.+|++|+.+..+|.+....++ ..|++...+ ..+
T Consensus 76 nPt~~~le~~iaal~ga--~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~v-d~~-- 150 (409)
T KOG0053|consen 76 NPTRDVLESGIAALEGA--AHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFV-DVD-- 150 (409)
T ss_pred CCchHHHHHHHHHHhCC--ceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeee-chh--
Confidence 44555556666555553 458889999999999999999999999999999999887664 456676666 222
Q ss_pred CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
+++.+++.+.+++ ++|+++.|.||+..+.| |++|+++|+++|+++++|++++...+ ......+.+|+
T Consensus 151 ----~~~~~~~~i~~~t--~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~----~~pL~lGADIV 217 (409)
T KOG0053|consen 151 ----DLKKILKAIKENT--KAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYN----QDPLPLGADIV 217 (409)
T ss_pred ----hHHHHHHhhccCc--eEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCcccc----cChhhcCCCEE
Confidence 5677888887765 99999999999999999 99999999999999999999885422 22344568899
Q ss_pred EeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 227 LFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 227 ~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
+.|.+|.+|. ..+-.|.++.+. +++.+++...+....+++++...+.+.+.++. +--++++..+++..+++.|
T Consensus 218 ~hSaTKyi~Ghsdvi~G~iv~n~--~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt----l~lRi~~~~ena~~~A~~L 291 (409)
T KOG0053|consen 218 VHSATKYIGGHSDVIGGSVVLNS--EELASRLKFLQEDLGWCEDPFDLFLLSRGLKT----LHLRINKHSENALKIALLL 291 (409)
T ss_pred EEeeeeeecCCcceeeeEEecCc--HHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch----hhhhHHHHHHHHHHHHHHh
Confidence 9999999963 446678888865 89999999888877888888887776666654 4455667777777777888
Q ss_pred ccCCCCc-ccCC------------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----------
Q 015768 306 SPLGEGA-VKGG------------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----------- 355 (400)
Q Consensus 306 ~~~~~~~-~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----------- 355 (400)
+..+.++ ++.| -|+.+..+.... .+..+++..|. =.-....-|..+.
T Consensus 292 e~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~--~~a~kf~~~LK-~~~~a~SlG~~eSL~~~p~~mth~ 368 (409)
T KOG0053|consen 292 EAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNE--EHAKKFYDALK-LFTKAPSLGGNESLAEPPAIMTHA 368 (409)
T ss_pred hhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCH--HHHHHHHHhhh-hhhcccCcCccchhhcchhhhccC
Confidence 7765532 2211 122222222221 13444544431 1112233333321
Q ss_pred -----------CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 356 -----------CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 356 -----------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++-+|+|++. |+++.+++.|.+|++..
T Consensus 369 ~~~e~~~~~Gi~~~LVRvSVGi---Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 369 SELEEREKFGIDPNLVRVSVGI---EDIEDLIKDFQQALEKA 407 (409)
T ss_pred CCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHHhh
Confidence 25689999996 77888888888888764
No 324
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.87 E-value=4.1e-20 Score=156.30 Aligned_cols=331 Identities=16% Similarity=0.107 Sum_probs=228.0
Q ss_pred CCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 30 KNAVSLAQGV-VYWQPPKMAMEKVKELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 30 ~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
+.+++|+.++ ..+..+|+++++-.+++++...+.-+ -.-|...+.+.+...+++.++ .++.++.+++-.|+..++
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--rED~ilypscfdANag~f 144 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--REDTILYPSCFDANAGAF 144 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--CCceEEeccccccchHHH
Confidence 6788998876 66778999999999998874322111 124566677777777776666 577888888889999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
.++..|.|.|+-.+..|.+..+.++.+. .+ + ++|+-.++..+.+ +.+.|+|+-...-...|.+.|
T Consensus 145 eail~pedAvfSDeLNhASIIdGirLck----ry------~-h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP-- 211 (417)
T KOG1359|consen 145 EAILTPEDAVFSDELNHASIIDGIRLCK----RY------R-HVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP-- 211 (417)
T ss_pred HHhcChhhhhhccccccchhhhhhHHHh----hh------c-cchhHHHHHHHHHhhhheEEEEEecceeccCCCccc--
Confidence 9999999999999999988888776544 11 1 3456566665542 222466665566678999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCCCc-----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH-----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+++|.+++++||.++++||+|+.+.++...- .....+.+++.++++|++| |.-.||..++ +.++.-++.
T Consensus 212 -l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp---~~li~llrq 285 (417)
T KOG1359|consen 212 -LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGP---KPLISLLRQ 285 (417)
T ss_pred -HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCC---hhHHHHHHh
Confidence 8899999999999999999999777654321 1223677899999999996 4445999999 788887776
Q ss_pred hhccCCcC--ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768 260 VQDNIPIC--ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 337 (400)
Q Consensus 260 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (400)
..+..-|+ .++....++.+++.- .-.-.+.....+.+.+++++..+.-+. .+.+.. .....+-+... .-..++.
T Consensus 286 r~RpylFSnslppavV~~a~ka~dl-lm~s~~~i~~~~a~~qrfr~~me~aGf-tIsg~~-hPI~pv~lGda-~lA~~~a 361 (417)
T KOG1359|consen 286 RSRPYLFSNSLPPAVVGMAAKAYDL-LMVSSKEIQSRQANTQRFREFMEAAGF-TISGAS-HPICPVMLGDA-RLASKMA 361 (417)
T ss_pred cCCceeecCCCChhhhhhhHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCc-eecCCC-CCccceecccH-HHHHHHH
Confidence 55433333 332222233333321 001134455566777888888877665 555432 22233333221 1355778
Q ss_pred HHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+|+ +.||+|..-+++. +...||+.++. +++||++++++++.++.+.+
T Consensus 362 d~lL-k~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 362 DELL-KRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred HHHH-hcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 8888 7899997544443 34578998887 89999999999999887654
No 325
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.87 E-value=1.1e-18 Score=161.36 Aligned_cols=323 Identities=12% Similarity=0.083 Sum_probs=220.4
Q ss_pred HHHHHH-HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCcc
Q 015768 46 KMAMEK-VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124 (400)
Q Consensus 46 ~~v~~a-~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~ 124 (400)
..+.++ +.+.+... -.|+.++...++++++++++ | .+.++.|+++|.|++.+....++|||.| +.+.|+
T Consensus 50 ~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~va~~~----G--~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f 119 (450)
T TIGR02618 50 NAMSDKQWAGLMMGD--EAYAGSRNFYHLERTVRELY----G--FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYF 119 (450)
T ss_pred HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHHHHHHH----C--CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeH
Confidence 555555 44443322 24878888899999999988 4 4679999999999998877778999977 667775
Q ss_pred chhHH-HHhcCcEEEEeccCC---------CCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCC-CccCCCHHHHHHHHH
Q 015768 125 NSYMS-FQMTGVTHILVGPCS---------SKTLHPDADWLEKTLETKP--TPKLVSVVNPGNP-SGTYIPERLLKRISD 191 (400)
Q Consensus 125 ~~~~~-~~~~g~~~~~~~~~~---------~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~np-tG~~~~~~~l~~i~~ 191 (400)
..... +...|+.++-+ +.+ +..+++|++.+++.+++.. ..++|.+++++|. .|.++|.++++++.+
T Consensus 120 ~Tt~ahIe~~Gav~vDi-~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~e 198 (450)
T TIGR02618 120 TTTRYHQEKNGATFVDI-IIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRE 198 (450)
T ss_pred HHHHHHHHhCCeEEEee-ecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHH
Confidence 55544 78888865555 443 3456889999999998532 2357777878775 589999999999999
Q ss_pred HHHHcCCEEEEcccccccc----------cCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 192 LCKAAGSWLVVDNTYEYFM----------YDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 192 l~~~~~~~li~D~a~~~~~----------~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
+|++||+.+|.|.++.... +.+.+. .......+.++.|..|..+++- .|+++.++ +++++++
T Consensus 199 lA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~--GG~l~~~d--~~l~~k~ 274 (450)
T TIGR02618 199 LCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI--GGFLCMND--DEMFQSA 274 (450)
T ss_pred HHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC--ceEEEeCC--HHHHHHH
Confidence 9999999999999987521 111111 0001234568889999886541 37777676 8999888
Q ss_pred HHhhccC----CcC-ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCC----
Q 015768 258 LKVQDNI----PIC-ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPE---- 328 (400)
Q Consensus 258 ~~~~~~~----~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~---- 328 (400)
+...... +++ .+.....+++..|.+..+ ..+.++-..+.++|.+.|.+.|. .+..|.+++.++++...
T Consensus 275 r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~--~~y~~~r~~~a~~La~~L~~~Gv-pv~~p~ggh~V~vda~~~lph 351 (450)
T TIGR02618 275 KELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD--YEYIEHRVKQVRYLGDKLKAAGV-PIVEPVGGHAVFLDARRFLPH 351 (450)
T ss_pred HHHhhhcCCccccCchhhhhHHHHHHHHHHhhh--HHHHHHHHHHHHHHHHHHHHCCC-cccCCCCcceEEEEhHHhCCC
Confidence 7764321 222 244455555556664222 23344444567888888888854 66667778888876432
Q ss_pred ---CCCCHHHHHHHHHHhcCeEEeC-CCccCC------------CCeEEEEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768 329 ---KHLDDFEVVRWLAHRHGVVVIP-GGACGC------------RGHLRISFGG--LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 329 ---~~~~~~~~~~~l~~~~gi~v~~-g~~~~~------------~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~ 386 (400)
.......++.+|..+.||--.. |+...+ -..+|+++.+ -|.+-++...++|....++-
T Consensus 352 ~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 352 IPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred CChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 1234677888888889987543 332211 1479999886 57788888888887777653
No 326
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.86 E-value=1.7e-19 Score=167.76 Aligned_cols=315 Identities=12% Similarity=0.069 Sum_probs=202.1
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEe-CChHHHHHHHHHHhcCCCCEEEEeC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVT-AGANQAFVNIVLTLCDAGDSVVMFA 120 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~-~g~t~a~~~~~~~l~~~gd~vlv~~ 120 (400)
..|++|++++......- ...........++.+.+.+.+.+.++++. .+|+|+ +|+|.+++.++.++..+ +.+++..
T Consensus 13 ~~~~~v~~a~~~~~~~~-~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~ 90 (361)
T TIGR01366 13 KVRLEQLQALTTTAASL-FGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSF 90 (361)
T ss_pred CCCHHHHHHHHhcCccc-cccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEec
Confidence 45788988876432111 10011233345566666666666668754 478886 66999999999999743 3444444
Q ss_pred CCccc-hhHHHHhc--CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 121 PYYFN-SYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 121 p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
..|.. +.+.++.. +.++..+ +.+. +..++. .+.++ +++|.+++.+|.||.+.| +++| ++++|
T Consensus 91 G~~~~~~~~~a~~~~~~~~~~~~-~~~~-~~~~~~-----~~~~~--~~lV~~~h~et~tG~~~p---i~~I---~~~~g 155 (361)
T TIGR01366 91 GEFSSKFAKAVKLAPWLGEPIIV-TADP-GSAPEP-----QADPG--VDVIAWAHNETSTGVAVP---VRRP---EGSDD 155 (361)
T ss_pred CHHHHHHHHHHHhhhccCCceEE-ecCC-CCCCCC-----ccCCC--CCEEEEcccCCccceecc---cccc---cccCC
Confidence 45532 33444432 2255555 4432 322222 23344 499999999999999999 5555 47899
Q ss_pred CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----------------
Q 015768 198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---------------- 261 (400)
Q Consensus 198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~---------------- 261 (400)
+++++|.+++.. ..+.... ..+++++|.+|++|.+| .++.++.+ +++.+++....
T Consensus 156 ~~~iVDavqs~g---~~~idv~--~~D~~~~s~~K~lg~~~-Gl~~~~~s---~~~~~~~~~~~~~~~~~p~~~d~~~~~ 226 (361)
T TIGR01366 156 ALVVIDATSGAG---GLPVDIA--ETDVYYFAPQKNFASDG-GLWLAIMS---PAALERIEAIAASGRWVPEFLSLPTAV 226 (361)
T ss_pred CeEEEEcCcccc---CCCCCHH--HCCEEEEEchhhcCCCC-ceEEEEEC---HHHHhhhhcccCCCCCCchhhhHHHHH
Confidence 999999999843 3333332 26789999999998654 25555556 45555544210
Q ss_pred -----ccCCcCccHHHHHHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHHhccCCCCcccC--C--CCceEEEeeCCCCC
Q 015768 262 -----DNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKG--G--EGAIYLWARLPEKH 330 (400)
Q Consensus 262 -----~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~--~~~~~~~~~~~~~~ 330 (400)
..+.++++....+++..+++.-. . ..+.+.++++++.+++++.|++.+..+... + .+.....+.+++.
T Consensus 227 ~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g- 305 (361)
T TIGR01366 227 DNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDD- 305 (361)
T ss_pred hccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCc-
Confidence 12345566665556666665321 1 256777889999999999999988644332 1 1223344555543
Q ss_pred CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 331 LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 331 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.+.+++...| +++||.+.++......+.+|+|+.. +|.+|++.+++.|++++++
T Consensus 306 ~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 306 IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 4788888877 4789999876433346789999888 9999999999999998765
No 327
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.5e-19 Score=158.33 Aligned_cols=290 Identities=19% Similarity=0.212 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCC
Q 015768 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSK 146 (400)
Q Consensus 71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~ 146 (400)
+...+.+.+++..+.| .-.-+.+.+++.|+..++..+.++||+|+...--|.+... .++.+|+++.++ ..
T Consensus 61 NPT~~vlE~RiAaLEG--G~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv-d~--- 134 (426)
T COG2873 61 NPTTDVLEERIAALEG--GVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV-DP--- 134 (426)
T ss_pred CchHHHHHHHHHHhhc--chhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEe-CC---
Confidence 3444555555555543 1223667888999999999999999999999888877554 457889999988 32
Q ss_pred CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
.|+|.+++.+++++ |+|+++...||.+.+.| +++|+++|++||+++|+|.....- .-..+.+.+.+|+
T Consensus 135 ---~d~~~~~~aI~~nT--kavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atp----yl~rP~~hGADIV 202 (426)
T COG2873 135 ---DDPENFEAAIDENT--KAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATP----YLCRPIEHGADIV 202 (426)
T ss_pred ---CCHHHHHHHhCccc--ceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcc----eecchhhcCCCEE
Confidence 26899999999998 99999999999999999 999999999999999999998732 1233456788899
Q ss_pred EeccccccCCCcceeEEEEccCCcHHHHH--HHHHh-----------------------------hccCCcCccHHHHHH
Q 015768 227 LFSFSKAYGMMGWRVGYIAYPSEVEGFAT--QLLKV-----------------------------QDNIPICASIISQHL 275 (400)
Q Consensus 227 ~~s~sK~~g~~g~~~G~i~~~~~~~~~~~--~l~~~-----------------------------~~~~~~~~~~~~~~~ 275 (400)
+.|++|++|..|.-+|-++.+...-++.. ++..+ .+-..-+.+++....
T Consensus 203 vHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl 282 (426)
T COG2873 203 VHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFL 282 (426)
T ss_pred EEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHH
Confidence 99999999878887777665542111110 00000 000112233333333
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc------------------CCCCceEEEeeCCCCCCCHHHHH
Q 015768 276 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK------------------GGEGAIYLWARLPEKHLDDFEVV 337 (400)
Q Consensus 276 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 337 (400)
....| +-+.-+++++.+|+..+.+.|++++.+.++ +...+-.+.+.+........++.
T Consensus 283 ~lqGl----ETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi 358 (426)
T COG2873 283 LLQGL----ETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFI 358 (426)
T ss_pred HHhch----hhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHH
Confidence 33333 335667889999999999999987763322 11123456666665432233443
Q ss_pred HHH------H---HhcCeEEeCCCccC-------------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 338 RWL------A---HRHGVVVIPGGACG-------------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 338 ~~l------~---~~~gi~v~~g~~~~-------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+.| . +.+-+.+-|.+.-+ .++.||+|++. |++++.++.|++++++
T Consensus 359 ~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI---Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 359 DALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI---EDIDDIIADLEQALEA 425 (426)
T ss_pred HHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc---CCHHHHHHHHHHHHhc
Confidence 322 1 01224444543321 26799999997 7778888888888864
No 328
>PRK06148 hypothetical protein; Provisional
Probab=99.86 E-value=5.7e-19 Score=183.03 Aligned_cols=345 Identities=12% Similarity=0.105 Sum_probs=224.7
Q ss_pred hcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCC-CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSIS-KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
.+|+.++||..+...++ .+|+|.+++.+.+.+.... .| ..+...++++.|.+...-..+.++|+++|++|++.
T Consensus 621 ~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~-----~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~ 695 (1013)
T PRK06148 621 NRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRY-----LHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSL 695 (1013)
T ss_pred CCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCc-----CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence 55788999988875664 7899999999998763211 12 23345566666665543223689999999999999
Q ss_pred HHHHhc--CCCCEEEEeCCCccchhHHHHh-cC------------cEEEEeccCC--CC-CCC-CC-------HHHHHHh
Q 015768 105 IVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG------------VTHILVGPCS--SK-TLH-PD-------ADWLEKT 158 (400)
Q Consensus 105 ~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g------------~~~~~~~~~~--~~-~~~-~~-------~e~l~~~ 158 (400)
+++... ....+|+....+|++....... .+ ..+..+ +.. .. .++ .+ .+.+++.
T Consensus 696 AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 774 (1013)
T PRK06148 696 ALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVA-EVPDSYRGPERWPDAEHGRRFAESVAEQ 774 (1013)
T ss_pred HHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEc-CCCCccccCCCCChhhhHHHHHHHHHHH
Confidence 999875 2346899999999887643211 11 011111 110 00 011 01 1345554
Q ss_pred hc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-ccccCCCcEEEEecccc
Q 015768 159 LE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HCCVEGDHVVNLFSFSK 232 (400)
Q Consensus 159 l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~~i~~~s~sK 232 (400)
+. ....+.+++++..+...|. ..|.++++++.++|++||+++|.||++.+|...|.. ......+...-+.+++|
T Consensus 775 i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK 854 (1013)
T PRK06148 775 IAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGK 854 (1013)
T ss_pred HHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecc
Confidence 43 1233678888765555565 568889999999999999999999999877544431 11111222222446689
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHh-hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----
Q 015768 233 AYGMMGWRVGYIAYPSEVEGFATQLLKV-QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP---- 307 (400)
Q Consensus 233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 307 (400)
.+| .|+++|.++++ +++.+.+... ....+++.|+++..++.+.|+..++ ++..++.++..++|++.|++
T Consensus 855 ~lg-gG~Plgav~~~---~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~ 928 (1013)
T PRK06148 855 PIG-NGHPMGAVVTT---REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED--EDLQRNALEIGNYLLAGLRELQDR 928 (1013)
T ss_pred ccc-CCcceEEEEEc---HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHh
Confidence 998 88999999998 7887776532 2346888999999999998875221 23445555666666666654
Q ss_pred CCCCcccCCCCceEEEeeCCCCC----CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 308 LGEGAVKGGEGAIYLWARLPEKH----LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
++.+.-+... |.++-+.+.... .+ ...+...++ ++||++.+... ..+.+||.+.. +|++++++++++|
T Consensus 929 ~~~i~~VrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~-~~Gvl~~~~g~--~~~vlr~~Ppl~it~~~id~~l~~l 1004 (1013)
T PRK06148 929 FDIIGDVRGM-GLFLGIELVTDRKTKAPATAIARYVKNGAR-ERGILIGTEGP--HDNVLKIRPPLIFSRADADHLLEVL 1004 (1013)
T ss_pred CCCceEEeee-ceEEEEEecCCccccCccHHHHHHHHHHHH-hCCeEEeccCC--CCCEEEEeCCccCCHHHHHHHHHHH
Confidence 3433333344 566656653211 01 234666665 79999976432 25789999887 8999999999999
Q ss_pred HHHHHHHh
Q 015768 380 RRGLEELV 387 (400)
Q Consensus 380 ~~~l~~~~ 387 (400)
.+++.++.
T Consensus 1005 ~~~l~~~~ 1012 (1013)
T PRK06148 1005 DDVLAAAL 1012 (1013)
T ss_pred HHHHHHHh
Confidence 99998753
No 329
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.86 E-value=7.1e-19 Score=167.45 Aligned_cols=364 Identities=15% Similarity=0.132 Sum_probs=217.0
Q ss_pred HHHHhhhcCchHHH---HHHH-HH---hcCCCeEEcCCCC--CCCC-CcHHHHH--HHHHhhcCCCCCCCCCCCCcHHHH
Q 015768 7 LAKRALETEMPIMV---QIQE-LV---RGAKNAVSLAQGV--VYWQ-PPKMAME--KVKELVWDPSISKYGADEGLPELR 74 (400)
Q Consensus 7 ~~~~~~~~~~~~~~---~~~~-~~---~~~~~~i~~~~~~--~~~~-~~~~v~~--a~~~~~~~~~~~~y~~~~g~~~~~ 74 (400)
+|+++.....+.+. +-.- ++ .+|+.++||..+. ..++ .+|++.+ ++.+.+.+-............+..
T Consensus 15 ~~~~~~~~~~p~~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~ 94 (443)
T PRK08297 15 LARHILVDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEM 94 (443)
T ss_pred HHHHHhhcCCCcceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHH
Confidence 56666655544441 2111 11 2688899998775 4454 7899999 998888652110000001112344
Q ss_pred HHHHHHHHhhcC-CCCCcEEEeCChHHHHHHHHHHhc----------C---C-CCEEEEeCCCccchhHHHHh-cCcEE-
Q 015768 75 DALVKKLNQENK-LYKSSVMVTAGANQAFVNIVLTLC----------D---A-GDSVVMFAPYYFNSYMSFQM-TGVTH- 137 (400)
Q Consensus 75 ~~~a~~l~~~~~-~~~~~i~~~~g~t~a~~~~~~~l~----------~---~-gd~vlv~~p~~~~~~~~~~~-~g~~~- 137 (400)
.++++.+.+..+ -..+.++|+++|++|++.+++... . + ..+|+....+|++....... .|...
T Consensus 95 ~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~ 174 (443)
T PRK08297 95 ARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPR 174 (443)
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCccc
Confidence 446666655432 124689999999999999999873 1 1 25799999999987644332 22110
Q ss_pred --EEec-------cCCCC-----CCC---C------CHHHHHHhhcc-CCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHH
Q 015768 138 --ILVG-------PCSSK-----TLH---P------DADWLEKTLET-KPTPKLVSVVNPGNPSGT-YIPERLLKRISDL 192 (400)
Q Consensus 138 --~~~~-------~~~~~-----~~~---~------~~e~l~~~l~~-~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l 192 (400)
.... |...- +.. . +++.+++.+.. ...+.+|+++..+...|. .+|.+++++|.++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~l 254 (443)
T PRK08297 175 KTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMREL 254 (443)
T ss_pred ccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHH
Confidence 0000 00000 000 0 23455566652 234688888866666675 4788999999999
Q ss_pred HHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH-HHH-HhhccCCcCc
Q 015768 193 CKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT-QLL-KVQDNIPICA 268 (400)
Q Consensus 193 ~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~-~l~-~~~~~~~~~~ 268 (400)
|++||+++|.||++.+|...|...... .-..+++ +++|.++ .| |.+.++. ..+... .+. ......+++.
T Consensus 255 c~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv--~~gK~l~-~~---a~l~~~~-i~~~~~~~~~~~~~~~~T~~g 327 (443)
T PRK08297 255 CDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIV--AFGKKTQ-VC---GIMAGRR-VDEVEDNVFAVSSRINSTWGG 327 (443)
T ss_pred HHHcCCEEEEechhhccCccchHHHHHhcCCCCCEE--Eeccccc-cc---ceecchH-HHHhhhhhccCccccCCCCCc
Confidence 999999999999998775544321111 1122344 5689874 22 4444331 001211 111 1124567888
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCc-ccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (400)
++++..++.+.|+...+ ++..++.+++.+++.+.|++ .+.+. .+.+. |.++.+.++... ....+...++ +
T Consensus 328 npl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~-~ 402 (443)
T PRK08297 328 NLVDMVRARRILEVIEE--DGLVENAARQGEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTA-DRDEVIRRLW-E 402 (443)
T ss_pred cHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCHH-HHHHHHHHHH-H
Confidence 99999998888874211 23444455555555555544 44321 33344 677777775321 2456777776 8
Q ss_pred cCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 344 HGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 344 ~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
+||++.|+. .+.+||+++. ++++++++++++|.+++.++
T Consensus 403 ~Gvl~~~~~----~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 403 EGVLVLPCG----ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCEEEecCC----CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 999998743 3679998776 79999999999999999865
No 330
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.86 E-value=6.2e-19 Score=150.31 Aligned_cols=358 Identities=18% Similarity=0.197 Sum_probs=253.8
Q ss_pred hcCchHHHHHHHHHhcC--CCeEEcCCCC--CCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 13 ETEMPIMVQIQELVRGA--KNAVSLAQGV--VYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 13 ~~~~~~~~~~~~~~~~~--~~~i~~~~~~--~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
.........+.+.+.++ +-.++|+.|. .+- |.--++++.....+.+.. ...|-+..|.+.++.+.++.+...
T Consensus 11 ~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~ 90 (410)
T KOG1412|consen 11 VAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGA 90 (410)
T ss_pred cCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCC
Confidence 34455666777666554 4478888864 222 222334444443343322 456778899999999999886433
Q ss_pred c--CCCCCcEEE--eCChHHHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCc-EEEEecc-CCCCCCCCCHHHHH
Q 015768 85 N--KLYKSSVMV--TAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV-THILVGP-CSSKTLHPDADWLE 156 (400)
Q Consensus 85 ~--~~~~~~i~~--~~g~t~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~-~~~~~~~-~~~~~~~~~~e~l~ 156 (400)
. .++.++++- +-+||.|+.+...-+.. +..+|.+..|+|.++..+++..|+ .+..+ + .+.+.-.+|++.+.
T Consensus 91 ~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y-~yWd~~~k~~d~e~~L 169 (410)
T KOG1412|consen 91 DSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATY-PYWDAENKCVDLEGFL 169 (410)
T ss_pred CchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeee-eeecCCCceecHHHHH
Confidence 2 123444332 35677888888877642 356799999999999999999995 44444 3 33344567988888
Q ss_pred HhhccCCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-------ccCCCcEEEEe
Q 015768 157 KTLETKPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-------CVEGDHVVNLF 228 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-------~~~~~~~i~~~ 228 (400)
..|+..+.-..+++..+ +||||+-++.|.+.+|+++.++.+.+.+.|-+|.+|+.+..... ...+...+++-
T Consensus 170 sdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~Q 249 (410)
T KOG1412|consen 170 SDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQ 249 (410)
T ss_pred HHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEh
Confidence 88886653355555544 99999999999999999999999999999999999887654221 11244578899
Q ss_pred ccccccCCCcceeEEE--EccCCcHHH----HHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHH
Q 015768 229 SFSKAYGMMGWRVGYI--AYPSEVEGF----ATQLLKVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDLVR 296 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i--~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~ 296 (400)
||+|.+|+-+-|+|.+ +.++ +.. ..++....+..-.+++..+.......|...+ +| ++.+..++.+
T Consensus 250 SFaKNfGlYneRvGnltvv~~n--~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~ 327 (410)
T KOG1412|consen 250 SFAKNFGLYNERVGNLTVVVNN--PAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKK 327 (410)
T ss_pred hhhhhcccccccccceEEEecC--hhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 3443 443 3445555555666788888898888888632 33 4566788888
Q ss_pred HHHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHH
Q 015768 297 NREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCK 373 (400)
Q Consensus 297 ~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~ 373 (400)
.+..|++.|..++. ..-+..+.|+|.+-.+.+ ..++.|.+++.|++.+.+ |++++.+....++
T Consensus 328 MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp------~qV~~li~~h~vyLl~~G--------RInisGLN~~Nve 393 (410)
T KOG1412|consen 328 MRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTP------AQVDHLIENHKVYLLSDG--------RINISGLNMKNVE 393 (410)
T ss_pred HHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCH------HHHHHHHHhceEEEecCC--------cEeeeccccccHH
Confidence 89999998888743 233345568888877652 446678889999998765 9999887788899
Q ss_pred HHHHHHHHHHHHHh
Q 015768 374 AAADRLRRGLEELV 387 (400)
Q Consensus 374 ~~~~~l~~~l~~~~ 387 (400)
...+++.++++.+.
T Consensus 394 yVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 394 YVAKAIDETVRAIK 407 (410)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999998888754
No 331
>PLN02263 serine decarboxylase
Probab=99.86 E-value=9.3e-18 Score=157.13 Aligned_cols=319 Identities=12% Similarity=0.027 Sum_probs=223.2
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCC---CcHHHHHHHHHHHHhhcCCCCC--cEEEeCChHHHHHHHHHHhcC--CCCEEEE
Q 015768 46 KMAMEKVKELVWDPSISKYGADE---GLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCD--AGDSVVM 118 (400)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~~~---g~~~~~~~~a~~l~~~~~~~~~--~i~~~~g~t~a~~~~~~~l~~--~gd~vlv 118 (400)
+..+..+.....++...++..+. +..++++.+.+|+.+.+|.+++ .-++|+|||+++..++.+.++ +...+++
T Consensus 104 ~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~ 183 (470)
T PLN02263 104 YGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYA 183 (470)
T ss_pred hhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEE
Confidence 34444444444443222232222 5789999999999999998753 468899999999999988764 3347889
Q ss_pred eCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 119 FAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
++-.|+++..+++.+|++++.+ |.++++ .+|++.|++.+..++ .|-+|+.+.++.++|.+-| +.+|.++|+++|
T Consensus 184 S~~aH~Sv~KAa~llgi~~~~V-p~d~~g-~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g 258 (470)
T PLN02263 184 SRESHYSVFKAARMYRMECVKV-DTLVSG-EIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECG 258 (470)
T ss_pred cCCccHHHHHHHHhcCCcceEe-ccCCCC-cCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcC
Confidence 9999999999999999999999 987654 799999999887443 2456666678999999999 899999999999
Q ss_pred C-----EEEEcccccccccC---CC-CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------
Q 015768 198 S-----WLVVDNTYEYFMYD---GR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ------- 261 (400)
Q Consensus 198 ~-----~li~D~a~~~~~~~---~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~------- 261 (400)
+ |+++|.+|+++... .. ++.+ ....+=+..+.||+++ ....+|.+..++ ...+.+....
T Consensus 259 ~~~~~iwlHVDAA~GG~~lPf~~~~~~~df-~~~vDSIsvD~HK~l~-~P~~cgvll~R~---~~~~~~~~~~~Yl~~~d 333 (470)
T PLN02263 259 FSQDRFYIHCDGALFGLMMPFVKRAPKVTF-KKPIGSVSVSGHKFVG-CPMPCGVQITRM---EHINVLSSNVEYLASRD 333 (470)
T ss_pred CccCCeeEEEeccchhhHhhhcccccccCC-CcCccEEEECCccccC-CCcCEEEEEEeh---hhHhhhccChHhhCCCC
Confidence 6 99999999876541 11 1111 1224556678999986 668899999884 3333332110
Q ss_pred ccCCcCc---cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHH
Q 015768 262 DNIPICA---SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVR 338 (400)
Q Consensus 262 ~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (400)
.....+- ..+..++....+ |.+.+.++.++..++++++.+.|++.+...+..|. .+.+.++.+. . +.
T Consensus 334 ~ti~gSR~g~~al~lW~~L~~~--G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~-s~~V~f~~p~----~-~~-- 403 (470)
T PLN02263 334 ATIMGSRNGHAPIFLWYTLNRK--GYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNEL-SSTVVFERPK----D-EE-- 403 (470)
T ss_pred CCcCCCCCcHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCC-ceEEEEecCc----h-HH--
Confidence 0111111 233334333333 56778999999999999999999998775555565 5666665442 1 11
Q ss_pred HHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccCcc
Q 015768 339 WLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGMV 392 (400)
Q Consensus 339 ~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~ 392 (400)
. .+|..+.. .++.+++++.. .+.+.++++++.|++.......++..
T Consensus 404 --~-~~gW~L~~-----~~~~~Hivvmphv~~~~id~fi~DL~~~~~~~~~~~~~ 450 (470)
T PLN02263 404 --F-VRRWQLAC-----QGNIAHVVVMPSVTIEKLDYFLKELVEKRSTWYPDGKV 450 (470)
T ss_pred --h-hcceEEcc-----CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhhhhhcccc
Confidence 1 35666654 23568888665 68899999999999998876544433
No 332
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.85 E-value=3.6e-19 Score=168.77 Aligned_cols=336 Identities=10% Similarity=0.054 Sum_probs=204.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHh-hcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKEL-VWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~-~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~ 100 (400)
.+|+.++||..+. ..++ .+|++++++.+. ..... ...+. .....++.+.+.+.+.+...-..+.++|++++++
T Consensus 55 ~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~-~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE 133 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALG-NFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD 133 (464)
T ss_pred CCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCC-cHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence 5578899998876 4444 789999999874 23211 11121 1112233333333222232222378999999999
Q ss_pred HHHHHHHHhcC--------------------------CC---CEEEEeCCCccchhHHHHh-cCcE-----------EEE
Q 015768 101 AFVNIVLTLCD--------------------------AG---DSVVMFAPYYFNSYMSFQM-TGVT-----------HIL 139 (400)
Q Consensus 101 a~~~~~~~l~~--------------------------~g---d~vlv~~p~~~~~~~~~~~-~g~~-----------~~~ 139 (400)
|++.+++.... +| .+|+....+|++....... .|.. ...
T Consensus 134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~ 213 (464)
T TIGR00699 134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ 213 (464)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence 99999997731 11 2799999999887644322 2211 111
Q ss_pred eccCCCCC--C-----------CCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcc
Q 015768 140 VGPCSSKT--L-----------HPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDN 204 (400)
Q Consensus 140 ~~~~~~~~--~-----------~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~ 204 (400)
+ |..... + .-+++.+++.+.. ...+.+|+++..+...|.+. +.++++++.++|++||+++|+||
T Consensus 214 ~-p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DE 292 (464)
T TIGR00699 214 A-PFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDE 292 (464)
T ss_pred c-CCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEee
Confidence 1 111000 0 0135667777752 23368888887677778765 78999999999999999999999
Q ss_pred cccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHh
Q 015768 205 TYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280 (400)
Q Consensus 205 a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 280 (400)
++.++...|..+.. .....|+ .+++|.+|.. |+++.+ +.+ ..........+++.++++..++.+.|
T Consensus 293 V~tGfGrtG~~fa~e~~gv~~~PDi--~t~gK~lg~g----G~~~~~---~~~-~~~~~~~~~~T~~gnp~~~aaa~a~L 362 (464)
T TIGR00699 293 VQTGVGATGKFWAHEHWNLDDPPDM--VTFSKKFQTA----GYFFHD---PAF-RPNKPYRQFNTWMGDPSRALILREII 362 (464)
T ss_pred eeeCCCCCcchhHHHhcCCCCCCCE--EEehhhhccC----Cccccc---hhc-cCCCCcccccCCCCCHHHHHHHHHHH
Confidence 99877554432111 1111333 4668998523 444443 211 11112234567888998888888777
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhcc----CC-CCcccC--CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCc
Q 015768 281 QTGPEWVTERVKDLVRNREIIREALSP----LG-EGAVKG--GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA 353 (400)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 353 (400)
+..++ .+..++..+..+++++.|++ ++ .+..+. .. |.++-+.++... ....+...++ ++|+++.+.
T Consensus 363 ~~l~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~-Glm~gie~~~~~-~~~~i~~~~~-~~Gvl~~~~-- 435 (464)
T TIGR00699 363 QEIKR--KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGR-GTFIAWDTPDEA-KRDKLLKKAR-NNGVNIGGC-- 435 (464)
T ss_pred HHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCe-EEEEEEecCCHH-HHHHHHHHHH-HCCcEEecC--
Confidence 64221 23444555555555555554 44 222232 33 777777775321 2456776665 789999763
Q ss_pred cCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 354 CGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 354 ~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+.+.+||.+.. +++++++.++++|.+++
T Consensus 436 --g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 436 --GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred --CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 35789999887 89999999999998864
No 333
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.85 E-value=9.4e-18 Score=155.63 Aligned_cols=308 Identities=13% Similarity=0.082 Sum_probs=212.0
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-HHhcCcEEEEec
Q 015768 63 KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVG 141 (400)
Q Consensus 63 ~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~ 141 (400)
.|+.++...++++++++++ | .+.++.++++|.|++++....++|||.| +..+|...... +...|+..+-+
T Consensus 73 ~Yagd~s~~~LE~~vAe~l----G--~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi- 143 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY----G--FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDI- 143 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH----C--CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEee-
Confidence 4777788899999999998 5 4569999999999999877678999965 55555554433 67788754433
Q ss_pred cC---------CCCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 142 PC---------SSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 142 ~~---------~~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~npt-G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
.. ++..+++|++.+++.+++.+ .++++.++.++|.. |...|.++++++.++|++||+.+|.|.++...
T Consensus 144 ~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~g 223 (460)
T PRK13237 144 IIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVE 223 (460)
T ss_pred ecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhc
Confidence 21 24567899999999998532 23456667777877 79999999999999999999999999998743
Q ss_pred c----------cCCCCcc----ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----Cc-CccH
Q 015768 210 M----------YDGRKHC----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI----PI-CASI 270 (400)
Q Consensus 210 ~----------~~~~~~~----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~----~~-~~~~ 270 (400)
. +.+.+.. ....-.+..+.|++|.++.+ . .|++++++ ++++++++...-.+ ++ +.+.
T Consensus 224 na~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~-~-GG~i~t~D--~eL~~~~r~~~~~~eG~~tygg~~g 299 (460)
T PRK13237 224 NAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVN-I-GGFLAMND--EELFDEAKELVVVYEGMPSYGGMAG 299 (460)
T ss_pred ChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCC-C-ceEEEECC--HHHHHHHHHhccccCCCcCCCChhh
Confidence 1 1111110 00123567788999998643 1 48888887 89999988764221 22 2333
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC-------CCCCCHHHHHHHHHHh
Q 015768 271 ISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP-------EKHLDDFEVVRWLAHR 343 (400)
Q Consensus 271 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~ 343 (400)
-...+++..|.+..+ ..+.+.-..+.++|.+.|.+.|. .+..|.+|.-++++.. ........++.+|..+
T Consensus 300 rd~~alAvgl~E~~~--~~y~~~ri~~~~~l~~~L~~~Gv-pv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~ 376 (460)
T PRK13237 300 RDMEAMAIGIEESVQ--YEYIEHRVGQVRYLGEKLLAAGV-PIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIE 376 (460)
T ss_pred hHHHHHHhHHHhhch--HHHHHHHHHHHHHHHHHHHHCCC-ceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHH
Confidence 345555555654332 25555556677888899888775 5666777887777532 2223477888888888
Q ss_pred cCeEEeC-CCcc-C-----C------CCeEEEEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768 344 HGVVVIP-GGAC-G-----C------RGHLRISFGG--LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 344 ~gi~v~~-g~~~-~-----~------~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~ 386 (400)
.||--.. |+.. + + -..+|+++.+ -|.+-++...++|....++-
T Consensus 377 ~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 377 SGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred hCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 9987642 2221 1 0 1479999886 57788888888887777653
No 334
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.85 E-value=4.7e-18 Score=142.41 Aligned_cols=333 Identities=17% Similarity=0.179 Sum_probs=224.2
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC--------CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG--------ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--------~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
++|+++-=.-.--.+++..+++.+.-+..+.-.|. ..+-...+.+.+++++ | -|.+-+|.|+.++=
T Consensus 16 ~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl----g--~D~~R~t~GARe~K 89 (382)
T COG1103 16 GFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL----G--MDEVRVTAGAREAK 89 (382)
T ss_pred CccccChhhccCcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh----C--CceeeecccchhhH
Confidence 45554432222236788888888876653322221 1122445666677777 5 47789999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhc----c-CCCCeEEEEeCCCCC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLE----T-KPTPKLVSVVNPGNP 176 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~----~-~~~~~~v~l~~p~np 176 (400)
+.++.+++++||.|++...+|++.+-+++..|.++..+ |.... .+.+++|...+.+. + ...+.+.+++++...
T Consensus 90 favMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eV-p~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~ 168 (382)
T COG1103 90 FAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEV-PNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGE 168 (382)
T ss_pred HHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEec-CCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCC
Confidence 99999999999999999999999999999999999999 75432 36778877777665 2 234788999999888
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
.|.+.+ .++++++|++++++++...+|.- +..+......+.+++++|-+|+++ +.-++|.+..+ +++.+.
T Consensus 169 YGNl~D---akkva~ic~e~gvPlllN~AYt~---Grmpvs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~---eE~ae~ 238 (382)
T COG1103 169 YGNLAD---AKKVAKICREYGVPLLLNCAYTV---GRMPVSGKEIGADFIVGSGHKSMA-ASAPIGVLAMS---EEWAEI 238 (382)
T ss_pred cCCchh---hHHHHHHHHHcCCceEeecceee---ccccccccccCCCEEEecCccchh-ccCCeeEEeeh---hHHHHH
Confidence 999998 89999999999999999999984 344455556678899999999996 55579999999 677766
Q ss_pred HHHhhc-cC--------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--CCCceEEEee
Q 015768 257 LLKVQD-NI--------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG--GEGAIYLWAR 325 (400)
Q Consensus 257 l~~~~~-~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~ 325 (400)
+-+... .+ ..+.-......+.+.+-.-.+ ..++.+.-.+..+.+.+.|++++++...+ |...-.+.+.
T Consensus 239 V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~e-RVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fe 317 (382)
T COG1103 239 VLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVE-RVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFE 317 (382)
T ss_pred HHhhcccccccceeeeecccccCchHHHHHhcCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeec
Confidence 543321 00 111111111111111111001 12333444556778889999988755443 3223333334
Q ss_pred CCCCC-------CCHHHHHHHHHHhcCeE-EeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 326 LPEKH-------LDDFEVVRWLAHRHGVV-VIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 326 ~~~~~-------~~~~~~~~~l~~~~gi~-v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.|... ....=+++.| +++||. +.|| ...++.+|.-.++.|+++..++.+++.++++
T Consensus 318 tp~f~eIakk~~r~gyFlY~EL-K~RgI~GI~~G----~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 318 TPVFHEIAKKHKRKGYFLYEEL-KKRGIHGIQPG----QTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred CchHHHHHHhCcCCceeeHHHH-HhcCccccccC----ceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 33211 0111245555 577876 5554 3678999976689999999999999988764
No 335
>PRK04311 selenocysteine synthase; Provisional
Probab=99.85 E-value=3.1e-18 Score=162.41 Aligned_cols=319 Identities=18% Similarity=0.118 Sum_probs=202.2
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCC-cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEG-LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g-~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p 121 (400)
+.++++++++.+.+.......|....+ .....+.+.+.+++..|. ++.+++++++.|+..++.++ .+||+|+++..
T Consensus 97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga--e~a~vv~sgtaAl~l~l~~l-~~GdeVIvs~~ 173 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGA--EDALVVNNNAAAVLLALNAL-AAGKEVIVSRG 173 (464)
T ss_pred CCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHh-CCCCEEEEcch
Confidence 367999999999887643222221111 011123444444444464 46788888999999988665 68999999987
Q ss_pred Cccc------hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC--Cc--cCCCHHHHHHHHH
Q 015768 122 YYFN------SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP--SG--TYIPERLLKRISD 191 (400)
Q Consensus 122 ~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np--tG--~~~~~~~l~~i~~ 191 (400)
.|.. +.+.++..|++++++ +.+.. .+++++++.+++++ ++|++++++|+ +| ...| +++|++
T Consensus 174 e~~~~ggs~~i~~~~~~~G~~l~~v-~~~~~---t~~~dle~aI~~~T--klV~~vh~sN~~i~G~~~~~d---l~eI~~ 244 (464)
T PRK04311 174 ELVEIGGAFRIPDVMRQAGARLVEV-GTTNR---THLRDYEQAINENT--ALLLKVHTSNYRIEGFTKEVS---LAELAA 244 (464)
T ss_pred hhhhcCcchhhHHHHHHCCcEEEEE-CCCCC---CCHHHHHHhcCccC--eEEEEEcCCCccccccCCcCC---HHHHHH
Confidence 5542 234567889999988 55422 37899999998777 99999999998 34 5678 999999
Q ss_pred HHHHcCCEEEEcccccccc----cC--CCCc--cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 192 LCKAAGSWLVVDNTYEYFM----YD--GRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 192 l~~~~~~~li~D~a~~~~~----~~--~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
+|++||+++++|.+.+.+. ++ ..+. .....+.+++++|.+|++| |...|+++++ ++++++++...-.
T Consensus 245 lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~Lg--Gp~~G~i~g~---~~li~~l~~~~~~ 319 (464)
T PRK04311 245 LGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLG--GPQAGIIVGK---KELIARLKKHPLK 319 (464)
T ss_pred HHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCccccc--CCceEEEEEc---HHHHHHHhhchhH
Confidence 9999999999999654331 11 1111 1123578899999999996 3358999988 7888777642221
Q ss_pred CCcCccHHHHHHHHHHhc----CCc--------HHHHHHHHHHHHHHHHHHHHhccCCC----CcccCC----------C
Q 015768 264 IPICASIISQHLALYSLQ----TGP--------EWVTERVKDLVRNREIIREALSPLGE----GAVKGG----------E 317 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~----~~~--------~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~----------~ 317 (400)
...........++..+|. ... .-+....+++.++++.+.+.|+.+.. ..+... .
T Consensus 320 r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~ 399 (464)
T PRK04311 320 RALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPV 399 (464)
T ss_pred HHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcC
Confidence 222223333333333333 111 11223346777788888888877531 122211 1
Q ss_pred C-ceEEEeeCCCCCCCHHHHHHHHHHhcC--eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 318 G-AIYLWARLPEKHLDDFEVVRWLAHRHG--VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 318 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~g--i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
. -.-+.+.+.....+..++..+|. +.. |..+. ..+.+.+.+.+..++|++..+++|++++.
T Consensus 400 ~~~~~~~v~~~~~~~~~~~l~~~lr-~~~~~i~~r~-----~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 400 DRLPSAAVTLTPKDRSLEALAARLR-LLPPPVIGRI-----EDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHh-cCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 0 01222333322346778887764 543 44432 57888999888888999999999888753
No 336
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.84 E-value=4e-18 Score=156.77 Aligned_cols=347 Identities=14% Similarity=0.105 Sum_probs=221.0
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a~ 102 (400)
.+|+.++|-.+|. +..+ -++++.+++.+.+.+-..... ....... ..++++.|.+... -+-++|+|++|+++|+
T Consensus 41 ~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~-~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAv 118 (449)
T COG0161 41 IDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMF-GGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAV 118 (449)
T ss_pred CCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhh-cccCCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHH
Confidence 3456666665554 3333 579999999999886331111 1111222 4566666665544 2358999999999999
Q ss_pred HHHHHHhc-------CCC-CEEEEeCCCccchhH-HHHhcC-------------cEEEEeccCCC-------CCCC----
Q 015768 103 VNIVLTLC-------DAG-DSVVMFAPYYFNSYM-SFQMTG-------------VTHILVGPCSS-------KTLH---- 149 (400)
Q Consensus 103 ~~~~~~l~-------~~g-d~vlv~~p~~~~~~~-~~~~~g-------------~~~~~~~~~~~-------~~~~---- 149 (400)
+.+++... +|. .+++.-..+|++-.- .+...| ..+..+ |... ..+.
T Consensus 119 EtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~-~~P~~y~~~~~~~~~~~~~ 197 (449)
T COG0161 119 ETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHL-PAPYAYRRGFFGEGDEEFA 197 (449)
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceec-CCCcccccCCCCCChHHHH
Confidence 99999864 233 348888888876442 221111 111222 2211 0111
Q ss_pred CCHHHHHHhhcc-C-CCCeEEEEeCCCCC-Ccc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768 150 PDADWLEKTLET-K-PTPKLVSVVNPGNP-SGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 150 ~~~e~l~~~l~~-~-~~~~~v~l~~p~np-tG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
-.++.|++++.. . .++.+++++....- +|+ ++|+..++++.++|++||+++|.||+-.+|...|..+.....+...
T Consensus 198 ~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~P 277 (449)
T COG0161 198 EAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVP 277 (449)
T ss_pred HHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCC
Confidence 235677777763 2 23677777654444 776 4677789999999999999999999999888777655444333333
Q ss_pred EEeccccccCCCcceeEEEEccCCcHHHHHHHHH-----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 226 NLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
.+-+++|.++.+=+++|.++.. .++.+.+.. +.+..+|+.++++..++.+.|+..++ +...++.++...+
T Consensus 278 Di~~~aKGLT~GY~Pl~a~l~~---~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~--e~l~~~~~~~~~~ 352 (449)
T COG0161 278 DILCLAKGLTGGYLPLSAVLTS---DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEE--EDLLERVAEIGAY 352 (449)
T ss_pred CeeeecccccccchhhHhHhhh---HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHH
Confidence 3446689986333678888877 577776654 34567889999999999998885221 2333444444555
Q ss_pred HHHHhcc----CCCCcccCCCCceEEEeeCCCCCCC--------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768 301 IREALSP----LGEGAVKGGEGAIYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 367 (400)
Q Consensus 301 l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~ 367 (400)
+.+.|++ .+.+--++.. |++..+.+.....+ ...+.... .++|++++|. .+.+=+++.. .
T Consensus 353 l~~~L~~~l~~~p~VgdVR~~-Gli~~iElv~d~~t~~~f~~~~~~~~~~~~-~e~Gl~iRp~-----g~~i~~~PPlii 425 (449)
T COG0161 353 LQAGLQAALADHPLVGDVRGL-GLIGAIELVADKATKTPFEARVGARVRAAA-LERGLLIRPL-----GDVIYLMPPLII 425 (449)
T ss_pred HHHHHHHhcccCCcEEEeecc-ceEEEEEEecccccccchhhhHHHHHHHHH-HHCCeEEeec-----CCEEEEcCCccC
Confidence 5555554 3333333343 66666665433211 33455544 4899999995 4577778777 8
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015768 368 VEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~~~ 388 (400)
|+++++++++++.+++++...
T Consensus 426 t~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 426 TREEIDELVDALREALDETLA 446 (449)
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998654
No 337
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.84 E-value=8.5e-18 Score=161.75 Aligned_cols=312 Identities=10% Similarity=0.067 Sum_probs=206.7
Q ss_pred HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-------------CCcEEEeCChHHHHHHHHHHhcC-------
Q 015768 52 VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-------------KSSVMVTAGANQAFVNIVLTLCD------- 111 (400)
Q Consensus 52 ~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-------------~~~i~~~~g~t~a~~~~~~~l~~------- 111 (400)
+...+.++ ...+..++...++++.+.+|+.+..+-. ...-++|+|+|+|+..++.+..+
T Consensus 110 l~~~lN~n-~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~ 188 (522)
T TIGR03799 110 LMVALNQN-LVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG 188 (522)
T ss_pred HHHHhcCC-cceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence 44444333 4556567778899999999998886421 12358899999999988877532
Q ss_pred -------------------CCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhc----cCCCC
Q 015768 112 -------------------AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (400)
Q Consensus 112 -------------------~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~ 165 (400)
++..|+++.-+|+++..+++.+|. +++.+ |.++++ .+|+++|++.++ .++
T Consensus 189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~v-p~d~~g-~~d~~~L~~~i~~~~~~g~-- 264 (522)
T TIGR03799 189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAI-KTDANN-RIDVDALRDKCAELAEQNI-- 264 (522)
T ss_pred cccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEE-EeCCCC-cCCHHHHHHHHHHHHHCCC--
Confidence 134689999999999999999898 78888 888765 789999999886 333
Q ss_pred eEEEEe--CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cccC-CCcEEEEeccccccCCCcce
Q 015768 166 KLVSVV--NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVE-GDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 166 ~~v~l~--~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~-~~~~i~~~s~sK~~g~~g~~ 240 (400)
+.+.++ ..++.+|.+.| +.+|+++|+++|+|+++|.+|+....-...+ .... ...+.++.|.||+++ ....
T Consensus 265 ~~~~vvataGtt~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~-~P~g 340 (522)
T TIGR03799 265 KPLAIVGVAGTTETGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLY-VPMG 340 (522)
T ss_pred CcEEEEEEecCcCCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCC-cCcc
Confidence 444444 55779999999 9999999999999999999998554321111 0111 245788889999885 5577
Q ss_pred eEEEEccCCcHHHHHHHHHhhc-------------cCCcCcc--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 241 VGYIAYPSEVEGFATQLLKVQD-------------NIPICAS--IISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~-------------~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
+|.++.++ +...+.+..... ....+-+ .+..+++...+ +.+.++++.++..++++++.+.|
T Consensus 341 ~G~llvr~--~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~l--G~~G~~~ii~~~~~la~~l~~~L 416 (522)
T TIGR03799 341 AGMVLFKD--PALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHII--GRKGYELLIDQSIEKAKYFADLI 416 (522)
T ss_pred cEEEEEeC--HHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 89998876 455444433100 0111112 22334444444 34567899999999999999999
Q ss_pred ccCCCCcccCCCCceEEEeeCC-CCCC--------------C--H----HHHHHHHHHhcCeE-EeCC----CccCC--C
Q 015768 306 SPLGEGAVKGGEGAIYLWARLP-EKHL--------------D--D----FEVVRWLAHRHGVV-VIPG----GACGC--R 357 (400)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------~--~----~~~~~~l~~~~gi~-v~~g----~~~~~--~ 357 (400)
++.+.++++.+.....+++++. .... . . ..+.+++. +.|.. +.+. ..+.+ .
T Consensus 417 ~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~-~~G~~~vs~t~l~~~~~~g~~~ 495 (522)
T TIGR03799 417 QQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQR-EAGKSFVSRTRLTPAQYDHQPT 495 (522)
T ss_pred hhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEecccccCCCCc
Confidence 9987777766544556666642 2110 0 1 23444443 45544 4322 11212 2
Q ss_pred CeEEEEecc--CCHHHHHHHHH
Q 015768 358 GHLRISFGG--LVEDDCKAAAD 377 (400)
Q Consensus 358 ~~iRi~~~~--~~~~~~~~~~~ 377 (400)
..+|+++.. ++.++++..++
T Consensus 496 ~~lR~~~~np~tt~~~i~~~l~ 517 (522)
T TIGR03799 496 VVFRVVLANPLTTHEILQDILD 517 (522)
T ss_pred EEEEEEecCCCCCHHHHHHHHH
Confidence 469999887 67777776554
No 338
>PRK06149 hypothetical protein; Provisional
Probab=99.84 E-value=5.3e-18 Score=175.86 Aligned_cols=342 Identities=14% Similarity=0.056 Sum_probs=219.1
Q ss_pred hcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
.+|+.++||..+...++ .+|++.+++.+.+.+..... .. ..+...++++.|.+...-..+.++|+++|++|++.+
T Consensus 582 ~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~---~~-~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~A 657 (972)
T PRK06149 582 MAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNS---RF-HYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLA 657 (972)
T ss_pred CCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccc---cc-cCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence 45788999988776665 79999999999887643221 11 223556667777655432346899999999999999
Q ss_pred HHHhc--CCCCEEEEeCCCccchhHHHHhc-Cc-------------EEEEeccCCC--CC-CC-CC-----HHHHHHhhc
Q 015768 106 VLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------THILVGPCSS--KT-LH-PD-----ADWLEKTLE 160 (400)
Q Consensus 106 ~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~--~~-~~-~~-----~e~l~~~l~ 160 (400)
++... .....|+....+|++........ +. .+..+ +... .+ +. .+ .+++++.++
T Consensus 658 lklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~l~ 736 (972)
T PRK06149 658 IRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPV-ESPNTYRGRFRGADSAADYVRDVVAQLE 736 (972)
T ss_pred HHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEe-CCCcccCCcCCCcccHHHHHHHHHHHHH
Confidence 99543 22367888888888755322110 10 01222 1111 00 11 11 234444332
Q ss_pred ----cCCCCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-CC--CcEEEEecccc
Q 015768 161 ----TKPTPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-EG--DHVVNLFSFSK 232 (400)
Q Consensus 161 ----~~~~~~~v~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~~--~~~i~~~s~sK 232 (400)
....+.+|+++..+...| ...+.++++++.++|++||+++|+||++.+|...|...... .. ..+++ +++|
T Consensus 737 ~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK 814 (972)
T PRK06149 737 ELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAK 814 (972)
T ss_pred HHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--Eecc
Confidence 223357777775554455 56788999999999999999999999997765444322111 11 22333 7789
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHh-hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----
Q 015768 233 AYGMMGWRVGYIAYPSEVEGFATQLLKV-QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP---- 307 (400)
Q Consensus 233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~---- 307 (400)
.+| .|..+|.++++ +++.+.+... ....+++.|+++..++.+.|+.-++ ++..++.++..++|++.|++
T Consensus 815 ~lg-~G~Pl~av~~~---~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~--e~l~~~~~~~G~~l~~~L~~l~~~ 888 (972)
T PRK06149 815 GMG-NGHPLGAVITR---REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE--EKLQENARRVGDHLKARLEALADR 888 (972)
T ss_pred ccc-CCeeeEEEEEc---HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 998 78999999999 7787776531 1224567899999999998875221 23445555555666666654
Q ss_pred CCCCcccCCCCceEEEeeCCCC-----C--CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 308 LGEGAVKGGEGAIYLWARLPEK-----H--LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
.+.+..+... |.++-+.+... . .....+...++ ++||++.+... ..+.+||.+.. +++++++.++++|
T Consensus 889 ~~~i~~vrG~-Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~-~~Gvl~~~~g~--~~~vl~~~Ppl~it~~~id~~~~~l 964 (972)
T PRK06149 889 HPLIGAVHGM-GLYLGVELVRDRQTLEPATEETAAICDRLL-ELGVIMQPTGD--HLNILKIKPPLCLDRESADFFVDML 964 (972)
T ss_pred CCCeEEEeec-ceEEEEEEecCcccCCCChHHHHHHHHHHH-hCCeEEeecCC--CCCEEEEECCCcCCHHHHHHHHHHH
Confidence 3433334444 56665655211 0 01345666665 78999987421 24789999875 7999999999999
Q ss_pred HHHHHH
Q 015768 380 RRGLEE 385 (400)
Q Consensus 380 ~~~l~~ 385 (400)
.+++.+
T Consensus 965 ~~~l~~ 970 (972)
T PRK06149 965 DRVLTE 970 (972)
T ss_pred HHHHHh
Confidence 999975
No 339
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.83 E-value=3.9e-18 Score=162.26 Aligned_cols=338 Identities=14% Similarity=0.128 Sum_probs=200.6
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHH--HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAM--EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQA 101 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~--~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a 101 (400)
+|+.++||..+. ..++ .+|+++ +++.+.+.+.................++++.+.+..+. ..+.++++++|++|
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA 115 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA 115 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence 688999998775 4444 688998 88888877532111111111223334445445444221 24789999999999
Q ss_pred HHHHHHHhcC--------C------CCEEEEeCCCccchhHHHH-hcCcE---EEEe---------cc-----CCCCCCC
Q 015768 102 FVNIVLTLCD--------A------GDSVVMFAPYYFNSYMSFQ-MTGVT---HILV---------GP-----CSSKTLH 149 (400)
Q Consensus 102 ~~~~~~~l~~--------~------gd~vlv~~p~~~~~~~~~~-~~g~~---~~~~---------~~-----~~~~~~~ 149 (400)
++.+++.... . +.+|+....+|++...... ..|.. -... .| .+.....
T Consensus 116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 195 (431)
T TIGR03251 116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD 195 (431)
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence 9999997731 1 3689999999988764432 22211 0001 01 0000000
Q ss_pred -------CCHHHHHHhhc-cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--
Q 015768 150 -------PDADWLEKTLE-TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-- 218 (400)
Q Consensus 150 -------~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-- 218 (400)
-+++.+++.+. ....+.+++++..+...|.+ .+.+++++|.++|++||+++|+||++.++...|..+..
T Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~ 275 (431)
T TIGR03251 196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ 275 (431)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence 12344555554 22346888888777777765 68889999999999999999999999977655432111
Q ss_pred cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH-H-HhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 015768 219 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL-L-KVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVR 296 (400)
Q Consensus 219 ~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l-~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 296 (400)
..-..+++ +++|.+. . .|++.... ..++.... . ......+++.+++...++.+.|+...+ ....++.++
T Consensus 276 ~gv~PDi~--~~gK~~~-~---~g~~~~~~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~ 346 (431)
T TIGR03251 276 LGVQPDIV--AFGKKTQ-V---CGIMAGRR-VDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEE--ERLVDNARV 346 (431)
T ss_pred cCCCCCEE--EecccCc-c---ceEEecch-HHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHH
Confidence 11123344 4678762 2 25665441 01222211 1 112345677888898888888875211 122333444
Q ss_pred HHHHHHHHhc----cCC-CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768 297 NREIIREALS----PLG-EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED 370 (400)
Q Consensus 297 ~~~~l~~~L~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~ 370 (400)
+.+++.+.|+ +.+ .+...... |.++.+.++... ....+...++ ++||++.+.. .+.+||+++. ++++
T Consensus 347 ~g~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~-~~Gvl~~~~g----~~~lr~~P~l~~t~~ 419 (431)
T TIGR03251 347 QGAHLLARLHELAAEFPHLVSNPRGR-GLMCAFDLPSTA-DRDEVIRQLY-REGVLLLGCG----ERSIRFRPPLTVTRE 419 (431)
T ss_pred HHHHHHHHHHHHHHhCccceeccccc-ceeEEEEeCCHH-HHHHHHHHHH-hCCeEEecCC----CCeEEEECCccCCHH
Confidence 4444444443 344 32223344 666667775321 2346777776 8999997742 3679999887 8999
Q ss_pred HHHHHHHHHHH
Q 015768 371 DCKAAADRLRR 381 (400)
Q Consensus 371 ~~~~~~~~l~~ 381 (400)
|+++++++|.+
T Consensus 420 eid~~l~~l~~ 430 (431)
T TIGR03251 420 EIDAAIDAIRR 430 (431)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 340
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=4.3e-18 Score=151.04 Aligned_cols=338 Identities=15% Similarity=0.111 Sum_probs=217.3
Q ss_pred hcCCCeEEcCCCC--CCC-CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHH
Q 015768 27 RGAKNAVSLAQGV--VYW-QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~-~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~ 100 (400)
-+++++|||.++. ... ...|++.+++.+.+.+-. .+.|.. . + .-.+++.+.+..+- ..+.|+|++++|+
T Consensus 53 ~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t---~-e-av~l~~~l~~~~~~~~~~rvff~nsGTe 127 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFT---L-E-AVELEEVLSAVLGKGSAERVFFCNSGTE 127 (433)
T ss_pred CCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCcccc---H-H-HHHHHHHHHhcccCCCccEEEEecCCcH
Confidence 3568899998876 223 368999999998887632 222311 1 1 22333334333321 4789999999999
Q ss_pred HHHHHHHHhcC------CC--CEEEEeCCCccchh-HHHHhcCcEEEEeccCC---CC---CCCCCHHHHHHhhccCC-C
Q 015768 101 AFVNIVLTLCD------AG--DSVVMFAPYYFNSY-MSFQMTGVTHILVGPCS---SK---TLHPDADWLEKTLETKP-T 164 (400)
Q Consensus 101 a~~~~~~~l~~------~g--d~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~~---~~---~~~~~~e~l~~~l~~~~-~ 164 (400)
|++.++....+ +- ..++....+|++-. .++...+...... |.+ ++ .---|...++++++.++ .
T Consensus 128 Ane~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~-~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~ 206 (433)
T KOG1401|consen 128 ANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGL-PFDPIAPDVVTAEYNDSTALEKLFESHKGE 206 (433)
T ss_pred HHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCC-CCCCCCCceeecccCCHHHHHHHHHhCCCc
Confidence 99999998752 11 24888888887744 4444333322222 222 11 11127889999998443 4
Q ss_pred CeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC----ccccCCCcEEEEeccccccCCCcc
Q 015768 165 PKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK----HCCVEGDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~~i~~~s~sK~~g~~g~ 239 (400)
+.+|+++..+-..|.+ .+++++..|.++|+++++++|.||++.+|...+.. +....+| +.++.|.++ .|+
T Consensus 207 IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD----I~t~aK~L~-gGl 281 (433)
T KOG1401|consen 207 IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD----ITTVAKPLG-GGL 281 (433)
T ss_pred eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc----ceeehhhcc-CCc
Confidence 7888888778778875 58889999999999999999999999987654432 1122233 456789997 889
Q ss_pred eeEEEEccCCcHHHHHHHHHhhc---cCCcCccHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQD---NIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
++|..+++ .++.+.+..... ..+++.|++...++...++. ..++.+++.+.-...++.+.+.+.+.+.....
T Consensus 282 PigA~~v~---~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g 358 (433)
T KOG1401|consen 282 PIGATGVR---DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICG 358 (433)
T ss_pred eeEEEeeh---HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceee
Confidence 99999999 677787765444 78899999999999999985 23667777777778888888888876552111
Q ss_pred CCCCceEEEeeCCCC---CCCHHHHHHHHH-------HhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEK---HLDDFEVVRWLA-------HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~---~~~~~~~~~~l~-------~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
....+++.-+.+... ..+.......++ .+.|+++.|-. -++.. .++|.++.+++.+.+.+.
T Consensus 359 ~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~--------~l~~~-~~~E~i~~~l~i~~~~l~ 429 (433)
T KOG1401|consen 359 GVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIY--------LLTVE-HTPEVIQRLLTILEKVLS 429 (433)
T ss_pred eeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEeccc--------ccccc-CcHHHHHHHHHHHHHHHH
Confidence 122244443332211 112111111111 12345554411 11222 368999999999999888
Q ss_pred HHh
Q 015768 385 ELV 387 (400)
Q Consensus 385 ~~~ 387 (400)
++.
T Consensus 430 ~~~ 432 (433)
T KOG1401|consen 430 ALN 432 (433)
T ss_pred Hhc
Confidence 764
No 341
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.82 E-value=3.8e-17 Score=166.51 Aligned_cols=343 Identities=15% Similarity=0.092 Sum_probs=222.4
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcEEEeC-ChHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTA-GANQAFVNI 105 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~-g~t~a~~~~ 105 (400)
+.+|.+++..+-+ ++.+...+...-.-....+|.+ .+|..++..++.+++.+..|.+ ++.+.+ +++++....
T Consensus 499 ~~~i~lGsct~~~--~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~d--~~sl~~~~ga~ge~ag 574 (954)
T PRK05367 499 RSMIPLGSCTMKL--NAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGYD--AVSLQPNAGAQGEYAG 574 (954)
T ss_pred cceeeCCcCCCcC--CHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCCC--CEEECccHHHHHHHHH
Confidence 3456666633333 3444443333221122455554 2566788888889999998975 466655 455555444
Q ss_pred HHHhc----CCCC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCC
Q 015768 106 VLTLC----DAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNP 176 (400)
Q Consensus 106 ~~~l~----~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~np 176 (400)
+.++. ++|+ +|+++...|.+....++..|++++.+ +.+.+| .+|+++|++.++++ +.+.+|++++|++-
T Consensus 575 L~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v-~~d~~G-~iD~~~L~~~i~~~~~~la~V~it~pst~ 652 (954)
T PRK05367 575 LLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVV-ACDENG-NIDLDDLRAKAEEHADNLAAIMITYPSTH 652 (954)
T ss_pred HHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEE-CCCCCC-CcCHHHHHHHHhccCCCeEEEEEEcCCCC
Confidence 43333 4565 59999999988888899999999999 887665 78999999999753 44688888888876
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHH
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEG 252 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~ 252 (400)
++...| +++|+++|+++|+++++|.++......-. .....+.+++.+|++|+|+. +|..+|.+..+ +.
T Consensus 653 G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~l~--~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr---~~ 724 (954)
T PRK05367 653 GVFEET---IREICEIVHEHGGQVYLDGANMNAQVGLA--RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVK---AH 724 (954)
T ss_pred eeecCC---HHHHHHHHHHcCCEEEEECcChhhccCCC--ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeec---cc
Confidence 444578 99999999999999999999964322211 12234678999999999852 34557888877 33
Q ss_pred HHHHHHHhh-----c---cCCcCccHH----HHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC-
Q 015768 253 FATQLLKVQ-----D---NIPICASII----SQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG- 318 (400)
Q Consensus 253 ~~~~l~~~~-----~---~~~~~~~~~----~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~- 318 (400)
+...+.... . ......+.. ....+..++. .|.+.+++..+....+++++.+.|++.-.+.+..+.+
T Consensus 725 l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~ 804 (954)
T PRK05367 725 LAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGR 804 (954)
T ss_pred ccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCC
Confidence 333332211 0 001111111 2222222333 2556777888888889999999997743323333211
Q ss_pred -ceEEEeeC---CCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 319 -AIYLWARL---PEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 319 -~~~~~~~~---~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
..=+++++ +.. ..+.+++.++|. ++|+....- .|-.++.+||+++- .+.+|++++++.+++...+..+
T Consensus 805 ~~~e~i~~~~~~~~~~g~~~~di~krL~-d~G~~~~t~-~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 805 VAHECILDLRPLKESTGITVDDIAKRLI-DYGFHAPTM-SFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred cccceEEEeecccccCCCCHHHHHHHHH-HCCCeEeec-CCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 11122333 321 235688999885 899987542 23347889999887 8999999999999988887764
No 342
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.82 E-value=1.3e-18 Score=144.94 Aligned_cols=166 Identities=23% Similarity=0.265 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh-HHHHhcCcEEEEeccCCCCCC-
Q 015768 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPCSSKTL- 148 (400)
Q Consensus 71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~~- 148 (400)
.++++.+++++ +.+.+++++++|+|+|+..++.++.+++++|+++.++|++.. ..++..|++++.+ +.++++.
T Consensus 3 ~~~~~~l~~~~----~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~ 77 (170)
T cd01494 3 EELEEKLARLL----QPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPV-PVDDAGYG 77 (170)
T ss_pred HHHHHHHHHHc----CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEe-ccCCCCcc
Confidence 45566666665 456789999999999999999999988999999999999998 8888999999988 7765542
Q ss_pred CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
..+.+.+++... ..+++++++++++|++|...+ +++|.++|+++|+++|+|++|..+............+.++++.
T Consensus 78 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~ 153 (170)
T cd01494 78 GLDVAILEELKA-KPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTF 153 (170)
T ss_pred chhhhhhhhccc-cCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEE
Confidence 222224444332 234699999999999999999 6888999999999999999999877654222233456789999
Q ss_pred ccccccCCCcceeEEEEcc
Q 015768 229 SFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i~~~ 247 (400)
|++|++|. .++|+++.+
T Consensus 154 s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 154 SLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred EcccccCC--CceEEEEeC
Confidence 99999973 678998753
No 343
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.81 E-value=1.7e-17 Score=153.23 Aligned_cols=293 Identities=14% Similarity=0.058 Sum_probs=206.3
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCCC--cEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccc--hh-HHHHhcCc-EEE
Q 015768 66 ADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFN--SY-MSFQMTGV-THI 138 (400)
Q Consensus 66 ~~~g~~~~~~~~a~~l~~~~~~~~~--~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~--~~-~~~~~~g~-~~~ 138 (400)
.++...++.+++.+.|.+.++.+.+ -+++++|+|.+++.++..+. ++|++|++.. +++ +. ++++..|+ ++.
T Consensus 33 Rs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g--~FG~r~~~eia~~~g~~~v~ 110 (374)
T TIGR01365 33 RSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE--SFGKGWVTDVTKQLKLPDVR 110 (374)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC--HHHHHHHHHHHHhcCCCCcE
Confidence 4555677778888888888887533 35668999999999999998 5889998864 444 34 77888998 466
Q ss_pred EeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc
Q 015768 139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC 218 (400)
Q Consensus 139 ~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~ 218 (400)
.+ . .+.|..++++.++. . +.|++++....||+..| +.++...+ ++.++|+|.+.+. ++.+...
T Consensus 111 ~l-~-~~~g~~~~~~~ve~----~---~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVDavSs~---g~~~l~~ 173 (374)
T TIGR01365 111 VL-E-AEYGKLPDLKKVDF----K---NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICDATSAA---FAQDLDY 173 (374)
T ss_pred EE-c-CCCCCCCCHHHcCC----C---CCEEEecCCCchheecc---cccccccc--CCCcEEEEccchh---cCCCCCh
Confidence 66 4 34666778888872 1 33668888889999999 55544322 5899999999883 3444433
Q ss_pred cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh-----------------------hccCCcCccHHHHHH
Q 015768 219 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-----------------------QDNIPICASIISQHL 275 (400)
Q Consensus 219 ~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~~~ 275 (400)
. ..++++.|..|++++|+ .+++++.+ ++..++.+.. ...+.++++....++
T Consensus 174 d--~iDv~~tgsQK~L~~pp-Gls~v~vs---~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a 247 (374)
T TIGR01365 174 H--KLDVVTFSWQKVLGGEG-AHGMLILS---PRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVED 247 (374)
T ss_pred h--HCcEEEEechhccCCCC-ceEEEEEC---HHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHH
Confidence 3 37899999999997543 46777777 4554443310 123456677777777
Q ss_pred HHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCceEEEeeCCCCCC-----C-----HHHHHHH
Q 015768 276 ALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWARLPEKHL-----D-----DFEVVRW 339 (400)
Q Consensus 276 ~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~~~~~-----~-----~~~~~~~ 339 (400)
+..+++.. +..++.+.++++++++.+++.++++++...... .+.....+.++.... + ..++...
T Consensus 248 ~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (374)
T TIGR01365 248 WLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELIST 327 (374)
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHH
Confidence 77777521 124789999999999999999999984344431 233445566644321 2 4677776
Q ss_pred HHHhcCeEEeCCCccCCCCeEEEE-eccCCHHHHHHHHHHHHHHHH
Q 015768 340 LAHRHGVVVIPGGACGCRGHLRIS-FGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 340 l~~~~gi~v~~g~~~~~~~~iRi~-~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+. ++||.+.+|.....+..+||+ ++..+.+|++.+++.|.=+.+
T Consensus 328 l~-~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 328 LE-KEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred HH-HCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 64 789999988766556899998 554899999999998876554
No 344
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.81 E-value=7.3e-17 Score=152.66 Aligned_cols=316 Identities=15% Similarity=0.097 Sum_probs=191.8
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCC-cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEG-LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g-~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p 121 (400)
+.|+++++++.+.+.......|....+ .....+.+.+.+++..|.+ ..+++++++.|+..++.+ ..+||+|+++..
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae--~alvv~sg~aAi~l~l~~-l~~GdeVIvs~~ 168 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAE--DALVVNNNAAAVLLALNT-LAKGKEVIVSRG 168 (454)
T ss_pred CCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHH-hCCcCEEEECCC
Confidence 458999999999887643222321101 1112234444444444653 456778888999988855 578999999987
Q ss_pred Ccc---c---hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC--c--cCCCHHHHHHHHH
Q 015768 122 YYF---N---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS--G--TYIPERLLKRISD 191 (400)
Q Consensus 122 ~~~---~---~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt--G--~~~~~~~l~~i~~ 191 (400)
.|. + ..+.++..|++++++ +.+.. .+++++++++++++ ++|++++++|++ | ...| +++|++
T Consensus 169 e~v~~ggs~~i~~~~~~~G~~~~~v-~~~~~---~~l~dle~aI~~~T--~lv~~~h~sN~~~~G~~~~~d---l~~I~~ 239 (454)
T TIGR00474 169 ELVEIGGSFRIPDVMEQSGAKLVEV-GTTNR---THLKDYEDAITENT--ALLLKVHTSNYRIVGFTEEVS---IAELVA 239 (454)
T ss_pred hhhhhcchhhHHHHHHHcCCEEEEe-CCCCC---CCHHHHHHhcCcCC--EEEEEEccCcccccCCCCCCC---HHHHHH
Confidence 752 2 234567789999988 55322 37899999998877 999999999985 6 4778 999999
Q ss_pred HHHHcCCEEEEccccccccc------CCCCc--cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 192 LCKAAGSWLVVDNTYEYFMY------DGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 192 l~~~~~~~li~D~a~~~~~~------~~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
+|++||+++++|.+.+.+.. ...+. .....+.+++++|.+|++| |...|+++++ ++++++++...-.
T Consensus 240 la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~Lg--Gp~~G~i~g~---~~~i~~l~~~~l~ 314 (454)
T TIGR00474 240 LGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLG--GPQAGIIVGK---KELIERLKKNPLT 314 (454)
T ss_pred HHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccC--CCeEEEEEEC---HHHHHhhhhchhH
Confidence 99999999999986543311 11111 2234567899999999996 3358999988 6777665432211
Q ss_pred CCcCccHHHHHHHHHHh----cCCc--------HHHHHHHHHHHHHHHHHHHHhccC--CCC--cccCCC----Cc----
Q 015768 264 IPICASIISQHLALYSL----QTGP--------EWVTERVKDLVRNREIIREALSPL--GEG--AVKGGE----GA---- 319 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l----~~~~--------~~~~~~~~~~~~~~~~l~~~L~~~--~~~--~~~~~~----~~---- 319 (400)
...........++...+ .... +-+....+++++++..+.+.|++. +.. .+.... +|
T Consensus 315 r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~ 394 (454)
T TIGR00474 315 RALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPD 394 (454)
T ss_pred HHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcC
Confidence 11122222222222222 2111 112233456677778888878763 221 111110 01
Q ss_pred ---eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768 320 ---IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 320 ---~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
.-..+.+.....+..++..+|. +....|..- -..+.+.+.+.+..++|++..+++|
T Consensus 395 ~~l~~~~v~~~~~~~~~~~l~~~lr-~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 395 ERLPSYAVTLTPDGLSAEKLEARLR-ELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred CCCCeEEEEEecCCCCHHHHHHHHh-cCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 1122233222346778887664 555333221 2478888888887788888777765
No 345
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.81 E-value=6.1e-18 Score=146.31 Aligned_cols=351 Identities=17% Similarity=0.188 Sum_probs=243.8
Q ss_pred chHHHHHHHHHhcC--CCeEEcCCCC--CCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc--C
Q 015768 16 MPIMVQIQELVRGA--KNAVSLAQGV--VYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN--K 86 (400)
Q Consensus 16 ~~~~~~~~~~~~~~--~~~i~~~~~~--~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~--~ 86 (400)
....--...+|..+ +..++++.|. -+.+ .-+.|.+|-.+.........|-+..|.+++.+..++...... -
T Consensus 36 pDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ 115 (427)
T KOG1411|consen 36 PDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPV 115 (427)
T ss_pred CCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchh
Confidence 33344455566555 4477887764 2222 235666666655554445578899999999999999864221 1
Q ss_pred CCCCcEEEe--CChHHHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 87 LYKSSVMVT--AGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 87 ~~~~~i~~~--~g~t~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
++.++++.+ -++|.|+.....-+. -++..|.++.|+|.++..+++..|+.+..++.-++....+|.+-+.+.+...
T Consensus 116 ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~ 195 (427)
T KOG1411|consen 116 IKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEA 195 (427)
T ss_pred hhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcC
Confidence 234566554 456777777666654 4688999999999999999999999887774455555566777766666644
Q ss_pred CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-------ccCCCcEEEEecccccc
Q 015768 163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-------CVEGDHVVNLFSFSKAY 234 (400)
Q Consensus 163 ~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-------~~~~~~~i~~~s~sK~~ 234 (400)
+.-..|++- ..|||||+-...|.+++|.++.++.+.+-+.|.+|.+|..+..... ...+...++.-|++|.+
T Consensus 196 p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNM 275 (427)
T KOG1411|consen 196 PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNM 275 (427)
T ss_pred CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhc
Confidence 423444444 3599999999999999999999999999999999998887643221 12356678899999999
Q ss_pred CCCcceeEEE--EccCCcHHHHHHHH----HhhccCCcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHHHHHHHH
Q 015768 235 GMMGWRVGYI--AYPSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTGP---EW---VTERVKDLVRNREIIR 302 (400)
Q Consensus 235 g~~g~~~G~i--~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~l~ 302 (400)
|+-|-|+|.+ ++.+ .+...+++ ...+.-..+++......+...|.+.. +| .+-+..++...+..|.
T Consensus 276 GLYgERvGa~svvc~~--ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~ 353 (427)
T KOG1411|consen 276 GLYGERVGALSVVCKD--ADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLF 353 (427)
T ss_pred chhhhccceeEEEecC--HHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHh
Confidence 9999999984 4554 45444443 34444455667777777777777522 34 4556788888899999
Q ss_pred HHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768 303 EALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 303 ~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
+.|+..+. ...+..+.|+|.+-.+. .+.+++|.+++.|+...-. |||++..+...+..+.+++
T Consensus 354 d~L~~~gs~~~W~hI~~QIGMF~fTgl~------peQv~~l~ke~~iYmT~dG--------RiS~aG~ss~nV~yLa~ai 419 (427)
T KOG1411|consen 354 DALEKEGSPGNWSHITKQIGMFCFTGLN------PEQVDWLTKEYHIYLTKDG--------RISMAGLSSSNVPYLADAI 419 (427)
T ss_pred HHhhcCCCCccHHHHHHhhheeeecCCC------HHHHHHHHhhheeeeccCc--------eEeeccccccCCcccchhh
Confidence 99998654 22344556899987775 3567788889999987433 8998886666555555555
Q ss_pred HHH
Q 015768 380 RRG 382 (400)
Q Consensus 380 ~~~ 382 (400)
.++
T Consensus 420 h~v 422 (427)
T KOG1411|consen 420 HAV 422 (427)
T ss_pred HhH
Confidence 443
No 346
>PRK15029 arginine decarboxylase; Provisional
Probab=99.81 E-value=2.8e-16 Score=155.28 Aligned_cols=230 Identities=13% Similarity=0.064 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCC--C
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--L 148 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~ 148 (400)
....+..+..++.+|.+ ...++++|+|.++..++.+++++||+|++...||-++..++...|+.++++.|.. +.| .
T Consensus 205 G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~ 283 (755)
T PRK15029 205 GAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIG 283 (755)
T ss_pred cHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 34445555555556753 5678899999999999999999999999999999999999999999999984443 222 1
Q ss_pred CCC-----HHHHHHhhccCCCCe--------EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCC-
Q 015768 149 HPD-----ADWLEKTLETKPTPK--------LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDG- 213 (400)
Q Consensus 149 ~~~-----~e~l~~~l~~~~~~~--------~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~- 213 (400)
.++ .+.+++.++..+..+ ++++++|+. .|.+.+ +++|+++|+++++++++||||+... +..
T Consensus 284 ~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~~ 359 (755)
T PRK15029 284 PIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPI 359 (755)
T ss_pred CCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECccccccccCcc
Confidence 234 889999987443334 899998865 799999 9999999999999999999997433 322
Q ss_pred CC-cccc-----C-CCcE-EEEeccccccCCCcceeE-EEEccCCcHHH-HHHHHHhhc-cCCcCccHHHHHHHHHHhcC
Q 015768 214 RK-HCCV-----E-GDHV-VNLFSFSKAYGMMGWRVG-YIAYPSEVEGF-ATQLLKVQD-NIPICASIISQHLALYSLQT 282 (400)
Q Consensus 214 ~~-~~~~-----~-~~~~-i~~~s~sK~~g~~g~~~G-~i~~~~~~~~~-~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~ 282 (400)
.+ .... . .+.+ +++-|.||.+ +++..| ++..+++...+ .++++.... ..+.+++.+....+..+-..
T Consensus 360 ~p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~ 437 (755)
T PRK15029 360 YADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSM 437 (755)
T ss_pred ccccccccccccccCCCceEEEEchhhcc--cchhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHH
Confidence 11 1222 1 3444 8899999998 455544 45443320001 234443332 23445555444433333322
Q ss_pred CcH-HHHHHHHHHHHHHHHHHHHhccC
Q 015768 283 GPE-WVTERVKDLVRNREIIREALSPL 308 (400)
Q Consensus 283 ~~~-~~~~~~~~~~~~~~~l~~~L~~~ 308 (400)
.+. ...+..++..+....+++.+.++
T Consensus 438 m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 438 MDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 111 23344455555555566555443
No 347
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.81 E-value=6.3e-18 Score=155.91 Aligned_cols=235 Identities=13% Similarity=0.150 Sum_probs=147.7
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-C--CC
Q 015768 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-T--LH 149 (400)
Q Consensus 73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~--~~ 149 (400)
...+..+..++.+|. .+..++++|+|.++.+++.++++|||+|+++..||-++..++...|+.++++.|.+.. | ..
T Consensus 67 ~I~eAe~~aA~~fGA-d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~ 145 (417)
T PF01276_consen 67 IIKEAEELAARAFGA-DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGG 145 (417)
T ss_dssp HHHHHHHHHHHHHTE-SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEE
T ss_pred HHHHHHHHHHHhcCC-CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccC
Confidence 334444445555574 3557778999999999999999999999999999999999999999999999555222 2 13
Q ss_pred CCH-----HHHHHhhccCCCCeE---EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCCCccccC
Q 015768 150 PDA-----DWLEKTLETKPTPKL---VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGRKHCCVE 220 (400)
Q Consensus 150 ~~~-----e~l~~~l~~~~~~~~---v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~ 220 (400)
++. +.+++.++..+..|+ ++|++|+. .|.+.+ +++|+++|++++++|++||||+... +...+.....
T Consensus 146 i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~ 221 (417)
T PF01276_consen 146 ISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA 221 (417)
T ss_dssp B-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred CChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence 455 899999985554455 99998865 799999 9999999999999999999997432 3321222222
Q ss_pred CC-------cEEEEeccccccCCCcce-eEEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCC-cHHHHHH
Q 015768 221 GD-------HVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTG-PEWVTER 290 (400)
Q Consensus 221 ~~-------~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~-~~~~~~~ 290 (400)
.+ .++++.|.||.++ ++. .+++..+++..--.++++.... ..+.+++.+....+..+.... ....++.
T Consensus 222 ~gad~~~~~~~~vvqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l 299 (417)
T PF01276_consen 222 LGADRPNDPGIIVVQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGREL 299 (417)
T ss_dssp TTSS-CTSBEEEEEEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHH
T ss_pred ccCccccccceeeeechhhccc--ccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHH
Confidence 23 3499999999984 544 4566555421012344443222 235566655555444443322 2334556
Q ss_pred HHHHHHHHHHHHHHh---ccCCCCccc
Q 015768 291 VKDLVRNREIIREAL---SPLGEGAVK 314 (400)
Q Consensus 291 ~~~~~~~~~~l~~~L---~~~~~~~~~ 314 (400)
.++..++...+++.+ +++.++++.
T Consensus 300 ~~~~i~~a~~~R~~i~~~~~~~~~~~~ 326 (417)
T PF01276_consen 300 LEEAIELAEEFRKKINRLNDIWGFKVL 326 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHCCT-SSEES
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEecC
Confidence 666666667777766 555444433
No 348
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.80 E-value=1.2e-16 Score=159.16 Aligned_cols=340 Identities=12% Similarity=0.089 Sum_probs=219.6
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcEEEeC-ChHHHHHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTA-GANQAFVNIV 106 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~-g~t~a~~~~~ 106 (400)
.++.+++..+-+++-...+.+-...+.. ..+|.+ .+|..++..++.+++.+..|.+. +-+.+ +++.+....+
T Consensus 501 ~~~~LGsCTmK~n~~~~~~p~s~~eF~t--~hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~--~Sl~p~sGA~gE~A~L 576 (954)
T PRK12566 501 SMIPLGSCTMKLNATSEMIPITWPEFAQ--LHPFAPREQAEGYRAMIDELEAWLCAITGFDA--ICMQPNSGAQGEYAGL 576 (954)
T ss_pred CcccCcccccCcCcHHhhhcccchhhhc--CCCCCchhhhcCHHHHHHHHHHHHHHHHCCCe--EeecCCchHHHHHHHH
Confidence 3466666444443333333222222222 466777 68888899999999998888653 34444 5666665666
Q ss_pred HHhcC-------C-CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCC
Q 015768 107 LTLCD-------A-GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPS 177 (400)
Q Consensus 107 ~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~npt 177 (400)
.++.. + .++|+++.-.|......+...|++++.+ |.+++| .+|+++|++.++ .++..++|.+++|++-+
T Consensus 577 mair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~V-p~D~~G-~iDle~L~a~I~~~~~~laaVmiT~Pnt~G 654 (954)
T PRK12566 577 LAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIV-ECDPDG-NVDLDDLKAKAAAAGDRLSCLMITYPSTHG 654 (954)
T ss_pred HHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEe-ccCCCC-CcCHHHHHHHhhccCCCEEEEEEEecCcCc
Confidence 66542 3 3678899988866666678889999999 888766 789999999997 33445788888888766
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGF 253 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~~ 253 (400)
+...+ +++|+++|+++|+++++|.++..... +. ......+.++++++++|+++. +|..+|.+..+ +.+
T Consensus 655 v~e~~---V~eI~~iah~~Galv~vDgA~~~a~~-~l-~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~---~~L 726 (954)
T PRK12566 655 VYEEG---IREICEVVHQHGGQVYMDGANLNAQV-GL-ARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVR---AHL 726 (954)
T ss_pred eecch---HHHHHHHHHHcCCEEEEEeeChhhcc-CC-CChhhcCCCEEEecCCcccCcCccCCCCccchhhhh---hhh
Confidence 55455 99999999999999999999863221 11 112345788999999999952 24445665555 333
Q ss_pred HHHHHHhh----------ccC---CcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768 254 ATQLLKVQ----------DNI---PICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319 (400)
Q Consensus 254 ~~~l~~~~----------~~~---~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 319 (400)
...+.... ... ....+.....++..++.. |.+ +.+.......+++++++.|.+...+.+.++.+.
T Consensus 727 ~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~ 805 (954)
T PRK12566 727 APFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNER 805 (954)
T ss_pred hhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCC
Confidence 33333221 000 111222223333444443 444 555555567788999999977433334322212
Q ss_pred --eEEEeeCC---C-CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 320 --IYLWARLP---E-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 320 --~~~~~~~~---~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.-+.+++. . ...+..++..+|+ ++||.... ..|-.++.+|++++- .+.+|+|++++.|++..++..
T Consensus 806 ~~hEfii~~~~l~~~~g~~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 806 VAHECILDLRPLKAQTGISEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred eeeEEEEEccccccccCCCHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 11223332 2 1246678999998 89998644 334357899999987 899999999999999988865
No 349
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.80 E-value=5e-17 Score=153.63 Aligned_cols=296 Identities=17% Similarity=0.163 Sum_probs=210.5
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcCC--------C
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDA--------G 113 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~~--------g 113 (400)
.+++.+.+.+...+.++ ....+..++...+.+.+..++++.++.+ .-.-.+|+|+|+++..++.+.... +
T Consensus 73 ~~~~~a~~~~~~~~~~n-l~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 73 RVPPVAAELLVSALNKN-LGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred CCHHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence 35677777788887775 3434345578899999999999999874 456799999999999888876311 1
Q ss_pred ------CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 114 ------DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 114 ------d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
.+|+++.-.|+++...++.+|+....+ |.++..+.+|++++++.+.+.+...+|+-+.++.++|.+-| ++
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v-~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i~ 227 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRV-PTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---IE 227 (460)
T ss_pred cccCCCCeEEecCcchhHHHHHHHHhCCCceeE-EeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---HH
Confidence 179999999999999999999988888 77765568999999999997763333666678999999999 99
Q ss_pred HHHHHHHHcCCEEEEcccccccccC--CCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcH-HHHHHHHHhhc
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYD--GRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-GFATQLLKVQD 262 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~--~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~-~~~~~l~~~~~ 262 (400)
+|.++|+++++|++||.|++++..- ..... ..-...+-+..++||+. .....+||++.++ + .+.+.+.....
T Consensus 228 ~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g-~aP~~~G~il~rd--~e~l~~~~~~~~~ 304 (460)
T COG0076 228 ELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYG-LAPIGCGVVLFRD--EEALRRILIFADY 304 (460)
T ss_pred HHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECccccc-CCCCCceEEEEEC--HHHhhhhhhcccc
Confidence 9999999999999999999977742 21122 11234556677999987 4778899999997 5 34444432111
Q ss_pred cCC--------c--Cc---cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768 263 NIP--------I--CA---SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 329 (400)
Q Consensus 263 ~~~--------~--~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 329 (400)
..+ . +- ..+.+++....+ +.+.+.++.++..++++++.+.|++.+.+.+..+...+.+.++.++.
T Consensus 305 yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l--G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~ 382 (460)
T COG0076 305 YLPGGGIPNFTILGSRPGRQALALYANLRRL--GREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDD 382 (460)
T ss_pred cCCCCCcCceeEeeccchHHHHHHHHHHHHh--CHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCc
Confidence 111 0 11 223333333333 45778899999999999999999999865666544588888888653
Q ss_pred CCCHHHHHHHHHHhcCeEEe
Q 015768 330 HLDDFEVVRWLAHRHGVVVI 349 (400)
Q Consensus 330 ~~~~~~~~~~l~~~~gi~v~ 349 (400)
.....+...++ ++.|..+.
T Consensus 383 ~~~~~~~~~~~-~~~gw~v~ 401 (460)
T COG0076 383 EDTLADLSERL-DRRGWQVP 401 (460)
T ss_pred ccchhchHHHH-HhcCceee
Confidence 21022333333 34565553
No 350
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.80 E-value=5.2e-17 Score=154.60 Aligned_cols=330 Identities=16% Similarity=0.131 Sum_probs=195.1
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.. .+.. ....+-++++.+.+... ..+.++|+++|++|++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~--~~~~---~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e 118 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC--NFTR---PSAIELDAAESFLELID-GADMVKFCKNGSDATS 118 (431)
T ss_pred CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc--CCCC---CCHHHHHHHHHHHHhCC-ccceEEEecCHHHHHH
Confidence 5678899998775 4444 78999999999998743 2321 12233345555554432 1368999999999999
Q ss_pred HHHHHhcC-CC-CEEEEe-CCCccchhHHHH-----hcCcE--E--EEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEE
Q 015768 104 NIVLTLCD-AG-DSVVMF-APYYFNSYMSFQ-----MTGVT--H--ILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSV 170 (400)
Q Consensus 104 ~~~~~l~~-~g-d~vlv~-~p~~~~~~~~~~-----~~g~~--~--~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l 170 (400)
.+++.... .| .+|+.. ..+|++...... ..|.. . ..+ ... .-|++++++.+... ..+++|++
T Consensus 119 ~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~-~~~----~~d~~~l~~~l~~~~~~~aavi~ 193 (431)
T PRK06209 119 AAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTV-TFR----YNDIASLEALFEDHPGRIACVIL 193 (431)
T ss_pred HHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccc-ccC----CCCHHHHHHHHHhCCCCEEEEEE
Confidence 99997642 23 456555 344433221110 00110 0 001 111 12788999888632 23566666
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250 (400)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~ 250 (400)
+.. .|...+.+.+++|.++|++||+++|+||++.++...+..... ..+...-+.+++|.+| .|+.+|+++++
T Consensus 194 Epv---~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~-~~gv~PDi~t~gK~lg-gG~p~~av~~~--- 265 (431)
T PRK06209 194 EPA---TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK-LYGIVPDLSCFGKALG-NGFAVSALAGK--- 265 (431)
T ss_pred ccc---cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH-HhCCCcceeeehhhhc-CCcccEEEEEH---
Confidence 533 344778999999999999999999999999766432111100 0111122457799998 67889999998
Q ss_pred HHHHHH--HHH------hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCcccCCCC
Q 015768 251 EGFATQ--LLK------VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGEGAVKGGEG 318 (400)
Q Consensus 251 ~~~~~~--l~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~~~~~~~ 318 (400)
+++.+. +.. +....+++++++...++.+.|+..++ ....++..++.+++++.|+ +++....+...+
T Consensus 266 ~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~--~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G 343 (431)
T PRK06209 266 REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD--EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSG 343 (431)
T ss_pred HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeec
Confidence 677665 211 11345677788888888888774221 1234444444455554444 344422122222
Q ss_pred ceEEEeeC--CCCCCC----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 319 AIYLWARL--PEKHLD----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 319 ~~~~~~~~--~~~~~~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+..+.-+ ...... ...+...++ ++||.+.| ++++.. +|++++++++++|.+++.++.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~~p~---------l~is~~-ht~~dId~~l~~l~~~l~~~~~ 408 (431)
T PRK06209 344 RPCCLTYSTLDGNGQPSQAFRTLFLQETI-RRGVLMPS---------LVVSYA-HGDADIERTIDAVHGALGVYRK 408 (431)
T ss_pred ceEEEEEecCCcccCCcHHHHHHHHHHHH-HCCccccc---------cccccc-CCHHHHHHHHHHHHHHHHHHHH
Confidence 22222111 111111 124556665 78997622 466644 5999999999999999998843
No 351
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.80 E-value=1.6e-16 Score=159.31 Aligned_cols=341 Identities=12% Similarity=0.045 Sum_probs=213.2
Q ss_pred CeEEcCCCC--CCCC--CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHH
Q 015768 31 NAVSLAQGV--VYWQ--PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNI 105 (400)
Q Consensus 31 ~~i~~~~~~--~~~~--~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~ 105 (400)
.++|+..+. ..++ .+|++.+++.+.+.+...... . .-..+-..++++.|.+..+-+ .+.++|+++|++|++.+
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~-~-~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~A 443 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMF-P-ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVA 443 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcccc-C-ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHH
Confidence 678887764 3444 489999999999887421111 1 112344556777776532211 36899999999999999
Q ss_pred HHHhcC---------------------CCCEEEEeCCCccchhHHHHhcCc---------EE------EEec-cCC----
Q 015768 106 VLTLCD---------------------AGDSVVMFAPYYFNSYMSFQMTGV---------TH------ILVG-PCS---- 144 (400)
Q Consensus 106 ~~~l~~---------------------~gd~vlv~~p~~~~~~~~~~~~g~---------~~------~~~~-~~~---- 144 (400)
++...+ ...+|+....+|++........+. .. ..+. |..
T Consensus 444 lKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~ 523 (817)
T PLN02974 444 LKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRN 523 (817)
T ss_pred HHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccc
Confidence 987621 124699999999885533322211 00 0110 100
Q ss_pred -------CCC-----------CC-----C------------CHHHHHHhhcc------CCCCeEEEEeCC-CCCCccC-C
Q 015768 145 -------SKT-----------LH-----P------------DADWLEKTLET------KPTPKLVSVVNP-GNPSGTY-I 181 (400)
Q Consensus 145 -------~~~-----------~~-----~------------~~e~l~~~l~~------~~~~~~v~l~~p-~nptG~~-~ 181 (400)
+.+ |. . .++.+++.|.. ...+.+++++.. +...|++ +
T Consensus 524 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~ 603 (817)
T PLN02974 524 GRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLI 603 (817)
T ss_pred ccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccC
Confidence 000 00 0 02456666642 233677887753 6767875 5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHH-
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK- 259 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~- 259 (400)
+.++++++.++|++||+++|.||++.+|...|..+.....+...-+-.++|.++ +| +++|.++.+ +++.+.+..
T Consensus 604 ~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLt-gG~~Plaa~l~~---~~I~~~f~~~ 679 (817)
T PLN02974 604 DPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLT-GGLVPLAATLAT---EEVFEAFRGP 679 (817)
T ss_pred CHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeeccccc-CCCCccEEEEEc---HHHHHhhccc
Confidence 788999999999999999999999998876554332222222222445689997 78 699999998 788877742
Q ss_pred -----hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHH----HHhccCCCCcccCCCCceEEEeeCCC
Q 015768 260 -----VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIR----EALSPLGEGAVKGGEGAIYLWARLPE 328 (400)
Q Consensus 260 -----~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~----~~L~~~~~~~~~~~~~~~~~~~~~~~ 328 (400)
+.+..+++.++++..++.+.|+..+ +...+..+...+..+.+. +.|++++.+.-+... |.+.-+.+..
T Consensus 680 ~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~-Gl~~~iel~~ 758 (817)
T PLN02974 680 SKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSL-GTVLALELDA 758 (817)
T ss_pred cccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEee-eeEEEEEEec
Confidence 2356789999999999998887522 222333444444444444 344455543334444 5666666542
Q ss_pred CCC-------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 329 KHL-------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 329 ~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
... ....+...++.++||++++. .+.+|+.... ++++++++++++|.+.+
T Consensus 759 ~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 759 EGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 110 12345555543799999873 3688886555 89999999999998876
No 352
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.5e-17 Score=143.14 Aligned_cols=334 Identities=13% Similarity=0.135 Sum_probs=228.6
Q ss_pred cCCCeEEcCCCCCCC---CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGVVYW---QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~---~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
.|+.++||=++.+.. .-+|.+++++.+..++-...+ ..-...+.-+.++++.+.+| .+.++-++.+.+|.+.
T Consensus 57 eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlss---rafYnd~~~~f~~~vt~lf~--~~kvlpmnTGaEa~Et 131 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSS---RAFYNDVLGEFAEYVTKLFG--YDKVLPMNTGAEAVET 131 (427)
T ss_pred CccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhh---HHHhhhhHHHHHHHHHHhcC--cceeeecccchhHHHH
Confidence 457788886665333 368999999999888632221 12234556677777777766 4667778888999999
Q ss_pred HHHHhc------C--CCC--EEEEeCCCccchhHHHHhcCcEEE-------EeccCCCC--CCCCCHHHHHHhhccCCCC
Q 015768 105 IVLTLC------D--AGD--SVVMFAPYYFNSYMSFQMTGVTHI-------LVGPCSSK--TLHPDADWLEKTLETKPTP 165 (400)
Q Consensus 105 ~~~~l~------~--~gd--~vlv~~p~~~~~~~~~~~~g~~~~-------~~~~~~~~--~~~~~~e~l~~~l~~~~~~ 165 (400)
++...+ + |.+ .|+....+|++-...+-.++.+.- ++ |.+.+ .+. |+++|+..++... .
T Consensus 132 a~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~-P~~~~~v~Y~-d~eale~~l~~~~-v 208 (427)
T KOG1402|consen 132 ACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFL-PGVVDKVPYG-DAEALEVALKSPN-V 208 (427)
T ss_pred HHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCC-CCcceeeccC-CHHHHHHHhcCCC-e
Confidence 998765 2 322 344445555442211111111110 00 11000 111 7899999998643 5
Q ss_pred eEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC---CcEEEEeccccccCCCc-ce
Q 015768 166 KLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVNLFSFSKAYGMMG-WR 240 (400)
Q Consensus 166 ~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~g~~g-~~ 240 (400)
++.+++..+...|++ +|+..+.+..++|++||+++|.||++.++...|.-. ..++ ..++++ +.|+++ +| .+
T Consensus 209 aaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l-a~d~env~PDivi--lgKalS-GG~~P 284 (427)
T KOG1402|consen 209 AAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL-ACDYENVRPDIVI--LGKALS-GGVYP 284 (427)
T ss_pred eEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE-EeehhhcCCCeEE--Eecccc-CCeee
Confidence 677766668889975 677799999999999999999999999887766322 2221 122332 359997 44 57
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-----CcccC
Q 015768 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-----GAVKG 315 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-----~~~~~ 315 (400)
++.++++ +++.-.++...+..+++.|+++..++.++|+.-. -++..++..++.+.|++.|.+++. ++.++
T Consensus 285 vsavl~~---~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~--eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VR 359 (427)
T KOG1402|consen 285 VSAVLAD---DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIV--EEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVR 359 (427)
T ss_pred eEEEEec---HHHHhccCCCccccccCCChHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccccccchhheee
Confidence 8888888 6777778887888899999999999999998522 256777888888999999988754 23444
Q ss_pred CCCceEEEeeCC---CCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLP---EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 316 ~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
.. |++.-+.+. ....+..+++-.+ +++|++..|-. .+-|||.+.. ++++|++++++.+.+++.
T Consensus 360 Gr-Gl~~ai~i~~~~~~~~~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 360 GR-GLLNAIVINPSKTSGQDAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cc-ceEEEEEeccccccchhHHHHHHcc-cccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 55 666655554 2334667777766 58999988743 6799999887 899999999999998874
No 353
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.79 E-value=3.3e-18 Score=149.41 Aligned_cols=283 Identities=21% Similarity=0.250 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHHHHHHhcCC------CCEEEEeCCCccchhHHHHhcCcEEEEecc
Q 015768 71 PELRDALVKKLNQENKL--YKSSVMVTAGANQAFVNIVLTLCDA------GDSVVMFAPYYFNSYMSFQMTGVTHILVGP 142 (400)
Q Consensus 71 ~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~ 142 (400)
++|.+.|.+.-....+. +...|++.+|+|+.++.++.+|... --.|+...|.|+.+.............+ .
T Consensus 46 ~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w-~ 124 (363)
T PF04864_consen 46 PELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW-A 124 (363)
T ss_dssp HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE-E
T ss_pred HHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc-c
Confidence 45555555544444443 4678999999999999999999632 1379999999998887654433222222 1
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD 222 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 222 (400)
-|...|. + +..+.+-.=+++.||||.|.+- +.++ +..+..+|.|-||.+-.+..... ..+
T Consensus 125 Gda~~~~-~--------~~~~~~~IElVTSPNNPDG~lr-----~~V~---~g~~~k~I~D~AYYWPhyTpI~~---~aD 184 (363)
T PF04864_consen 125 GDASNFK-N--------SDNPSPYIELVTSPNNPDGQLR-----EAVL---NGSSGKVIHDLAYYWPHYTPITA---PAD 184 (363)
T ss_dssp EECCCGT-T---------S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS---S----B-
T ss_pred ccHHhhc-c--------CCCCCCeEEEEeCCCCCccccc-----chhc---CCCCcceeeeeeeecccccccCC---CCC
Confidence 2222221 0 0111123447789999999863 2222 34567789999999876654332 246
Q ss_pred cEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC----Cc------HHHHHHHH
Q 015768 223 HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT----GP------EWVTERVK 292 (400)
Q Consensus 223 ~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~------~~~~~~~~ 292 (400)
.++.++|+||.-|.+|.|+||.+.+| +++.+++..+....+.+++.=+|.-++..|.. .. +.+.--.+
T Consensus 185 ~DiMLFT~SK~TGHAGSR~GWAlVKD--~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~ 262 (363)
T PF04864_consen 185 HDIMLFTLSKLTGHAGSRFGWALVKD--EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYS 262 (363)
T ss_dssp -SEEEEEHHHHCS-GGG-EEEEEES---HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHH
T ss_pred CceEEEEEecccCccccccceeeecC--HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHH
Confidence 67999999999999999999999888 89999999988888899998888888777764 11 23444445
Q ss_pred HHHHHHHHHHHHhccCCC--------------CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-CC
Q 015768 293 DLVRNREIIREALSPLGE--------------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-CR 357 (400)
Q Consensus 293 ~~~~~~~~l~~~L~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~ 357 (400)
.++++..+|++.+..-.. .++..| +..|.|+++... .++=|...+++.||..+.|..|+ .+
T Consensus 263 ~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~p-sPafAWlkCe~e---ed~DC~~~l~~~~I~tr~G~~fga~~ 338 (363)
T PF04864_consen 263 TMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREP-SPAFAWLKCERE---EDEDCYAVLREAKIITRSGVLFGADS 338 (363)
T ss_dssp HHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE----SEEEEEESSC---GGSSHHHHHHCTTEEEEEGGGGTS-T
T ss_pred HHHHHHHHHHHHHHhcCceecCcCCchhccccccccCC-CCCeEEEecCCc---ccccHHHHHHhCCcccCCCCccCCCC
Confidence 566677778777774321 122223 378999999853 22234445569999999999998 57
Q ss_pred CeEEEEeccCCHHHHHHHHHHHHH
Q 015768 358 GHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 358 ~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
.++|+|+-. ++++++.++++|.+
T Consensus 339 ryVRlSml~-~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 339 RYVRLSMLK-RDDDFDQLLERLSK 361 (363)
T ss_dssp TEEEEESSS--HHHHHHHHHHHHC
T ss_pred CeEEEeccC-CHHHHHHHHHHHHh
Confidence 899999986 89999999999975
No 354
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.77 E-value=1.8e-15 Score=151.79 Aligned_cols=315 Identities=15% Similarity=0.073 Sum_probs=209.3
Q ss_pred CCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC--------CCCEEEEeCCCccchhHH
Q 015768 61 ISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD--------AGDSVVMFAPYYFNSYMS 129 (400)
Q Consensus 61 ~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~--------~gd~vlv~~p~~~~~~~~ 129 (400)
..+|.|. +|..++..++.+|+.+..|.+. .-+..+++++|....+.++.. ..++|+++...|......
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPas 594 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFDA-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPAS 594 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCCC-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHH
Confidence 5566543 5677888999999999999873 334445566666555555432 236799999999888888
Q ss_pred HHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 015768 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208 (400)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~ 208 (400)
++..|++++.+ |.+++| .+|+++|++.+++ ...+++|++++|+| +|.+.+. +++|+++|+++|.++++|.++..
T Consensus 595 a~~~G~~Vv~V-~~d~~G-~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~--I~eI~~iah~~G~~v~VDgAq~~ 669 (939)
T TIGR00461 595 AAMAGMQVVPV-NCDQDG-NIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT--IQHACDIVHSFGGQVYLDGANMN 669 (939)
T ss_pred HHHCCCEEEEe-ccCCCC-CcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc--HHHHHHHHHHcCCEEEEEecChh
Confidence 88999999999 887665 7899999999974 23358999999999 6776432 89999999999999999999864
Q ss_pred cccCCCCccccCCCcEEEEeccccccC----CCcceeEEEEccCCcHHHHHHHHHh---------------hccCC-cCc
Q 015768 209 FMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLLKV---------------QDNIP-ICA 268 (400)
Q Consensus 209 ~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~G~i~~~~~~~~~~~~l~~~---------------~~~~~-~~~ 268 (400)
.... .......+.|++++|.+|+|+ .+|..+|.+.++ +.+...+... ....+ ...
T Consensus 670 al~~--l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr---~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g 744 (939)
T TIGR00461 670 AQVG--LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---SHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYG 744 (939)
T ss_pred hCCC--CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEh---hhchhhcCCCcccccccCCCCccccccccccccC
Confidence 2211 112234578899999999774 345668999988 3443333210 00001 112
Q ss_pred cHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc--eEEEeeCCC----CCCCHHHHHHHHH
Q 015768 269 SIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA--IYLWARLPE----KHLDDFEVVRWLA 341 (400)
Q Consensus 269 ~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~l~ 341 (400)
+......+..++.. |.+.+++..+....+++++.+.|++...+...++.+. .=+.++++. ...+..++..+|+
T Consensus 745 ~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~ 824 (939)
T TIGR00461 745 SASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQ 824 (939)
T ss_pred cHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHH
Confidence 22222333333332 5577888888899999999999987432122211111 114455552 1246788999997
Q ss_pred HhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 342 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 342 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++|+.... ..|-..+.+-|.++- .+.+|+|++++.+.+.-++..+
T Consensus 825 -d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 825 -DYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred -hCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 89998533 223233444444443 6999999999999888777654
No 355
>PLN02452 phosphoserine transaminase
Probab=99.77 E-value=8e-16 Score=142.18 Aligned_cols=325 Identities=13% Similarity=0.124 Sum_probs=216.3
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCC-----C-CCCCCCCCcHHHHHHHHHHHHhhcCCCCC-c-EEEeCChHHHHH
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPS-----I-SKYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFV 103 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-----~-~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~-i~~~~g~t~a~~ 103 (400)
.++|+.| +...|++|++++.+.+.+.. . .....+....++.+.+.+.+.+.++++.+ + +++..|+|.+++
T Consensus 8 ~~~f~pG--P~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e 85 (365)
T PLN02452 8 VFNFSAG--PATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA 85 (365)
T ss_pred eEeeeCC--CCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence 4566655 23467999999988764311 1 11113444567888888888888887532 4 455688999999
Q ss_pred HHHHHhcCCCCEEEEeCCCccc--hhHHHHhcCcEEEEec-cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768 104 NIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVG-PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 104 ~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~-~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~ 180 (400)
.+...+..+|+++++...++++ +.+.++..|...+... +.......++++++ +..+..+.|.+++....||+.
T Consensus 86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~hnETstGv~ 161 (365)
T PLN02452 86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELTPDAKFVHICANETIHGVE 161 (365)
T ss_pred HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCCCCCcEEEECCCCCCCcEe
Confidence 9999999999999888877766 4467777886433321 11111123455554 323346889999888899995
Q ss_pred -CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 181 -IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 181 -~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
.+ +.++. ++++++|.+.+.+ +.+......+ +...|.+|.+|.+| +|.++.+ +++.+++..
T Consensus 162 ~~~---~~~i~------~~~lvVDa~Ss~g---~~pidv~~~~--v~~~saqK~lGP~G--l~~v~vr---~~~l~~~~~ 222 (365)
T PLN02452 162 FKD---YPDVG------NVPLVADMSSNFL---SKPVDVSKYG--VIYAGAQKNVGPSG--VTIVIIR---KDLIGNARP 222 (365)
T ss_pred cCc---ccccC------CCeEEEECCcccc---CcccCHHHcC--EEEEecccccCCCC--eEEEEEc---HHHHhhccc
Confidence 65 44443 3899999998843 3344343344 34469999998777 6888888 666655432
Q ss_pred hh------------ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCC-cc-cCC--CCceE
Q 015768 260 VQ------------DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AV-KGG--EGAIY 321 (400)
Q Consensus 260 ~~------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~-~~~--~~~~~ 321 (400)
.. ....++++....+++..+|+.-.+ .++.+.++.+++++.+++.|++..++ .. ..+ .+.+.
T Consensus 223 ~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~ 302 (365)
T PLN02452 223 ITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMN 302 (365)
T ss_pred CCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeE
Confidence 11 122357888888888888874222 47888899999999999999986432 11 111 24566
Q ss_pred EEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 322 LWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
+.+.++... ..+++...+ +++|+...+|..-. +.+|+|+-. ++.++++.+++.++++-++
T Consensus 303 vsF~~~~~~-~~~~f~~~~-~~~g~~~~~G~r~~--gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 303 VPFTLGGSE-LEAEFVKEA-AKAGMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEEEcCCch-hHHHHHHHH-HHCCCcccCCcccc--CceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 777777643 456677665 69999999987432 349999665 8888877777776666543
No 356
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.77 E-value=4.5e-16 Score=137.27 Aligned_cols=337 Identities=15% Similarity=0.128 Sum_probs=218.3
Q ss_pred hcCCCeEEcCCCCC--CC-CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHH
Q 015768 27 RGAKNAVSLAQGVV--YW-QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (400)
Q Consensus 27 ~~~~~~i~~~~~~~--~~-~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a 101 (400)
++|+.+.|+-.|.. .. .-+|++.+++.+.+..-. ...|.. .-..++.++++..+ --+-+.++|++++++|
T Consensus 47 e~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~-~pi~~~Ae~L~s~~----P~~l~~vfF~nsGsEA 121 (442)
T KOG1404|consen 47 EEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLN-PPIHDLAEALVSKL----PGDLKVVFFVNSGSEA 121 (442)
T ss_pred CCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccC-CcHHHHHHHHHHhC----CCCceEEEEecCCchH
Confidence 55677888877763 23 368999999998885421 334432 22445555555544 3334669999999999
Q ss_pred HHHHHHHhc--CCCCEEEEeCCCccchhHHH-HhcCcEEEEe-------------ccCCCCCC-CCC---------HHHH
Q 015768 102 FVNIVLTLC--DAGDSVVMFAPYYFNSYMSF-QMTGVTHILV-------------GPCSSKTL-HPD---------ADWL 155 (400)
Q Consensus 102 ~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~-~~~g~~~~~~-------------~~~~~~~~-~~~---------~e~l 155 (400)
++.+++... ...-.|+....+|++..... -..+...... +|....+. .-+ .+++
T Consensus 122 Nelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l 201 (442)
T KOG1404|consen 122 NELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKEL 201 (442)
T ss_pred HHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHH
Confidence 999998864 22246666777776644332 2222211111 01111110 000 2445
Q ss_pred HHhhc---cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768 156 EKTLE---TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS 231 (400)
Q Consensus 156 ~~~l~---~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s 231 (400)
++.+. +.+ +.+.+.+..+...|.+ +++..+++..++|+++|.++|.||++.+|...|.-+.....+.+..+-|++
T Consensus 202 ~d~i~~~~~~~-vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmA 280 (442)
T KOG1404|consen 202 EDLILYDGPET-VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMA 280 (442)
T ss_pred HHHHHhcCCCc-eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHH
Confidence 55554 333 5666666667777775 688899999999999999999999999988777434444556666677999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhh-ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE 310 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (400)
|.+| .|+++|.+++. +++.+-+.+.. ..++++.++++..++.+.|+-.. .++..+.......+|.+.|.++..
T Consensus 281 KgiG-nG~Pl~AVvtt---~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vik--ee~LqE~aa~vG~yl~~~l~~l~d 354 (442)
T KOG1404|consen 281 KGIG-NGFPLGAVVTT---PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIK--EENLQENAAEVGSYLLEKLAALKD 354 (442)
T ss_pred hhcc-CCCcceeeecC---HHHHHHHHhccccccccCCCchhHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHhh
Confidence 9998 88999999999 89988888766 67889999999999888887422 134455556666777777665432
Q ss_pred ----CcccCCCCceEEEeeCCCCC--------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768 311 ----GAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD 377 (400)
Q Consensus 311 ----~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~ 377 (400)
+--++.. |.++-+.+-+.. .....+.+.+ ++.|+.+.-|..+ .+.+||++.. .|.+|++.+++
T Consensus 355 ~h~iIGdVRG~-GLm~GvE~V~dk~~~~pp~~~~~~~i~~~c-ke~Gvlvg~g~i~--G~vfriaPPlciT~edi~f~~~ 430 (442)
T KOG1404|consen 355 KHPIIGDVRGR-GLMLGVELVSDKSEPKPPATAEGAVIGEQC-KELGVLVGKGGIH--GNVFRIAPPLCITKEDIDFAVE 430 (442)
T ss_pred cCCceeecccc-eeEEEEEEecccCCCCCcchHHHHHHHHHH-HHhCeeeeccccc--ceEEEecCCeeccHHHHHHHHH
Confidence 2222333 555544432111 1223344444 5899999666654 3499999776 89999977666
Q ss_pred HH
Q 015768 378 RL 379 (400)
Q Consensus 378 ~l 379 (400)
..
T Consensus 431 ~~ 432 (442)
T KOG1404|consen 431 YF 432 (442)
T ss_pred HH
Confidence 54
No 357
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.76 E-value=3.3e-18 Score=152.80 Aligned_cols=249 Identities=18% Similarity=0.204 Sum_probs=165.2
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCc
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~ 123 (400)
++|++++++.+..... . .|+......++++.+++.+ | .+..+|++++|.|+.++++++++|++.|++..++|
T Consensus 7 ~~~~m~~a~~~a~~gd-~-~Yg~D~~~~~l~~~i~~l~----g--~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aH 78 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGD-D-AYGEDPTTARLEERIAELF----G--KEAALFVPSGTMANQLALRAHLRPGESVICADTAH 78 (290)
T ss_dssp S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHH----T--SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEH
T ss_pred CCHHHHHHHHccccCC-c-ccCCChhHHHHHHHHHHHc----C--CCEEEEeCCCChHHHHHHHHHHhcCCceeccccce
Confidence 6799999996655433 2 4766655666666666655 5 45668999999999999999999999999999988
Q ss_pred cchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCC-CccCCCHHHHHHHHHHHHH
Q 015768 124 FNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNP-SGTYIPERLLKRISDLCKA 195 (400)
Q Consensus 124 ~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~np-tG~~~~~~~l~~i~~l~~~ 195 (400)
.... ......|++++.+ +.+++| .+++++|++.+.. .+++++|+|++++|. .|.+++.+++++|.++|++
T Consensus 79 i~~~E~ga~~~~~G~~~~~l-~~~~~G-~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~ 156 (290)
T PF01212_consen 79 IHFDETGAIEELSGAKLIPL-PSDDDG-KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELARE 156 (290)
T ss_dssp HHHSSTTHHHHHTTCEEEEE-BECTGT-BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHH
T ss_pred eeeeccchhhHhcCcEEEEC-CCcccC-CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHh
Confidence 5444 2235689999988 666534 7899999999974 244799999999885 4899999999999999999
Q ss_pred cCCEEEEcccccccccCC--CCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCcc---H
Q 015768 196 AGSWLVVDNTYEYFMYDG--RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS---I 270 (400)
Q Consensus 196 ~~~~li~D~a~~~~~~~~--~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~---~ 270 (400)
||+.++.|.+...-.... ..........+++..|++|..|+++ .+.++.+ ++++++....+......+. .
T Consensus 157 ~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~--Gavl~~~---~~~i~~~~~~~k~~gg~~~~~G~ 231 (290)
T PF01212_consen 157 HGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPG--GAVLAGN---KEFIAKARRQRKRLGGGMRQAGV 231 (290)
T ss_dssp HT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSS--EEEEEES---HHHHHHHHHHHHHHTHHHHHTTH
T ss_pred CceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEccccccc--ceEEEec---hHHHHHHHHHHHHhccCeeecce
Confidence 999999999965333211 0111112456688889999987654 2556666 6655444333321111111 1
Q ss_pred HHH-----HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 271 ISQ-----HLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 271 ~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
+.. .++...++. | .....+..++.+++.+.|+.++..
T Consensus 232 ~~a~~~~~~~~l~~l~~---~-~~~~~~~~~~A~~La~~l~~~~~~ 273 (290)
T PF01212_consen 232 LAAAELYQFAALRALEL---W-LERARHANAMAKRLAAGLEALGGV 273 (290)
T ss_dssp HHHHHHHHHHHHCHEEC---S-HHHHHCHHHHHHCHHHCHHEECEE
T ss_pred eeeechhhHHHHHHHHh---h-HHHHHHHHHHHHHHHHHHHHCCCc
Confidence 111 133333333 2 455566777789999999998873
No 358
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=1.8e-16 Score=139.55 Aligned_cols=338 Identities=16% Similarity=0.125 Sum_probs=237.0
Q ss_pred hcCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH
Q 015768 27 RGAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN 99 (400)
Q Consensus 27 ~~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t 99 (400)
-+|+++++|.+.+ ..+.-.+++.+.....+++.. .+-|+.-.-...+.+.+++++ |+ .+.++ .+-+-
T Consensus 91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G~-E~aiv-Ys~gF 164 (467)
T KOG1358|consen 91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----GT-EDAIV-YSYGF 164 (467)
T ss_pred ecCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----CC-cceee-ecccc
Confidence 3567888887765 667778888888877777643 344666666778889999998 53 34444 44555
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC----------C-CeEE
Q 015768 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----------T-PKLV 168 (400)
Q Consensus 100 ~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~----------~-~~~v 168 (400)
.++..++.++++.||.|.+..-..++....++.....+.++.+ .|+++++..+.+.+ . .+-|
T Consensus 165 ~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfi 237 (467)
T KOG1358|consen 165 STIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFI 237 (467)
T ss_pred chhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccceEEE
Confidence 8899999999999999999999998999888888878777722 26777777664221 1 2445
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----cc-ccCCCcEEEEeccccccCCCcceeE
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HC-CVEGDHVVNLFSFSKAYGMMGWRVG 242 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~-~~~~~~~i~~~s~sK~~g~~g~~~G 242 (400)
++..-..++|.+.| +.+|.++..++...+|.||.++.+..+... +. ....+.+++++|+.-+++..| |
T Consensus 238 v~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---g 311 (467)
T KOG1358|consen 238 VVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---G 311 (467)
T ss_pred EEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---c
Confidence 66666778999999 888888989999999999999866654321 11 223567899999988886444 7
Q ss_pred EEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEE
Q 015768 243 YIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYL 322 (400)
Q Consensus 243 ~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 322 (400)
+.+++. ....++++.....-++-+.++....++..++.. .+|-.++.+.++.....+.++|+......+.+..-+...
T Consensus 312 Fc~G~~-~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i-~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~ 389 (467)
T KOG1358|consen 312 FCAGKS-FIADHQRLSGSGYCFSASLPPYLAGAAIKAILI-EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPII 389 (467)
T ss_pred eeecce-eeEeeeeccccceeeeccCchhhhhhHHHHHHH-HhhCcchhhhhhccccccchhhhcCCceEEecCcCCcee
Confidence 776652 123345665555444555677777777777765 344456667777777778888888665566655546666
Q ss_pred EeeCCCCCCC-------HHHHHHHHHHhcCeEEeCCCcc------CCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 323 WARLPEKHLD-------DFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 323 ~~~~~~~~~~-------~~~~~~~l~~~~gi~v~~g~~~------~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+.+...... .+++++..+.+ ++.+.....- --+..||+++.. +++++++++...+++...++
T Consensus 390 hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 390 HLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred eeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 6776543211 23455555544 8777544322 125689999998 99999999999999987764
No 359
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.72 E-value=8.5e-17 Score=148.37 Aligned_cols=270 Identities=16% Similarity=0.146 Sum_probs=173.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||..+. ..++ .+|++.+++.+.+.+.... .......+...++++.|.+..+-..+++++++++++|++
T Consensus 13 ~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~--~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve 90 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYV--SFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVE 90 (339)
T ss_dssp TTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSC--STTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHH
T ss_pred CCCCEEEECCCCccceecCCCccccchhHHHHhhhcccc--cccceeccchhhhhhhhhhccccccceeeeccCchHHHH
Confidence 4578899998764 5554 6899999999988764321 112334556777888887777445689999999999999
Q ss_pred HHHHHhc------C--CCCEEEEeCCCccchhHHHHh-cC------------cEEEEeccCCCCCC----CCCHHHHHHh
Q 015768 104 NIVLTLC------D--AGDSVVMFAPYYFNSYMSFQM-TG------------VTHILVGPCSSKTL----HPDADWLEKT 158 (400)
Q Consensus 104 ~~~~~l~------~--~gd~vlv~~p~~~~~~~~~~~-~g------------~~~~~~~~~~~~~~----~~~~e~l~~~ 158 (400)
.+++... . ...+|+....+|++....... .+ ..+..+ |.++... ....+.+++.
T Consensus 91 ~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~ 169 (339)
T PF00202_consen 91 AALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFV-PFPDPAADEEEQACLNALEEL 169 (339)
T ss_dssp HHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEE-ETTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccc-cCCccchhhhHHHHHHHHHHH
Confidence 9999876 2 337899999999886543222 11 122333 3321100 0001123333
Q ss_pred hc--cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccc
Q 015768 159 LE--TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKA 233 (400)
Q Consensus 159 l~--~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~ 233 (400)
+. ....+.+++++..+...|. .++.+.+++|.++|++||+++|+||++.++...|..+... .-..|++ +++|.
T Consensus 170 ~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv--~~gK~ 247 (339)
T PF00202_consen 170 IAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIV--TFGKG 247 (339)
T ss_dssp HHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEE--EEEGG
T ss_pred HHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCccc--ccccc
Confidence 22 2223578888866655665 5678899999999999999999999999886555432211 1123454 44699
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
++ .|+++|.++.+ +++.+.+.......+++.++++..++.+.|+..++ .+..++..+..+++.+.|++
T Consensus 248 l~-gG~p~sav~~~---~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~--~~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 248 LG-GGLPISAVLGS---EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEE--EDLLERVRELGERLREGLRE 315 (339)
T ss_dssp GG-TTSSEEEEEEE---HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHH
T ss_pred hh-hhhhccccccc---chhhccccccccccccccchHhhhhhhhHHHhhcc--HHHHHHHHHHHHHHHHHHHH
Confidence 97 67999999999 78877775555667888899999999988885221 22344445555555555543
No 360
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.72 E-value=1.4e-15 Score=141.45 Aligned_cols=273 Identities=16% Similarity=0.189 Sum_probs=183.6
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-------CcEEEeCChHHHHHHHHHHhcC-----
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-------SSVMVTAGANQAFVNIVLTLCD----- 111 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-------~~i~~~~g~t~a~~~~~~~l~~----- 111 (400)
.+..++..+....-+.+...|...+....++.++.+++.+.+|.+. ..-++|+|+|+++..++.+..+
T Consensus 51 ~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~ 130 (373)
T PF00282_consen 51 SPASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPR 130 (373)
T ss_dssp CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhh
Confidence 4566666555555554456666666788999999999999998872 3578999999999988876531
Q ss_pred ---CC------CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc---C-CCCeEEEEeCCCCCCc
Q 015768 112 ---AG------DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---K-PTPKLVSVVNPGNPSG 178 (400)
Q Consensus 112 ---~g------d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~---~-~~~~~v~l~~p~nptG 178 (400)
.| -.|++++-+|+++..++..+|+.++.| |.++++ .+|.++|++.+.. + ..|-+|+.+.++..+|
T Consensus 131 ~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I-~~~~~~-~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G 208 (373)
T PF00282_consen 131 SKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKI-PTDEDG-RMDIEALEKALEKDIANGKTPFAVVATAGTTNTG 208 (373)
T ss_dssp HHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE--BBTTS-SB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred hhhcccccccccccccccccccHHHHhcceeeeEEEEe-cCCcch-hhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence 12 257777889999999999999999999 998865 7899999998862 2 2133566667888999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccccccccc--CCCCcccc-CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
.+-| +.+|.++|+++|+|+++|.+|++..+ ........ -...+=+..++||+++ ....+|++..++ +....
T Consensus 209 a~D~---l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~--~~~l~ 282 (373)
T PF00282_consen 209 AIDP---LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRD--KSDLR 282 (373)
T ss_dssp BB-S---HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESS--GGGHH
T ss_pred cccC---HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhc-CCccceeEEeec--ccchH
Confidence 9988 89999999999999999999997332 11111111 1233455668999997 667899999887 33332
Q ss_pred HHHH----hhc-------------cCCcCc----cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 256 QLLK----VQD-------------NIPICA----SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 256 ~l~~----~~~-------------~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
.... +.. ..+... ..+..++....+ |.+.+.++.++..++++++.+.|++.+.+++.
T Consensus 283 ~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~--G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~ 360 (373)
T PF00282_consen 283 DAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSL--GREGYRERIRRCIELARYLADRLRKDPRFELV 360 (373)
T ss_dssp GGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred HHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 2110 000 001111 223333333332 45778999999999999999999999876776
Q ss_pred CCCCceEEEeeC
Q 015768 315 GGEGAIYLWARL 326 (400)
Q Consensus 315 ~~~~~~~~~~~~ 326 (400)
.+.....+++++
T Consensus 361 ~~~~~~~vcFr~ 372 (373)
T PF00282_consen 361 NEPDLNIVCFRY 372 (373)
T ss_dssp STTSSSEEEEEE
T ss_pred cCCCceEEEEEe
Confidence 655566666654
No 361
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.72 E-value=3.1e-14 Score=139.49 Aligned_cols=298 Identities=14% Similarity=0.088 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCC--C
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--L 148 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~ 148 (400)
....+..+..++.+|.+ ...++++|+|.++.+++.+++++||.|++...||-+..+++...|+.++++.|.. +.| .
T Consensus 195 G~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g 273 (714)
T PRK15400 195 GPHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILG 273 (714)
T ss_pred hHHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 34445555555556753 5567789999999999999999999999999999999999999999999984443 112 1
Q ss_pred CCC-----HHHHHHhhccCCC---CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCC-C-cc
Q 015768 149 HPD-----ADWLEKTLETKPT---PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGR-K-HC 217 (400)
Q Consensus 149 ~~~-----~e~l~~~l~~~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~-~-~~ 217 (400)
.++ .+.+++.+...+. |+.++|++|+ -.|.+.+ +++|.++|+.++ +++||||+... +... + ..
T Consensus 274 ~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~s 347 (714)
T PRK15400 274 GIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKC 347 (714)
T ss_pred CCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcccCCcC
Confidence 234 7899999874433 3378888884 4799999 888888888777 68999987443 2221 1 11
Q ss_pred ccCC-----CcEEEEeccccccCCCcceeEE-EEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCc-HHHHH
Q 015768 218 CVEG-----DHVVNLFSFSKAYGMMGWRVGY-IAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGP-EWVTE 289 (400)
Q Consensus 218 ~~~~-----~~~i~~~s~sK~~g~~g~~~G~-i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 289 (400)
.... +.++++.|.||.+ +++..+. +..+.... .++++.... ..+.+++.+....+..+..... +...+
T Consensus 348 am~~ga~~~~~i~vtQStHKtL--~alTQaS~LHvkg~vd--~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~ 423 (714)
T PRK15400 348 GMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDVN--EETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKR 423 (714)
T ss_pred hhhcCCCCCCceEEEEchhhcc--cchhHHhHHHHcCCCC--HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHH
Confidence 1211 3348899999998 4554443 43332111 233433222 2344555444433333322111 12344
Q ss_pred HHHHHHHHHHHHHHHhccCCC------CcccCCC-----------------------------CceEEEeeCCC------
Q 015768 290 RVKDLVRNREIIREALSPLGE------GAVKGGE-----------------------------GAIYLWARLPE------ 328 (400)
Q Consensus 290 ~~~~~~~~~~~l~~~L~~~~~------~~~~~~~-----------------------------~~~~~~~~~~~------ 328 (400)
..+...+....+++.|.+++. +.+..++ ...-+.+..+.
T Consensus 424 l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~ 503 (714)
T PRK15400 424 LINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGT 503 (714)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEEEEeCCCCCCcc
Confidence 555555566666666655432 2222111 01122333333
Q ss_pred ---CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 329 ---KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 329 ---~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.+..+..+..+| +++||.+.-.. ...+-+-++- .++++++.+++.|.++-+.
T Consensus 504 ~~~~Gipg~~v~~~L-~e~gI~~E~~d----~~~iLfl~s~g~t~~~~~~L~~aL~~f~~~ 559 (714)
T PRK15400 504 MSDFGIPASIVAKYL-DEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (714)
T ss_pred ccccCCCHHHHHHHH-HHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 223466777777 68999997543 3444444443 6899999998888877443
No 362
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=8.2e-16 Score=137.88 Aligned_cols=315 Identities=17% Similarity=0.186 Sum_probs=209.9
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCcc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF 124 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~ 124 (400)
.+.+.+++.+.--.... + ....|..+..+++.+.+++..|. ++.++|.-| -..+...+.+|+.||.-|+-.+-.|.
T Consensus 157 a~~~~~~~~kygl~~cs-s-~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHa 232 (519)
T KOG1357|consen 157 AEASLKSFDKYGLSRCS-S-RHEAGTTEEHKELEELVARFLGV-EDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHA 232 (519)
T ss_pred ChHHHHHHHHhcccccc-c-chhcccHHHHHHHHHHHHHhcCC-cceEEEecc-ccccccCcceeecCCcceeeccccch
Confidence 45566655554332111 0 12244555555555555555564 566777665 45666777889999999999999999
Q ss_pred chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-------cCCC---CeEEEEe-CCCCCCccCCCHHHHHHHHHHH
Q 015768 125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-------TKPT---PKLVSVV-NPGNPSGTYIPERLLKRISDLC 193 (400)
Q Consensus 125 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-------~~~~---~~~v~l~-~p~nptG~~~~~~~l~~i~~l~ 193 (400)
+....++..|+....+ ..+ |+++||+.|+ +++. .|.+++. .-...-|.+.. +.++.+++
T Consensus 233 Si~~GaRLSgAtiRVf-kHN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalk 302 (519)
T KOG1357|consen 233 SLITGARLSGATTRVF-RHN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALK 302 (519)
T ss_pred heeccccccCceEEEE-ecC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhh
Confidence 9999999999988877 332 5666777664 2221 2455554 45667888888 89999999
Q ss_pred HHcCCEEEEcccccccccCCCCc------cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCc-
Q 015768 194 KAAGSWLVVDNTYEYFMYDGRKH------CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPI- 266 (400)
Q Consensus 194 ~~~~~~li~D~a~~~~~~~~~~~------~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~- 266 (400)
+++..+++.||+|+..+.+.... -....+.++.+++|.|++|..| ||+.++ +++++.+........+
T Consensus 303 kkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiags---k~lid~lrt~s~~~~ya 376 (519)
T KOG1357|consen 303 KKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGS---KELIDYLRTPSPSALYA 376 (519)
T ss_pred ccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCc---HHHHhhhccCCCceeec
Confidence 99999999999999777643321 1223577899999999998777 999999 8898888765543222
Q ss_pred --CccHHHHHHHHHHhcC-----CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEe--eCCCCCCCHHHHH
Q 015768 267 --CASIISQHLALYSLQT-----GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWA--RLPEKHLDDFEVV 337 (400)
Q Consensus 267 --~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 337 (400)
.+++..|.. ...++. +.+...+..+++.++..+++..|+..++ .+.+...+.++.+ -.+.. ...+-
T Consensus 377 t~~sppvaqq~-~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gf-ivyG~~dSpVvplll~~~~k---~~~f~ 451 (519)
T KOG1357|consen 377 TSLSPPVAQQI-LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGF-IVYGNNDSPVVPLLLYGPAK---IVAFS 451 (519)
T ss_pred ccCChHHHHHH-HHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcE-EEecCCCCCcceeeecCccc---ccHHH
Confidence 233444433 334442 2355688889999999999999999876 5555444433322 22322 23444
Q ss_pred HHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
++|+ +++|.+.-+.+.. .....|+|.+. ++.|+++.+++.+.++=..
T Consensus 452 r~~l-~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 452 REML-ERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred HHHH-hcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 4565 6777765444332 24677998887 8999999988888776533
No 363
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.72 E-value=1.1e-14 Score=147.95 Aligned_cols=329 Identities=13% Similarity=0.038 Sum_probs=208.0
Q ss_pred HHHHHHHhcCCCeEEcCC-CCCCCCCcHHHHHHHHHhhcC-CCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEe
Q 015768 20 VQIQELVRGAKNAVSLAQ-GVVYWQPPKMAMEKVKELVWD-PSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVT 95 (400)
Q Consensus 20 ~~~~~~~~~~~~~i~~~~-~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~ 95 (400)
..+.++-.....+.+|-. |.-+...|+.+++++.+...- ...++|.+. +|..+...+....+.++.|++++++.++
T Consensus 92 ~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~ 171 (993)
T PLN02414 92 EHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLL 171 (993)
T ss_pred HHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeec
Confidence 333334344444444433 322334667777888776642 225566543 4444444444444556669999999999
Q ss_pred CChHHHHHHHHHHhc-CC--CCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768 96 AGANQAFVNIVLTLC-DA--GDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~-~~--gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v 168 (400)
.++|.+.+.++.++. ++ +++|++++..|+.....+ +..|++++.+ +.+..+ ..... ...+
T Consensus 172 d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v-~~~~~~----------~~~~~--v~~v 238 (993)
T PLN02414 172 DEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVA-DEKDFD----------YSSGD--VCGV 238 (993)
T ss_pred CChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEe-cchhhc----------cccCc--eEEE
Confidence 999999999988874 43 478999999999987665 3468898888 654311 01111 2344
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc---CCCcceeEEEE
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY---GMMGWRVGYIA 245 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---g~~g~~~G~i~ 245 (400)
++..| |.+|.+.| +++|+++|+++|+++++ .++... ..... .....+.|+++++.+|+. |.+|.+.|++.
T Consensus 239 lvq~P-~~~G~v~d---v~~I~~~ah~~GaL~iV-aad~la-l~~l~-~pge~GADi~vgsgqKwg~P~G~GGP~aGfla 311 (993)
T PLN02414 239 LVQYP-ATDGEVLD---YAEFVKNAHANGVKVVM-ATDLLA-LTMLK-PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLA 311 (993)
T ss_pred EEecC-CCCeEEcC---HHHHHHHHHHcCCEEEE-EECHHH-hcCCC-CHhhccCcEEEECCCccccCCCCCCCCeeEEE
Confidence 44444 34899999 99999999999999999 554421 11111 133457789999999987 22355689999
Q ss_pred ccCCcHHHHHHHHH-hhc---------c--------------CCcCccHHHHHHHHHHhc------CCcHHHHHHHHHHH
Q 015768 246 YPSEVEGFATQLLK-VQD---------N--------------IPICASIISQHLALYSLQ------TGPEWVTERVKDLV 295 (400)
Q Consensus 246 ~~~~~~~~~~~l~~-~~~---------~--------------~~~~~~~~~~~~~~~~l~------~~~~~~~~~~~~~~ 295 (400)
++ +++.+.+.. ... . -..+.|.....++.+.+. .+...+++..+++.
T Consensus 312 vr---~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~ 388 (993)
T PLN02414 312 TS---QEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH 388 (993)
T ss_pred EC---HHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 98 555443321 000 0 011334433333333332 12234677778889
Q ss_pred HHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHH
Q 015768 296 RNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKA 374 (400)
Q Consensus 296 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~ 374 (400)
++..++++.|+..+. ++..+.-..-+.++++ +..++.++|. ++||.++... .+.+|+|++. +|++|++.
T Consensus 389 ~la~~l~~~L~~~G~-~~~~~~~f~~vt~~~~----~~~~v~~~L~-~~gI~l~~~~----~~~lrvs~~e~~T~edId~ 458 (993)
T PLN02414 389 GLAGVFAAGLKKLGF-QVQSLPFFDTVKVKCS----DADAIADAAA-KVGINLRVVD----ANTVTVSFDETTTLEDVDK 458 (993)
T ss_pred HHHHHHHHHHhhcCC-ccCCCCCcCeEEEecC----CHHHHHHHHH-HCCCeeEEec----CCeEEEEeeccCCHHHHHH
Confidence 999999999988664 4443322334445554 3577888885 8899876432 4679999998 89999999
Q ss_pred HHHHHHH
Q 015768 375 AADRLRR 381 (400)
Q Consensus 375 ~~~~l~~ 381 (400)
+++.|..
T Consensus 459 L~~~l~~ 465 (993)
T PLN02414 459 LFKVFAG 465 (993)
T ss_pred HHHHHcc
Confidence 9999863
No 364
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.71 E-value=5.9e-14 Score=137.63 Aligned_cols=168 Identities=14% Similarity=0.116 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-HHhcCcEEEEeccCC-CCC--
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCS-SKT-- 147 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~-~~~-- 147 (400)
....+..+..++.+|.+ ...++++|+|.++.+++.+++++||.|++...||-+..+. +...|+.++++.|.. +.|
T Consensus 174 G~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~ 252 (720)
T PRK13578 174 GAAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFI 252 (720)
T ss_pred hHHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCc
Confidence 33445555555556753 5677889999999999999999999999999999999985 889999999984443 222
Q ss_pred CCCCH-----HHHHHhhccC-CC-------CeEEEEeCCCCCCccCCCHHHHHHHHHH-HHHcCCEEEEcccccccc-cC
Q 015768 148 LHPDA-----DWLEKTLETK-PT-------PKLVSVVNPGNPSGTYIPERLLKRISDL-CKAAGSWLVVDNTYEYFM-YD 212 (400)
Q Consensus 148 ~~~~~-----e~l~~~l~~~-~~-------~~~v~l~~p~nptG~~~~~~~l~~i~~l-~~~~~~~li~D~a~~~~~-~~ 212 (400)
..++. +.+++.+... +. .++++|++|+. .|.+.+ +++|+++ ++.++ +|++||||+... +.
T Consensus 253 g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhgah~~F~ 327 (720)
T PRK13578 253 GGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVGYEQFI 327 (720)
T ss_pred CCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchhhhccC
Confidence 13354 4488888744 11 48999998865 799999 8888887 67777 999999997443 32
Q ss_pred CC----CccccCCC----cEEEEeccccccCCCcceeE-EEEcc
Q 015768 213 GR----KHCCVEGD----HVVNLFSFSKAYGMMGWRVG-YIAYP 247 (400)
Q Consensus 213 ~~----~~~~~~~~----~~i~~~s~sK~~g~~g~~~G-~i~~~ 247 (400)
.. +......+ .++++-|.||.+ +++-.+ ++..+
T Consensus 328 p~~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHvk 369 (720)
T PRK13578 328 PMMADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHKK 369 (720)
T ss_pred cccccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhcC
Confidence 21 11112222 348899999998 455544 45444
No 365
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.71 E-value=1.5e-13 Score=134.62 Aligned_cols=297 Identities=13% Similarity=0.043 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCC--C
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT--L 148 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~--~ 148 (400)
....+..+..++.+|.+ ...++++|+|.++.+++.+++++||.|++...||-+..+++...|+.++++.|.. +.| .
T Consensus 195 G~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g 273 (713)
T PRK15399 195 GPHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILG 273 (713)
T ss_pred hHHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcC
Confidence 34444555555556753 5677789999999999999999999999999999999999999999999984443 222 1
Q ss_pred CCCH-----HHHHHhhccCC---CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEcccccccc-cCC-CC-c
Q 015768 149 HPDA-----DWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL-VVDNTYEYFM-YDG-RK-H 216 (400)
Q Consensus 149 ~~~~-----e~l~~~l~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l-i~D~a~~~~~-~~~-~~-~ 216 (400)
.++. +.+++.+...+ +|++++|++|+ -.|.+.+ +++|.++| |+.+ ++||||+... +.. .+ .
T Consensus 274 ~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~ 346 (713)
T PRK15399 274 GIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGK 346 (713)
T ss_pred CCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCcccCCc
Confidence 3344 88998887433 24789999884 4799999 77777777 5666 6999997433 222 11 1
Q ss_pred cccCC--CcE---EEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCc-HHHH
Q 015768 217 CCVEG--DHV---VNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGP-EWVT 288 (400)
Q Consensus 217 ~~~~~--~~~---i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~ 288 (400)
..... +.+ +++-|.||.++ ++.. +++..+... -.++++.... ..+.+++.+....+..+-.... ...+
T Consensus 347 sam~~~~~aD~~i~~tQStHKtL~--alTQaS~iHvk~~v--d~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~ 422 (713)
T PRK15399 347 SGMSGERVPGKVIFETQSTHKMLA--AFSQASLIHIKGEY--DEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGK 422 (713)
T ss_pred ChhhCCCCCCeeeeeeeehhcccc--ccchheeeeecCCC--CHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhH
Confidence 12211 223 44899999984 5544 455554321 1234443322 2344555444443333322111 1234
Q ss_pred HHHHHHHHHHHHHHHHhccCCC------CcccCCC-----------------------------CceEEEeeCC------
Q 015768 289 ERVKDLVRNREIIREALSPLGE------GAVKGGE-----------------------------GAIYLWARLP------ 327 (400)
Q Consensus 289 ~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~-----------------------------~~~~~~~~~~------ 327 (400)
+..+...+....+++.+.++.. +.+..++ ...-+++..+
T Consensus 423 ~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g 502 (713)
T PRK15399 423 RLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQG 502 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCccccc
Confidence 4445555555556655554322 1222110 0112233333
Q ss_pred ---CCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 328 ---EKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 328 ---~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
..+..+..+..+| +++||.+.-.. ...+-+-++- .++++++.+++.|.++-+.
T Consensus 503 ~~~~~Gi~g~~l~~~L-~e~gI~~E~~d----~~~vL~l~s~g~t~~~~~~L~~aL~~f~~~ 559 (713)
T PRK15399 503 NMSEEGIPAALVAKFL-DERGIVVEKTG----PYNLLFLFSIGIDKTKAMGLLRGLTEFKRA 559 (713)
T ss_pred ccccCCCCHHHHHHHH-HHcCCEEEecC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 2234567788877 58899997543 3444444433 5899999998888877544
No 366
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.70 E-value=2.7e-14 Score=130.61 Aligned_cols=323 Identities=14% Similarity=0.089 Sum_probs=208.8
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCCC-----C-CCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEE-eCChHHHHH
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSI-----S-KYGADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFV 103 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~-~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~-~~g~t~a~~ 103 (400)
.++|+.|- ...|++|++++.+.+.+... . ....+....++.+.+.+.|++.++++. .+|++ ..|+|.+++
T Consensus 5 ~~nF~aGP--a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~e 82 (364)
T PRK12462 5 QLNFSGGP--GALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFS 82 (364)
T ss_pred cceecCCC--cCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHH
Confidence 45666652 33579999999988865221 1 111344456777778888888889853 45555 566999999
Q ss_pred HHHHHhcCCCCEEE-EeCCCccc--hhHHHHhcCcEEEEeccC---CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768 104 NIVLTLCDAGDSVV-MFAPYYFN--SYMSFQMTGVTHILVGPC---SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (400)
Q Consensus 104 ~~~~~l~~~gd~vl-v~~p~~~~--~~~~~~~~g~~~~~~~~~---~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt 177 (400)
.+...++.+||+++ +...++++ +.+.++..| ++..+ .. .+.+..++.+.+ +..+..+.|.+++-...+
T Consensus 83 a~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~-~~~~~~~~~~~p~~~~~----~~~~d~~~v~~t~NETst 156 (364)
T PRK12462 83 MIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVV-WDGAASGYRTLPSLAEL----DWDARAPFRHYVSNETVE 156 (364)
T ss_pred HHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEe-cCcCCCCCCcCCCHHHh----ccCCCCcEEEEccCCCCc
Confidence 99999999999665 55556555 446666676 44333 21 112234455554 222234788888777788
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
|+.++ ++.+.+++++|+|.+.+.+ +.+...... +++..+..|.+|.+| ++.++.+ ++..++.
T Consensus 157 Gv~~~--------~~~~~~~~llvvD~sS~~~---s~pid~~~~--dvi~agsQKnlgP~G--ltvvivs---~~al~~~ 218 (364)
T PRK12462 157 GLQFP--------DAAGLPDSPLIADMSSDFM---SRPFDVEAY--GMVYAHAQKNLGPAG--VTVAIIR---RALLERV 218 (364)
T ss_pred eEecC--------cccccCCCeEEEEcCchhh---CCCCChHHc--cEEEeeccccCCCCc--eEEEEEC---HHHHhhc
Confidence 99886 2222368999999998843 333333333 688889999999666 5777777 5555543
Q ss_pred HHh------------hccCCcCccHHHHHHHHHHhcCC-cH--HHHHHHHHHHHHHHHHHHHhccCCCCccc----CCCC
Q 015768 258 LKV------------QDNIPICASIISQHLALYSLQTG-PE--WVTERVKDLVRNREIIREALSPLGEGAVK----GGEG 318 (400)
Q Consensus 258 ~~~------------~~~~~~~~~~~~~~~~~~~l~~~-~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~----~~~~ 318 (400)
... .....++++....+++...|+-- ++ .++.+.++.++.++.+++.+.+.+++... ...+
T Consensus 219 ~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS 298 (364)
T PRK12462 219 PDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARS 298 (364)
T ss_pred cccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcC
Confidence 321 11234578888888888776531 23 57888999999999999999988742211 2234
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
-+.+.++++... ...++... ++++|+.-..|. ..-+.+|+|+-. ++.|.++.+++-++++-+
T Consensus 299 ~mnv~f~~~~~~-l~~~f~~~-a~~~gl~~lkGh--r~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 299 TMNVAFRFRQPR-LDTLFKEQ-STEAGFCGLSGH--RSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred cceEEEEcCCHH-HHHHHHHH-HHHCCCccccCC--cccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 566777776532 24455554 468999886654 345779999766 787766665555555443
No 367
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.70 E-value=2.7e-14 Score=123.21 Aligned_cols=348 Identities=14% Similarity=0.062 Sum_probs=231.5
Q ss_pred chHHHHHHHHHhcCCCeEEcCCCCCCCCCcH---HHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCc
Q 015768 16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPK---MAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSS 91 (400)
Q Consensus 16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~ 91 (400)
......+++.|+...+.|.++.++....++. +.+++......+..+.++. ....=-.+-+.+.+.++.+.|..+.+
T Consensus 16 ~dpl~~lr~~f~lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~E 95 (407)
T COG3844 16 ADPLAKLRDRFALPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGE 95 (407)
T ss_pred cCchhhhHhhccCCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCc
Confidence 5566788899999999999999886664322 2233333333332222222 12223345567777787777999999
Q ss_pred EEEeCChHHHHHHHHHHhc--CCCCEEEEeCCCccchhH-----HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768 92 VMVTAGANQAFVNIVLTLC--DAGDSVVMFAPYYFNSYM-----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~ 164 (400)
++++.+++--++.++.+.. .+|++|++++..-++... ..+..+.. + +-. ..+.++++++.++.+.
T Consensus 96 vvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~---~~~-~~~~P~~~~~~~~dd~- 167 (407)
T COG3844 96 VVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---Y---DLE-GVIAPRALEEAITDDV- 167 (407)
T ss_pred eEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---c---cce-eeeChHHHHHhhccce-
Confidence 9999999888888887765 458888888766544332 22222221 0 111 1345668888888776
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEE
Q 015768 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGY 243 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~ 243 (400)
.+|++++.+.-||..++ +.+|.+++++||++++-|=+|+-+. .+......+.++-+++..|.++ .||-..|.
T Consensus 168 -AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGa---vp~~Lh~~gaDfaigcsyKYLNgGPGapa~l 240 (407)
T COG3844 168 -AVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGA---VPVDLHAAGADFAIGCSYKYLNGGPGAPAGL 240 (407)
T ss_pred -EEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCC---cceeecccCCCeeeeeeceeccCCCCCceeE
Confidence 88888899999999999 9999999999999999999998443 3444556678888999999994 35555554
Q ss_pred EEccCCcHHHHHHHHH-------------------hhccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHH
Q 015768 244 IAYPSEVEGFATQLLK-------------------VQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 244 i~~~~~~~~~~~~l~~-------------------~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~ 303 (400)
.+.++..+.....+.. +.+....+.+..+..++..+|+... -.+.+.+++...+.+++.+
T Consensus 241 ~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fie 320 (407)
T COG3844 241 FVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIE 320 (407)
T ss_pred EeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHH
Confidence 4444311111111110 1111223456666666666666422 1267778888888888888
Q ss_pred HhccCC---CCcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHH
Q 015768 304 ALSPLG---EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKA 374 (400)
Q Consensus 304 ~L~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~ 374 (400)
.++... ..++..|. -|..+.+..| ...+++++|. ++||..- |..|+.+||.|.- ++.+|+-.
T Consensus 321 LvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp----~~~~V~qaLi-~rGVigD----~R~P~vlRfgftPlY~~~~DVw~ 391 (407)
T COG3844 321 LVEARCEYYGLTLVTPRAHEERGSQVSLYHP----HGYQVMQALI-DRGVIGD----FREPDVLRFGFTPLYVSFVDVWD 391 (407)
T ss_pred HHHhccccCCcEEeccchhhhccceeeEecC----cHHHHHHHHH-HcCcccc----ccCCCeeeecCccceechhHHHH
Confidence 887642 23444443 2455666666 4788898886 8999753 3468999999875 89999999
Q ss_pred HHHHHHHHHHHHh
Q 015768 375 AADRLRRGLEELV 387 (400)
Q Consensus 375 ~~~~l~~~l~~~~ 387 (400)
+++.|.++++...
T Consensus 392 AV~~L~evL~t~a 404 (407)
T COG3844 392 AVDALEEVLDTLA 404 (407)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998753
No 368
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.68 E-value=4e-14 Score=144.65 Aligned_cols=304 Identities=14% Similarity=0.072 Sum_probs=197.6
Q ss_pred CcHHHHHHHHHhhc-CCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc-CC--CCEEE
Q 015768 44 PPKMAMEKVKELVW-DPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-DA--GDSVV 117 (400)
Q Consensus 44 ~~~~v~~a~~~~~~-~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~-~~--gd~vl 117 (400)
.|+.+++.+.+.-. -....+|.+ ++|.-+..-++...+.++.|++..++.++.++|++.+.++.++. ++ +++|+
T Consensus 90 ~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vl 169 (954)
T PRK05367 90 TPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFF 169 (954)
T ss_pred CcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEE
Confidence 34445455555321 111344543 24554555555555666679999999999999999999988874 34 48999
Q ss_pred EeCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015768 118 MFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC 193 (400)
Q Consensus 118 v~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~ 193 (400)
+++.+|+.....+ +..|++++.+ +.+++ ++ ..+ ..++++.+| |-+|.+.| +++|+++|
T Consensus 170 v~~~~hP~~~~v~~t~a~~~G~ev~~~-~~~~d-----~~------~~~--~~~vlvq~p-~~~G~i~d---~~~i~~~a 231 (954)
T PRK05367 170 VDDDVHPQTLDVLRTRAEPLGIEVVVG-DAAKA-----LD------HDD--VFGVLLQYP-GTSGEVRD---YTALIAAA 231 (954)
T ss_pred EcCccCHHHHHHHHHHHHhCCCEEEEe-cCccC-----CC------ccc--EEEEEEecC-CCCeeecc---HHHHHHHH
Confidence 9999998877654 5579999988 66432 11 112 355555565 56999998 99999999
Q ss_pred HHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc---CCCcceeEEEEccCCcHHHHHHHHHhhcc-------
Q 015768 194 KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY---GMMGWRVGYIAYPSEVEGFATQLLKVQDN------- 263 (400)
Q Consensus 194 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---g~~g~~~G~i~~~~~~~~~~~~l~~~~~~------- 263 (400)
+++|+++++|..+..+.... .....+.|++++|.+|+. |.+|...|++.++ +++.+.+....-.
T Consensus 232 h~~Gal~~vda~~~Al~~l~---~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr---~~~~r~lpgrivG~s~d~~g 305 (954)
T PRK05367 232 HARGALVAVAADLLALTLLT---PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVR---DAYKRSMPGRIVGVSVDAAG 305 (954)
T ss_pred HHcCCEEEEEehhhhccCCC---ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEEC---HHHHhhCCCCeeeeecccCC
Confidence 99999999998664332211 234457889999999982 1234458999998 5665554311000
Q ss_pred -----------------CCcCccHHHH---HHHHHH--hc-CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768 264 -----------------IPICASIISQ---HLALYS--LQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 320 (400)
Q Consensus 264 -----------------~~~~~~~~~~---~~~~~~--l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 320 (400)
-..+.|.... .++.++ +. .+...+++..++...+..++++.|+..+. ++..+.-..
T Consensus 306 ~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~-~~~~~~~f~ 384 (954)
T PRK05367 306 NPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGL-EVVHDSFFD 384 (954)
T ss_pred CcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCc-ccCCCCCCC
Confidence 0011222221 111111 11 23355677788889999999999987543 443332122
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768 321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLR 380 (400)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~ 380 (400)
.+.++++ .+..++.++|. ++||.+..- .++.+|+|++. +|++|++.+++.|.
T Consensus 385 ~~~~~~~---~~~~~i~~~l~-~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 385 TLTVEVG---GDAAAVLARAL-AAGINLRRV----DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred eEEEeCC---CCHHHHHHHHH-HCCceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 3344543 25788888886 899998431 25689999998 89999999999997
No 369
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.66 E-value=2.3e-13 Score=125.09 Aligned_cols=334 Identities=12% Similarity=0.071 Sum_probs=214.0
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~ 110 (400)
-+|||=+-...-.++++.+++|.. + --.|+.++....+++.+++.+ | .+.+++|..++.+..+++..++
T Consensus 42 V~IDLrSDTgT~apS~~m~aAM~~----G-DD~Y~gdpSv~~Lee~vael~----G--~E~alpthqGRgaE~Il~~~~~ 110 (467)
T TIGR02617 42 VFIDLLTDSGTGAVTQSMQAAMMR----G-DEAYSGSRSYYALAESVKNIF----G--YQYTIPTHQGRGAEQIYIPVLI 110 (467)
T ss_pred eEEECccCCCCCCCCHHHHHHHHc----C-CcccccCchHHHHHHHHHHHh----C--CceEEECCCCchHHHHHHHhhc
Confidence 356664433322367888888876 2 234777778888999999887 4 4568899889999999999998
Q ss_pred C-CCCEEEEeCC-------Cccc-hhHHHHhcCcEEEEeccCC---------CCCCCCCHHHHHHhhccC--CCCeEEEE
Q 015768 111 D-AGDSVVMFAP-------YYFN-SYMSFQMTGVTHILVGPCS---------SKTLHPDADWLEKTLETK--PTPKLVSV 170 (400)
Q Consensus 111 ~-~gd~vlv~~p-------~~~~-~~~~~~~~g~~~~~~~~~~---------~~~~~~~~e~l~~~l~~~--~~~~~v~l 170 (400)
+ |||.+.+..+ .|+. ........|+.++.+ +.+ +...++|++.+++.+++. ..+..+..
T Consensus 111 ~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l-~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~ 189 (467)
T TIGR02617 111 KKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNV-YTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVA 189 (467)
T ss_pred ccccccccccccccccceEEEEecchHHHHHcCceeecc-cchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeee
Confidence 8 7887775443 2222 334567788877665 322 223478999999999842 11233332
Q ss_pred eCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-c---------cCCCCcccc----CCCcEEEEeccccccC
Q 015768 171 VNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF-M---------YDGRKHCCV----EGDHVVNLFSFSKAYG 235 (400)
Q Consensus 171 ~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~-~---------~~~~~~~~~----~~~~~i~~~s~sK~~g 235 (400)
+-. |.-.|.++|.++++++.++|++||+.++.|.+-..- + +.+...... ....+.+..|+||.+|
T Consensus 190 tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglg 269 (467)
T TIGR02617 190 TITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAM 269 (467)
T ss_pred eEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCC
Confidence 222 335689999999999999999999999999986532 2 111111111 1345677889999987
Q ss_pred CC-cceeEEEEccCCcH---HHHHHHHHhh----cc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768 236 MM-GWRVGYIAYPSEVE---GFATQLLKVQ----DN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306 (400)
Q Consensus 236 ~~-g~~~G~i~~~~~~~---~~~~~l~~~~----~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 306 (400)
+| | |++++++ + ++.++.+... .. +..+.+.-.+.+++..|.+..+ ..+.+.-....++|.+.|.
T Consensus 270 ApvG---g~Lag~d--~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~--~~yl~~ri~qv~yl~~~L~ 342 (467)
T TIGR02617 270 VPMG---GLLCFKD--DSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN--LDWLAYRINQVQYLVNGLE 342 (467)
T ss_pred Cccc---ceEEecc--hhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhccc--HHHHHHHHHHHHHHHHHHH
Confidence 55 4 6677776 5 5555544321 11 2234666677777777775321 2333333445567777777
Q ss_pred cCCCCcccCCCCceEEEee-------CCCCCCCHHHHHHHHHHhcCeEEeC-CCcc-C---------C--CCeEEEEecc
Q 015768 307 PLGEGAVKGGEGAIYLWAR-------LPEKHLDDFEVVRWLAHRHGVVVIP-GGAC-G---------C--RGHLRISFGG 366 (400)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~-~---------~--~~~iRi~~~~ 366 (400)
+.|. .+.. .+|.-++++ +|.....+..++.+|..+.||--.. |+.. + . -..+|+++.+
T Consensus 343 ~~Gv-pi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipR 420 (467)
T TIGR02617 343 EIGV-VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPR 420 (467)
T ss_pred hCCC-cEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeecccc
Confidence 7665 3333 456666554 2222235778888888899988532 3321 1 0 1479999886
Q ss_pred --CCHHHHHHHHHHHHHHHHH
Q 015768 367 --LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 367 --~~~~~~~~~~~~l~~~l~~ 385 (400)
-|.+-++..++++....++
T Consensus 421 rvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 421 ATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ccccHhHHHHHHHHHHHHHhh
Confidence 6788888888888777665
No 370
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.66 E-value=5.8e-13 Score=129.61 Aligned_cols=341 Identities=12% Similarity=0.051 Sum_probs=220.0
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCC----------
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA---------- 112 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~---------- 112 (400)
+.++.++..+...+.+++...|..++....+++++.+++.+..|.+...-.+|+|||.|+..++.+.++.
T Consensus 94 ~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~ 173 (608)
T TIGR03811 94 TLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEV 173 (608)
T ss_pred CCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence 3566777777777777666667677788999999999999999987667779999999999777664320
Q ss_pred ------------------------------------------C------CEEEEeCCCccchhHHHHhcCc---EEEEec
Q 015768 113 ------------------------------------------G------DSVVMFAPYYFNSYMSFQMTGV---THILVG 141 (400)
Q Consensus 113 ------------------------------------------g------d~vlv~~p~~~~~~~~~~~~g~---~~~~~~ 141 (400)
| -+++++.-.|+++..++..+|+ +++.+
T Consensus 174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V- 252 (608)
T TIGR03811 174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV- 252 (608)
T ss_pred cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe-
Confidence 0 0578888889999999999998 58888
Q ss_pred cCCCCCCCCCHHHHHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC--EEEEcccccccc---cC
Q 015768 142 PCSSKTLHPDADWLEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS--WLVVDNTYEYFM---YD 212 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~--~li~D~a~~~~~---~~ 212 (400)
|+++++ .+|++.|++.|. .+..+-+|+-+.++..+|.+-|.+++.+|++.++++|+ |+++|.||+++. +-
T Consensus 253 pvD~~~-rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~ 331 (608)
T TIGR03811 253 PVDSNY-RMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFL 331 (608)
T ss_pred ecCCCC-cCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhc
Confidence 888664 799999999886 22223455666778999999995555555555578898 699999999753 10
Q ss_pred C-C----Ccc---------------------------ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768 213 G-R----KHC---------------------------CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 213 ~-~----~~~---------------------------~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
. . +.. ..-...+-+.-.+||++. ....+|.++.++ +.+.+.+...
T Consensus 332 ~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd--~~~~~~~~~~ 408 (608)
T TIGR03811 332 DEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQD--IRMRDVISYF 408 (608)
T ss_pred cccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeC--HHHHHHHhcC
Confidence 1 0 000 000234556678999985 667899999887 4544443221
Q ss_pred hc-------c-------CCcCc-----cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC------CCc---
Q 015768 261 QD-------N-------IPICA-----SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG------EGA--- 312 (400)
Q Consensus 261 ~~-------~-------~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~--- 312 (400)
.. . ..... ..+..++....+-.+.+.+.++..+..++++++.+.|+..+ .+.
T Consensus 409 a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~ 488 (608)
T TIGR03811 409 ATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHP 488 (608)
T ss_pred cchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEe
Confidence 00 0 01111 13444455555533556788999999999999999998742 233
Q ss_pred ccCCCCceEEEeeCCCCCCC----HHHHHHHHHHhcC----------eEEeCCCcc---------------CCC------
Q 015768 313 VKGGEGAIYLWARLPEKHLD----DFEVVRWLAHRHG----------VVVIPGGAC---------------GCR------ 357 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~g----------i~v~~g~~~---------------~~~------ 357 (400)
+.+|+ .+.+++++.....+ ..++-+++.+... +.+...... +..
T Consensus 489 ~~~pd-lniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~ 567 (608)
T TIGR03811 489 LTKPD-FNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQR 567 (608)
T ss_pred cCCCC-cceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhcc
Confidence 34454 55566665322222 2233333332211 112111000 000
Q ss_pred ----CeEEEEecc---CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 358 ----GHLRISFGG---LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 358 ----~~iRi~~~~---~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
..+|-++.. .+.+-++..+..|++++.+..++
T Consensus 568 ~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (608)
T TIGR03811 568 AGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKLEK 606 (608)
T ss_pred CCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHHHh
Confidence 257777553 45588899999999998876653
No 371
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.64 E-value=2.1e-13 Score=128.40 Aligned_cols=299 Identities=16% Similarity=0.145 Sum_probs=187.8
Q ss_pred HHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--C--CCCC
Q 015768 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--T--LHPD 151 (400)
Q Consensus 76 ~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~ 151 (400)
+..++.++.+|. ....++++|+|.|+..++.+++++||.|+++.+||-+....+-..|+.++++.|.... | ..++
T Consensus 74 eAqe~aA~~fgA-d~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~ 152 (557)
T COG1982 74 EAQELAARVFGA-DHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIP 152 (557)
T ss_pred HHHHHHHHHhCC-CceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCCCC
Confidence 334444444464 2456778999999999999999999999999999999999999999999998443322 2 3678
Q ss_pred HHHHHHhhccCCCC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCC-CccccCCCcEEEEe
Q 015768 152 ADWLEKTLETKPTP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGR-KHCCVEGDHVVNLF 228 (400)
Q Consensus 152 ~e~l~~~l~~~~~~-~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~-~~~~~~~~~~i~~~ 228 (400)
.+.+++.+..++.. |++++++|+. .|.+.+ +++|.+.+++.++|+.+|+++..... .+. +......+.++++-
T Consensus 153 ~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~~tq 228 (557)
T COG1982 153 LETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADFVTQ 228 (557)
T ss_pred HHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceEEEe
Confidence 99999988766656 8899888765 799999 88999999999999999999873322 111 11223367889999
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC-CcCccHHHHHHHHH---HhcC-CcHHHHHHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI-PICASIISQHLALY---SLQT-GPEWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~---~l~~-~~~~~~~~~~~~~~~~~~l~~ 303 (400)
|.||.++ +.....++..+++..--.+++..+.... +.+++.+..+.+.. .... +....+...+..-..++.+++
T Consensus 229 S~HK~l~-alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~ 307 (557)
T COG1982 229 STHKLLA-ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRR 307 (557)
T ss_pred chhhhhh-hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999985 3333455555531011123444333222 33344333332222 1111 112222334555556666666
Q ss_pred HhccCCCCcccCCCC---------------------ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEE
Q 015768 304 ALSPLGEGAVKGGEG---------------------AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 362 (400)
Q Consensus 304 ~L~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi 362 (400)
..+..+++.+..+.. ..-+.+..|+.+..+..+..+|. ++||...-...+ ..-+-+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~-e~gii~e~~~d~--~~lll~ 384 (557)
T COG1982 308 LINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLR-EHGIIPEETGDY--SNLLLF 384 (557)
T ss_pred HHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHH-HcCCeeeecCCc--eeeEEe
Confidence 666666544433321 12234555666678888998885 778776543211 122333
Q ss_pred EeccCCHHHHHHHHHHHHHHHHHH
Q 015768 363 SFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+++ ..+....++.|.++.+.+
T Consensus 385 ~~~---~gk~~~lv~~L~~f~r~~ 405 (557)
T COG1982 385 SPG---IGKWQTLVDRLLEFKRRY 405 (557)
T ss_pred eec---cchHHHHHHHHHHHHHhh
Confidence 333 256666777777777743
No 372
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.58 E-value=9.5e-13 Score=116.33 Aligned_cols=262 Identities=18% Similarity=0.147 Sum_probs=150.1
Q ss_pred HHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEe---CChHHHHHHHHHHhcCCCCEEEE
Q 015768 46 KMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT---AGANQAFVNIVLTLCDAGDSVVM 118 (400)
Q Consensus 46 ~~v~~a~~~~~~~----~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~---~g~t~a~~~~~~~l~~~gd~vlv 118 (400)
..|++|+.+.--. ....+|+.. +.=|+.+.+-+++.++. ++-++- -++|+|+..++.++++|||+++.
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY~---D~GRd~le~iyA~vfga--E~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~ 101 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGYD---DIGRDKLERIYADVFGA--EDALVRPQFVSGTHAIALALFGVLRPGDELLS 101 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-TT----HHHHHHHHHHHHHCT---SEEEEETTS-SHHHHHHHHHHHH--TT-EEEE
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCCC---CccHHHHHHHHHHHhCc--hhhhhcccccchHHHHHHHHHhcCCCCCeEEE
Confidence 5677777654332 124455532 23455555555555564 333332 46889999999999999999884
Q ss_pred -eCCCccchhHHH----------HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHH
Q 015768 119 -FAPYYFNSYMSF----------QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLL 186 (400)
Q Consensus 119 -~~p~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l 186 (400)
+..-|....+.+ +..|+....+ |+.++| .+|.|.+++.+++++ |+|+|. +....+-..++.++|
T Consensus 102 ~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v-~L~~dg-~~D~~~i~~~~~~~t--k~v~IQRSrGYs~R~sl~i~~I 177 (403)
T PF06838_consen 102 ITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV-PLTEDG-TIDWEAIKKALKPNT--KMVLIQRSRGYSWRPSLTIEEI 177 (403)
T ss_dssp SSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE---B-TTS-SB-HHHHHHHHHTTE--EEEEEE-S-TTSSS----HHHH
T ss_pred cCCCchhhHHHHhCCCCCCCCChHHhCceeEEE-eecCCC-CcCHHHHHHhhccCc--eEEEEecCCCCCCCCCCCHHHH
Confidence 555576665554 5667888999 888877 689999999999766 999998 334444456898999
Q ss_pred HHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcc--eeEEEEccCCcHHHHHHHHHhhc
Q 015768 187 KRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW--RVGYIAYPSEVEGFATQLLKVQD 262 (400)
Q Consensus 187 ~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~--~~G~i~~~~~~~~~~~~l~~~~~ 262 (400)
+++.+.+++ .++++++|++|++|.-...| ...+.+++.+|+-|..| +|+ -.|||+++ ++++++......
T Consensus 178 ~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP---~~vGADl~aGSLIKNpG-GgiAptGGYIaGr---~~lVe~~a~RLT 250 (403)
T PF06838_consen 178 KEIIKFVKEINPDVIIFVDNCYGEFVETQEP---TEVGADLMAGSLIKNPG-GGIAPTGGYIAGR---KDLVERAAYRLT 250 (403)
T ss_dssp HHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G---GGGT-SEEEEETTSGGG-TTT-SS-EEEEES---HHHHHHHHHHHS
T ss_pred HHHHHHHHhhCCCeEEEEeCCcceeccccCc---cccchhheeccceeCCC-CCccCcCCEEech---HHHHHHHHhhhc
Confidence 999998875 48999999999998754433 34467799999999986 443 35999999 888887654322
Q ss_pred cCC----cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC---CcccCCCCceEEEeeCC
Q 015768 263 NIP----ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLP 327 (400)
Q Consensus 263 ~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~ 327 (400)
.-. .+++.-... ..++ +.=..+++..+..+-+......+++++. ..+..+.+-....+.+.
T Consensus 251 aPGiG~e~G~t~~~~R---~~~Q-GlFlAP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~ 318 (403)
T PF06838_consen 251 APGIGKEVGATLGTNR---LMFQ-GLFLAPHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELG 318 (403)
T ss_dssp -TTTGGGSS--TTTHH---HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-S
T ss_pred CCccccccccCcchHH---HHHh-HHhhchHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECC
Confidence 100 111100011 1111 1111256665666666666677777776 22233444566777776
No 373
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.57 E-value=4.5e-12 Score=113.86 Aligned_cols=344 Identities=15% Similarity=0.101 Sum_probs=219.7
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCC-hHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAG-ANQAFV 103 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g-~t~a~~ 103 (400)
=+..+++|++..+-+.+.-+..-+-...+.+ +..|.+. +|..++...+.+||.+.-|. |.|-+.+. +.++=.
T Consensus 64 vd~~m~PLGSCTMK~Np~~e~~~~~~p~f~~--iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~--DavsLQP~AGAqGE~ 139 (496)
T COG1003 64 VDRGMIPLGSCTMKLNPKAEMKPATWPEFAN--IHPFQPEEQVQGYLELIYELQEWLKEITGM--DAVSLQPNAGAQGEY 139 (496)
T ss_pred cccCccCCcccccccCchhhcccccccchhh--cCCCCChHHHHHHHHHHHHHHHHHHHhcCC--ceeeccCCCCcchhh
Confidence 3577888888776664333333222222222 5556554 66778888899999887775 45666533 333322
Q ss_pred ---HHHHHhc-CC----CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768 104 ---NIVLTLC-DA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (400)
Q Consensus 104 ---~~~~~l~-~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n 175 (400)
.+++... .. .+.+|+++..|..-.-.+...|++++.| +.+++| .+|+|+|++.+.++. .++.|++||.
T Consensus 140 aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V-~~~~~G-~VDlddLk~k~~~~~--AalMiTnPsT 215 (496)
T COG1003 140 AGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVV-KCDENG-NVDLDDLRAKAEDNL--AALMITNPST 215 (496)
T ss_pred HHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEE-ecCCCC-CccHHHHHHHhccce--eEEEeccCcc
Confidence 3333332 22 2579999999987777788899999999 898887 789999999998766 8999999876
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcH
Q 015768 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVE 251 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~ 251 (400)
.|.. .+.+.+|+++.+++|..+..|.+-..-..+.. ...+.+.+++=..++|.|+. +|...|=|..+ .
T Consensus 216 -~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~--rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk---~ 287 (496)
T COG1003 216 -LGVF--EEDIREICEIVHEAGGQVYYDGANLNAIVGLA--RPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVK---A 287 (496)
T ss_pred -cccc--hhhHHHHHHHHHHcCCEEEecCcchhhhhccc--cccccccceEEeecccccccCCCCCCCCCCceehH---h
Confidence 3443 45699999999999999999999765444332 22334566777789999932 35556667666 3
Q ss_pred HHHHHHHHh----h----------------ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 252 GFATQLLKV----Q----------------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 252 ~~~~~l~~~----~----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
.+...+..- . ....++.......+..-.+.-+.+.+++..+...-+++++...|++.-.+
T Consensus 288 ~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~ 367 (496)
T COG1003 288 HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPV 367 (496)
T ss_pred hccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCcc
Confidence 333322210 0 00112222222222222222245667788888888999999999974222
Q ss_pred cccCCC-CceEEEeeCC----CCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 312 AVKGGE-GAIYLWARLP----EKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 312 ~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
.+.+.. ...=++++.. ..+.+..+++.+|+ ++|+.--. .+|- -.+.+-|-+.- .+.+++|+.++++.+..
T Consensus 368 ~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLl-D~GfHaPT-~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~ 445 (496)
T COG1003 368 PYTGENRVAHECILDARPLKKETGVRALDVAKRLL-DYGFHAPT-MYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIR 445 (496)
T ss_pred ccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHH-hcCCCCCc-ccCccccccceeecCCCCCCHHHHHHHHHHHHHHH
Confidence 222221 1222333333 23457889999998 89988633 3332 46777777665 68889999999988888
Q ss_pred HHHhcc
Q 015768 384 EELVKD 389 (400)
Q Consensus 384 ~~~~~~ 389 (400)
++..+.
T Consensus 446 ~Ea~~~ 451 (496)
T COG1003 446 EEADAV 451 (496)
T ss_pred HHHHhc
Confidence 776543
No 374
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=1.3e-11 Score=108.38 Aligned_cols=361 Identities=16% Similarity=0.104 Sum_probs=226.2
Q ss_pred hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHHh----hcC
Q 015768 13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQ----ENK 86 (400)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~~~~~~a~~l~~----~~~ 86 (400)
..+...+.=+.+..+++..-|.|-..++.. +..|++++-..+.+...-+|+.. .|=.++.+.+....++ .++
T Consensus 23 ~~DPev~~ii~~Ek~RQ~~gieLIaSENFt--s~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ 100 (477)
T KOG2467|consen 23 EVDPEVHDIIEKEKERQKRGIELIASENFT--SRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG 100 (477)
T ss_pred hcChHHHHHHHHHHHhhhcceeEeecccch--HHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhC
Confidence 344444555555677777778887766553 58899999988877444444321 2233455555444433 357
Q ss_pred CCCC--cEEEe-CChHHHHHHHHHHhcCCCCEEEE---eCCCccc--hhHHHHhcCc-----EEEEeccCCCCCCCCCHH
Q 015768 87 LYKS--SVMVT-AGANQAFVNIVLTLCDAGDSVVM---FAPYYFN--SYMSFQMTGV-----THILVGPCSSKTLHPDAD 153 (400)
Q Consensus 87 ~~~~--~i~~~-~g~t~a~~~~~~~l~~~gd~vlv---~~p~~~~--~~~~~~~~g~-----~~~~~~~~~~~~~~~~~e 153 (400)
++++ -|-+. -+++-|+..+..++++|+|+|.- ++.+|-+ +..--+...+ +-.++ .+++...-+|-|
T Consensus 101 ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPY-kv~~~TG~IDYD 179 (477)
T KOG2467|consen 101 LDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPY-KVDPSTGYIDYD 179 (477)
T ss_pred CCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCce-eeCCCCCceehH
Confidence 7653 23222 34569999999999999999974 3444422 2211122222 11223 356565678999
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA 233 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 233 (400)
.|++....-. ||+|+.- ....-+.++ -.++.++|.+-|.+++.|.+|...............-.+|++.+.+|+
T Consensus 180 ~Le~~A~~fr-Pk~iiaG--~SaY~R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKs 253 (477)
T KOG2467|consen 180 KLEKTATLFR-PKLIIAG--TSAYSRLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKS 253 (477)
T ss_pred HHHHHHHhcC-CcEEEec--cccchhhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccccc
Confidence 9998655322 5877633 233446778 555555666889999999999755544333333334467899999998
Q ss_pred cCCCcceeEEEEccCCcH------------HHHHHHHHhh-ccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHH
Q 015768 234 YGMMGWRVGYIAYPSEVE------------GFATQLLKVQ-DNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNRE 299 (400)
Q Consensus 234 ~g~~g~~~G~i~~~~~~~------------~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~ 299 (400)
+ .|.|.|.|..+...+ ++-++++..- .....++....+.+++.+|.+ ....++.+.++..+|+.
T Consensus 254 L--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nak 331 (477)
T KOG2467|consen 254 L--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAK 331 (477)
T ss_pred c--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 7 688999988775211 1222222211 112233444555555566664 33567899999999999
Q ss_pred HHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEecc-----CCH
Q 015768 300 IIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG-----LVE 369 (400)
Q Consensus 300 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~-----~~~ 369 (400)
.|.+.|.+.+.--+.+......+.+++.....++..+ +..++.-+|.+.--..++ .|+.+|++... .-+
T Consensus 332 ala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarv-E~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e 410 (477)
T KOG2467|consen 332 ALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARV-EKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGE 410 (477)
T ss_pred HHHHHHHHcCceEecCCccceEEEEeccccCCchHHH-HHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccH
Confidence 9999999998855666666777778888777676544 345556677775444443 48899998543 356
Q ss_pred HHHHHHHHHHHHHHHH
Q 015768 370 DDCKAAADRLRRGLEE 385 (400)
Q Consensus 370 ~~~~~~~~~l~~~l~~ 385 (400)
+|+++..+-|.++++-
T Consensus 411 ~df~~v~~fi~~av~i 426 (477)
T KOG2467|consen 411 EDFEKVADFIDRAVKI 426 (477)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888887777753
No 375
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.49 E-value=5.6e-11 Score=119.92 Aligned_cols=328 Identities=12% Similarity=0.086 Sum_probs=204.0
Q ss_pred HHHHHHHhcCCCeEEc-CCCCCCCCCcHHHHHHHHHhhc-CCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEe
Q 015768 20 VQIQELVRGAKNAVSL-AQGVVYWQPPKMAMEKVKELVW-DPSISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVT 95 (400)
Q Consensus 20 ~~~~~~~~~~~~~i~~-~~~~~~~~~~~~v~~a~~~~~~-~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~ 95 (400)
..+.++-+....+..| +.|.-+.-.|+.+.+.+.+.-. -....+|.+ ++|.-+..=.+...+.++.|++..+.-+.
T Consensus 53 ~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~ 132 (939)
T TIGR00461 53 AHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLL 132 (939)
T ss_pred HHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhcc
Confidence 4444444444444344 3444333456666656654322 112445543 24444444445555666679988888899
Q ss_pred CChHHHHHHHHHHhc---CCCCEEEEeCCCccchhHHHH----hcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768 96 AGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v 168 (400)
.++|++-+.++.+.. +++++|+|++..|+.....++ ..|++++.+ ++++|+..+ ++ .++
T Consensus 133 d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~~--~~v 198 (939)
T TIGR00461 133 DEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--DV--FGC 198 (939)
T ss_pred chhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--CE--EEE
Confidence 999999998887753 234899999999988886665 678888877 344555544 23 677
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEE
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYI 244 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i 244 (400)
++++|++ .|.+.+ +++|.++++++|.+++++.-...+.. ...+.+.+.||++++ +|.||. +|.-.|++
T Consensus 199 ~~q~Pn~-~G~ied---~~~i~~~~h~~gal~~~~ad~~al~l---l~~Pge~GaDi~vg~-~q~fg~p~g~GGP~aG~~ 270 (939)
T TIGR00461 199 LLQYPAT-DGSILD---YKQLIDALHSHKSLVSVAADLMALTL---LTPPGHYGADIVLGS-SQRFGVPMGYGGPHAAFF 270 (939)
T ss_pred EEECCCC-CeEEec---HHHHHHHHHHcCCEEEEEechHHhCC---cCCHHHcCCcEEeeC-CCccCCCCCCCCCceeee
Confidence 7888865 788877 99999999999999999543332211 122234466777654 444433 35558888
Q ss_pred EccCCcHHHHHHHHHh-------------------------hc---cCCcC-ccHHHHHHHHHHhc-CCcHHHHHHHHHH
Q 015768 245 AYPSEVEGFATQLLKV-------------------------QD---NIPIC-ASIISQHLALYSLQ-TGPEWVTERVKDL 294 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~~-------------------------~~---~~~~~-~~~~~~~~~~~~l~-~~~~~~~~~~~~~ 294 (400)
.++ +++...+... ++ ..+.+ .+.+...++..++. .+.+.+++..++.
T Consensus 271 a~~---~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~ 347 (939)
T TIGR00461 271 AVK---DEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRI 347 (939)
T ss_pred eec---HhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 888 4554443210 00 00111 11222222222223 3556678888889
Q ss_pred HHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHH
Q 015768 295 VRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK 373 (400)
Q Consensus 295 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~ 373 (400)
..++.++.+.|++.+. ++..+.-..-+.++++. .+.+++.+.++ ++||.++.. ..+.+++|+.- +|++|++
T Consensus 348 ~~~a~~l~~~L~~~G~-~~~~~~fF~~~~v~~~~--~~~~~i~~~~~-~~gi~l~~~----~~~~i~~s~~E~~t~~di~ 419 (939)
T TIGR00461 348 HSLTSILANGLENDPH-ELINKTWFDTLTVKVGN--GISSELLKAAE-EFNINLRAV----DTTTVGIALDETTTKADVE 419 (939)
T ss_pred HHHHHHHHHHHHhCCC-cccCCCccceEEEEeCC--CCHHHHHHHHH-HCCCeeeec----CCCEEEEEeecCCCHHHHH
Confidence 9999999999999664 54443212224445532 24678888776 789998762 34689999988 8999999
Q ss_pred HHHHHHH
Q 015768 374 AAADRLR 380 (400)
Q Consensus 374 ~~~~~l~ 380 (400)
.+++.+.
T Consensus 420 ~l~~~~~ 426 (939)
T TIGR00461 420 NLLKVFD 426 (939)
T ss_pred HHHHHhc
Confidence 9999885
No 376
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.45 E-value=1.1e-10 Score=105.96 Aligned_cols=304 Identities=15% Similarity=0.139 Sum_probs=205.4
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcE-EEeCChHHHHHHHHHHhc----C-CC---CEEEEeCCCccchhHHHHhcCcEEE
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSV-MVTAGANQAFVNIVLTLC----D-AG---DSVVMFAPYYFNSYMSFQMTGVTHI 138 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i-~~~~g~t~a~~~~~~~l~----~-~g---d~vlv~~p~~~~~~~~~~~~g~~~~ 138 (400)
++...+..+..+.+...++.+++.+ ..|.|+|+++..+-.... . .| ..++.+...|.++....+..++++.
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~ 195 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELR 195 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEE
Confidence 5667888899999988887665432 446788888555544431 1 12 3688888888888888999999999
Q ss_pred EeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEcccccccccC-CCC-
Q 015768 139 LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTYEYFMYD-GRK- 215 (400)
Q Consensus 139 ~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~-~~~~li~D~a~~~~~~~-~~~- 215 (400)
.+ |+++..+.+|+..+.+.+++++ ..++...|+.|+|..-+ +++|.++..+ +++.+++|.+-+.|... +..
T Consensus 196 ~V-~~~~~~~~~D~~k~~~~i~eNt--i~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~ 269 (491)
T KOG1383|consen 196 EV-PLDEGDYRVDPGKVVRMIDENT--IMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGFINPAGYLN 269 (491)
T ss_pred ee-eccccceEecHHHHHHHhccce--EEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCccccccccccC
Confidence 99 9998889999999999999887 88888899999999888 8888888778 99999999999988763 111
Q ss_pred c-cccC-CCcEE-EEeccccccCCCcceeEEEEccCCcHHH-HHHH-------HHhhccCCcC-----ccHHHHHHHHHH
Q 015768 216 H-CCVE-GDHVV-NLFSFSKAYGMMGWRVGYIAYPSEVEGF-ATQL-------LKVQDNIPIC-----ASIISQHLALYS 279 (400)
Q Consensus 216 ~-~~~~-~~~~i-~~~s~sK~~g~~g~~~G~i~~~~~~~~~-~~~l-------~~~~~~~~~~-----~~~~~~~~~~~~ 279 (400)
. ..+. ...+. ...+.|| +|+..-..||++-++ +++ ..++ .......+.+ ....++++. .
T Consensus 270 ~~~fdFr~p~V~Sisa~~HK-YGl~~~G~~~vl~r~--k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~--~ 344 (491)
T KOG1383|consen 270 EEEFDFRVPGVTSISADGHK-YGLAPAGSSWVLYRN--KELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAA--L 344 (491)
T ss_pred ccccccCCCCceeEeeccce-eeeeecCcEEEEEcc--cccccceEEEeccccCccccCcccccCCcccHHHHHHHH--H
Confidence 1 1111 12222 2234466 455545579988876 222 1221 1111112222 233444443 3
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCe
Q 015768 280 LQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGH 359 (400)
Q Consensus 280 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 359 (400)
+..+++...+..+++.+....+++.+++++.+.+++. ..+.++-+.....+..++.+.| ++.|..+..-. .|..
T Consensus 345 ~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk--p~vs~~~~~s~~~~i~elsd~l-~~~GW~lnalq---~P~a 418 (491)
T KOG1383|consen 345 MSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK--PLVSFILFGSNDVNIFELSDLL-RKKGWILNALQ---FPAA 418 (491)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--CcEEEEEccCCccchhhhhHHH-HhcCcCccccC---CCCc
Confidence 4445677788899999999999999999888777765 2333333444334566777755 58898885433 2334
Q ss_pred EEEEecc--CCHHHHHHHHHHHHHHHHHHhc
Q 015768 360 LRISFGG--LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 360 iRi~~~~--~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+-+++.. ..++-.++++..+.++++++..
T Consensus 419 ~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 419 IHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred eEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 4555443 3444467888888888888764
No 377
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.42 E-value=2.5e-11 Score=103.87 Aligned_cols=330 Identities=15% Similarity=0.127 Sum_probs=199.8
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEeC
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAGDSVVMFA 120 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~---~~gd~vlv~~ 120 (400)
-+|+|+++..+.+..-..+...- .+++.+-..+..+..-+ -+-++|++++++|+..+++... +..| |++.+
T Consensus 62 chp~VV~A~~kQmat~~tN~RFl---hd~lv~cA~~l~stlPe--Lsvc~F~NSGSEANDLALRLAR~ftkhqD-vItld 135 (452)
T KOG1403|consen 62 CHPEVVRAGAKQMATISTNNRFL---HDELVQCARTLTSTLPE--LSVCFFVNSGSEANDLALRLARNFTKHQD-VITLD 135 (452)
T ss_pred CCHHHHHHHHHHHhHhcccchhh---HHHHHHHHHHHhhcCCC--ceEEEEecCCchhhHHHHHHHHhhcccCc-eEEEe
Confidence 57999999888776422111101 22333333333322212 3567899999999999998864 3434 55556
Q ss_pred CCccchhHHH-Hh------cC--c---EEEEeccCCC--CC-----C-------CCCHHHHHHhhc----cCCCCeEEEE
Q 015768 121 PYYFNSYMSF-QM------TG--V---THILVGPCSS--KT-----L-------HPDADWLEKTLE----TKPTPKLVSV 170 (400)
Q Consensus 121 p~~~~~~~~~-~~------~g--~---~~~~~~~~~~--~~-----~-------~~~~e~l~~~l~----~~~~~~~v~l 170 (400)
..|+++.... +. .| . +.+.+-|.++ .| . ..-.+.+++.+. ....+.+.+-
T Consensus 136 HAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiA 215 (452)
T KOG1403|consen 136 HAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIA 215 (452)
T ss_pred chhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHH
Confidence 6776765432 11 01 1 2222213221 00 0 112345555544 3332344444
Q ss_pred eCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC-CCcEEEEeccccccCCCcceeEEEEccC
Q 015768 171 VNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 171 ~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
..-+...|.++ |.+..+++++..+.+|-..|.||++-+|..-|..++... .+...-+-++.|.+| .|-+++.++..
T Consensus 216 EslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG-NGhPVa~Vatt- 293 (452)
T KOG1403|consen 216 ESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG-NGHPVAAVATT- 293 (452)
T ss_pred HHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC-CCCeeeEEecc-
Confidence 45677788765 566899999999999999999999998887666655543 333233446779998 99999999999
Q ss_pred CcHHHHHHHHH--hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-Ccc---cCCCCceEE
Q 015768 249 EVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAV---KGGEGAIYL 322 (400)
Q Consensus 249 ~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~---~~~~~~~~~ 322 (400)
+++.+.+.. .....+++.|+.+..+..+.+...++ +.......+..+.|...|+.+.. ..+ ++.. |.|+
T Consensus 294 --keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~--E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGv-GLFi 368 (452)
T KOG1403|consen 294 --KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCED--ENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGV-GLFI 368 (452)
T ss_pred --HHHHHHhccccceehhccCCCchhHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHhhhccceeccccc-eEEE
Confidence 899888865 33456888999999988888875321 33344445555555555554321 122 2222 6777
Q ss_pred EeeCCCCC-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 323 WARLPEKH-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 323 ~~~~~~~~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
-+++-... ..+.-+..+|.+.++|++..-.+ ..+-+.|-+.. .++++.++.+..|.+.+.-+.+
T Consensus 369 GIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~ld~iLT~mee 440 (452)
T KOG1403|consen 369 GIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGLDEILTVMEE 440 (452)
T ss_pred eeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHHHHHHHHHHH
Confidence 66653221 12334555677778899864321 35667776443 6788899999998888885544
No 378
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.40 E-value=1.3e-10 Score=105.39 Aligned_cols=319 Identities=13% Similarity=0.087 Sum_probs=202.1
Q ss_pred CCCCCCcHHHHHHHHHHHHhhcCCCC---------CcEEEeCChHHHHHHHHHHhc-------CCC------------CE
Q 015768 64 YGADEGLPELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLC-------DAG------------DS 115 (400)
Q Consensus 64 y~~~~g~~~~~~~~a~~l~~~~~~~~---------~~i~~~~g~t~a~~~~~~~l~-------~~g------------d~ 115 (400)
+-..+..++++..+.+|+.+..++|. .--++..+++++...++.+.. +.+ -.
T Consensus 105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV 184 (511)
T KOG0628|consen 105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLV 184 (511)
T ss_pred eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhhe
Confidence 33556788999999999999877642 223455566677777766642 111 13
Q ss_pred EEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE--EEeCCCCCCccCCCHHHHHHHHHHH
Q 015768 116 VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV--SVVNPGNPSGTYIPERLLKRISDLC 193 (400)
Q Consensus 116 vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v--~l~~p~nptG~~~~~~~l~~i~~l~ 193 (400)
+..++-+|.++..+....|++...+ +.+. ++.++.+.|.+++.++.....| +++ .+--|-....-+++.+|..+|
T Consensus 185 ~Y~SDqahssveka~~i~~VklR~l-~td~-n~~mr~~~L~~AIe~D~arGlIPf~v~-at~GTT~~ca~D~l~elg~Vc 261 (511)
T KOG0628|consen 185 AYCSDQAHSSVEKACLIAGVKLRAL-PTDE-NFGMRGDTLRKAIEEDIARGLIPFFVC-ATLGTTSSCAFDELEELGPVC 261 (511)
T ss_pred EEecCcccchHHHhHhhcceeEEEe-eccc-CcCCCHHHHHHHHHHHHhCCCccEEEE-EeecCccccccccHHHhcchh
Confidence 5677888888888888889998888 8776 7889999999999843211221 222 122222334556799999999
Q ss_pred HHcCCEEEEcccccccccCCCCccccCC---CcEEEEeccccccCCCcceeEEEEccCCc---------HHHHHH--HHH
Q 015768 194 KAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVNLFSFSKAYGMMGWRVGYIAYPSEV---------EGFATQ--LLK 259 (400)
Q Consensus 194 ~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~g~~g~~~G~i~~~~~~---------~~~~~~--l~~ 259 (400)
+++|+|+++|.+|++..+.-+.+..... ..+-+-...||++ +--+.+..+-.++.+ +...+. ...
T Consensus 262 ~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~ 340 (511)
T KOG0628|consen 262 REEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS 340 (511)
T ss_pred hhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhhee-EEeeeeecceeecCceeeeeeecChHhhcchhhcc
Confidence 9999999999999965554332222111 1123344557766 233333333222210 111111 111
Q ss_pred hhccCCcC------ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768 260 VQDNIPIC------ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333 (400)
Q Consensus 260 ~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (400)
......+. --.+-.+.....+ +.+.++++++++.++++.+.+.+.+-+-+++..+..--.+++++.......
T Consensus 341 ~~Dyrhwqipl~rRfRSLKlWfv~R~~--Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~n 418 (511)
T KOG0628|consen 341 APDYRHWQIPLGRRFRSLKLWFVLRSY--GVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEIN 418 (511)
T ss_pred CCCccccccccccchhhHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHHH
Confidence 11111111 1122233333333 346678888888888888888888776667776665566777887655557
Q ss_pred HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 334 FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+++..++-....|.+.|.. .++.-.||++++. ++.+|++++.+.|.+....+.++
T Consensus 419 e~Ll~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 419 EALLNRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred HHHHHHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 7888888777788888755 2345579999887 78899999999999999886654
No 379
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.38 E-value=2.8e-10 Score=103.01 Aligned_cols=221 Identities=14% Similarity=0.090 Sum_probs=158.3
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEE-----
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVV----- 117 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~~gd~vl----- 117 (400)
.++++++++.+.+.+.....|.-..+. ..+.+...-....+++ .+.++++++.+.|+..++.++..++..|+
T Consensus 39 ~~~e~iea~~~~~~~~v~Le~~l~~g~--~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~l 116 (395)
T COG1921 39 YSPEAIEAMKEAMRAPVELETDLKTGK--RGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGEL 116 (395)
T ss_pred CCHHHHHHHHHHhcccceeeeecccch--hhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccc
Confidence 579999999999887654444333322 2222222211222444 68899999999999999999988656553
Q ss_pred EeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHHHHHH
Q 015768 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT--YIPERLLKRISDLCKA 195 (400)
Q Consensus 118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~--~~~~~~l~~i~~l~~~ 195 (400)
+. ++++++.++++..|++.+.+ -... ..+..+++.++.+++ ++++=++-+|- |. ..+ ++++++++++
T Consensus 117 V~-gg~~~v~d~~~~aG~~l~Ev-G~tn---~t~~~d~~~AIne~t--a~llkV~s~~~-~f~~~l~---~~~l~~ia~~ 185 (395)
T COG1921 117 VE-GGAFRVPDIIRLAGAKLVEV-GTTN---RTHLKDYELAINENT--ALLLKVHSSNY-GFTGMLS---EEELVEIAHE 185 (395)
T ss_pred cc-CCCCChhHHHHHcCCEEEEe-cccC---cCCHHHHHHHhccCC--eeEEEEeeccc-ccccccc---HHHHHHHHHH
Confidence 44 68889999999999999988 3221 347889999999887 66655544442 33 345 7888999999
Q ss_pred cCCEEEEcccccccccCCC-CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHH
Q 015768 196 AGSWLVVDNTYEYFMYDGR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQH 274 (400)
Q Consensus 196 ~~~~li~D~a~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 274 (400)
+|+++++|.+.+......+ .......+.+++++|..|.+| |.+.|.|+++ ++++++++...-............
T Consensus 186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~Gk---KelI~~lq~~~l~Ralrv~K~tla 260 (395)
T COG1921 186 KGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGK---KELIEKLQSHPLKRALRVDKETLA 260 (395)
T ss_pred cCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcC--CCccceEech---HHHHHHHHhhhhhhhhhcCcHhHH
Confidence 9999999999876533111 112234577899999999996 7789999999 899999987766667777777777
Q ss_pred HHHHHhcC
Q 015768 275 LALYSLQT 282 (400)
Q Consensus 275 ~~~~~l~~ 282 (400)
++.++|+.
T Consensus 261 ~l~~aLe~ 268 (395)
T COG1921 261 ALEAALEL 268 (395)
T ss_pred HHHHHHHH
Confidence 77777764
No 380
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.37 E-value=1.5e-10 Score=107.27 Aligned_cols=289 Identities=17% Similarity=0.179 Sum_probs=159.5
Q ss_pred CCCCCC--CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc---CCCCEEEEeCCCccchhHHHHh---
Q 015768 61 ISKYGA--DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQM--- 132 (400)
Q Consensus 61 ~~~y~~--~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~--- 132 (400)
..+|.+ ++|.-+..-++...+.++.|++.-+.-+..++|.+-+.++.+.. +.+++|+++...|+.+...++.
T Consensus 97 YtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~ 176 (429)
T PF02347_consen 97 YTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAA 176 (429)
T ss_dssp -STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCC
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhh
Confidence 345544 34444444455555677778876556677888888887776653 3346999999999998876644
Q ss_pred -cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 015768 133 -TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY 211 (400)
Q Consensus 133 -~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~ 211 (400)
.|++++.+ +.++.+. .| .++ ..+|++++|++ .|.+-+ +++|.++++++|.++++ .+.- ...
T Consensus 177 ~~g~~iv~~-~~~~~~~-~d--------~~~--~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL 238 (429)
T PF02347_consen 177 PLGIEIVEV-PLDEDGT-TD--------DDD--TAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NAL 238 (429)
T ss_dssp HCCEEEEEE--BBTTCS-B---------STT--EEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGC
T ss_pred hCCeEEEEe-cccccCC-cc--------ccC--eEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHH
Confidence 68899988 7776653 23 233 58999999975 788888 99999999999999987 3322 222
Q ss_pred CCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHHHHHHHHH----------------------------
Q 015768 212 DGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEGFATQLLK---------------------------- 259 (400)
Q Consensus 212 ~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~~~~~l~~---------------------------- 259 (400)
+. ...+...+.||++++ +|.||. +|...|++.++ +++...+..
T Consensus 239 ~~-l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~---~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrR 313 (429)
T PF02347_consen 239 GG-LKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVR---EDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRR 313 (429)
T ss_dssp CT-C--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE----GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHG
T ss_pred hC-cCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEh---hhhhhhCCCceecccccccccceeeeccccccccccc
Confidence 22 122234466787766 787753 45668999888 444444321
Q ss_pred hhccCCcCcc-HHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768 260 VQDNIPICAS-IISQHLALYSLQ-TGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVV 337 (400)
Q Consensus 260 ~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (400)
.+...+.+.+ .+...++..++. .|.+.+++..++...++.++++.|++.....+..+.-..++....+. ....++.
T Consensus 314 eKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~--~~~~~l~ 391 (429)
T PF02347_consen 314 EKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKD--KEVEELL 391 (429)
T ss_dssp CCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS---HHHHHHH
T ss_pred cchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCc--HHHHHHH
Confidence 1111122222 232223333333 35677899999999999999999999743333333222334434332 1222344
Q ss_pred HHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
++.. ..|+... +...+.+-+|+.- .+.+|++.+++.|
T Consensus 392 ~~~~-~~gl~~~----~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 392 KRGI-EGGLNLR----YPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HTT-----EEEG----GG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHH-hcCCCcc----ccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 3333 4453332 2234588888887 7889988888754
No 381
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.32 E-value=6.9e-10 Score=95.17 Aligned_cols=265 Identities=14% Similarity=0.107 Sum_probs=160.5
Q ss_pred HHHHHHHHHhhcC----CCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCC--cEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768 46 KMAMEKVKELVWD----PSISKYG-ADEGLPELRDALVKKLNQENKLYKS--SVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (400)
Q Consensus 46 ~~v~~a~~~~~~~----~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~--~i~~~~g~t~a~~~~~~~l~~~gd~vlv 118 (400)
..|+++.++.--. ....+|+ +..|.+.+.+..|+-+ |.+.. +..+.+ +|+|+..++..+++|||+.+.
T Consensus 38 ~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf----~aE~a~VRpq~is-GTHAI~~aLfg~LRpgDell~ 112 (416)
T COG4100 38 KKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVF----GAEAALVRPQIIS-GTHAIACALFGILRPGDELLY 112 (416)
T ss_pred HHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHh----ccccceeeeeeec-chhHHHHHHHhccCCCCeEEE
Confidence 4566665443221 1134455 3466666666666665 54322 234445 559999999999999999875
Q ss_pred eCC-CccchhHH----------HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC-CCCCCccCCCHHHH
Q 015768 119 FAP-YYFNSYMS----------FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPERLL 186 (400)
Q Consensus 119 ~~p-~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~-p~nptG~~~~~~~l 186 (400)
... -|....++ ++..|+...-+ |+..+| .+|.+.++..+++++ |+|.|.. .....--.++..++
T Consensus 113 i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v-~Lt~~g-kiD~~~v~~~i~~~t--kli~IQRS~GY~~RpS~~I~eI 188 (416)
T COG4100 113 ITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAV-PLTADG-KIDIQAVKTAISDRT--KLIGIQRSKGYAWRPSLSIAEI 188 (416)
T ss_pred ecCCcchhHHHHhccCCCCcccHHHhCcceeec-ccccCC-cccHHHHHHhcCccc--eEEEEEeccCcCCCCcccHHHH
Confidence 533 35444443 35567777888 888777 789999999999887 9998873 22222224788889
Q ss_pred HHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcc--eeEEEEccCCcHHHHHHHHHhhc
Q 015768 187 KRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW--RVGYIAYPSEVEGFATQLLKVQD 262 (400)
Q Consensus 187 ~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~--~~G~i~~~~~~~~~~~~l~~~~~ 262 (400)
+++.++.++ .|+++++|.+|++|.-...+. .-+.++..+|+-|.-| +|+ -.||+.++ +++++...-...
T Consensus 189 ~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt---~vGaDliAGSLIKNpG-GgiaktGGYiaGk---~~~ve~~~yRlT 261 (416)
T COG4100 189 EEMITFVKEINPNVIVFVDNCYGEFVEEKEPT---HVGADLIAGSLIKNPG-GGIAKTGGYIAGK---AELVEAAAYRLT 261 (416)
T ss_pred HHHHHHHHhcCCCEEEEEeccchhhhhccCcc---ccchhhhccceeeCCC-Cceeeccceeech---HHHHHhhceeee
Confidence 999998886 489999999999987654433 3356788999999886 443 35899999 677765432111
Q ss_pred c-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC---CcccCCCCceEEEeeCC
Q 015768 263 N-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLP 327 (400)
Q Consensus 263 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~ 327 (400)
. .-..-............+- .=..+++..+..+-+-.....|++++. .++..+.......+++.
T Consensus 262 aPGIG~e~Gat~~~l~~myqG-lFlAPhvv~qa~Kga~fta~~le~lg~~~~P~~~~kRtDlIQavkf~ 329 (416)
T COG4100 262 APGIGREGGATLYSLREMYQG-LFLAPHVVSQAVKGAHFTARFLEKLGFPVNPKYDAKRTDLIQAVKFG 329 (416)
T ss_pred cCCccccccccHHHHHHHHhh-hccchHHHHHHhhhhHHHHHHHHHcCCCCCCcccccccchhhheecC
Confidence 0 0001111222222223221 111245555555444444555555554 23333443455556665
No 382
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.24 E-value=2.2e-09 Score=96.44 Aligned_cols=310 Identities=15% Similarity=0.159 Sum_probs=192.2
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhc--------CCC-----C-EEEEeCCCccc
Q 015768 61 ISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLC--------DAG-----D-SVVMFAPYYFN 125 (400)
Q Consensus 61 ~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~--------~~g-----d-~vlv~~p~~~~ 125 (400)
...|...+..--+.+.+-..+.+..|.+.. +=++++|++-++..++.+.. ..| + .+..++-+|++
T Consensus 130 ~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS 209 (510)
T KOG0629|consen 130 MFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS 209 (510)
T ss_pred CceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh
Confidence 444544555555566666666666687764 77889998888887777653 111 2 34566788999
Q ss_pred hhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768 126 SYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (400)
Q Consensus 126 ~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (400)
+..++..+|+ +++.| +.++.| .+.+++||+.|... ..|-.|-.+..+...|..-| |..|+++|++|++
T Consensus 210 i~kaAa~lg~gtd~c~~v-~t~e~G-km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~~l 284 (510)
T KOG0629|consen 210 IKKAAAFLGLGTDHCIKV-KTDERG-KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKHKL 284 (510)
T ss_pred HHHHHHHhccCCceeEEe-cccccC-ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhcCE
Confidence 9999999884 78888 888887 78999999988622 11344444445667788888 9999999999999
Q ss_pred EEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc----------cC
Q 015768 199 WLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD----------NI 264 (400)
Q Consensus 199 ~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~----------~~ 264 (400)
|+++|.+.++...-...+ .... ...-+.-+.+|.+| .++.++.++.+. +.+.++-..... -.
T Consensus 285 WmHvDAAwGGglLmS~k~R~kl~Gie-ra~SvtwnpHK~~g-aplqCsa~l~r~--~gll~~Cn~~~A~YLFq~dK~Ydv 360 (510)
T KOG0629|consen 285 WMHVDAAWGGGLLMSRKHRHKLTGIE-RANSVTWNPHKLMG-APLQCSAFLTRE--EGLLQRCNQMSAIYLFQQDKFYDV 360 (510)
T ss_pred EEEeecccccccccChhhHhhccCcc-ccCceeecHHHhhc-CcchhhHHHHHH--HHHHHhhcccchhhhhccCceeec
Confidence 999999998643221111 1111 12233447899998 778888887774 333333322110 00
Q ss_pred -----------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccC--CCCceEEEeeCCCCC
Q 015768 265 -----------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKG--GEGAIYLWARLPEKH 330 (400)
Q Consensus 265 -----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~--~~~~~~~~~~~~~~~ 330 (400)
.-....+-++.. +-..+...+++..++..++++++.+.|++.++.. +.. |+..++.+..+|+..
T Consensus 361 S~DTgdK~iQCGRh~D~FKlWlm--wkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~l 438 (510)
T KOG0629|consen 361 SYDTGDKAIQCGRHVDVFKLWLM--WKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSL 438 (510)
T ss_pred ccccccchhhcCccccHHHHHHH--HHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHh
Confidence 001233333332 2234556678999999999999999999977622 332 332333333333211
Q ss_pred ---CC-----------HHHHHHHHHHhcCeEEeCCCccC-CCCeEEEEecc--CCHHHHHHHHHHHHHH
Q 015768 331 ---LD-----------DFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG--LVEDDCKAAADRLRRG 382 (400)
Q Consensus 331 ---~~-----------~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRi~~~~--~~~~~~~~~~~~l~~~ 382 (400)
.+ .-.+-.+++ +.|-.-..-.+.+ .++++|..++. .+..|++.+++-|...
T Consensus 439 R~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 439 RGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred ccCcccchhhhHHHhhCcHHHHHHH-hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 01 112344555 4554433222222 46789998776 5788888888777654
No 383
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.22 E-value=2.5e-11 Score=108.75 Aligned_cols=223 Identities=17% Similarity=0.153 Sum_probs=58.7
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHH-HHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELR-DALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~-~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p 121 (400)
+.++++++++.+....+....|.-..|...-| ..+.+.+.+..| .++.+++++...|+..++.++.. |.+|++...
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~ltg--AeaA~VvNnnaAAv~L~l~~la~-~~EvIvsRG 93 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELTG--AEAALVVNNNAAAVLLALNTLAK-GKEVIVSRG 93 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccc-ccccccccc
Confidence 46788999988887765555554333332222 223333333334 46677888888999999988874 556665543
Q ss_pred Cc------cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC--cc--CCCHHHHHHHHH
Q 015768 122 YY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS--GT--YIPERLLKRISD 191 (400)
Q Consensus 122 ~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt--G~--~~~~~~l~~i~~ 191 (400)
.- +.+.++++..|++.++| -... ...++++++++++++ .+++-.+++|-. |. -.+ ++++++
T Consensus 94 elVeiGgsFRip~vm~~sGa~lvEV-GttN---~t~~~Dye~AI~e~T--a~ll~Vh~Sn~~i~GFt~~~~---~~el~~ 164 (367)
T PF03841_consen 94 ELVEIGGSFRIPDVMRQSGARLVEV-GTTN---RTHLSDYEKAITENT--AALLKVHTSNFRIQGFTGEVS---LEELAE 164 (367)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ccccccccccccccccccccccccc-cccc---ccccccccccccccc--ccccccccccccccccccccc---HHHHHH
Confidence 32 23557888899999888 3321 236788999999888 888777877753 32 235 899999
Q ss_pred HHHHcCCEEEEccccccccc----C----CCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 192 LCKAAGSWLVVDNTYEYFMY----D----GRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 192 l~~~~~~~li~D~a~~~~~~----~----~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
++++||+++|+|-..+.+.. + ..-......+.+++++|-.|.+| |...|.++++ +++++++++-.-.
T Consensus 165 la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gk---k~lI~~lk~~pl~ 239 (367)
T PF03841_consen 165 LAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGK---KELIEKLKKHPLG 239 (367)
T ss_dssp HHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEE---HHHHHHHHHHHHT
T ss_pred HHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeC---HHHHHHHhhCCCc
Confidence 99999999999998754431 1 11122344678899999999996 6678999999 8999999875555
Q ss_pred CCcCccHHHHHHHHHHhcC
Q 015768 264 IPICASIISQHLALYSLQT 282 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~ 282 (400)
..+.+......++.+.|+.
T Consensus 240 RalrvdK~tla~L~atL~~ 258 (367)
T PF03841_consen 240 RALRVDKLTLAALEATLRL 258 (367)
T ss_dssp TT-B--HHHHHHHHHHHHH
T ss_pred ceEeeCHHHHHHHHHHHHH
Confidence 5666777777766666653
No 384
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.21 E-value=2.3e-10 Score=91.93 Aligned_cols=90 Identities=18% Similarity=0.357 Sum_probs=72.1
Q ss_pred CCeEEcCCCCCC-----------------CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC----CC
Q 015768 30 KNAVSLAQGVVY-----------------WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK----LY 88 (400)
Q Consensus 30 ~~~i~~~~~~~~-----------------~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~----~~ 88 (400)
.++|+|+.+++- +..|+.+++++.+. ..|++..|..++|+++++|+.+.+| ++
T Consensus 43 ~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~ 116 (153)
T PLN02994 43 QGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLANFRKAIANFMAEARGGRVKFD 116 (153)
T ss_pred CceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHHHHHHHHHHHHHHhCCCCccc
Confidence 558888887652 22233334444442 2377888999999999999999876 45
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccc
Q 015768 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN 125 (400)
Q Consensus 89 ~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~ 125 (400)
+++|++|+|+++++..++.++++|||.|+++.|+|++
T Consensus 117 pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 117 ADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred hhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 8999999999999999999999999999999999974
No 385
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.19 E-value=6.9e-08 Score=87.41 Aligned_cols=337 Identities=15% Similarity=0.119 Sum_probs=194.4
Q ss_pred HHHHHHHHhcCCCeEEcC-CCCCCCCCcHHHHHHHHHhhc-CCCCCCCCCCCCcHHHHHHHHHH---HHhhcCCCCCcEE
Q 015768 19 MVQIQELVRGAKNAVSLA-QGVVYWQPPKMAMEKVKELVW-DPSISKYGADEGLPELRDALVKK---LNQENKLYKSSVM 93 (400)
Q Consensus 19 ~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~v~~a~~~~~~-~~~~~~y~~~~g~~~~~~~~a~~---l~~~~~~~~~~i~ 93 (400)
..++.......+.+..|- .|.-+.-.|+-+.+.+.+.-. -....+|.+.. ..-.-+++-+| +.++.|++--+--
T Consensus 63 l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEI-SQGrLqaLfefQtlv~dLTGm~VANAS 141 (450)
T COG0403 63 LAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEI-SQGRLEALFEFQTLVADLTGLDVANAS 141 (450)
T ss_pred HHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhh-hhHHHHHHHHHHHHHHHHhCCCcccch
Confidence 334444444455554442 333333345555545544321 11133443321 11222333333 4444588877777
Q ss_pred EeCChHHHHHHHHHHhc---CCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCe
Q 015768 94 VTAGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK 166 (400)
Q Consensus 94 ~~~g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~ 166 (400)
+.-++|.+=+.++.+.. ++..+++|+..+|+.+.+.++. .|++++.+ +.+ |+++++.. .. ....
T Consensus 142 m~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~-~~~------d~~~l~~~-~~-~~~~ 212 (450)
T COG0403 142 MLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVV-DAD------DLDDLESA-DD-GDVF 212 (450)
T ss_pred hhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEe-ccc------hhhhhhhc-cc-cCeE
Confidence 77888888888888774 2358999999999999988864 45676666 443 66777777 43 2248
Q ss_pred EEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc---cCCCcceeE
Q 015768 167 LVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA---YGMMGWRVG 242 (400)
Q Consensus 167 ~v~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~---~g~~g~~~G 242 (400)
++++.+|+. .| ...+ +.++.+.+++++.++++=.---.+.. -..+...+.+|++++.... +|.+|..+|
T Consensus 213 gv~vQyP~~-~G~~~~d---~~~l~~~~h~~~al~~v~aDplaL~L---L~pPGe~GADIvvG~~QrfGvPmgfGGPhag 285 (450)
T COG0403 213 GVLVQYPNT-FGIVEED---LRALIEAAHSAGALVIVAADPLALGL---LKPPGEFGADIVVGSAQRFGVPMGFGGPHAG 285 (450)
T ss_pred EEEEecCCC-CCccchh---HHHHHHHHhhcCCEEEEEechhHhhc---cCCccccCCceEEecCcccCCCcCCCCccee
Confidence 888888874 55 5555 99999999999998876321111111 1112345678888886542 234577789
Q ss_pred EEEccCCcHHHHHHH----------------------------HHhhccCCcCccHHHH-HHH-HHHhcCCcHHHHHHHH
Q 015768 243 YIAYPSEVEGFATQL----------------------------LKVQDNIPICASIISQ-HLA-LYSLQTGPEWVTERVK 292 (400)
Q Consensus 243 ~i~~~~~~~~~~~~l----------------------------~~~~~~~~~~~~~~~~-~~~-~~~l~~~~~~~~~~~~ 292 (400)
|+.++ +++..++ ++.+...+.+.+.... .++ ..+.-.+.+.+++...
T Consensus 286 ~fA~~---~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~ 362 (450)
T COG0403 286 YFAVK---DEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAE 362 (450)
T ss_pred eeeEh---HhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 99888 4443332 1111112222222111 111 1122235677899999
Q ss_pred HHHHHHHHHHHHhccCCC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768 293 DLVRNREIIREALSPLGE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED 370 (400)
Q Consensus 293 ~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~ 370 (400)
+..+...++.+.|++.+. ..+....--.-+.++++. .....+..+.. ..|+.+..- .++.+-+++.- .+.+
T Consensus 363 r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~--~~~~~l~~~~~-~~G~~L~~~----~~~~~~ia~tEt~t~~ 435 (450)
T COG0403 363 RIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE--EVAEALLAAAI-AGGINLRRV----DADTVLIALTETTTKE 435 (450)
T ss_pred HHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch--hHHHHHHHHHH-hcCCceeee----cCCceEEEeecccCHH
Confidence 999999999999997653 244333222334556653 12444555443 577777542 24477777776 6788
Q ss_pred HHHHHHHHHHHH
Q 015768 371 DCKAAADRLRRG 382 (400)
Q Consensus 371 ~~~~~~~~l~~~ 382 (400)
+++.+++.+...
T Consensus 436 ~i~~l~~~~~~~ 447 (450)
T COG0403 436 DIDALVAAFGGV 447 (450)
T ss_pred HHHHHHHHHhhh
Confidence 888888777654
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.11 E-value=5e-08 Score=86.83 Aligned_cols=328 Identities=13% Similarity=0.073 Sum_probs=192.6
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHhhcCCCCC-cEEEe-CChHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYKS-SVMVT-AGANQAF 102 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~-~g~t~a~ 102 (400)
...+|+.| +...|++|++...+.+.+-...+++ .......+.+...+.+++++++|.+ +|+|+ .|+|...
T Consensus 5 ~~~nFsaG--Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf 82 (365)
T COG1932 5 RVYNFSAG--PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCCC--cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHH
Confidence 35667776 2335788888887777653221111 2333456667777778888899753 56665 6688888
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchh-HHHHhcCcEEEEeccC---CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSY-MSFQMTGVTHILVGPC---SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~---~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG 178 (400)
..+...|+.++..-.+....|..+. .-++..+..+....+. .+-+..++++.+. +..+. .-|++|+-...+|
T Consensus 83 ~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~--ayv~~~~NeTi~G 158 (365)
T COG1932 83 AMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDND--AYVHFCWNETISG 158 (365)
T ss_pred HHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCc--cEEEEecCCcccc
Confidence 8998888865433133334443222 2234444322111011 1123333443332 22212 3466664445668
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015768 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 258 (400)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~ 258 (400)
+-++. ...+. .+.+++.|.+...+.. +. +....+++..|..|.+|..| ++.++.+ +++.++++
T Consensus 159 v~v~~--~p~~~-----~~~~~v~D~SS~ilsr---~i--Dvsk~dviyagaQKnlGpaG--ltvvIvr---~~~l~r~~ 221 (365)
T COG1932 159 VEVPE--LPDIG-----SDGLLVADASSAILSR---PI--DVSKYDVIYAGAQKNLGPAG--LTVVIVR---PDLLERAE 221 (365)
T ss_pred eEccC--CCCCC-----CCceEEEecccHHhcC---CC--ChhHcceEEEehhhccCccc--eEEEEEc---HHHHhccc
Confidence 76651 22211 1278999988764432 22 22345588899999998666 7888888 78888876
Q ss_pred Hhh-------------ccCCcCccHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhccCCCCc---ccCCCCce
Q 015768 259 KVQ-------------DNIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGA---VKGGEGAI 320 (400)
Q Consensus 259 ~~~-------------~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~ 320 (400)
... .....+++.+..+.+...++- ....++.+.++-..+.+.|.+.+.+-++.. .....+.+
T Consensus 222 ~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~m 301 (365)
T COG1932 222 SYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRM 301 (365)
T ss_pred ccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccce
Confidence 541 122234566666655554441 123467777888888999999998876521 11344567
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.+++++.... -...+...+ +++|+..--| ....+.+|+++.. ++.++++.+++-++.+.+.
T Consensus 302 nV~f~~~~~~-ld~~fv~ea-e~~gl~~lkG--hr~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 302 NVTFTLVDAE-LDKGFVAEA-EAAGLIYLKG--HRSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred eEEEEcCcHH-HHHHHHHHH-HHcCCceecc--ccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 7778876432 134455544 4677777666 2356779999887 8888877777777666554
No 387
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.10 E-value=1.5e-08 Score=91.86 Aligned_cols=301 Identities=17% Similarity=0.109 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHhhcCCC-CCcEEEeCChH-HHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--C
Q 015768 72 ELRDALVKKLNQENKLY-KSSVMVTAGAN-QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--S 145 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~-~~~i~~~~g~t-~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~ 145 (400)
.+...++..+-+..|++ ....+++|-+| .++...+.++. ..++.|+.+.-.+.+...++...|.+++.+ |.. +
T Consensus 56 ~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV-~~~~~~ 134 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVV-ENVLEG 134 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE--EEEET
T ss_pred HHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEe-eccCCC
Confidence 34555555555566776 35556665543 44555555664 456899999999989999999999999988 532 2
Q ss_pred CCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc------c
Q 015768 146 KTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC------C 218 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~------~ 218 (400)
+....|++.+++.+++ +..+.+.++++++--.|+..| ++.+|+++|+++|++.++-.||+--. .... .
T Consensus 135 d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D--~i~~IakiC~~~~IPhlvNnAYgvQ~---~~~~~~i~~a~ 209 (389)
T PF05889_consen 135 DELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPD--DIEEIAKICKEYDIPHLVNNAYGVQS---SKCMHLIQQAW 209 (389)
T ss_dssp TEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT----HHHHHHHHHHH
T ss_pred CeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc--cHHHHHHHHHHcCCceEEccchhhhH---HHHHHHHHHHH
Confidence 3345578888888863 233467777776655566655 59999999999999999999998311 1000 0
Q ss_pred cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768 219 VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298 (400)
Q Consensus 219 ~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (400)
-.+..++++.|+-|.| +-|...+.+.+++ +..+..+...........+.. ......+.-|...............
T Consensus 210 ~~GRvda~vqS~dkNF-~VPvGgai~As~~--~~~i~~vs~~YpGRas~sp~l--d~~itLl~LG~~g~~~ll~~r~~~f 284 (389)
T PF05889_consen 210 RVGRVDAFVQSTDKNF-MVPVGGAIMASFD--PSGILAVSKEYPGRASASPSL--DLFITLLSLGCTGYGALLKERKASF 284 (389)
T ss_dssp HHSTCSEEEEEHHHHH-CEESSHEEEEESS--HHHHHHHHHTSHSHBTSHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcceeeeecCCCE-EecCCCcEEEecC--HHHHHHHHHHhhhhhhcccch--HHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 0134457888999999 4444457777776 788888876544333333333 2333333323322333333333333
Q ss_pred HHHHHHhc----cCCC--CcccCCCCceEEEee-CCCCC-CCHHHHHHHHHHhcCeE----EeCCCcc-------CCCCe
Q 015768 299 EIIREALS----PLGE--GAVKGGEGAIYLWAR-LPEKH-LDDFEVVRWLAHRHGVV----VIPGGAC-------GCRGH 359 (400)
Q Consensus 299 ~~l~~~L~----~~~~--~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~l~~~~gi~----v~~g~~~-------~~~~~ 359 (400)
.++.+.|+ +.+. .........+.+.+. +.... .+...+...|. .+||. +.++... +...+
T Consensus 285 ~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf-~R~VsG~RvV~~~~~~~tsh~~~yp~~Y 363 (389)
T PF05889_consen 285 PYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLF-KRGVSGIRVVTPGGKKQTSHSSNYPCPY 363 (389)
T ss_dssp HHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHH-HTTEESSEEEETSSCEEETTSS--SSSE
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHH-hCCcccceeeccCCCcccccCCCCchHH
Confidence 44444333 3333 111122223333332 11111 12345666554 77765 2333222 12367
Q ss_pred EEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 360 LRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 360 iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
+-++-+. +++||++..+++|++.++
T Consensus 364 lt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 364 LTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 8885444 799999999999999874
No 388
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.02 E-value=1.2e-06 Score=77.47 Aligned_cols=323 Identities=13% Similarity=0.129 Sum_probs=196.7
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC-----CCCEEEE
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD-----AGDSVVM 118 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~-----~gd~vlv 118 (400)
++...+.+|..- --.|+.+.+.-.+++++.+.+ | -+.++-|.-+-.|=++++..+++ ||.+.++
T Consensus 60 ms~~qwaamm~G-----DEAYagsrs~~~L~~avkdif----G--fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~ 128 (471)
T COG3033 60 MTDKQWAAMMRG-----DEAYAGSRSYYALADAVKDIF----G--FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVA 128 (471)
T ss_pred ccHHHHHHHhcc-----chhhcccccHHHHHHHHHHhc----C--ceeeeeccCCccHHHHHHHHHhhhccccCCccccc
Confidence 455555555442 234767777888888888877 5 35566777777777777777665 4555666
Q ss_pred eCCCccchh-HHHHhcCcEEEEeccCCCC---------CCCCCHHHHHHhhccC--CCCeEEEEe-CCCCCCccCCCHHH
Q 015768 119 FAPYYFNSY-MSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETK--PTPKLVSVV-NPGNPSGTYIPERL 185 (400)
Q Consensus 119 ~~p~~~~~~-~~~~~~g~~~~~~~~~~~~---------~~~~~~e~l~~~l~~~--~~~~~v~l~-~p~nptG~~~~~~~ 185 (400)
++..|+... ...+..|+.++-+ +.++. ..++|++.|++++.+. ..+-.|+++ ..|...|+..|.+.
T Consensus 129 ~sN~~FdTTr~h~~~ng~~~~n~-~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n 207 (471)
T COG3033 129 FSNYHFDTTRGHIQINGATPRNV-YVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMAN 207 (471)
T ss_pred cccceecchhHHHHhcCCccccc-cccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHh
Confidence 777775544 5567778766555 44321 2477999999999832 113444444 34567899999999
Q ss_pred HHHHHHHHHHcCCEEEEccccc----ccccCCCCc---cccC-------CCcEEEEeccccccCCCcceeEEEEccCCc-
Q 015768 186 LKRISDLCKAAGSWLVVDNTYE----YFMYDGRKH---CCVE-------GDHVVNLFSFSKAYGMMGWRVGYIAYPSEV- 250 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~----~~~~~~~~~---~~~~-------~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~- 250 (400)
+++..++|++|++.++.|.+.. .|.....+- +... .-.+-++-|.-|-- +..+ .|+++.+++.
T Consensus 208 ~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~-lvnm-GGfl~~~D~~~ 285 (471)
T COG3033 208 MKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDG-LVNM-GGFLCFKDDSF 285 (471)
T ss_pred HHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccc-eecc-ccEEEecCccH
Confidence 9999999999999999998753 222221111 1100 01122233444432 2111 2788888731
Q ss_pred HHHHHHHHHhhc-----cCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768 251 EGFATQLLKVQD-----NIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW 323 (400)
Q Consensus 251 ~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 323 (400)
-++.+.++...- .+..+.+.-...+++..|.++ .+|+.++.++ .++|.++|++.+. .+..|.+|.-++
T Consensus 286 fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Q----v~YL~~~l~~~GV-pi~~paGGHavf 360 (471)
T COG3033 286 FDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQ----VQYLADGLEEAGV-PIVQPAGGHAVF 360 (471)
T ss_pred HHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHH----HHHHHHHHHhcCC-eeEecCCCceEE
Confidence 135555543221 122234445555666666653 2555555544 4677788888775 566677777777
Q ss_pred eeCC-------CCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------CCeEEEEecc--CCHHHHHHHHHHHHH
Q 015768 324 ARLP-------EKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------RGHLRISFGG--LVEDDCKAAADRLRR 381 (400)
Q Consensus 324 ~~~~-------~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------~~~iRi~~~~--~~~~~~~~~~~~l~~ 381 (400)
++.. .....++.++.+|.++.||....-..+.. -.-+|+++.+ -|.+-++-.++.+++
T Consensus 361 vda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~ 440 (471)
T COG3033 361 VDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKA 440 (471)
T ss_pred eehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHH
Confidence 6632 22235778888898899998765444421 1469999876 466777777777766
Q ss_pred HHHH
Q 015768 382 GLEE 385 (400)
Q Consensus 382 ~l~~ 385 (400)
..++
T Consensus 441 l~e~ 444 (471)
T COG3033 441 LKEN 444 (471)
T ss_pred HHhc
Confidence 6654
No 389
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.94 E-value=1.1e-06 Score=76.19 Aligned_cols=340 Identities=11% Similarity=0.003 Sum_probs=195.6
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcC-------CC-CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCCh
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWD-------PS-ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGA 98 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~-------~~-~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~ 98 (400)
.++++.|.|+.++..+ +|..+...+.+.+++ +. .+--+.....+.+...++..+ |.+.++|.++++-
T Consensus 63 ~~d~~~iYlcGNSLGL-mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV----GA~e~EvavmNsL 137 (465)
T KOG3846|consen 63 SDDKPVIYLCGNSLGL-MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV----GAQENEVAVMNSL 137 (465)
T ss_pred CCCCCeEEEecccccc-CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc----cCCchhhhhHhhh
Confidence 4457788888876554 344444445444432 10 111111233444555555544 8888999999999
Q ss_pred HHHHHHHHHHhcCCC---CEEEEeCCCccchh----HHHHhcCcE----EEEeccCCCCCCCCCHHHHHHhhc-cCCCCe
Q 015768 99 NQAFVNIVLTLCDAG---DSVVMFAPYYFNSY----MSFQMTGVT----HILVGPCSSKTLHPDADWLEKTLE-TKPTPK 166 (400)
Q Consensus 99 t~a~~~~~~~l~~~g---d~vlv~~p~~~~~~----~~~~~~g~~----~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~ 166 (400)
|.-++.++.++-+|- -+|+...-.|++-+ ..++..|.. .+.+.|-..+ -.+..|++.+.+. .+..+.
T Consensus 138 TvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGE-etlRteDILd~IEkngDeiA 216 (465)
T KOG3846|consen 138 TVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGE-ETLRTEDILDTIEKNGDEIA 216 (465)
T ss_pred hhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccc-cchhHHHHHHHHHhcCCeEE
Confidence 999999999998765 36888887776643 445556653 3444232222 2456788888776 444467
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC--CCcceeEEE
Q 015768 167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG--MMGWRVGYI 244 (400)
Q Consensus 167 ~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g--~~g~~~G~i 244 (400)
+|+++..+.-||+.++ +.+|...-+..|.++=.|-+|. .+..+....+++.++.+-...|.+. .+|+...++
T Consensus 217 ~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHA---vgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFv 290 (465)
T KOG3846|consen 217 LVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHA---VGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFV 290 (465)
T ss_pred EEEeecceeecccccc---hhhhhhcccCCCcEechhhhhh---hcCCceEEeecCCceEEEeeecccccCCCccceeee
Confidence 7778888999999999 7777755556799999999888 4455555556676666655678773 233322233
Q ss_pred EccCCcHHHHHHHHHhh------------------cc---CCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHH
Q 015768 245 AYPSEVEGFATQLLKVQ------------------DN---IPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIR 302 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~~~------------------~~---~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~ 302 (400)
..+. ..+...++-.+- .. ...+++.....++...|+... -.+.+.+++..-+..++.
T Consensus 291 Hekh-~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYle 369 (465)
T KOG3846|consen 291 HEKH-TKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLE 369 (465)
T ss_pred ehhh-hcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHH
Confidence 3222 122222322110 11 112344444444444554311 112333333333333333
Q ss_pred HHhccCCC-----------CcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-
Q 015768 303 EALSPLGE-----------GAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG- 366 (400)
Q Consensus 303 ~~L~~~~~-----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~- 366 (400)
..++...+ +.+..|. -|-.+.+.+.. +...++.+|- ++|+..-. ..|+.||+.+..
T Consensus 370 yL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL~-krGv~~Dk----R~PNvIRvAPvpL 441 (465)
T KOG3846|consen 370 YLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQELH-KRGVIGDK----RRPNVIRVAPVPL 441 (465)
T ss_pred HHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC---CchHHHHHHH-HcCeeccc----cCCCceEeecchh
Confidence 33332111 1122221 13344444443 2356777774 88988743 247899999665
Q ss_pred -CCHHHHHHHHHHHHHHHHHHh
Q 015768 367 -LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 367 -~~~~~~~~~~~~l~~~l~~~~ 387 (400)
++..|+...+..|.+++..+.
T Consensus 442 YN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 442 YNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred hccHHHHHHHHHHHHHHHHHhh
Confidence 889999999999999987754
No 390
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.91 E-value=1.2e-06 Score=88.81 Aligned_cols=324 Identities=14% Similarity=0.088 Sum_probs=182.9
Q ss_pred HHHHHHHhcCCCeEEc-CCCCCCCCCcHHHHHHHHHhhc-CCCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEe
Q 015768 20 VQIQELVRGAKNAVSL-AQGVVYWQPPKMAMEKVKELVW-DPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVT 95 (400)
Q Consensus 20 ~~~~~~~~~~~~~i~~-~~~~~~~~~~~~v~~a~~~~~~-~~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~ 95 (400)
..+++.-+..+.+..| +.|.-+.-.|+.+++.+.+.-. -....+|.+. +|.-+..=+.-..+.++.|++.-+--+.
T Consensus 68 ~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~ 147 (954)
T PRK12566 68 ARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLL 147 (954)
T ss_pred HHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhc
Confidence 3444444444444444 2333222344444455544321 1113445432 3333322233333555558775555566
Q ss_pred CChHHHHHHHHHHhc---CCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768 96 AGANQAFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v 168 (400)
.++|.+=+.++.+.. ++..+|+|+...|+.+...++. .|++++. +++++.+..+ ..+|
T Consensus 148 D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~--~~~v 212 (954)
T PRK12566 148 DEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHA--VFGA 212 (954)
T ss_pred cchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCC--EEEE
Confidence 677776665555543 2246899999999888877654 4555442 2233334333 4788
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc----CCCcceeEEE
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY----GMMGWRVGYI 244 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~----g~~g~~~G~i 244 (400)
++.+|+. .|.+-+ +++|.++++++|.++++ .+.- +..+. -..+...+.||++++ ++.| |.+|.-.|++
T Consensus 213 ~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~~-~~d~-laL~l-l~~Pge~GADI~vG~-~Q~fGvp~~~GGP~ag~~ 284 (954)
T PRK12566 213 LLQYPDT-HGEIRD---LRPLIDQLHGQQALACV-AADL-LSLLV-LTPPGELGADVVLGS-TQRFGVPMGYGGPHAAYF 284 (954)
T ss_pred EEECCCC-ceEEcc---HHHHHHHHHHcCCEEEE-EeCH-HHHhC-CCChhhcCCcEEeeC-CCcCCCCCCCCCCCeeee
Confidence 8888865 688866 89999999999998663 3321 11111 112234567788764 2333 3346668999
Q ss_pred EccCCcHHHHHHHHH----------------------------hhccCCcCcc-HHHHHHHHHHhc-CCcHHHHHHHHHH
Q 015768 245 AYPSEVEGFATQLLK----------------------------VQDNIPICAS-IISQHLALYSLQ-TGPEWVTERVKDL 294 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~~~~~~~~ 294 (400)
.++ +++..++.. .+...+.+.+ .+...++..++. .|.+.+++..++.
T Consensus 285 a~~---~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~ 361 (954)
T PRK12566 285 ACR---DDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRV 361 (954)
T ss_pred eeh---HHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 888 455444321 1111112222 222222222222 3556678888888
Q ss_pred HHHHHHHHHHhccCCCCcccCCCCceEE--EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHH
Q 015768 295 VRNREIIREALSPLGEGAVKGGEGAIYL--WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD 371 (400)
Q Consensus 295 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~ 371 (400)
..++.++.+.|++.+. ++... .+|- .+++.. +..++..... +.||.++.- ..+.+.+|+.- .+.+|
T Consensus 362 ~~~a~~l~~~l~~~g~-~~~~~--~fF~~~~v~~~~---~~~~~~~~a~-~~~~n~r~~----~~~~~~~s~de~~~~~~ 430 (954)
T PRK12566 362 HRLTAILAAGLEAKGI-KRLNR--HFFDTLTLEVGG---AQAAIIESAE-AARINLRIL----GRGRLGVSLDETCDEAT 430 (954)
T ss_pred HHHHHHHHHHHHhcCC-ccccC--CccceEEEEccC---CHHHHHHHHH-HCCCeeEEe----CCCeEEEEeCCCCCHHH
Confidence 8899999999999654 44332 3343 334421 3556666554 789888753 25678899887 78899
Q ss_pred HHHHHHHHH
Q 015768 372 CKAAADRLR 380 (400)
Q Consensus 372 ~~~~~~~l~ 380 (400)
++.++..+.
T Consensus 431 ~~~~~~~f~ 439 (954)
T PRK12566 431 VARLFDIFL 439 (954)
T ss_pred HHHHHHHhc
Confidence 988888884
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.79 E-value=3.6e-07 Score=80.52 Aligned_cols=215 Identities=14% Similarity=0.097 Sum_probs=129.3
Q ss_pred CHHHHHHhhc----cCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC----CccccCC
Q 015768 151 DADWLEKTLE----TKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR----KHCCVEG 221 (400)
Q Consensus 151 ~~e~l~~~l~----~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~----~~~~~~~ 221 (400)
.+++++++|. .+..+.+++++..+...|. -.+++.++.|.++|++|++.+|+||++.+....|. .++.+..
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 4677777776 2223566777766888886 57999999999999999999999999986655442 2333444
Q ss_pred CcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 222 DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 222 ~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
+.+++ +|||-+- .| ||.... +++-. +.++...++...+.-...+...++.-. .+...+......+.|
T Consensus 334 PpD~v--TFSKK~q-~g---Gffh~~----~frpn-~pYrifNTWmGdP~k~lll~~vv~~I~--~~~Ll~n~~~vG~~l 400 (484)
T KOG1405|consen 334 PPDVV--TFSKKFQ-TG---GFFHDE----EFRPN-EPYRIFNTWMGDPSKNLLLEEVVQEIK--REDLLNNVAHVGKAL 400 (484)
T ss_pred Cccce--ehhhhhh-cC---ccccCc----ccCCC-chHHHhhhhcCChHHHHHHHHHHHHHh--HHHHHHHHHHHHHHH
Confidence 55555 7789883 55 655433 22110 112222355545544444445554311 245556666667777
Q ss_pred HHHhccC----CC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHH
Q 015768 302 REALSPL----GE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAA 375 (400)
Q Consensus 302 ~~~L~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~ 375 (400)
..+|.++ |. +.-.+.. |-|+.+++|... -.+.+.. .++-.|+.+-.+ +...||+-++. .++.-.+-.
T Consensus 401 ~~gL~~Lq~~~p~~~~~~RGr-GTF~a~d~ps~~-~Rdk~i~-~~~~nGv~~GGC----g~~siRfRPsLvf~~~Ha~i~ 473 (484)
T KOG1405|consen 401 LKGLLELQAKYPGKINNLRGR-GTFIAWDCPSGS-IRDKLIL-IARLNGVNLGGC----GDKSIRFRPSLVFRKHHADIF 473 (484)
T ss_pred HHHHHHHHHhCchhhhccccc-ceEEEEeCCChH-HHHHHHH-HHHHcCceeccc----ccceeeeccceeehhhhHHHH
Confidence 7776653 33 2233344 667777888653 2344555 345788887432 34567776654 345555566
Q ss_pred HHHHHHHHHH
Q 015768 376 ADRLRRGLEE 385 (400)
Q Consensus 376 ~~~l~~~l~~ 385 (400)
++++.+.+..
T Consensus 474 l~~~~k~l~~ 483 (484)
T KOG1405|consen 474 LDIFDKILAG 483 (484)
T ss_pred HHHHHHHhcc
Confidence 6666666543
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.67 E-value=7.6e-06 Score=77.82 Aligned_cols=339 Identities=15% Similarity=0.123 Sum_probs=199.7
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC---CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH-HH---H
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD---EGLPELRDALVKKLNQENKLYKSSVMVTAGAN-QA---F 102 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t-~a---~ 102 (400)
+.+|++++..+-+....++..--...+.+ +.+|.|. +|..++...+..+|.+..| -|.+-+.+++- ++ =
T Consensus 539 hSMiPLGSCTMKLNsttEmmPiTwp~fan--IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG--~D~~s~QPNsGA~GEYaG 614 (1001)
T KOG2040|consen 539 HSMIPLGSCTMKLNSTTEMMPITWPEFAN--IHPFAPVEQAQGYQQLFTELEKDLCEITG--FDSFSLQPNSGAQGEYAG 614 (1001)
T ss_pred hhcccccceeeeccccceeccccchhhcc--CCCCCchHHHhhHHHHHHHHHHHhheeec--ccceeecCCCCcccchhh
Confidence 45666666554443333333322233333 5666553 6677777788888765555 46666654322 22 2
Q ss_pred HHHHHHh-cCCCC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCC
Q 015768 103 VNIVLTL-CDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNP 176 (400)
Q Consensus 103 ~~~~~~l-~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~np 176 (400)
..++++. ...|+ .-+++...|..-...+..+|.+++.| ..+.+| ++|..+|++.... .....++.++.|+.-
T Consensus 615 L~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV-~~~~~G-~id~~dLk~kaekh~~~Laa~MvTYPST~ 692 (1001)
T KOG2040|consen 615 LRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPV-GCDANG-NIDMVDLKAKAEKHKDNLAALMVTYPSTH 692 (1001)
T ss_pred HHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEe-eccCCC-CccHHHHHHHHHHhhhhhheeEEeccccc
Confidence 2344444 23332 35777888877777788899999999 787777 6899999988763 333578888888753
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC----CcceeEEEEccCCcHH
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM----MGWRVGYIAYPSEVEG 252 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~----~g~~~G~i~~~~~~~~ 252 (400)
|+. .+.+.+++++.++||--+..|.+--.--.+- ....+.+.++.=..++|.|.. +|..+|=|..+ +-
T Consensus 693 -Gvf--E~~i~d~cd~iHehGGQVYlDGANMNAqVGl--c~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK---~H 764 (1001)
T KOG2040|consen 693 -GVF--EEGIDDICDIIHEHGGQVYLDGANMNAQVGL--CRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVK---KH 764 (1001)
T ss_pred -ccc--cccHHHHHHHHHhcCCEEEecCCCccceecc--cCCccccccceeecccceeeecCCCCCCCCCccchh---hh
Confidence 433 2239999999999999999999865221111 122334556766788998843 34455666655 22
Q ss_pred HHHHHHHhh--------c--------cCCcCcc--HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 253 FATQLLKVQ--------D--------NIPICAS--IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 253 ~~~~l~~~~--------~--------~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
++..+..-. . ..+|+.+ .+.-++..+.+-. ..++...+...-+++++.+.|+.+-.+-+.
T Consensus 765 LapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~--~GL~~as~~AiLNaNYMakRLe~hYkil~~ 842 (1001)
T KOG2040|consen 765 LAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGS--GGLKDASKIAILNANYMAKRLESHYKILFR 842 (1001)
T ss_pred ccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcc--cccchhhHHHhhhhHHHHHHHhhccceeEe
Confidence 322221100 0 0112211 1223444444432 234444555566789999999986543444
Q ss_pred CCCCceE---EEeeCCC----CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIY---LWARLPE----KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 315 ~~~~~~~---~~~~~~~----~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
... +.. +.+++.+ ...+..+++.+|. ++|..-..-+ +--++.+-|-+.- .+.+++++.++++-..-+++
T Consensus 843 ~~~-~~vaHEFIlD~r~fK~~agieavDvAKRL~-DYgFHaPTms-wPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 843 GEN-GLVAHEFILDLRPFKKTAGIEAVDVAKRLM-DYGFHAPTMS-WPVAGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred cCC-cceeeeeeeechhhccccCCcHHHHHHHHH-hccCCCCccc-cccCCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 444 321 2233322 2357889999986 8998763333 3346777777665 67788888888776655554
Q ss_pred h
Q 015768 387 V 387 (400)
Q Consensus 387 ~ 387 (400)
.
T Consensus 920 ~ 920 (1001)
T KOG2040|consen 920 A 920 (1001)
T ss_pred H
Confidence 3
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.14 E-value=2.6e-05 Score=66.34 Aligned_cols=293 Identities=16% Similarity=0.160 Sum_probs=144.4
Q ss_pred CcEEEeCChHHHHHHHHHHhc--CCCCE-EEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCC
Q 015768 90 SSVMVTAGANQAFVNIVLTLC--DAGDS-VVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTP 165 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~~~l~--~~gd~-vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~ 165 (400)
..+++.-.+...+...+.++. +|..+ |+-..-.-.+....+-..|++++.+.++.+ +...-|++.+++.+.+.. +
T Consensus 77 nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g-~ 155 (432)
T KOG3843|consen 77 NCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELG-E 155 (432)
T ss_pred ceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHHHHhC-C
Confidence 333333333355666666664 34332 222222223344455678999888855543 334558899998887543 3
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccCCCcEEEEeccccccCCCcceeE
Q 015768 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVEGDHVVNLFSFSKAYGMMGWRVG 242 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G 242 (400)
..|+..+.....=..-+++.+++|+.+|..|+++-|+..+|+.-.-.-.... ..-+..+.++.|+-|.|-+| .. |
T Consensus 156 dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~vp-vg-g 233 (432)
T KOG3843|consen 156 DCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVP-VG-G 233 (432)
T ss_pred ceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcceee-cc-h
Confidence 4444332222111223567899999999999999999999983211100000 00134456788999999533 22 3
Q ss_pred EEE-ccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHH----HHHHHHHHHHHHHHHHHHhccCCCC--cccC
Q 015768 243 YIA-YPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEW----VTERVKDLVRNREIIREALSPLGEG--AVKG 315 (400)
Q Consensus 243 ~i~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~ 315 (400)
.++ .=+ ..+++.+.+.........+ +...+...|..+... +.+..+-..++++.+...-+.++.- ....
T Consensus 234 aiia~fk--~n~iq~iak~ypgrasa~p--s~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~ 309 (432)
T KOG3843|consen 234 AIIAAFK--DNFIQEIAKMYPGRASASP--SLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPE 309 (432)
T ss_pred hHhhHhH--HHHHHHHHHhCCCccccCc--cHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCC
Confidence 333 222 4677777665543333333 333333344333322 2222333333333333333333331 1111
Q ss_pred CCCceEEEee-CCCCCCCHHHHHHHHHHhcCeE---EeCCCccC------------------CCCeEEEEecc-CCHHHH
Q 015768 316 GEGAIYLWAR-LPEKHLDDFEVVRWLAHRHGVV---VIPGGACG------------------CRGHLRISFGG-LVEDDC 372 (400)
Q Consensus 316 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~---v~~g~~~~------------------~~~~iRi~~~~-~~~~~~ 372 (400)
.+.+.-+.++ +++.....-.++--++-..||. +.|.+.+. ...++-+..+. ++..|+
T Consensus 310 n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~~hdl 389 (432)
T KOG3843|consen 310 NEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMKDHDL 389 (432)
T ss_pred chhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCchhHhhHHHhcCCcHhHH
Confidence 1212222222 2221100111222222244443 33333221 01244444333 688899
Q ss_pred HHHHHHHHHHHHHHhcc
Q 015768 373 KAAADRLRRGLEELVKD 389 (400)
Q Consensus 373 ~~~~~~l~~~l~~~~~~ 389 (400)
++...+|...+.++.++
T Consensus 390 d~~~~rl~~~~a~~~ke 406 (432)
T KOG3843|consen 390 DEFFNRLDRCLAAFRKE 406 (432)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998888754
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.62 E-value=0.0088 Score=51.91 Aligned_cols=329 Identities=13% Similarity=0.108 Sum_probs=177.9
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHhhcCCCC-CcE-EEeCChHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQENKLYK-SSV-MVTAGANQA 101 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~~~~~~~-~~i-~~~~g~t~a 101 (400)
...++|..| +..+|.+|+..+.+.+-+-...+-+ .+.....+.+.....+.++++++. -.| ++..|+|.-
T Consensus 6 ~~vvnFaaG--PAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~q 83 (370)
T KOG2790|consen 6 ERVVNFAAG--PAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQ 83 (370)
T ss_pred cceeecCCC--cccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCccc
Confidence 356788776 3456788888888877652211111 223344566666666777778874 344 445777777
Q ss_pred HHHHHHHhc--CCCCEE-EEeCCCccc-hhHHHHhcCcE-EEEeccCCCCC--CCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 102 FVNIVLTLC--DAGDSV-VMFAPYYFN-SYMSFQMTGVT-HILVGPCSSKT--LHPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 102 ~~~~~~~l~--~~gd~v-lv~~p~~~~-~~~~~~~~g~~-~~~~~~~~~~~--~~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
+..+...|. +.|+.. .+...+|.. ..+-++..|.. .+.. +..+.. -.+|.+.++. +++. +.|+.|.-.
T Consensus 84 FaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~-~~k~y~ygkvPd~~~w~~--~~da--~yvyyCaNE 158 (370)
T KOG2790|consen 84 FAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIP-KLKSYTYGKVPDPSTWEL--NPDA--SYVYYCANE 158 (370)
T ss_pred ccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEec-cccccccCcCCChhhccc--CCCc--cEEEEecCc
Confidence 777776665 455322 222333322 11233455543 3333 333322 2344444432 2333 677776444
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
...|+-++. + - +-..++..++.|-+.-.+. .+... ....+++.+..|.+|++|+ -.++.+ ++++
T Consensus 159 TVHGVEf~~--~-P---~~~~~~~vlVaDmSSnflS---rpvDv--sk~gvi~aGAQKN~G~aG~--Tvvivr---~dll 222 (370)
T KOG2790|consen 159 TVHGVEFDF--I-P---VNDPKGAVLVADMSSNFLS---RPVDV--SKFGVIFAGAQKNVGPAGV--TVVIVR---KDLL 222 (370)
T ss_pred eeeceecCC--C-C---CCCCCCceEEEecccchhc---CCccc--hhcceEEeccccccCcccc--EEEEEe---hhhh
Confidence 455776541 1 1 1124688888887755332 12222 2344778889999987764 444555 4554
Q ss_pred HHHHHhhc------------cCCcCccHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHHhccCCCCcc--cCC--
Q 015768 255 TQLLKVQD------------NIPICASIISQHLALYSLQT--GPEWVTERVKDLVRNREIIREALSPLGEGAV--KGG-- 316 (400)
Q Consensus 255 ~~l~~~~~------------~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~-- 316 (400)
.....+.. +...+++.+.++++...++. ....+..+.+.-.+....+.+.+....++.. +.|
T Consensus 223 g~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~ 302 (370)
T KOG2790|consen 223 GNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSV 302 (370)
T ss_pred cccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhh
Confidence 44332211 12234565666555554442 1123566666667778888999987644222 222
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.+-+-+.+++..... .+++.....+++=+-+. |. ..-+.+|-|+-. ++-++.+.+++-++++.+.
T Consensus 303 RS~MNV~Fri~~d~L-e~eFLkeA~~~~mv~LK-Gh--RSVGGiRASlYNAisv~~~q~L~~~m~~F~k~ 368 (370)
T KOG2790|consen 303 RSRMNVPFRIEKDEL-EAEFLKEAAKEHMVQLK-GH--RSVGGIRASLYNAISVEEVQKLAAFMKEFQKK 368 (370)
T ss_pred hhhcccceeecchHH-HHHHHHHHHHhhhhccc-cc--cccccchhhhhccccHHHHHHHHHHHHHHHHh
Confidence 334666777764332 33455444433333333 22 245789999877 8888888777777666543
No 395
>PLN02672 methionine S-methyltransferase
Probab=97.53 E-value=0.0033 Score=65.80 Aligned_cols=242 Identities=11% Similarity=0.069 Sum_probs=146.9
Q ss_pred HHHHHHHHHhcC----CCeEEcCCCCCCC-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CC
Q 015768 18 IMVQIQELVRGA----KNAVSLAQGVVYW-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KS 90 (400)
Q Consensus 18 ~~~~~~~~~~~~----~~~i~~~~~~~~~-~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~ 90 (400)
....+.+++.+| +..+|++-.+-.. .---+-+..+...+......+|.++.|...+|..++.++...++++ ++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (1082)
T PLN02672 371 QVKTIFKFLKNGFHEVSGSLDLSFEDESVADEKIPFLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPD 450 (1082)
T ss_pred HHHHHHHHHHccchhhhhhccccccccccchhhccHHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCcc
Confidence 344444554443 4455555333221 1112345667788888778899999999999999999999999875 89
Q ss_pred cEEEeCChHHHHHHHHHHhc------CCCCEEEEeCCCccchhHHHHhcC--------cEEEEeccCCCCCCCCCHHHHH
Q 015768 91 SVMVTAGANQAFVNIVLTLC------DAGDSVVMFAPYYFNSYMSFQMTG--------VTHILVGPCSSKTLHPDADWLE 156 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~------~~gd~vlv~~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~e~l~ 156 (400)
+|++.++-..|++.+++.+. ..+.+-.++ .-|...+...| ..+..+ ... . ..+.+.
T Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~----~~~~~~ 520 (1082)
T PLN02672 451 NVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSLAIENATSDSKSDDVITVI-EAP-R----QSDLVI 520 (1082)
T ss_pred ceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHhhhhcccccCccCCeEEEE-eCC-C----cchHHH
Confidence 99999999999999988764 222111111 12333333333 222222 111 1 123455
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc-ccccCCCCccc-------cCCCcEEEEe
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE-YFMYDGRKHCC-------VEGDHVVNLF 228 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~~~~~~~~-------~~~~~~i~~~ 228 (400)
++++.-+ |++|+..-.. +-..+...++.|.+.+++.|.+++.|.+.. .+......... .-+....++.
T Consensus 521 ~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1082)
T PLN02672 521 ELIKKLK-PQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIIC 596 (1082)
T ss_pred HHHHhCC-CeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhh
Confidence 5665433 5777754332 223344558999999999999999998654 22221111100 1134556677
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHH
Q 015768 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHL 275 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 275 (400)
++-|.--.+.+.+.++++-+ +.+.+.+.+.........+.++|+.
T Consensus 597 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 597 GLVKNQVYSDLEVAFVISEN--EAVLKALSKTGEVLEGRTAIISQFY 641 (1082)
T ss_pred hhhhccccccceEEEEecCc--HHHHHHHHHHHHhhccchHHHHHHH
Confidence 78776645899999999886 6677777765544444445555543
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.39 E-value=0.058 Score=52.38 Aligned_cols=268 Identities=15% Similarity=0.145 Sum_probs=146.9
Q ss_pred hhcCCCCCcEEEeCChHHHHHHHHHHhc-CCCCEEEEeCCCccchhHHHHhc----CcEEEEeccCCCCCCCCCHHHHHH
Q 015768 83 QENKLYKSSVMVTAGANQAFVNIVLTLC-DAGDSVVMFAPYYFNSYMSFQMT----GVTHILVGPCSSKTLHPDADWLEK 157 (400)
Q Consensus 83 ~~~~~~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~e~l~~ 157 (400)
...|++-.+.-+..-+|.|-+....+.. .++.+.++...+|+.....++.. |+++... + +++
T Consensus 174 dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~----------~---~~~ 240 (1001)
T KOG2040|consen 174 DLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS----------D---IKE 240 (1001)
T ss_pred hccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec----------C---HHH
Confidence 3346665555555555566666555543 44567999999999988877542 2332222 2 122
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCC
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 237 (400)
.-........+++..|.. .|.+.+ ..++++++++.+.+++.-.---.+..-. .+...+.+|.++|... ||+|
T Consensus 241 ~~~s~~~v~gvlvQYP~t-~G~i~d---~~el~~~a~~~~s~vv~atDLLaLtiLr---pPgefGaDIavGSsQR-FGVP 312 (1001)
T KOG2040|consen 241 ADYSSKDVSGVLVQYPDT-EGSVLD---FDELVELAHANGSLVVMATDLLALTILR---PPGEFGADIAVGSSQR-FGVP 312 (1001)
T ss_pred hhccccceeEEEEEcCCC-CCcccC---HHHHHHHhhccCceEEEeehhhHHHccC---ChhhcCceeeeccccc-cCcc
Confidence 111222257777777765 578888 7777778888887766532211111111 1223567788887544 3322
Q ss_pred ----cceeEEEEcc------------------CCcHHHHHHHHHhhcc---CCcCccHHHHHHHH------HHhcCCcHH
Q 015768 238 ----GWRVGYIAYP------------------SEVEGFATQLLKVQDN---IPICASIISQHLAL------YSLQTGPEW 286 (400)
Q Consensus 238 ----g~~~G~i~~~------------------~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~------~~l~~~~~~ 286 (400)
|.-.|++.+. ...+.+.-.++...+. ---+.|.-...|+. .++-.+.+.
T Consensus 313 lGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~g 392 (1001)
T KOG2040|consen 313 LGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHG 392 (1001)
T ss_pred ccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHH
Confidence 2222222222 0111222122211110 01122222222222 223335567
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768 287 VTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366 (400)
Q Consensus 287 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~ 366 (400)
+++..+++......|..+|+..+. ++..- .+|=.+++.-.. +.+++..+.+ +++|-++.- ..+.+-+++.-
T Consensus 393 L~~IArrvh~~T~~l~~~l~~agh-el~~k--~fFDTLkI~~~~-s~~~~l~rA~-~~~iNlr~~----ed~tigvslDE 463 (1001)
T KOG2040|consen 393 LKEIARRVHNLTLILAEGLKNAGH-ELQHK--PFFDTLKIRCGC-SAEEVLDRAA-KRQINLRLV----EDGTIGVSLDE 463 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcch-hhccc--cccceEEEEecC-cHHHHHHHHH-hhcCceEEe----ecCceEEeecc
Confidence 888888899999999999998763 33322 344444443322 5777777665 667777642 46778888876
Q ss_pred -CCHHHHHHHHHHHH
Q 015768 367 -LVEDDCKAAADRLR 380 (400)
Q Consensus 367 -~~~~~~~~~~~~l~ 380 (400)
.+.+|++.++..+.
T Consensus 464 Tv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 464 TVTEKDVDDLLWVFN 478 (1001)
T ss_pred cccHHHHHHHHHHHc
Confidence 67888888887775
No 397
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=90.65 E-value=12 Score=33.31 Aligned_cols=163 Identities=13% Similarity=0.149 Sum_probs=90.9
Q ss_pred HHHHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCC---
Q 015768 22 IQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG--- 97 (400)
Q Consensus 22 ~~~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g--- 97 (400)
+..+.+.|-|++.++..+++.- --|.++++..+++.++. ....+-+.+.+ +++...++ =++++--
T Consensus 35 ~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~--------~~~~~~~~~~~-~r~~~~~p--~vlm~Y~N~i 103 (263)
T CHL00200 35 LKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGI--------NLNKILSILSE-VNGEIKAP--IVIFTYYNPV 103 (263)
T ss_pred HHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCC--------CHHHHHHHHHH-HhcCCCCC--EEEEecccHH
Confidence 4445677888888888776543 23566667777766531 12333333333 22222322 2333321
Q ss_pred hHHHHHHHHHHhcCCC-CEEEEeCCCccc---hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 98 ANQAFVNIVLTLCDAG-DSVVMFAPYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 98 ~t~a~~~~~~~l~~~g-d~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
-..+++..+.-+.+.| |.|++++-.+.. +...++..|...+.+ +.+. -+.+.++...+... .-|++...
T Consensus 104 ~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~l--v~Pt---T~~eri~~i~~~a~--gFIY~vS~ 176 (263)
T CHL00200 104 LHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILL--IAPT---SSKSRIQKIARAAP--GCIYLVST 176 (263)
T ss_pred HHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEE--ECCC---CCHHHHHHHHHhCC--CcEEEEcC
Confidence 1225566666666667 888888766533 445667788877665 2222 14556666555433 56776655
Q ss_pred CCCCccCCC-HHHHHHHHHHHHHc-CCEEEE
Q 015768 174 GNPSGTYIP-ERLLKRISDLCKAA-GSWLVV 202 (400)
Q Consensus 174 ~nptG~~~~-~~~l~~i~~l~~~~-~~~li~ 202 (400)
...||.--. .+++.++.+.++++ +.++.+
T Consensus 177 ~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 177 TGVTGLKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred CCCCCCCccccHHHHHHHHHHHHhcCCCEEE
Confidence 567777422 24577777777655 555554
No 398
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=90.44 E-value=12 Score=33.11 Aligned_cols=164 Identities=14% Similarity=0.098 Sum_probs=86.3
Q ss_pred HHHHHhcCCCeEEcCCCCCCCCC-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh-cCCCCCcEEEeCC-h
Q 015768 22 IQELVRGAKNAVSLAQGVVYWQP-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE-NKLYKSSVMVTAG-A 98 (400)
Q Consensus 22 ~~~~~~~~~~~i~~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~-~~~~~~~i~~~~g-~ 98 (400)
+..+.++|-++|.++..+++.-. -|-++++..+++.++. ....+.+.+.+ +++. .+++-......+- -
T Consensus 30 ~~~l~~~Gad~iElGiPfsDP~aDGpvIq~a~~~al~~G~--------~~~~~~~~v~~-ir~~~~~~plv~m~Y~Npi~ 100 (256)
T TIGR00262 30 IKTLIEAGADALELGVPFSDPLADGPTIQAADLRALRAGM--------TPEKCFELLKK-VRQKHPNIPIGLLTYYNLIF 100 (256)
T ss_pred HHHHHHcCCCEEEECCCCCCCCCcCHHHHHHHHHHHHcCC--------CHHHHHHHHHH-HHhcCCCCCEEEEEeccHHh
Confidence 44456788999999998766533 3566667777776542 12233333333 2222 2444332222232 1
Q ss_pred HHHHHHHHHHhcCCC-CEEEEeCCCcc---chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 99 NQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 99 t~a~~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
..++...+..+.+.| |.|++++-.+. .+...++..|...+.+ +.+. .+.+.++...+... ..|++...+
T Consensus 101 ~~G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~l--v~P~---T~~eri~~i~~~~~--gfiy~vs~~ 173 (256)
T TIGR00262 101 RKGVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFL--VAPN---ADDERLKQIAEKSQ--GFVYLVSRA 173 (256)
T ss_pred hhhHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEE--ECCC---CCHHHHHHHHHhCC--CCEEEEECC
Confidence 335566666676666 77777765542 2335557788876644 2222 14566666655432 455655445
Q ss_pred CCCccC--CCHHHHHHHHHHHHHc-CCEEEE
Q 015768 175 NPSGTY--IPERLLKRISDLCKAA-GSWLVV 202 (400)
Q Consensus 175 nptG~~--~~~~~l~~i~~l~~~~-~~~li~ 202 (400)
.-||.. ++.+ +.+..+.++++ +..+++
T Consensus 174 G~TG~~~~~~~~-~~~~i~~lr~~~~~pi~v 203 (256)
T TIGR00262 174 GVTGARNRAASA-LNELVKRLKAYSAKPVLV 203 (256)
T ss_pred CCCCCcccCChh-HHHHHHHHHhhcCCCEEE
Confidence 667763 4433 44444444433 444444
No 399
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=88.69 E-value=16 Score=32.20 Aligned_cols=156 Identities=12% Similarity=0.065 Sum_probs=84.7
Q ss_pred HHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEe---CChH
Q 015768 24 ELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVT---AGAN 99 (400)
Q Consensus 24 ~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~---~g~t 99 (400)
-+.+.|-|.+.++..+++.- --|.++++..+++.++. . .+..-+.+.+. .+. +.+..-++++ +--.
T Consensus 39 ~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g~-----t---~~~~lel~~~~-r~~-~~~~Pivlm~Y~Npi~~ 108 (265)
T COG0159 39 TLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAGV-----T---LEDTLELVEEI-RAK-GVKVPIVLMTYYNPIFN 108 (265)
T ss_pred HHHhCCCCEEEecCCCCCcCccCHHHHHHHHHHHHCCC-----C---HHHHHHHHHHH-Hhc-CCCCCEEEEEeccHHHH
Confidence 34677888888888775542 23566666677766532 1 12222222222 111 2222234443 2234
Q ss_pred HHHHHHHHHhcCCC-CEEEEeCCCc---cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768 100 QAFVNIVLTLCDAG-DSVVMFAPYY---FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (400)
Q Consensus 100 ~a~~~~~~~l~~~g-d~vlv~~p~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n 175 (400)
.++...+..+.+.| |.+++++--. ..+...++..|+..+++.+ +. .+-+.+++..+... .-++....+-
T Consensus 109 ~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lva--Pt---t~~~rl~~i~~~a~--GFiY~vs~~G 181 (265)
T COG0159 109 YGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVA--PT---TPDERLKKIAEAAS--GFIYYVSRMG 181 (265)
T ss_pred hhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeC--CC---CCHHHHHHHHHhCC--CcEEEEeccc
Confidence 55666566666666 8888876554 2255666778888777611 11 13455555554333 5666666667
Q ss_pred CCccCCC-HHHHHHHHHHHHHc
Q 015768 176 PSGTYIP-ERLLKRISDLCKAA 196 (400)
Q Consensus 176 ptG~~~~-~~~l~~i~~l~~~~ 196 (400)
-||.-.+ ...+.++.+..+++
T Consensus 182 vTG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 182 VTGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred ccCCCcccchhHHHHHHHHHHh
Confidence 7887655 22356666666654
No 400
>PLN02591 tryptophan synthase
Probab=83.71 E-value=30 Score=30.46 Aligned_cols=163 Identities=11% Similarity=0.076 Sum_probs=96.3
Q ss_pred HHHHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC-C--
Q 015768 22 IQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA-G-- 97 (400)
Q Consensus 22 ~~~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~-g-- 97 (400)
+..+.++|-|++.++..+++.- --|-++++..+++.++. ....+.+.+.+ +++...++ =++++- +
T Consensus 22 ~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~--------~~~~~~~~~~~-~r~~~~~p--~ilm~Y~N~i 90 (250)
T PLN02591 22 LRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGT--------TLDSVISMLKE-VAPQLSCP--IVLFTYYNPI 90 (250)
T ss_pred HHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCC--------CHHHHHHHHHH-HhcCCCCC--EEEEecccHH
Confidence 4445688899999999886653 33666667777776542 12334444433 22222222 234432 1
Q ss_pred hHHHHHHHHHHhcCCC-CEEEEeCCCcc---chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 98 ANQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 98 ~t~a~~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
-..+++..+..+.+.| |.+++++-.+. .+...++..|+..+.+ +.+. .+.+.++...+..+ ..|++..-
T Consensus 91 ~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~l--v~Pt---t~~~ri~~ia~~~~--gFIY~Vs~ 163 (250)
T PLN02591 91 LKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLL--TTPT---TPTERMKAIAEASE--GFVYLVSS 163 (250)
T ss_pred HHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEE--eCCC---CCHHHHHHHHHhCC--CcEEEeeC
Confidence 1236667777777777 89999987763 3445667889887776 2111 13445565554433 67777665
Q ss_pred CCCCccCCC-HHHHHHHHHHHHHc-CCEEEE
Q 015768 174 GNPSGTYIP-ERLLKRISDLCKAA-GSWLVV 202 (400)
Q Consensus 174 ~nptG~~~~-~~~l~~i~~l~~~~-~~~li~ 202 (400)
...||..-. .+.+.++.+.++++ ++++++
T Consensus 164 ~GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 164 TGVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred CCCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 667776422 45677766666664 666664
No 401
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=83.39 E-value=17 Score=31.04 Aligned_cols=101 Identities=15% Similarity=0.255 Sum_probs=64.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCE-------------EEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHH
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDS-------------VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~-------------vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~ 157 (400)
-+.+.+||-.++.++..++...-+. .....|......-.++.+|..++.. ..+.. ..-..++|.+
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~-~~~g~-~e~eve~L~~ 80 (223)
T COG2102 3 VIALYSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTF-DTSGE-EEREVEELKE 80 (223)
T ss_pred EEEEEecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEE-ecCcc-chhhHHHHHH
Confidence 3678899999988777776532221 1111111111223456778887777 54431 1225778888
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
.+..-. ...|+ +|.+.+.....++-.+|++-|+..+
T Consensus 81 ~l~~l~-~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 81 ALRRLK-VDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHhCc-ccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 776432 34555 7999999999999999999987765
No 402
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=82.66 E-value=18 Score=31.27 Aligned_cols=91 Identities=25% Similarity=0.189 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhcCCCCEE-EEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 98 ANQAFVNIVLTLCDAGDSV-VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 98 ~t~a~~~~~~~l~~~gd~v-lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
|..+ ..++.+|.+++-.| ++..+.-......++..|++++.. +.+ |.+.|.+.++.- ..|++..+...
T Consensus 8 G~~G-~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~-d~~------~~~~l~~al~g~---d~v~~~~~~~~ 76 (233)
T PF05368_consen 8 GNQG-RSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEA-DYD------DPESLVAALKGV---DAVFSVTPPSH 76 (233)
T ss_dssp SHHH-HHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES--TT-------HHHHHHHHTTC---SEEEEESSCSC
T ss_pred cHHH-HHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeec-ccC------CHHHHHHHHcCC---ceEEeecCcch
Confidence 4444 33444444456443 445544333445677889998765 332 788999999854 34454433222
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
....+....+++.|++.|+..++
T Consensus 77 ---~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 77 ---PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp ---CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred ---hhhhhhhhhHHHhhhccccceEE
Confidence 23445578888888888876664
No 403
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=81.23 E-value=15 Score=33.30 Aligned_cols=61 Identities=18% Similarity=0.274 Sum_probs=39.8
Q ss_pred CCCCCCHHHHHHhhc---c-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 146 KTLHPDADWLEKTLE---T-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~---~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
.|..++.++++..++ . -....+|+++ .+=|.| ++.+...++.++|++.|+.+++|.....+
T Consensus 107 ~Gp~is~~~~~~~l~~~~~~l~~~d~Vvls-GSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 107 PGPEISEAELEQFLEQLKALLESDDIVVLS-GSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred CCCCCCHHHHHHHHHHHHHhcccCCEEEEe-CCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 355566666666544 2 1112445444 455555 45667999999999999999999886533
No 404
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=71.41 E-value=66 Score=29.10 Aligned_cols=103 Identities=12% Similarity=0.143 Sum_probs=61.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEe--CCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 88 YKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMF--APYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 88 ~~~~i~~~~g~t~a~~~~~~~l~~~gd--~vlv~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
...++++|.+-+.+...++....+.|. +|+|. .|.+.+.. ..++..|+++..+ + |. ..-..++.
T Consensus 118 ~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I-~--------Ds-a~~~~~~~ 187 (301)
T COG1184 118 HDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVI-V--------DS-AVGAFMSR 187 (301)
T ss_pred cCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEE-e--------ch-HHHHHHHh
Confidence 467899998888888888888877775 45554 45565433 5677889887776 2 11 12222332
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
-+ ++++=...--.-|.+.++----.|+..|+++++++++
T Consensus 188 vd--~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 188 VD--KVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred CC--EEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 22 3332112212234444444456678888999998876
No 405
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=68.21 E-value=1.2e+02 Score=29.40 Aligned_cols=85 Identities=15% Similarity=0.242 Sum_probs=48.0
Q ss_pred EEEeCCCccchh-HHHHhcCcEEEEecc--CCCCC---CCCCHHHHHHhhc----cCCCCeEEEEe-CCCCCCccCCCHH
Q 015768 116 VVMFAPYYFNSY-MSFQMTGVTHILVGP--CSSKT---LHPDADWLEKTLE----TKPTPKLVSVV-NPGNPSGTYIPER 184 (400)
Q Consensus 116 vlv~~p~~~~~~-~~~~~~g~~~~~~~~--~~~~~---~~~~~e~l~~~l~----~~~~~~~v~l~-~p~nptG~~~~~~ 184 (400)
+.+....|.... -..+..|+....+.| -.++| ..+|...+++.+. .++. -++++. -.....|..--
T Consensus 234 ~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkk-PLilia~iGasi~GqnDm-- 310 (838)
T KOG0630|consen 234 FYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKK-PLILIADIGASICGQNDM-- 310 (838)
T ss_pred EEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCC-CeEEEEeccchhhcchHH--
Confidence 344444443333 344667864332223 22333 3678888888886 2221 233333 33455566544
Q ss_pred HHHHHHHHHHHcC-CEEEEcc
Q 015768 185 LLKRISDLCKAAG-SWLVVDN 204 (400)
Q Consensus 185 ~l~~i~~l~~~~~-~~li~D~ 204 (400)
+.+|.++|++|+ .|++.-.
T Consensus 311 -i~kildi~eahakfWLHasG 330 (838)
T KOG0630|consen 311 -ILKILDICEAHAKFWLHASG 330 (838)
T ss_pred -HHHHHHHHHHhhheeEeecc
Confidence 999999999997 7877644
No 406
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=68.20 E-value=87 Score=27.77 Aligned_cols=163 Identities=9% Similarity=0.049 Sum_probs=91.4
Q ss_pred HHHHHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH
Q 015768 21 QIQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN 99 (400)
Q Consensus 21 ~~~~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t 99 (400)
-+..+.+.|-|++.++..+++.- --|-++++..+++.++. ....+-+.+.+.=.+... -.+++.+-..
T Consensus 29 ~~~~l~~~GaD~iEiGiPfSDP~ADGpvIq~A~~rAL~~G~--------~~~~~~~~~~~ir~~~~~---~pivlm~Y~N 97 (259)
T PF00290_consen 29 ILKALEEAGADIIEIGIPFSDPVADGPVIQKASQRALKNGF--------TLEKIFELVKEIRKKEPD---IPIVLMTYYN 97 (259)
T ss_dssp HHHHHHHTTBSSEEEE--SSSCTTSSHHHHHHHHHHHHTT----------HHHHHHHHHHHHHHCTS---SEEEEEE-HH
T ss_pred HHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCC--------CHHHHHHHHHHHhccCCC---CCEEEEeecc
Confidence 33444566899999998876543 33666677788877642 133344433332112212 2244443332
Q ss_pred ----HHHHHHHHHhcCCC-CEEEEeCCCcc---chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe
Q 015768 100 ----QAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (400)
Q Consensus 100 ----~a~~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~ 171 (400)
.+++..+..+.+.| |.+++++--+. .+...++..|+..+.+ +.+. .+.+.++...+... .-|++.
T Consensus 98 ~i~~~G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~l--v~p~---t~~~Ri~~i~~~a~--gFiY~v 170 (259)
T PF00290_consen 98 PIFQYGIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPL--VAPT---TPEERIKKIAKQAS--GFIYLV 170 (259)
T ss_dssp HHHHH-HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEE--EETT---S-HHHHHHHHHH-S--SEEEEE
T ss_pred HHhccchHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEE--ECCC---CCHHHHHHHHHhCC--cEEEee
Confidence 23455555565556 88999886653 3456667889887776 2111 24566666655444 788887
Q ss_pred CCCCCCccCCC-HHHHHHHHHHHHHc-CCEEE
Q 015768 172 NPGNPSGTYIP-ERLLKRISDLCKAA-GSWLV 201 (400)
Q Consensus 172 ~p~nptG~~~~-~~~l~~i~~l~~~~-~~~li 201 (400)
.-...||...+ ..++.+..+.++++ +.+++
T Consensus 171 s~~GvTG~~~~~~~~l~~~i~~ik~~~~~Pv~ 202 (259)
T PF00290_consen 171 SRMGVTGSRTELPDELKEFIKRIKKHTDLPVA 202 (259)
T ss_dssp SSSSSSSTTSSCHHHHHHHHHHHHHTTSS-EE
T ss_pred ccCCCCCCcccchHHHHHHHHHHHhhcCcceE
Confidence 77778888643 45678888877766 34444
No 407
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=67.88 E-value=57 Score=30.34 Aligned_cols=109 Identities=11% Similarity=0.072 Sum_probs=61.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEE--EEeCCCccc------hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 89 KSSVMVTAGANQAFVNIVLTLCDAGDSV--VMFAPYYFN------SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 89 ~~~i~~~~g~t~a~~~~~~~l~~~gd~v--lv~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
.+-++..|||-.+...+..+...-|..+ +..++.+.. ....++.+|+....+ .. +.+.+.....
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i-~~-------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTI-TI-------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEE-eC-------CHHHHHHHHH
Confidence 5677888998887777644422234333 344555542 334556688887776 32 4444444332
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC
Q 015768 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213 (400)
Q Consensus 161 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~ 213 (400)
..- + +..+|...+ .......+.++++++|+.+|+......-.++|
T Consensus 132 ~~~--~-----~~~~pc~~c-~~~~~~~l~~~A~~~gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 132 AYF--K-----KVGDPEWPQ-DHAIFASVYQVALKFNIPLIIWGENIAEEYGG 176 (343)
T ss_pred HHH--h-----ccCCCchhh-hhHHHHHHHHHHHHhCCCEEEeCCCHHHhcCC
Confidence 110 1 122332222 12235677888999999999988776544444
No 408
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=66.58 E-value=53 Score=30.20 Aligned_cols=74 Identities=12% Similarity=0.070 Sum_probs=49.7
Q ss_pred CCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015768 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (400)
Q Consensus 121 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (400)
-.|.++.+.++...++++++ +... ....+.+-.++... |.|++.-| .+++.++.++|.+.|+++| .+
T Consensus 59 k~y~syEeLakd~~vDvVyi-~~~~---~qH~evv~l~l~~~---K~VL~EKP-----la~n~~e~~~iveaA~~rg-v~ 125 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYI-STPN---PQHYEVVMLALNKG---KHVLCEKP-----LAMNVAEAEEIVEAAEARG-VF 125 (351)
T ss_pred ccccCHHHHhcCCCcCEEEe-CCCC---ccHHHHHHHHHHcC---CcEEeccc-----ccCCHHHHHHHHHHHHHcC-cE
Confidence 44677888888888999988 4321 11344444445443 56776644 3567889999999999988 55
Q ss_pred EEccccc
Q 015768 201 VVDNTYE 207 (400)
Q Consensus 201 i~D~a~~ 207 (400)
+.|..+.
T Consensus 126 ~meg~~~ 132 (351)
T KOG2741|consen 126 FMEGLWW 132 (351)
T ss_pred EEeeeee
Confidence 5566655
No 409
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=66.30 E-value=91 Score=27.30 Aligned_cols=145 Identities=11% Similarity=0.052 Sum_probs=73.8
Q ss_pred chHHHHHHHHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEE
Q 015768 16 MPIMVQIQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMV 94 (400)
Q Consensus 16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~ 94 (400)
...+.++.+.+++.-+.+.++...++.. --+.+.++..+++.++. .++.+++.+. .+++- +++
T Consensus 17 ~~~~~~~~~~l~~~ad~iElgip~sdp~adG~~i~~~~~~a~~~g~----------~~~v~~vr~~----~~~Pl--~lM 80 (244)
T PRK13125 17 VESFKEFIIGLVELVDILELGIPPKYPKYDGPVIRKSHRKVKGLDI----------WPLLEEVRKD----VSVPI--ILM 80 (244)
T ss_pred HHHHHHHHHHHHhhCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCc----------HHHHHHHhcc----CCCCE--EEE
Confidence 3445555555544477888877654442 23555555555554321 2233333322 23321 222
Q ss_pred e--CChHHHHHHHHHHhcCCC-CEEEEeCCCc------cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768 95 T--AGANQAFVNIVLTLCDAG-DSVVMFAPYY------FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (400)
Q Consensus 95 ~--~g~t~a~~~~~~~l~~~g-d~vlv~~p~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~ 165 (400)
+ +-........+..+.+.| |.|++++-.+ ..+...++..|.++... +.+. -+.+.++..++...
T Consensus 81 ~y~n~~~~~~~~~i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~--v~p~---T~~e~l~~~~~~~~-- 153 (244)
T PRK13125 81 TYLEDYVDSLDNFLNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFF--TSPK---FPDLLIHRLSKLSP-- 153 (244)
T ss_pred EecchhhhCHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEE--ECCC---CCHHHHHHHHHhCC--
Confidence 2 222334455555555556 7787764221 12445668889876654 3222 25677777776544
Q ss_pred eEEEEeCCCCCCccCCCHH
Q 015768 166 KLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~~~~ 184 (400)
..+++ ..++-+|..++.+
T Consensus 154 ~~l~m-sv~~~~g~~~~~~ 171 (244)
T PRK13125 154 LFIYY-GLRPATGVPLPVS 171 (244)
T ss_pred CEEEE-EeCCCCCCCchHH
Confidence 56665 3445556655443
No 410
>smart00642 Aamy Alpha-amylase domain.
Probab=63.54 E-value=25 Score=28.78 Aligned_cols=28 Identities=18% Similarity=0.176 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
+.++++++++.|+++|+.+|.|-+....
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4688999999999999999999987643
No 411
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=63.32 E-value=27 Score=26.31 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=43.3
Q ss_pred CccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
.|.++.+.+.....+.+.+ ..... ...+.+..+++.+ +-|++.-|- ..+.++.++|.++++++|..+.
T Consensus 50 ~~~~~~~ll~~~~~D~V~I-~tp~~---~h~~~~~~~l~~g---~~v~~EKP~-----~~~~~~~~~l~~~a~~~~~~~~ 117 (120)
T PF01408_consen 50 VYTDLEELLADEDVDAVII-ATPPS---SHAEIAKKALEAG---KHVLVEKPL-----ALTLEEAEELVEAAKEKGVKVM 117 (120)
T ss_dssp EESSHHHHHHHTTESEEEE-ESSGG---GHHHHHHHHHHTT---SEEEEESSS-----SSSHHHHHHHHHHHHHHTSCEE
T ss_pred chhHHHHHHHhhcCCEEEE-ecCCc---chHHHHHHHHHcC---CEEEEEcCC-----cCCHHHHHHHHHHHHHhCCEEE
Confidence 3445566666666666666 33222 2455556666543 466766552 2478889999999999988876
Q ss_pred E
Q 015768 202 V 202 (400)
Q Consensus 202 ~ 202 (400)
+
T Consensus 118 V 118 (120)
T PF01408_consen 118 V 118 (120)
T ss_dssp E
T ss_pred E
Confidence 5
No 412
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=59.13 E-value=1.2e+02 Score=26.44 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=59.5
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCccchh----HHHHhcCcEEEEeccCCC-CC---CCCCHHHHHHhhc--cCCCC
Q 015768 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY----MSFQMTGVTHILVGPCSS-KT---LHPDADWLEKTLE--TKPTP 165 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~-~~---~~~~~e~l~~~l~--~~~~~ 165 (400)
.++..|+..+++++- -.+|-+..|+-.... ..++..|++++.+...+. ++ ..++.+.+.+.+. ..+.+
T Consensus 105 tt~~~A~~~AL~alg--~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~a 182 (239)
T TIGR02990 105 VTPSSAAVDGLAALG--VRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDA 182 (239)
T ss_pred eCHHHHHHHHHHHcC--CCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCC
Confidence 345577888888882 268888888554333 456778998876522221 11 2467888888776 23446
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
.+|+++.-+-++ +.-|-++=++.|.+++.
T Consensus 183 DAifisCTnLrt--------~~vi~~lE~~lGkPVls 211 (239)
T TIGR02990 183 DALFLSCTALRA--------ATCAQRIEQAIGKPVVT 211 (239)
T ss_pred CEEEEeCCCchh--------HHHHHHHHHHHCCCEEE
Confidence 888887433333 44444444577888864
No 413
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=58.43 E-value=1.7e+02 Score=27.98 Aligned_cols=109 Identities=16% Similarity=0.156 Sum_probs=66.8
Q ss_pred HHHHHHHhhcC-CCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHH
Q 015768 76 ALVKKLNQENK-LYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDAD 153 (400)
Q Consensus 76 ~~a~~l~~~~~-~~~~~i~~~~g~t~a~~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e 153 (400)
+..+...+.++ ++...+++...| +....+...|.+.| ..|.+.+-++......++..|++++. ++
T Consensus 164 aAv~lA~~~~~~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~------------l~ 230 (414)
T COG0373 164 AAVELAKRIFGSLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA------------LE 230 (414)
T ss_pred HHHHHHHHHhcccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec------------HH
Confidence 34444444445 455556665544 77788888888877 89999999998888888888866543 34
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccc
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNT 205 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a 205 (400)
++...+.+. .+|+.+ .+.|+ .+++.+.++..... +++ ++++|=+
T Consensus 231 el~~~l~~~---DvViss-Tsa~~-~ii~~~~ve~a~~~--r~~-~livDia 274 (414)
T COG0373 231 ELLEALAEA---DVVISS-TSAPH-PIITREMVERALKI--RKR-LLIVDIA 274 (414)
T ss_pred HHHHhhhhC---CEEEEe-cCCCc-cccCHHHHHHHHhc--ccC-eEEEEec
Confidence 556666543 344433 22222 34665556555542 233 7888754
No 414
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=56.01 E-value=1.3e+02 Score=27.25 Aligned_cols=101 Identities=13% Similarity=0.212 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhh---cC-CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccc--hhHHHHhcCcEEEEeccCCC
Q 015768 73 LRDALVKKLNQE---NK-LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSS 145 (400)
Q Consensus 73 ~~~~~a~~l~~~---~~-~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~ 145 (400)
+.++++.++-+. .| +++. .|+=.++++-++-.++-+-.+ |-++++.-|.-.+ ....++.+|++++.+ |..+
T Consensus 41 vKDR~A~~mI~~Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t-~~~~ 118 (300)
T COG0031 41 VKDRIALYMIEDAEKRGLLKPGGTIVEATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILT-PGAP 118 (300)
T ss_pred hhHHHHHHHHHHHHHcCCCCCCCEEEEcCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEc-CCCC
Confidence 444555554222 23 5554 455567788888888877654 6555444444333 447889999999988 6632
Q ss_pred CCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
....--.+.++++....+ -.+++.....||
T Consensus 119 g~~~~a~~~a~el~~~~p-~~~~~~~Qf~Np 148 (300)
T COG0031 119 GNMKGAIERAKELAAEIP-GYAVWLNQFENP 148 (300)
T ss_pred CchHHHHHHHHHHHHhCC-CceEchhhcCCC
Confidence 212112333333444443 136665433343
No 415
>PRK10595 SOS cell division inhibitor; Provisional
Probab=55.54 E-value=1.1e+02 Score=24.88 Aligned_cols=84 Identities=15% Similarity=0.080 Sum_probs=53.7
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
+...+.-|+...|-+..+...+...|+ +++.+.+.++. -.+...|++|+.+. ...++....+ -.+.+.
T Consensus 52 l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~---d~Lwa~EqaLrsG~--~~aVL~Wlp~----~l~~~~ 122 (164)
T PRK10595 52 LGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPC---HTVEAMERALRTGN--YSVVLGWLPD----ELTEEE 122 (164)
T ss_pred HhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcH---HHHHHHHHHHhhCC--CcEEEECCcc----cCCHHH
Confidence 344556787888888888899999997 45555233222 14677888888665 5555565321 246677
Q ss_pred HHHHHHHHHHcCCEEE
Q 015768 186 LKRISDLCKAAGSWLV 201 (400)
Q Consensus 186 l~~i~~l~~~~~~~li 201 (400)
+++|--.+++-+.+.+
T Consensus 123 ~RRLQlAAe~g~~l~f 138 (164)
T PRK10595 123 HARLVDAAQEGNAMGF 138 (164)
T ss_pred HHHHHHHHHhCCCEEE
Confidence 8887776766555433
No 416
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=54.92 E-value=18 Score=36.24 Aligned_cols=36 Identities=25% Similarity=0.276 Sum_probs=30.7
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC
Q 015768 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR 214 (400)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~ 214 (400)
..-++++++++++.|+++||-||+|=++..|..++.
T Consensus 209 ryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 209 RYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 345788899999999999999999999998776543
No 417
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=54.57 E-value=57 Score=29.51 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=44.0
Q ss_pred EEeCCCccchhHHHHh--cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015768 117 VMFAPYYFNSYMSFQM--TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194 (400)
Q Consensus 117 lv~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~ 194 (400)
+..-|+|++..++... -..-++.+ |.. .-++.++++...+. |.+++..... +.++-++|.++++
T Consensus 48 v~G~~~y~sv~dlp~~~~~DlAvi~v-p~~-----~v~~~l~e~~~~gv--k~avI~s~Gf------~~~~~~~l~~~a~ 113 (291)
T PRK05678 48 VLGLPVFNTVAEAVEATGANASVIYV-PPP-----FAADAILEAIDAGI--DLIVCITEGI------PVLDMLEVKAYLE 113 (291)
T ss_pred EeCeeccCCHHHHhhccCCCEEEEEc-CHH-----HHHHHHHHHHHCCC--CEEEEECCCC------CHHHHHHHHHHHH
Confidence 3455667777766654 34444444 321 23567777766543 5554443222 2444568999999
Q ss_pred HcCCEEEEcccc
Q 015768 195 AAGSWLVVDNTY 206 (400)
Q Consensus 195 ~~~~~li~D~a~ 206 (400)
++|+.++==++.
T Consensus 114 ~~girvlGPNc~ 125 (291)
T PRK05678 114 RKKTRLIGPNCP 125 (291)
T ss_pred HcCCEEECCCCC
Confidence 999998843333
No 418
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=54.49 E-value=1.2e+02 Score=24.83 Aligned_cols=83 Identities=12% Similarity=0.055 Sum_probs=53.3
Q ss_pred hcCCCCEEEEeCCCccchhHHHHhcCcE---EEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC-CCCCCccCCCHH
Q 015768 109 LCDAGDSVVMFAPYYFNSYMSFQMTGVT---HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-PGNPSGTYIPER 184 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~-p~nptG~~~~~~ 184 (400)
+...+.-|+...|-+......++..|++ ++.+.+.++.+ .++..|++|+.+. ...+++. |+. .+.+
T Consensus 56 Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d---~lwa~EQaLrSG~--c~aVL~WLp~~-----l~~~ 125 (168)
T TIGR00623 56 LGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCN---TVESMIRALRTGN--YSVVIGWLTDE-----LTEE 125 (168)
T ss_pred hcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchh---HHHHHHHHHHhCC--CcEEEecCCcc-----CCHH
Confidence 3445566777777777888888999973 54552333222 5788899998766 6666665 422 5667
Q ss_pred HHHHHHHHHHHcCCEEE
Q 015768 185 LLKRISDLCKAAGSWLV 201 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li 201 (400)
.+++|--.++.-+.+.+
T Consensus 126 ~lRRLqlAA~~G~al~f 142 (168)
T TIGR00623 126 EHAKLVRAAEEGNAMGF 142 (168)
T ss_pred HHHHHHHHHHhCCCeEE
Confidence 77777766665554433
No 419
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=54.37 E-value=1.4e+02 Score=25.43 Aligned_cols=96 Identities=24% Similarity=0.271 Sum_probs=54.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCe
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPK 166 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~ 166 (400)
++...+++..||..|...+ ..|.+.|-.|.+.+|....-...+...| ++..+ .- .+ ..+.+ . . ..
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~-~~---~~--~~~dl----~-~--~~ 71 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWL-AR---CF--DADIL----E-G--AF 71 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEE-eC---CC--CHHHh----C-C--cE
Confidence 4456788898988886665 4555567777777776544333333334 34433 11 11 22222 1 1 24
Q ss_pred EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE-Eccc
Q 015768 167 LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV-VDNT 205 (400)
Q Consensus 167 ~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li-~D~a 205 (400)
+|+ ..++++ +--..+.+.|++.++++- +|+.
T Consensus 72 lVi-~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 72 LVI-AATDDE-------ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EEE-ECCCCH-------HHHHHHHHHHHHcCCEEEECCCc
Confidence 444 334332 224678889999998873 4443
No 420
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=53.71 E-value=1.4e+02 Score=25.39 Aligned_cols=104 Identities=11% Similarity=0.106 Sum_probs=51.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC--CCCCCCHHHHHHhhccCCCCeEE
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS--KTLHPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~e~l~~~l~~~~~~~~v 168 (400)
.|-+.+.-..-+.-.+.-+ ..+-|.|....-.-...++.. ++++..- |... ++ .++++.+.+....+ -+|
T Consensus 62 gv~i~~~np~~l~~~V~k~--~~~vv~V~GGd~~vNR~AvE~-~VDVL~~-P~~~Rkd~---g~dHVLAKlAa~n~-VAI 133 (216)
T PRK03892 62 AILLVTPKPSLIREVKQRF--LNYLIYVQGGDLRVNRYAIER-GVDAIIS-PWVGRKDP---GIDHVLARMAAKRG-VAI 133 (216)
T ss_pred eEEEecCCHHHHHHHHHhc--cceEEEEECCcHHHHHHHHhc-ccceeec-ccccCcCC---CccHHHHHHHHHcC-eEE
Confidence 4444444334444444444 344444443332112223333 6665544 4432 22 34566555553321 333
Q ss_pred EEe-CC---CCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 169 SVV-NP---GNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 169 ~l~-~p---~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
=++ .| +++.-..--...++++.+++++|++++++
T Consensus 134 e~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VI 171 (216)
T PRK03892 134 GFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFI 171 (216)
T ss_pred EEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 333 33 34444555566788999999999988876
No 421
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=52.45 E-value=68 Score=24.74 Aligned_cols=47 Identities=23% Similarity=0.438 Sum_probs=32.9
Q ss_pred CCCHHHHHHhhccCCCCeEEEEe--CC---CCCCccCCCHHHHHHHHHHHHHcC
Q 015768 149 HPDADWLEKTLETKPTPKLVSVV--NP---GNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 149 ~~~~e~l~~~l~~~~~~~~v~l~--~p---~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
.++++.+..++.... ..|++. .| ++..|.....+.+..+.++..+.|
T Consensus 39 rv~~~~il~Af~~GA--DGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 39 RVDPEFILRAFEKGA--DGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred ccCHHHHHHHHHcCC--CEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 689999999998665 555553 33 557787777777777777666554
No 422
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=51.78 E-value=1.2e+02 Score=26.18 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=54.4
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEE--E--EeCC-C---ccc-----hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768 92 VMVTAGANQAFVNIVLTLCDAGDSV--V--MFAP-Y---YFN-----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~~~gd~v--l--v~~p-~---~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~ 158 (400)
+++.|||-.+..++.+++.+ .+.+ + ++.. . |++ ....++.+|+..+.+ +.+.+. .--.+++.+.
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~-~~~g~~-~~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEI-PTSGDE-EDYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEE-EE---C-CCHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEE-EccCcc-chhhHHHHHH
Confidence 56778988888888888766 4322 1 1111 1 112 224557788877766 554221 1135777777
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 159 l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
++.-. +.+++ +|.+.+.+....+-++|.+.|+..+
T Consensus 81 l~~~~-v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 81 LKELK-VEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HCTC---SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHcC-CCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 76443 45555 7899888888888899999887765
No 423
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=50.78 E-value=99 Score=27.23 Aligned_cols=94 Identities=16% Similarity=0.073 Sum_probs=57.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCC-CHHHHHHhhccCCCCeEE
Q 015768 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP-DADWLEKTLETKPTPKLV 168 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~e~l~~~l~~~~~~~~v 168 (400)
..|++..|++++-..+-.. .+.|..++++.-+-.+- ....+..+..- .+ +.+.+++.+..+. +++|
T Consensus 3 ~~IlvlgGT~egr~la~~L-~~~g~~v~~Svat~~g~---~~~~~~~v~~G--------~l~~~~~l~~~l~~~~-i~~V 69 (248)
T PRK08057 3 PRILLLGGTSEARALARAL-AAAGVDIVLSLAGRTGG---PADLPGPVRVG--------GFGGAEGLAAYLREEG-IDLV 69 (248)
T ss_pred ceEEEEechHHHHHHHHHH-HhCCCeEEEEEccCCCC---cccCCceEEEC--------CCCCHHHHHHHHHHCC-CCEE
Confidence 4588889999998777543 44576666654443232 22334333322 34 7888999887654 5666
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+= .++|.-...+ +.+.+.|++.|+..+-
T Consensus 70 ID--ATHPfA~~is----~~a~~ac~~~~ipyiR 97 (248)
T PRK08057 70 ID--ATHPYAAQIS----ANAAAACRALGIPYLR 97 (248)
T ss_pred EE--CCCccHHHHH----HHHHHHHHHhCCcEEE
Confidence 53 3556533333 5667788888888663
No 424
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=50.09 E-value=1.5e+02 Score=25.35 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=18.7
Q ss_pred CCHHHHHHHHHHHHHcCCEEEE
Q 015768 181 IPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~ 202 (400)
.+.+.++++.++++++|+.+++
T Consensus 190 ~~~~~l~~~~~~~~~~gl~~~i 211 (213)
T PRK10076 190 PSSADVATMREMAERAGFQVTV 211 (213)
T ss_pred cCHHHHHHHHHHHHHcCCeEEe
Confidence 5888899999999999887764
No 425
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=49.73 E-value=55 Score=30.22 Aligned_cols=55 Identities=24% Similarity=0.337 Sum_probs=38.2
Q ss_pred CCCEEEEeCCCcc-chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC-CCCCC
Q 015768 112 AGDSVVMFAPYYF-NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN-PGNPS 177 (400)
Q Consensus 112 ~gd~vlv~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~-p~npt 177 (400)
++.+|++.+.+.- +....+...|+++..+ |.+ .+.+++.+ -+ |..|+|+| |.+|.
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVV-P~~-----t~~eeIl~---~~--pDGiflSNGPGDP~ 234 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVV-PAD-----TSAEEILA---LN--PDGIFLSNGPGDPA 234 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEE-cCC-----CCHHHHHh---hC--CCEEEEeCCCCChh
Confidence 4567777777663 6777888899999988 754 35555543 33 48999985 67773
No 426
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=49.57 E-value=43 Score=28.60 Aligned_cols=88 Identities=17% Similarity=0.303 Sum_probs=50.9
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCCC-ccccCCCcEEEEec
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGRK-HCCVEGDHVVNLFS 229 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~-~~~~~~~~~i~~~s 229 (400)
++.++++++... +++-+-.-+..+-.. .+..+++.++|++|++.+|+++-...-. .+... |.. ..+.-+..
T Consensus 24 ~~~ve~al~~Gv--~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGVHlG---q~D~~~~~ 96 (211)
T COG0352 24 LEWVEAALKGGV--TAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVDLALAVGADGVHLG---QDDMPLAE 96 (211)
T ss_pred HHHHHHHHhCCC--eEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEEEcC---CcccchHH
Confidence 788888887653 666554333322111 5667899999999999999987543111 11100 111 11122333
Q ss_pred cccccCCCcceeEEEEcc
Q 015768 230 FSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~~ 247 (400)
..|.++ +++.+|+=+.+
T Consensus 97 ar~~~~-~~~iIG~S~h~ 113 (211)
T COG0352 97 ARELLG-PGLIIGLSTHD 113 (211)
T ss_pred HHHhcC-CCCEEEeecCC
Confidence 356665 77788887665
No 427
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=49.50 E-value=82 Score=28.42 Aligned_cols=59 Identities=7% Similarity=-0.055 Sum_probs=40.0
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.++++ .+|.+.++++++ -..+.+.+++. .++--+..++.+|..++.+.+.+. ++++|+
T Consensus 11 Pf~~dg-~iD~~~l~~l~~~l~~~Gv~gi~v~-GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 11 HFDADG-SFDEDAYRAHVEWLLSYGAAALFAA-GGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 666665 789999888876 12234666644 455556778999999998876654 355554
No 428
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=48.39 E-value=1.8e+02 Score=25.13 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=61.5
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEE----EeCC--Cc--cc-----hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768 92 VMVTAGANQAFVNIVLTLCDAGDSVV----MFAP--YY--FN-----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~~~gd~vl----v~~p--~~--~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~ 158 (400)
+++.+||-.+..++..+..+ -+.+. ++.. .| ++ ....++.+|+..+.+ +.... ..-..+.+.+.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~-~~~~~-~e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKL-YTEGT-EEDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEe-ecCCC-ccHHHHHHHHH
Confidence 56779988888888888776 44322 1121 11 11 113446678876665 43322 11245667666
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 159 l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
++.- ++..++ +|.+.+......+-++|.+-|+..+
T Consensus 81 l~~~-gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 81 LHTL-DVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHc-CCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 6543 245555 7899998888999999998887655
No 429
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=47.92 E-value=2e+02 Score=25.44 Aligned_cols=100 Identities=13% Similarity=0.050 Sum_probs=57.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeC--CCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA--PYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (400)
Q Consensus 89 ~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~--p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~ 164 (400)
.+++++|-|.+..+...+... +++.+|++.+ |.+.+.. ..+...|+.+..+ +-. .+...+..
T Consensus 86 ~~dvILT~s~S~~v~~~l~~~-~~~~~V~v~ESrP~~eG~~~a~~L~~~GI~vtli-~Ds---------a~~~~m~~--- 151 (253)
T PRK06372 86 NDSVIGTISSSQVLKAFISSS-EKIKSVYILESRPMLEGIDMAKLLVKSGIDVVLL-TDA---------SMCEAVLN--- 151 (253)
T ss_pred CCCEEEEeCCcHHHHHHHHhc-CCCCEEEEecCCCchHHHHHHHHHHHCCCCEEEE-ehh---------HHHHHHHh---
Confidence 356889888777777776543 3445666654 5544422 3345568887766 211 12222222
Q ss_pred CeEEEEeC-CCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 165 PKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 165 ~~~v~l~~-p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
...|++.. .-...|.+.++---..++-.|+++++++++
T Consensus 152 vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 152 VDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 24444432 223345555555556677788999999998
No 430
>PRK10494 hypothetical protein; Provisional
Probab=47.19 E-value=50 Score=29.26 Aligned_cols=69 Identities=9% Similarity=0.122 Sum_probs=40.7
Q ss_pred HHHHHHHhhcCCCCCcEEEeCChHHHHHHH--HHHhcCCCCEEEEeCCCcc-chhHHHHhcCcEEEEeccCCC
Q 015768 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNI--VLTLCDAGDSVVMFAPYYF-NSYMSFQMTGVTHILVGPCSS 145 (400)
Q Consensus 76 ~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~--~~~l~~~gd~vlv~~p~~~-~~~~~~~~~g~~~~~~~~~~~ 145 (400)
++.+.+...+|+++++|++-+-+..-.+.+ ...+.+....++|+++.|- -....++..|.++++. |.+.
T Consensus 140 ~~~~~~l~~lGVp~~~Ii~e~~s~nT~eNa~~~~~~~~~~~iiLVTsa~Hm~RA~~~f~~~Gl~v~p~-Ptd~ 211 (259)
T PRK10494 140 EVGARVAQSLGVPREDIITLDLPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPA-PANQ 211 (259)
T ss_pred HHHHHHHHHcCCCHHHeeeCCCCCCHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHHHcCCceeec-CCcc
Confidence 344444445699998888753332222222 2233333345777776662 2446788999999988 7753
No 431
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=47.09 E-value=90 Score=28.38 Aligned_cols=68 Identities=10% Similarity=0.053 Sum_probs=44.3
Q ss_pred cCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 133 TGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 133 ~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
.|+-+..+-|.+++| .+|.+.++++++ -..+.+.+++. .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 9 ~Gv~~a~vTPf~~dg-~iD~~~l~~li~~l~~~Gv~Gi~~~-GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 9 SGLLSFPVTPFDADG-SFDEAAYREHLEWLAPYGAAALFAA-GGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CceEEeeeCCCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 455433333777676 789999999887 22235777644 444455678999999999877653 355554
No 432
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=46.57 E-value=1.6e+02 Score=23.93 Aligned_cols=89 Identities=19% Similarity=0.100 Sum_probs=48.7
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768 93 MVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~ 172 (400)
+++.++...=..++..|.+.|-.|.+..-.-..... ..+++++.. .. .|.+.+.+.+..- .+|+.+.
T Consensus 2 ~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~-d~------~d~~~~~~al~~~---d~vi~~~ 68 (183)
T PF13460_consen 2 LVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQG-DL------FDPDSVKAALKGA---DAVIHAA 68 (183)
T ss_dssp EEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEES-CT------TCHHHHHHHHTTS---SEEEECC
T ss_pred EEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cccccccee-ee------hhhhhhhhhhhhc---chhhhhh
Confidence 444432233344555565566666544433222222 566676655 22 3778899888743 4555553
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768 173 PGNPSGTYIPERLLKRISDLCKAAGS 198 (400)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (400)
+.++. +.+..+.+.+.|+++|+
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhcc----ccccccccccccccccc
Confidence 32222 36667888888887654
No 433
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=46.44 E-value=2e+02 Score=25.69 Aligned_cols=82 Identities=20% Similarity=0.120 Sum_probs=46.7
Q ss_pred CCCCE-EEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 111 DAGDS-VVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 111 ~~gd~-vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
+.|-. +.+....-....+.++..|..+..+ +.. .++..|.+.+.+.+... ++.++++.+. .++.+..+.+
T Consensus 29 ~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~-~~~-~~~~~d~~~~~~~l~~~-~~d~vV~D~y------~~~~~~~~~~ 99 (279)
T TIGR03590 29 AQGAEVAFACKPLPGDLIDLLLSAGFPVYEL-PDE-SSRYDDALELINLLEEE-KFDILIVDHY------GLDADWEKLI 99 (279)
T ss_pred HCCCEEEEEeCCCCHHHHHHHHHcCCeEEEe-cCC-CchhhhHHHHHHHHHhc-CCCEEEEcCC------CCCHHHHHHH
Confidence 45534 4444443333356778889988777 433 22344677777777754 3588887754 2454444443
Q ss_pred HHHHHHcC-CEEEEccc
Q 015768 190 SDLCKAAG-SWLVVDNT 205 (400)
Q Consensus 190 ~~l~~~~~-~~li~D~a 205 (400)
.+ .+ .++++||-
T Consensus 100 k~----~~~~l~~iDD~ 112 (279)
T TIGR03590 100 KE----FGRKILVIDDL 112 (279)
T ss_pred HH----hCCeEEEEecC
Confidence 32 33 45667765
No 434
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=46.26 E-value=1e+02 Score=27.97 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=40.1
Q ss_pred CcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 134 GVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 134 g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|+-+..+-|.+++| .+|.+.++++++ -..+.+.+++. .++--+..++.+|.+++.+.+.+.
T Consensus 8 Gi~~a~vTPf~~dg-~iD~~~l~~li~~l~~~Gv~gi~v~-GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 8 GLLSFPVTPFDADG-SFDEAAYRENIEWLLGYGLEALFAA-GGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred ceEEeeeCCcCCCC-CcCHHHHHHHHHHHHhcCCCEEEEC-CCCcCcccCCHHHHHHHHHHHHHH
Confidence 44333333777665 789999888876 12235677644 445556778999999999876653
No 435
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=45.76 E-value=1e+02 Score=28.25 Aligned_cols=56 Identities=21% Similarity=0.284 Sum_probs=35.4
Q ss_pred CHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEccccc
Q 015768 151 DADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTYE 207 (400)
Q Consensus 151 ~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~-~~li~D~a~~ 207 (400)
+.+.+++.++ ..+..++|++- .|.|.|.+..-+.+.+..+-.++.+ +++++++...
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AA 140 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAA 140 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeec
Confidence 4555555544 33445777655 5789999988777666555554444 7777776544
No 436
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=45.61 E-value=54 Score=30.27 Aligned_cols=69 Identities=12% Similarity=0.055 Sum_probs=41.3
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+.+...+.++..+--.|+++|.+..+...++-.... .. ....+.|-.++.+++++|.+.|+++||-||-
T Consensus 25 d~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga-~~-----~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 25 DLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGG-ST-----EVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHhCCcEEEEEeecCCcceeeecCccccccccc-cc-----ccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 344555666655513455677655444333221111 00 1123456689999999999999999998874
No 437
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=45.33 E-value=48 Score=29.03 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=32.7
Q ss_pred CHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 015768 151 DADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 151 ~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~ 207 (400)
+.+.+.+.++ ++..+++|. +|.+.+.+.++.+.++.+++++++|+|=+.+
T Consensus 44 ~~~~~~~ql~~~~~~~~~~aik-------iG~l~~~~~v~~i~~~l~~~~~~vV~DPVm~ 96 (246)
T PF08543_consen 44 DSEMIKAQLDALLEDMKFDAIK-------IGYLGSAEQVEIIADFLKKPKIPVVLDPVMG 96 (246)
T ss_dssp -HHHHHHHHHHHHHTSC-SEEE-------E-S-SSHHHHHHHHHHHHHTTTEEEEE---E
T ss_pred CHHHHHHHHHHhcccccccEEE-------EcccCCchhhhhHHHHHhccCCCEEEecccc
Confidence 5555665554 333467887 7899999999999999988888888776544
No 438
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=45.18 E-value=2.8e+02 Score=26.39 Aligned_cols=125 Identities=11% Similarity=0.097 Sum_probs=78.2
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc-----------------CCCCEEEEeCCCccc-hhHH
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-----------------DAGDSVVMFAPYYFN-SYMS 129 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~-----------------~~gd~vlv~~p~~~~-~~~~ 129 (400)
.....+.+.+..|...+-.++|-.-+-++...-.+..+...-+ -+-++|+..+||-.- ....
T Consensus 61 ~Dl~~I~Rkl~~w~~~LprV~PfYAVKCN~dp~vl~~La~lG~gfdcaSk~E~~lvl~~gv~P~riIyanpcK~~s~Iky 140 (448)
T KOG0622|consen 61 ADLGAIERKLEAWKKALPRVRPFYAVKCNSDPKVLRLLASLGCGFDCASKNELDLVLSLGVSPERIIYANPCKQVSQIKY 140 (448)
T ss_pred ecHHHHHHHHHHHHHhcccCCCceeEEeCCCHHHHHHHHHcCccceecChHHHHHHHhcCCChHHeEecCCCccHHHHHH
Confidence 3456777777777766666776666666666444444333211 134789999999743 3355
Q ss_pred HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC--CCCccC-----CCHHHHHHHHHHHHHcCCEEE
Q 015768 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG--NPSGTY-----IPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~--nptG~~-----~~~~~l~~i~~l~~~~~~~li 201 (400)
+...|+.+-.+ . +.+++.+.-+.++..++++-.++. +.+|.. .+.+++++|.+.++++++-++
T Consensus 141 Aa~~gV~~~tf-D--------ne~el~kv~~~hP~a~llLrIatdds~a~~~l~~KFG~~~~~~~~lLd~ak~l~lnvv 210 (448)
T KOG0622|consen 141 AAKHGVSVMTF-D--------NEEELEKVAKSHPNANLLLRIATDDSTATCRLNLKFGCSLDNCRHLLDMAKELELNVV 210 (448)
T ss_pred HHHcCCeEEee-c--------CHHHHHHHHHhCCCceEEEEEccCCCcccccccCccCCCHHHHHHHHHHHHHcCceEE
Confidence 56678877666 2 345566665556655776654443 233321 467789999999999977655
No 439
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=45.11 E-value=1.5e+02 Score=23.28 Aligned_cols=57 Identities=11% Similarity=0.049 Sum_probs=37.2
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
..++..|++++.+ |....++++.+...... +.+|.++.... .....++++.+.+++.
T Consensus 25 ~~lr~~G~eVi~L------G~~vp~e~i~~~a~~~~-~d~V~lS~~~~-----~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 25 RALTEAGFEVINL------GVMTSQEEFIDAAIETD-ADAILVSSLYG-----HGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHHcC-CCEEEEcCccc-----cCHHHHHHHHHHHHhc
Confidence 4568889999887 33457778877776443 58888764433 2333467777766665
No 440
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=44.74 E-value=97 Score=27.93 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=37.0
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.+++| .+|.+.+++.++ -..+.+.+++. .++--+..++.+|..++.+.+.+.
T Consensus 12 Pf~~dg-~iD~~~l~~~i~~l~~~Gv~gi~~~-Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 12 PFKEDG-SVDFAALRKLVDYLIANGTDGLVVV-GTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-CcCCccccCCHHHHHHHHHHHHHH
Confidence 677665 789888888876 22335677654 455556778999988888876653
No 441
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=44.30 E-value=1.1e+02 Score=27.78 Aligned_cols=58 Identities=12% Similarity=0.023 Sum_probs=39.6
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLV 201 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li 201 (400)
|.+++| .+|.+.++++++ -..+.+.+++. .++--+..++.+|..++.+.+.+. ++.++
T Consensus 11 Pf~~dg-~iD~~~l~~lv~~~~~~Gv~gi~v~-GstGE~~~Ls~~Er~~l~~~~~~~~~g~~pvi 73 (294)
T TIGR02313 11 PFKRNG-DIDEEALRELIEFQIEGGSHAISVG-GTSGEPGSLTLEERKQAIENAIDQIAGRIPFA 73 (294)
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccCcccccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 777776 689999998876 22335666644 445556778999999998876542 35554
No 442
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=43.77 E-value=3.4e+02 Score=27.41 Aligned_cols=102 Identities=14% Similarity=0.151 Sum_probs=63.6
Q ss_pred EEeCChHHHHHHHHHHhcCCCCEEEEe-CCCccch------hHHHHhcCc-EE-EEeccCC-CCCCCCCHHHHHHhhccC
Q 015768 93 MVTAGANQAFVNIVLTLCDAGDSVVMF-APYYFNS------YMSFQMTGV-TH-ILVGPCS-SKTLHPDADWLEKTLETK 162 (400)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~~~gd~vlv~-~p~~~~~------~~~~~~~g~-~~-~~~~~~~-~~~~~~~~e~l~~~l~~~ 162 (400)
+..++...|...+..++.+ +++|++. +..-.+. ...++..|. .+ .++ |.. .+|+.++.+.++++....
T Consensus 50 ~~l~~m~~a~~ri~~ai~~-~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~I-P~R~~eGYGl~~~~i~~~~~~~ 127 (575)
T PRK11070 50 QQLSGIEKAVELLYNALRE-GTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLV-PNRFEDGYGLSPEVVDQAHARG 127 (575)
T ss_pred HHhhCHHHHHHHHHHHHHC-CCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEe-CCCCcCCCCCCHHHHHHHHhcC
Confidence 3457788888888888765 4566554 3333332 245677887 34 345 644 678889999999877654
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 015768 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~ 207 (400)
. ++|+.+-+ |.. + .+.++.|+++|+-+|+=|-|.
T Consensus 128 ~--~LiItvD~----Gi~-~----~e~i~~a~~~gidvIVtDHH~ 161 (575)
T PRK11070 128 A--QLIVTVDN----GIS-S----HAGVAHAHALGIPVLVTDHHL 161 (575)
T ss_pred C--CEEEEEcC----CcC-C----HHHHHHHHHCCCCEEEECCCC
Confidence 3 67766522 111 3 233445778899888866553
No 443
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=43.44 E-value=1e+02 Score=27.79 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=43.3
Q ss_pred EEEeCCCccchhHHHHh--cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH
Q 015768 116 VVMFAPYYFNSYMSFQM--TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC 193 (400)
Q Consensus 116 vlv~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~ 193 (400)
-+..-|+|++..++.+. -..-++.+ |.+ .-++.++++...+. +.+++..... +...-++|.+.+
T Consensus 45 ~v~G~~~y~sv~dlp~~~~~Dlavi~v-pa~-----~v~~~l~e~~~~Gv--k~avIis~Gf------~e~~~~~l~~~a 110 (286)
T TIGR01019 45 TVLGLPVFDSVKEAVEETGANASVIFV-PAP-----FAADAIFEAIDAGI--ELIVCITEGI------PVHDMLKVKRYM 110 (286)
T ss_pred eecCeeccCCHHHHhhccCCCEEEEec-CHH-----HHHHHHHHHHHCCC--CEEEEECCCC------CHHHHHHHHHHH
Confidence 33455667777766654 23344444 321 13566676666443 5554443222 323357899999
Q ss_pred HHcCCEEEEcccc
Q 015768 194 KAAGSWLVVDNTY 206 (400)
Q Consensus 194 ~~~~~~li~D~a~ 206 (400)
+++|+.++==++.
T Consensus 111 ~~~girilGPNc~ 123 (286)
T TIGR01019 111 EESGTRLIGPNCP 123 (286)
T ss_pred HHcCCEEECCCCc
Confidence 9999998844443
No 444
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=43.22 E-value=2.6e+02 Score=25.45 Aligned_cols=107 Identities=16% Similarity=0.130 Sum_probs=62.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCC-CEEEE-eCCC--c--cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 89 KSSVMVTAGANQAFVNIVLTLC--DAG-DSVVM-FAPY--Y--FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 89 ~~~i~~~~g~t~a~~~~~~~l~--~~g-d~vlv-~~p~--~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
.-+.++|-|+.++++.-..+.. +-| +.|++ ..+. | .+.....+.+|..++.++...+.+.+...+.+.+.++
T Consensus 63 g~dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~ 142 (323)
T COG2515 63 GADTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVR 142 (323)
T ss_pred CCcEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHHH
Confidence 4557889888888887666553 334 44443 3333 2 2233344678999888833333333556677777666
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015768 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (400)
Q Consensus 161 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~ 195 (400)
.+...--++.....||.|..-=.+-..+|.+-+++
T Consensus 143 ~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 143 KQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred hcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 43322344445557886665544446777776665
No 445
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=42.91 E-value=1.2e+02 Score=26.65 Aligned_cols=95 Identities=16% Similarity=0.155 Sum_probs=54.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHh-cCcEEEEeccCCCCCCCC-CHHHHHHhhccCCCCeEE
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSSKTLHP-DADWLEKTLETKPTPKLV 168 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~e~l~~~l~~~~~~~~v 168 (400)
+|++..|++++-..+-... +.|. |+++.-+-.+-...-.. .+..+. + | .+ +.+.+++.++.+. +++|
T Consensus 2 ~ILvlgGTtE~r~la~~L~-~~g~-v~~sv~t~~g~~~~~~~~~~~~v~-~------G-~lg~~~~l~~~l~~~~-i~~v 70 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAERLA-EAGY-VIVSVATSYGGELLKPELPGLEVR-V------G-RLGDEEGLAEFLRENG-IDAV 70 (249)
T ss_pred EEEEEechHHHHHHHHHHH-hcCC-EEEEEEhhhhHhhhccccCCceEE-E------C-CCCCHHHHHHHHHhCC-CcEE
Confidence 5788899999988776544 4555 55554332222211111 122222 2 1 34 7888888887554 5665
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+= .++|.-...+ +.+.+.|++.|+.++-
T Consensus 71 ID--ATHPfA~~is----~na~~a~~~~~ipylR 98 (249)
T PF02571_consen 71 ID--ATHPFAAEIS----QNAIEACRELGIPYLR 98 (249)
T ss_pred EE--CCCchHHHHH----HHHHHHHhhcCcceEE
Confidence 53 3556544443 5666778888888663
No 446
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=42.87 E-value=1.2e+02 Score=27.36 Aligned_cols=53 Identities=9% Similarity=0.019 Sum_probs=37.0
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCC-CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPT-PKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~-~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.+++| .+|.+.+++.++ -... ...|++. .++--+..++.+|..++.+.+.+.
T Consensus 11 Pf~~dg-~iD~~~~~~~i~~~i~~G~v~gi~~~-GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 11 SFNEDG-TINEKGLRQIIRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred CCCCCC-CcCHHHHHHHHHHHHhCCCcCEEEEC-CcccccccCCHHHHHHHHHHHHHH
Confidence 777776 789999988876 1222 4565543 455556778999999998877654
No 447
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=42.75 E-value=86 Score=28.03 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=35.7
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.+++| .+|.+.+++.++ -..+.+.+++. .++--+..++.+|.+++.+.+.+.
T Consensus 8 Pf~~dg-~iD~~~~~~~i~~l~~~Gv~gi~~~-GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 8 PFTADG-EVDLDALRRLVEFLIEAGVDGLVVL-GTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-CCCcccccCCHHHHHHHHHHHHHH
Confidence 666665 688888888876 12234666544 455556778888888888876654
No 448
>PLN02417 dihydrodipicolinate synthase
Probab=42.64 E-value=98 Score=27.78 Aligned_cols=59 Identities=7% Similarity=-0.057 Sum_probs=39.6
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.+++.++ -..+...|++. .++--+..++.+|..++.+.+.+. .+.+++
T Consensus 12 Pf~~~g-~iD~~~~~~~i~~l~~~Gv~Gi~~~-GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~ 75 (280)
T PLN02417 12 PYLPDG-RFDLEAYDSLVNMQIENGAEGLIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIG 75 (280)
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 777666 789999888876 12235677654 444456678999999998876553 355543
No 449
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=41.89 E-value=1.5e+02 Score=22.40 Aligned_cols=79 Identities=16% Similarity=0.095 Sum_probs=44.5
Q ss_pred CCEEEEeCCCccchhHHHHh-cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015768 113 GDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (400)
Q Consensus 113 gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~ 191 (400)
|-.++.+. ++...++. .|+.+..+ ...+.+. + +++.+.+..+. +.+|+-+ | +|.|.-....+-..|.+
T Consensus 27 Gf~i~AT~----gTa~~L~~~~Gi~v~~v-k~~~~~g--~-~~i~~~i~~g~-i~~VInt-~-~~~~~~~~~~dg~~iRr 95 (115)
T cd01422 27 RHRLVATG----TTGLLIQEATGLTVNRM-KSGPLGG--D-QQIGALIAEGE-IDAVIFF-R-DPLTAQPHEPDVKALLR 95 (115)
T ss_pred CCEEEEec----hHHHHHHHhhCCcEEEE-ecCCCCc--h-hHHHHHHHcCc-eeEEEEc-C-CCCCCCcccccHHHHHH
Confidence 55555554 33355555 68776666 5432332 2 34666666553 4555433 2 22233322334788999
Q ss_pred HHHHcCCEEEE
Q 015768 192 LCKAAGSWLVV 202 (400)
Q Consensus 192 l~~~~~~~li~ 202 (400)
.|.+++++++.
T Consensus 96 ~a~~~~Ip~~T 106 (115)
T cd01422 96 LCDVYNIPLAT 106 (115)
T ss_pred HHHHcCCCEEE
Confidence 99999998875
No 450
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=41.45 E-value=1.2e+02 Score=27.49 Aligned_cols=53 Identities=9% Similarity=0.087 Sum_probs=37.5
Q ss_pred cCCCCCCCCCHHHHHHhhc--cC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLE--TK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.+++| .+|.+.++++++ -. .+.+.+++. .++--+..++.+|..++.+.+.+.
T Consensus 14 Pf~~dg-~iD~~~~~~li~~l~~~~Gv~gi~v~-GstGE~~~Ls~eEr~~~~~~~~~~ 69 (293)
T PRK04147 14 PFDEDG-QIDEQGLRRLVRFNIEKQGIDGLYVG-GSTGEAFLLSTEEKKQVLEIVAEE 69 (293)
T ss_pred cCCCCC-CcCHHHHHHHHHHHHhcCCCCEEEEC-CCccccccCCHHHHHHHHHHHHHH
Confidence 677665 689999988876 22 335677654 444455678999999999877654
No 451
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=41.27 E-value=64 Score=29.33 Aligned_cols=68 Identities=13% Similarity=0.152 Sum_probs=40.6
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+.+...+.++..+--.|+++|.+..+...++-.... . .++ .+.|-.++.+++++|.+.|+++||-||-
T Consensus 23 d~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~--~----~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 23 DVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGG--Q----INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcc--c----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 334556666665512345566555444433322211 0 111 2345589999999999999999998874
No 452
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=40.64 E-value=70 Score=28.09 Aligned_cols=49 Identities=16% Similarity=0.254 Sum_probs=35.5
Q ss_pred CHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC-EEEEcccc
Q 015768 151 DADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS-WLVVDNTY 206 (400)
Q Consensus 151 ~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~-~li~D~a~ 206 (400)
+.+.+++.++ ++-.+++|- +|.+.+.+.++.+.+.+++++. .+++|-+.
T Consensus 51 ~~~~~~~q~~~~~~d~~~~aik-------iG~l~~~~~~~~i~~~~~~~~~~~vVlDPv~ 103 (254)
T TIGR00097 51 PPDFVEAQLDAVFSDIPVDAAK-------TGMLASAEIVEAVARKLREYPVRPLVVDPVM 103 (254)
T ss_pred CHHHHHHHHHHHHhCCCCCEEE-------ECCcCCHHHHHHHHHHHHhcCCCcEEECCcc
Confidence 4555555544 233356665 6888899999999999999988 68888663
No 453
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=40.44 E-value=87 Score=28.45 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=40.2
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++ -..+...|+++ .++--+..++.+|..++.+.+.+. .+++|+
T Consensus 15 PF~~dg-~vD~~a~~~lv~~li~~Gv~gi~~~-GttGE~~~Ls~eEr~~v~~~~v~~~~grvpvia 78 (299)
T COG0329 15 PFDEDG-SVDEEALRRLVEFLIAAGVDGLVVL-GTTGESPTLTLEERKEVLEAVVEAVGGRVPVIA 78 (299)
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-CCCccchhcCHHHHHHHHHHHHHHHCCCCcEEE
Confidence 666665 589999999876 12224777655 344445678999999999988764 255554
No 454
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=40.44 E-value=1.6e+02 Score=22.09 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=40.9
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEEccc
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVVDNT 205 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~--~~~li~D~a 205 (400)
..++..|.++..+ .. ..+.+++.+.+.... +++|.++... ........++++..++. ++.+++=..
T Consensus 22 ~~l~~~G~~v~~~-d~-----~~~~~~l~~~~~~~~-pd~V~iS~~~-----~~~~~~~~~l~~~~k~~~p~~~iv~GG~ 89 (121)
T PF02310_consen 22 AYLRKAGHEVDIL-DA-----NVPPEELVEALRAER-PDVVGISVSM-----TPNLPEAKRLARAIKERNPNIPIVVGGP 89 (121)
T ss_dssp HHHHHTTBEEEEE-ES-----SB-HHHHHHHHHHTT-CSEEEEEESS-----STHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHCCCeEEEE-CC-----CCCHHHHHHHHhcCC-CcEEEEEccC-----cCcHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 4567789998877 32 235577877776443 6888876432 23444567777776655 667776433
No 455
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=40.41 E-value=1.4e+02 Score=23.60 Aligned_cols=92 Identities=20% Similarity=0.299 Sum_probs=52.2
Q ss_pred ChHHHHHHHHHHhcCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768 97 GANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (400)
Q Consensus 97 g~t~a~~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~n 175 (400)
++...+..++..+.+.+ +.|++..+. ......+...+++++.- +....| .+..+...+..-.....+++..+-.
T Consensus 22 ~g~~li~~~l~~l~~~~~~~Ivvv~~~-~~~~~~~~~~~~~~v~~-~~~~~G---~~~sl~~a~~~~~~~~~vlv~~~D~ 96 (160)
T PF12804_consen 22 GGKPLIERVLEALREAGVDDIVVVTGE-EEIYEYLERYGIKVVVD-PEPGQG---PLASLLAALSQLPSSEPVLVLPCDQ 96 (160)
T ss_dssp TTEEHHHHHHHHHHHHTESEEEEEEST-HHHHHHHTTTTSEEEE--STSSCS---HHHHHHHHHHTSTTSSEEEEEETTE
T ss_pred CCccHHHHHHHHhhccCCceEEEecCh-HHHHHHHhccCceEEEe-ccccCC---hHHHHHHHHHhcccCCCcEEEeCCc
Confidence 44466777777776554 566555444 23334445567666543 333333 4667777666421235666665555
Q ss_pred CCccCCCHHHHHHHHHHHHHc
Q 015768 176 PSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~ 196 (400)
|. ++.+.+.++.+..++.
T Consensus 97 p~---~~~~~l~~l~~~~~~~ 114 (160)
T PF12804_consen 97 PF---LSPELLRRLLEALEKS 114 (160)
T ss_dssp TT---S-HHHHHHHHHHHHHT
T ss_pred cc---cCHHHHHHHHHHHhcc
Confidence 44 6878888888877643
No 456
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=40.22 E-value=1.2e+02 Score=26.87 Aligned_cols=96 Identities=14% Similarity=0.167 Sum_probs=53.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEE
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSV 170 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l 170 (400)
.|++..|++++-..+- .|.+.|..|++..-+-.+-.. +...|...+.. | .++.+.+.+.+.... +++|+-
T Consensus 2 ~ILvlGGT~egr~la~-~L~~~g~~v~~s~~t~~~~~~-~~~~g~~~v~~------g-~l~~~~l~~~l~~~~-i~~VID 71 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAK-GLIAQGIEILVTVTTSEGKHL-YPIHQALTVHT------G-ALDPQELREFLKRHS-IDILVD 71 (256)
T ss_pred eEEEEechHHHHHHHH-HHHhCCCeEEEEEccCCcccc-ccccCCceEEE------C-CCCHHHHHHHHHhcC-CCEEEE
Confidence 4788888888655544 555567666655443322221 22333333333 1 346777888887543 465543
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
..+|.-...+ +.+.+.|++.|+..+-
T Consensus 72 --AtHPfA~~is----~~a~~a~~~~~ipylR 97 (256)
T TIGR00715 72 --ATHPFAAQIT----TNATAVCKELGIPYVR 97 (256)
T ss_pred --cCCHHHHHHH----HHHHHHHHHhCCcEEE
Confidence 3445433333 5566788888887663
No 457
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=39.95 E-value=2.7e+02 Score=24.69 Aligned_cols=163 Identities=13% Similarity=0.110 Sum_probs=77.7
Q ss_pred HHHHHhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH-hhcCCCCCcEEEe--CC
Q 015768 22 IQELVRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN-QENKLYKSSVMVT--AG 97 (400)
Q Consensus 22 ~~~~~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~-~~~~~~~~~i~~~--~g 97 (400)
+..+.++|-+++.++..+++.- --|-++++..+++.++. . ...+-+.+.+ ++ +..++ .=++++ +-
T Consensus 32 ~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~~AL~~G~-----~---~~~~~~~~~~-~r~~~~~~--p~vlm~Y~N~ 100 (258)
T PRK13111 32 IKALVEAGADIIELGIPFSDPVADGPVIQAASLRALAAGV-----T---LADVFELVRE-IREKDPTI--PIVLMTYYNP 100 (258)
T ss_pred HHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCC-----C---HHHHHHHHHH-HHhcCCCC--CEEEEecccH
Confidence 3345567788888888765542 23555566666666532 1 2223333333 22 11122 123443 11
Q ss_pred -hHHHHHHHHHHhcCCC-CEEEEeCCCcc---chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768 98 -ANQAFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 98 -~t~a~~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~ 172 (400)
-..+++..+..+.+-| |.+++++-.+. .+...++..|...+.+ +.+. .+.+.++...+..+ ..|++..
T Consensus 101 i~~~G~e~f~~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~l--vap~---t~~eri~~i~~~s~--gfIY~vs 173 (258)
T PRK13111 101 IFQYGVERFAADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFL--VAPT---TTDERLKKIASHAS--GFVYYVS 173 (258)
T ss_pred HhhcCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEE--eCCC---CCHHHHHHHHHhCC--CcEEEEe
Confidence 1225556666666666 77777765553 2334456677776663 1111 12344444433332 4565543
Q ss_pred CCCCCccC-CCHHHHHHHHHHHHHc-CCEEEE
Q 015768 173 PGNPSGTY-IPERLLKRISDLCKAA-GSWLVV 202 (400)
Q Consensus 173 p~nptG~~-~~~~~l~~i~~l~~~~-~~~li~ 202 (400)
-...||.. ...+.+.+..+.++++ ++++++
T Consensus 174 ~~GvTG~~~~~~~~~~~~i~~vk~~~~~pv~v 205 (258)
T PRK13111 174 RAGVTGARSADAADLAELVARLKAHTDLPVAV 205 (258)
T ss_pred CCCCCCcccCCCccHHHHHHHHHhcCCCcEEE
Confidence 33345552 1122355455544443 455543
No 458
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=39.83 E-value=1.4e+02 Score=27.19 Aligned_cols=103 Identities=17% Similarity=0.085 Sum_probs=61.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEE-
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS- 169 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~- 169 (400)
.|++|.|+--.=.+....|.+.|..|+|.+.-..+....+...-.+.+.- . ..|-+.|.+.+.... +.+|+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~g-D------i~D~~~L~~vf~~~~-idaViH 73 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEG-D------LLDRALLTAVFEENK-IDAVVH 73 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEe-c------cccHHHHHHHHHhcC-CCEEEE
Confidence 46788877666677778888899888877777778887776543333322 2 237777888887554 45443
Q ss_pred Ee-------CCCCCCccC-CCHHHHHHHHHHHHHcCCEEE
Q 015768 170 VV-------NPGNPSGTY-IPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 170 l~-------~p~nptG~~-~~~~~l~~i~~l~~~~~~~li 201 (400)
+. +.++|.-.. ...---..|++.|+++|+.=+
T Consensus 74 FAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~ 113 (329)
T COG1087 74 FAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKF 113 (329)
T ss_pred CccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEE
Confidence 11 122222110 111124567788888886533
No 459
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=39.64 E-value=3e+02 Score=25.11 Aligned_cols=105 Identities=12% Similarity=0.065 Sum_probs=56.3
Q ss_pred CCCcEEEeCChH--------HHHHHHHHHhcCCC--CEEEEe--CCCccc---hhHHHHhcCcEEEEeccCCCCCCCCCH
Q 015768 88 YKSSVMVTAGAN--------QAFVNIVLTLCDAG--DSVVMF--APYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDA 152 (400)
Q Consensus 88 ~~~~i~~~~g~t--------~a~~~~~~~l~~~g--d~vlv~--~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~ 152 (400)
...++++|.|-+ .....+++...+.| -+|++. .|.+.+ ...-+...|+.+..+ +-.
T Consensus 117 ~~g~~ILT~~~Sg~lat~~~~tv~~~l~~A~~~g~~~~V~v~EsrP~~~G~~~~a~~L~~~gI~vtlI-~Ds-------- 187 (303)
T TIGR00524 117 KDGDTVLTHCNAGALATSDYGTALGVIRSAWEDGKRIRVIACETRPRNQGSRLTAWELMQDGIDVTLI-TDS-------- 187 (303)
T ss_pred cCCCEEEEecCCccccccCcchHHHHHHHHHHcCCceEEEECCCCCccchHHHHHHHHHHCCCCEEEE-Chh--------
Confidence 345678886644 33333444443333 455554 566655 234556678888777 211
Q ss_pred HHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 153 DWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 153 e~l~~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
.+...+..+ ....|++. ..-...|-+..+----.++-+|+.|++++++=
T Consensus 188 -a~~~~m~~~-~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 188 -MAAYFMQKG-EIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred -HHHHHcccc-CCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 223333311 13555543 22234455555444566777788999998874
No 460
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=39.38 E-value=1.6e+02 Score=26.08 Aligned_cols=50 Identities=18% Similarity=0.246 Sum_probs=35.4
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCCCccC----CCHHHHHHHHHHHHHcCCEEE
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTY----IPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~----~~~~~l~~i~~l~~~~~~~li 201 (400)
.+.|.+++...+....++|.||+|--|.. .+......|.++-+..|+.+|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 55677777766656778888998877766 777788888877554555544
No 461
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=39.25 E-value=1.6e+02 Score=27.96 Aligned_cols=106 Identities=15% Similarity=0.124 Sum_probs=56.3
Q ss_pred CChHHHHHHHHHHhcCCC-CEEEEeCCCccchhHH-HHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeC
Q 015768 96 AGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMS-FQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVN 172 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~~~g-d~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~ 172 (400)
.|--++=..+...+...+ +.=++..+.++..... +-..+-+.+.+ +..+.....+.+.|.+.+.. -...++++++-
T Consensus 73 vG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s~nQQllRv-D~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSD 151 (467)
T COG2870 73 VGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLSRNQQLLRL-DFEEKFPIEDENKLLEKIKNALKSFDALVLSD 151 (467)
T ss_pred eccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeecccceEEEe-cccccCcchhHHHHHHHHHHHhhcCCEEEEec
Confidence 444444444444454333 5556677777554421 11122244444 22211111233344443331 12246777763
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 015768 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~ 207 (400)
.--|.+-+ .+.+.++|++.|+++++|---.
T Consensus 152 --Y~KG~L~~---~q~~I~~ar~~~~pVLvDPKg~ 181 (467)
T COG2870 152 --YAKGVLTN---VQKMIDLAREAGIPVLVDPKGK 181 (467)
T ss_pred --cccccchh---HHHHHHHHHHcCCcEEECCCCc
Confidence 33567766 8999999999999999996443
No 462
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=37.52 E-value=3.2e+02 Score=24.94 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=56.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCC--CEEEEe--CCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 88 YKSSVMVTAGANQAFVNIVLTLCDAG--DSVVMF--APYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 88 ~~~~i~~~~g~t~a~~~~~~~l~~~g--d~vlv~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
..+++++|-|-+......++...+.| -+|++. .|...+.. ..+...|+.+..+ +-. .+...+..
T Consensus 119 ~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI-~Ds---------av~~~m~~ 188 (310)
T PRK08535 119 RDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLI-VDS---------AVRYFMKD 188 (310)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEE-ehh---------HHHHHHHh
Confidence 45667888776666666666554333 345554 33333322 3456678888777 311 22223322
Q ss_pred CCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 162 KPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 162 ~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
...|++. ..-...|.+.++---..++-+|+.|++++++=
T Consensus 189 ---vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 189 ---VDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVA 228 (310)
T ss_pred ---CCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEe
Confidence 2444443 22234555555555666777889999998873
No 463
>PLN03244 alpha-amylase; Provisional
Probab=37.37 E-value=53 Score=33.99 Aligned_cols=38 Identities=24% Similarity=0.262 Sum_probs=31.2
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccC
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~ 212 (400)
.|+...-++++++++++.|++.|+-||.|-++..+..+
T Consensus 432 ApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 432 AASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred ccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 34445557889999999999999999999999866543
No 464
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=37.27 E-value=3.1e+02 Score=24.61 Aligned_cols=102 Identities=17% Similarity=0.174 Sum_probs=52.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCC--CEEEEeC--CCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 88 YKSSVMVTAGANQAFVNIVLTLCDAG--DSVVMFA--PYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 88 ~~~~i~~~~g~t~a~~~~~~~l~~~g--d~vlv~~--p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
+..++++|.+-+.....+++...+.| -+|++.+ |.+.+.. .-+...|+.+..+ +-. . +...+..
T Consensus 108 ~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI-~Ds------a---~~~~m~~ 177 (275)
T PRK08335 108 DDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELEFLGIEFEVI-TDA------Q---LGLFAKE 177 (275)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHHHCCCCEEEE-ecc------H---HHHHHHh
Confidence 34567777665555555555554444 3566654 5555433 3355678887777 211 1 1112222
Q ss_pred CCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 162 KPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 162 ~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
...|++. ..-..-|.+..+----.++-+|+.|++++++
T Consensus 178 ---vd~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 178 ---ATLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred ---CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 2344332 1112234444433345566678899999887
No 465
>PRK04296 thymidine kinase; Provisional
Probab=37.11 E-value=2.1e+02 Score=23.80 Aligned_cols=97 Identities=9% Similarity=0.145 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCc---cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCC
Q 015768 98 ANQAFVNIVLTLCDAGDSVVMFAPYY---FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNP 173 (400)
Q Consensus 98 ~t~a~~~~~~~l~~~gd~vlv~~p~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p 173 (400)
+|.++..+.++. ..|.+|++..|.. .+....+.+.|.....+ +. ...+++.+.+.. .....+|++-..
T Consensus 16 TT~~l~~~~~~~-~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~-~~------~~~~~~~~~~~~~~~~~dvviIDEa 87 (190)
T PRK04296 16 STELLQRAYNYE-ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAI-PV------SSDTDIFELIEEEGEKIDCVLIDEA 87 (190)
T ss_pred HHHHHHHHHHHH-HcCCeEEEEeccccccccCCcEecCCCCcccce-Ee------CChHHHHHHHHhhCCCCCEEEEEcc
Confidence 456666655554 4577888776632 22333444455432211 11 123333333321 222467777765
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~ 207 (400)
+ .++.+.+.++.+.++..|+.+|+=.-..
T Consensus 88 q-----~l~~~~v~~l~~~l~~~g~~vi~tgl~~ 116 (190)
T PRK04296 88 Q-----FLDKEQVVQLAEVLDDLGIPVICYGLDT 116 (190)
T ss_pred c-----cCCHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 3 3566778888888888898888755443
No 466
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=36.90 E-value=1.8e+02 Score=21.83 Aligned_cols=57 Identities=11% Similarity=0.100 Sum_probs=35.3
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
..++..|.+++.. . .....+++.+.+.... +.+|.++.... ...+.+.++++.+++.
T Consensus 21 ~~l~~~G~~V~~l-g-----~~~~~~~l~~~~~~~~-pdvV~iS~~~~-----~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 21 RALRDAGFEVIDL-G-----VDVPPEEIVEAAKEED-ADAIGLSGLLT-----THMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHHCCCEEEEC-C-----CCCCHHHHHHHHHHcC-CCEEEEecccc-----ccHHHHHHHHHHHHHc
Confidence 4567789998765 2 2356777777665433 58888763311 2334577777777765
No 467
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=36.58 E-value=1.8e+02 Score=24.51 Aligned_cols=96 Identities=17% Similarity=0.203 Sum_probs=52.1
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc---CCCCeEEE
Q 015768 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET---KPTPKLVS 169 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~---~~~~~~v~ 169 (400)
+|=|+-+-..++.....|-+|++..|....-. ....+.|...--+ +.. +..++-+.+.. .....+|+
T Consensus 15 SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~-~i~------~~~~i~~~i~~~~~~~~~~~v~ 87 (201)
T COG1435 15 SGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSSRIGLSSEAV-VIP------SDTDIFDEIAALHEKPPVDCVL 87 (201)
T ss_pred CcchHHHHHHHHHHHHcCCeEEEEecccccccccceeeeccCCcccce-ecC------ChHHHHHHHHhcccCCCcCEEE
Confidence 55555555555556667788888888764432 2223344332111 111 12223333331 11135666
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 170 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
+.-.+. ++.+-+..+.+++.++|+.+|.=
T Consensus 88 IDEaQF-----~~~~~v~~l~~lad~lgi~Vi~~ 116 (201)
T COG1435 88 IDEAQF-----FDEELVYVLNELADRLGIPVICY 116 (201)
T ss_pred EehhHh-----CCHHHHHHHHHHHhhcCCEEEEe
Confidence 665544 56677788888888878888863
No 468
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=36.54 E-value=89 Score=27.02 Aligned_cols=49 Identities=10% Similarity=0.193 Sum_probs=34.1
Q ss_pred CHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEcccc
Q 015768 151 DADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-GSWLVVDNTY 206 (400)
Q Consensus 151 ~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-~~~li~D~a~ 206 (400)
+.+.+++.++ ++..+++|. +|.+.+.+.++.+.++++++ ++++++|-+.
T Consensus 52 ~~~~~~~~l~~~~~~~~~~~i~-------~G~l~~~~~~~~i~~~~~~~~~~~vv~Dpv~ 104 (242)
T cd01169 52 PPEFVAAQLDAVLEDIPVDAIK-------IGMLGSAEIIEAVAEALKDYPDIPVVLDPVM 104 (242)
T ss_pred CHHHHHHHHHHHHhCCCCCEEE-------ECCCCCHHHHHHHHHHHHhCCCCcEEECCce
Confidence 3444444443 233356776 48888889999999999887 8888888653
No 469
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=35.91 E-value=1.7e+02 Score=26.86 Aligned_cols=42 Identities=14% Similarity=-0.065 Sum_probs=25.3
Q ss_pred ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC
Q 015768 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 355 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 355 (400)
+.+|-....+.+.+..+.....++.+ +..+.||.-.+|.+|.
T Consensus 247 ~~~p~~~~~~~i~~~~Gi~~~~~~~~-~a~~~g~i~k~g~w~~ 288 (321)
T TIGR02012 247 VAPPFKEAEFDILYGEGISKLGEIID-LAVELDIIKKAGSWYS 288 (321)
T ss_pred CCCCCCceEEEEEcCCccchhhHHHH-HHHhCCcEEcccCEEE
Confidence 34443333444455555534456665 5558999999998763
No 470
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=35.75 E-value=2.9e+02 Score=23.86 Aligned_cols=100 Identities=14% Similarity=0.219 Sum_probs=0.0
Q ss_pred EEEeCChHHHHHHHHHHhc------------CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh
Q 015768 92 VMVTAGANQAFVNIVLTLC------------DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~------------~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l 159 (400)
++..|||-.+..++..++. ...|......+...-....++.+|+..+.+ ..... ..-..+++.+.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~-~~~~~-~e~~~~~l~~~l 81 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEEHEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKL-YTSGE-EEKEVEDLAGQL 81 (222)
T ss_pred EEEecCcHHHHHHHHHHHHcCeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEE-EcCCc-hhHHHHHHHHHH
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
.... +..|+ +|.+.+......+-++|.+-|+..+
T Consensus 82 ~~~g-v~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 82 GELD-VEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHcC-CCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
No 471
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=35.48 E-value=1.7e+02 Score=26.14 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=34.3
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.++++ .+|.+.+++.++ -..+.+.+++. .+.--+..++.+|.+++.+.+.++
T Consensus 11 Pf~~dg-~iD~~~~~~~i~~l~~~Gv~gl~v~-GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 11 PFKDDG-SVDFDALERLIEFQIENGTDGLVVC-GTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-CCCcchhhCCHHHHHHHHHHHHHH
Confidence 666665 688888888776 12224666554 333345678888888888876654
No 472
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=35.31 E-value=79 Score=28.48 Aligned_cols=144 Identities=18% Similarity=0.223 Sum_probs=59.2
Q ss_pred HHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEE--
Q 015768 46 KMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVV-- 117 (400)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vl-- 117 (400)
.+..+.+.+.+....... |....+.......+.+.+ ....-+++++.|+..+.. +...+...-..|.
T Consensus 14 ~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l----~~~~~DlIi~~gt~aa~~-~~~~~~~~iPVVf~~ 88 (294)
T PF04392_consen 14 DDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKL----KAQKPDLIIAIGTPAAQA-LAKHLKDDIPVVFCG 88 (294)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHH----CCTS-SEEEEESHHHHHH-HHHH-SS-S-EEEEC
T ss_pred HHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHH----hcCCCCEEEEeCcHHHHH-HHHhcCCCcEEEEEe
Confidence 445556666665432221 223455554444444444 223456788877755544 4444433112333
Q ss_pred EeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
+.+|...+........|-++.-+ - +.....-.++.+.+++ +.. .++.++.+++.+. +....+.+.+.++++|
T Consensus 89 V~dp~~~~l~~~~~~~~~nvTGv-~-~~~~~~~~l~l~~~l~-P~~-k~igvl~~~~~~~----~~~~~~~~~~~a~~~g 160 (294)
T PF04392_consen 89 VSDPVGAGLVDSLDRPGKNVTGV-S-ERPPIEKQLELIKKLF-PDA-KRIGVLYDPSEPN----SVAQIEQLRKAAKKLG 160 (294)
T ss_dssp ES-TTTTTS-S-SSS--SSEEEE-E-E---HHHHHHHHHHHS-TT---EEEEEEETT-HH----HHHHHHHHHHHHHHTT
T ss_pred ccChhhhhccccccCCCCCEEEE-E-CCcCHHHHHHHHHHhC-CCC-CEEEEEecCCCcc----HHHHHHHHHHHHHHcC
Confidence 22344444443333333344444 1 1110001122222222 322 2554555565442 2445778888888899
Q ss_pred CEEEE
Q 015768 198 SWLVV 202 (400)
Q Consensus 198 ~~li~ 202 (400)
+-++.
T Consensus 161 ~~l~~ 165 (294)
T PF04392_consen 161 IELVE 165 (294)
T ss_dssp -EEEE
T ss_pred CEEEE
Confidence 87653
No 473
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=35.30 E-value=2.3e+02 Score=22.51 Aligned_cols=58 Identities=12% Similarity=0.115 Sum_probs=39.8
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC
Q 015768 153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG 213 (400)
Q Consensus 153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~ 213 (400)
+.+.+.+..+.--.+|++.-|-++-.--.+ ++.|.++|.-||+++-..-+-..+...+
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~phepD---i~aLlRlc~v~nIP~AtN~aTA~~li~~ 120 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPHEPD---VKALLRLCTVWNIPLATNVATADFLIKS 120 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCCCcC---HHHHHHHHHhhCcccccCHHHHHHHHhC
Confidence 345555554432356666677776666666 9999999999999988777766555433
No 474
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=35.01 E-value=1.2e+02 Score=28.19 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=35.1
Q ss_pred CHHHHHHhhccCCCCeEEEEeCC-CCCCccC--CCHHHHHHHHHHHHHcCCEEEE
Q 015768 151 DADWLEKTLETKPTPKLVSVVNP-GNPSGTY--IPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 151 ~~e~l~~~l~~~~~~~~v~l~~p-~nptG~~--~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+++.+..++.... .+|++... -+-.+.. ++.+++++.+++++++|..+++
T Consensus 15 ~l~~l~~ai~~GA--DaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V 67 (347)
T COG0826 15 NLEDLKAAIAAGA--DAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYV 67 (347)
T ss_pred CHHHHHHHHHcCC--CEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 6777887777553 77887754 3334444 7888899999999988875443
No 475
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=34.50 E-value=1.7e+02 Score=24.42 Aligned_cols=84 Identities=14% Similarity=0.074 Sum_probs=36.0
Q ss_pred HHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhc--CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 101 AFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 101 a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
+..-++..+.+ |+-.|+++..+-.+...+-+.. ++.+.+. |.| ..-.+++.++.-. |+++++..
T Consensus 36 a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~~~v~~~~~-P~D------~~~~~~rfl~~~~-P~~~i~~E---- 103 (186)
T PF04413_consen 36 AARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLPDRVDVQYL-PLD------FPWAVRRFLDHWR-PDLLIWVE---- 103 (186)
T ss_dssp HHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-GGG-SEEE----S------SHHHHHHHHHHH---SEEEEES----
T ss_pred HHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCCCCeEEEEe-Ccc------CHHHHHHHHHHhC-CCEEEEEc----
Confidence 34445555553 6788998887765655554432 3455556 765 2344555555322 45555541
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+-+ .-.+...|++.|+.++.
T Consensus 104 -tEl-----WPnll~~a~~~~ip~~L 123 (186)
T PF04413_consen 104 -TEL-----WPNLLREAKRRGIPVVL 123 (186)
T ss_dssp ----------HHHHHH-----S-EEE
T ss_pred -ccc-----CHHHHHHHhhcCCCEEE
Confidence 122 44666777788887665
No 476
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=34.26 E-value=1.4e+02 Score=19.89 Aligned_cols=62 Identities=13% Similarity=0.163 Sum_probs=36.3
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC-HHHHHHHHHHHHHcCCEEEE
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP-ERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~l~~~~~~~li~ 202 (400)
..+...++..|.++..+ .. ..+.++ .. ...+++.+|.. . ++ .+++++|.++.++=|-++|+
T Consensus 8 ~a~~~~L~~~g~~v~~~-~~-------~~~~l~----~~--~~tll~i~~~~---~-~~~~~~~~~l~~~v~~G~~lvl~ 69 (70)
T PF14258_consen 8 YALYQLLEEQGVKVERW-RK-------PYEALE----AD--DGTLLVIGPDL---R-LSEPEEAEALLEWVEAGNTLVLA 69 (70)
T ss_pred HHHHHHHHHCCCeeEEe-cc-------cHHHhC----CC--CCEEEEEeCCC---C-CCchHHHHHHHHHHHcCCEEEEe
Confidence 35567778888887655 11 233332 22 24555554542 2 34 57899999998866666665
Q ss_pred c
Q 015768 203 D 203 (400)
Q Consensus 203 D 203 (400)
|
T Consensus 70 a 70 (70)
T PF14258_consen 70 A 70 (70)
T ss_pred C
Confidence 4
No 477
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=33.42 E-value=1.3e+02 Score=27.14 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=36.3
Q ss_pred cCCCCCCCCCHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.+++.++ +. +...+++. .++--+..++.+|..++.+++.++ ++.+|+
T Consensus 12 Pf~~dg-~id~~~~~~~i~~l~~~-Gv~gl~~~-GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 12 PFNADG-SIDEDALKRLIDFLIEA-GVDGLVVL-GSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp -BETTS-SB-HHHHHHHHHHHHHT-TSSEEEES-STTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCc-CcCHHHHHHHHHHHHHc-CCCEEEEC-CCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 566655 688888888776 22 24666654 344456778888989888887653 455554
No 478
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=33.14 E-value=1.8e+02 Score=20.64 Aligned_cols=83 Identities=13% Similarity=-0.015 Sum_probs=42.1
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEE-EeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHI-LVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
++.|.+-|-+|+.+.. ....++..|+.+. .+ +-..+| ..++.+.+..+. +.+|+- .|. +.+... .+
T Consensus 6 ~~~l~~lG~~i~AT~g----Ta~~L~~~Gi~~~~~~-~ki~~~----~~~i~~~i~~g~-id~VIn-~~~-~~~~~~-~~ 72 (90)
T smart00851 6 AKRLAELGFELVATGG----TAKFLREAGLPVKTLH-PKVHGG----ILAILDLIKNGE-IDLVIN-TLY-PLGAQP-HE 72 (90)
T ss_pred HHHHHHCCCEEEEccH----HHHHHHHCCCcceecc-CCCCCC----CHHHHHHhcCCC-eEEEEE-CCC-cCccee-cc
Confidence 3444455666666653 3466667777654 23 211222 234556666544 455543 232 212211 11
Q ss_pred HHHHHHHHHHHcCCEEE
Q 015768 185 LLKRISDLCKAAGSWLV 201 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li 201 (400)
+-..|.+.|.++++.++
T Consensus 73 d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 73 DGKALRRAAENIDIPGA 89 (90)
T ss_pred CcHHHHHHHHHcCCCee
Confidence 24567777888998765
No 479
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=33.05 E-value=3e+02 Score=23.20 Aligned_cols=41 Identities=24% Similarity=0.342 Sum_probs=23.0
Q ss_pred CHHHHHHhhc--cCCCCeEEEEe-CCCCCCccCC-CHHHHHHHHHHHHH
Q 015768 151 DADWLEKTLE--TKPTPKLVSVV-NPGNPSGTYI-PERLLKRISDLCKA 195 (400)
Q Consensus 151 ~~e~l~~~l~--~~~~~~~v~l~-~p~nptG~~~-~~~~l~~i~~l~~~ 195 (400)
|++...++.+ ++..+. ++++ -..|+||..+ + -..+.++|..
T Consensus 121 dp~~~~ki~e~lp~r~Vd-vVlSDMapnaTGvr~~D---h~~~i~LC~s 165 (232)
T KOG4589|consen 121 DPETYRKIFEALPNRPVD-VVLSDMAPNATGVRIRD---HYRSIELCDS 165 (232)
T ss_pred CHHHHHHHHHhCCCCccc-EEEeccCCCCcCcchhh---HHHHHHHHHH
Confidence 4444444443 332233 4444 4579999854 4 5667777763
No 480
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=32.81 E-value=1.9e+02 Score=26.50 Aligned_cols=27 Identities=19% Similarity=0.236 Sum_probs=15.8
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccc
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~ 207 (400)
.+.++.++|.++++++|+.+.+.-.+.
T Consensus 102 ~t~~ea~~l~~~a~~~~~~l~v~~~~R 128 (342)
T COG0673 102 LTLEEAEELVELARKAGVKLMVGFNRR 128 (342)
T ss_pred CCHHHHHHHHHHHHHcCCceeeehhhh
Confidence 345556666666666666666554433
No 481
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=32.80 E-value=2.3e+02 Score=25.24 Aligned_cols=106 Identities=13% Similarity=0.146 Sum_probs=53.7
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEe--CCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMF--APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~~~gd--~vlv~--~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
++...+++|-|-+..+..++....+.|- +|++. .|...+ +...+...|+.+..+ +. ..+...+.
T Consensus 105 I~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i-~d---------~~~~~~m~ 174 (282)
T PF01008_consen 105 INDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLI-PD---------SAVGYVMP 174 (282)
T ss_dssp C-TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE--G---------GGHHHHHH
T ss_pred ccCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEE-ec---------hHHHHHHH
Confidence 4567888888877777777777655452 34444 333333 224456679888877 31 12333343
Q ss_pred cCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 015768 161 TKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (400)
Q Consensus 161 ~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~ 204 (400)
. ....|++. ..--+.|.+...---..++-+|+++++++++=.
T Consensus 175 ~--~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~ 217 (282)
T PF01008_consen 175 R--DVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLA 217 (282)
T ss_dssp C--TESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE-
T ss_pred H--hCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEc
Confidence 3 02333333 222233433332224566667889999988753
No 482
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=32.78 E-value=3e+02 Score=23.13 Aligned_cols=57 Identities=14% Similarity=0.072 Sum_probs=39.0
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
..++..|++++.+ |-.+..+++.+.+.... +.+|.++..... ..+.++++.+.+++.
T Consensus 106 ~~l~~~G~~vi~L------G~~vp~e~~v~~~~~~~-pd~v~lS~~~~~-----~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 106 TMLRANGFDVIDL------GRDVPIDTVVEKVKKEK-PLMLTGSALMTT-----TMYGQKDINDKLKEE 162 (197)
T ss_pred HHHHhCCcEEEEC------CCCCCHHHHHHHHHHcC-CCEEEEcccccc-----CHHHHHHHHHHHHHc
Confidence 5668899999877 33567888888887543 688877743222 344577777777766
No 483
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=32.23 E-value=3.9e+02 Score=24.30 Aligned_cols=103 Identities=16% Similarity=0.126 Sum_probs=55.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCC--CEEEEe--CCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 88 YKSSVMVTAGANQAFVNIVLTLCDAG--DSVVMF--APYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 88 ~~~~i~~~~g~t~a~~~~~~~l~~~g--d~vlv~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
...++++|-|-+......+..+.+.| -+|++. .|.+.+. ...+...|+.+..+ +-. .+...+..
T Consensus 114 ~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI-~Ds---------a~~~~m~~ 183 (301)
T TIGR00511 114 RDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLI-VDS---------AVRYFMKE 183 (301)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEE-ehh---------HHHHHHHh
Confidence 34567888775555555555554333 345544 3334342 23456678888777 311 22223322
Q ss_pred CCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 162 KPTPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 162 ~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
...|++. ..-..-|.+.++---..++-+|+.|++++++=
T Consensus 184 ---vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~ 223 (301)
T TIGR00511 184 ---VDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVA 223 (301)
T ss_pred ---CCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEE
Confidence 2344433 22233455555544566777888999998873
No 484
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=32.20 E-value=2.7e+02 Score=24.87 Aligned_cols=50 Identities=16% Similarity=0.284 Sum_probs=33.5
Q ss_pred CHHHHHHhhc---cCC---CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-----CCEEEEccccc
Q 015768 151 DADWLEKTLE---TKP---TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-----GSWLVVDNTYE 207 (400)
Q Consensus 151 ~~e~l~~~l~---~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-----~~~li~D~a~~ 207 (400)
+.+.+++.++ ... ..++|. +|.+.+.+.++.+.++++++ +..+++|-+.+
T Consensus 69 ~~~~i~~~l~~~~~~~~l~~~d~i~-------~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~ 129 (281)
T PRK08176 69 PDEWFSGYLRALQERDALRQLRAVT-------TGYMGSASQIKILAEWLTALRADHPDLLIMVDPVIG 129 (281)
T ss_pred CHHHHHHHHHHHHhcCccccCCEEE-------ECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCccc
Confidence 4555666654 221 356776 68888888888888888763 66777776643
No 485
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=32.11 E-value=2.2e+02 Score=25.56 Aligned_cols=59 Identities=15% Similarity=0.168 Sum_probs=38.5
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.+++.++ -.. +.+.+++. .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 11 Pf~~dg-~iD~~~~~~~i~~l~~~~Gv~gi~~~-GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 11 PFDENG-EINEDVLRAIVDYLIEKQGVDGLYVN-GSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred CCCCCC-CCCHHHHHHHHHHHHhcCCCCEEEEC-cCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 677666 689888888876 122 34666654 344445678888888888876653 355554
No 486
>PRK10206 putative oxidoreductase; Provisional
Probab=32.00 E-value=1.8e+02 Score=27.03 Aligned_cols=21 Identities=19% Similarity=0.088 Sum_probs=10.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEE
Q 015768 182 PERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~ 202 (400)
+.++.++|.++|+++|+.+.+
T Consensus 100 ~~~ea~~l~~~a~~~~~~l~v 120 (344)
T PRK10206 100 TLAEAKELFALAKSKGLTVTP 120 (344)
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 344455555555555555443
No 487
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=31.90 E-value=2.3e+02 Score=21.54 Aligned_cols=57 Identities=9% Similarity=0.120 Sum_probs=34.5
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
..++..|++++.. . .....+++.+...... +.+|.++.... ...+.++++++.+++.
T Consensus 21 ~~l~~~G~~vi~l-G-----~~vp~e~~~~~a~~~~-~d~V~iS~~~~-----~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 21 RALRDAGFEVIYT-G-----LRQTPEEIVEAAIQED-VDVIGLSSLSG-----GHMTLFPEVIELLREL 77 (122)
T ss_pred HHHHHCCCEEEEC-C-----CCCCHHHHHHHHHHcC-CCEEEEcccch-----hhHHHHHHHHHHHHhc
Confidence 4567889998876 2 2345666666555332 58888774322 2444567777766665
No 488
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=31.88 E-value=2.7e+02 Score=24.75 Aligned_cols=78 Identities=15% Similarity=0.131 Sum_probs=45.4
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEE
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+.....++..--+.+.- |.-...+ ..+.+++.+.. ..+++|-.. .|+- .-.+.+.+|.+.++..++++++
T Consensus 67 ~~Aa~vIKsYsPdLIVH-P~l~~~~--av~~i~k~L~R---lhavVIGPG---LGRdp~~~k~i~~iley~~~~dvP~VI 137 (306)
T KOG3974|consen 67 PEAAVVIKSYSPDLIVH-PVLDQEN--AVDIIEKLLQR---LHAVVIGPG---LGRDPAILKEIAKILEYLRGKDVPLVI 137 (306)
T ss_pred hhHHHHHhhcCCceeec-ccccCCc--hHhHHHHHHhh---eeEEEECCC---CCCCHHHHHHHHHHHHHHhcCCCcEEE
Confidence 34445556555444433 4333322 45666666653 256655421 3331 2344688999999999999999
Q ss_pred cccccccc
Q 015768 203 DNTYEYFM 210 (400)
Q Consensus 203 D~a~~~~~ 210 (400)
|.---++.
T Consensus 138 DaDGL~Lv 145 (306)
T KOG3974|consen 138 DADGLWLV 145 (306)
T ss_pred cCCceEeh
Confidence 98655443
No 489
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=31.81 E-value=4e+02 Score=24.24 Aligned_cols=131 Identities=15% Similarity=0.124 Sum_probs=74.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEe--CCCccchhHH--HHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 88 YKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMF--APYYFNSYMS--FQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 88 ~~~~i~~~~g~t~a~~~~~~~l~~~gd--~vlv~--~p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
-.++|++|.|.+.-+...+....++|. +|+|. .|.+.++..+ +...|++...+ | |. ++-+.+.+
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI-~--------da-aVfA~Msr 230 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVI-P--------DA-AVFAMMSR 230 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEe-c--------cH-HHHHHhhh
Confidence 367899999988888888877776653 45554 3444442222 23457776655 2 32 33344444
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc
Q 015768 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY 234 (400)
Q Consensus 162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 234 (400)
-. |+|+-++.--+-|-+....-...++..+++|-+++++=.-..- -.|......+...-++|.++.+
T Consensus 231 Vn--KVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp~yK----LsPlyp~~~ds~~~f~s~~~il 297 (353)
T KOG1465|consen 231 VN--KVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAPMYK----LSPLYPTNPDSFHEFRSPSEIL 297 (353)
T ss_pred cc--eEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecchhh----cCCCCCCCHHHHHhcCCccccc
Confidence 33 6776665544444455545577788888999999887443221 1222233333334455556655
No 490
>PRK11823 DNA repair protein RadA; Provisional
Probab=31.80 E-value=4.9e+02 Score=25.27 Aligned_cols=111 Identities=15% Similarity=0.105 Sum_probs=55.5
Q ss_pred CCCCCcEEEeCC------hHHHHHHHHHHhcCCCCEEEEeCCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHH
Q 015768 86 KLYKSSVMVTAG------ANQAFVNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEK 157 (400)
Q Consensus 86 ~~~~~~i~~~~g------~t~a~~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~ 157 (400)
|+.+..+++..| +|.++..+.. +.+.|.+|++....-.. ...-++..|...-.+ ....+ .+++.+.+
T Consensus 76 Gi~~Gs~~lI~G~pG~GKTtL~lq~a~~-~a~~g~~vlYvs~Ees~~qi~~ra~rlg~~~~~l-~~~~e---~~l~~i~~ 150 (446)
T PRK11823 76 GLVPGSVVLIGGDPGIGKSTLLLQVAAR-LAAAGGKVLYVSGEESASQIKLRAERLGLPSDNL-YLLAE---TNLEAILA 150 (446)
T ss_pred CccCCEEEEEECCCCCCHHHHHHHHHHH-HHhcCCeEEEEEccccHHHHHHHHHHcCCChhcE-EEeCC---CCHHHHHH
Confidence 566666666433 3334444443 33446666655443211 112234555421111 11111 25777777
Q ss_pred hhccCCCCeEEEEeCCCCCC-----ccCCCHH----HHHHHHHHHHHcCCEEEE
Q 015768 158 TLETKPTPKLVSVVNPGNPS-----GTYIPER----LLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~npt-----G~~~~~~----~l~~i~~l~~~~~~~li~ 202 (400)
.+.... +++|++.+.++.. +..-+.. .+.+|.++++++|+.++.
T Consensus 151 ~i~~~~-~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 151 TIEEEK-PDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred HHHhhC-CCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 776433 6888887665322 1111222 234678889999986554
No 491
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=31.75 E-value=1.7e+02 Score=26.80 Aligned_cols=79 Identities=19% Similarity=0.261 Sum_probs=43.3
Q ss_pred EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015768 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194 (400)
Q Consensus 115 ~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~ 194 (400)
.|+...|+- ++...++.+|+..+.- - .++.+++.++|.+++..-.....+++.|-.|. ++. .++..++++
T Consensus 98 ~vVAv~~g~-g~~~lf~~~Gv~~vi~--g-gqt~nPS~~dl~~Ai~~~~a~~VivLPNn~ni---~~a---a~qa~~~~~ 167 (313)
T PF13684_consen 98 GVVAVAPGE-GLAELFRSLGVDVVIS--G-GQTMNPSTEDLLNAIEKVGADEVIVLPNNKNI---ILA---AEQAARLSE 167 (313)
T ss_pred EEEEEecCc-cHHHHHHhCCCeEEEe--C-CCCCCCCHHHHHHHHHhCCCCeEEEEeCCchH---HHH---HHHHHHHhc
Confidence 455555543 5677778888765422 1 23346778888888775333466666543342 233 455555554
Q ss_pred HcCCEEEEcc
Q 015768 195 AAGSWLVVDN 204 (400)
Q Consensus 195 ~~~~~li~D~ 204 (400)
..+ ..+++.
T Consensus 168 ~~~-v~VipT 176 (313)
T PF13684_consen 168 DKN-VVVIPT 176 (313)
T ss_pred CCC-EEEEec
Confidence 444 444443
No 492
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=31.69 E-value=55 Score=29.35 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccC
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~ 212 (400)
+.++++++++.|+++|+.||.|-+.-.....
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~ 80 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHTSDD 80 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEEETT
T ss_pred hhhhhhhhhhccccccceEEEeeeccccccc
Confidence 4678999999999999999999987654443
No 493
>PF00248 Aldo_ket_red: Aldo/keto reductase family; InterPro: IPR023210 The aldo-keto reductase family includes a number of related monomeric NADPH-dependent oxidoreductases, such as aldehyde reductase, aldose reductase, prostaglandin F synthase, xylose reductase, rho crystallin, and many others []. All possess a similar structure, with a beta-alpha-beta fold characteristic of nucleotide binding proteins []. The fold comprises a parallel beta-8/alpha-8-barrel, which contains a novel NADP-binding motif. The binding site is located in a large, deep, elliptical pocket in the C-terminal end of the beta sheet, the substrate being bound in an extended conformation. The hydrophobic nature of the pocket favours aromatic and apolar substrates over highly polar ones []. Binding of the NADPH coenzyme causes a massive conformational change, reorienting a loop, effectively locking the coenzyme in place. This binding is more similar to FAD- than to NAD(P)-binding oxidoreductases []. Some proteins of this entry contain a K+ ion channel beta chain regulatory domain; these are reported to have oxidoreductase activity []. This entry represents the NADP-dependent oxidoreductase domain found in these proteins.; PDB: 1C9W_A 4F40_B 1VBJ_A 1XGD_A 1X97_A 2ACS_A 1EF3_A 2ACU_A 1PWM_A 2NVD_A ....
Probab=31.67 E-value=3.4e+02 Score=23.98 Aligned_cols=150 Identities=14% Similarity=0.140 Sum_probs=74.9
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCC--CcHHHHHHHHHHHHhhcCCCCCcEEEeCC-----------hHHHHH-HHHHHhc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADE--GLPELRDALVKKLNQENKLYKSSVMVTAG-----------ANQAFV-NIVLTLC 110 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~--g~~~~~~~~a~~l~~~~~~~~~~i~~~~g-----------~t~a~~-~~~~~l~ 110 (400)
...+.+.+..+++.+ ...+.... +.-.-++.+.+++.+ ...+.+++++++= ....+. .+-.++.
T Consensus 16 ~~~~~~~l~~a~~~G-in~~DtA~~Y~~g~sE~~lg~~l~~-~~~~r~~~~i~tK~~~~~~~~~~~~~~~i~~~~~~sL~ 93 (283)
T PF00248_consen 16 EEEAEAILRRALEAG-INFFDTADSYGNGRSERILGRALRK-SRVPRDDIFISTKVYGDGKPEPDYSPDSIRESLERSLE 93 (283)
T ss_dssp HHHHHHHHHHHHHTT---EEEECGGGGGGTHHHHHHHHHHH-TSSTGGGSEEEEEEESSSSTGGGSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCeeccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 455555666666654 22121111 112344557777765 2334555555321 122222 2222232
Q ss_pred ----CCCCEEEEeCCCccch-h-------HHHHhcCc-EEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC
Q 015768 111 ----DAGDSVVMFAPYYFNS-Y-------MSFQMTGV-THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS 177 (400)
Q Consensus 111 ----~~gd~vlv~~p~~~~~-~-------~~~~~~g~-~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt 177 (400)
..=|-+++..|..... . ..++..|. +.+-+ - +.+.+.++.+..... ++..++..+.|+.
T Consensus 94 ~L~~d~iDl~~lH~~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s------~~~~~~l~~~~~~~~-~~~~~~q~~~n~~ 165 (283)
T PF00248_consen 94 RLGTDYIDLLLLHWPDPSEDALEEVWEALEELKKEGKIRHIGV-S------NFSPEQLEAALKIGS-IPPDVVQINYNLL 165 (283)
T ss_dssp HHTSSSEEEEEESSSSTTSSHHHHHHHHHHHHHHTTSEEEEEE-E------S--HHHHHHHHTCTS-S-ESEEEEE-BTT
T ss_pred cccccchhccccccccccccccchhhhhhhhcccccccccccc-c------ccccccccccccccc-ccccccccccccc
Confidence 2237788888887554 1 22344553 44444 1 235777877744322 4555555556655
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccc
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEY 208 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~ 208 (400)
.......+.+.|+++|+-++.=.....
T Consensus 166 ----~~~~~~~l~~~~~~~gi~v~a~~~l~~ 192 (283)
T PF00248_consen 166 ----NRREEEGLLEFCREHGIGVIAYSPLAG 192 (283)
T ss_dssp ----BHBGGHHHHHHHHHTT-EEEEESTTGG
T ss_pred ----ccccccccccccccccccccccccccc
Confidence 333378889999999999996555543
No 494
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=31.59 E-value=90 Score=24.15 Aligned_cols=40 Identities=18% Similarity=0.137 Sum_probs=21.8
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
+.+++.++.++ -+++++.... . -..+.++|++++++++.=
T Consensus 72 ~~l~~l~~~~~--P~iIvt~~~~-----~----p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 72 ERLEKLFSYNP--PCIIVTRGLE-----P----PPELIELAEKYNIPLLRT 111 (127)
T ss_dssp CHHHHHCTTT---S-EEEETTT------------HHHHHHHHHCT--EEEE
T ss_pred HHHHHHhCCCC--CEEEEECcCC-----C----CHHHHHHHHHhCCcEEEc
Confidence 34555555554 5666664332 2 477788888999998753
No 495
>PRK09354 recA recombinase A; Provisional
Probab=31.45 E-value=3e+02 Score=25.67 Aligned_cols=112 Identities=12% Similarity=0.137 Sum_probs=56.1
Q ss_pred CCCCCcEEEeC-----C-hHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcE---EEEeccCCCCCCCCCHHHHH
Q 015768 86 KLYKSSVMVTA-----G-ANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT---HILVGPCSSKTLHPDADWLE 156 (400)
Q Consensus 86 ~~~~~~i~~~~-----g-~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~e~l~ 156 (400)
|++...++... | +|-++..+..+. +.|..++..+..+..-...++..|.+ ++...|.. + .--++.++
T Consensus 56 Gip~G~IteI~G~~GsGKTtLal~~~~~~~-~~G~~~~yId~E~s~~~~~a~~lGvdld~lli~qp~~--~-Eq~l~i~~ 131 (349)
T PRK09354 56 GLPRGRIVEIYGPESSGKTTLALHAIAEAQ-KAGGTAAFIDAEHALDPVYAKKLGVDIDNLLVSQPDT--G-EQALEIAD 131 (349)
T ss_pred CCcCCeEEEEECCCCCCHHHHHHHHHHHHH-HcCCcEEEECCccchHHHHHHHcCCCHHHeEEecCCC--H-HHHHHHHH
Confidence 56666665432 2 444455544444 34666666666665555667777763 22221111 1 11133344
Q ss_pred HhhccCCCCeEEEEeCCCCCC------ccCCC-----H-----HHHHHHHHHHHHcCCEEEE
Q 015768 157 KTLETKPTPKLVSVVNPGNPS------GTYIP-----E-----RLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~npt------G~~~~-----~-----~~l~~i~~l~~~~~~~li~ 202 (400)
.++... .+++|++-+..... |..-+ . ..++.|..+++++|+.+|+
T Consensus 132 ~li~s~-~~~lIVIDSvaaL~~~~E~eg~~gd~~~~~qar~ms~~Lr~L~~~l~k~~itvI~ 192 (349)
T PRK09354 132 TLVRSG-AVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNISKSNTTVIF 192 (349)
T ss_pred HHhhcC-CCCEEEEeChhhhcchhhhcCCccccchhHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence 444332 36777777654322 11100 1 1256677777888877664
No 496
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=31.37 E-value=4.3e+02 Score=25.31 Aligned_cols=97 Identities=20% Similarity=0.211 Sum_probs=54.5
Q ss_pred CcEEEeCChHHHHHHHH-HHhc--------CCCCEEEEeCCCccchh-----H----HHHhcCcEEEEeccCCCCCCCCC
Q 015768 90 SSVMVTAGANQAFVNIV-LTLC--------DAGDSVVMFAPYYFNSY-----M----SFQMTGVTHILVGPCSSKTLHPD 151 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~-~~l~--------~~gd~vlv~~p~~~~~~-----~----~~~~~g~~~~~~~~~~~~~~~~~ 151 (400)
+-|++++|++......+ +... ++||.|++..+..++.. . .+...|+++.. ...-.| ..+
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~h~Sg-Ha~ 363 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIK--RIHVSG-HAS 363 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEe--ceEecC-CCC
Confidence 45666666543333333 3322 37799999987777655 1 23346776543 222333 457
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (400)
.++|...++.-. |+-++-.+.. ...+...++++++.|+
T Consensus 364 ~~dl~~~i~~~~-Pk~~ipvHge--------~~~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 364 QEDHKLLLRLLK-PKYIIPVHGE--------YRMLINHTKLAEEEGY 401 (422)
T ss_pred HHHHHHHHHHhC-CCEEEecCCc--------HHHHHHHHHHHHHcCC
Confidence 788888776332 5766644322 2237777777776654
No 497
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=31.06 E-value=1.2e+02 Score=23.35 Aligned_cols=45 Identities=18% Similarity=0.313 Sum_probs=23.6
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccC-CCHHHH---HHHHHHHHHcCCEE
Q 015768 153 DWLEKTLETKPTPKLVSVVNPGNPSGTY-IPERLL---KRISDLCKAAGSWL 200 (400)
Q Consensus 153 e~l~~~l~~~~~~~~v~l~~p~nptG~~-~~~~~l---~~i~~l~~~~~~~l 200 (400)
+-++.++..+. ..+++.+ |.|+|.. ++.+++ ++|.+.|+.-++.+
T Consensus 55 ~I~~~al~~~A--~~vIl~H-NHPsG~~~PS~~D~~~T~~L~~~~~~l~I~l 103 (123)
T PF04002_consen 55 EIFRRALRLNA--SSVILAH-NHPSGDPEPSDADIALTRRLKKAARLLGIEL 103 (123)
T ss_dssp HHHHHHHHTT---SEEEEEE-E-TTS--S--HHHHHHHHHHHHHHHHHT-EE
T ss_pred HHHHHHHhhCC--ceEEEEE-EcCCCCCCCCHhHHHHHHHHHHHHHHcCCee
Confidence 44556666554 4555542 4577765 455555 77888888777654
No 498
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=30.87 E-value=1.1e+02 Score=27.94 Aligned_cols=25 Identities=16% Similarity=0.396 Sum_probs=22.1
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|-.++.+++++|.+.|+++||-||-
T Consensus 62 ~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 62 GLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred CCccCHHHHHHHHHHHHHcCCEEEE
Confidence 5568999999999999999998774
No 499
>KOG0384 consensus Chromodomain-helicase DNA-binding protein [Transcription]
Probab=30.86 E-value=1.7e+02 Score=31.97 Aligned_cols=86 Identities=13% Similarity=0.143 Sum_probs=53.4
Q ss_pred HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCC--cHHHHHHHHHHHHhhcCCC-CCcEEEe---CCh
Q 015768 25 LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEG--LPELRDALVKKLNQENKLY-KSSVMVT---AGA 98 (400)
Q Consensus 25 ~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g--~~~~~~~~a~~l~~~~~~~-~~~i~~~---~g~ 98 (400)
+.++|+.++.||+- -.+++-+.+++... ...|..-.| ..++|++.-+++ +.+ .++++|. ..|
T Consensus 695 Lk~~GHrVLIFSQM-------VRmLDIL~eYL~~r-~ypfQRLDGsvrgelRq~AIDhF----nap~SddFvFLLSTRAG 762 (1373)
T KOG0384|consen 695 LKEGGHRVLIFSQM-------VRMLDILAEYLSLR-GYPFQRLDGSVRGELRQQAIDHF----NAPDSDDFVFLLSTRAG 762 (1373)
T ss_pred HhcCCceEEEhHHH-------HHHHHHHHHHHHHc-CCcceeccCCcchHHHHHHHHhc----cCCCCCceEEEEecccC
Confidence 45778888888885 56777777777643 223332222 356777777776 544 4555553 223
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCccchhH
Q 015768 99 NQAFVNIVLTLCDAGDSVVMFAPYYFNSYM 128 (400)
Q Consensus 99 t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~ 128 (400)
-.+|+++ .-|+|++++..|++.-+
T Consensus 763 GLGINLa------tADTVIIFDSDWNPQND 786 (1373)
T KOG0384|consen 763 GLGINLA------TADTVIIFDSDWNPQND 786 (1373)
T ss_pred ccccccc------ccceEEEeCCCCCcchH
Confidence 3445433 24899999999977553
No 500
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=30.86 E-value=1.9e+02 Score=26.01 Aligned_cols=53 Identities=15% Similarity=0.167 Sum_probs=35.1
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.+++| .+|.+.+++.++. ..+.+.+++. .++--+..++.+|..++.+.+.+.
T Consensus 9 Pf~~~g-~iD~~~~~~~i~~l~~~Gv~Gi~~~-GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 9 PFKEDG-SVDFAALEKLIDFQIENGTDAIVVV-GTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccCcccccCCHHHHHHHHHHHHHH
Confidence 666665 6888888887761 2335666643 344445678888888888876653
Done!