Query 015768
Match_columns 400
No_of_seqs 143 out of 2152
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 18:20:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b5p_A Protein (aspartate amin 100.0 3.8E-50 1.3E-54 378.9 39.1 368 7-384 4-383 (385)
2 1gd9_A Aspartate aminotransfer 100.0 1.1E-48 3.6E-53 369.6 41.1 373 5-386 1-386 (389)
3 1j32_A Aspartate aminotransfer 100.0 1E-48 3.4E-53 369.6 38.6 374 5-386 1-387 (388)
4 3h14_A Aminotransferase, class 100.0 1.4E-48 4.8E-53 369.0 38.7 361 20-392 21-388 (391)
5 3jtx_A Aminotransferase; NP_28 100.0 2.8E-48 9.4E-53 367.6 38.7 362 8-383 3-395 (396)
6 2x5d_A Probable aminotransfera 100.0 4.3E-48 1.5E-52 368.1 37.5 376 5-388 8-400 (412)
7 2o1b_A Aminotransferase, class 100.0 1.4E-48 4.9E-53 370.3 31.8 370 8-386 23-403 (404)
8 3fvs_A Kynurenine--oxoglutarat 100.0 5.1E-48 1.8E-52 368.8 34.8 372 5-385 4-421 (422)
9 3aow_A Putative uncharacterize 100.0 1.2E-47 4.1E-52 368.2 37.4 372 7-388 54-447 (448)
10 1u08_A Hypothetical aminotrans 100.0 1.7E-47 6E-52 360.9 37.3 365 7-381 8-385 (386)
11 3ele_A Amino transferase; RER0 100.0 2.2E-47 7.4E-52 361.7 37.9 370 5-387 2-397 (398)
12 3b46_A Aminotransferase BNA3; 100.0 1.1E-47 3.8E-52 368.9 35.0 360 14-381 33-442 (447)
13 2o0r_A RV0858C (N-succinyldiam 100.0 8.2E-48 2.8E-52 366.1 32.1 374 5-388 1-398 (411)
14 3nra_A Aspartate aminotransfer 100.0 1.9E-47 6.5E-52 363.1 34.5 350 31-387 40-406 (407)
15 1o4s_A Aspartate aminotransfer 100.0 7.6E-47 2.6E-51 356.8 38.0 363 7-384 14-387 (389)
16 1yiz_A Kynurenine aminotransfe 100.0 2.3E-47 7.9E-52 365.1 34.1 369 7-384 15-427 (429)
17 2dou_A Probable N-succinyldiam 100.0 3.8E-47 1.3E-51 357.3 34.8 345 27-383 22-375 (376)
18 3fdb_A Beta C-S lyase, putativ 100.0 5.6E-47 1.9E-51 356.2 34.1 347 27-386 20-376 (377)
19 3kax_A Aminotransferase, class 100.0 2.6E-46 8.8E-51 352.4 37.8 347 28-383 22-382 (383)
20 3dzz_A Putative pyridoxal 5'-p 100.0 1.2E-46 4.2E-51 355.5 35.6 350 28-386 25-389 (391)
21 1xi9_A Putative transaminase; 100.0 9E-47 3.1E-51 358.3 34.8 372 7-387 12-404 (406)
22 1v2d_A Glutamine aminotransfer 100.0 1.5E-46 5.1E-51 353.9 33.9 363 5-388 1-373 (381)
23 2z61_A Probable aspartate amin 100.0 5.8E-46 2E-50 348.4 37.0 354 8-384 3-369 (370)
24 3ezs_A Aminotransferase ASPB; 100.0 4.5E-46 1.5E-50 350.0 35.6 346 17-385 7-374 (376)
25 1c7n_A Cystalysin; transferase 100.0 3.7E-46 1.3E-50 353.3 35.0 352 30-389 31-396 (399)
26 3e2y_A Kynurenine-oxoglutarate 100.0 2E-46 6.8E-51 356.4 32.9 365 8-381 2-408 (410)
27 2gb3_A Aspartate aminotransfer 100.0 2.1E-45 7.1E-50 349.3 39.5 370 7-389 16-405 (409)
28 3dyd_A Tyrosine aminotransfera 100.0 7.3E-46 2.5E-50 354.2 35.9 353 29-387 53-425 (427)
29 4dq6_A Putative pyridoxal phos 100.0 3.6E-45 1.2E-49 345.5 38.5 355 18-383 21-390 (391)
30 1d2f_A MALY protein; aminotran 100.0 2.1E-45 7.2E-50 347.1 36.1 348 30-386 28-389 (390)
31 2zc0_A Alanine glyoxylate tran 100.0 4.8E-45 1.6E-49 346.6 38.7 373 7-388 7-406 (407)
32 3l8a_A METC, putative aminotra 100.0 5.9E-46 2E-50 354.3 32.5 347 29-384 60-420 (421)
33 1vp4_A Aminotransferase, putat 100.0 6.6E-46 2.2E-50 354.4 31.0 373 7-389 21-421 (425)
34 3g0t_A Putative aminotransfera 100.0 7.6E-46 2.6E-50 355.4 30.5 349 27-385 41-436 (437)
35 2r2n_A Kynurenine/alpha-aminoa 100.0 2.8E-45 9.6E-50 350.0 32.7 365 7-386 7-424 (425)
36 1bw0_A TAT, protein (tyrosine 100.0 1.1E-44 3.8E-49 345.1 36.1 355 29-388 32-415 (416)
37 2zyj_A Alpha-aminodipate amino 100.0 6.2E-45 2.1E-49 344.7 33.5 366 7-387 10-394 (397)
38 3ly1_A Putative histidinol-pho 100.0 3.7E-44 1.3E-48 334.1 35.0 334 27-385 13-351 (354)
39 3euc_A Histidinol-phosphate am 100.0 4.8E-44 1.6E-48 335.0 34.8 332 29-384 29-366 (367)
40 3get_A Histidinol-phosphate am 100.0 3.8E-44 1.3E-48 335.5 33.9 330 28-383 28-364 (365)
41 3ffh_A Histidinol-phosphate am 100.0 1E-43 3.5E-48 332.3 36.7 329 28-382 30-362 (363)
42 2x5f_A Aspartate_tyrosine_phen 100.0 6.8E-45 2.3E-49 348.0 29.3 346 29-386 46-429 (430)
43 3qgu_A LL-diaminopimelate amin 100.0 3.6E-44 1.2E-48 344.9 34.0 342 29-386 68-440 (449)
44 3ei9_A LL-diaminopimelate amin 100.0 5.4E-44 1.8E-48 342.0 34.8 344 28-384 54-426 (432)
45 3k7y_A Aspartate aminotransfer 100.0 4.2E-44 1.4E-48 337.5 31.9 357 9-385 6-404 (405)
46 3op7_A Aminotransferase class 100.0 1.3E-43 4.5E-48 333.1 34.2 326 51-388 47-373 (375)
47 3tcm_A Alanine aminotransferas 100.0 1.4E-43 4.9E-48 344.2 35.2 342 44-388 107-496 (500)
48 3d6k_A Putative aminotransfera 100.0 2E-44 6.7E-49 343.8 28.5 366 7-388 10-420 (422)
49 1iay_A ACC synthase 2, 1-amino 100.0 2.5E-43 8.4E-48 337.0 33.9 363 16-385 15-426 (428)
50 3ihj_A Alanine aminotransferas 100.0 5E-43 1.7E-47 339.8 35.7 338 45-388 103-495 (498)
51 4f4e_A Aromatic-amino-acid ami 100.0 2.2E-43 7.7E-48 336.4 30.9 364 5-383 22-419 (420)
52 3asa_A LL-diaminopimelate amin 100.0 1.7E-43 5.8E-48 335.1 29.5 341 28-387 31-394 (400)
53 1fg7_A Histidinol phosphate am 100.0 1.1E-42 3.9E-47 324.3 34.3 321 30-381 29-353 (356)
54 3rq1_A Aminotransferase class 100.0 7.2E-43 2.5E-47 332.8 33.5 342 29-387 37-416 (418)
55 3piu_A 1-aminocyclopropane-1-c 100.0 1.1E-42 3.8E-47 333.2 35.0 351 30-387 38-433 (435)
56 1lc5_A COBD, L-threonine-O-3-p 100.0 2.9E-42 9.9E-47 322.6 36.3 333 28-386 22-360 (364)
57 3ftb_A Histidinol-phosphate am 100.0 4.9E-42 1.7E-46 320.6 36.9 330 27-384 23-359 (361)
58 3t18_A Aminotransferase class 100.0 1.2E-42 3.9E-47 330.9 31.7 339 29-388 36-412 (413)
59 3ppl_A Aspartate aminotransfer 100.0 5.7E-43 2E-47 334.4 29.4 350 24-388 27-422 (427)
60 3g7q_A Valine-pyruvate aminotr 100.0 1.4E-42 4.9E-47 330.6 31.1 359 20-389 19-416 (417)
61 3hdo_A Histidinol-phosphate am 100.0 4.5E-41 1.5E-45 314.0 38.3 329 28-385 24-354 (360)
62 3ez1_A Aminotransferase MOCR f 100.0 1.2E-42 4.3E-47 331.6 27.7 358 17-389 13-418 (423)
63 1yaa_A Aspartate aminotransfer 100.0 5.3E-42 1.8E-46 326.2 30.5 361 8-385 5-410 (412)
64 3if2_A Aminotransferase; YP_26 100.0 6.9E-42 2.4E-46 328.5 31.3 353 28-389 29-443 (444)
65 3fsl_A Aromatic-amino-acid ami 100.0 9.5E-42 3.2E-46 322.8 31.7 355 14-383 8-397 (397)
66 3p1t_A Putative histidinol-pho 100.0 8.8E-41 3E-45 309.1 36.4 323 26-383 12-334 (337)
67 3f6t_A Aspartate aminotransfer 100.0 3.7E-42 1.3E-46 336.3 27.7 348 31-389 104-528 (533)
68 3b1d_A Betac-S lyase; HET: PLP 100.0 4.9E-46 1.7E-50 351.7 0.0 346 30-384 31-391 (392)
69 4eu1_A Mitochondrial aspartate 100.0 8.6E-42 3E-46 324.4 28.4 360 6-383 15-408 (409)
70 7aat_A Aspartate aminotransfer 100.0 3.1E-41 1E-45 319.8 31.2 339 30-383 28-400 (401)
71 3meb_A Aspartate aminotransfer 100.0 2.1E-41 7.3E-46 325.0 30.5 362 5-385 22-443 (448)
72 1ajs_A Aspartate aminotransfer 100.0 4.1E-41 1.4E-45 320.1 31.5 360 9-386 7-411 (412)
73 3fkd_A L-threonine-O-3-phospha 100.0 5E-41 1.7E-45 312.5 30.7 325 28-386 13-342 (350)
74 3cq5_A Histidinol-phosphate am 100.0 6.9E-40 2.3E-44 307.0 37.1 328 32-384 32-366 (369)
75 2q7w_A Aspartate aminotransfer 100.0 2.9E-41 1E-45 319.3 26.4 338 29-383 25-396 (396)
76 2zy4_A L-aspartate beta-decarb 100.0 4.4E-41 1.5E-45 328.7 28.2 361 17-388 82-524 (546)
77 2ay1_A Aroat, aromatic amino a 100.0 2.8E-40 9.7E-45 312.4 27.4 353 12-382 6-392 (394)
78 1uu1_A Histidinol-phosphate am 100.0 1.2E-39 4.2E-44 301.2 29.4 316 30-382 19-334 (335)
79 3bwn_A AT1G70560, L-tryptophan 100.0 1.1E-40 3.9E-45 314.3 19.5 327 28-385 20-386 (391)
80 3a2b_A Serine palmitoyltransfe 100.0 1.9E-38 6.5E-43 300.3 30.8 336 28-386 41-392 (398)
81 4h51_A Aspartate aminotransfer 100.0 6.1E-38 2.1E-42 295.5 33.8 368 5-388 15-419 (420)
82 2hox_A ALLIIN lyase 1; cystein 100.0 6.2E-40 2.1E-44 312.4 20.5 327 30-385 56-424 (427)
83 2dr1_A PH1308 protein, 386AA l 100.0 7.8E-37 2.7E-41 287.8 32.8 324 43-387 30-380 (386)
84 1vjo_A Alanine--glyoxylate ami 100.0 8.8E-37 3E-41 288.3 30.6 321 41-383 42-392 (393)
85 1t3i_A Probable cysteine desul 100.0 5.1E-37 1.7E-41 292.4 26.6 351 17-390 8-417 (420)
86 1eg5_A Aminotransferase; PLP-d 100.0 2E-36 6.9E-41 284.7 25.6 332 33-388 3-378 (384)
87 2w8t_A SPT, serine palmitoyltr 100.0 1.3E-35 4.6E-40 283.2 28.5 343 28-392 62-421 (427)
88 3tqx_A 2-amino-3-ketobutyrate 100.0 5.5E-36 1.9E-40 283.3 25.5 337 29-386 42-396 (399)
89 1iug_A Putative aspartate amin 100.0 1.3E-35 4.5E-40 275.9 26.8 322 41-388 9-350 (352)
90 2z9v_A Aspartate aminotransfer 100.0 1.8E-35 6.1E-40 279.2 28.1 336 31-387 8-372 (392)
91 1kmj_A Selenocysteine lyase; p 100.0 6.6E-35 2.2E-39 276.5 32.0 334 29-386 21-405 (406)
92 1bs0_A Protein (8-amino-7-oxon 100.0 1.4E-35 4.9E-40 279.1 27.3 329 28-382 37-383 (384)
93 3f9t_A TDC, L-tyrosine decarbo 100.0 6.6E-35 2.3E-39 275.4 30.9 320 42-384 40-396 (397)
94 2huf_A Alanine glyoxylate amin 100.0 1.1E-34 3.6E-39 274.0 32.2 332 32-388 20-385 (393)
95 1svv_A Threonine aldolase; str 100.0 3.6E-35 1.2E-39 273.7 27.6 333 29-386 12-358 (359)
96 3lvm_A Cysteine desulfurase; s 100.0 2.1E-35 7.3E-40 281.6 26.2 342 27-389 18-402 (423)
97 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 8.5E-37 2.9E-41 286.1 15.6 330 29-386 6-370 (371)
98 3nnk_A Ureidoglycine-glyoxylat 100.0 2E-34 7E-39 273.6 32.2 326 41-388 21-392 (411)
99 3cai_A Possible aminotransfera 100.0 3.6E-35 1.2E-39 278.5 26.8 342 21-381 15-404 (406)
100 3zrp_A Serine-pyruvate aminotr 100.0 1.4E-34 5E-39 272.1 30.5 323 42-389 11-366 (384)
101 4eb5_A Probable cysteine desul 100.0 2.4E-35 8E-40 277.3 25.0 325 43-388 11-375 (382)
102 2ch1_A 3-hydroxykynurenine tra 100.0 5E-35 1.7E-39 276.5 27.3 327 38-388 23-385 (396)
103 1fc4_A 2-amino-3-ketobutyrate 100.0 3.7E-35 1.3E-39 278.0 25.2 331 28-386 43-397 (401)
104 3isl_A Purine catabolism prote 100.0 3.1E-34 1E-38 272.9 30.9 324 43-388 21-392 (416)
105 3kgw_A Alanine-glyoxylate amin 100.0 2.4E-34 8.3E-39 271.4 29.9 326 41-388 31-390 (393)
106 1elu_A L-cysteine/L-cystine C- 100.0 1.2E-35 4.1E-40 280.1 20.7 337 22-381 7-387 (390)
107 4hvk_A Probable cysteine desul 100.0 4.7E-35 1.6E-39 275.0 24.6 326 43-389 11-376 (382)
108 1m32_A 2-aminoethylphosphonate 100.0 8.4E-35 2.9E-39 271.8 26.1 329 32-385 5-364 (366)
109 1e5e_A MGL, methionine gamma-l 100.0 2.8E-34 9.5E-39 271.7 29.9 326 24-388 11-397 (404)
110 2bwn_A 5-aminolevulinate synth 100.0 6E-35 2E-39 276.5 25.0 332 29-385 45-399 (401)
111 3ruy_A Ornithine aminotransfer 100.0 3E-35 1E-39 277.7 22.9 327 28-383 34-391 (392)
112 1v72_A Aldolase; PLP-dependent 100.0 7.5E-34 2.6E-38 264.5 29.8 332 29-387 6-354 (356)
113 2dkj_A Serine hydroxymethyltra 100.0 3.8E-34 1.3E-38 271.5 28.3 352 16-385 9-387 (407)
114 1sff_A 4-aminobutyrate aminotr 100.0 2.5E-35 8.4E-40 281.4 20.2 344 28-387 39-425 (426)
115 3i4j_A Aminotransferase, class 100.0 2.7E-34 9.2E-39 274.5 25.8 349 28-386 27-428 (430)
116 3kki_A CAI-1 autoinducer synth 100.0 9.6E-34 3.3E-38 269.0 28.2 329 28-385 57-403 (409)
117 3nx3_A Acoat, acetylornithine 100.0 1.3E-33 4.5E-38 266.8 28.8 333 28-385 34-394 (395)
118 4adb_A Succinylornithine trans 100.0 5.8E-34 2E-38 270.1 25.7 335 27-389 36-403 (406)
119 2yrr_A Aminotransferase, class 100.0 1E-33 3.5E-38 263.1 25.6 319 41-385 8-352 (353)
120 1jg8_A L-ALLO-threonine aldola 100.0 7.5E-34 2.5E-38 263.7 24.4 330 29-386 2-346 (347)
121 2eo5_A 419AA long hypothetical 100.0 8.5E-34 2.9E-38 270.0 25.3 333 28-386 40-418 (419)
122 3gju_A Putative aminotransfera 100.0 3E-33 1E-37 269.4 28.1 350 28-388 49-458 (460)
123 2eh6_A Acoat, acetylornithine 100.0 7.1E-34 2.4E-38 266.7 23.0 321 28-383 26-375 (375)
124 2ord_A Acoat, acetylornithine 100.0 3.6E-34 1.2E-38 270.8 20.3 328 28-385 38-396 (397)
125 1s0a_A Adenosylmethionine-8-am 100.0 4.9E-33 1.7E-37 265.7 27.7 340 28-386 41-424 (429)
126 3f0h_A Aminotransferase; RER07 100.0 6E-33 2.1E-37 260.4 27.3 320 42-385 28-373 (376)
127 4a6r_A Omega transaminase; tra 100.0 5.1E-33 1.7E-37 267.7 27.2 349 27-388 47-451 (459)
128 3vax_A Putative uncharacterize 100.0 2.6E-34 8.9E-39 272.0 17.9 337 28-385 17-399 (400)
129 2aeu_A Hypothetical protein MJ 100.0 2.3E-32 7.8E-37 256.0 30.5 335 19-387 15-372 (374)
130 3dxv_A Alpha-amino-epsilon-cap 100.0 1.6E-33 5.6E-38 269.8 23.2 348 27-388 40-427 (439)
131 2bkw_A Alanine-glyoxylate amin 100.0 5.6E-33 1.9E-37 261.3 25.9 329 30-385 4-383 (385)
132 1zod_A DGD, 2,2-dialkylglycine 100.0 1.2E-33 4.1E-38 270.3 21.4 346 28-386 41-432 (433)
133 2pb2_A Acetylornithine/succiny 100.0 3.9E-33 1.3E-37 265.4 24.8 333 27-387 54-419 (420)
134 1b9h_A AHBA synthase, protein 100.0 3.4E-32 1.2E-36 256.5 30.6 322 38-385 5-387 (388)
135 3a9z_A Selenocysteine lyase; P 100.0 1.8E-33 6.3E-38 268.9 21.0 339 29-388 16-430 (432)
136 4ffc_A 4-aminobutyrate aminotr 100.0 1.1E-33 3.8E-38 271.5 19.5 349 27-388 61-451 (453)
137 3ffr_A Phosphoserine aminotran 100.0 2.1E-32 7.4E-37 255.1 27.5 327 31-383 4-361 (362)
138 2oga_A Transaminase; PLP-depen 100.0 8.7E-33 3E-37 261.5 25.1 327 30-387 30-397 (399)
139 1rv3_A Serine hydroxymethyltra 100.0 1.2E-32 4.1E-37 266.1 26.2 362 8-385 22-430 (483)
140 1vef_A Acetylornithine/acetyl- 100.0 4.1E-33 1.4E-37 263.4 22.4 335 28-383 43-394 (395)
141 3n5m_A Adenosylmethionine-8-am 100.0 5.4E-33 1.9E-37 267.1 23.2 347 27-385 46-451 (452)
142 1z7d_A Ornithine aminotransfer 100.0 1.1E-32 3.7E-37 263.3 25.0 332 28-387 63-430 (433)
143 2rfv_A Methionine gamma-lyase; 100.0 2.4E-32 8.2E-37 258.3 27.0 319 33-381 23-395 (398)
144 3dod_A Adenosylmethionine-8-am 100.0 2.6E-32 8.8E-37 262.0 25.7 346 27-388 41-445 (448)
145 2po3_A 4-dehydrase; external a 100.0 7E-31 2.4E-35 250.4 33.7 331 28-387 12-387 (424)
146 2oat_A Ornithine aminotransfer 100.0 1.1E-31 3.8E-36 256.6 27.5 329 28-385 74-438 (439)
147 3n0l_A Serine hydroxymethyltra 100.0 3.7E-31 1.3E-35 251.7 31.0 358 10-386 5-389 (417)
148 2c81_A Glutamine-2-deoxy-scyll 100.0 1.1E-30 3.6E-35 248.7 33.0 328 37-386 6-414 (418)
149 3mc6_A Sphingosine-1-phosphate 100.0 2.9E-31 9.9E-36 258.2 29.3 329 43-389 75-440 (497)
150 3tfu_A Adenosylmethionine-8-am 100.0 2.8E-32 9.5E-37 261.8 21.8 341 28-387 71-454 (457)
151 3oks_A 4-aminobutyrate transam 100.0 6.9E-32 2.4E-36 259.0 24.0 344 27-385 58-450 (451)
152 3l44_A Glutamate-1-semialdehyd 100.0 7.2E-32 2.5E-36 258.0 23.6 341 27-388 52-432 (434)
153 2dgk_A GAD-beta, GADB, glutama 100.0 2.2E-30 7.5E-35 248.9 33.8 333 43-389 53-437 (452)
154 3hmu_A Aminotransferase, class 100.0 1.2E-31 4E-36 258.3 24.9 344 27-387 52-453 (472)
155 1mdo_A ARNB aminotransferase; 100.0 6.6E-31 2.3E-35 248.0 29.3 320 31-386 9-386 (393)
156 1ibj_A CBL, cystathionine beta 100.0 4.2E-32 1.4E-36 260.0 21.2 328 30-385 89-461 (464)
157 3i5t_A Aminotransferase; pyrid 100.0 1.5E-31 5E-36 258.0 25.1 347 27-388 51-456 (476)
158 3a8u_X Omega-amino acid--pyruv 100.0 1E-31 3.5E-36 258.1 23.8 340 28-386 48-447 (449)
159 2ez2_A Beta-tyrosinase, tyrosi 100.0 5E-31 1.7E-35 253.8 28.4 335 30-387 42-432 (456)
160 1qz9_A Kynureninase; kynurenin 100.0 1.4E-31 4.8E-36 254.6 23.6 335 22-387 19-403 (416)
161 2vi8_A Serine hydroxymethyltra 100.0 3.6E-31 1.2E-35 250.8 26.1 349 18-387 11-388 (405)
162 3mad_A Sphingosine-1-phosphate 100.0 7.4E-31 2.5E-35 256.2 28.9 309 62-389 129-472 (514)
163 3h7f_A Serine hydroxymethyltra 100.0 1.2E-30 4.1E-35 250.2 29.7 361 9-387 24-415 (447)
164 3ecd_A Serine hydroxymethyltra 100.0 1.9E-30 6.7E-35 247.3 30.2 360 9-386 11-397 (425)
165 3k28_A Glutamate-1-semialdehyd 100.0 1.2E-31 3.9E-36 256.1 19.4 338 27-386 50-427 (429)
166 2c0r_A PSAT, phosphoserine ami 100.0 3.4E-31 1.2E-35 247.2 21.7 324 32-386 5-361 (362)
167 1ax4_A Tryptophanase; tryptoph 100.0 1E-30 3.5E-35 252.4 25.3 326 46-387 55-442 (467)
168 2fnu_A Aminotransferase; prote 100.0 9.6E-30 3.3E-34 238.4 30.9 313 43-386 10-372 (375)
169 3ndn_A O-succinylhomoserine su 100.0 4.3E-30 1.5E-34 243.0 28.2 287 68-383 77-413 (414)
170 1w23_A Phosphoserine aminotran 100.0 1.4E-31 4.8E-36 249.6 17.8 325 31-385 3-359 (360)
171 3gbx_A Serine hydroxymethyltra 100.0 1.3E-30 4.3E-35 248.2 24.3 358 13-387 13-397 (420)
172 3fq8_A Glutamate-1-semialdehyd 100.0 3E-30 1E-34 246.3 26.6 332 27-385 49-426 (427)
173 3hbx_A GAD 1, glutamate decarb 100.0 1.9E-29 6.4E-34 244.8 32.5 348 28-389 53-447 (502)
174 3pj0_A LMO0305 protein; struct 100.0 4.1E-31 1.4E-35 246.4 20.0 330 28-382 11-358 (359)
175 1wyu_B Glycine dehydrogenase s 100.0 2E-30 6.9E-35 250.3 25.4 333 31-385 67-440 (474)
176 3uwc_A Nucleotide-sugar aminot 100.0 3E-30 1E-34 241.9 24.8 319 30-385 6-370 (374)
177 3e9k_A Kynureninase; kynurenin 100.0 6E-31 2.1E-35 253.8 19.7 338 30-386 66-461 (465)
178 3lws_A Aromatic amino acid bet 100.0 1E-30 3.5E-35 243.5 20.6 299 62-383 41-356 (357)
179 2cjg_A L-lysine-epsilon aminot 100.0 3.8E-31 1.3E-35 253.7 17.2 337 27-386 51-448 (449)
180 3dr4_A Putative perosamine syn 100.0 1.8E-29 6.3E-34 238.0 28.3 321 30-383 22-390 (391)
181 2cy8_A D-phgat, D-phenylglycin 100.0 1.4E-30 5E-35 250.3 20.4 331 28-391 55-440 (453)
182 3qhx_A Cystathionine gamma-syn 100.0 3.4E-29 1.2E-33 235.8 28.4 284 72-383 66-391 (392)
183 2epj_A Glutamate-1-semialdehyd 100.0 2.4E-30 8.1E-35 247.5 20.2 333 27-387 53-432 (434)
184 3ju7_A Putative PLP-dependent 100.0 4.3E-29 1.5E-33 233.7 26.9 326 36-386 6-375 (377)
185 1gc0_A Methionine gamma-lyase; 100.0 7.8E-29 2.7E-33 234.1 28.5 281 72-381 65-396 (398)
186 1qgn_A Protein (cystathionine 100.0 4.9E-29 1.7E-33 236.9 26.7 285 73-385 115-444 (445)
187 4e77_A Glutamate-1-semialdehyd 100.0 3.3E-29 1.1E-33 239.1 25.3 339 27-385 50-428 (429)
188 1cs1_A CGS, protein (cystathio 100.0 3.3E-28 1.1E-32 229.0 31.3 285 68-387 52-384 (386)
189 2a7v_A Serine hydroxymethyltra 100.0 7.3E-29 2.5E-33 237.5 27.0 363 10-386 34-441 (490)
190 2fyf_A PSAT, phosphoserine ami 100.0 4E-29 1.4E-33 236.2 24.8 325 31-385 40-397 (398)
191 1pff_A Methionine gamma-lyase; 100.0 8.8E-29 3E-33 228.0 25.5 276 72-381 2-329 (331)
192 3nyt_A Aminotransferase WBPE; 100.0 9.4E-29 3.2E-33 231.1 25.9 305 44-382 14-360 (367)
193 2cb1_A O-acetyl homoserine sul 100.0 1.9E-27 6.6E-32 225.6 35.1 304 41-380 31-410 (412)
194 3frk_A QDTB; aminotransferase, 100.0 5.8E-29 2E-33 233.1 24.3 307 45-385 16-367 (373)
195 3ke3_A Putative serine-pyruvat 100.0 2E-29 6.9E-34 236.6 21.0 324 44-387 9-377 (379)
196 2e7u_A Glutamate-1-semialdehyd 100.0 1.2E-29 4.1E-34 241.8 19.7 326 27-383 49-424 (424)
197 3acz_A Methionine gamma-lyase; 100.0 6.4E-28 2.2E-32 227.0 30.3 279 70-384 61-387 (389)
198 1js3_A DDC;, DOPA decarboxylas 100.0 1.2E-28 4.1E-33 238.9 23.8 333 46-391 88-479 (486)
199 1n8p_A Cystathionine gamma-lya 100.0 1.8E-28 6.1E-33 230.9 23.8 282 69-381 56-390 (393)
200 2qma_A Diaminobutyrate-pyruvat 100.0 2.6E-28 8.8E-33 237.1 25.5 332 43-386 111-496 (497)
201 2okj_A Glutamate decarboxylase 100.0 1.2E-27 4.2E-32 232.7 30.3 331 45-386 105-502 (504)
202 3vp6_A Glutamate decarboxylase 100.0 1.3E-27 4.4E-32 232.3 29.4 330 45-386 108-505 (511)
203 3cog_A Cystathionine gamma-lya 100.0 6.4E-28 2.2E-32 227.8 26.3 285 67-388 66-400 (403)
204 2z67_A O-phosphoseryl-tRNA(SEC 100.0 2.3E-28 8E-33 234.7 23.0 298 70-383 131-455 (456)
205 2oqx_A Tryptophanase; lyase, p 100.0 1.3E-28 4.3E-33 237.8 20.5 327 46-387 53-443 (467)
206 4e1o_A HDC, histidine decarbox 100.0 1.3E-27 4.4E-32 230.9 27.3 331 45-388 91-480 (481)
207 1o69_A Aminotransferase; struc 100.0 6.7E-27 2.3E-31 220.6 31.5 310 45-384 11-385 (394)
208 3k40_A Aromatic-L-amino-acid d 100.0 9.9E-28 3.4E-32 231.1 25.7 334 44-389 85-474 (475)
209 3bb8_A CDP-4-keto-6-deoxy-D-gl 100.0 6.8E-27 2.3E-31 223.6 30.7 324 29-384 30-434 (437)
210 3ri6_A O-acetylhomoserine sulf 100.0 9.6E-28 3.3E-32 227.4 24.1 285 72-383 82-429 (430)
211 2fq6_A Cystathionine beta-lyas 100.0 2.9E-27 9.9E-32 223.4 26.1 282 73-380 83-412 (415)
212 3nmy_A Xometc, cystathionine g 100.0 6.2E-27 2.1E-31 220.3 27.1 286 70-384 65-397 (400)
213 1ohv_A 4-aminobutyrate aminotr 100.0 8.1E-28 2.8E-32 231.7 20.3 339 27-385 60-470 (472)
214 3b8x_A WBDK, pyridoxamine 5-ph 100.0 1E-25 3.5E-30 212.3 31.9 307 44-379 13-389 (390)
215 2jis_A Cysteine sulfinic acid 100.0 4.7E-26 1.6E-30 222.0 29.1 331 44-385 120-514 (515)
216 2yky_A Beta-transaminase; tran 99.9 9.4E-30 3.2E-34 242.3 0.0 331 27-387 97-461 (465)
217 1wyu_A Glycine dehydrogenase ( 99.9 8.8E-26 3E-30 215.9 24.3 320 34-383 68-437 (438)
218 2x3l_A ORN/Lys/Arg decarboxyla 99.9 1.6E-26 5.4E-31 221.0 18.8 287 73-387 58-354 (446)
219 2ctz_A O-acetyl-L-homoserine s 99.9 2.5E-25 8.5E-30 211.4 22.0 284 71-383 61-420 (421)
220 3hvy_A Cystathionine beta-lyas 99.9 3.9E-25 1.3E-29 208.5 18.4 272 46-341 47-353 (427)
221 3e77_A Phosphoserine aminotran 99.9 1.9E-24 6.4E-29 200.1 22.2 324 40-385 20-374 (377)
222 3jzl_A Putative cystathionine 99.9 2.4E-24 8.4E-29 202.4 22.8 271 46-341 32-336 (409)
223 3i16_A Aluminum resistance pro 99.9 2.4E-24 8.2E-29 203.1 21.7 274 46-341 46-353 (427)
224 1c4k_A Protein (ornithine deca 99.9 5E-23 1.7E-27 205.6 31.6 302 70-388 175-568 (730)
225 3ht4_A Aluminum resistance pro 99.9 7.6E-25 2.6E-29 207.6 17.3 277 45-341 37-342 (431)
226 4ao9_A Beta-phenylalanine amin 99.9 2.6E-23 8.8E-28 196.6 25.6 330 27-389 84-449 (454)
227 3qm2_A Phosphoserine aminotran 99.9 1.9E-24 6.5E-29 201.3 17.4 316 43-385 37-384 (386)
228 3m5u_A Phosphoserine aminotran 99.9 5.1E-23 1.7E-27 189.9 24.3 324 30-385 4-359 (361)
229 2vyc_A Biodegradative arginine 99.9 2.7E-23 9.3E-28 209.4 24.2 299 76-387 209-606 (755)
230 4atq_A 4-aminobutyrate transam 99.9 6E-23 2.1E-27 195.0 22.6 347 27-386 61-455 (456)
231 4e3q_A Pyruvate transaminase; 99.9 1.5E-21 5.2E-26 186.0 26.7 346 27-388 64-470 (473)
232 3ou5_A Serine hydroxymethyltra 99.9 5.6E-21 1.9E-25 175.3 23.6 359 12-384 36-439 (490)
233 3n75_A LDC, lysine decarboxyla 99.9 1.1E-19 3.9E-24 180.0 29.6 298 70-388 197-562 (715)
234 4a0g_A Adenosylmethionine-8-am 99.8 5.7E-21 2E-25 193.8 12.1 339 31-386 381-828 (831)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 4.3E-18 1.5E-22 157.1 24.7 309 72-389 116-464 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 2.3E-17 7.7E-22 154.4 23.4 310 70-388 96-445 (450)
237 2yvq_A Carbamoyl-phosphate syn 80.2 16 0.00055 27.8 9.6 109 86-203 21-131 (143)
238 3vnd_A TSA, tryptophan synthas 61.7 75 0.0026 27.1 12.9 159 26-202 42-211 (267)
239 1xky_A Dihydrodipicolinate syn 56.7 13 0.00044 32.6 4.9 74 127-202 8-86 (301)
240 1y80_A Predicted cobalamin bin 56.4 54 0.0019 26.6 8.5 58 128-197 110-167 (210)
241 2wkj_A N-acetylneuraminate lya 54.7 28 0.00097 30.4 6.8 71 130-202 10-85 (303)
242 3gh5_A HEX1, beta-hexosaminida 48.7 82 0.0028 29.9 9.2 110 87-202 128-274 (525)
243 3rd5_A Mypaa.01249.C; ssgcid, 47.9 61 0.0021 27.7 7.9 76 89-169 16-91 (291)
244 1ofu_X SULA, hypothetical prot 47.1 81 0.0028 23.0 10.7 80 112-201 32-114 (119)
245 4f6o_A Metacaspase-1; rossmann 46.9 73 0.0025 28.4 8.1 58 68-125 71-140 (350)
246 4fgs_A Probable dehydrogenase 46.1 1E+02 0.0034 26.3 8.8 98 90-192 29-133 (273)
247 3l21_A DHDPS, dihydrodipicolin 45.2 60 0.002 28.3 7.3 69 132-202 16-89 (304)
248 4dqx_A Probable oxidoreductase 44.9 1.4E+02 0.0047 25.3 9.6 97 89-191 27-130 (277)
249 3rjz_A N-type ATP pyrophosphat 44.3 1.4E+02 0.0047 24.9 10.1 100 91-201 7-120 (237)
250 4dpp_A DHDPS 2, dihydrodipicol 44.2 73 0.0025 28.5 7.8 73 128-202 56-133 (360)
251 4g81_D Putative hexonate dehyd 43.9 1.4E+02 0.0049 25.0 10.5 100 86-191 6-115 (255)
252 3s5o_A 4-hydroxy-2-oxoglutarat 43.7 50 0.0017 28.8 6.6 59 142-202 25-88 (307)
253 3rwb_A TPLDH, pyridoxal 4-dehy 42.4 1.4E+02 0.0049 24.5 9.7 96 90-191 7-109 (247)
254 3flu_A DHDPS, dihydrodipicolin 41.9 44 0.0015 29.0 5.9 59 142-202 18-81 (297)
255 3cpr_A Dihydrodipicolinate syn 40.6 76 0.0026 27.6 7.3 68 133-202 18-90 (304)
256 2yxb_A Coenzyme B12-dependent 40.6 88 0.003 24.2 6.9 58 128-197 40-97 (161)
257 3f9i_A 3-oxoacyl-[acyl-carrier 40.2 1E+02 0.0035 25.4 7.9 77 90-171 14-91 (249)
258 3mwd_B ATP-citrate synthase; A 40.0 88 0.003 27.7 7.5 78 119-207 63-141 (334)
259 4h1h_A LMO1638 protein; MCCF-l 39.9 56 0.0019 28.8 6.4 72 110-183 9-97 (327)
260 3h5d_A DHDPS, dihydrodipicolin 39.5 54 0.0018 28.7 6.1 70 131-202 7-81 (311)
261 2gjh_A Designed protein; oblig 39.1 60 0.002 19.2 4.2 29 359-387 3-31 (62)
262 1oft_A SULA, hypothetical prot 38.8 1.4E+02 0.0046 23.2 12.0 79 112-200 74-155 (161)
263 2nu8_A Succinyl-COA ligase [AD 38.8 72 0.0025 27.5 6.8 75 121-207 51-125 (288)
264 1tks_A 3,4-dihydroxy-2-butanon 38.1 39 0.0013 27.4 4.5 35 165-202 160-194 (204)
265 3dz1_A Dihydrodipicolinate syn 38.0 46 0.0016 29.2 5.4 59 142-202 19-81 (313)
266 3tpc_A Short chain alcohol deh 37.4 1.7E+02 0.006 24.1 9.4 65 90-160 8-73 (257)
267 3tla_A MCCF; serine protease, 36.4 98 0.0033 27.8 7.4 72 110-183 40-128 (371)
268 3mfq_A TROA, high-affinity zin 36.3 50 0.0017 28.4 5.3 79 114-202 163-243 (282)
269 2yv2_A Succinyl-COA synthetase 35.8 96 0.0033 26.8 7.1 78 119-208 55-133 (297)
270 4eso_A Putative oxidoreductase 35.4 1.7E+02 0.0059 24.2 8.6 97 90-191 9-111 (255)
271 4gqr_A Pancreatic alpha-amylas 35.4 31 0.001 32.2 4.1 32 180-211 73-104 (496)
272 3tak_A DHDPS, dihydrodipicolin 35.3 51 0.0017 28.5 5.2 59 142-202 12-75 (291)
273 3kux_A Putative oxidoreductase 35.0 1.1E+02 0.0037 27.1 7.5 69 123-203 56-124 (352)
274 2r8w_A AGR_C_1641P; APC7498, d 34.4 61 0.0021 28.7 5.7 59 142-202 45-108 (332)
275 3fkr_A L-2-keto-3-deoxyarabona 34.3 40 0.0014 29.5 4.4 59 142-202 19-82 (309)
276 3ppi_A 3-hydroxyacyl-COA dehyd 34.3 2.1E+02 0.007 24.0 9.1 65 90-160 31-96 (281)
277 3si9_A DHDPS, dihydrodipicolin 34.3 49 0.0017 29.1 5.0 59 142-202 33-96 (315)
278 3ruf_A WBGU; rossmann fold, UD 34.3 2.3E+02 0.0078 24.5 10.5 101 88-198 24-143 (351)
279 1f6k_A N-acetylneuraminate lya 34.2 57 0.0019 28.2 5.4 59 142-202 14-78 (293)
280 4e5s_A MCCFLIKE protein (BA_56 34.2 93 0.0032 27.5 6.8 71 110-182 9-96 (331)
281 2ojp_A DHDPS, dihydrodipicolin 33.7 56 0.0019 28.3 5.2 59 142-202 12-75 (292)
282 3f7j_A YVGN protein; aldo-keto 33.6 2.2E+02 0.0075 24.1 10.5 137 44-202 29-188 (276)
283 4e6p_A Probable sorbitol dehyd 33.6 2E+02 0.007 23.7 9.7 97 90-191 9-111 (259)
284 2yv1_A Succinyl-COA ligase [AD 33.1 66 0.0023 27.8 5.6 77 120-208 56-132 (294)
285 4hp8_A 2-deoxy-D-gluconate 3-d 33.1 2.1E+02 0.0073 23.8 8.8 96 90-192 9-109 (247)
286 3gem_A Short chain dehydrogena 33.0 2.1E+02 0.0072 23.8 9.7 75 89-171 27-106 (260)
287 3gvc_A Oxidoreductase, probabl 33.0 1.7E+02 0.0058 24.7 8.3 96 91-191 30-132 (277)
288 3pxx_A Carveol dehydrogenase; 32.9 1.7E+02 0.0059 24.5 8.4 97 90-191 11-126 (287)
289 3b3e_A YVGN protein; aldo-keto 32.8 2.4E+02 0.0083 24.4 10.7 136 45-202 64-222 (310)
290 1now_A Beta-hexosaminidase bet 32.8 1.7E+02 0.0059 27.5 8.8 105 87-202 104-238 (507)
291 2kfp_A Pspto_3016 protein; alp 32.8 1.5E+02 0.005 21.8 6.9 37 339-377 73-110 (125)
292 1qyd_A Pinoresinol-lariciresin 32.4 2.3E+02 0.0078 24.0 9.2 99 91-202 6-113 (313)
293 3op4_A 3-oxoacyl-[acyl-carrier 32.4 1.9E+02 0.0064 23.8 8.3 96 90-191 10-112 (248)
294 2v9d_A YAGE; dihydrodipicolini 32.1 62 0.0021 28.8 5.3 59 142-202 42-105 (343)
295 3bzy_B ESCU; auto cleavage pro 31.9 29 0.00098 23.6 2.4 22 186-207 29-50 (83)
296 3a5f_A Dihydrodipicolinate syn 31.6 55 0.0019 28.3 4.8 58 142-202 13-75 (291)
297 2pcq_A Putative dihydrodipicol 31.1 21 0.0007 30.9 2.0 57 142-202 9-67 (283)
298 3uf0_A Short-chain dehydrogena 30.8 2.4E+02 0.0081 23.6 8.9 100 86-191 28-135 (273)
299 3qze_A DHDPS, dihydrodipicolin 30.7 47 0.0016 29.1 4.3 59 142-202 34-97 (314)
300 3n0v_A Formyltetrahydrofolate 30.6 2.6E+02 0.0088 24.0 9.0 109 69-186 63-184 (286)
301 3db2_A Putative NADPH-dependen 30.6 1.6E+02 0.0055 25.9 8.0 24 182-205 102-125 (354)
302 3na8_A Putative dihydrodipicol 30.5 44 0.0015 29.3 4.0 59 142-202 35-98 (315)
303 3grp_A 3-oxoacyl-(acyl carrier 30.3 2.2E+02 0.0074 23.8 8.4 64 92-160 29-93 (266)
304 3ohs_X Trans-1,2-dihydrobenzen 30.2 1.1E+02 0.0039 26.6 6.8 71 123-205 55-125 (334)
305 3kwp_A Predicted methyltransfe 30.1 2.6E+02 0.009 24.0 8.9 17 92-108 120-136 (296)
306 3lou_A Formyltetrahydrofolate 29.8 2.5E+02 0.0085 24.2 8.6 109 69-186 68-189 (292)
307 3o1l_A Formyltetrahydrofolate 29.7 2.8E+02 0.0094 24.0 9.4 109 69-186 78-199 (302)
308 3m1a_A Putative dehydrogenase; 29.5 2.5E+02 0.0085 23.4 8.9 95 92-191 7-108 (281)
309 3auf_A Glycinamide ribonucleot 29.4 1.8E+02 0.0061 24.0 7.4 86 92-186 26-119 (229)
310 3b4u_A Dihydrodipicolinate syn 29.3 75 0.0026 27.5 5.3 53 142-196 14-68 (294)
311 3i6i_A Putative leucoanthocyan 29.2 2.4E+02 0.0082 24.4 8.9 97 90-202 11-116 (346)
312 3av3_A Phosphoribosylglycinami 29.1 1.5E+02 0.0053 24.0 6.9 85 93-186 8-100 (212)
313 3sr3_A Microcin immunity prote 29.0 1.4E+02 0.0048 26.4 7.1 72 110-183 10-98 (336)
314 2pju_A Propionate catabolism o 29.0 2.4E+02 0.0082 23.1 11.9 66 70-140 21-88 (225)
315 3m2t_A Probable dehydrogenase; 28.7 2.6E+02 0.0089 24.6 9.0 74 122-207 56-129 (359)
316 1oi7_A Succinyl-COA synthetase 28.6 1.1E+02 0.0037 26.4 6.2 78 120-209 50-127 (288)
317 3gdo_A Uncharacterized oxidore 28.6 1.3E+02 0.0043 26.7 6.9 71 123-205 54-124 (358)
318 3v5n_A Oxidoreductase; structu 28.6 2.2E+02 0.0075 25.8 8.6 74 122-207 93-171 (417)
319 3io5_A Recombination and repai 28.3 3.1E+02 0.011 24.1 11.0 97 98-202 42-167 (333)
320 3n74_A 3-ketoacyl-(acyl-carrie 28.3 2.5E+02 0.0085 23.1 9.2 97 90-191 10-113 (261)
321 2dt5_A AT-rich DNA-binding pro 28.2 1.7E+02 0.0058 23.8 7.0 45 152-207 130-174 (211)
322 3oqb_A Oxidoreductase; structu 28.2 2.1E+02 0.0072 25.4 8.4 21 182-202 119-139 (383)
323 4exb_A Putative uncharacterize 28.2 2.8E+02 0.0096 23.7 10.3 137 45-203 69-235 (292)
324 3e96_A Dihydrodipicolinate syn 28.1 72 0.0025 27.9 5.0 68 133-202 13-86 (316)
325 2hmc_A AGR_L_411P, dihydrodipi 28.1 62 0.0021 28.8 4.6 59 142-202 37-97 (344)
326 1jr2_A Uroporphyrinogen-III sy 28.1 79 0.0027 27.0 5.3 85 86-173 132-219 (286)
327 3e18_A Oxidoreductase; dehydro 28.0 1.4E+02 0.0047 26.5 7.0 23 368-390 324-346 (359)
328 1jak_A Beta-N-acetylhexosamini 27.6 1.1E+02 0.0038 28.9 6.4 66 131-202 184-249 (512)
329 1g94_A Alpha-amylase; beta-alp 27.4 47 0.0016 30.7 3.9 30 182-211 63-92 (448)
330 1w3i_A EDA, 2-keto-3-deoxy glu 27.2 78 0.0027 27.3 5.0 53 142-196 10-64 (293)
331 3bk2_A RNAse J, metal dependen 27.1 1.1E+02 0.0037 29.3 6.4 78 111-198 337-423 (562)
332 3moi_A Probable dehydrogenase; 27.1 1.3E+02 0.0044 27.0 6.8 24 367-390 360-383 (387)
333 4fb5_A Probable oxidoreductase 27.0 1.3E+02 0.0043 26.8 6.7 21 368-388 366-386 (393)
334 1pjq_A CYSG, siroheme synthase 27.0 3.1E+02 0.01 25.3 9.4 97 86-206 9-107 (457)
335 3nav_A Tryptophan synthase alp 27.0 2.9E+02 0.0099 23.4 13.1 159 27-202 45-213 (271)
336 2ehh_A DHDPS, dihydrodipicolin 26.9 95 0.0033 26.8 5.5 58 142-202 12-74 (294)
337 4gqa_A NAD binding oxidoreduct 26.7 1.1E+02 0.0039 27.6 6.4 22 182-203 132-153 (412)
338 1lwj_A 4-alpha-glucanotransfer 26.3 55 0.0019 30.1 4.1 29 182-210 68-96 (441)
339 3qfe_A Putative dihydrodipicol 26.2 63 0.0022 28.3 4.3 59 142-202 21-85 (318)
340 1mxg_A Alpha amylase; hyperthe 25.9 56 0.0019 30.1 4.1 29 182-210 85-113 (435)
341 3m5v_A DHDPS, dihydrodipicolin 25.9 67 0.0023 27.9 4.4 58 142-202 19-82 (301)
342 1ht6_A AMY1, alpha-amylase iso 25.9 55 0.0019 29.8 4.0 30 181-210 66-95 (405)
343 3t7y_A YOP proteins translocat 25.9 39 0.0013 23.8 2.2 21 186-206 44-64 (97)
344 3ecs_A Translation initiation 25.8 3.3E+02 0.011 23.7 10.0 104 87-203 119-229 (315)
345 3dqp_A Oxidoreductase YLBE; al 25.8 2.5E+02 0.0085 22.3 10.1 93 92-197 3-97 (219)
346 4ew6_A D-galactose-1-dehydroge 25.6 90 0.0031 27.4 5.2 74 122-207 68-142 (330)
347 3l6e_A Oxidoreductase, short-c 25.6 2.7E+02 0.0092 22.6 8.5 94 92-191 6-106 (235)
348 3o63_A Probable thiamine-phosp 25.6 99 0.0034 25.9 5.2 51 152-205 46-104 (243)
349 2nuw_A 2-keto-3-deoxygluconate 25.5 71 0.0024 27.5 4.4 53 142-196 10-64 (288)
350 1zh8_A Oxidoreductase; TM0312, 25.5 1.4E+02 0.0046 26.3 6.4 72 123-206 71-142 (340)
351 2vt1_B Surface presentation of 25.4 43 0.0015 23.3 2.4 22 186-207 29-50 (93)
352 1gcy_A Glucan 1,4-alpha-maltot 25.2 62 0.0021 30.7 4.3 31 182-212 91-121 (527)
353 2p2s_A Putative oxidoreductase 25.2 1.5E+02 0.0053 25.7 6.8 71 123-205 55-125 (336)
354 3cpq_A 50S ribosomal protein L 25.1 1.6E+02 0.0054 21.0 5.6 43 152-202 26-68 (110)
355 3f4l_A Putative oxidoreductase 25.1 1.2E+02 0.0042 26.6 6.1 71 124-206 55-125 (345)
356 1ny1_A Probable polysaccharide 25.0 2.3E+02 0.008 23.3 7.5 71 126-201 150-224 (240)
357 1ud2_A Amylase, alpha-amylase; 25.0 51 0.0017 30.8 3.6 29 182-210 79-107 (480)
358 4had_A Probable oxidoreductase 24.8 85 0.0029 27.6 5.0 9 114-122 88-96 (350)
359 3guy_A Short-chain dehydrogena 24.8 2.7E+02 0.0093 22.3 8.8 95 92-191 4-101 (230)
360 3bh4_A Alpha-amylase; calcium, 24.8 51 0.0018 30.8 3.6 30 181-210 76-105 (483)
361 1hvx_A Alpha-amylase; hydrolas 24.5 52 0.0018 31.1 3.6 30 181-210 79-108 (515)
362 3e82_A Putative oxidoreductase 24.5 3.6E+02 0.012 23.7 9.2 71 123-205 56-126 (364)
363 2gjx_A Beta-hexosaminidase alp 24.5 87 0.003 29.6 5.1 106 87-202 98-233 (507)
364 3pff_A ATP-citrate synthase; p 24.5 1.8E+02 0.006 29.4 7.4 77 119-207 549-627 (829)
365 3evn_A Oxidoreductase, GFO/IDH 24.4 1.5E+02 0.005 25.9 6.4 68 124-203 57-124 (329)
366 3c01_E Surface presentation of 24.4 43 0.0015 23.6 2.2 22 186-207 29-50 (98)
367 3re1_A Uroporphyrinogen-III sy 24.4 35 0.0012 29.1 2.2 62 112-174 13-76 (269)
368 4f40_A Prostaglandin F2-alpha 24.4 3.3E+02 0.011 23.1 11.6 136 45-202 34-200 (288)
369 2o1e_A YCDH; alpha-beta protei 24.3 3.5E+02 0.012 23.4 8.8 76 112-201 189-266 (312)
370 3kts_A Glycerol uptake operon 24.1 1.3E+02 0.0046 24.1 5.4 42 151-202 18-59 (192)
371 2ywr_A Phosphoribosylglycinami 24.0 1.8E+02 0.0061 23.7 6.4 85 93-186 6-98 (216)
372 3i23_A Oxidoreductase, GFO/IDH 24.0 1.4E+02 0.0047 26.3 6.2 21 182-202 101-121 (349)
373 1wpc_A Glucan 1,4-alpha-maltoh 23.8 55 0.0019 30.6 3.6 29 181-209 80-108 (485)
374 2yxg_A DHDPS, dihydrodipicolin 23.8 91 0.0031 26.8 4.8 58 142-202 12-74 (289)
375 1lc0_A Biliverdin reductase A; 23.8 2.3E+02 0.0077 24.2 7.4 72 123-206 54-125 (294)
376 3d0c_A Dihydrodipicolinate syn 23.7 69 0.0023 28.1 4.0 59 142-202 22-86 (314)
377 4es6_A Uroporphyrinogen-III sy 23.5 33 0.0011 28.8 1.9 61 113-174 6-68 (254)
378 3fhl_A Putative oxidoreductase 23.4 1.3E+02 0.0043 26.8 5.9 71 123-205 54-124 (362)
379 2fp4_A Succinyl-COA ligase [GD 23.4 99 0.0034 26.9 4.9 78 120-209 57-135 (305)
380 2guy_A Alpha-amylase A; (beta- 23.3 61 0.0021 30.2 3.9 30 182-211 96-125 (478)
381 1wza_A Alpha-amylase A; hydrol 23.0 73 0.0025 29.8 4.3 28 182-209 80-107 (488)
382 4gmf_A Yersiniabactin biosynth 22.9 96 0.0033 27.9 4.9 10 113-122 67-76 (372)
383 2z1k_A (NEO)pullulanase; hydro 22.7 69 0.0024 29.8 4.1 29 182-210 95-123 (475)
384 3u3x_A Oxidoreductase; structu 22.4 1.1E+02 0.0036 27.3 5.1 73 122-206 76-148 (361)
385 2aaa_A Alpha-amylase; glycosid 22.2 69 0.0024 29.9 4.0 30 182-211 96-125 (484)
386 3sx2_A Putative 3-ketoacyl-(ac 22.1 3.4E+02 0.012 22.5 8.3 30 90-120 14-44 (278)
387 3dhu_A Alpha-amylase; structur 22.1 71 0.0024 29.4 4.0 30 181-210 81-110 (449)
388 3v2g_A 3-oxoacyl-[acyl-carrier 22.0 3.5E+02 0.012 22.6 8.8 101 86-191 28-138 (271)
389 4aie_A Glucan 1,6-alpha-glucos 22.0 62 0.0021 30.7 3.6 28 182-209 78-105 (549)
390 1ua7_A Alpha-amylase; beta-alp 21.9 68 0.0023 29.3 3.8 30 182-211 73-102 (422)
391 3e48_A Putative nucleoside-dip 21.8 3.5E+02 0.012 22.5 8.3 93 92-198 3-98 (289)
392 1ccw_A Protein (glutamate muta 21.8 1.4E+02 0.0048 22.2 5.0 57 128-196 25-81 (137)
393 1meo_A Phosophoribosylglycinam 21.8 2.3E+02 0.0078 23.0 6.5 85 93-186 5-97 (209)
394 2o23_A HADH2 protein; HSD17B10 21.8 3.3E+02 0.011 22.2 10.5 67 89-160 12-78 (265)
395 3ln3_A Dihydrodiol dehydrogena 21.7 3.9E+02 0.013 23.0 10.8 46 150-202 169-216 (324)
396 3o9z_A Lipopolysaccaride biosy 21.6 1.6E+02 0.0054 25.5 6.0 21 182-202 108-128 (312)
397 1qys_A TOP7; alpha-beta, novel 21.5 1.8E+02 0.0061 19.1 4.7 32 356-387 44-75 (106)
398 1j0h_A Neopullulanase; beta-al 21.3 77 0.0026 30.5 4.2 29 182-210 221-249 (588)
399 1ea9_C Cyclomaltodextrinase; h 21.3 86 0.0029 30.2 4.5 30 181-210 216-245 (583)
400 4hkt_A Inositol 2-dehydrogenas 21.3 2E+02 0.0069 24.9 6.7 73 123-207 52-124 (331)
401 3nl6_A Thiamine biosynthetic b 21.1 1.2E+02 0.0041 28.9 5.4 49 152-204 28-76 (540)
402 3e9m_A Oxidoreductase, GFO/IDH 21.0 1.8E+02 0.0062 25.3 6.3 24 182-205 103-126 (330)
403 2yl5_A Beta-N-acetylhexosamini 20.9 77 0.0026 29.3 3.9 28 175-202 86-113 (442)
404 3zq4_A Ribonuclease J 1, RNAse 20.9 1.8E+02 0.0061 27.8 6.6 78 111-198 322-408 (555)
405 3gi1_A LBP, laminin-binding pr 20.8 2.7E+02 0.0093 23.7 7.2 76 112-202 178-256 (286)
406 3uve_A Carveol dehydrogenase ( 20.8 3.7E+02 0.013 22.4 8.4 30 90-120 12-42 (286)
407 2qbu_A Precorrin-2 methyltrans 20.8 2.6E+02 0.0088 22.7 6.9 13 91-103 124-136 (232)
408 1jae_A Alpha-amylase; glycosid 20.7 74 0.0025 29.6 3.8 30 182-211 73-102 (471)
409 1wzl_A Alpha-amylase II; pullu 20.6 76 0.0026 30.6 4.0 29 182-210 218-246 (585)
410 4dmm_A 3-oxoacyl-[acyl-carrier 20.5 3.6E+02 0.012 22.4 8.0 96 91-191 29-135 (269)
411 2e0n_A Precorrin-2 C20-methylt 20.5 2.7E+02 0.0092 23.2 7.1 21 22-42 89-109 (259)
412 3q2i_A Dehydrogenase; rossmann 20.4 1.8E+02 0.0063 25.5 6.3 22 182-203 111-132 (354)
413 3e2i_A Thymidine kinase; Zn-bi 20.4 2E+02 0.0068 23.6 5.8 96 98-209 42-140 (219)
414 1vhx_A Putative holliday junct 20.4 2.5E+02 0.0085 21.3 6.2 58 149-207 41-101 (150)
415 1xp8_A RECA protein, recombina 20.3 3.6E+02 0.012 24.0 8.1 29 335-365 289-317 (366)
416 2dh2_A 4F2 cell-surface antige 20.2 83 0.0028 28.8 4.0 29 182-210 80-108 (424)
417 3rc1_A Sugar 3-ketoreductase; 20.1 1.5E+02 0.0052 26.1 5.7 71 125-207 80-150 (350)
418 3dm5_A SRP54, signal recogniti 20.1 5.1E+02 0.017 23.8 10.2 29 358-386 397-426 (443)
No 1
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=3.8e-50 Score=378.90 Aligned_cols=368 Identities=26% Similarity=0.464 Sum_probs=312.1
Q ss_pred HHHHhhhcCchHHHHHHH----HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768 7 LAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+++|+.....+.+..+.. ..+.++++|+|+.+++++++++.+.+++.+.+... ...|++..|..++++++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~ 82 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALAEKFR 82 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHH
Confidence 567777655554444333 33456889999999999888899999998888664 4568777889999999999999
Q ss_pred hhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768 83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL 159 (400)
Q Consensus 83 ~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l 159 (400)
+.+|+ ++++|++|+|++++++.++.++.++||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++.+++.+
T Consensus 83 ~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l 161 (385)
T 1b5p_A 83 RENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEV-ETLPEEGFVPDPERVRRAI 161 (385)
T ss_dssp HTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHTTC
T ss_pred HHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ecCcccCCCCCHHHHHHhc
Confidence 88774 57899999999999999999999999999999999999999999999999999 8875 57788999999998
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cccCCCcEEEEeccccccCCC
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~ 237 (400)
++++ ++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++... .....+++++++|+||.+|++
T Consensus 162 ~~~~--~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~ 239 (385)
T 1b5p_A 162 TPRT--KALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239 (385)
T ss_dssp CTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCG
T ss_pred CCCC--EEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCc
Confidence 7654 999999999999999999999999999999999999999999988754211 111127799999999999999
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC---CcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT---GPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
|+|+||++.+ +++++.+.......+++++.+.+.++..+|+. +.+++++.++.++++++.+.+.|+++ ++.+.
T Consensus 240 G~RiG~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 315 (385)
T 1b5p_A 240 GWRIGYACGP---KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAV 315 (385)
T ss_dssp GGCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC
T ss_pred ccceEEEEeC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeec
Confidence 9999999998 78888888776666678899999999999975 45678888899999999999999988 45777
Q ss_pred CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
.+.+++++|+.++....+..++..+|. ++||.+.||..|+.++++|||++ .+++++++++++|+++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~-~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 316 RPSGAFYVLMDTSPIAPDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYA-TSEENLRKALERFARVLG 383 (385)
T ss_dssp CCSBTTEEEEECTTTCSSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHHGGGGC-
T ss_pred CCCeeEEEEEecCCCCCCHHHHHHHHH-HCCeEEecccccCCCCeEEEEec-CCHHHHHHHHHHHHHHHh
Confidence 788889999998642346788998887 89999999999877889999999 589999999999987764
No 2
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.1e-48 Score=369.58 Aligned_cols=373 Identities=26% Similarity=0.435 Sum_probs=321.0
Q ss_pred hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
|++|+|+.....+.+.++.+..+..+++++|+.+.+++++++.+++++.+.+.+. ...|++..+..++++++++++.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~ 79 (389)
T 1gd9_A 1 MALSDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIAEKLKKQ 79 (389)
T ss_dssp -CHHHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CchhhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHHHHHHHHHHH
Confidence 5688999888888888888877766789999999998888999999999988764 356877778999999999999988
Q ss_pred cC--CCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhc
Q 015768 85 NK--LYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLE 160 (400)
Q Consensus 85 ~~--~~~~~-i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~ 160 (400)
+| +++++ +++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++ +++.+|++.+++.++
T Consensus 80 ~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~ 158 (389)
T 1gd9_A 80 NGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEV-PTYEEDEFRLNVDELKKYVT 158 (389)
T ss_dssp HCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEE-ECCGGGTTCCCHHHHHHHCC
T ss_pred hCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEe-ccCCccCCCCCHHHHHHhcC
Confidence 77 46788 9999999999999999999999999999999999999999999999999 8775 367789999999997
Q ss_pred cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC---ccccC--CCcEEEEeccccccC
Q 015768 161 TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVE--GDHVVNLFSFSKAYG 235 (400)
Q Consensus 161 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~--~~~~i~~~s~sK~~g 235 (400)
++ +++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.+ ..... .+++++++|+||.+|
T Consensus 159 ~~--~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 236 (389)
T 1gd9_A 159 DK--TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA 236 (389)
T ss_dssp TT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT
T ss_pred cC--ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC
Confidence 64 489999999999999999999999999999999999999999998876531 11111 467899999999998
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAV 313 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 313 (400)
++|+|+||++++ +++++.+.......+++.+.+.+.++..+|+...+ +++++.++++++++.+.+.|++++ +.+
T Consensus 237 ~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~ 312 (389)
T 1gd9_A 237 MTGWRLGFVAAP---SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMG-LPT 312 (389)
T ss_dssp CGGGCCEEEECC---HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCC
T ss_pred CcccceEEEEEC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHcC-Cee
Confidence 899999999998 78889888877766788899999999999986444 678888999999999999999884 466
Q ss_pred cCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 314 KGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
..+.+++++|++++....+..++..+|++++||.+.||..|+ .++++||+++. +++++++++++|.+++++.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~~~~~ 386 (389)
T 1gd9_A 313 VKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYAT-AYEKLEEAMDRMERVLKER 386 (389)
T ss_dssp CCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCS-CHHHHHHHHHHHHHHHHHT
T ss_pred cCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 677778899999874223678888888668999999998886 36899999997 9999999999999998763
No 3
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=1e-48 Score=369.61 Aligned_cols=374 Identities=24% Similarity=0.435 Sum_probs=316.3
Q ss_pred hhHHHHhhhcCc----hHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEM----PIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
|++++|+.+... .......+..++++++++|+.+.++++.|+.+.+++.+.+.+. ...|++..+..+++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~ 79 (388)
T 1j32_A 1 MKLAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQK 79 (388)
T ss_dssp CCCCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred CchhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence 345666664332 3334444445668899999999998888899999999888664 45687778899999999999
Q ss_pred HHhhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768 81 LNQENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK 157 (400)
Q Consensus 81 l~~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~ 157 (400)
+.+.+|+ +++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++ +++.+|++.+++
T Consensus 80 ~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~ 158 (388)
T 1j32_A 80 LQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVIL-PTTVETQFKVSPEQIRQ 158 (388)
T ss_dssp HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCGGGTTCCCHHHHHH
T ss_pred HHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEe-cCCcccCCCCCHHHHHH
Confidence 9988774 57899999999999999999999999999999999999999999999999999 8775 356789999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC---CCcEEEEeccc
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE---GDHVVNLFSFS 231 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~---~~~~i~~~s~s 231 (400)
.+++++ ++|++++|+||||.++|.+++++|+++|++||+++|+|++|+.+.+++.+.. ... .+.++++.|+|
T Consensus 159 ~l~~~~--~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 236 (388)
T 1j32_A 159 AITPKT--KLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA 236 (388)
T ss_dssp HCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred hcCcCc--eEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeech
Confidence 997654 9999999999999999999999999999999999999999999887653321 111 35789999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|.+|++|+|+||++.+ +++++.+.......+++++.+.+.++..+|+...++++++.+++.++++++.+.|++++++
T Consensus 237 K~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~ 313 (388)
T 1j32_A 237 KTYAMTGWRVGFLAGP---VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGL 313 (388)
T ss_dssp TTTTCTTTCCEEEECC---HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred hccCCcccceEEEEeC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 9998899999999998 7888888877766678889999999989998666788889999999999999999998666
Q ss_pred cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+..+.+++++|+.++....+..++..+|++++||.+.+|..|+.++++|++++. +++++++++++|+++++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 314 ECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYAT-DLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp BCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 7777777888998886422367888888875689999999988778999999985 9999999999999998764
No 4
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=1.4e-48 Score=369.00 Aligned_cols=361 Identities=23% Similarity=0.336 Sum_probs=303.2
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCC
Q 015768 20 VQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAG 97 (400)
Q Consensus 20 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g 97 (400)
....++-++++++|+|+.|.++++.|+++++++.+.+.+. ...|++..|..++++++++++.+.+| +++++|++|+|
T Consensus 21 ~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g 99 (391)
T 3h14_A 21 EAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETD-ALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPG 99 (391)
T ss_dssp HHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESS
T ss_pred HHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecC
Confidence 3334445678999999999999998999999999988764 45787778899999999999998887 56899999999
Q ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 98 ANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 98 ~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
++++++.++.++.++||+|+++.|+|+++...++..|++++.+ |.+++ ++.+|++.+++. + +++|++++|+||
T Consensus 100 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~---~--~~~v~i~~p~np 173 (391)
T 3h14_A 100 SSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDL-PTAPENRLQPVPADFAGL---D--LAGLMVASPANP 173 (391)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECCGGGTTSCCHHHHTTS---C--CSEEEEESSCTT
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-ecCcccCCCCCHHHHHhc---C--CeEEEECCCCCC
Confidence 9999999999999999999999999999999999999999999 88754 477899998876 3 499999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
||.+++.+++++|+++|++||+++|+||+|+.+.+++...... ..+++++++|+||.+|++|+|+||++.+ +++++
T Consensus 174 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~ 250 (391)
T 3h14_A 174 TGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVP---EDQVR 250 (391)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECC---GGGHH
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeC---HHHHH
Confidence 9999999999999999999999999999999988766433222 2467899999999999899999999998 67888
Q ss_pred HHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768 256 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 335 (400)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (400)
.+.......+++++.+.+.++..+++ ..+++.+.++++.++++.+.+.|++++...+..+.+++++|+.++....+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (391)
T 3h14_A 251 VVERIAQNMFICAPHASQVAALAALD-CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRA 329 (391)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHH
T ss_pred HHHHHHhhhccCCCHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHH
Confidence 88877777788899999999988888 56788899999999999999999988775556777789999999764457889
Q ss_pred HHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhccCcc
Q 015768 336 VVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVKDGMV 392 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 392 (400)
++.++++++||.+.||..|+. ++++|++++. +++++++++++|++++++.......
T Consensus 330 ~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~~~~~~~~~~~ 388 (391)
T 3h14_A 330 FAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR-ATADIEEGLDRLEAFMQARGEGHHH 388 (391)
T ss_dssp HHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhcccccc
Confidence 999888667999999998875 6799999997 8999999999999999987665433
No 5
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=2.8e-48 Score=367.56 Aligned_cols=362 Identities=22% Similarity=0.313 Sum_probs=313.2
Q ss_pred HHHhhhcCchHHHHHHHHHh-----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768 8 AKRALETEMPIMVQIQELVR-----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+.++.......+..+.+..+ +++++|+|+.++++++.|+.+++++.+.+.. ...|++..|..++++++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~ 80 (396)
T 3jtx_A 3 NTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHE--LEKYPLTAGLPELRQACANWLK 80 (396)
T ss_dssp HHHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHHHHH
Confidence 45666666666666655543 4688999999999999999999999998863 6678878889999999999999
Q ss_pred hhcCC---CCC-cEEEeCChHHHHHHHHHHhcCCC-----CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHH
Q 015768 83 QENKL---YKS-SVMVTAGANQAFVNIVLTLCDAG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDAD 153 (400)
Q Consensus 83 ~~~~~---~~~-~i~~~~g~t~a~~~~~~~l~~~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e 153 (400)
+.+|+ +++ +|++|+|+++++..++.++.++| |+|+++.|+|+++...++..|++++.+ |.+++|+.+|++
T Consensus 81 ~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~g~~~d~~ 159 (396)
T 3jtx_A 81 RRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFA-NCPAPSFNPDWR 159 (396)
T ss_dssp HHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEE-ECCTTTCCCCGG
T ss_pred HhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEe-ecCCCCCccCHH
Confidence 98885 478 99999999999999999999997 799999999999999999999999999 888888888999
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC-CCcccc--------CCCcE
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG-RKHCCV--------EGDHV 224 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~~~--------~~~~~ 224 (400)
.+++.+++++ ++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++ .+.... ..+++
T Consensus 160 ~l~~~~~~~~--~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (396)
T 3jtx_A 160 SISEEVWKRT--KLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKL 237 (396)
T ss_dssp GSCHHHHHTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTE
T ss_pred HHHHhhccCc--EEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcE
Confidence 9999988754 999999999999999999999999999999999999999999988766 222211 26789
Q ss_pred EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (400)
+++.|+||.++++|+|+||++.+ +++++.+.......+++++.+.+.++..+++. .+++.+.++.+.++++.+.+.
T Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~ 313 (396)
T 3jtx_A 238 LMFTSLSKRSNVPGLRSGFVAGD---AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD-EQHVIDNRRLYQEKFERVIPI 313 (396)
T ss_dssp EEEEESTTTSSCGGGCCEEEEEC---HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccccccCCcccceEEEEeC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998899999999988 88988888877666788999999999999986 678889999999999999999
Q ss_pred hccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--------CCeEEEEeccCCHHHHHHHH
Q 015768 305 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--------RGHLRISFGGLVEDDCKAAA 376 (400)
Q Consensus 305 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--------~~~iRi~~~~~~~~~~~~~~ 376 (400)
|+++ ..+..+.+++++|++++. .+..+++.+|++++||.+.||..|+. ++++||+++. +++++++++
T Consensus 314 l~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~-~~~~i~~~l 388 (396)
T 3jtx_A 314 LQQV--FDVKLPDASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVA-DVATCVKAA 388 (396)
T ss_dssp HTTT--SCCCCCSSSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCS-CHHHHHHHH
T ss_pred HHhc--CCccCCCeeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcC-CHHHHHHHH
Confidence 9886 245667779999999986 36788898887778999999998863 5799999997 999999999
Q ss_pred HHHHHHH
Q 015768 377 DRLRRGL 383 (400)
Q Consensus 377 ~~l~~~l 383 (400)
++|++++
T Consensus 389 ~~l~~~l 395 (396)
T 3jtx_A 389 EDIVSLY 395 (396)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998875
No 6
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=4.3e-48 Score=368.14 Aligned_cols=376 Identities=22% Similarity=0.340 Sum_probs=302.0
Q ss_pred hhHHHHhhhcCchHHHHHHH----HHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQE----LVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
|.+++++.......+..+.. +..+++++|+|+.+.+++++++.+++++.+.+.+.....|++..+..+++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 87 (412)
T 2x5d_A 8 ARRFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHW 87 (412)
T ss_dssp -------------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHH
T ss_pred cchhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence 44666666544333333222 33568899999999998888999999999988764345687778899999999999
Q ss_pred HHhhcCC--CC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHH
Q 015768 81 LNQENKL--YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLE 156 (400)
Q Consensus 81 l~~~~~~--~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~ 156 (400)
+.+.+|+ ++ ++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++ ++.+|++.++
T Consensus 88 ~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~ 166 (412)
T 2x5d_A 88 YRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSV-PLVPGIDFFNELERAI 166 (412)
T ss_dssp HHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEE-ECSTTSCHHHHHHHHH
T ss_pred HHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ecCCccCCCCCHHHHH
Confidence 9888775 56 699999999999999999999999999999999999999999999999999 88765 6667899999
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC---ccccC--CCcEEEEeccc
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVE--GDHVVNLFSFS 231 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~--~~~~i~~~s~s 231 (400)
+.+++++ ++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+.+.. ..... .+++++++|+|
T Consensus 167 ~~i~~~~--~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~s 244 (412)
T 2x5d_A 167 RESIPKP--RMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLS 244 (412)
T ss_dssp HTEESCC--SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC
T ss_pred HhcccCc--eEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCc
Confidence 9987554 99999999999999999999999999999999999999999998875432 11221 46789999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|++|++|+|+||++++ +++++.+.......+++.+.+.+.++..+|+...++++++.++++++++.+.+.|++++ +
T Consensus 245 K~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 320 (412)
T 2x5d_A 245 KSYNMAGWRIGFMVGN---PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREAG-W 320 (412)
T ss_dssp -CCSCTTSCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred cccCCcccceEEEEcC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-C
Confidence 9998899999999998 78888888776666788899999999999987677888999999999999999999874 4
Q ss_pred cccCCCCceEEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 312 AVKGGEGAIYLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.+..+.+++|+|++++... .+..+++.+|++++||.+.||..|. .++++||+++. +++++++++++|+++++++.
T Consensus 321 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~ 399 (412)
T 2x5d_A 321 MVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE-NRDRLRQAVRGIKAMFRADG 399 (412)
T ss_dssp CCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHTT
T ss_pred EecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhcC
Confidence 6667777889999997432 1567888888766899999998885 36899999997 89999999999999998754
Q ss_pred c
Q 015768 388 K 388 (400)
Q Consensus 388 ~ 388 (400)
.
T Consensus 400 ~ 400 (412)
T 2x5d_A 400 L 400 (412)
T ss_dssp C
T ss_pred C
Confidence 3
No 7
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.4e-48 Score=370.32 Aligned_cols=370 Identities=20% Similarity=0.301 Sum_probs=308.3
Q ss_pred HHHhhhcCchHHHHHHHHHh--cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc
Q 015768 8 AKRALETEMPIMVQIQELVR--GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~ 85 (400)
++++.+.....+..+..... .++++|+|+.+.++++.++.+++++.+.+.+.....|++..+..++++++++++.+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~ 102 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQY 102 (404)
T ss_dssp CHHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 66666554444444444433 3567999999999888889999999998865334468766789999999999998888
Q ss_pred CCC--C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 86 KLY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 86 ~~~--~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
|++ + ++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++++.+|++.+++.++++
T Consensus 103 g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~ 181 (404)
T 2o1b_A 103 NVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPL-NLEPPHYLPDWSKVDSQIIDK 181 (404)
T ss_dssp CCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEE-ECCTTTCCCCGGGSCHHHHHH
T ss_pred CCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEe-ccCcccCcCCHHHHHHhhccC
Confidence 864 4 799999999999999999999999999999999999999999999999999 887777778999999988754
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCCc
Q 015768 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~g 238 (400)
+ ++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++.... .. ..+++++++|+||++|++|
T Consensus 182 ~--~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 259 (404)
T 2o1b_A 182 T--KLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSG 259 (404)
T ss_dssp E--EEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGG
T ss_pred c--eEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCch
Confidence 4 9999999999999999999999999999999999999999999887542211 11 1257899999999998899
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 318 (400)
+|+||++.+ +++++.+.......+++++.+.+.++..+|+.+.+++++.++.++++++.+.+.|++++ +.+..+.+
T Consensus 260 ~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~ 335 (404)
T 2o1b_A 260 FRVGFAVGN---KDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD-LPFVHAKG 335 (404)
T ss_dssp GCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-CCEECCCB
T ss_pred hheEeEecC---HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC-CeecCCCc
Confidence 999999988 78888888776666778899999999999987667788889999999999999999885 46777777
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
++++|++++.. .+..+++.++++++||.+.||..|+. ++++||+++. +++++++++++|+++++++
T Consensus 336 g~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 336 GIYVWLETPPG-YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL-DDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp SSEEEEECCTT-CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-CTTHHHHHHHHHHGGGGGG
T ss_pred ceEEEEeCCCC-CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHhh
Confidence 88999999753 36778888887678999999988863 6899999997 8899999999999887653
No 8
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=5.1e-48 Score=368.79 Aligned_cols=372 Identities=22% Similarity=0.352 Sum_probs=319.4
Q ss_pred hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-CCCCCCCCCcHHHHHHHHHHHHh
Q 015768 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-ISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
+.+++|+.....+.+.++.+... ++++|+|+.|.+++++|+.+++++.+.+.++. ...|++..+..++++++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~ 82 (422)
T 3fvs_A 4 QLQARRLDGIDYNPWVEFVKLAS-EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGE 82 (422)
T ss_dssp CCSCGGGTTCCCCHHHHHHHHHH-TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhHHHHhhccCccHHHHHHHHhh-cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence 45788888888888888877654 47999999999999999999999999987753 46788778899999999999998
Q ss_pred hcCCC--C-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-----------CCCC
Q 015768 84 ENKLY--K-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-----------KTLH 149 (400)
Q Consensus 84 ~~~~~--~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~ 149 (400)
.+|++ + ++|++|+|++++++.++.++.++||+|+++.|+|+++...++..|.+++.+ |.++ .++.
T Consensus 83 ~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~G~~~~~~~~~ 161 (422)
T 3fvs_A 83 LLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFV-SLKPGPIQNGELGSSSNWQ 161 (422)
T ss_dssp HHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECBCCCCCSSSCCBGGGSB
T ss_pred hhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEE-ecccccccccccccccCCC
Confidence 88754 5 689999999999999999999999999999999999999999999999999 8765 2456
Q ss_pred CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcE
Q 015768 150 PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHV 224 (400)
Q Consensus 150 ~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~ 224 (400)
+|++.+++.+++++ ++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.... .. ..+++
T Consensus 162 ~d~~~l~~~~~~~~--~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (422)
T 3fvs_A 162 LDPMELAGKFTSRT--KALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERT 239 (422)
T ss_dssp CCHHHHHTTCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred CCHHHHHhhcCCCc--eEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcE
Confidence 89999999997654 9999999999999999999999999999999999999999999887654221 11 23678
Q ss_pred EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-------CcHHHHHHHHHHHHH
Q 015768 225 VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRN 297 (400)
Q Consensus 225 i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~ 297 (400)
+++.|+||.+|++|+|+||++.+ +++++.+.......+++++.+.+.++..+++. ..++++++.+.++++
T Consensus 240 i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 316 (422)
T 3fvs_A 240 LTIGSAGKTFSATGWKVGWVLGP---DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC 316 (422)
T ss_dssp EEEEEHHHHHTCGGGCCEEEECC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHH
T ss_pred EEEecchhccCCccceEEEEEeC---HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHH
Confidence 99999999999899999999998 78888888777767888899999999999873 356788899999999
Q ss_pred HHHHHHHhccCCCCcccCCCCceEEEeeCCCCC---CC---------HHHHHHHHHHhcCeEEeCCCccC-------CCC
Q 015768 298 REIIREALSPLGEGAVKGGEGAIYLWARLPEKH---LD---------DFEVVRWLAHRHGVVVIPGGACG-------CRG 358 (400)
Q Consensus 298 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~l~~~~gi~v~~g~~~~-------~~~ 358 (400)
++.+.+.|++++ +.+..+.+++++|++++... .+ ..+++.++++++||.+.||..|+ ..+
T Consensus 317 ~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~ 395 (422)
T 3fvs_A 317 RDHMIRSLQSVG-LKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDH 395 (422)
T ss_dssp HHHHHHHHHTTT-CEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCS
T ss_pred HHHHHHHHHHcC-CeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCC
Confidence 999999999985 47677888999999875310 01 45788888878899999999884 368
Q ss_pred eEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 359 HLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 359 ~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
++||+++. +++++++++++|++++++
T Consensus 396 ~iRis~~~-~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 396 YIRFCFVK-DEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEEEECCC-CHHHHHHHHHHHHHHHHC
T ss_pred eEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence 99999997 999999999999998864
No 9
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.2e-47 Score=368.17 Aligned_cols=372 Identities=24% Similarity=0.394 Sum_probs=313.0
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHH
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+|+|+.....+...++.+... ++++|+|+.|.++. .+++++.+++.+.+.+.. ...|++..|..++++++++++.
T Consensus 54 ~s~~~~~~~~s~~~~~~~~~~-~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 132 (448)
T 3aow_A 54 FSKKALEMRASEVRELLKLVE-TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLG 132 (448)
T ss_dssp CCHHHHHCCCCHHHHHHHHHH-TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred hhHHHhcCCCcHHHHHHHhcc-CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHH
Confidence 677777766666666666544 57899999998765 367888888888876531 3578888899999999999998
Q ss_pred hhcCC-CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-
Q 015768 83 QENKL-YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE- 160 (400)
Q Consensus 83 ~~~~~-~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~- 160 (400)
+.+|+ ++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|++++.+ |.+++| +|++.|++.++
T Consensus 133 ~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~L~~~l~~ 209 (448)
T 3aow_A 133 KRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQI-PLDDEG--MKVEILEEKLKE 209 (448)
T ss_dssp HHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTE--ECHHHHHHHHHH
T ss_pred HhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEe-ccCCCC--CCHHHHHHHHhh
Confidence 88888 78999999999999999999999999999999999999999999999999999 887664 79999999987
Q ss_pred ---cCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc---ccc-CCCcEEEEecccc
Q 015768 161 ---TKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCV-EGDHVVNLFSFSK 232 (400)
Q Consensus 161 ---~~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~-~~~~~i~~~s~sK 232 (400)
+...+++|+ +++|+||||.+++.+++++|.++|++||+++|+||+|+.+.+++... ... ..+++++++|+||
T Consensus 210 ~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK 289 (448)
T 3aow_A 210 LKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK 289 (448)
T ss_dssp HHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTT
T ss_pred hhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchh
Confidence 422358875 56899999999999999999999999999999999999988765422 111 2467899999999
Q ss_pred ccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhcc-CC
Q 015768 233 AYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSP-LG 309 (400)
Q Consensus 233 ~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~-~~ 309 (400)
.+| +|+|+||++++ +++++.+.......+++++.+.+.++..+|+.+ .+++.++++.++++++.+.+.|++ ++
T Consensus 290 ~~~-~GlriG~v~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 365 (448)
T 3aow_A 290 ILA-PGFRIGWMVGD---PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMP 365 (448)
T ss_dssp TTC-GGGCCEEEEEC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hcc-ccccEEEEEeC---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 998 99999999998 788888887766556778999999999999875 467788888899999999999987 45
Q ss_pred -CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 310 -EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 310 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
++.+..|.+++|+|++++.. .+..+++.+++ ++||.+.||..|. .++++|++++..+++++++++++|.++++
T Consensus 366 ~g~~~~~p~~g~~~~v~~~~~-~~~~~l~~~l~-~~gV~v~pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 366 EGVKWTKPEGGMFIWVTLPDG-IDSKKMLERAI-KKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp TTCEECCCSBSSEEEEECSTT-CCHHHHHHHHH-HTTEECEEGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred CCeEEeCCCccEEEEEEcCCC-CCHHHHHHHHH-HCCcEEEcchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 46777788899999999864 36788988887 5699999998884 36799999987679999999999999998
Q ss_pred HHhc
Q 015768 385 ELVK 388 (400)
Q Consensus 385 ~~~~ 388 (400)
++.+
T Consensus 444 ~~~~ 447 (448)
T 3aow_A 444 EELK 447 (448)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8754
No 10
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-47 Score=360.87 Aligned_cols=365 Identities=24% Similarity=0.363 Sum_probs=310.7
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~ 86 (400)
.++|+.....+.+..+.++... +++|+|+.+.+++++++.+.+++.+.+.++ ...|++..+..++++++++++.+.+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g 85 (386)
T 1u08_A 8 PQSKLPQLGTTIFTQMSALAQQ-HQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYG 85 (386)
T ss_dssp CCCSCCCCCCCHHHHHHHHHHH-TTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHS
T ss_pred cchhhhcCCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 4666666666777776666544 689999999998888999999999988763 45787777899999999999988877
Q ss_pred --CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768 87 --LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (400)
Q Consensus 87 --~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~ 163 (400)
++++ +|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++++.+|++.+++.++++
T Consensus 86 ~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~- 163 (386)
T 1u08_A 86 YQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRM-ALQPPHFRVDWQEFAALLSER- 163 (386)
T ss_dssp CCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCTTTCCCCHHHHHHHCCTT-
T ss_pred CCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-ecCcccCcCCHHHHHHhhccc-
Confidence 4577 99999999999999999999999999999999999999999999999999 887655678999999999754
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcEEEEeccccccCCCc
Q 015768 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~i~~~s~sK~~g~~g 238 (400)
+++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++.... .. ..+++++++|+||.+|++|
T Consensus 164 -~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 242 (386)
T 1u08_A 164 -TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTG 242 (386)
T ss_dssp -EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGG
T ss_pred -CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcc
Confidence 49999999999999999999999999999999999999999999887653221 11 2468999999999999899
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 318 (400)
+|+||++.+ +++++.+.......+++.+.+.+.++..+|+...+++++++++++++++.+.+.|++++ +.+..+.+
T Consensus 243 ~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~ 318 (386)
T 1u08_A 243 WKVGYCVAP---APISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNESR-LEILPCEG 318 (386)
T ss_dssp GCCEEEECC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSSS-CEECCCCB
T ss_pred cceEEEEcC---HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-CeecCCCc
Confidence 999999998 78888888766555778888999999999986567888899999999999999999885 46777777
Q ss_pred ceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 319 ~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
++++|++++... .+..+++.++++++||.+.||..|. .++++||+++. +++++++++++|++
T Consensus 319 g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 319 TYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAK-KESTLLAAAERLRQ 385 (386)
T ss_dssp SSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCS-CHHHHHHHHHHHTT
T ss_pred eEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcC-CHHHHHHHHHHHhh
Confidence 899999997531 2577888888767899999998774 46799999996 89999999998864
No 11
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=2.2e-47 Score=361.70 Aligned_cols=370 Identities=22% Similarity=0.361 Sum_probs=303.9
Q ss_pred hhHHHHhhhc--CchHHHHHHHHH------hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHH
Q 015768 5 AKLAKRALET--EMPIMVQIQELV------RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPEL 73 (400)
Q Consensus 5 ~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~ 73 (400)
|.+++|+... ..+...++.+.. .+++++|+|+.+++++++++.+.+++.+.+.+.. ...|++..|..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~l 81 (398)
T 3ele_A 2 MVVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVET 81 (398)
T ss_dssp CSSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHH
T ss_pred cchhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHH
Confidence 4466777664 333333333221 1357899999999888889999999999887642 4568888899999
Q ss_pred HHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCC
Q 015768 74 RDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHP 150 (400)
Q Consensus 74 ~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 150 (400)
++++++++.+.+| +++++|++|+|+++++..++.++.++| |+|+++.|+|+++...++..|.+++.+ |.+++++.+
T Consensus 82 r~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~ 160 (398)
T 3ele_A 82 RAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEV-PADTEHFQI 160 (398)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CCCTTTSSC
T ss_pred HHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-ecCCcCCcC
Confidence 9999999998887 568999999999999999999999999 999999999999999999999999999 988777889
Q ss_pred CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH------cCCEEEEcccccccccCCCCc--cccCCC
Q 015768 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA------AGSWLVVDNTYEYFMYDGRKH--CCVEGD 222 (400)
Q Consensus 151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~------~~~~li~D~a~~~~~~~~~~~--~~~~~~ 222 (400)
|++++++.+++++ ++|++++|+||||.+++.+++++|+++|++ ||+++|+||+|+.+.+++... .....+
T Consensus 161 d~~~l~~~l~~~~--~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 238 (398)
T 3ele_A 161 DFDALEERINAHT--RGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYD 238 (398)
T ss_dssp CHHHHHHTCCTTE--EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCS
T ss_pred CHHHHHHHhCcCC--CEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcC
Confidence 9999999997654 999999999999999999999999999999 999999999999988865332 223457
Q ss_pred cEEEEeccccccCCCcceeEEEEccCCcH---HHHHHHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768 223 HVVNLFSFSKAYGMMGWRVGYIAYPSEVE---GFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298 (400)
Q Consensus 223 ~~i~~~s~sK~~g~~g~~~G~i~~~~~~~---~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (400)
++++++|+||.+|++|+|+||++.++... .+.+.+...... .+.+++.+.+.++..+++... ..+.+++++
T Consensus 239 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~ 313 (398)
T 3ele_A 239 NTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-----DINAYKENR 313 (398)
T ss_dssp SEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-----CHHHHHHHH
T ss_pred CeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-----HHHHHHHHH
Confidence 88999999999998999999999985321 233444433322 356678888888888877532 355677888
Q ss_pred HHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHH
Q 015768 299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 378 (400)
Q Consensus 299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~ 378 (400)
+++.+.|++++. .+..+.+++++|++++.. +..++.+.| .++||.+.||..|+.++++||+++ .+++++++++++
T Consensus 314 ~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~--~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~ 388 (398)
T 3ele_A 314 DLLYEGLTRIGY-HCFKPDGAFYMFVKALED--DSNAFCEKA-KEEDVLIVAADGFGCPGWVRISYC-VDREMIKHSMPA 388 (398)
T ss_dssp HHHHHHHHHHTC-CEECCSBSSEEEEECSSS--CHHHHHHHH-HTTTEECEESGGGTCTTEEEEECC-SCHHHHHHHHHH
T ss_pred HHHHHHHHHcCC-eecCCCeeEEEEEEcCCC--CHHHHHHHH-HHCCEEEeCccccCCCCeEEEEec-CCHHHHHHHHHH
Confidence 888888888754 677788889999999753 577888866 589999999999988899999998 599999999999
Q ss_pred HHHHHHHHh
Q 015768 379 LRRGLEELV 387 (400)
Q Consensus 379 l~~~l~~~~ 387 (400)
|+++++++.
T Consensus 389 l~~~l~~~~ 397 (398)
T 3ele_A 389 FEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999998764
No 12
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-47 Score=368.85 Aligned_cols=360 Identities=21% Similarity=0.383 Sum_probs=305.9
Q ss_pred cCchHHHHHHHHHh--------cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc
Q 015768 14 TEMPIMVQIQELVR--------GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN 85 (400)
Q Consensus 14 ~~~~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~ 85 (400)
...+.|..+.++.+ .++++|+|+.|.+++++|+.+.+++.+++.+.....|++..|..++++++++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 112 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTT
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 44556666666552 6789999999999988899999999999876335678888899999999999998887
Q ss_pred CC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-----------CCCCCH
Q 015768 86 KL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-----------TLHPDA 152 (400)
Q Consensus 86 ~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-----------~~~~~~ 152 (400)
|. ++++|++|+|+++|+..++.+++++||+|+++.|+|+++...++..|.+++.+ |.+++ ++.+|+
T Consensus 113 g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~~~~~~~~~d~ 191 (447)
T 3b46_A 113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYV-PINPPKELDQRNTRGEEWTIDF 191 (447)
T ss_dssp TSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-EEECCGGGGTSCBCSTTSEECH
T ss_pred CCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEE-eCCCccccccccccccCcccCH
Confidence 64 56899999999999999999999999999999999999999999999999988 77554 467899
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--cccc---CCCcEEEE
Q 015768 153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--HCCV---EGDHVVNL 227 (400)
Q Consensus 153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~~~~---~~~~~i~~ 227 (400)
+.|++.++++ +++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.. .... ..++++++
T Consensus 192 ~~l~~~l~~~--~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i 269 (447)
T 3b46_A 192 EQFEKAITSK--TKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTV 269 (447)
T ss_dssp HHHHTTCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEE
T ss_pred HHHHHhhccC--CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEE
Confidence 9999999754 499999999999999999999999999999999999999999998876521 1112 24689999
Q ss_pred eccccccCCCcceeEEEEc-cCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMGWRVGYIAY-PSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 228 ~s~sK~~g~~g~~~G~i~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~ 304 (400)
+|+||.+|++|+|+||+++ + +++++.+.......+++.+.+.+.++..+|+.. .++++++++.++++++.+.+.
T Consensus 270 ~S~sK~~~~~G~riG~~~~~~---~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~ 346 (447)
T 3b46_A 270 GSAGKSFAATGWRIGWVLSLN---AELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSI 346 (447)
T ss_dssp EEHHHHTTCTTSCCEEEECSC---HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ecCchhcCCcchhhEEEEeCC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999989999999999 6 788888887666567888999999999999864 466788889999999999999
Q ss_pred hccCCCCcccCCCCceEEEeeCCCC--------------CCCHHHHHHHHHHhcCeEEeCCCccCC-------CCeEEEE
Q 015768 305 LSPLGEGAVKGGEGAIYLWARLPEK--------------HLDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRIS 363 (400)
Q Consensus 305 L~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~~gi~v~~g~~~~~-------~~~iRi~ 363 (400)
|++++. .+..+.+++|+|++++.. ..+..+++.+|++++||.+.||..|+. ++++||+
T Consensus 347 L~~~g~-~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls 425 (447)
T 3b46_A 347 FDELGL-PYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFA 425 (447)
T ss_dssp HHHHTC-CEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEE
T ss_pred HHHCCC-eecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEE
Confidence 998854 667788899999998752 124567888887779999999988753 6899999
Q ss_pred eccCCHHHHHHHHHHHHH
Q 015768 364 FGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 364 ~~~~~~~~~~~~~~~l~~ 381 (400)
++. +++++++++++|++
T Consensus 426 ~~~-~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 426 VCK-DDAYLENAVERLKL 442 (447)
T ss_dssp CCS-CHHHHHHHHHHGGG
T ss_pred EeC-CHHHHHHHHHHHHH
Confidence 996 89999999999876
No 13
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.2e-48 Score=366.09 Aligned_cols=374 Identities=22% Similarity=0.341 Sum_probs=313.0
Q ss_pred hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
|++++|+.....+.+..+.++.. .+++|+|+.+.+++++++.+++++.+.+.++ ...|++..+..++++++++++.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~ 78 (411)
T 2o0r_A 1 MATVSRLRPYATTVFAEMSALAT-RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRH 78 (411)
T ss_dssp -CCCGGGGGGSSCHHHHHHHHHH-TTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CchhhHhHhcCccHHHHHHHHhh-cCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHH
Confidence 45788888877777777766544 4679999999998888999999999998764 457877788999999999999988
Q ss_pred cCC--CCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--CCCCCHHHHHHhh
Q 015768 85 NKL--YKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTL 159 (400)
Q Consensus 85 ~~~--~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l 159 (400)
+|+ +++ +|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++ ++.+|++.+++.+
T Consensus 79 ~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l 157 (411)
T 2o0r_A 79 FGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTV-PLVPDGRGFALDADALRRAV 157 (411)
T ss_dssp HCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHHHC
T ss_pred cCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEe-eccccccCCCCCHHHHHHhh
Confidence 774 577 99999999999999999999999999999999999999999999999999 87654 5668999999999
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--CCCcEEEEecccccc
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--EGDHVVNLFSFSKAY 234 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~~~~~i~~~s~sK~~ 234 (400)
+++ +++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.... .. ..+.++++.|+||.+
T Consensus 158 ~~~--~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~ 235 (411)
T 2o0r_A 158 TPR--TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMF 235 (411)
T ss_dssp CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT
T ss_pred ccC--ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhc
Confidence 764 49999999999999999999999999999999999999999998887553211 11 146799999999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
|++|+|+||++.+ +++++.+.......+++.+.+.+.++..+|+...+++++..+++.++++++.+.|++++ +.+.
T Consensus 236 ~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~ 311 (411)
T 2o0r_A 236 NCTGWKIGWACGP---AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEIG-FAVH 311 (411)
T ss_dssp TCTTTCEEEEECC---HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEC
T ss_pred CCccceEEEEeeC---HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CEec
Confidence 9899999999998 78888887766555677788888888889986567788889999999999999998874 4667
Q ss_pred CCCCceEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccC-------------CCCeEEEEeccCCHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACG-------------CRGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~-------------~~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
.+.+++++|++++.. ..+..+++.+|++++||.+.||..|. .++++||+++. +++++++++++|+
T Consensus 312 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~~~~l~ 390 (411)
T 2o0r_A 312 DSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCK-RDDTLDEAIRRLS 390 (411)
T ss_dssp CCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCS-CHHHHHHHHHHHG
T ss_pred CCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecC-CHHHHHHHHHHHH
Confidence 777788999998752 13577888888767899999998772 24689999986 8999999999999
Q ss_pred HHHHHHhc
Q 015768 381 RGLEELVK 388 (400)
Q Consensus 381 ~~l~~~~~ 388 (400)
+++++...
T Consensus 391 ~~~~~~~~ 398 (411)
T 2o0r_A 391 VLAERPAT 398 (411)
T ss_dssp GGGC----
T ss_pred HHHhccCc
Confidence 88766543
No 14
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=1.9e-47 Score=363.10 Aligned_cols=350 Identities=22% Similarity=0.315 Sum_probs=305.3
Q ss_pred CeEEcCCCCCC-CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--C-CcEEEeCChHHHHHHHH
Q 015768 31 NAVSLAQGVVY-WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--K-SSVMVTAGANQAFVNIV 106 (400)
Q Consensus 31 ~~i~~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~-~~i~~~~g~t~a~~~~~ 106 (400)
++|+|++|++. +++++.+++++.+.+.+.....|++..+..++++++++++.+.+|.+ + +++++|+|+++++..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 48999998754 78899999999998876444468778899999999999999988864 3 79999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-----CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-----SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
.++.++||+|+++.|+|.++...++..|++++.+ |.+ ++++.+|++.+++.+++++ ++|++++|+||||.++
T Consensus 120 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~--~~v~~~~p~nptG~~~ 196 (407)
T 3nra_A 120 AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV-QLDYVSADETRAGLDLTGLEEAFKAGA--RVFLFSNPNNPAGVVY 196 (407)
T ss_dssp HTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EBCCCSSCCSSCCBCHHHHHHHHHTTC--CEEEEESSCTTTCCCC
T ss_pred HHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEe-ecccccccCcCCCcCHHHHHHHHhhCC--cEEEEcCCCCCCCccc
Confidence 9999999999999999999999999999999999 773 2456789999999998754 8999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc------cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC------VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
+.+++++|+++|++||+++|+||+|+.+.+++..... ...+++++++|+||.+|++|+|+||++.+ +++++
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~ 273 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS---RAIIA 273 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC---HHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC---HHHHH
Confidence 9999999999999999999999999998876543322 22567899999999999899999999998 88989
Q ss_pred HHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768 256 QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 335 (400)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (400)
.+.......+++.+.+.+.++..+++...+++++..++++++++++.+.|++++.+.+..+.+++++|+.++....+..+
T Consensus 274 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (407)
T 3nra_A 274 RMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAE 353 (407)
T ss_dssp HHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHH
T ss_pred HHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHH
Confidence 88887777778888899998888888656778888999999999999999998776777788789999999874457888
Q ss_pred HHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 336 VVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+..+|++++||.+.+|..|+ .++++||+++. +++++++++++|+++++++.
T Consensus 354 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 354 FVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQ-DHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp HHHHHHHHHCEECEEGGGTCTTCTTBEEEECCS-CHHHHHHHHHHHHHHHHHHB
T ss_pred HHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHHHhh
Confidence 99988767899999999886 57899999996 99999999999999998764
No 15
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=7.6e-47 Score=356.81 Aligned_cols=363 Identities=27% Similarity=0.433 Sum_probs=305.3
Q ss_pred HHHHhhhcCchHH----HHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768 7 LAKRALETEMPIM----VQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 7 ~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+++|+.....+.+ ....+..+.++++++|+.+.++++.++.+++++.+.+.+. ...|++..+..++++++++++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~la~~~~ 92 (389)
T 1o4s_A 14 VSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELREGIAKRIG 92 (389)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHH
Confidence 3455554433322 2333333467899999999998888899999999988764 3468777789999999999998
Q ss_pred hhcCC--CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768 83 QENKL--YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL 159 (400)
Q Consensus 83 ~~~~~--~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l 159 (400)
+.+|+ +++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++.+++.+
T Consensus 93 ~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l 171 (389)
T 1o4s_A 93 ERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVV-ETFMSKNFQPSLEEVEGLL 171 (389)
T ss_dssp HHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECCGGGTTCCCHHHHHHTC
T ss_pred HHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecCCccCCCCCHHHHHHhc
Confidence 88775 67899999999999999999999999999999999999999999999999999 8775 46778999999999
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--cccC--CCcEEEEeccccccC
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVE--GDHVVNLFSFSKAYG 235 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~--~~~~i~~~s~sK~~g 235 (400)
+++ +++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++... .... .+++++++|+||++|
T Consensus 172 ~~~--~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~ 249 (389)
T 1o4s_A 172 VGK--TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHS 249 (389)
T ss_dssp CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTT
T ss_pred ccC--ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcC
Confidence 765 4899999999999999999999999999999999999999999888754211 1111 478999999999998
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (400)
++|+|+||++++ +++++.+.......+++.+.+.+.++..+|+.+ .++..+++.++++.+.+.|++++ +.+..
T Consensus 250 ~~G~r~G~l~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 322 (389)
T 1o4s_A 250 MTGWRVGYLISS---EKVATAVSKIQSHTTSCINTVAQYAALKALEVD---NSYMVQTFKERKNFVVERLKKMG-VKFVE 322 (389)
T ss_dssp CGGGCCEEEECC---HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC---CHHHHHHHHHHHHHHHHHHHHTT-CCCCC
T ss_pred CcccceEEEEeC---HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcC-Ceeec
Confidence 899999999998 788888887766566788899999999999864 56778888999999999998884 46666
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+.+++++|++++ .+..++..+|++++||.+.||..|+.++++|++++. +++++++++++|.++++
T Consensus 323 ~~~~~~~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 323 PEGAFYLFFKVR---GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFAT-SIERLTEALDRIEDFLN 387 (389)
T ss_dssp CSBSSEEEEECS---SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEEeCC---CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 777889999987 367888888876889999999888777899999996 99999999999998874
No 16
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2.3e-47 Score=365.06 Aligned_cols=369 Identities=22% Similarity=0.359 Sum_probs=311.7
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
+++|+.......+..+.++.. .+++|+|+.+.+++++++.+++++.+.+.+. ....|++..+..++++++++++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~ 93 (429)
T 1yiz_A 15 LPKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQL 93 (429)
T ss_dssp SSSSCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHH
T ss_pred hhHHhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHH
Confidence 456666666666766666544 4689999999998888999999999988763 2456877778999999999999888
Q ss_pred cC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC---------CCCCCH
Q 015768 85 NK--LYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK---------TLHPDA 152 (400)
Q Consensus 85 ~~--~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~ 152 (400)
+| ++++ +|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++ ++.+|+
T Consensus 94 ~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~ 172 (429)
T 1yiz_A 94 VDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFI-PLKPNKTGGTISSADWVLDN 172 (429)
T ss_dssp HTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECBCCCSSSSEEGGGCBCCH
T ss_pred hCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-eCCcccccccccccCcccCH
Confidence 77 4578 99999999999999999999999999999999999999999999999999 87764 467899
Q ss_pred HHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc---ccc--CCCcEEEE
Q 015768 153 DWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCV--EGDHVVNL 227 (400)
Q Consensus 153 e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~--~~~~~i~~ 227 (400)
+.+++.++++ +++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++... ... ..++++++
T Consensus 173 ~~l~~~l~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 250 (429)
T 1yiz_A 173 NELEALFNEK--TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITI 250 (429)
T ss_dssp HHHHHHCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEE
T ss_pred HHHHHHhccC--ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEE
Confidence 9999999754 4999999999999999999999999999999999999999999988765322 112 24689999
Q ss_pred eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-----C--cHHHHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-----G--PEWVTERVKDLVRNREI 300 (400)
Q Consensus 228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~--~~~~~~~~~~~~~~~~~ 300 (400)
.|+||.+|++|+|+||++++ +++++.+.......+++.+++.+.++..+|+. + .+++++.++.++++++.
T Consensus 251 ~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (429)
T 1yiz_A 251 GSAGKTFSLTGWKIGWAYGP---EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDY 327 (429)
T ss_dssp EEHHHHHTCGGGCCEEEESC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHH
T ss_pred ecchhccCCCCcceEEEEeC---HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHH
Confidence 99999998899999999998 78888888776666788899999999999986 5 57788889999999999
Q ss_pred HHHHhccCCCCcccCCCCceEEEeeCCCCC-----------CCHHHHHHHHHHhcCeEEeCCCccCC-------CCeEEE
Q 015768 301 IREALSPLGEGAVKGGEGAIYLWARLPEKH-----------LDDFEVVRWLAHRHGVVVIPGGACGC-------RGHLRI 362 (400)
Q Consensus 301 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~gi~v~~g~~~~~-------~~~iRi 362 (400)
+.+.|++++ +.+..+.+++++|++++... .+..+++.+|++++||.+.||..|.. ++++||
T Consensus 328 l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRi 406 (429)
T 1yiz_A 328 MASFLAEVG-MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRY 406 (429)
T ss_dssp HHHHHHHHT-CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEE
T ss_pred HHHHHHhCC-CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEE
Confidence 999998875 46666777899999987531 24567888787689999999987752 689999
Q ss_pred EeccCCHHHHHHHHHHHHHHHH
Q 015768 363 SFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+++. +++++++++++|+++++
T Consensus 407 s~~~-~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 407 CFFK-KDENLQKAAEILRKWKG 427 (429)
T ss_dssp ECCS-CHHHHHHHHHHHHHHSC
T ss_pred EecC-CHHHHHHHHHHHHHhcc
Confidence 9996 99999999999998764
No 17
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=3.8e-47 Score=357.28 Aligned_cols=345 Identities=22% Similarity=0.353 Sum_probs=297.3
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CC-cEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KS-SVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~-~i~~~~g~t~a~~ 103 (400)
+.|+++|+|+.+.++++.++.+++++.+.+.++....|++..+..++++++++++.+.+|++ ++ +|++|+|+++++.
T Consensus 22 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~ 101 (376)
T 2dou_A 22 ERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLA 101 (376)
T ss_dssp HTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHH
T ss_pred ccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence 56788999999999888899999999998866435567654578899999999998888764 45 9999999999999
Q ss_pred HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015768 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (400)
Q Consensus 104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~ 183 (400)
.++.++.++||+|+++.|+|+++...++..|++++.+ |. ++++.+|++.+++.+++++ ++|++++|+||||.++|.
T Consensus 102 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~-~~-~~~~~~d~~~l~~~l~~~~--~~v~l~~p~nptG~~~~~ 177 (376)
T 2dou_A 102 HLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLI-PL-REDGLADLKAVPEGVWREA--KVLLLNYPNNPTGAVADW 177 (376)
T ss_dssp HHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEE-CB-CTTSSBCGGGSCHHHHHHE--EEEEECSSCTTTCCCCCH
T ss_pred HHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEe-eC-CCCCCCCHHHHHHhhccCc--eEEEECCCCCCcCccCCH
Confidence 9999999999999999999999999999999999999 87 6777789999999887544 999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc----CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+++++|+++|++||+++|+||+|+.+.+++...... ..+++++++|+||.+|++|+|+||++.+ +++++.+..
T Consensus 178 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~ 254 (376)
T 2dou_A 178 GYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS---EEALARLER 254 (376)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC---HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC---HHHHHHHHH
Confidence 999999999999999999999999988765321111 2367899999999998899999999988 788888887
Q ss_pred hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHH
Q 015768 260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRW 339 (400)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (400)
.....+++.+.+.+.++..+|+...+++++.++.++++++.+.+.|+++ +.+..+.+++++|++++.. .+..++..+
T Consensus 255 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 331 (376)
T 2dou_A 255 VKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEG-VDDLEFGLR 331 (376)
T ss_dssp HHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTT-CCHHHHHHH
T ss_pred HHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCC-CCHHHHHHH
Confidence 7666667789999999999998766778888999999999999999987 4677777789999999753 367788888
Q ss_pred HHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 340 LAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 340 l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
|. ++||.+.||..|+. ++++||+++. +++++++++++|++++
T Consensus 332 l~-~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 332 LV-ERGVALAPGRGFGPGGKGFVRIALVR-PLEELLEAAKRIREAL 375 (376)
T ss_dssp HH-HTTEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHTC
T ss_pred HH-HCCEEEcCchhhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHh
Confidence 87 56999999988863 6899999996 8999999999998764
No 18
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=5.6e-47 Score=356.19 Aligned_cols=347 Identities=15% Similarity=0.222 Sum_probs=302.0
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~ 104 (400)
.+|+++++|+.+.+++++++++++++.+.+.+. ...|++ .+ .++++++++++.+.+| ++++++++|+|++++++.
T Consensus 20 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~ 96 (377)
T 3fdb_A 20 RYGQGVLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYI 96 (377)
T ss_dssp SSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHH
T ss_pred ccCCCeeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHH
Confidence 468899999999999999999999999998764 456876 66 8999999999988877 458899999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
++.++.++||+|+++.|+|+++...++..|++++.+ |.+++ +|++.+++.+++++ +++++++|+||||.+++.+
T Consensus 97 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~---~d~~~l~~~l~~~~--~~v~i~~p~nptG~~~~~~ 170 (377)
T 3fdb_A 97 AIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFI-DATGG---INLHDVEKGFQAGA--RSILLCNPYNPLGMVFAPE 170 (377)
T ss_dssp HHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEE-ECTTS---CCHHHHHHHHHTTC--CEEEEESSBTTTTBCCCHH
T ss_pred HHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEc-cCCCC---CCHHHHHHHhccCC--CEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999 88765 79999999998765 8999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCC-CCcccc----CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDG-RKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~-~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
++++|+++|++||+++|+||+|+.+.+++ ...... ..+++++++|+||.+|++|+|+||++..+ +++++.+..
T Consensus 171 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~~~~ 248 (377)
T 3fdb_A 171 WLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN--PSDAEHWQQ 248 (377)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS--HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC--HHHHHHHHH
Confidence 99999999999999999999999988866 222221 14677999999999988999999988754 788888887
Q ss_pred hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHHH
Q 015768 260 VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVR 338 (400)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (400)
.....+++++++.+.++..+++...++++++.++++++++.+.+.|++ ++++.+..+.+++++|++++....+ .+++.
T Consensus 249 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 327 (377)
T 3fdb_A 249 LSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTIE-GSPSE 327 (377)
T ss_dssp SCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCCC-SCHHH
T ss_pred HHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCCC-HHHHH
Confidence 766667789999999999999876677889999999999999999998 6667888888888889999864323 56777
Q ss_pred HHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 339 WLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 339 ~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+++++||.+.||..|+. ++++|++++. +++++++++++|+++++++
T Consensus 328 ~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~-~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 328 FFIEKAKVAMNDGAWFGEDGTGFCRLNFAT-SREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp HHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCEEecCChhccCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhc
Confidence 787677999999998874 7899999996 8999999999999998653
No 19
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.6e-46 Score=352.37 Aligned_cols=347 Identities=18% Similarity=0.276 Sum_probs=299.4
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~ 105 (400)
+++++++|+.+++++++|+++++++.+.+.+. ...|++. ..++++++++++.+.+| +++++|++|+|++++++.+
T Consensus 22 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 98 (383)
T 3kax_A 22 KNEELIHAWIADMDFEVPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTS 98 (383)
T ss_dssp SSSCCEECCCSSCSSCCCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCCCeeecccccCCCCCCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHH
Confidence 46899999999999999999999999998764 4456443 67899999999999988 6789999999999999999
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~ 183 (400)
+.++.++||+|+++.|+|+++...++..|.+++.+ |.+++ ++.+|++.+++.+++++ ++|++++|+||||.++|.
T Consensus 99 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~l~~~~--~~v~i~~p~nptG~~~~~ 175 (383)
T 3kax_A 99 IQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVS-PLQKQNDTYAIDFEHLEKQFQQGV--KLMLLCSPHNPIGRVWKK 175 (383)
T ss_dssp HHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEEC-CCEEETTEEECCHHHHHHHHTTTC--CEEEEESSBTTTTBCCCH
T ss_pred HHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEec-cceecCCcEEEcHHHHHHHhCcCC--eEEEEeCCCCCCCcCcCH
Confidence 99999999999999999999999999999999999 87632 35689999999996554 999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
+++++|+++|++||+++|+||+|+.+.+++.... ... .++++++.|+||.+|++|+|+||++.++ +++.+.+
T Consensus 176 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~ 253 (383)
T 3kax_A 176 EELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN--EKLRQAF 253 (383)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC--HHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC--HHHHHHH
Confidence 9999999999999999999999999887653221 111 3678999999999998999999999854 7888888
Q ss_pred HHhhccC-CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768 258 LKVQDNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFE 335 (400)
Q Consensus 258 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (400)
....... .++++.+.+.++..+++...++.++..++++++++++.+.|++ ++++.+..+.++++.|+.++....+..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (383)
T 3kax_A 254 TSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDE 333 (383)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHH
T ss_pred HHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCCCHHH
Confidence 7765543 3478999999999999876677888999999999999999988 6667888888889999998764347889
Q ss_pred HHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 336 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
+..+|++++||.+.||..|+. ++++|++++. +++++++++++|++++
T Consensus 334 ~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 334 RTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGC-PRSVLEEILNRLRHTF 382 (383)
T ss_dssp HHHHHHHTSCEECEESGGGCTTCTTEEEEECSS-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCEEeECchhhcCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 999887679999999998864 5899999996 8999999999999876
No 20
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-46 Score=355.54 Aligned_cols=350 Identities=17% Similarity=0.234 Sum_probs=302.2
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~ 105 (400)
.++++|+|+.+++++++|+++++++.+.+.+. ...|++. ..++++++++++.+.+| +++++|++|+|++++++.+
T Consensus 25 ~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~ 101 (391)
T 3dzz_A 25 LKEKELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAM 101 (391)
T ss_dssp CCTTCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHH
T ss_pred cCCCceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHH
Confidence 56799999999999999999999999998764 4456544 68999999999999988 6689999999999999999
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCC
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~ 182 (400)
+.++.++||+|+++.|+|+++...++..|.+++.+ |.+ +..+.+|++.+++.++ ++ +++|++++|+||||.+++
T Consensus 102 ~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~l~~~l~~~~--~~~v~i~~p~nptG~~~~ 178 (391)
T 3dzz_A 102 VRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISS-DLIYENSKYSVNWADLEEKLATPS--VRMMVFCNPHNPIGYAWS 178 (391)
T ss_dssp HHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEEC-CCEEETTEEECCHHHHHHHHTSTT--EEEEEEESSBTTTTBCCC
T ss_pred HHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEe-eeeecCCceeecHHHHHHHHhccC--ceEEEEECCCCCCCcccC
Confidence 99999999999999999999999999999999999 885 3345689999999997 44 599999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
.+++++|+++|++||+++|+|++|+.+.+.+..... .. .++++++.|+||.+|++|+|+||++.++ +++.+.
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~--~~~~~~ 256 (391)
T 3dzz_A 179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN--PDLRAR 256 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS--HHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC--HHHHHH
Confidence 999999999999999999999999988876532221 11 4577999999999998999999999875 678888
Q ss_pred HHHhhc-cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768 257 LLKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 257 l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (400)
+..... ...++++.+.+.++..+++...++.+++.++++++++++.+.|++ ++++.+..+.+++++|+.++....+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (391)
T 3dzz_A 257 AEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAE 336 (391)
T ss_dssp HHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHH
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHH
Confidence 876643 335678889999999888876677889999999999999999998 777788888888999999986434788
Q ss_pred HHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
++..+|++++||.+.||..|+. ++++|++++. +++++++++++|+++++++
T Consensus 337 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 337 DFCKYLREKTGLIISAGNGYRGNGHEFVRINLAC-PKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp HHHHHHHHHHCEECEESGGGCTTGGGEEEEECCS-CHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 8999886689999999998875 4899999995 9999999999999999865
No 21
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=9e-47 Score=358.34 Aligned_cols=372 Identities=26% Similarity=0.394 Sum_probs=308.6
Q ss_pred HHHHhhhcCchHHH---HHHHHHhcCCCeEEcCCCCC---CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 7 LAKRALETEMPIMV---QIQELVRGAKNAVSLAQGVV---YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 7 ~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
.++|+.+...+... ...++.++++++++|+.+.+ +++.++.+++++.+.+.+. ...|++..+..+++++++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~ 90 (406)
T 1xi9_A 12 ASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIVER 90 (406)
T ss_dssp CCHHHHTCCC-------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred HHHHHhcCChhHHHHHHHHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence 45566543332222 44455667889999999998 7788899999999888764 34687777899999999999
Q ss_pred HHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH
Q 015768 81 LNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK 157 (400)
Q Consensus 81 l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~ 157 (400)
+.+.+| ++++++++|+|+++|+..++.++.++||+|+++.|+|+++...++..|++++.+ |.++ +++.+|++.+++
T Consensus 91 l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~ 169 (406)
T 1xi9_A 91 EKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEY-RTIEEEDWQPDIDDIRK 169 (406)
T ss_dssp HHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-EEEGGGTSEECHHHHHH
T ss_pred HHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEe-ecCCCcCCcCCHHHHHH
Confidence 988775 457899999999999999999999999999999999999999999999999999 7765 567789999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCc-EEEEecccccc
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDH-VVNLFSFSKAY 234 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~-~i~~~s~sK~~ 234 (400)
.++++ +++|++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++..... ...++ +++++|+||++
T Consensus 170 ~l~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (406)
T 1xi9_A 170 KITDR--TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVY 247 (406)
T ss_dssp HCCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTT
T ss_pred hhCcC--ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEecccccc
Confidence 99765 499999999999999999999999999999999999999999988774322111 12466 89999999999
Q ss_pred CCCcceeEEEE--ccCCcH----HHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768 235 GMMGWRVGYIA--YPSEVE----GFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 308 (400)
Q Consensus 235 g~~g~~~G~i~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (400)
|++|+|+||++ .+ + ++++.+....... ++++.+.+.++..+|+...++++++.+.+.++++.+.+.|+++
T Consensus 248 ~~~G~r~G~~~~~~~---~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (406)
T 1xi9_A 248 FATGWRLGYMYFVDP---ENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI 323 (406)
T ss_dssp CCGGGCCEEEEEECT---TCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCccEEEEEEEecC---chhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88999999998 77 6 8888887765544 7788899999999997556678888899999999999999988
Q ss_pred CCCcccCCCCceEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 309 GEGAVKGGEGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+++.+..+.+++++|+.++.. ..+..+++.+|++++||.+.+|..|+. ++++||+++ .+++++++++++|++++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~-~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 324 PGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL-PPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp TTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC-SCHHHHHHHHHHHHHHHHH
T ss_pred CCCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec-CCHHHHHHHHHHHHHHHHH
Confidence 665666777788898888641 236778888887688999999988864 789999999 6999999999999999987
Q ss_pred Hh
Q 015768 386 LV 387 (400)
Q Consensus 386 ~~ 387 (400)
+.
T Consensus 403 ~~ 404 (406)
T 1xi9_A 403 RL 404 (406)
T ss_dssp C-
T ss_pred Hh
Confidence 64
No 22
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.5e-46 Score=353.86 Aligned_cols=363 Identities=26% Similarity=0.377 Sum_probs=299.4
Q ss_pred hhHHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 5 AKLAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
|++++|+.....+.+..+.++.+. +++++|+.+.+++++++.+.+++.+.+.+ ...|+...+..++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~--- 74 (381)
T 1v2d_A 1 MRLHPRTEAAKESIFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEEF--- 74 (381)
T ss_dssp CCCCGGGGGC---CHHHHHHHHHH-HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHHH---
T ss_pred CchhhhhhhcCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHhc---
Confidence 446777776666666666665444 67999999999888899999999998876 456877778999999999996
Q ss_pred cCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhccC
Q 015768 85 NKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETK 162 (400)
Q Consensus 85 ~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~~~ 162 (400)
+++++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.+ ++++.+|++.+++.++++
T Consensus 75 -~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l~~~ 152 (381)
T 1v2d_A 75 -AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLV-RLDLTPEGFRLDLSALEKALTPR 152 (381)
T ss_dssp -TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEEETTEEECCHHHHHTTCCTT
T ss_pred -CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-eCCCCCccCCcCHHHHHHhcCcC
Confidence 7778899999999999999999999999999999999999999999999999999 876 444678999999998755
Q ss_pred CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCCcce
Q 015768 163 PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~ 240 (400)
+++|++++|+||||.+++.+++++|.++|++||+++|+|++|+.+.++....... ..+.+++++|+||.+|++|+|
T Consensus 153 --~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r 230 (381)
T 1v2d_A 153 --TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYR 230 (381)
T ss_dssp --EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGC
T ss_pred --CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccc
Confidence 4999999999999999999999999999999999999999999887632111111 357899999999999889999
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768 241 VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 318 (400)
+||++.+ +++++.+.......+++++.+.+.++..+|+.. .+++++..++++++++++.+.|++.+ +.+..+.+
T Consensus 231 ~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~ 306 (381)
T 1v2d_A 231 VGWIVGP---KEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMG-LRVYVPEG 306 (381)
T ss_dssp CEEEECC---TTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTT-CCEECCSB
T ss_pred eEEEEeC---HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHCC-CEecCCCc
Confidence 9999998 677777776655557788899999988888854 46778889999999999999999865 46777777
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC----CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++++|++++.. + ...+++++||.+.||..|.. ++++||+++. +++++++++++|++++++..+
T Consensus 307 ~~~~~~~~~~~--~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 307 TYFLMAELPGW--D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-TEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp SSEEEEECTTC--C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS-CHHHHHHHHHHHHHHC-----
T ss_pred ceEEEEecChH--h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC-CHHHHHHHHHHHHHHHhhccc
Confidence 88999999753 2 44455689999999988863 6799999997 999999999999999887654
No 23
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=5.8e-46 Score=348.44 Aligned_cols=354 Identities=24% Similarity=0.392 Sum_probs=297.4
Q ss_pred HHHhhhcCchHHHHHHHH----HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh
Q 015768 8 AKRALETEMPIMVQIQEL----VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~ 83 (400)
++|+.....+.+.++..+ -+.++++|+|+.+.+++++++.+++++.+.+.+. ...|++..+..++++++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~~~ 81 (370)
T 2z61_A 3 SKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISELYKD 81 (370)
T ss_dssp CHHHHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhhhhccccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHHHH
Confidence 455555443333333332 3457889999999998877899999999988764 45687777899999999999998
Q ss_pred hcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 84 ENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 84 ~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
.+| ++++++++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ | +|++++++.+++
T Consensus 82 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~-------~d~~~l~~~l~~ 153 (370)
T 2z61_A 82 KYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFC-D-------FTVESLEEALSD 153 (370)
T ss_dssp HSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-C-------SSHHHHHHHCCS
T ss_pred HhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEe-C-------CCHHHHHHhccc
Confidence 776 467899999999999999999999999999999999999999999999999988 6 589999999976
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--cc--CCCcEEEEeccccccCCC
Q 015768 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CV--EGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~--~~~~~i~~~s~sK~~g~~ 237 (400)
+ +++|++++|+||||.+++.+ |.++|++||+++|+||+|+.+.+++.... .. ..+++++++|+||.+|++
T Consensus 154 ~--~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 227 (370)
T 2z61_A 154 K--TKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMT 227 (370)
T ss_dssp S--EEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCG
T ss_pred C--ceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCc
Confidence 4 48999999999999999954 99999999999999999998887543221 11 246899999999999889
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC
Q 015768 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG 316 (400)
Q Consensus 238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 316 (400)
|+|+||++++ +++++.+.......+++++.+.+.++..+|+. +.++.++..++++++++.+.+.|++++ +.+..+
T Consensus 228 G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~ 303 (370)
T 2z61_A 228 GWRIGYVISN---DEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFG-WEVNNP 303 (370)
T ss_dssp GGCCEEEECC---HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCCCC
T ss_pred cceEEEEEEC---HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcC-CeecCC
Confidence 9999999999 78888888776666778899999999988875 456778888999999999999999884 466677
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 317 EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
.+++++|+.++. +..++..+|++++||.+.+|..|+. ++++|++++ .+++++++++++|+++++
T Consensus 304 ~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~-~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 304 IGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA-NSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC-SCHHHHHHHHHHHHHHHC
T ss_pred CcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-CCHHHHHHHHHHHHHHHh
Confidence 778999999875 5778888887678999999988863 789999999 499999999999998874
No 24
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=4.5e-46 Score=349.95 Aligned_cols=346 Identities=14% Similarity=0.155 Sum_probs=297.2
Q ss_pred hHHHHHHHHHh----cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCC
Q 015768 17 PIMVQIQELVR----GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKS 90 (400)
Q Consensus 17 ~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~ 90 (400)
..+.++.+.++ ++ ++|+|+.+.++++.|+.+++++.+.+.. ...|++..+..++++++++++.+.+|+ +++
T Consensus 7 ~~~~~~~~~~~~~~~~g-~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~ 83 (376)
T 3ezs_A 7 YPFERLRALLKEITPKK-RGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRRFKIELKEN 83 (376)
T ss_dssp CHHHHHHHHHTTCCCSS-CCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGG
T ss_pred chHHHHHHHHHhhhccC-CEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHH
Confidence 34455555543 34 8999999999998899999999988732 567887788999999999999998887 789
Q ss_pred cEEEeCChHHHHHHHHHHhcCC--CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeE
Q 015768 91 SVMVTAGANQAFVNIVLTLCDA--GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKL 167 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~--gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~ 167 (400)
+|++|+|+++++..++.++.++ ||+|+++.|+|+++...++..|.+++.+ |.+++ ++. + ++++.+.+++ ++
T Consensus 84 ~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~--~-~l~~~~~~~~--~~ 157 (376)
T 3ezs_A 84 ELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLM-PLTKENDFT--P-SLNEKELQEV--DL 157 (376)
T ss_dssp GEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTSC--C-CCCHHHHHHC--SE
T ss_pred HEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEc-ccCCCCCcc--h-hHHhhhccCC--CE
Confidence 9999999999999999999999 9999999999999999999999999999 87765 443 3 5566665554 89
Q ss_pred EEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc---------CCCcEEEEeccccccCCCc
Q 015768 168 VSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---------EGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 168 v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---------~~~~~i~~~s~sK~~g~~g 238 (400)
|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++...... ..++++++.|+||.+|++|
T Consensus 158 v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 237 (376)
T 3ezs_A 158 VILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPG 237 (376)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGG
T ss_pred EEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCcc
Confidence 9999999999999999999999999999999999999999988866332221 4678999999999998899
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG 318 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 318 (400)
+|+||++.+ +++++.+.......+++++.+.+.++..+++. .+++++.++.++++++.+.+.|+ +. . .+.+
T Consensus 238 ~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~--~~-~--~~~~ 308 (376)
T 3ezs_A 238 LRSGFIAGD---SRLLEKYKAFRAYLGYTSANAIQKASEAAWLD-DRHAEFFRNIYANNLKLARKIFK--NT-L--IYPY 308 (376)
T ss_dssp GCCEEEEEC---HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC-SHHHHHHHHHHHHHHHHHHHHST--TC-C--CCSB
T ss_pred ceeEEEeeC---HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHhc--CC-C--CCCc
Confidence 999999988 88999998887777888999999999999986 56788889999999999999998 32 2 5667
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
++++|++++ +..++..+|++++||.+.||..|+ .++++||+++. +++++++++++|++++++
T Consensus 309 ~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 309 SFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVY-DTPLLEKPLEIIETYREN 374 (376)
T ss_dssp SSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCS-CHHHHHHHHHHHHHHHCC
T ss_pred ceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 899999997 578888888755899999999886 46899999986 999999999999998864
No 25
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=3.7e-46 Score=353.30 Aligned_cols=352 Identities=18% Similarity=0.276 Sum_probs=297.4
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~ 107 (400)
+++++|+.+++++++++.+.+++.+.+.+. ...|+.. ..++++++++++.+.+| +++++|++|+|+++++..++.
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~ 107 (399)
T 1c7n_A 31 NEVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVR 107 (399)
T ss_dssp TTCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHH
T ss_pred CCceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHH
Confidence 589999999988888999999999988643 4567543 89999999999988877 668899999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCC-CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~-~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
++.++||+|+++.|+|+++...++..|.+++.+ |.+ ++| +.+|++.+++.++.. .+++|++++|+||||.++|.++
T Consensus 108 ~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~d~~~l~~~l~~~-~~~~v~~~~~~nptG~~~~~~~ 185 (399)
T 1c7n_A 108 EFTKPGDGVIIITPVYYPFFMAIKNQERKIIEC-ELLEKDGYYTIDFQKLEKLSKDK-NNKALLFCSPHNPVGRVWKKDE 185 (399)
T ss_dssp HHCCTTCEEEECSSCCTHHHHHHHTTTCEEEEC-CCEEETTEEECCHHHHHHHHTCT-TEEEEEEESSBTTTTBCCCHHH
T ss_pred HhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEec-ccccCCCCEEEcHHHHHHHhccC-CCcEEEEcCCCCCCCcCcCHHH
Confidence 999999999999999999999999999999998 875 333 568999999999732 2599999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCCc---cccC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+++|+++|++||+++|+||+|+.+.+++... .... .++++++.|+||.+|++|+|+||++.++ +++++.+..
T Consensus 186 l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~l~~ 263 (399)
T 1c7n_A 186 LQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN--PDIRERFTK 263 (399)
T ss_dssp HHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC--HHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC--HHHHHHHHH
Confidence 9999999999999999999999988765322 1111 3678999999999998999999999875 568888877
Q ss_pred hhccCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768 260 VQDNIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVV 337 (400)
Q Consensus 260 ~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (400)
.....++ +++.+.+.++..+++...+++++..+.+.++++.+.+.|++ ++++.+..+.+++++|++++....+..++.
T Consensus 264 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (399)
T 1c7n_A 264 SRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAME 343 (399)
T ss_dssp HHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHH
T ss_pred HHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHH
Confidence 6654444 67899999998888865677888889999999999999998 766677778878888999875323677888
Q ss_pred HHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 338 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
.+|++++||.+.||..|+ .++++||+++. +++++++++++|+++++++.++
T Consensus 344 ~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~l~~~l~~l~~~l~~~~~~ 396 (399)
T 1c7n_A 344 EFMIHKAQIFFDEGYIFGDGGIGFERINLAA-PSSVIQESLERLNKALKDLKNR 396 (399)
T ss_dssp HHHHHTTCCCCEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHhCCEEEeCccccCCCCCCeEEEEecc-CHHHHHHHHHHHHHHHHHHHhc
Confidence 888667899999998886 47899999997 6899999999999999987653
No 26
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2e-46 Score=356.42 Aligned_cols=365 Identities=23% Similarity=0.363 Sum_probs=308.5
Q ss_pred HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC
Q 015768 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL 87 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~ 87 (400)
|+|+.....+.+..+.+. ..++++|+|+.|.+++++|+.+++++.+.+.+.....|++..+..++++++++++.+.+|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~ 80 (410)
T 3e2y_A 2 AKRIEGLDSNVWVEFTKL-AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQR 80 (410)
T ss_dssp CGGGTTCCCCHHHHTTTT-TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTS
T ss_pred chhhccCCccHHHHHHHH-hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCC
Confidence 346666666666666554 4557899999999999999999999999987654567887788999999999999988764
Q ss_pred --CC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC----------CCCCCCHHH
Q 015768 88 --YK-SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS----------KTLHPDADW 154 (400)
Q Consensus 88 --~~-~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~~~e~ 154 (400)
++ ++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++ .++.+|+++
T Consensus 81 ~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~d~~~ 159 (410)
T 3e2y_A 81 QIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFI-PLRSKPTDGMKWTSSDWTFDPRE 159 (410)
T ss_dssp CCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEECCCCSSCCBGGGEECCHHH
T ss_pred CCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEE-eccccccccccccccCCcCCHHH
Confidence 45 799999999999999999999999999999999999999999999999888 7652 345679999
Q ss_pred HHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEec
Q 015768 155 LEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFS 229 (400)
Q Consensus 155 l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s 229 (400)
+++.+++++ ++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..... . ..++++++.|
T Consensus 160 l~~~~~~~~--~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 237 (410)
T 3e2y_A 160 LESKFSSKT--KAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGS 237 (410)
T ss_dssp HHTTCCTTE--EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEE
T ss_pred HHhhcCCCc--eEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEec
Confidence 999987654 99999999999999999999999999999999999999999998876543211 1 2367899999
Q ss_pred cccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHH
Q 015768 230 FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-------GPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~l~ 302 (400)
+||.+|++|+|+||++.+ +++++.+.......+++++.+.+.++..+++. ..++++++.+.++++++.+.
T Consensus 238 ~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 314 (410)
T 3e2y_A 238 AGKTFSVTGWKLGWSIGP---AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMV 314 (410)
T ss_dssp HHHHSSCGGGCCEEEECC---HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCceEEEEEEC---HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHH
Confidence 999999899999999998 78888888877777888999999999998872 34678889999999999999
Q ss_pred HHhccCCCCcccCCCCceEEEeeCCCCC--CC--------HHHHHHHHHHhcCeEEeCCCccCC-------CCeEEEEec
Q 015768 303 EALSPLGEGAVKGGEGAIYLWARLPEKH--LD--------DFEVVRWLAHRHGVVVIPGGACGC-------RGHLRISFG 365 (400)
Q Consensus 303 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~l~~~~gi~v~~g~~~~~-------~~~iRi~~~ 365 (400)
+.|++++. .+..+.+++|+|++++... .+ ..+++.++++++||.+.||..|+. ++++||+++
T Consensus 315 ~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~ 393 (410)
T 3e2y_A 315 RLLNSVGL-KPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFI 393 (410)
T ss_dssp HHHHTTTC-EEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECC
T ss_pred HHHHHCCC-eecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEc
Confidence 99999854 6777888999999876421 11 247778787789999999998853 589999999
Q ss_pred cCCHHHHHHHHHHHHH
Q 015768 366 GLVEDDCKAAADRLRR 381 (400)
Q Consensus 366 ~~~~~~~~~~~~~l~~ 381 (400)
. +++++++++++|++
T Consensus 394 ~-~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 394 K-KDSTLDAAEEIFRA 408 (410)
T ss_dssp C-CHHHHHHHHHHHHT
T ss_pred C-CHHHHHHHHHHHHh
Confidence 7 99999999999875
No 27
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.1e-45 Score=349.28 Aligned_cols=370 Identities=22% Similarity=0.314 Sum_probs=307.8
Q ss_pred HHHHhhhcC----chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768 7 LAKRALETE----MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 7 ~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+++|+.... ...+....+.-+.++++++|+.+.++++.++.+++++ +.+.+. ...|++..+..++++++++++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~la~~~~ 93 (409)
T 2gb3_A 16 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAFASYYK 93 (409)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHHHHHHH
Confidence 456665433 2344445555567889999999999888889999999 888654 4568777889999999999999
Q ss_pred hhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768 83 QENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL 159 (400)
Q Consensus 83 ~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l 159 (400)
+.+| ++++++++|+|+++|+..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++ +++.+ ++.|++.+
T Consensus 94 ~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~-~~~l~~~l 171 (409)
T 2gb3_A 94 RRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPV-TRRMEEGFAI-PQNLESFI 171 (409)
T ss_dssp HTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEE-ECCGGGTSCC-CTTGGGGC
T ss_pred HHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEe-ccCCCCCCcc-HHHHHHhh
Confidence 8776 457899999999999999999999999999999999999999999999999999 8875 45655 88999888
Q ss_pred ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCC
Q 015768 160 ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~ 237 (400)
+++ +++|++++|+||||.+++.+++++|.++|++||+++|+||+|+.+.+++...... ..+++++++|+||++|++
T Consensus 172 ~~~--~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 249 (409)
T 2gb3_A 172 NER--TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSAC 249 (409)
T ss_dssp CTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCG
T ss_pred CcC--CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCc
Confidence 764 4999999999999999999999999999999999999999999887755222211 146789999999999989
Q ss_pred cceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCC
Q 015768 238 GWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGG 316 (400)
Q Consensus 238 g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~ 316 (400)
|+|+||++.++ +++++.+.......+ +++.+.+.++..+|+.+.++++++.+.+.++++.+.+.|++++ +.+ ..+
T Consensus 250 G~r~G~~~~~~--~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~ 325 (409)
T 2gb3_A 250 GARVGCLITRN--EELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHG-LKRFTKP 325 (409)
T ss_dssp GGCCEEEECSC--HHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCBCCC
T ss_pred cceEEEEEECc--HHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHcC-ceeeeCC
Confidence 99999999983 388888877665555 7889999999999976667788888999999999999999884 455 667
Q ss_pred CCceEEEeeCCCCCCCHHHHHHHHHHh-----cCeEEeCCCccCC-----CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 317 EGAIYLWARLPEKHLDDFEVVRWLAHR-----HGVVVIPGGACGC-----RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~gi~v~~g~~~~~-----~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+++++|++++ ..+..++..+|.++ +||.+.||..|+. ++++||+++ ++++++++++++|+++++++
T Consensus 326 ~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~-~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 326 SGAFYITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV-LEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp SBSSEEEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC-SCHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHh
Confidence 77899999987 23678888888754 4999999987753 679999999 59999999999999999887
Q ss_pred hcc
Q 015768 387 VKD 389 (400)
Q Consensus 387 ~~~ 389 (400)
.+.
T Consensus 403 ~~~ 405 (409)
T 2gb3_A 403 CSS 405 (409)
T ss_dssp HC-
T ss_pred hhc
Confidence 643
No 28
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=7.3e-46 Score=354.18 Aligned_cols=353 Identities=19% Similarity=0.227 Sum_probs=300.0
Q ss_pred CCCeEEcCCCCCC----CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHH
Q 015768 29 AKNAVSLAQGVVY----WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAF 102 (400)
Q Consensus 29 ~~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~ 102 (400)
++++|+|+.|.+. +++++.+++++.+.+.+.....|++..+..++++++++++.+. + +++++|++|+|+|+|+
T Consensus 53 ~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al 131 (427)
T 3dyd_A 53 NKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAI 131 (427)
T ss_dssp TSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHH
T ss_pred CCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHH
Confidence 5678999999864 5789999999999887655668988889999999999999654 3 5689999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
+.++.++.++||+|+++.|+|.++...++..|++++.+ |.++ +++.+|++.+++.+++++ ++|++++|+||||.++
T Consensus 132 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~--~~v~i~~p~nptG~~~ 208 (427)
T 3dyd_A 132 DLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLY-NLLPEKSWEIDLKQLEYLIDEKT--ACLIVNNPSNPCGSVF 208 (427)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHSSCCTTE--EEEEEESSCTTTCCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHhccCC--CEEEEECCCCCCCCCC
Confidence 99999999999999999999999999999999999998 7654 456789999999997654 8999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEeccccccCCCcceeEEEEccCCc----HHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV----EGF 253 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~----~~~ 253 (400)
+.+++++|+++|+++|+++|+|++|..+.+++..... .....+++++|+||.++++|+|+||++.++.. +++
T Consensus 209 ~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i 288 (427)
T 3dyd_A 209 SKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEI 288 (427)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHH
Confidence 9999999999999999999999999998876543221 12345788999999998899999999987521 246
Q ss_pred HHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---
Q 015768 254 ATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK--- 329 (400)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--- 329 (400)
.+.+...... +++++.+.+.++..+|+. ..+++.++.++++++++.+.+.|++++++.+..|.+++|+|+.++..
T Consensus 289 ~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~ 367 (427)
T 3dyd_A 289 RDGLVKLSQR-ILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFP 367 (427)
T ss_dssp HHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCT
T ss_pred HHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcC
Confidence 6666655432 577899999999999984 45778889999999999999999998666777788899999887632
Q ss_pred -CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 330 -HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 330 -~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
..+..+++.+|++++||.+.||..|+.++++||+++ .+++++++++++|+++++++.
T Consensus 368 ~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~-~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 368 EFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT-VPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp TCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC-SCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC-CCHHHHHHHHHHHHHHHHHhh
Confidence 135678888887789999999999988999999998 599999999999999998764
No 29
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=3.6e-45 Score=345.53 Aligned_cols=355 Identities=17% Similarity=0.251 Sum_probs=301.2
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEe
Q 015768 18 IMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVT 95 (400)
Q Consensus 18 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~ 95 (400)
.|....+.+ +++++++|+.+++++++|+++++++.+.+.+. ...|+ .+..++++++++++.+.+| ++++++++|
T Consensus 21 ~~d~~~~~~-~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~--~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~ 96 (391)
T 4dq6_A 21 KWSEMEKKY-GTNDLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGYT--TRPDSYNESIVNWLYRRHNWKIKSEWLIYS 96 (391)
T ss_dssp HHHCHHHHH-SCSCSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCB--CCCHHHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred eeeeccccc-CCCCceeccccCCCCCCCHHHHHHHHHHHhCC-CCCCC--CCCHHHHHHHHHHHHHHhCCCCcHHHeEEc
Confidence 344444433 46899999999999999999999999998764 34454 3568999999999999988 678999999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--C-CCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--S-KTLHPDADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~-~~~~~~~e~l~~~l~~~~~~~~v~l~~ 172 (400)
+|++++++.++.++.++||+|+++.|+|+++...++..|++++.+ |.+ + .++.+|++++++.+++ +++|++++
T Consensus 97 ~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~d~~~l~~~l~~---~~~v~i~~ 172 (391)
T 4dq6_A 97 PGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIIS-PLQKLENGNYIMDYEDIENKIKD---VKLFILCN 172 (391)
T ss_dssp SCHHHHHHHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEEC-CCEECTTSCEECCHHHHHHHCTT---EEEEEEES
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEee-eeeecCCCceEeeHHHHHHHhhc---CCEEEEEC
Confidence 999999999999999999999999999999999999999999999 876 3 3456899999999976 49999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cC---CCcEEEEeccccccCCCcceeEEEEc
Q 015768 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VE---GDHVVNLFSFSKAYGMMGWRVGYIAY 246 (400)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~---~~~~i~~~s~sK~~g~~g~~~G~i~~ 246 (400)
|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..... .. .++++++.|+||.+|++|+|+||++.
T Consensus 173 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 252 (391)
T 4dq6_A 173 PHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVL 252 (391)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEe
Confidence 9999999999999999999999999999999999998876543221 11 25679999999999889999999998
Q ss_pred cCCcHHHHHHHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEe
Q 015768 247 PSEVEGFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWA 324 (400)
Q Consensus 247 ~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~ 324 (400)
++ +++.+.+...... ..++++.+.+.++..+++...+++++..++++++++++.+.|++ ++++.+..+.++++.|+
T Consensus 253 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 330 (391)
T 4dq6_A 253 PD--EKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWV 330 (391)
T ss_dssp CS--HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEE
T ss_pred CC--HHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEE
Confidence 85 5788888766433 34578899999999988876677888899999999999999988 67778888888899999
Q ss_pred eCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
+++....+..++...|.+++||.+.||..|+. ++++|++++. +++++++++++|++++
T Consensus 331 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 331 DFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLAC-PRSMLEEALIRIKNAI 390 (391)
T ss_dssp ECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCS-CHHHHHHHHHHHHHHH
T ss_pred EhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 99753347889999887545999999988864 5899999995 9999999999999876
No 30
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2.1e-45 Score=347.12 Aligned_cols=348 Identities=16% Similarity=0.240 Sum_probs=291.8
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHH-HHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPE-LRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~-~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~ 106 (400)
+++++|+.+.+++++++++++++.+.+.+. ...|++. ..+ +++++++++.+.+| +++++|++|+|++++++.++
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~ 104 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELI 104 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHH
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHH
Confidence 579999999998889999999999988653 4567553 678 99999999998887 66899999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC--CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK--TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
.++.++||+|+++.|+|+++...++..|.+++.+ |.+++ ++.+|++.+++.++.. .+++|++++|+||||.++|.+
T Consensus 105 ~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~~d~~~l~~~l~~~-~~~~v~l~~p~nptG~~~~~~ 182 (390)
T 1d2f_A 105 RQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPV-ALEKQADGWFCDMGKLEAVLAKP-ECKIMLLCSPQNPTGKVWTCD 182 (390)
T ss_dssp HHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEE-ECEECSSSEECCHHHHHHHHTST-TEEEEEEESSCTTTCCCCCTT
T ss_pred HHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEe-ecccCCCccccCHHHHHHHhccC-CCeEEEEeCCCCCCCcCcCHH
Confidence 9999999999999999999999999999999999 87644 3457999999999752 259999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCCCc-EEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~~-~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
++++|+++|++||+++|+||+|+.+.+++..... ...+. +. +.|+||.+|++|+|+||++.++ +++.+.+...
T Consensus 183 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~~~~ 259 (390)
T 1d2f_A 183 ELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN--SSSRDAYLSA 259 (390)
T ss_dssp HHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS--HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC--HHHHHHHHHH
Confidence 9999999999999999999999998876533221 11221 45 9999999988999999999864 6788888776
Q ss_pred hc-cCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHH
Q 015768 261 QD-NIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVV 337 (400)
Q Consensus 261 ~~-~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (400)
.. ..++ +++.+.+.++..+++...+++++.++.++++++.+.+.|++ ++++.+..+.+++++|++++....+..++.
T Consensus 260 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 339 (390)
T 1d2f_A 260 LKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQ 339 (390)
T ss_dssp HHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHH
T ss_pred HhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHH
Confidence 55 4454 78899999888888865677888889999999999999988 666677778878888999875323677888
Q ss_pred HHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
..|.+++||.+.||..|+ .++++||+++. +++++++++++|+++++++
T Consensus 340 ~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 340 KALIEQEKVAIMPGYTYGEEGRGFVRLNAGC-PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp HHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCEEeeCccccCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhh
Confidence 888757899999998886 46899999997 7899999999999999765
No 31
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=4.8e-45 Score=346.62 Aligned_cols=373 Identities=24% Similarity=0.358 Sum_probs=305.2
Q ss_pred HHHHhhhcCchHHHHHHHHHh----cCCCeEEcCCCCCCCC--CcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHH
Q 015768 7 LAKRALETEMPIMVQIQELVR----GAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALV 78 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~--~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a 78 (400)
+++|+.....+.+.++.+... .|+++|+|+.|.++.. +++.+.+++.+.+.+.. .. |++..+..+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la 85 (407)
T 2zc0_A 7 LAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELA 85 (407)
T ss_dssp SCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHH
T ss_pred hhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHH
Confidence 667777665555555555433 3458999999886543 67889999988876532 34 877778999999999
Q ss_pred HHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHH
Q 015768 79 KKLNQENK--LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156 (400)
Q Consensus 79 ~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~ 156 (400)
+++.+.+| +++++|++|+|+++|+..++.++.++||+|+++.|+|+++...++..|++++.+ |.++++ +|++.++
T Consensus 86 ~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~--~d~~~l~ 162 (407)
T 2zc0_A 86 AFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGV-PVDNDG--MRVDLLE 162 (407)
T ss_dssp HHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHH
T ss_pred HHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEc-ccCCCC--CCHHHHH
Confidence 99988777 568899999999999999999999999999999999999999999999999999 876654 7999999
Q ss_pred Hhhc----cCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc-CCCcEEEE
Q 015768 157 KTLE----TKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV-EGDHVVNL 227 (400)
Q Consensus 157 ~~l~----~~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~-~~~~~i~~ 227 (400)
+.++ +...+++|+ +++|+||||.++|.+++++|+++|++||+++|+|++|+.+.+++.... .. ..++++++
T Consensus 163 ~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 242 (407)
T 2zc0_A 163 EKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA 242 (407)
T ss_dssp HHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEE
T ss_pred HHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEE
Confidence 9987 522358874 668999999999999999999999999999999999998877553221 11 23578999
Q ss_pred eccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--c-HHHHHHHHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--P-EWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~~l~~~ 304 (400)
+|+||++| +|+|+||++++ +++++.+.......+++.+++.+.++..+++.. . +++++..+.++++++.+.+.
T Consensus 243 ~s~sK~~~-~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 318 (407)
T 2zc0_A 243 GTLSKVLG-TGFRIGWIIAE---GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKA 318 (407)
T ss_dssp EESTTTTC-TTSCCEEEECC---HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHH
T ss_pred cccccccC-CCcceEEEecC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999998 788888888776667778999999999999864 2 45667778888899999999
Q ss_pred hcc-CCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHH
Q 015768 305 LSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 305 L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
|++ .+.+.+..+.+++++|++++.. .+..++..+|.+++||.+.+|..|. .++++||+++..+++++++++++|
T Consensus 319 L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l 397 (407)
T 2zc0_A 319 LENHLPNAEFTKPIAGMFVMFFLPEG-ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSKEEIPIGIKKL 397 (407)
T ss_dssp HHHHCTTSCBCCCSBSSEEEEECSTT-CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCTTHHHHHHHHH
T ss_pred HHHhCCCCEEecCCCcEEEEEEcCCC-CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 987 4555666677789999999753 3678899888755599999998875 357999999875799999999999
Q ss_pred HHHHHHHhc
Q 015768 380 RRGLEELVK 388 (400)
Q Consensus 380 ~~~l~~~~~ 388 (400)
+++++++..
T Consensus 398 ~~~l~~~~~ 406 (407)
T 2zc0_A 398 AKLYKEKFG 406 (407)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhc
Confidence 999987643
No 32
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=5.9e-46 Score=354.33 Aligned_cols=347 Identities=18% Similarity=0.240 Sum_probs=298.4
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~ 106 (400)
++++++|+.++++++.+|++++++.+.+.+. ...|+.. ..++++++++++.+.++ +++++|++++|+++|++.++
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~ 136 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIAL 136 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHH
Confidence 7899999999999999999999999988754 3456433 48999999999999988 66899999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPE 183 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~ 183 (400)
.++.++||+|+++.|+|+++...++..|.+++.+ |.+ +.++.+|++.+++.++ +++ ++|++++|+||+|.+++.
T Consensus 137 ~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~d~~~le~~i~~~~~--~~vil~~p~nptG~~~~~ 213 (421)
T 3l8a_A 137 QAFSEKGDAVLINSPVYYPFARTIRLNDHRLVEN-SLQIINGRFEIDFEQLEKDIIDNNV--KIYLLCSPHNPGGRVWDN 213 (421)
T ss_dssp HHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEE-ECEEETTEEECCHHHHHHHHHHTTE--EEEEEESSBTTTTBCCCH
T ss_pred HHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEec-cccccCCCeeeCHHHHHHHhhccCC--eEEEECCCCCCCCCcCCH
Confidence 9999999999999999999999999999999998 875 3446689999999997 454 999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---ccC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 184 RLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 184 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
+++++|+++|++||+++|+||+|..+.+++.... ... .++++++.|+||.+|++|+|+||++.++ +++.+.+
T Consensus 214 ~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~--~~l~~~~ 291 (421)
T 3l8a_A 214 DDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN--ESLRRKF 291 (421)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS--HHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC--HHHHHHH
Confidence 9999999999999999999999999887654322 111 3678999999999998999999999886 6788887
Q ss_pred HHhhc-cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHH
Q 015768 258 LKVQD-NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 258 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (400)
..... ...++++++.+.++..+++...+++++..+.++++++++.+.|++++.+.+..+.++++.|++++....+..++
T Consensus 292 ~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l 371 (421)
T 3l8a_A 292 QYRQLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQL 371 (421)
T ss_dssp HHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHH
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHH
Confidence 76653 33457899999999999987678889999999999999999998876678888888899999997633467788
Q ss_pred HHHHHHhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 337 VRWLAHRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
...|++++||.+.+|..|+. ++++||+++. +++++++++++|+++++
T Consensus 372 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 372 SEKLQNEAKVVLNDGAHFGKEGKYFARLNVAT-PKNTVQEALSRIISVFG 420 (421)
T ss_dssp HHHHHHTTCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHC-
T ss_pred HHHHHHhCCEEEECchhhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHh
Confidence 88887678999999998863 6899999995 99999999999998875
No 33
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6.6e-46 Score=354.44 Aligned_cols=373 Identities=24% Similarity=0.352 Sum_probs=306.1
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHH
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+++|+.....+.+.++.+. +.++++|+|+.|.++. .+++++.+++.+.+.+.. ...|++..+..++++++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~-~~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~ 99 (425)
T 1vp4_A 21 ISKIGQNMKSSIIREILKF-AADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLE 99 (425)
T ss_dssp CCHHHHTCCCCCHHHHTTT-TTSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHH
T ss_pred hhhhhhcCCCcHHHHHHHh-ccCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHH
Confidence 6677766555545444433 3467899999987654 367889999988876531 3568777889999999999998
Q ss_pred hhcC---CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh
Q 015768 83 QENK---LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL 159 (400)
Q Consensus 83 ~~~~---~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l 159 (400)
+++| +++++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.++++ +|++.+++.+
T Consensus 100 ~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~--~d~~~l~~~l 176 (425)
T 1vp4_A 100 RMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVV-PLEDDG--MDLNVLERKL 176 (425)
T ss_dssp HHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEE-EEETTE--ECHHHHHHHH
T ss_pred hccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe-ccCCCC--CCHHHHHHHH
Confidence 8777 668899999999999999999999999999999999999999999999999999 877654 7999999988
Q ss_pred cc------CCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc----cCCCcEEEEe
Q 015768 160 ET------KPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEGDHVVNLF 228 (400)
Q Consensus 160 ~~------~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~~~~i~~~ 228 (400)
++ ...+++|+ +++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++..... ...+++++++
T Consensus 177 ~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~ 256 (425)
T 1vp4_A 177 SEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLN 256 (425)
T ss_dssp HHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEE
T ss_pred HhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEe
Confidence 75 11258874 6799999999999999999999999999999999999998875532211 1246789999
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhc
Q 015768 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALS 306 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~ 306 (400)
|+||++| +|+|+||++++ +++++.+.......+++.+.+.+.++..+|+.. .+++++.++.++++++.+.+.|+
T Consensus 257 s~sK~~~-~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 332 (425)
T 1vp4_A 257 TFSKVLA-PGLRIGMVAGS---KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALE 332 (425)
T ss_dssp ESTTTTC-GGGCEEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-cccceEEEeeC---HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 99999999998 788888887666556778999999999999864 35677888889999999999998
Q ss_pred cC-C---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHH
Q 015768 307 PL-G---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADR 378 (400)
Q Consensus 307 ~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~ 378 (400)
+. + ++.+..+.+++++|++++.. .+..+++.+|. ++||.+.||..|. .++++||+++..+++++++++++
T Consensus 333 ~~~~~~~g~~~~~~~~g~~~~~~~~~~-~~~~~l~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~ 410 (425)
T 1vp4_A 333 EYFSDIPGVKWVKSEGGLFIWLTLPEG-FDTWEMFEYAK-RKKVFYVPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKR 410 (425)
T ss_dssp HHSTTSTTCEECCCSBSSEEEEECCTT-CCTTTTHHHHH-HHTEECEEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHH
T ss_pred HhCCCCCceEEecCCccEEEEEEcCCC-CCHHHHHHHHH-HCCCEEECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHH
Confidence 74 3 45666677789999999753 25667888887 5599999998884 36799999987679999999999
Q ss_pred HHHHHHHHhcc
Q 015768 379 LRRGLEELVKD 389 (400)
Q Consensus 379 l~~~l~~~~~~ 389 (400)
|+++++++.++
T Consensus 411 l~~~l~~~~~~ 421 (425)
T 1vp4_A 411 LREVVLEYGKE 421 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999887654
No 34
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=7.6e-46 Score=355.37 Aligned_cols=349 Identities=17% Similarity=0.157 Sum_probs=299.6
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEEeCChHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMVTAGANQAFVN 104 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~~~g~t~a~~~ 104 (400)
.+++++|+|+.+.+++++++++++++.+.+.+.....|++..+.+++++++++++.+.+|+ ++++|++|+|+|++++.
T Consensus 41 ~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~ 120 (437)
T 3g0t_A 41 ATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFV 120 (437)
T ss_dssp HHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred hcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHH
Confidence 3578999999999999999999999999887543377888888899999999999988764 57899999999999999
Q ss_pred HHHHhc--CCCC--EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh-ccCCCCeEEEEeCCCCCCcc
Q 015768 105 IVLTLC--DAGD--SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGT 179 (400)
Q Consensus 105 ~~~~l~--~~gd--~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l-~~~~~~~~v~l~~p~nptG~ 179 (400)
++.++. ++|| +|+++.|+|+++...++..|++++.+ |.+++++.+|++.+++.+ ++++ ++|++++|+||||.
T Consensus 121 ~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~~--~~v~l~~p~nptG~ 197 (437)
T 3g0t_A 121 SFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESF-DLFEYRGEKLREKLESYLQTGQF--CSIIYSNPNNPTWQ 197 (437)
T ss_dssp HHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEE-EGGGGCTTHHHHHHHHHHTTTCC--CEEEEESSCTTTCC
T ss_pred HHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEE-eecCCCCccCHHHHHHHHhcCCc--eEEEEeCCCCCCCC
Confidence 999998 9999 99999999999999999999999999 887778888999999999 4544 99999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-c-------cc-c-CCCcEEEEeccccccCCCcceeEEEEccCC
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-H-------CC-V-EGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~-------~~-~-~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~ 249 (400)
+++.+++++|+++|++||+++|+|++|+.+.+++.. . .. . ..+++++++|+||.+|++|+|+||++.+
T Consensus 198 ~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-- 275 (437)
T 3g0t_A 198 CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMIS-- 275 (437)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC--
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEEC--
Confidence 999999999999999999999999999987775321 1 11 1 2678899999999999899999999998
Q ss_pred cHHHHH-H-----------------HHHhhccCCcCccHHHHHHHHHHhcCCcHH---HHHHHHHHHHHHHHHHHHhccC
Q 015768 250 VEGFAT-Q-----------------LLKVQDNIPICASIISQHLALYSLQTGPEW---VTERVKDLVRNREIIREALSPL 308 (400)
Q Consensus 250 ~~~~~~-~-----------------l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~l~~~L~~~ 308 (400)
+++++ . +.......+++++.+.+.++..+|+....+ ..++++++.++++.+.+.|+++
T Consensus 276 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (437)
T 3g0t_A 276 -GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN 354 (437)
T ss_dssp -HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 77777 6 665555557788999999999999863333 7888999999999999999998
Q ss_pred CCCccc-------CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCC--CeEEEEeccCCHHHHHHHHHHH
Q 015768 309 GEGAVK-------GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCR--GHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 309 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~--~~iRi~~~~~~~~~~~~~~~~l 379 (400)
+ +.+. ++.+++++|++++ ..+..++...|. ++||.+.|+..|+.. +++||+++..+++++++++++|
T Consensus 355 g-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l 430 (437)
T 3g0t_A 355 G-FNIVYDKDGNEPLADGFYFTVGYK--GMDSSKLIEKFV-RYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRL 430 (437)
T ss_dssp T-EEESSCEETTEECCSSSEEEEEET--TCCHHHHHHHHH-HTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHH
T ss_pred C-CEEeccccCCCCCceeEEEEEecC--CCCHHHHHHHHH-HcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence 4 3555 3367899999998 247888998886 679999999888643 7899999977899999999999
Q ss_pred HHHHHH
Q 015768 380 RRGLEE 385 (400)
Q Consensus 380 ~~~l~~ 385 (400)
++++++
T Consensus 431 ~~~~~~ 436 (437)
T 3g0t_A 431 QMLNAE 436 (437)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 988753
No 35
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=2.8e-45 Score=350.02 Aligned_cols=365 Identities=20% Similarity=0.265 Sum_probs=295.7
Q ss_pred HHHHhhhcCchHHHHHHHHHhc-CCCeEEcCCCCCCCCCcHH-HH--------------HHHHHhhcCCCCCCCCCCCCc
Q 015768 7 LAKRALETEMPIMVQIQELVRG-AKNAVSLAQGVVYWQPPKM-AM--------------EKVKELVWDPSISKYGADEGL 70 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~-v~--------------~a~~~~~~~~~~~~y~~~~g~ 70 (400)
+|+|+.....+.+.++.+.... ++++|+|+.|.++...+|. .+ ++..+ ...|++..|.
T Consensus 7 ~s~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~ 80 (425)
T 2r2n_A 7 ITAASAARNPSPIRTMTDILSRGPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKR------ALQYSPSAGI 80 (425)
T ss_dssp SCHHHHTCCCCSGGGHHHHHHHSCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHHH------HTSCCCTTCC
T ss_pred HHHHHhcCCCchHHHHHHHhhcCCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchhh------hcCCCCCCCC
Confidence 6888887666666666666554 3789999999987642221 00 11111 2458888999
Q ss_pred HHHHHHHHHHHHhhcCCCC---------CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEec
Q 015768 71 PELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVG 141 (400)
Q Consensus 71 ~~~~~~~a~~l~~~~~~~~---------~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~ 141 (400)
+++|+++++++.+.+|++. ++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|++++.+
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v- 159 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINV- 159 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEE-
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe-
Confidence 9999999999999888753 699999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCHHHHHHhhccC----------CCCeEEEE-eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 142 PCSSKTLHPDADWLEKTLETK----------PTPKLVSV-VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~~----------~~~~~v~l-~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
|.++++ +|++.|++.++.. ..+++|++ .+|+||||.+++.+++++|+++|++||+++|+||+|+.+.
T Consensus 160 ~~~~~~--~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~ 237 (425)
T 2r2n_A 160 ASDESG--IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQ 237 (425)
T ss_dssp CEETTE--ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGB
T ss_pred CcCCCC--CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCccccc
Confidence 887654 6999999988721 23588876 5899999999999999999999999999999999999888
Q ss_pred cCCCCc---cc-cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCC---
Q 015768 211 YDGRKH---CC-VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTG--- 283 (400)
Q Consensus 211 ~~~~~~---~~-~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--- 283 (400)
+++... .. ...+++++++|+||.++ +|+|+||++.+ +++++.+.......+++++.+.+.++..+|+..
T Consensus 238 ~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~ 313 (425)
T 2r2n_A 238 FNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP---KPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEE 313 (425)
T ss_dssp SSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE---HHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccc
Confidence 765322 11 22467899999999998 99999999999 788898888777677889999999999998751
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHhcc-CCCC-cccCCCCceEEEeeCCCCCCCHHH-HHHHHHHhcCeEEeCCCccCC--
Q 015768 284 --PEWVTERVKDLVRNREIIREALSP-LGEG-AVKGGEGAIYLWARLPEKHLDDFE-VVRWLAHRHGVVVIPGGACGC-- 356 (400)
Q Consensus 284 --~~~~~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gi~v~~g~~~~~-- 356 (400)
.++..++++.++++++.+.+.|++ +++. .+..|.+++|+|++++... +..+ +...+ .++||.+.||..|+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~l-~~~gv~v~pg~~f~~~~ 391 (425)
T 2r2n_A 314 GFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN-DVKELIEEKA-VKMGVLMLPGNAFYVDS 391 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS-CCHHHHHTHH-HHTTEECEEGGGGSSST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC-CHHHHHHHHH-HHCCcEEechhhhcCCC
Confidence 256777888889999999999987 4543 4566778999999998643 4455 45545 589999999998863
Q ss_pred ---CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 357 ---RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 357 ---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+++||+++..+++++++++++|++++++.
T Consensus 392 ~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 392 SAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp TSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 479999998559999999999999998764
No 36
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.1e-44 Score=345.07 Aligned_cols=355 Identities=21% Similarity=0.290 Sum_probs=292.9
Q ss_pred CCCeEEcCCCCC----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHh------hcC--CCCCcEEEeC
Q 015768 29 AKNAVSLAQGVV----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQ------ENK--LYKSSVMVTA 96 (400)
Q Consensus 29 ~~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~------~~~--~~~~~i~~~~ 96 (400)
.+++|+|+.|.+ .+++++.+++++.+.+.+.....|++..+..++++++++++.+ ..| +++++|++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~ 111 (416)
T 1bw0_A 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS 111 (416)
T ss_dssp CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence 367999999985 4678999999999998765456787777899999999999973 133 5688999999
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768 97 GANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGN 175 (400)
Q Consensus 97 g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~n 175 (400)
|+++++..++.++.++||+|+++.|+|+++...++..|++++.+ |.+++ ++.+|++.+++.+++++ +++++++|+|
T Consensus 112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~--~~v~i~~p~n 188 (416)
T 1bw0_A 112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFY-NCRPENDWEADLDEIRRLKDDKT--KLLIVTNPSN 188 (416)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTE--EEEEEESSCT
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEe-ecCcccCCCCCHHHHHHHhccCC--eEEEEeCCCC
Confidence 99999999999999999999999999999999999999999988 77644 56789999999997654 8999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC----Ccccc----CCCcEEEEeccccccCCCcceeEEEEcc
Q 015768 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR----KHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~----~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~~ 247 (400)
|||.++|.+++++|+++|++||+++|+||+|..+.+++. ..... ..+++++++|+||.++++|+|+||++++
T Consensus 189 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~ 268 (416)
T 1bw0_A 189 PCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYV 268 (416)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEE
T ss_pred CCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEee
Confidence 999999999999999999999999999999999877654 22111 1345788999999998899999999987
Q ss_pred CC---cHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768 248 SE---VEGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW 323 (400)
Q Consensus 248 ~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 323 (400)
+. .+.+...+.... ..+++++.+.+.++..+|+. ..+++++..++++++++++.+.|++++++.+..+.+++|+|
T Consensus 269 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 347 (416)
T 1bw0_A 269 DPHGNGPSFLEGLKRVG-MLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLM 347 (416)
T ss_dssp CTTCSCHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEE
T ss_pred CchhhHHHHHHHHHHHh-ccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEE
Confidence 41 112333333221 13567889999999999985 34678888999999999999999988665666677789999
Q ss_pred eeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 324 ARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 324 ~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++++.. ..+..+++.+|++++||.+.||..|+.++++||+++. +++++++++++|.+++++..+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~-~~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 348 SRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTR-PVEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp EEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCS-CHHHHHHHHHHHHHHHHHHBC
T ss_pred EeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence 888631 1357788888876899999999988888999999984 899999999999999987543
No 37
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=6.2e-45 Score=344.72 Aligned_cols=366 Identities=23% Similarity=0.358 Sum_probs=301.5
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCC--CCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHH
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYW--QPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+|+|+.....+.+.++.+.. .++++|+|+.|.++. .+++.+.+++.+.+.+.. ...|++..+..++++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~- 87 (397)
T 2zyj_A 10 FGKGAGRIQASTIRELLKLT-QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI- 87 (397)
T ss_dssp SCGGGGGCCCCHHHHHHHHH-TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH-
T ss_pred hhhhhcccCchHHHHHHhhc-cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh-
Confidence 66777666555555555543 357899999987554 367889999888876421 356877778999999999998
Q ss_pred hhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 83 ~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
|+++++|++|+|+++++..++.++.++||+|+++.|+|+++...++..|.+++.+ |.++++ +|++++++.+++.
T Consensus 88 ---g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~--~d~~~l~~~l~~~ 161 (397)
T 2zyj_A 88 ---GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTV-PAGEEG--PDLDALEEVLKRE 161 (397)
T ss_dssp ---TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEE-EEETTE--ECHHHHHHHHHHC
T ss_pred ---CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEec-CcCCCC--CCHHHHHHHHhhc
Confidence 6778999999999999999999999999999999999999999999999999998 876654 7999999999752
Q ss_pred CCCeEE-EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c-CC---CcEEEEecccccc
Q 015768 163 PTPKLV-SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V-EG---DHVVNLFSFSKAY 234 (400)
Q Consensus 163 ~~~~~v-~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~-~~---~~~i~~~s~sK~~ 234 (400)
. +++| ++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..... . .. +++++++|+||++
T Consensus 162 ~-~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 240 (397)
T 2zyj_A 162 R-PRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVL 240 (397)
T ss_dssp C-CSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTT
T ss_pred C-CeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccc
Confidence 2 4887 46799999999999999999999999999999999999998875532111 1 12 6779999999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhcc-CC-CC
Q 015768 235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSP-LG-EG 311 (400)
Q Consensus 235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~-~~-~~ 311 (400)
| +|+|+||++++ +++++.+.......+++.+.+.+.++..+|+... ++.++..+.++++++.+.+.|++ ++ ++
T Consensus 241 ~-~G~r~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~ 316 (397)
T 2zyj_A 241 S-PGLRVAFAVAH---PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEV 316 (397)
T ss_dssp C-GGGCCEEEECC---HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred c-ccceeEEEecC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCe
Confidence 9 99999999998 7888888776655566778999999999998743 56778888889999999999987 45 35
Q ss_pred cccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 312 AVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG----CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~----~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.+..+.+++++|++++.. .+..++..+|. ++||.+.+|..|. .++++||+++..+++++++++++|+++++++.
T Consensus 317 ~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 317 RYTRPKGGMFVWMELPKG-LSAEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp EECCCSBSSEEEEECSTT-CCHHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEccCCccEEEEEEcCCC-CCHHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 666677789999999753 36778888887 5699999998885 46899999997679999999999999998775
No 38
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=3.7e-44 Score=334.13 Aligned_cols=334 Identities=20% Similarity=0.246 Sum_probs=284.9
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
.+++++|+|+.+.+++++|+++++++.+.+.+ ...| +..+.+++++++++++ +++++++++|+|++++++.++
T Consensus 13 ~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~----~~~~~~i~~~~g~~~a~~~~~ 85 (354)
T 3ly1_A 13 PSTDNPIRINFNENPLGMSPKAQAAARDAVVK--ANRY-AKNEILMLGNKLAAHH----QVEAPSILLTAGSSEGIRAAI 85 (354)
T ss_dssp CCSSSCEECSSCCCSSCCCHHHHHHHHHTGGG--TTSC-CHHHHHHHHHHHHHHT----TSCGGGEEEESHHHHHHHHHH
T ss_pred CCCCceEEccCCCCCCCCCHHHHHHHHHHHhh--CcCC-CCCchHHHHHHHHHHh----CCChHHEEEeCChHHHHHHHH
Confidence 45688999999999999999999999998875 4566 4456677777777776 788899999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
.++.++||+|+++.|+|+++...++..|++++.+ |.+++ +.+|++.+++.++....+++|++++|+||||.++|.+++
T Consensus 86 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 163 (354)
T 3ly1_A 86 EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKV-KMLDN-WAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVI 163 (354)
T ss_dssp HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CCCTT-SCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHH
T ss_pred HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEe-cCCCC-CCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHH
Confidence 9999999999999999999999999999999999 88754 578999999999832224999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCccc----cCC-CcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC----VEG-DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ 261 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~----~~~-~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~ 261 (400)
.+|+++| +||+++|+|++|+.+.+++..... ... +++++++|+||.+|++|+|+||++.+ +++++.+....
T Consensus 164 ~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~ 239 (354)
T 3ly1_A 164 EPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH---PTVIALMGRYV 239 (354)
T ss_dssp HHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC---HHHHHHHGGGT
T ss_pred HHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC---HHHHHHHHHhc
Confidence 9999988 799999999999988876532221 123 78899999999999899999999998 88888888776
Q ss_pred ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768 262 DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLA 341 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (400)
. .++++.+.+.++..+|+. .+++.+++++++++++++.+.|++++. .+.++. ++|+|++++. +..++...|.
T Consensus 240 ~--~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~-~~~~~~~~~~---~~~~~~~~l~ 311 (354)
T 3ly1_A 240 A--GEKINFSGVDAALASMND-SAFITYSKKSNDVSRQILLKALEDLKL-PYLPSE-GNFVFHQLVV---PLKDYQTHMA 311 (354)
T ss_dssp T--CSCCCHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCC-SSEEEEECSS---CHHHHHHHHH
T ss_pred C--CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCCC-eECCCC-ceEEEEECCC---CHHHHHHHHH
Confidence 5 378899999999999986 477888999999999999999998853 555554 7789999975 5788888876
Q ss_pred HhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 342 HRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 342 ~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
++||.+. |..++.++++||+++ +++++++++++|++++++
T Consensus 312 -~~gi~v~-g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 312 -DAGVLIG-RAFPPADNWCRISLG--TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp -HTTEECC-CCCTTCTTEEEEECC--CHHHHHHHHHHHHHHHHT
T ss_pred -HCCEEEe-ecCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence 7899999 777777899999987 689999999999998864
No 39
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=4.8e-44 Score=335.04 Aligned_cols=332 Identities=20% Similarity=0.306 Sum_probs=286.2
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~~~~~~ 107 (400)
.+++|+|+.+.+++++|+++++++.+.+.+.....|+. .+..++++++++++ |+ +++++++|+|+|++++.++.
T Consensus 29 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~----g~~~~~~i~~~~g~t~a~~~~~~ 103 (367)
T 3euc_A 29 SHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM----QVPAGMEVLLGNGSDEIISMLAL 103 (367)
T ss_dssp CTTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH----TCCTTCEEEEEEHHHHHHHHHHH
T ss_pred CCCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh----CCCCcceEEEcCCHHHHHHHHHH
Confidence 36799999999999999999999999887433556744 57889999999987 66 67899999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
++.++||+|+++.|+|+++...++..|++++.+ |.++ ++.+|++.+++.+++ ++ ++|++++|+||||.+++.+++
T Consensus 104 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~~~~l 179 (367)
T 3euc_A 104 AAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGV-PLRA-DFTLDRGAMLAAMAEHQP--AIVYLAYPNNPTGNLFDAADM 179 (367)
T ss_dssp HTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEE-ECCT-TSCCCHHHHHHHHHHHCC--SEEEEESSCTTTCCCCCHHHH
T ss_pred HHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEe-cCCC-CCCCCHHHHHHHhhccCC--CEEEEcCCCCCCCCCCCHHHH
Confidence 999999999999999999999999999999999 8876 457899999999986 55 999999999999999999999
Q ss_pred HHHHHHHHHc--CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768 187 KRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264 (400)
Q Consensus 187 ~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~ 264 (400)
++|+++|++| |+++|+|++|+.+...+........+.+++++|+||. +++|+|+||++.+ +++++.+.....
T Consensus 180 ~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~---~~~~~~~~~~~~-- 253 (367)
T 3euc_A 180 EAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD---PQWLEQLDKVRP-- 253 (367)
T ss_dssp HHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC---HHHHHHHGGGCC--
T ss_pred HHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeC---HHHHHHHHHhCC--
Confidence 9999999999 9999999999987654332233346788999999999 8899999999998 788888876654
Q ss_pred CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
+++.+.+.+.++..+|+. .+++.+..+++.++++++.+.|++++++.+.++ .++++|++++ +..++...| .++
T Consensus 254 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~-~~~~~~~~~~----~~~~l~~~l-~~~ 326 (367)
T 3euc_A 254 PYNVNVLTEATALFALEH-VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPS-AANFLLARVP----DAAQTFDRL-LAR 326 (367)
T ss_dssp SSCCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECCC-SSSEEEEECS----CHHHHHHHH-HTT
T ss_pred CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCC-CCeEEEEECC----CHHHHHHHH-HHC
Confidence 667899999999999987 677889999999999999999999866565544 4888999987 577888877 589
Q ss_pred CeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 345 gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
||.+.+|..|. .++++|++++ +++++++++++|+++++
T Consensus 327 gi~v~~~~~~~~~~~~~iRis~~--~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 327 KVLIKNVSKMHPLLANCLRVTVS--TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp TEECEECGGGCGGGTTEEEEECC--CHHHHHHHHHHHHHHTC
T ss_pred CeEEEECCccCCCCCCEEEEecC--CHHHHHHHHHHHHHHhc
Confidence 99999998875 4689999987 69999999999988753
No 40
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.8e-44 Score=335.50 Aligned_cols=330 Identities=19% Similarity=0.256 Sum_probs=284.2
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
+.+++|+|+.+.+++++++.+++++.+.+.. ...|+...+ .++++++++++ |+++++|++|+|++++++.++.
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~----~~~~~~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 28 GVKEVIKLASNENPFGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY----KVQNENIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp TCSCCEECSSCCCTTCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH----TCCGGGEEEESSHHHHHHHHHH
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh----CCCcceEEECCCHHHHHHHHHH
Confidence 4588999999999999999999999998874 556765555 88999999887 7788999999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
++.++||+|+++.|+|+++...++..|++++.+ |.+++++ +|++++++.+++++ ++|++++|+||||.++|.+++.
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~-~d~~~l~~~l~~~~--~~v~~~~p~nptG~~~~~~~l~ 176 (365)
T 3get_A 101 SKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKT-QSITHNL-DEFKKLYETHKDEI--KLIFLCLPNNPLGECLDASEAT 176 (365)
T ss_dssp HHCCTTCEEEECSSCCTHHHHHHHHHTCEEEEC-SSSSCCH-HHHHHHHHHTTTTE--EEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEE-ecCCCCC-CCHHHHHHHhCCCC--CEEEEcCCCCCCCCCcCHHHHH
Confidence 999999999999999999999999999999999 8744556 89999999998554 9999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEccccccccc--CCCC-ccc----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMY--DGRK-HCC----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~--~~~~-~~~----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
+|+++| ++|+++|+|++|+.+.+ .+.. ... ...+++++++|+||.+|++|+|+||++.+ +++++.+...
T Consensus 177 ~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~~~~~ 252 (365)
T 3get_A 177 EFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN---ANIISAFYKL 252 (365)
T ss_dssp HHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC---HHHHHHHHHH
T ss_pred HHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC---HHHHHHHHHh
Confidence 999888 57999999999998874 3221 111 13578899999999999899999999997 8899988876
Q ss_pred hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHH
Q 015768 261 QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWL 340 (400)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 340 (400)
.. +++++.+.+.++..+|+. .+++++.+++++++++++.+.|++++ +.+.++. +.|+|++++.. +..++...|
T Consensus 253 ~~--~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~-~~~~~~~~~~~--~~~~~~~~l 325 (365)
T 3get_A 253 RA--PFNVSNLALKAAVAAMDD-DEFTEKTLENNFSQMELYKEFAKKHN-IKIIDSY-TNFITYFFDEK--NSTDLSEKL 325 (365)
T ss_dssp SC--TTCSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCCS-SSEEEEECSSS--CHHHHHHHH
T ss_pred cC--CCCcCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCCC-CeEEEEECCCC--CHHHHHHHH
Confidence 65 467899999999999986 47788999999999999999999884 4666555 67789999864 678888888
Q ss_pred HHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 341 AHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 341 ~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
. ++||.+.+|..|+ ++++|++++ ++++++++++.|++++
T Consensus 326 ~-~~gi~v~~g~~~~-~~~iRis~~--~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 326 L-KKGIIIRNLKSYG-LNAIRITIG--TSYENEKFFTEFDKIL 364 (365)
T ss_dssp H-TTTEECEECGGGT-CSEEEEECC--CHHHHHHHHHHHHHHH
T ss_pred H-HCCEEEEECccCC-CCEEEEEcC--CHHHHHHHHHHHHHHh
Confidence 6 6899999999888 899999998 6899999999998875
No 41
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=1e-43 Score=332.34 Aligned_cols=329 Identities=19% Similarity=0.256 Sum_probs=282.4
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
+.+++|+|+.+.+++++++++++++.+.+.. ...| +..+..++++++++++ +++++++++|+|++++++.++.
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~----~~~~~~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 30 GLTKITKLSSNENPLGTSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFY----QLEEEELIFTAGVDELIELLTR 102 (363)
T ss_dssp TCSCCEECSSCSCTTCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH----TCCGGGEEEESSHHHHHHHHHH
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHh----CCChhhEEEeCCHHHHHHHHHH
Confidence 4578999999999999999999999987754 4456 4567889999999988 6788999999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
++.++||+|+++.|+|+++...++..|++++.+ |.+++ +.+|++.+++.+++++ ++|++++|+||||.++|.+++.
T Consensus 103 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~p~nptG~~~~~~~l~ 178 (363)
T 3ffh_A 103 VLLDTTTNTVMATPTFVQYRQNALIEGAEVREI-PLLQD-GEHDLEGMLNAIDEKT--TIVWICNPNNPTGNYIELADIQ 178 (363)
T ss_dssp HHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEE-ECCTT-SCCCHHHHHHHCCTTE--EEEEEESSCTTTCCCCCHHHHH
T ss_pred HHccCCCEEEEcCCChHHHHHHHHHcCCEEEEe-cCCCC-CCcCHHHHHHhcccCC--CEEEEeCCCCCcCCCcCHHHHH
Confidence 999999999999999999999999999999999 88753 5789999999998655 9999999999999999988888
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCCc----cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKH----CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~----~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
+|++.|++ |+++|+|++|+.+.+ +... .....+++++++|+||.+|++|+|+||++.+ +++++.+.....
T Consensus 179 ~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~- 252 (363)
T 3ffh_A 179 AFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD---KEIIRQLNIVRP- 252 (363)
T ss_dssp HHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC---HHHHHHHHHTCC-
T ss_pred HHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC---HHHHHHHHHhCC-
Confidence 88887776 999999999998876 3211 1223678899999999999899999999997 899998887765
Q ss_pred CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768 264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (400)
+++++.+.+.++..+|+. .+++++..++++++++++.+.|+++.++.+.++. ++|+|++++. +..++...|. +
T Consensus 253 -~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~-~~~~~~~~~~---~~~~~~~~l~-~ 325 (363)
T 3ffh_A 253 -PFNTTSIGQKLAIEAIKD-QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPAN-GNFVLIDLGI---EAGTIFSYLE-K 325 (363)
T ss_dssp -SCCCBHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCC-SSEEEEECSS---CHHHHHHHHH-H
T ss_pred -CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCC-CeEEEEECCC---CHHHHHHHHH-H
Confidence 678999999999999985 4778889999999999999999985455666555 7788999974 6788888886 7
Q ss_pred cCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 344 HGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 344 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
+||.+.+|..|+.++++|++++ +++++++++++|+++
T Consensus 326 ~gi~v~~g~~~~~~~~iRis~~--~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 326 NGYITRSGAALGFPTAVRITIG--KEEDNSAVIALLEKL 362 (363)
T ss_dssp TTEECEETTTTTCTTEEEEECC--CHHHHHHHHHHHHHH
T ss_pred CCeEEEeCccCCCCCeEEEECC--CHHHHHHHHHHHHHh
Confidence 8999999999988999999998 699999999999875
No 42
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=6.8e-45 Score=348.00 Aligned_cols=346 Identities=17% Similarity=0.233 Sum_probs=289.7
Q ss_pred CCCeEEcCCCCC-CCCCcHHH--HHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc-CCCCCc---EEEeCChHHH
Q 015768 29 AKNAVSLAQGVV-YWQPPKMA--MEKVKELVWDPSISKYGADEGLPELRDALVKKLNQEN-KLYKSS---VMVTAGANQA 101 (400)
Q Consensus 29 ~~~~i~~~~~~~-~~~~~~~v--~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~-~~~~~~---i~~~~g~t~a 101 (400)
.+++++|+.|.+ +++.++.+ ++++.+.+.......|++..|..++++++++++.+.+ ++++++ |++|+|+++|
T Consensus 46 ~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~a 125 (430)
T 2x5f_A 46 KSTTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHG 125 (430)
T ss_dssp TTCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHH
T ss_pred CCCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHH
Confidence 467999999999 88777766 7776666543235678777789999999999997775 556788 9999999999
Q ss_pred HHHHHHHhcCCCCEEEEeCCCccchhHHHHh-cCcEEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCCCCCcc
Q 015768 102 FVNIVLTLCDAGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPGNPSGT 179 (400)
Q Consensus 102 ~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~ 179 (400)
++.++.++.++||+|+++.|+|+++...++. .|++++.+ |.+++++.+|++.+++.+++. ..++++++++|+||||.
T Consensus 126 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~ 204 (430)
T 2x5f_A 126 LSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTY-PIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGY 204 (430)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEE-CCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCC
T ss_pred HHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEE-eccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCC
Confidence 9999999999999999999999999999999 99999999 887633568999999998751 12489999999999999
Q ss_pred CCCHHHHHHHHHHHHH-----cCCEEEEcccccccccCCCCcc----cc-C-CCc---EEEEeccccccCCCcceeEEEE
Q 015768 180 YIPERLLKRISDLCKA-----AGSWLVVDNTYEYFMYDGRKHC----CV-E-GDH---VVNLFSFSKAYGMMGWRVGYIA 245 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~-----~~~~li~D~a~~~~~~~~~~~~----~~-~-~~~---~i~~~s~sK~~g~~g~~~G~i~ 245 (400)
+++.+++++|+++|++ ||+++|+||+|+.+.+++.+.. .. . .++ +++++|+||.+|++|+|+||++
T Consensus 205 ~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~ 284 (430)
T 2x5f_A 205 TPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMT 284 (430)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEE
T ss_pred cCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEE
Confidence 9999999999999999 9999999999999887654211 11 2 567 8999999999988999999999
Q ss_pred c---cCCcHHHHHHHHHhhcc----CCcCccHHHHHHHHHHhc-CCcHHHHH---HHHHHHHHHHHHHHHhc----cCCC
Q 015768 246 Y---PSEVEGFATQLLKVQDN----IPICASIISQHLALYSLQ-TGPEWVTE---RVKDLVRNREIIREALS----PLGE 310 (400)
Q Consensus 246 ~---~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~l~-~~~~~~~~---~~~~~~~~~~~l~~~L~----~~~~ 310 (400)
. + +++++.+...... .+++++.+.+.++..+|+ .. ++.++ ..+.++++++.+.+.|+ +.+
T Consensus 285 ~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g- 359 (430)
T 2x5f_A 285 FGTSD---QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNK-QFDKEIEQNIQTLKERYEVTKEVVYADQYHSH- 359 (430)
T ss_dssp EBCCC---HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-
T ss_pred EecCC---HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-
Confidence 8 6 7888888766544 567889999999999998 63 44445 88889999999999998 454
Q ss_pred CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+.+..+.+++|+|++++ . .+..+++.+|.+++||.+.|| .++++||+++..+++++++++++|+++++++
T Consensus 360 ~~~~~~~~g~~~~~~~~-~-~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 360 WQAYDFNSGYFMAIKVH-D-VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp EEECCCCBSSEEEEEES-S-SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHHHHHHHH
T ss_pred ceeeCCCceEEEEeCCC-C-CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 46677777899999997 2 467889998875599999997 4689999999558999999999999998765
No 43
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=3.6e-44 Score=344.94 Aligned_cols=342 Identities=22% Similarity=0.351 Sum_probs=283.2
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
++++|+|+.|+++++.++.+++++.+.+.+ .....|++..+.+++++++++++..-.++++++|++|+|+++++..
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~ 147 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIAR 147 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHH
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHH
Confidence 678999999999999999999999988873 3355787778999999999999871114568899999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcE----------EEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT----------HILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~----------~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
+ .++.++||+|+++.|+|+++...++..|.+ ++.+ |.+++ ++..+++.+ ++ +++|++++|
T Consensus 148 ~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~--~~~v~l~~p 218 (449)
T 3qgu_A 148 I-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYM-VCNPDNHFFPDLSKA-----KR--TDIIFFCSP 218 (449)
T ss_dssp H-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEE-ECCGGGTTCCCGGGC-----CC--CSEEEEESS
T ss_pred H-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEE-ecccccCCcCChhHc-----CC--CCEEEEeCC
Confidence 8 888899999999999999999999999988 8888 87755 455554321 23 599999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---c--CCCcEEEEeccccccCCCcceeEEEEccC
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..... . ..++++++.|+||.+|++|+|+||++.++
T Consensus 219 ~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 298 (449)
T 3qgu_A 219 NNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPK 298 (449)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCT
T ss_pred CCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCH
Confidence 999999999999999999999999999999999998876532211 1 14678999999999999999999999984
Q ss_pred CcHHHHH--------HHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768 249 EVEGFAT--------QLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319 (400)
Q Consensus 249 ~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 319 (400)
++++ .+.........+++.+.+.++..+++. +.++.+++.++++++++++.+.|++++. .+..+.++
T Consensus 299 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~ 374 (449)
T 3qgu_A 299 ---ALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGF-SVYGGDDA 374 (449)
T ss_dssp ---TCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEESSSS
T ss_pred ---HHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCC-eeeCCCCe
Confidence 3332 344444444567899999999999885 3467788899999999999999999854 67777779
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+++|+.++ ..+..+++.+|++++||.+.||..|+ .++++||++.. +++++++++++|++++++-
T Consensus 375 ~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 375 PYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAFG-SRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp SEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHC--
T ss_pred eEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEecC-CHHHHHHHHHHHHHHHHhc
Confidence 99999998 34788899888877799999999886 36899999876 9999999999999887653
No 44
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=5.4e-44 Score=341.99 Aligned_cols=344 Identities=23% Similarity=0.355 Sum_probs=280.5
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcC----CCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWD----PSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
+++++|+|+.++++++.|+.+++++.+.+.+ .....|++..+..++++++++++.+.+++++++|++|+|+++++.
T Consensus 54 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~ 133 (432)
T 3ei9_A 54 PDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDIS 133 (432)
T ss_dssp TTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHH
T ss_pred CCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHH
Confidence 3568999999999999999999999988863 224568777899999999999998666778899999999999999
Q ss_pred HHHHHhcCCCCEEEEeCCCccchhHHHHhcCc------------EEEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEE
Q 015768 104 NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSV 170 (400)
Q Consensus 104 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l 170 (400)
.+ ..+.++||+|+++.|+|+++...++..|. +++.+ |.+++ ++..+++. .++ +++|++
T Consensus 134 ~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~-----~~~--~~~v~l 204 (432)
T 3ei9_A 134 RL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYM-RCTPENGFFPDLST-----VGR--TDIIFF 204 (432)
T ss_dssp HH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEE-ECCGGGTTSCCGGG-----CCC--CSEEEE
T ss_pred HH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEe-ccCcccCCcCChhh-----CCC--CCEEEE
Confidence 74 77788999999999999999998888773 56777 76643 34445332 123 599999
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc----CCCcEEEEeccccccCCCcceeEEEEc
Q 015768 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV----EGDHVVNLFSFSKAYGMMGWRVGYIAY 246 (400)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~g~~g~~~G~i~~ 246 (400)
++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.+.... ..+++++++|+||.+|++|+|+||+++
T Consensus 205 ~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~ 284 (432)
T 3ei9_A 205 CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVI 284 (432)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEEC
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEE
Confidence 9999999999999999999999999999999999999987764332211 236789999999999999999999999
Q ss_pred cCCc-----HHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768 247 PSEV-----EGFATQLLKVQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 320 (400)
Q Consensus 247 ~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 320 (400)
++.. ..+.+.+.........+++.+.+.++..++.. +.++++++++.++++++.+.+.|++++ +.+..+.+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 363 (432)
T 3ei9_A 285 PKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLG-YDVYGGKNAP 363 (432)
T ss_dssp CTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEECSSSS
T ss_pred ChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCC-ceecCCCcce
Confidence 8421 00256666655545667889999998888863 346788889999999999999999885 4666666789
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
|+|+.++. .+..+++.++++++||.+.||..|+ +++++||++.. +++++++++++|++--+
T Consensus 364 ~~~~~~~~--~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~-~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 364 YVWVHFPN--QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFG-HRENILEACRRFKQLYK 426 (432)
T ss_dssp EEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS-CHHHHHHHHHHHHHHHT
T ss_pred EEEEECCC--CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecC-CHHHHHHHHHHHHHHhh
Confidence 99999983 3678888888877899999999886 37899999975 99999999999987544
No 45
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=4.2e-44 Score=337.55 Aligned_cols=357 Identities=15% Similarity=0.172 Sum_probs=282.1
Q ss_pred HHhhhcCchHHHHHHHHHhc--CCCeEEcCCCCC---C--CCCcHHHHHHHHHhh-cCCCCCCCCCCCCcHHHHHHHHHH
Q 015768 9 KRALETEMPIMVQIQELVRG--AKNAVSLAQGVV---Y--WQPPKMAMEKVKELV-WDPSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~---~--~~~~~~v~~a~~~~~-~~~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
.++.....+...++.+.++. .++.|+|+.|.+ + +.+++.+.++.. .. ..+....|++..|.+++|++++++
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~ 84 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNL 84 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHH
T ss_pred hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHH
Confidence 46666666666777776654 367999999962 2 345677777766 43 333467899999999999999999
Q ss_pred HHhhcCC--CCCc--EEEeCChHHHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCHH
Q 015768 81 LNQENKL--YKSS--VMVTAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDAD 153 (400)
Q Consensus 81 l~~~~~~--~~~~--i~~~~g~t~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~e 153 (400)
+.+.++. ++++ +++|+|+++|+..++.++.+ | |+|++++|+|+++...++..|++++.+ |. +++++.+|++
T Consensus 85 ~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~ 162 (405)
T 3k7y_A 85 IFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYI-NFFDYNLIDINYD 162 (405)
T ss_dssp HHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEE-CCEETTTTEECHH
T ss_pred HcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEE-eccccccCCcCHH
Confidence 9776653 3554 69999999999999999987 8 999999999999999999999999999 88 4556788999
Q ss_pred HHHHhhccCCCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-----cc--ccCCCcEE
Q 015768 154 WLEKTLETKPTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-----HC--CVEGDHVV 225 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~--~~~~~~~i 225 (400)
.+++.++..+..+++++++| |||||.+++.+++++|+++|++||+++|+||+|.++.+++.. .. ....++++
T Consensus 163 ~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i 242 (405)
T 3k7y_A 163 LFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFS 242 (405)
T ss_dssp HHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEE
T ss_pred HHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEE
Confidence 99999874332478888755 899999999999999999999999999999999999875321 11 12346899
Q ss_pred EEeccccccCCCcceeEEEEc--cCCcHHHHHHHH----HhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHH
Q 015768 226 NLFSFSKAYGMMGWRVGYIAY--PSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTG------PEWVTERVKD 293 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~G~i~~--~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~ 293 (400)
+++||||.||++|+|+||++. ++ +++++++. ........+++.+.+.++..+|+.. .+++.+++++
T Consensus 243 ~~~S~SK~~~l~GlRiG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~ 320 (405)
T 3k7y_A 243 VCQSFSKNMSLYGERAGALHIVCKN--QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQR 320 (405)
T ss_dssp EEEECTTTSCCTTTTEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEeeCCccCCCccccceEEEEEeCC--HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999864 33 66655543 2222233456788888888888763 1335566778
Q ss_pred HHHHHHHHHHHhc----cCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768 294 LVRNREIIREALS----PLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366 (400)
Q Consensus 294 ~~~~~~~l~~~L~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~ 366 (400)
++++++.+.+.|+ +++. +.+..+++|+|+|+.++. +++.+| +++||.+.||. |||++.
T Consensus 321 ~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~------~~~~~L-~~~gV~v~p~~--------Ris~a~ 385 (405)
T 3k7y_A 321 ITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA------KIAEHL-KTHHIYIINNG--------RINVSG 385 (405)
T ss_dssp HHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG------GGTTTT-TTTTEECCTTS--------EEEGGG
T ss_pred HHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH------HHHHHH-HHCCEeecCCC--------eEEEec
Confidence 9999999999999 7753 467788999999998863 345567 79999999964 999987
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 015768 367 LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 367 ~~~~~~~~~~~~l~~~l~~ 385 (400)
.++++++.++++|+++++.
T Consensus 386 ~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 386 ITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp CCTTHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHHHhh
Confidence 7899999999999999864
No 46
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=1.3e-43 Score=333.06 Aligned_cols=326 Identities=19% Similarity=0.286 Sum_probs=280.3
Q ss_pred HHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH
Q 015768 51 KVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF 130 (400)
Q Consensus 51 a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~ 130 (400)
++.+.+.+. ...|++..|..++++++++++. +++++++++|+|+++|+..++.++.++||+|+++.|+|+++...+
T Consensus 47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~---~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~~~ 122 (375)
T 3op7_A 47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT---GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIP 122 (375)
T ss_dssp HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS---SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHHHH
T ss_pred HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc---cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHH
Confidence 455555554 4668888899999999999873 567899999999999999999999999999999999999999999
Q ss_pred HhcCcEEEEeccCC-CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 131 QMTGVTHILVGPCS-SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 131 ~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
+..|++++.+ |.+ ++++.+|++.+++.+++++ ++|++++|+||||.++|.+++++|.++|++||+++|+||+|+.+
T Consensus 123 ~~~g~~~~~v-~~~~~~~~~~d~~~l~~~l~~~~--~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~ 199 (375)
T 3op7_A 123 KSLGAEVDLW-QIEEENGWLPDLEKLRQLIRPTT--KMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSF 199 (375)
T ss_dssp HHTTCEEEEE-EEEGGGTTEECHHHHHHHCCTTC--CEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCC
T ss_pred HHcCCEEEEE-eccccCCCCCCHHHHHHhhccCC--eEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence 9999999998 776 4567789999999998655 99999999999999999999999999999999999999999988
Q ss_pred ccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHH
Q 015768 210 MYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTE 289 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 289 (400)
.+++........+++++++|+||.+|++|+|+||++++ +++++.+.......+++++.+.+.++..+++..+++.++
T Consensus 200 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 276 (375)
T 3op7_A 200 SELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAAN---HQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILER 276 (375)
T ss_dssp SSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECC---HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred cccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeC---HHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHH
Confidence 76532222223577899999999998899999999997 899999988887778888999999999888865566778
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCH
Q 015768 290 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVE 369 (400)
Q Consensus 290 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~ 369 (400)
.++.++++++.+.+.|++.+.+.+..+.++++.|+.++.. .+..+++.++++++||.+.||..|+.++++|++++. +.
T Consensus 277 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~-~~ 354 (375)
T 3op7_A 277 NRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD-MPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC-EQ 354 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS-SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS-CH
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC-CCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC-CH
Confidence 8888899999999999988776777777788888887654 367888888877899999999999889999999997 67
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 015768 370 DDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 370 ~~~~~~~~~l~~~l~~~~~ 388 (400)
+++++++++|.++++++.+
T Consensus 355 ~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 355 ETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp HHHHHHHHHHHHHHGGGC-
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999987654
No 47
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.4e-43 Score=344.17 Aligned_cols=342 Identities=23% Similarity=0.314 Sum_probs=280.6
Q ss_pred CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHHHhc-CCCCEEE
Q 015768 44 PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVLTLC-DAGDSVV 117 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~~l~-~~gd~vl 117 (400)
.|+++++++.+.+.+. ....|++..|..++++++++++.+.+| +++++|++|+|+++++..++.++. ++||+|+
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vl 186 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGIL 186 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEE
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEE
Confidence 4567788777777663 467899999999999999999988876 568999999999999999999998 8999999
Q ss_pred EeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768 118 MFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (400)
Q Consensus 118 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~i~~l 192 (400)
++.|+|+++...++..|++++.+ +.+++ +|.+|++.|++.+++. ..+++|++++|+||||.+++.+++++|+++
T Consensus 187 v~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~l 265 (500)
T 3tcm_A 187 VPIPQYPLYSASIALHGGALVPY-YLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKF 265 (500)
T ss_dssp EEESCCTHHHHHHHHTTCEEEEE-ECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EeCCCcHhHHHHHHHcCCEEEEE-ecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHH
Confidence 99999999999999999999999 87765 5788999999999741 125899999999999999999999999999
Q ss_pred HHHcCCEEEEcccccccccCCC-Cccc-----------cCCCcEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHH
Q 015768 193 CKAAGSWLVVDNTYEYFMYDGR-KHCC-----------VEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 193 ~~~~~~~li~D~a~~~~~~~~~-~~~~-----------~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
|++||+++|+||+|..+.+++. +... .....+++++|+||.+ |++|+|+||++..+..+++++.+..
T Consensus 266 a~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~ 345 (500)
T 3tcm_A 266 CKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYK 345 (500)
T ss_dssp HHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHH
T ss_pred HHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHH
Confidence 9999999999999999888542 2211 1223578899999999 8899999999872111678888877
Q ss_pred hhccCCcCccHHHHHHHHHHhcCC----------cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768 260 VQDNIPICASIISQHLALYSLQTG----------PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 329 (400)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 329 (400)
... ...+++.+.+.++..+++.. .++..+++++++++++.+.+.|++++++.+..+++++|+|+++...
T Consensus 346 ~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp 424 (500)
T 3tcm_A 346 IAS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLP 424 (500)
T ss_dssp HHH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCC
T ss_pred HHh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCc
Confidence 653 45678899999998888731 1445677788899999999999998777888889899999655321
Q ss_pred ----------CCC-HHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 330 ----------HLD-DFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 330 ----------~~~-~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
... ...++..+++++||.+.||..|+. .+++|++++ .+++++++++++|+++++++.+
T Consensus 425 ~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~-~~~e~i~~~i~~l~~~~~~~~~ 496 (500)
T 3tcm_A 425 QKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL-PQEDKIPAVISRFTVFHEAFMS 496 (500)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC-SCTTTHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 011 233455677789999999999873 458999999 6999999999999999998765
No 48
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2e-44 Score=343.85 Aligned_cols=366 Identities=16% Similarity=0.128 Sum_probs=287.4
Q ss_pred HHHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCC---CCCcHHHHHHHHHhhc--CC-CCCCCCCCCCcHHHHHHHHHH
Q 015768 7 LAKRALETEMPIMVQIQELVRGAKNAVSLAQGVVY---WQPPKMAMEKVKELVW--DP-SISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~v~~a~~~~~~--~~-~~~~y~~~~g~~~~~~~~a~~ 80 (400)
.++++.......+.++.++.+. .+.|+|+.|.++ +++++.+++++.+.+. .+ ....|++..|.+++|++++++
T Consensus 10 ~~~~l~~~~~~~~~~~~~l~~~-~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~ 88 (422)
T 3d6k_A 10 DAARLAQVREEVTAKYAELKAK-NLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEA 88 (422)
T ss_dssp --------CHHHHHHHHHHHHT-TCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHH
T ss_pred CHHHHHhhHHHHHHHHHHHhcc-CCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHH
Confidence 4555555556666666666554 458999999998 7777788887766531 22 256798888999999999999
Q ss_pred HHhhcCCCCCcEEEeCChHHHH--HHHHHHhcCC------------CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCC
Q 015768 81 LNQENKLYKSSVMVTAGANQAF--VNIVLTLCDA------------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK 146 (400)
Q Consensus 81 l~~~~~~~~~~i~~~~g~t~a~--~~~~~~l~~~------------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 146 (400)
+ ++++++|++|+|+++++ ..++.++..+ +|+|+++.|+|+++...++..|++++.+ |.+++
T Consensus 89 ~----~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~ 163 (422)
T 3d6k_A 89 L----GLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINV-PMTDE 163 (422)
T ss_dssp H----TCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEE-EEETT
T ss_pred h----CCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEec-CCCCC
Confidence 8 78889999999999997 6777777665 3479999999999999999999999999 88766
Q ss_pred CCCCCHHHHHHhhccCCCCeEEE-EeCCCCCCccCCCHHHHHHHHHHHH-HcCCEEEEcccccc--cccCCCCccc----
Q 015768 147 TLHPDADWLEKTLETKPTPKLVS-VVNPGNPSGTYIPERLLKRISDLCK-AAGSWLVVDNTYEY--FMYDGRKHCC---- 218 (400)
Q Consensus 147 ~~~~~~e~l~~~l~~~~~~~~v~-l~~p~nptG~~~~~~~l~~i~~l~~-~~~~~li~D~a~~~--~~~~~~~~~~---- 218 (400)
| +|++.+++.+++.. +++|+ +++|+||||.+++.+++++|+++|+ +||+++|+||+|.. +..++.+...
T Consensus 164 g--~d~~~l~~~l~~~~-~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 240 (422)
T 3d6k_A 164 G--PDMGVVRELVKDPQ-VKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEF 240 (422)
T ss_dssp E--ECHHHHHHHHTSTT-EEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHH
T ss_pred C--CCHHHHHHHHhcCC-CeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhH
Confidence 4 79999999987522 58888 5789999999999999999999999 99999999999985 4333322211
Q ss_pred ----cCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-C--cHHHHHHH
Q 015768 219 ----VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G--PEWVTERV 291 (400)
Q Consensus 219 ----~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~ 291 (400)
...+++++++|+||. +++|+|+||++.+ +++++.+.......+++++.+.+.++..+|+. + .+++++.+
T Consensus 241 ~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~---~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~ 316 (422)
T 3d6k_A 241 AQAAGNPNRFWFMSSTSKI-THAGSGVSFFASS---KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHA 316 (422)
T ss_dssp HHHTTCTTCEEEEEESTTT-SCTTSSCEEEECC---HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred hhccCCCCcEEEEcChhhh-cCcccceEEEEeC---HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 135789999999999 5699999999998 88999888877666778899999999999986 2 25667777
Q ss_pred HHHHHHHHHHHHHhcc----CCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC-CCccC-----CCCeEE
Q 015768 292 KDLVRNREIIREALSP----LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG-----CRGHLR 361 (400)
Q Consensus 292 ~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iR 361 (400)
+.++++++.+.+.|++ ++.+.+..|.+++|+|++++.. +.+.+...+ .++||.+.| |..|. .++++|
T Consensus 317 ~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l-~~~gV~v~~~g~~f~~~~~~~~~~iR 393 (422)
T 3d6k_A 317 ASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPG--TASRVVELA-KEAGIALTGAGSSFPLHNDPNNENIR 393 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTT--CHHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCC--CHHHHHHHH-HHCCeEEEcCccccCCCCCCCCCeEE
Confidence 7788888877777754 4444556777799999999753 456666644 689999999 45453 368999
Q ss_pred EEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 362 ISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 362 i~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
|+++..+++++++++++|+++++++..
T Consensus 394 is~~~~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 394 LAPSLPPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp ECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 999865899999999999999987644
No 49
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=2.5e-43 Score=337.02 Aligned_cols=363 Identities=21% Similarity=0.315 Sum_probs=290.0
Q ss_pred chHHHHHHHHHhc-----C--CCeEEcCCCCCCCCCcHHHHHHHHHhhcC----------CCCCCCCCCCCcHHHHHHHH
Q 015768 16 MPIMVQIQELVRG-----A--KNAVSLAQGVVYWQPPKMAMEKVKELVWD----------PSISKYGADEGLPELRDALV 78 (400)
Q Consensus 16 ~~~~~~~~~~~~~-----~--~~~i~~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~~~~~~a 78 (400)
.+++.++..+... + .++|+|+.+.+++++ +.+.+++.+.... .....|++..|..+++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la 93 (428)
T 1iay_A 15 SPYFDGWKAYDSDPFHPLKNPNGVIQMGLAENQLCL-DLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIA 93 (428)
T ss_dssp CCTTHHHHHHHHSBCCSSSSTTSBEECSSCCCCSSH-HHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHH
T ss_pred ccccchhhhhccCCCCcccCCCceeeeccccchhhH-HHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHH
Confidence 4556666555432 1 468999988887764 5778887754310 01356877778999999999
Q ss_pred HHHHhhcC----CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEeccCCC-CCCCCCH
Q 015768 79 KKLNQENK----LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSS-KTLHPDA 152 (400)
Q Consensus 79 ~~l~~~~~----~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~ 152 (400)
+++.+.+| +++++|++++|+++++..++.+++++||+|+++.|+|+++...+. ..|++++.+ |.++ +++.+|+
T Consensus 94 ~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~ 172 (428)
T 1iay_A 94 KFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPI-HCESSNNFKITS 172 (428)
T ss_dssp HHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEE-CCCTTTTTCCCH
T ss_pred HHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEe-ecCCccCCcCCH
Confidence 99988877 568999999999999999999999999999999999999887554 679999999 8765 4667899
Q ss_pred HHHHHhhcc----CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc---cc--C---
Q 015768 153 DWLEKTLET----KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC---CV--E--- 220 (400)
Q Consensus 153 e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~---~~--~--- 220 (400)
+.+++.++. ...+++|++++|+||||.++|.+++++|+++|++||+++|+||+|..+.+++.... .. .
T Consensus 173 ~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~ 252 (428)
T 1iay_A 173 KAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEM 252 (428)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGG
T ss_pred HHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhcccccc
Confidence 999998863 22358999999999999999999999999999999999999999999776543221 11 1
Q ss_pred ----CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHH
Q 015768 221 ----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKD 293 (400)
Q Consensus 221 ----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~ 293 (400)
.++++++.|+||.+|++|+|+||++.++ +++++.+..... .++.+.+.+.++..+++... ++.++..+.
T Consensus 253 ~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 328 (428)
T 1iay_A 253 TYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN--DDVVNCARKMSS--FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMR 328 (428)
T ss_dssp TTSCTTSEEEEEESTTTSSCGGGCEEEEEESC--HHHHHHHHHHHT--TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEEecchhhcCCCCceEEEEEeCC--HHHHHHHHHHHh--cccCCHHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 4677999999999998999999999854 678888776543 46788999999999998632 356778888
Q ss_pred HHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCC-----CCHHHHHHHHHHhcCeEEeCCCccCC--CCeEEEEecc
Q 015768 294 LVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKH-----LDDFEVVRWLAHRHGVVVIPGGACGC--RGHLRISFGG 366 (400)
Q Consensus 294 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~ 366 (400)
+.++++++.+.|++++ +.+..+.+++|+|++++... .+..+++.+|++++||.+.+|..|+. ++++||+++.
T Consensus 329 ~~~~~~~l~~~L~~~g-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~ 407 (428)
T 1iay_A 329 LGKRHKHFTNGLEVVG-IKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFAN 407 (428)
T ss_dssp HHHHHHHHHHHHHHTT-CCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSS
T ss_pred HHHHHHHHHHHHHhcC-CcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEec
Confidence 8999999999999885 46666767999999987421 12456788887556999999988764 5799999985
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 015768 367 LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 367 ~~~~~~~~~~~~l~~~l~~ 385 (400)
.+++++++++++|++++++
T Consensus 408 ~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 408 MDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp SCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 6899999999999998864
No 50
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5e-43 Score=339.82 Aligned_cols=338 Identities=17% Similarity=0.320 Sum_probs=273.3
Q ss_pred cHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHHhhcC-C--CCCcEEEeCChHHHHHHHHHHhcCCCC----
Q 015768 45 PKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENK-L--YKSSVMVTAGANQAFVNIVLTLCDAGD---- 114 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~---~~~~y~~~~g~~~~~~~~a~~l~~~~~-~--~~~~i~~~~g~t~a~~~~~~~l~~~gd---- 114 (400)
|..+++++.+++.+. ....|++..|..++|+++++++.+.+| + ++++|++|+|+++++..++.++.++||
T Consensus 103 P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d 182 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRT 182 (498)
T ss_dssp CHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSE
T ss_pred CHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCC
Confidence 566667777766642 356799999999999999999998874 4 689999999999999999999998875
Q ss_pred EEEEeCCCccchhHHHHhcCcEEEEeccCCCC-CCCCCHHHHHHhhccCC---CCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSK-TLHPDADWLEKTLETKP---TPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 115 ~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~~~---~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
+|+++.|+|+.+...++..|++++.+ +.+++ +|.+|+++|++.+++.. .+++|++++|+||||.+++.+++++|+
T Consensus 183 ~Vlv~~p~y~~~~~~~~~~g~~~v~~-~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~ 261 (498)
T 3ihj_A 183 GVMIPIPQYPLYSAVISELDAIQVNY-YLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVI 261 (498)
T ss_dssp EEEEEESCCTHHHHHHHHTTCEEEEE-ECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred EEEEeCCCchhHHHHHHHcCCEEEEe-eccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHH
Confidence 99999999999999999999999999 87755 57899999999997521 259999999999999999999999999
Q ss_pred HHHHHcCCEEEEcccccccccCCC-Ccccc------------CCCcEEEEecccccc-CCCcceeEEEE---ccCCcHHH
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGR-KHCCV------------EGDHVVNLFSFSKAY-GMMGWRVGYIA---YPSEVEGF 253 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~-~~~~~------------~~~~~i~~~s~sK~~-g~~g~~~G~i~---~~~~~~~~ 253 (400)
++|++||+++|+||+|..+.+++. +.... ....+++++|+||.+ |++|+|+||++ .+ +++
T Consensus 262 ~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~---~~l 338 (498)
T 3ihj_A 262 HFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLH---PEI 338 (498)
T ss_dssp HHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCC---HHH
T ss_pred HHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCC---HHH
Confidence 999999999999999999988643 22211 123478899999999 78999999998 34 788
Q ss_pred HHHHHHhhccCCcCccHHHHHHHHHHhcC---C----cH---HHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768 254 ATQLLKVQDNIPICASIISQHLALYSLQT---G----PE---WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW 323 (400)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~---~----~~---~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 323 (400)
++.+..... ...+++.+.+.++..+++. + .+ +..++++.++++++.+.+.|++++++.+..+++++|+|
T Consensus 339 ~~~l~~~~~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~ 417 (498)
T 3ihj_A 339 KGQLVKLLS-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAF 417 (498)
T ss_dssp HHHHHHHHH-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEEC
T ss_pred HHHHHHHHh-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEE
Confidence 888877654 4566788999988888863 1 12 23566788899999999999998777888899899999
Q ss_pred eeCCCC----------CCCHHHH-HHHHHHhcCeEEeCCCccCC---CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 324 ARLPEK----------HLDDFEV-VRWLAHRHGVVVIPGGACGC---RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 324 ~~~~~~----------~~~~~~~-~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++++.. ..+.+++ +.++++++||.+.||..|+. ++++|++++ .+++++++++++|+++++++.+
T Consensus 418 ~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~-~~~e~l~~~i~~L~~~~~~~~~ 495 (498)
T 3ihj_A 418 PRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL-PPVEKLKTVLQKVKDFHINFLE 495 (498)
T ss_dssp CEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 876421 1234454 66677789999999999873 469999997 5999999999999999998865
No 51
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=2.2e-43 Score=336.39 Aligned_cols=364 Identities=17% Similarity=0.152 Sum_probs=290.6
Q ss_pred hhHHHHhhhcCchHHHHHHHHHhc--CCCeEEcCCC---CCCCCC--cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH
Q 015768 5 AKLAKRALETEMPIMVQIQELVRG--AKNAVSLAQG---VVYWQP--PKMAMEKVKELVWDPSISKYGADEGLPELRDAL 77 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~---~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~ 77 (400)
|++++|+.+...+....+.+.+.. .+++|+|+.| +++..+ ++.+.+++.+.+.+.....|++..|..++++++
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 101 (420)
T 4f4e_A 22 MSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDASV 101 (420)
T ss_dssp CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHH
T ss_pred cCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHH
Confidence 567888888777777777776643 4689999999 566543 489999999988875567898889999999999
Q ss_pred HHHHHhhcCC--CCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCC
Q 015768 78 VKKLNQENKL--YKS--SVMVTAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHP 150 (400)
Q Consensus 78 a~~l~~~~~~--~~~--~i~~~~g~t~a~~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~ 150 (400)
++++....+. +++ +|++|+|+++|+..++ .++.++||+|+++.|+|.++...++..|++++.+ |. +++++.+
T Consensus 102 a~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~ 180 (420)
T 4f4e_A 102 QKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAY-PYYDAKTNGV 180 (420)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEE-ECEETTTTEE
T ss_pred HHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEe-eeeccccCcc
Confidence 9999766542 467 8999999999999995 4567899999999999999999999999999999 87 4456678
Q ss_pred CHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC-cc-----ccCCCc
Q 015768 151 DADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK-HC-----CVEGDH 223 (400)
Q Consensus 151 ~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-~~-----~~~~~~ 223 (400)
|++.+++.++.. +..+++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.. .. ....++
T Consensus 181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 260 (420)
T 4f4e_A 181 NFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLN 260 (420)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCC
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCC
Confidence 999999999732 22488888999999999999999999999999999999999999999886421 11 123578
Q ss_pred EEEEeccccccCCCcceeEEEEccCCcHHHHHH----HHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKD 293 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~ 293 (400)
+++++|+||.+|++|+|+||++.....+++++. +.........+++.+.+.++..++... .+++++++++
T Consensus 261 ~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 340 (420)
T 4f4e_A 261 VFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMRDR 340 (420)
T ss_dssp EEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 899999999999899999998642111555443 333333345567888888888888763 3557888899
Q ss_pred HHHHHHHHHHHhccC---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHH
Q 015768 294 LVRNREIIREALSPL---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVED 370 (400)
Q Consensus 294 ~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~ 370 (400)
++++++.+.+.|+++ +++.+..+.+++|+|+.++ .+.+ ..+++++||.+.|+. |++++..+++
T Consensus 341 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~-~~~l~~~gI~v~~~~--------Ris~~~~~~~ 406 (420)
T 4f4e_A 341 IRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT-----SAQV-DRLREEFGIYAVSTG--------RICVAALNTR 406 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC-----HHHH-HHHHHHHCEECCTTS--------EEEGGGCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC-----HHHH-HHHHHhCCEEecCCC--------eEEEecCCHH
Confidence 999999999999987 3456777788999998774 3444 445568999999853 9999876788
Q ss_pred HHHHHHHHHHHHH
Q 015768 371 DCKAAADRLRRGL 383 (400)
Q Consensus 371 ~~~~~~~~l~~~l 383 (400)
++++++++|++++
T Consensus 407 ~i~~~~~~l~~~l 419 (420)
T 4f4e_A 407 NLDVVANAIAAVL 419 (420)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999876
No 52
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=1.7e-43 Score=335.13 Aligned_cols=341 Identities=22% Similarity=0.320 Sum_probs=267.4
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCChHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAGANQAF 102 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g~t~a~ 102 (400)
.++++|+|+.+.+++++++.+++++.+.+.+. ....|++..+..++++++++++. +| +++++|++|+|+++++
T Consensus 31 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~--~g~~~~~~v~~~~G~~~al 108 (400)
T 3asa_A 31 PQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY--RGFVDAKEIFISDGAKVDL 108 (400)
T ss_dssp TTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--TTSSCGGGEEEESCHHHHH
T ss_pred CCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--cCCCCHHHEEEccChHHHH
Confidence 36789999999998888999999998877531 24568777889999999999964 46 6789999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcE-EEEeccCCCC-CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVT-HILVGPCSSK-TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~ 180 (400)
..++. +.++||+|+++.|+|+++...++..|.+ ++.+ |.+++ ++..+++. + + .+++|++++|+||||.+
T Consensus 109 ~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~l~~----~-~--~~~~v~l~~p~nptG~~ 179 (400)
T 3asa_A 109 FRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIAL-PCLQENAFFPEFPE----D-T--HIDILCLCSPNNPTGTV 179 (400)
T ss_dssp HHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEE-ECCGGGTTCCCCCT----T-C--CCSEEEEESSCTTTCCC
T ss_pred HHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEec-ccchhcCcccChhh----c-c--CccEEEEeCCCCCCCCc
Confidence 98765 4578999999999999999999999998 8888 77653 34444322 1 2 35999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC---ccccC--CCcEEEEeccccccCCCcceeEEEEccCCcHHH--
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF-- 253 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~-- 253 (400)
+|.+++++|+++|+++|+++|+||+|+.+.+++.. ..... .+++++++|+||.+|++|+|+||++.++ ++
T Consensus 180 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~---~~~~ 256 (400)
T 3asa_A 180 LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQ---ELTY 256 (400)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCT---TCBC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeCh---hhcc
Confidence 99999999999999999999999999988765431 11112 3468999999999998999999999984 44
Q ss_pred -----HHHHHHhhccCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEee-C
Q 015768 254 -----ATQLLKVQDNIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR-L 326 (400)
Q Consensus 254 -----~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~ 326 (400)
++.+.......++ +++.+.+.++..+|+.. +.++.++.++++++++.+.|++++ +.+..+.+++++|++ +
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~ 333 (400)
T 3asa_A 257 ADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL--PQLEAIHYYRENSDLLRKALLATG-FEVFGGEHAPYLWVKPT 333 (400)
T ss_dssp TTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHHTT-CEEEECSSSSEEEEECC
T ss_pred chhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHHHHCC-CeeeCCCCceEEEEecc
Confidence 4444322222233 57899999998888764 567778888999999999998875 467666678999999 7
Q ss_pred CCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 327 PEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 327 ~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+.. .+..+++.++++++||.+.||..|. .++++||++. .+++++++++++|++++++..
T Consensus 334 ~~~-~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~-~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 334 QAN-ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL-GKREDILAACERLQMAPALQS 394 (400)
T ss_dssp CTT-CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC-SCHHHHHHHHHHHHC------
T ss_pred CCC-CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee-CCHHHHHHHHHHHHHHHHhhh
Confidence 643 2455788888767799999998885 3679999965 489999999999999987653
No 53
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.1e-42 Score=324.26 Aligned_cols=321 Identities=22% Similarity=0.289 Sum_probs=267.5
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
+++|+|+.+.+++++|+.+ ++. ....|++. +..++++++++++ ++++++|++++|++++++.++.++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v------a~~--~~~~Y~~~-~~~~lr~~la~~~----~~~~~~v~~~~G~~~ai~~~~~~~ 95 (356)
T 1fg7_A 29 NGDVWLNANEYPTAVEFQL------TQQ--TLNRYPEC-QPKAVIENYAQYA----GVKPEQVLVSRGADEGIELLIRAF 95 (356)
T ss_dssp TCSEECSSCCCSSCCCCCC------CCC--CTTSCCCS-SCHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHHHHHH
T ss_pred CceEEeeCCCCCCCCCHhH------hhh--hhccCCCc-cHHHHHHHHHHHh----CCChHHEEEcCCHHHHHHHHHHHH
Confidence 4689999999999877776 222 25678554 5889999999998 778899999999999999999999
Q ss_pred cCCC-CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 110 CDAG-DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 110 ~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.++| |+|+++.|+|+++...++..|++++.+ |.++ ++.+|++.+++.++ + +++|++++|+||||.++|.+++++
T Consensus 96 ~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~-~--~~~v~l~~p~nptG~~~~~~~l~~ 170 (356)
T 1fg7_A 96 CEPGKDAILYCPPTYGMYSVSAETIGVECRTV-PTLD-NWQLDLQGISDKLD-G--VKVVYVCSPNNPTGQLINPQDFRT 170 (356)
T ss_dssp CCTTTCEEEECSSSCTHHHHHHHHHTCEEEEC-CCCT-TSCCCHHHHHTSCT-T--EEEEEEESSCTTTCCCCCHHHHHH
T ss_pred hCCCCCEEEEeCCChHHHHHHHHHcCCEEEEe-eCCC-CCCCCHHHHHHHhc-C--CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 9999 999999999999999999999999999 8764 45789999999886 4 499999999999999999999999
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcC
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPIC 267 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~ 267 (400)
|+++|+ +|+++|+||+|..+........ ....+++++++|+||.+|++|+|+||++.+ +++++.+..... +++
T Consensus 171 l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~~ 244 (356)
T 1fg7_A 171 LLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN---EEVINLLMKVIA--PYP 244 (356)
T ss_dssp HHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC---HHHHHHHHHHSC--SSC
T ss_pred HHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC---HHHHHHHHHhcC--CCC
Confidence 999999 9999999999998763211111 123567899999999999999999999997 788888887654 557
Q ss_pred ccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCe
Q 015768 268 ASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGV 346 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi 346 (400)
++.+.+.++..+|+... +++++..++++++++++.+.|++++.+....+.+++|+|++++ +..++.++| .++||
T Consensus 245 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L-~~~gI 319 (356)
T 1fg7_A 245 LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK----ASSAVFKSL-WDQGI 319 (356)
T ss_dssp SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET----THHHHHHHH-HHTTE
T ss_pred CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC----CHHHHHHHH-HHCCE
Confidence 89999999999997521 2378888899999999999999887422333455889999987 467888888 58999
Q ss_pred EEeC-CCccCCCCeEEEEeccCCHHHHHHHHHHHHH
Q 015768 347 VVIP-GGACGCRGHLRISFGGLVEDDCKAAADRLRR 381 (400)
Q Consensus 347 ~v~~-g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~ 381 (400)
.+.+ |..|+.++++||+++ +++++++++++|++
T Consensus 320 ~v~~~g~~~~~~~~iRis~~--~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 320 ILRDQNKQPSLSGCLRITVG--TREESQRVIDALRA 353 (356)
T ss_dssp ECEECTTSTTCTTEEEEECC--CHHHHHHHHHHHHT
T ss_pred EEEECCCCCCCCCeEEEEeC--CHHHHHHHHHHHHh
Confidence 9999 888877789999998 47888888888765
No 54
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=7.2e-43 Score=332.77 Aligned_cols=342 Identities=16% Similarity=0.164 Sum_probs=278.8
Q ss_pred CCCeEEcCCCCC-----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 29 AKNAVSLAQGVV-----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 29 ~~~~i~~~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
+.++|+|+.|.+ ++++++.+.+++.+..... ...|++..|.+++++++++++.+.++.+ +++|++|+|+++++
T Consensus 37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al 115 (418)
T 3rq1_A 37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGI 115 (418)
T ss_dssp GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHH
T ss_pred CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHH
Confidence 678999999975 6778888888887654322 4568888899999999999997776532 23999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCC-CCCC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNP-GNPS 177 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p-~npt 177 (400)
..++.++.++||+|+++.|+|+++...++..|.+++.+ |.+++++.+|++.+++.+++ ++ .+++++++| +|||
T Consensus 116 ~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~~~~~-~~~vi~~~p~~NPt 193 (418)
T 3rq1_A 116 HHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTY-SLFDEHNNFNHEAFQNRVNELAAKQT-NVVVIFNTPGNNPT 193 (418)
T ss_dssp HHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEE-CSBCTTSSBCHHHHHHHHHHHHHHCS-EEEEEEECSSCTTT
T ss_pred HHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEE-eeeCCCCCcCHHHHHHHHHHhhccCC-CEEEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999 88655567899999999874 43 237888899 9999
Q ss_pred ccCCCHHHHHHHHHHHH------HcCCEEEEcccccccccCCCCc---ccc---CCCc--EEEEeccccccCCCcceeEE
Q 015768 178 GTYIPERLLKRISDLCK------AAGSWLVVDNTYEYFMYDGRKH---CCV---EGDH--VVNLFSFSKAYGMMGWRVGY 243 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~------~~~~~li~D~a~~~~~~~~~~~---~~~---~~~~--~i~~~s~sK~~g~~g~~~G~ 243 (400)
|.+++.+++++|+++|+ +||+++|+||+|.++.+.+... ... ..++ +++++|+||.+|++|+|+||
T Consensus 194 G~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~ 273 (418)
T 3rq1_A 194 GYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGA 273 (418)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEE
T ss_pred CCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceE
Confidence 99999999999999999 8999999999999887654311 111 1233 58899999999999999999
Q ss_pred EEc---cCCcHHHHHHHHHhhccC----CcCccHHHHHHHHHHhcCCc---HH---HHHHHHHHHHHHHHHHHHhccCCC
Q 015768 244 IAY---PSEVEGFATQLLKVQDNI----PICASIISQHLALYSLQTGP---EW---VTERVKDLVRNREIIREALSPLGE 310 (400)
Q Consensus 244 i~~---~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~---~~---~~~~~~~~~~~~~~l~~~L~~~~~ 310 (400)
++. + +++++.+....... ..+++.+++.++..+++... .| ..++++.++++++.+.+.|++++
T Consensus 274 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 349 (418)
T 3rq1_A 274 MIGISDD---EEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVG- 349 (418)
T ss_dssp EEEEESS---HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred EEEEeCC---HHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 988 5 78888887654321 24578899999998887631 12 23556778888899999998885
Q ss_pred CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+.+..+.+++|+|+.++ +..++++.| .++||.+.|| ++++||+++..+++++++++++|+++++++.
T Consensus 350 ~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~gi~v~~g-----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 350 LPMLPYRGGFFITIPTD----SANAICEEL-KKEHIYVIAL-----ANGIRIAACGIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp CCCCCCCSSSEEEEECT----THHHHHHHH-HHTTEECEEC-----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred CCCCCCCceEEEEcCCC----CHHHHHHHH-HhCCEEEecC-----CCCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 47777888899998875 577888766 5899999996 4789999886699999999999999998764
No 55
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.1e-42 Score=333.16 Aligned_cols=351 Identities=21% Similarity=0.310 Sum_probs=286.4
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-----------CCCCCCCCCcHHHHHHHHHHHHhhcC----CCCCcEEE
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-----------ISKYGADEGLPELRDALVKKLNQENK----LYKSSVMV 94 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~y~~~~g~~~~~~~~a~~l~~~~~----~~~~~i~~ 94 (400)
..+|+|+.+.+.+. ++.+.+++.+...... ...|++..|.+++++++++++.+.++ ++++++++
T Consensus 38 ~~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~ 116 (435)
T 3piu_A 38 NGIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVL 116 (435)
T ss_dssp TSBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEE
T ss_pred CCeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEE
Confidence 44788888877765 6677777776544211 14588888999999999999986654 56899999
Q ss_pred eCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEeccCCCC-CCCCCHHHHHHhhcc----CCCCeEE
Q 015768 95 TAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSSK-TLHPDADWLEKTLET----KPTPKLV 168 (400)
Q Consensus 95 ~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~e~l~~~l~~----~~~~~~v 168 (400)
|+|+++|+..++.++.++||.|+++.|+|.++...++ ..|.+++.+ +.+++ ++.+|++.+++.+++ ...+++|
T Consensus 117 ~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v 195 (435)
T 3piu_A 117 TAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPI-HCTSSNGFQITETALEEAYQEAEKRNLRVKGV 195 (435)
T ss_dssp EEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEE-ECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEe-eCCCccCCcCCHHHHHHHHHHHHhcCCCeEEE
Confidence 9999999999999999999999999999999998887 789999999 87654 467899999999874 2235999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc-----cC---------CCcEEEEecccccc
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-----VE---------GDHVVNLFSFSKAY 234 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-----~~---------~~~~i~~~s~sK~~ 234 (400)
++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++..... .. .+++++++|+||.+
T Consensus 196 ~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~ 275 (435)
T 3piu_A 196 LVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL 275 (435)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc
Confidence 99999999999999999999999999999999999999988776543221 11 46779999999999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP---EWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
|++|+|+||+++++ +++.+.+..... .++.+++.+.++..+++... ++..+.++++.++++.+.+.|++++ +
T Consensus 276 g~~G~r~G~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 350 (435)
T 3piu_A 276 GLPGFRVGAIYSND--DMVVAAATKMSS--FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSG-I 350 (435)
T ss_dssp CCGGGCEEEEEESC--HHHHHHHHHHGG--GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-C
T ss_pred CCCceeEEEEEeCC--HHHHHHHHHHhh--cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 98999999999864 677777765543 45567888888888887532 2456777888899999999999885 4
Q ss_pred cccCCCCceEEEeeCCCCCC-----CHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKHL-----DDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
.+..+.+++++|+.++.... +..++..+|++++||.+.||..|+ .++++||+++..+++++++++++|+++++
T Consensus 351 ~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~ 430 (435)
T 3piu_A 351 SCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVG 430 (435)
T ss_dssp EECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHHHH
T ss_pred cccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 77778878999999975321 245788888766699999998875 47899999986689999999999999998
Q ss_pred HHh
Q 015768 385 ELV 387 (400)
Q Consensus 385 ~~~ 387 (400)
++.
T Consensus 431 ~~~ 433 (435)
T 3piu_A 431 EYY 433 (435)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 56
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=2.9e-42 Score=322.59 Aligned_cols=333 Identities=17% Similarity=0.233 Sum_probs=274.7
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
+++++|+|+.+.+++++++++++++.+.+.+ ...|+ ..+..++++++++++ ++++++|++|+|+++++..++.
T Consensus 22 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~----~~~~~~v~~~~g~~~al~~~~~ 94 (364)
T 1lc5_A 22 SPDQLLDFSANINPLGMPVSVKRALIDNLDC--IERYP-DADYFHLHQALARHH----QVPASWILAGNGETESIFTVAS 94 (364)
T ss_dssp CGGGSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCC-CTTCHHHHHHHHHHH----TSCGGGEEEESSHHHHHHHHHH
T ss_pred CccceEEeccccCCCCCCHHHHHHHHHHHHH--hhcCC-CCCHHHHHHHHHHHH----CcCHHHEEECCCHHHHHHHHHH
Confidence 4567999999998888899999999998765 45674 457899999999998 7778999999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
++ +||+|+++.|+|+++...++..|.+++.+ |.++ +++.+ ++.+.+.+.++ ++++++++|+||||.++|.+++
T Consensus 95 ~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~-l~~~~~~~~~~--~~~v~i~~p~nptG~~~~~~~l 168 (364)
T 1lc5_A 95 GL--KPRRAMIVTPGFAEYGRALAQSGCEIRRW-SLREADGWQL-TDAILEALTPD--LDCLFLCTPNNPTGLLPERPLL 168 (364)
T ss_dssp HH--CCSEEEEEESCCTHHHHHHHHTTCEEEEE-ECCGGGTTCC-CTTHHHHCCTT--CCEEEEESSCTTTCCCCCHHHH
T ss_pred Hc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEE-eCCcccccch-hHHHHHhccCC--CCEEEEeCCCCCCCCCCCHHHH
Confidence 99 67999999999999999999999999999 8775 45544 56565555544 4899999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcceeEEEE-ccCCcHHHHHHHHHhhcc
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~G~i~-~~~~~~~~~~~l~~~~~~ 263 (400)
++|+++|++||+++|+||+|+.+.+++..... ...+++++++|+||++|++|+|+||++ .+ +++++.+.....
T Consensus 169 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---~~~~~~l~~~~~- 244 (364)
T 1lc5_A 169 QAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD---DAAMARMRRQQM- 244 (364)
T ss_dssp HHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC---HHHHHHHHHHSC-
T ss_pred HHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECC---HHHHHHHHHhCC-
Confidence 99999999999999999999988765322221 235688999999999988999999999 77 788888877654
Q ss_pred CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHh
Q 015768 264 IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHR 343 (400)
Q Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 343 (400)
+++++.+.+.++..+|+. .+++++..+.++++++++.+.|++++++.+.++. ++|+|++++. +..++..+|. +
T Consensus 245 -~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-g~~~~~~~~~---~~~~l~~~l~-~ 317 (364)
T 1lc5_A 245 -PWSVNALAALAGEVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCER---EDIDLQRRLL-T 317 (364)
T ss_dssp -TTCSCHHHHHHHHHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCS-SSEEEEEESC---TTCCHHHHHH-T
T ss_pred -CCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCC-CeEEEEECCC---cHHHHHHHHH-H
Confidence 677899999999999987 5678888899999999999999988665666554 7788888874 2446777776 7
Q ss_pred cCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 344 HGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 344 ~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+||.+.+|..|. .++++||+++ +.++++++++.|+++++++
T Consensus 318 ~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 318 QRILIRSCANYPGLDSRYYRVAIR--SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp TTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHC---
T ss_pred CCcEEeeCcccCCCCCCEEEEEeC--CHHHHHHHHHHHHHHhhcc
Confidence 899999998875 3689999987 4788888888888877654
No 57
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=4.9e-42 Score=320.57 Aligned_cols=330 Identities=16% Similarity=0.217 Sum_probs=276.7
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIV 106 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~ 106 (400)
.+++++|+|+.+.+++++|+++++++.+.+.+ ...| +..+..++++++++++ +++++++++|+|++++++.++
T Consensus 23 ~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~----~~~~~~i~~~~g~t~al~~~~ 95 (361)
T 3ftb_A 23 FKGRELLDYSSNINPLGIPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYL----KLKDIGIVLGNGASEIIELSI 95 (361)
T ss_dssp -----CEETTCCCCTTCSCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHH----TCCSCEEEEESSHHHHHHHHH
T ss_pred cCCCCEEEecCCCCCCCCCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHh----CCCcceEEEcCCHHHHHHHHH
Confidence 46788999999999998899999999988876 4556 4567899999999988 778899999999999999999
Q ss_pred HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 107 LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 107 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
.++ |+|+++.|+|+++...++..|++++.+ |.++++ .++++++++.+++ + +++++++|+||||.+++.+++
T Consensus 96 ~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~~~~~l~~~l~~-~--~~v~i~~p~nptG~~~~~~~l 166 (361)
T 3ftb_A 96 SLF----EKILIIVPSYAEYEINAKKHGVSVVFS-YLDENM-CIDYEDIISKIDD-V--DSVIIGNPNNPNGGLINKEKF 166 (361)
T ss_dssp TTC----SEEEEEESCCTHHHHHHHHTTCEEEEE-ECCTTS-CCCHHHHHHHTTT-C--SEEEEETTBTTTTBCCCHHHH
T ss_pred HHc----CcEEEecCChHHHHHHHHHcCCeEEEe-ecCccc-CCCHHHHHHhccC-C--CEEEEeCCCCCCCCCCCHHHH
Confidence 998 899999999999999999999999999 887663 4578999999976 4 999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCC---ccccCCCcEEEEeccccccCCCcceeEEEE-ccCCcHHHHHHHHHhhc
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRK---HCCVEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFATQLLKVQD 262 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~-~~~~~~~~~~~l~~~~~ 262 (400)
++|+++|++||+++|+||+|+.+.++... ......+++++++|+||.+|++|+|+||++ .+ +++.+.+.....
T Consensus 167 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~---~~~~~~~~~~~~ 243 (361)
T 3ftb_A 167 IHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN---KEIAAKIKAKQN 243 (361)
T ss_dssp HHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC---HHHHHHHHTTSC
T ss_pred HHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC---HHHHHHHHhhCC
Confidence 99999999999999999999988875111 111235678999999999998999999998 66 888888887654
Q ss_pred cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc-ccCCCCceEEEeeCCCCCCCHHHHHHHHH
Q 015768 263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA-VKGGEGAIYLWARLPEKHLDDFEVVRWLA 341 (400)
Q Consensus 263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (400)
+++++.+.+.++..+|+. .+++++.++++.++++++.+.|++++.+. +.++. +.++|++++. .+..++...|.
T Consensus 244 --~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~l~~~l~ 317 (361)
T 3ftb_A 244 --PWNINCFAEMAAINCLKD-TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPH-ANFVLCRLEN--ISGEKLYDSLL 317 (361)
T ss_dssp --TTCSCHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCS-SSEEEEEESS--SCHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCC-CeEEEEEcCC--CCHHHHHHHHH
Confidence 568899999999999986 67788999999999999999999987766 66565 7778888875 36888998886
Q ss_pred HhcCeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 342 HRHGVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 342 ~~~gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
++||.+.+|..|+. ++++|++++ +.++++++++.|++..+
T Consensus 318 -~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 318 -KEDIVIRRCCNFIGLDDSFVRFAIK--DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp -TTTEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHH
T ss_pred -HCCeEEeeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHh
Confidence 67999999998863 689999998 46777777776666554
No 58
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=1.2e-42 Score=330.85 Aligned_cols=339 Identities=16% Similarity=0.186 Sum_probs=275.9
Q ss_pred CCCeEEcCCCCC-----CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768 29 AKNAVSLAQGVV-----YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (400)
Q Consensus 29 ~~~~i~~~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~ 102 (400)
++++|+|+.|++ ++++++.+.+++.+.... ....|++..|..++++++++++.+..+. +++++++|+|+++|+
T Consensus 36 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al 114 (413)
T 3t18_A 36 REAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAI 114 (413)
T ss_dssp GGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHH
T ss_pred ccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHH
Confidence 678999999986 677888898888764332 2456878889999999999999776653 244999999999999
Q ss_pred HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc----CCCCe-EEEEeCC-CCC
Q 015768 103 VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET----KPTPK-LVSVVNP-GNP 176 (400)
Q Consensus 103 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~-~v~l~~p-~np 176 (400)
..++.+++++||+|+++.|+|+++...++..|.+++.+ |.+++++.+|++.+++.+++ ++ + ++++++| +||
T Consensus 115 ~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~~~~--~~~vi~~~p~~NP 191 (413)
T 3t18_A 115 RSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTF-EFFTDDFAFNIDVYKEAIDEGIRDSD--RIASLINSPGNNP 191 (413)
T ss_dssp HHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEE-CCBCTTSSBCHHHHHHHHHHHHHHCS--EEEEEEECSSCTT
T ss_pred HHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEe-eccCCCCCcCHHHHHHHHHHHhhcCC--CEEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999 88544467899999999875 44 6 7888899 999
Q ss_pred CccCCCHHHHHHHHHHHH------HcCCEEEEcccccccccCCCCccc---c---CCCc--EEEEeccccccCCCcceeE
Q 015768 177 SGTYIPERLLKRISDLCK------AAGSWLVVDNTYEYFMYDGRKHCC---V---EGDH--VVNLFSFSKAYGMMGWRVG 242 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~------~~~~~li~D~a~~~~~~~~~~~~~---~---~~~~--~i~~~s~sK~~g~~g~~~G 242 (400)
||.+++.+++.+|+++|+ +||+++|+||+|.++.+.+..... . ..++ +++++|+||.+|++|+|+|
T Consensus 192 tG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG 271 (413)
T 3t18_A 192 TGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSG 271 (413)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCE
T ss_pred CCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcE
Confidence 999999999999999999 899999999999998876542211 1 1223 4888999999999999999
Q ss_pred EEEc---cCCcHHHHHHHHHhhccC----CcCccHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHhccCCC
Q 015768 243 YIAY---PSEVEGFATQLLKVQDNI----PICASIISQHLALYSLQTGP-----EWVTERVKDLVRNREIIREALSPLGE 310 (400)
Q Consensus 243 ~i~~---~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~~~ 310 (400)
|++. + +++++.+....... ..+++.+.+.++..+++... ++.+++++.++++++.+.+.|++++
T Consensus 272 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g- 347 (413)
T 3t18_A 272 AAVGISSS---KEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENK- 347 (413)
T ss_dssp EEEEEESC---HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEEecCC---HHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 9998 5 78888887654321 24578889999888887531 2345667788889999999999885
Q ss_pred CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 311 GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+.+..+.+++|+|+++. +..++...| .++||.+.|| ++++||+++..+++++ +++|.++++++.+
T Consensus 348 ~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~gv~v~~g-----~~~iRis~~~~~~~~~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 348 LTMIPYFGGFFTFIPTD----KAFDIVKDL-EKENIFTIPS-----AKGIRVAICGVGEEKI---PKLVQRLAFYTNK 412 (413)
T ss_dssp CCCBCCCSSSCEEEECS----CHHHHHHHH-HHTTEECEEC-----SSEEEECTTTSCGGGH---HHHHHHHHHHHHC
T ss_pred CCccCCCceEEEEeCCC----CHHHHHHHH-HhCCEEEecC-----CCceEEEEeeCCHHHH---HHHHHHHHHHHhc
Confidence 47777888899998773 577888766 5899999996 5789999987566666 8999999887653
No 59
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.7e-43 Score=334.35 Aligned_cols=350 Identities=15% Similarity=0.127 Sum_probs=283.9
Q ss_pred HHHhcCCCeEEcCCCCCCCCC---cHHHHHHH--HHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC
Q 015768 24 ELVRGAKNAVSLAQGVVYWQP---PKMAMEKV--KELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA 96 (400)
Q Consensus 24 ~~~~~~~~~i~~~~~~~~~~~---~~~v~~a~--~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~ 96 (400)
..++..+..++|+.|.++... ++.+.+++ .+.+.+. ....|++..|.+++|+++++++ ++++++|++|+
T Consensus 27 ~~~~~~~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~----~~~~~~i~~t~ 102 (427)
T 3ppl_A 27 DELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL----GVPVEQVLAGD 102 (427)
T ss_dssp HHHHHTCCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH----TSCGGGEEECS
T ss_pred HHhhcCCceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh----CCCcceEEEeC
Confidence 344556788999999877532 23466665 5555442 2567988889999999999998 78889999999
Q ss_pred ChHHHH--HHHHHHhcC--C----------CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 97 GANQAF--VNIVLTLCD--A----------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 97 g~t~a~--~~~~~~l~~--~----------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
|+++++ +.++.++.+ | ||+|++++|+|+++...++..|++++.+ |.+++| +|++.+++.++..
T Consensus 103 G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~l~~~l~~~ 179 (427)
T 3ppl_A 103 ASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISV-PMNEDG--PDMDAVEELVKNP 179 (427)
T ss_dssp SCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEE-EEETTE--ECHHHHHHHTTST
T ss_pred CcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEe-CCCCCC--CCHHHHHHHHhcC
Confidence 999999 588888876 6 8999999999999999999999999999 888765 7999999999522
Q ss_pred CCCeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEcccccccccCCCCcc---c-------cCCCcEEEEecc
Q 015768 163 PTPKLVSVV-NPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTYEYFMYDGRKHC---C-------VEGDHVVNLFSF 230 (400)
Q Consensus 163 ~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~-~~~~~~li~D~a~~~~~~~~~~~~---~-------~~~~~~i~~~s~ 230 (400)
.+++|+++ +|+||||.+++.+++++|+++| ++||+++|+||+|+.+.+++.... . ...+++++++|+
T Consensus 180 -~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 258 (427)
T 3ppl_A 180 -QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTST 258 (427)
T ss_dssp -TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEES
T ss_pred -CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEech
Confidence 24888866 7899999999999999999999 999999999999998776543211 1 145789999999
Q ss_pred ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC-C--cHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 231 SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT-G--PEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 231 sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~--~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
||. +++|+|+||++.+ +++++.+.......+++++.+.+.++..+++. + .++..+.++.++++++.+.+.|.+
T Consensus 259 SK~-~~~G~r~G~~~~~---~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 334 (427)
T 3ppl_A 259 SKI-TLAGAGVSFFLTS---AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDS 334 (427)
T ss_dssp TTT-SCTTSSCEEEECC---HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhc-cCcCccEEEEEcC---HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 5699999999999 88888888877767788899999999999986 2 245667777777777777766654
Q ss_pred ----CCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC-CCccC-----CCCeEEEEeccCCHHHHHHHHH
Q 015768 308 ----LGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG-----CRGHLRISFGGLVEDDCKAAAD 377 (400)
Q Consensus 308 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iRi~~~~~~~~~~~~~~~ 377 (400)
++.+.+..|.+++|+|++++.. +..++...+ .++||.+.| |..|. .++++||+++..++++++++++
T Consensus 335 ~l~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l-~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~ 411 (427)
T 3ppl_A 335 RLAEYGVAQWTVPAGGYFISLDVVPG--TASRVAELA-KEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMD 411 (427)
T ss_dssp HHGGGTCCEECCCSBSSCEEEECSTT--CHHHHHHHH-HHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHH
T ss_pred hcCCCCceEEeCCCccEEEEEECCcc--hHHHHHHHH-HHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHH
Confidence 4455677788899999999864 577777766 589999999 44443 4689999998778999999999
Q ss_pred HHHHHHHHHhc
Q 015768 378 RLRRGLEELVK 388 (400)
Q Consensus 378 ~l~~~l~~~~~ 388 (400)
+|.+++++...
T Consensus 412 ~l~~~l~~~~~ 422 (427)
T 3ppl_A 412 GVATCVLLAAA 422 (427)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 60
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.4e-42 Score=330.55 Aligned_cols=359 Identities=19% Similarity=0.240 Sum_probs=274.4
Q ss_pred HHHHHHHh--cCCCeEEcCCCCCCCCCc--HHHHHHHHHhhcCCC----CCCCCCCCCcHHHHHHHHHHHHhhcC--CCC
Q 015768 20 VQIQELVR--GAKNAVSLAQGVVYWQPP--KMAMEKVKELVWDPS----ISKYGADEGLPELRDALVKKLNQENK--LYK 89 (400)
Q Consensus 20 ~~~~~~~~--~~~~~i~~~~~~~~~~~~--~~v~~a~~~~~~~~~----~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~ 89 (400)
..+.+.++ .++++++|+.|.+...++ +.+.+++.+.+.++. ...|++..|.+++|+++++++.+.+| +++
T Consensus 19 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~ 98 (417)
T 3g7q_A 19 RLMEDLNDGLRTPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP 98 (417)
T ss_dssp HHHHHHHC-----CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG
T ss_pred HHHHHHHhhccCCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc
Confidence 33444433 337899999998877432 456666766665431 24688888999999999999988875 468
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCC-----EEEEe-CCCccchhHHHHhc------CcEEEEeccCCCCCCCCCHHHHHH
Q 015768 90 SSVMVTAGANQAFVNIVLTLCDAGD-----SVVMF-APYYFNSYMSFQMT------GVTHILVGPCSSKTLHPDADWLEK 157 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~~~l~~~gd-----~vlv~-~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~e~l~~ 157 (400)
++|++|+|+|+|++.++.++.++|| +|+++ .|+|+++...+... +..+..+ +.+..++.+|++.++
T Consensus 99 ~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~- 176 (417)
T 3g7q_A 99 QNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELL-PEGQFKYHVDFEHLH- 176 (417)
T ss_dssp GGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEE-GGGEEEEECCGGGCC-
T ss_pred ccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCccccc-CCcccccccCHHHhc-
Confidence 9999999999999999999999987 89997 99999887765322 3344444 433234567888887
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--CccccCCCcEEEEeccccccC
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEGDHVVNLFSFSKAYG 235 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~g 235 (400)
+.++ +++|++++|+||||.+++.+++++|+++|++||+++|+||+|+.+..+.. .......+++++++|+|| ++
T Consensus 177 -~~~~--~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~ 252 (417)
T 3g7q_A 177 -IGEE--TGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LG 252 (417)
T ss_dssp -CCTT--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GT
T ss_pred -cccC--ceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-cc
Confidence 5444 49999999999999999999999999999999999999999986432111 111223578999999999 57
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHH-HHHHHHHHHHHHHHHhcc-CCC-
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNREIIREALSP-LGE- 310 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~~~l~~~L~~-~~~- 310 (400)
++|+|+||++.+ +++++.+.......+++++++.+.++..+++... ++..+ +.+.++++++.+.+.|++ ++.
T Consensus 253 ~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 329 (417)
T 3g7q_A 253 LPGSRCGIIIAN---DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEE 329 (417)
T ss_dssp CTTSCCEEEECC---HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred CCCcceEEEEeC---HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 799999999998 8899999887777778889999999999998643 22233 556677777777777766 442
Q ss_pred -CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---------CCeEEEEeccCCHHHHHHHHHHHH
Q 015768 311 -GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------RGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 311 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
+.+..+.+++++|+.++....+..++...| .++||.+.||..|.. ++++||+++. +++++++++++|+
T Consensus 330 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~ 407 (417)
T 3g7q_A 330 RCLIHKPEGAIFLWLWFKDLPITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILA 407 (417)
T ss_dssp TCEEECCCBSSEEEEECTTCSSCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHH
T ss_pred CceeeCCCcceEEEEEcCCCCCCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHH
Confidence 466677889999999986434788888887 489999999998853 4699999997 9999999999999
Q ss_pred HHHHHHhcc
Q 015768 381 RGLEELVKD 389 (400)
Q Consensus 381 ~~l~~~~~~ 389 (400)
++++++.++
T Consensus 408 ~~l~~~~~~ 416 (417)
T 3g7q_A 408 EEIERAWRE 416 (417)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999987653
No 61
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=4.5e-41 Score=314.04 Aligned_cols=329 Identities=19% Similarity=0.249 Sum_probs=270.4
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
+++++|+|+.+.+++++++++++++.+.+.+.. ...|+ ..+..++++++++++ |+++++|++|+|++++++.+
T Consensus 24 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~la~~~----g~~~~~i~~t~g~~~al~~~ 98 (360)
T 3hdo_A 24 DIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYP-SASSQKLREVAGELY----GFDPSWIIMANGSDEVLNNL 98 (360)
T ss_dssp CCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHHHHHHH----TCCGGGEEEESSHHHHHHHH
T ss_pred cccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCC-CCchHHHHHHHHHHh----CcCcceEEEcCCHHHHHHHH
Confidence 467899999999999999999999999987641 34564 346789999999988 67889999999999999999
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
+.++.++||+|+++.|+|+++...++..|++++.+ |.+++ +.+ +.+++.+ + ++++++++|+||||.++|
T Consensus 99 ~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~-~~~--~~l~~~~--~--~~~v~i~~p~nptG~~~~--- 167 (360)
T 3hdo_A 99 IRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTF-GLTGD-FRI--AGFPERY--E--GKVFFLTTPNAPLGPSFP--- 167 (360)
T ss_dssp HHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEE-CBCTT-SSB--TTCCSSB--C--SSEEEEESSCTTTCCCCC---
T ss_pred HHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEe-eCCCC-CCH--HHHHhhc--C--CCEEEEeCCCCCCCCCcC---
Confidence 99999999999999999999999999999999999 87654 333 3333222 2 479999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~ 265 (400)
++++.++|+++|+++|+||+|+.+...+........+++++++|+||.+|++|+|+||++.+ +++++.+..... +
T Consensus 168 ~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~~~~~~~--~ 242 (360)
T 3hdo_A 168 LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR---PEVIAALDKIRD--H 242 (360)
T ss_dssp HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECC---HHHHHHHHHHSC--S
T ss_pred HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeC---HHHHHHHHHhCC--C
Confidence 56677778899999999999998743221111123578899999999999899999999997 889998887664 5
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 345 (400)
++++.+.+.++..+|+. .+++.+.+++++++++++.+.|++++ +.+.++. +.++|+.++. .+..++...|. ++|
T Consensus 243 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~-~~~~~~~~~~--~~~~~l~~~l~-~~g 316 (360)
T 3hdo_A 243 YNLDRLAQAACVAALRD-QAYLSECCRRIRETREWFTTELRSIG-YDVIPSQ-GNYLFATPPD--RDGKRVYDGLY-ARK 316 (360)
T ss_dssp CCSCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTT-CEECCCS-SSEEEEECTT--CCHHHHHHHHH-HTT
T ss_pred CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CEEcCCC-ccEEEEECCC--CCHHHHHHHHH-HCC
Confidence 77899999999999996 67788999999999999999999884 4665554 7788888874 36788888775 789
Q ss_pred eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
|.+.++..+..++++||+++ ++++++++++.|++..+.
T Consensus 317 i~v~~~~~~~~~~~iRis~~--~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 317 VLVRHFSDPLLAHGMRISIG--TREEMEQTLAALKEIGEG 354 (360)
T ss_dssp EECBCCCSTTTTTSEEEECC--CHHHHHHHHHHHHHHHC-
T ss_pred EEEEECCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHhcc
Confidence 99999887666799999998 588888888887766543
No 62
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1.2e-42 Score=331.64 Aligned_cols=358 Identities=18% Similarity=0.213 Sum_probs=286.9
Q ss_pred hHHHHHHHHHhcCCCeEEcCCCCCC---CCCcHHHHHHHH--HhhcCC-CCCCC-CCCCCcHHHHHHHHHHHHhhcCCCC
Q 015768 17 PIMVQIQELVRGAKNAVSLAQGVVY---WQPPKMAMEKVK--ELVWDP-SISKY-GADEGLPELRDALVKKLNQENKLYK 89 (400)
Q Consensus 17 ~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~g~~~~~~~~a~~l~~~~~~~~ 89 (400)
..+.++.++ +...+.++|+.|.++ ++.|+++++++. +.+..+ ....| ++..|.+++|+++++++ ++++
T Consensus 13 ~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~----~~~~ 87 (423)
T 3ez1_A 13 LARQAYEAF-KARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL----DVKA 87 (423)
T ss_dssp HHHHHHHHH-HHHTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT----TSCG
T ss_pred HHHHHHHHh-hcCCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh----CCCh
Confidence 334444444 444678999999988 677888888885 555532 14678 78889999999999998 7888
Q ss_pred CcEEEeCChHHHHH--HHHHHhcC--C---------CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHH
Q 015768 90 SSVMVTAGANQAFV--NIVLTLCD--A---------GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156 (400)
Q Consensus 90 ~~i~~~~g~t~a~~--~~~~~l~~--~---------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~ 156 (400)
++|++|+|+++++. .++.++.+ + ||+|+++.|+|+++...++..|++++.+ |.+++| +|++.++
T Consensus 88 ~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v-~~~~~g--~d~~~l~ 164 (423)
T 3ez1_A 88 ENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTV-DMQSDG--PDVDAVE 164 (423)
T ss_dssp GGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEE-EEETTE--ECHHHHH
T ss_pred hhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEec-cCCCCC--CCHHHHH
Confidence 99999999999998 88888877 7 5999999999999999999999999999 887664 7999999
Q ss_pred HhhccCCCCeEEEEe-CCCCCCccCCCHHHHHHHHHHH-HHcCCEEEEcccccccccCC-C--Ccc---c-----cCCCc
Q 015768 157 KTLETKPTPKLVSVV-NPGNPSGTYIPERLLKRISDLC-KAAGSWLVVDNTYEYFMYDG-R--KHC---C-----VEGDH 223 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~-~~~~~~li~D~a~~~~~~~~-~--~~~---~-----~~~~~ 223 (400)
+.++....+++|++. +|+||||.+++.+++++|+++| ++||+++|+||+|..+.+.+ . ... . ...++
T Consensus 165 ~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (423)
T 3ez1_A 165 RLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDR 244 (423)
T ss_dssp HHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTS
T ss_pred HHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCe
Confidence 999522335888765 7899999999999999999999 99999999999999655433 1 111 1 24578
Q ss_pred EEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcC--C--cHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQT--G--PEWVTERVKDLVRNRE 299 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~--~--~~~~~~~~~~~~~~~~ 299 (400)
+++++|+||.+ ++|+|+||++.+ +++++.+.......+++++.+.+.++..+++. + .++..+..+.+.++++
T Consensus 245 ~i~~~S~sK~~-~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 320 (423)
T 3ez1_A 245 AFVFASTSKIT-FAGAGLGFVASS---EDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFR 320 (423)
T ss_dssp EEEEEESTTTS-CSSSSCEEEEEC---HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCchhhc-cCCcceEEEEeC---HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 99999999984 699999999999 78999998887777888999999999998886 3 2455666666666666
Q ss_pred HHHHHhc----cCC-CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC-CCccC-----CCCeEEEEeccCC
Q 015768 300 IIREALS----PLG-EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-GGACG-----CRGHLRISFGGLV 368 (400)
Q Consensus 300 ~l~~~L~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~~-----~~~~iRi~~~~~~ 368 (400)
.+.+.|. +++ .+.+..|.+++|+|++++.. +.+.+...+ .++||.+.| |..|. .++++||+++..+
T Consensus 321 ~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~l-~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~ 397 (423)
T 3ez1_A 321 AVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEP--VADRVVKLA-EAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPP 397 (423)
T ss_dssp HHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSS--CHHHHHHHH-HHTTEECCCTTTTSSTTCCSSSCEEEECCSSSC
T ss_pred HHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCC--cHHHHHHHH-HHCCcEEecCcccccCCCCCCCCeEEEEcCCCC
Confidence 6655554 455 34666788899999999864 466676655 589999999 66664 3689999998668
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 015768 369 EDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 369 ~~~~~~~~~~l~~~l~~~~~~ 389 (400)
++++++++++|++++++...+
T Consensus 398 ~~~i~~~~~~l~~~l~~~~~~ 418 (423)
T 3ez1_A 398 VEEVRTAMQVVAACIRLATEE 418 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999887543
No 63
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=5.3e-42 Score=326.18 Aligned_cols=361 Identities=17% Similarity=0.149 Sum_probs=284.9
Q ss_pred HHHhhhcCchHHHHHHHHHhc--CCCeEEcCCCCC-CC----CCcHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHH
Q 015768 8 AKRALETEMPIMVQIQELVRG--AKNAVSLAQGVV-YW----QPPKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVK 79 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~-~~----~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~~~~~~a~ 79 (400)
+.|+.....+.+..+.+.++. ++++|+|+.|.+ +. .+++.+.+++.+ .+..+....|++..|.+++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~ 84 (412)
T 1yaa_A 5 FNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAK 84 (412)
T ss_dssp TTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHH
T ss_pred hccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHH
Confidence 455555554555556666553 578999999984 33 467899999998 8765445678888899999999999
Q ss_pred HHHhhcC--CCCCcEEE--eCChHHHHHHHH--HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCH
Q 015768 80 KLNQENK--LYKSSVMV--TAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDA 152 (400)
Q Consensus 80 ~l~~~~~--~~~~~i~~--~~g~t~a~~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~ 152 (400)
++.+.+| +++++|++ |+|+++|++.++ ..+.++||+|+++.|+|+++...++..|++++.+ |. +++++.+|+
T Consensus 85 ~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~ 163 (412)
T 1yaa_A 85 IIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATY-PYWANETKSLDL 163 (412)
T ss_dssp HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEE-ECEETTTTEECH
T ss_pred HHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEE-eeecCCCCccCH
Confidence 9976655 35789999 999999999984 3444699999999999999999999999999999 87 544567899
Q ss_pred HHHHHhhccCCCC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC---C--Cccc-c-CCC--
Q 015768 153 DWLEKTLETKPTP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG---R--KHCC-V-EGD-- 222 (400)
Q Consensus 153 e~l~~~l~~~~~~-~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~---~--~~~~-~-~~~-- 222 (400)
+.+++.+++.+.. +++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++ . +... . ..+
T Consensus 164 ~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (412)
T 1yaa_A 164 NGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTV 243 (412)
T ss_dssp HHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTT
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCC
Confidence 9999998754212 445558999999999999999999999999999999999999887754 1 1111 1 234
Q ss_pred -cEEEEeccccccCCCcceeEEEE--c----cCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cH
Q 015768 223 -HVVNLFSFSKAYGMMGWRVGYIA--Y----PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PE 285 (400)
Q Consensus 223 -~~i~~~s~sK~~g~~g~~~G~i~--~----~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~ 285 (400)
++++++|+||.+|++|+|+||++ . ++ ++ +++.+.........+++.+.+.++..+|+.. .+
T Consensus 244 ~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 321 (412)
T 1yaa_A 244 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQN--KTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWHK 321 (412)
T ss_dssp CCEEEEEECTTTSCCGGGCEEEEEEECCSCTTH--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHH
T ss_pred cceEEEeccCCCCCCcCCcceEEEEEecCCCCC--HHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHHH
Confidence 78999999999997799999998 7 22 55 7777776444444566889999999999874 24
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEE
Q 015768 286 WVTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRI 362 (400)
Q Consensus 286 ~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi 362 (400)
+.++++++++++++.+.+.|++++ .+.+..+.+++++|+.++ .+.+ .++++++||.+.+ ++||
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~l~~~gi~v~~--------~~Ri 387 (412)
T 1yaa_A 322 DMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT-----PQMV-KRLEETHAVYLVA--------SGRA 387 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC-----HHHH-HHHHHHHCEECCT--------TSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCC-----HHHH-HHHHHhCCEEecc--------CcEE
Confidence 678888999999999999999876 356777777899987664 3445 5666689999986 4799
Q ss_pred EeccCCHHHHHHHHHHHHHHHHH
Q 015768 363 SFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+++..+++++++++++|+++++.
T Consensus 388 s~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 388 SIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp EGGGCCTTTHHHHHHHHHHHHHH
T ss_pred EEccCCHhHHHHHHHHHHHHHHh
Confidence 99866899999999999998864
No 64
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=6.9e-42 Score=328.54 Aligned_cols=353 Identities=19% Similarity=0.245 Sum_probs=278.2
Q ss_pred cCCCeE-EcCCCCCCCCCc--HHHHHHHHHhhcC-------CC----CCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCc
Q 015768 28 GAKNAV-SLAQGVVYWQPP--KMAMEKVKELVWD-------PS----ISKYGADEGLPELRDALVKKLNQENK--LYKSS 91 (400)
Q Consensus 28 ~~~~~i-~~~~~~~~~~~~--~~v~~a~~~~~~~-------~~----~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~ 91 (400)
..+++| +|+.|.+..+++ +.+.+++.+.+.+ +. ...|++..|.+++|+++++++.+.+| +++++
T Consensus 29 ~~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~ 108 (444)
T 3if2_A 29 KSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTSEN 108 (444)
T ss_dssp HSSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG
T ss_pred cCchhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHH
Confidence 348899 999998877422 4455566666655 31 25688888999999999999988875 46899
Q ss_pred EEEeCChHHHHHHHHHHhcCCCC--------------EEEEe-CCCccchhHH------HHhcCcEEEEeccCCC-C---
Q 015768 92 VMVTAGANQAFVNIVLTLCDAGD--------------SVVMF-APYYFNSYMS------FQMTGVTHILVGPCSS-K--- 146 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~~~gd--------------~vlv~-~p~~~~~~~~------~~~~g~~~~~~~~~~~-~--- 146 (400)
|++|+|+|+|++.++.++.++|| +|+++ .|+|+++... +...|..++.+ +.++ +
T Consensus 109 i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~ 187 (444)
T 3if2_A 109 IALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEV-THDGEEGFF 187 (444)
T ss_dssp EEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEE-EETTEEEEE
T ss_pred EEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEec-ccccccCcc
Confidence 99999999999999999999988 78775 9999888763 45567788877 7664 2
Q ss_pred CCCCCHHHHHHh---hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--CccccCC
Q 015768 147 TLHPDADWLEKT---LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEG 221 (400)
Q Consensus 147 ~~~~~~e~l~~~---l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~~~~ 221 (400)
++.+|++.|++. +.++ +++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+..... .......
T Consensus 188 ~~~~d~~~l~~~l~~~~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 265 (444)
T 3if2_A 188 KYRVDFEALENLPALKEGR--IGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWD 265 (444)
T ss_dssp EEECCHHHHHTCHHHHTTC--EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCC
T ss_pred ccCCCHHHHHHHHHhcCCC--ceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCC
Confidence 256899999998 4444 49999999999999999999999999999999999999999985432111 1111235
Q ss_pred CcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHH-HHHHHHHHH
Q 015768 222 DHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTE-RVKDLVRNR 298 (400)
Q Consensus 222 ~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~~~~~~~~ 298 (400)
+++++++|+||. +++|+|+||++.+ +++++.+.......+++++++.+.++..+++... ++..+ +.+.+++++
T Consensus 266 ~~~i~~~S~sK~-~~~G~r~G~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 341 (444)
T 3if2_A 266 NNTILCFSLSKI-GLPGMRTGIIVAD---AKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQA 341 (444)
T ss_dssp TTEEEEEESTTT-TCGGGCCEEEECC---HHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHH
T ss_pred CCEEEEechhhc-cCCCCceEEEEEC---HHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHH
Confidence 788999999997 6799999999998 8888888887776677889999999999998643 22223 455667777
Q ss_pred HHHHHHhcc-CCC--CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC----------CCeEEEEec
Q 015768 299 EIIREALSP-LGE--GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----------RGHLRISFG 365 (400)
Q Consensus 299 ~~l~~~L~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----------~~~iRi~~~ 365 (400)
+.+.+.|.+ ++. +.+..+.+++++|+.++....+..+++..| .++||.+.||..|.. ++++||+++
T Consensus 342 ~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~ 420 (444)
T 3if2_A 342 TLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYERL-KAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIA 420 (444)
T ss_dssp HHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHHH-HHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESS
T ss_pred HHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHHH-HHCCeEEecchhhcCCCCCcccccCCCeEEEEEe
Confidence 777777665 332 355667779999999986334788888877 489999999998842 268999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 366 GLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 366 ~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
. +++++++++++|+++++++.++
T Consensus 421 ~-~~e~i~~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 421 A-DEQTLIDGIKVIGEVVRELYDN 443 (444)
T ss_dssp S-CHHHHHHHHHHHHHHHHHHHTC
T ss_pred C-CHHHHHHHHHHHHHHHHHHHcc
Confidence 8 9999999999999999987653
No 65
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=9.5e-42 Score=322.82 Aligned_cols=355 Identities=18% Similarity=0.126 Sum_probs=278.0
Q ss_pred cCchHHHHHHHHHhc--CCCeEEcCCC---CCCCCC--cHHHHHHHHH-hhcCCCCCCCCCCCCcHHHHHHHHHHHHhhc
Q 015768 14 TEMPIMVQIQELVRG--AKNAVSLAQG---VVYWQP--PKMAMEKVKE-LVWDPSISKYGADEGLPELRDALVKKLNQEN 85 (400)
Q Consensus 14 ~~~~~~~~~~~~~~~--~~~~i~~~~~---~~~~~~--~~~v~~a~~~-~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~ 85 (400)
........+.+.+.. .+++++|+.| +++.++ ++.+++++.+ .+.+.....|++..|..++++++++++.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~ 87 (397)
T 3fsl_A 8 YAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGAD 87 (397)
T ss_dssp CCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTT
T ss_pred CCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCC
Confidence 334444455555443 3579999999 455543 4899999999 8876556778888899999999999997665
Q ss_pred CC--CCC--cEEEeCChHHHHHHHH--HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHh
Q 015768 86 KL--YKS--SVMVTAGANQAFVNIV--LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKT 158 (400)
Q Consensus 86 ~~--~~~--~i~~~~g~t~a~~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~ 158 (400)
+. +++ +|++|+|++++++.++ .++.++||+|+++.|+|+++...++..|.+++.+ |.. ++++.+|++.+++.
T Consensus 88 ~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~ 166 (397)
T 3fsl_A 88 HPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTY-PWYDEATNGVRFNDLLAT 166 (397)
T ss_dssp CHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEE-CCEETTTTEECHHHHHHH
T ss_pred cccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEE-eeeeccCCcCcHHHHHHH
Confidence 42 577 8999999999999995 4557899999999999999999999999999999 873 34567899999999
Q ss_pred hccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC-Ccc-----ccCCCcEEEEeccc
Q 015768 159 LETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-KHC-----CVEGDHVVNLFSFS 231 (400)
Q Consensus 159 l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~~-----~~~~~~~i~~~s~s 231 (400)
++.. +..+++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++. ... ....+++++++|+|
T Consensus 167 l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 246 (397)
T 3fsl_A 167 LKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFS 246 (397)
T ss_dssp HTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECT
T ss_pred HHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEeccc
Confidence 9832 2247888889999999999999999999999999999999999999887631 111 12467889999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHH----HhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHH
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLL----KVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREII 301 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l 301 (400)
|.+|++|+|+||++.+...++.++.+. ........+++.+.+.++..++... .++.++++++++++++.+
T Consensus 247 K~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l 326 (397)
T 3fsl_A 247 KIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQEL 326 (397)
T ss_dssp TTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999975221155554432 2222334556788888888888753 356778889999999999
Q ss_pred HHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHH
Q 015768 302 REALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADR 378 (400)
Q Consensus 302 ~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~ 378 (400)
.+.|++++ ++.+..+.+++|+|++++ .+.+ ..+++++||.+.||. |++++..+++++++++++
T Consensus 327 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~l~~~gi~v~~g~--------Ris~~~~~~~~i~~~~~~ 392 (397)
T 3fsl_A 327 VKVLSTEMPERNFDYLLNQRGMFSYTGLS-----AAQV-DRLREEFGVYLIASG--------RMCVAGLNTANVQRVAKA 392 (397)
T ss_dssp HHHHHHHCTTSCCTHHHHCCSSEEECCCC-----HHHH-HHHHHTTCEECCTTC--------EEEGGGCCTTTHHHHHHH
T ss_pred HHHHHhcCCCCCceeecCCceEEEecCCC-----HHHH-HHHHHhCCEEECCCC--------eEEEEecCHhhHHHHHHH
Confidence 99999874 456777777999998875 3344 445568999999874 999987677889999999
Q ss_pred HHHHH
Q 015768 379 LRRGL 383 (400)
Q Consensus 379 l~~~l 383 (400)
|++++
T Consensus 393 l~~~l 397 (397)
T 3fsl_A 393 FAAVM 397 (397)
T ss_dssp HHHHC
T ss_pred HHhhC
Confidence 98763
No 66
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=8.8e-41 Score=309.12 Aligned_cols=323 Identities=22% Similarity=0.300 Sum_probs=264.4
Q ss_pred HhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 26 VRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 26 ~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
.+..+++|+|+.+.+++++++.+++++.+.... ...| +..+..++++++++++ ++++++|++|+|+++++..+
T Consensus 12 ~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~----~~~~~~i~~t~G~~~~l~~~ 84 (337)
T 3p1t_A 12 VRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRY-PFDAEPRVMRKLAEHF----SCPEDNLMLVRGIDECFDRI 84 (337)
T ss_dssp --CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG--TTSC-CTTHHHHHHHHHHHHH----TSCGGGEEEESHHHHHHHHH
T ss_pred ccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh--hccC-CCCchHHHHHHHHHHh----CcCHHHEEEeCCHHHHHHHH
Confidence 456678999999999999999999999998765 4567 4567889999999987 78889999999999999999
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
+.++ +||+|+++.|+|+++...++..|++++.+ |.+++ +.+|++.+++. .+ .+++++++|+||||.++|
T Consensus 85 ~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~--~~--~~~v~i~~p~nptG~~~~--- 153 (337)
T 3p1t_A 85 SAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEI-GLTDD-LLLDPNDLAQV--SR--DDCVVLANPSNPTGQALS--- 153 (337)
T ss_dssp HHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEE-CBCTT-SSBCHHHHTTC--CT--TEEEEEESSCTTTCCCCC---
T ss_pred HHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEe-cCCCC-CCCCHHHHHhh--cC--CCEEEEeCCCCCCCCCCC---
Confidence 9998 89999999999999999999999999999 87654 57899998876 23 489999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP 265 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~ 265 (400)
++++.++|+++++ +|+||+|..+...+.. .....+++++++|+||.+|++|+|+||++.+ +++++.+..... .
T Consensus 154 ~~~l~~l~~~~~~-~ivDea~~~~~~~~~~-~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~ 226 (337)
T 3p1t_A 154 AGELDQLRQRAGK-LLIDETYVDYSSFRAR-GLAYGENELVFRSFSKSYGLAGLRLGALFGP---SELIAAMKRKQW--F 226 (337)
T ss_dssp HHHHHHHHHHCSE-EEEECTTGGGSSCSSS-CCCCBTTEEEEEESSSTTCCTTTCCEEEECC---HHHHHHHHTTSC--T
T ss_pred HHHHHHHHHhCCc-EEEECCChhhcccccc-ccccCCCEEEEeeCchhccCcchheEEEEeC---HHHHHHHHhhcC--C
Confidence 5556666778886 6669999987654422 2233567899999999999899999999998 788888876543 5
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG 345 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 345 (400)
++++.+.+.++..+++. .++..+..+++.++++++.+.|++++. .+..+. +.|+|+..+. ...+...| .++|
T Consensus 227 ~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~----~~~~~~~l-~~~g 298 (337)
T 3p1t_A 227 CNVGTLDLHALEAALDN-DRAREAHIAKTLAQRRRVADALRGLGY-RVASSE-ANFVLVENAA----GERTLRFL-RERG 298 (337)
T ss_dssp TCSCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBCCCS-SSEEEEECTT----THHHHHHH-HHTT
T ss_pred CCCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCcC-EECCCC-CeEEEEEcCC----HHHHHHHH-HHCC
Confidence 67888999999989886 345567777888889999999998854 666666 5677777753 45666655 5889
Q ss_pred eEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 346 VVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 346 i~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
|.+.+|..|+.++++|++++ ++++++++++.|++++
T Consensus 299 i~v~~g~~~~~~~~iRis~~--~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 299 IQVKDAGQFGLHHHIRISIG--REEDNDRLLAALAEYS 334 (337)
T ss_dssp EECEEGGGGTCCSEEEEECC--CHHHHHHHHHHHHHHT
T ss_pred eEEEECccCCCCCeEEEecC--CHHHHHHHHHHHHHHh
Confidence 99999999988899999998 5888888888777654
No 67
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=3.7e-42 Score=336.28 Aligned_cols=348 Identities=18% Similarity=0.237 Sum_probs=282.3
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHHhh-cC-CC---CCcEEEeCChHHHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQE-NK-LY---KSSVMVTAGANQAFVN 104 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~~~~~~a~~l~~~-~~-~~---~~~i~~~~g~t~a~~~ 104 (400)
++++|+.+.++++ ++++++++.+.+... .|. +..|..++++++++++.+. .+ ++ +++|++|+|+|+++..
T Consensus 104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~~---~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~ 179 (533)
T 3f6t_A 104 DAVNYCHTELGLN-RDKVVAEWVNGAVAN---NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVY 179 (533)
T ss_dssp HHHHHHHHTTCCC-HHHHHHHHHHHHHTC---SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHH
T ss_pred hheeccCCCCCcC-CcHHHHHHHHHHHhC---CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHH
Confidence 4788998888885 677777776666542 344 6788999999999999776 34 33 4799999999999999
Q ss_pred HHHH-----hcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC---CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 105 IVLT-----LCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS---SKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 105 ~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
++.+ ++++||+|+++.|+|.++...++..|.+++.+ +.+ ++++.+|++.+++.+.+++ ++|++++|+||
T Consensus 180 ~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~~~d~~~l~~~l~~~~--k~v~l~~p~NP 256 (533)
T 3f6t_A 180 AFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEV-DLHSYEKNDWEIEPNEIEKLKDPSI--KALIVVNPTNP 256 (533)
T ss_dssp HHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEE-CCCEETTTTSEECHHHHHHHSCTTE--EEEEEESSCTT
T ss_pred HHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEE-EecCCcccCCCCCHHHHHHHhCCCC--eEEEEeCCCCC
Confidence 9998 78999999999999999999999999999988 776 3557889999999987654 99999999999
Q ss_pred CccCCCHHHHHHHHHHHH-HcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768 177 SGTYIPERLLKRISDLCK-AAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~-~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
||.+++.+++++|+++|+ +||+++|+||+|+.+.++.........+++++++|+||.+|++|+|+||++.++ +++++
T Consensus 257 tG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--~~~~~ 334 (533)
T 3f6t_A 257 TSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNE--KNVFD 334 (533)
T ss_dssp TCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEES--SCHHH
T ss_pred CccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEECc--HHHHH
Confidence 999999999999999999 689999999999988875444333345788999999999999999999999885 22222
Q ss_pred HH------------------------------------HHhhccCCcCccHHHHHH----HHHHhc------CCcHHHHH
Q 015768 256 QL------------------------------------LKVQDNIPICASIISQHL----ALYSLQ------TGPEWVTE 289 (400)
Q Consensus 256 ~l------------------------------------~~~~~~~~~~~~~~~~~~----~~~~l~------~~~~~~~~ 289 (400)
++ .......+.+++.+.|.+ +..+|. ...++.++
T Consensus 335 ~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~ 414 (533)
T 3f6t_A 335 DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDI 414 (533)
T ss_dssp HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHH
T ss_pred HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHH
Confidence 22 223334455678888887 455664 23477889
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---------------CCCHHHHHHHHHHhcCeEEeCCCcc
Q 015768 290 RVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFEVVRWLAHRHGVVVIPGGAC 354 (400)
Q Consensus 290 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~gi~v~~g~~~ 354 (400)
+++.++++++.+.+.|. ++. .+..+.+++|+|++++.. ..+..+++.++++++||.+.||..|
T Consensus 415 ~~~~~~~r~~~l~~~L~-~~~-~~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f 492 (533)
T 3f6t_A 415 ARKLVSERYDQLHDAMQ-APK-DETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGF 492 (533)
T ss_dssp HHHHHHHHHHHHHHHHT-CCC-CCSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEE
T ss_pred HHHHHHHHHHHHHHhcC-CCc-cccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCccc
Confidence 99999999999999997 654 667788899999988631 0245677778888899999999988
Q ss_pred CC-CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 355 GC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 355 ~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+. ++++||+++..+++++++++++|+++++++.++
T Consensus 493 ~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~~ 528 (533)
T 3f6t_A 493 GAKPGELRVSQANLPTEDYALIGKQVLELLKEYYEE 528 (533)
T ss_dssp CSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 75 689999998778999999999999999987653
No 68
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=4.9e-46 Score=351.67 Aligned_cols=346 Identities=17% Similarity=0.212 Sum_probs=289.7
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~ 107 (400)
+++++|+.+++++++|+++++++.+.+.+. ...|++. ..++++++++++.+.+| +++++|++|+|+++++..++.
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~ 107 (392)
T 3b1d_A 31 PQLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQ 107 (392)
Confidence 389999999999999999999999888653 4556543 78899999999988887 568899999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CC-CCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SK-TLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~-~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
++.++||+|+++.|+|+++...++..|.+++.+ |.+ ++ ++.+|++.+++.++ .+ +++|++++|+||||.+++.+
T Consensus 108 ~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~d~~~l~~~l~~~~--~~~v~~~~~~nptG~~~~~~ 184 (392)
T 3b1d_A 108 AFTKEGEAVLINSPVYPPFARSVRLNNRKLVSN-SLKEENGLFQIDFEQLENDIVEND--VKLYLLCNPHNPGGRVWERE 184 (392)
Confidence 999999999999999999999999999999888 774 33 36689999999887 44 48999999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCCCc---ccc-C--CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH---CCV-E--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 258 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~---~~~-~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~ 258 (400)
++++|+++|++||+++|+||+|..+.+++... ... . .+++++++|+||.+|++|+|+||+++++ +++++.+.
T Consensus 185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--~~~~~~~~ 262 (392)
T 3b1d_A 185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIEN--PTLCAQFK 262 (392)
Confidence 99999999999999999999999988765321 111 1 4678999999999988999999999874 45778777
Q ss_pred HhhccCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEeeCCCCCCCHHHH
Q 015768 259 KVQDNIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 259 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (400)
......++ +++.+.+.++..+|+...+++++.++.+.++++.+.+.|++ ++.+.+..+.+++++|++++....+..++
T Consensus 263 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 342 (392)
T 3b1d_A 263 HQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDAL 342 (392)
Confidence 76654433 56888899888888865577888889999999999999988 66667778887888889987532356678
Q ss_pred HHHHHHhcCeEEeCCCccC--CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 337 VRWLAHRHGVVVIPGGACG--CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
...|++++||.+.||..|+ .++++||+++. +++++++++++|+++++
T Consensus 343 ~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~-~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 343 FTLLHDQAKVILNRGSDYGSEGELHARLNIAA-PKSLVEEICKRIVCCLP 391 (392)
Confidence 8877667899999998886 46799999986 78999999999998875
No 69
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=8.6e-42 Score=324.38 Aligned_cols=360 Identities=15% Similarity=0.105 Sum_probs=273.0
Q ss_pred hHHHHhhhcCchH-HHHHHHHHhc-CCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHH
Q 015768 6 KLAKRALETEMPI-MVQIQELVRG-AKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLN 82 (400)
Q Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~ 82 (400)
+.+.|+.....+. +....++.++ .+++|+|+.|.+ +++.++.+.+++.++.. .....|++..|.+++++++++++.
T Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~-~~~~~y~~~~g~~~lr~~ia~~~~ 93 (409)
T 4eu1_A 15 QTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATL-GTNMDYAPVTGIASFVEEAQKLCF 93 (409)
T ss_dssp ------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCC-CSCCCCCCTTCCHHHHHHHHHHHH
T ss_pred hHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCc-cccccCCCCCCcHHHHHHHHHHHc
Confidence 4566777655443 3333334333 467999999996 88777788888888733 335678888999999999999985
Q ss_pred hhcCC--CCCcEE--EeCChHHHHHHHH---HHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHH
Q 015768 83 QENKL--YKSSVM--VTAGANQAFVNIV---LTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADW 154 (400)
Q Consensus 83 ~~~~~--~~~~i~--~~~g~t~a~~~~~---~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~ 154 (400)
...+. ++++|. .+.++++++..+. .++.++||+|+++.|+|.++...++..|.+++.+ |.+ ++++.+|++.
T Consensus 94 ~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~ 172 (409)
T 4eu1_A 94 GPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPY-SYYDPATKGLNLAG 172 (409)
T ss_dssp CSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEE-CCEETTTTEECHHH
T ss_pred CCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEE-EeecCcCCcCcHHH
Confidence 33221 167784 4899999988764 4456899999999999999999999999999999 873 4567889999
Q ss_pred HHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC-----Ccc--ccCCCcEEE
Q 015768 155 LEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR-----KHC--CVEGDHVVN 226 (400)
Q Consensus 155 l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~--~~~~~~~i~ 226 (400)
+++.++.. ...+++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++. ... ....+++++
T Consensus 173 l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 252 (409)
T 4eu1_A 173 MLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIV 252 (409)
T ss_dssp HHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEE
T ss_pred HHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEE
Confidence 99999732 2246677789999999999999999999999999999999999999887652 111 123467789
Q ss_pred EeccccccCCCcceeEEE--EccCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMGWRVGYI--AYPSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDL 294 (400)
Q Consensus 227 ~~s~sK~~g~~g~~~G~i--~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~ 294 (400)
++|+||.+|++|+|+||+ +..+ ++ +.+.+.........+++.+.+.++..+|+.. .++..++++++
T Consensus 253 ~~S~SK~~g~~G~riG~~~~v~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 330 (409)
T 4eu1_A 253 AQSFSKNFGLYGHRCGALHISTAS--AEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRI 330 (409)
T ss_dssp EEECTTTSSCGGGCCEEEEEECSS--HHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred EecCcccccCccCCceEEEEEeCC--HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 5554 66 6666666554556677889999999999864 23467788899
Q ss_pred HHHHHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHH
Q 015768 295 VRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDD 371 (400)
Q Consensus 295 ~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~ 371 (400)
+++++.+.+.|++++. +.+..+.++++.|+.++ .+++.++++++||.+.||. ||+++..++++
T Consensus 331 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~ll~~~gv~v~p~~--------Ri~~~~~~~~~ 396 (409)
T 4eu1_A 331 AEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLT------REQVELLRSEYHIYMTLNG--------RAAVSGLNSTN 396 (409)
T ss_dssp HHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCC------HHHHHHHHHHHCEECCTTC--------EEEGGGCCTTT
T ss_pred HHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCC------HHHHHHHHHcCCEEEcCCC--------EEEEEecCHhh
Confidence 9999999999998763 46667788999997664 3556777778899999863 99998777888
Q ss_pred HHHHHHHHHHHH
Q 015768 372 CKAAADRLRRGL 383 (400)
Q Consensus 372 ~~~~~~~l~~~l 383 (400)
+++++++|++++
T Consensus 397 i~~~~~~l~~~l 408 (409)
T 4eu1_A 397 VEYVSQAIHNVT 408 (409)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998875
No 70
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=3.1e-41 Score=319.78 Aligned_cols=339 Identities=16% Similarity=0.109 Sum_probs=269.0
Q ss_pred CCeEEcCCCCC-CCC-Cc---HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC--CCCcEEE--eCChHH
Q 015768 30 KNAVSLAQGVV-YWQ-PP---KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL--YKSSVMV--TAGANQ 100 (400)
Q Consensus 30 ~~~i~~~~~~~-~~~-~~---~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~--~~~~i~~--~~g~t~ 100 (400)
++.|+|+.|.+ +.. +| +.+.+++.+.........|.+..|.+++|+++++++.+.+|. ++++|++ |+|+++
T Consensus 28 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~ 107 (401)
T 7aat_A 28 SKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTG 107 (401)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred CCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchH
Confidence 45899999986 553 22 467887777766444677888889999999999999877764 4889977 999999
Q ss_pred HHHHHHHHhc---CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCC-CCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCC
Q 015768 101 AFVNIVLTLC---DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-SKTLHPDADWLEKTLET-KPTPKLVSVVNPGN 175 (400)
Q Consensus 101 a~~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~n 175 (400)
+++.++.++. +|||+|+++.|+|.++...++..|.+++.+ |.+ ++++.+|++.+++.+.. ....+++++++|||
T Consensus 108 al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~N 186 (401)
T 7aat_A 108 SLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAY-RYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHN 186 (401)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCT
T ss_pred HHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEee-eeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 9999887765 899999999999999999999999999999 874 33467899987777763 12248899999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--cc-----ccCCCcEEEEeccccccCCCcceeEEEEccC
Q 015768 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--HC-----CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~~-----~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
|||.+++.+++++|+++|++||+++|+||+|..+.+++.. .. ....+++++++|+||.+|++|+|+||++...
T Consensus 187 PtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~ 266 (401)
T 7aat_A 187 PTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVIC 266 (401)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEe
Confidence 9999999999999999999999999999999988876531 11 1245788999999999999999999987622
Q ss_pred CcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHhccCC---CCcccC
Q 015768 249 EVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLG---EGAVKG 315 (400)
Q Consensus 249 ~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~ 315 (400)
..++ +.+.+.........+++...+.++..++..+ .+++++++++++++++++.+.|++++ .+.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~ 346 (401)
T 7aat_A 267 RDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHIT 346 (401)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceec
Confidence 1145 4455555554455667778888887777653 34567778889999999999998874 246667
Q ss_pred CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 316 GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
|.+++|.|+.++ . +.+..+++++||.+.++ +|++++..+.+++++++++|++++
T Consensus 347 ~~~~~~~~~~~~-----~-~~~~~ll~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 347 DQIGMFCFTGLK-----P-EQVERLTKEFSIYMTKD--------GRISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp HCCSSEEECCCC-----H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHH
T ss_pred CCcceEEecCCC-----H-HHHHHHHHhCCEeccCC--------CeEEeccCChhhHHHHHHHHHHHh
Confidence 888999998764 3 44466777899999865 599998766777999999998875
No 71
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=2.1e-41 Score=325.02 Aligned_cols=362 Identities=16% Similarity=0.151 Sum_probs=281.7
Q ss_pred hhHHHHhhhcCch-HHHHHHHHHhcCCC-eEEcCCCCC-CCCC----cHHHHHHHHHhh--cCCCCCCCCCCCCcHHHHH
Q 015768 5 AKLAKRALETEMP-IMVQIQELVRGAKN-AVSLAQGVV-YWQP----PKMAMEKVKELV--WDPSISKYGADEGLPELRD 75 (400)
Q Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~i~~~~~~~-~~~~----~~~v~~a~~~~~--~~~~~~~y~~~~g~~~~~~ 75 (400)
|+...++...... .+.....+.+++.+ .|+|+.|.+ ++.. .+.+.+++.+.. .......|.+..|.+++++
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~ 101 (448)
T 3meb_A 22 MSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLE 101 (448)
T ss_dssp CCTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHH
T ss_pred hhHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHH
Confidence 3344555554443 34444444455544 799999986 6543 345555554444 2233567888899999999
Q ss_pred HHHHHHHhhcCCC-----CCcEEE--eCChHHHHHH--HHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEecc
Q 015768 76 ALVKKLNQENKLY-----KSSVMV--TAGANQAFVN--IVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGP 142 (400)
Q Consensus 76 ~~a~~l~~~~~~~-----~~~i~~--~~g~t~a~~~--~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~ 142 (400)
++++++. |.. +++|++ |+|+|+|++. .+.++..+||+|++++|+|.++...++ ..|++++.+ |
T Consensus 102 ~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~-~ 177 (448)
T 3meb_A 102 AAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEY-T 177 (448)
T ss_dssp HHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEE-C
T ss_pred HHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEE-e
Confidence 9999984 544 689999 9999999988 455677899999999999999999999 999999999 8
Q ss_pred C-CCC-CCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCC--c-
Q 015768 143 C-SSK-TLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRK--H- 216 (400)
Q Consensus 143 ~-~~~-~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~--~- 216 (400)
. +++ ++.+|++.+++.++..+ ..+++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.. .
T Consensus 178 ~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~ 257 (448)
T 3meb_A 178 YLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAF 257 (448)
T ss_dssp CBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTH
T ss_pred ccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCch
Confidence 7 665 57899999999998421 2477788899999999999999999999999999999999999988876521 1
Q ss_pred --c--ccCCCcEEEEeccccccCCCcceeEEE--Ec--------cCCcH----HHHHHHHHhhccCCcCccHHHHHHHHH
Q 015768 217 --C--CVEGDHVVNLFSFSKAYGMMGWRVGYI--AY--------PSEVE----GFATQLLKVQDNIPICASIISQHLALY 278 (400)
Q Consensus 217 --~--~~~~~~~i~~~s~sK~~g~~g~~~G~i--~~--------~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~ 278 (400)
. ....++++++.|+||.+|++|+|+||+ +. ++ + ++.+.+.........+++.+.+.++..
T Consensus 258 ~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~ 335 (448)
T 3meb_A 258 AVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKN--KALSAAMVSGMTLQIRKTWSMSAIHGAYIVQV 335 (448)
T ss_dssp HHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHH--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred hHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCC--HHHHHHHHHHHHHHHhcccCCccHHHHHHHHH
Confidence 1 123567899999999999999999998 66 43 4 566666665555566788999999999
Q ss_pred HhcCCc------HHHHHHHHHHHHHHHHHHHHhccC--CC------CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 279 SLQTGP------EWVTERVKDLVRNREIIREALSPL--GE------GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 279 ~l~~~~------~~~~~~~~~~~~~~~~l~~~L~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
+|.... +++++++++++++++.+.+.|+++ +. +.+..+.+++|.|+.++ .+++..+++++
T Consensus 336 ~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~ll~~~ 409 (448)
T 3meb_A 336 IVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT------PEHVDYLKEKW 409 (448)
T ss_dssp HHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC------HHHHHHHHHHH
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC------HHHHHHHHHhC
Confidence 988632 346778888999999999999887 33 45666778999998775 35667777789
Q ss_pred CeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 345 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
||.+.||. .|||++..+++++++++++|++++++
T Consensus 410 gV~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 410 SIYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp CEEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred CEEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 99999975 29999876778899999999999884
No 72
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=4.1e-41 Score=320.08 Aligned_cols=360 Identities=16% Similarity=0.148 Sum_probs=284.2
Q ss_pred HHhhhcCchHHHHHHHHHhc--CCCeEEcCCCCC-C----CCCcHHHHHHHHHhhcC-CCCCCCCCCCCcHHHHHHHHHH
Q 015768 9 KRALETEMPIMVQIQELVRG--AKNAVSLAQGVV-Y----WQPPKMAMEKVKELVWD-PSISKYGADEGLPELRDALVKK 80 (400)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~-~----~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~~~~~~a~~ 80 (400)
+|+.....+.+.++.+.... ++++++|+.|.+ + ..+++.+.+++.+.+.+ .....|++..+..+++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 86 (412)
T 1ajs_A 7 AEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRL 86 (412)
T ss_dssp TTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHH
T ss_pred hhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHH
Confidence 44555555666666666553 578999999984 2 24568999999888733 2356788888999999999999
Q ss_pred HHhhcCC--CCCcEEE--eCChHHHHHHHHH--HhcCCC-----CEEEEeCCCccchhHHHHhcCcE-EEEeccCC-CCC
Q 015768 81 LNQENKL--YKSSVMV--TAGANQAFVNIVL--TLCDAG-----DSVVMFAPYYFNSYMSFQMTGVT-HILVGPCS-SKT 147 (400)
Q Consensus 81 l~~~~~~--~~~~i~~--~~g~t~a~~~~~~--~l~~~g-----d~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~-~~~ 147 (400)
+...+++ ++++|++ |+|+++|++.++. .+.++| |+|+++.|+|+++...++..|++ ++.+ |.+ +++
T Consensus 87 ~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~ 165 (412)
T 1ajs_A 87 ALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSY-RYWDTEK 165 (412)
T ss_dssp HHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEE-ECEETTT
T ss_pred HhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEE-eeecCCC
Confidence 9755553 5789999 9999999999965 445789 99999999999999999999999 9988 774 245
Q ss_pred CCCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC---CC--cc--cc
Q 015768 148 LHPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG---RK--HC--CV 219 (400)
Q Consensus 148 ~~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~---~~--~~--~~ 219 (400)
+.+|++.+++.+++. +..+++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++ .. .. ..
T Consensus 166 ~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 245 (412)
T 1ajs_A 166 RGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVS 245 (412)
T ss_dssp TEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred CccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhc
Confidence 678999999998742 223777789999999999999999999999999999999999999888764 21 11 11
Q ss_pred CCCcEEEEeccccccCCCcceeEEEEc---cCCcHH----HHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHH
Q 015768 220 EGDHVVNLFSFSKAYGMMGWRVGYIAY---PSEVEG----FATQLLKVQDNIPICASIISQHLALYSLQTG------PEW 286 (400)
Q Consensus 220 ~~~~~i~~~s~sK~~g~~g~~~G~i~~---~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~ 286 (400)
..++++++.|+||.+|++|+|+||++. + ++ +++.+.........+++.+.+.++..+|+.. .++
T Consensus 246 ~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 322 (412)
T 1ajs_A 246 EGFELFCAQSFSKNFGLYNERVGNLTVVAKE---PDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGN 322 (412)
T ss_dssp TTCCEEEEEECTTTSCCGGGCEEEEEEECSS---HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHH
T ss_pred cCCcEEEEEecccccCCCCcceEEEEEecCC---HHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHH
Confidence 357789999999999978999999998 5 55 4444544333333346889999999999864 246
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEE
Q 015768 287 VTERVKDLVRNREIIREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRIS 363 (400)
Q Consensus 287 ~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~ 363 (400)
.++..++++++++++.+.|++++ .+.+..+.+++++|+.++ .+++..+++++||.+.|+ +|++
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gv~v~~~--------~Ris 388 (412)
T 1ajs_A 323 VKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN------PKQVEYLINQKHIYLLPS--------GRIN 388 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC------HHHHHHHHHTTCEECCTT--------SEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC------HHHHHHHHHhCCEEecCC--------cEEE
Confidence 77888899999999999999876 356666777899998764 345556667899999874 5999
Q ss_pred eccCCHHHHHHHHHHHHHHHHHH
Q 015768 364 FGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 364 ~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
++..+++++++++++|+++++++
T Consensus 389 ~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 389 MCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp GGGCCTTTHHHHHHHHHHHHHHC
T ss_pred eeeCCHHHHHHHHHHHHHHHHhc
Confidence 99668999999999999998753
No 73
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=5e-41 Score=312.49 Aligned_cols=325 Identities=19% Similarity=0.242 Sum_probs=261.6
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
+++++++|+.+.+++++++++++++.+.+.. ...|+...+ .++++++++++ ++++++|++|+|+++++..++.
T Consensus 13 ~g~~~id~~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~----~~~~~~i~~t~g~~~al~~~~~ 85 (350)
T 3fkd_A 13 LSSEIVNFSTTVWTDGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRN----SVDNNAILVTNGPTAAFYQIAQ 85 (350)
T ss_dssp ---CCEECSCCSCCCSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHT----TCCGGGEEEESHHHHHHHHHHH
T ss_pred ccccEEEccCCCCCCCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHh----CcCHHHEEEcCCHHHHHHHHHH
Confidence 4589999999999999999999999988843 566765555 78898888887 7888999999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC-CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
++. ||+|+++.|+|.++...++..|++++.+ |. ++.+ .+++ ++ +++|++++|+||||.++|.+++
T Consensus 86 ~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v-~~~~~~~-~~~~--------~~--~~~v~i~~p~nptG~~~~~~~l 151 (350)
T 3fkd_A 86 AFR--GSRSLIAIPSFAEYEDACRMYEHEVCFY-PSNEDIG-EADF--------SN--MDFCWLCNPNNPDGRLLQRTEI 151 (350)
T ss_dssp HTT--TCEEEEEESCCHHHHHHHHHTTCEEEEE-ETTSCGG-GSCC--------TT--CSEEEEESSCTTTCCCCCHHHH
T ss_pred HHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEE-ecCCccc-cCcc--------CC--CCEEEEeCCCCCcCCCCCHHHH
Confidence 998 9999999999999999999999999999 87 5422 2232 23 4999999999999999998888
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCc--cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~ 264 (400)
.+|++.|+++ ++|+||+|..+.+.+... .....+++++++|+||.+|++|+|+||++.+ +++++.+.....
T Consensus 152 ~~l~~~~~~~--~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~---~~~~~~~~~~~~-- 224 (350)
T 3fkd_A 152 LRLLNDHPDT--TFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN---KDFMKRVAAFST-- 224 (350)
T ss_dssp HHHHHHCTTS--EEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC---HHHHHHHHTTCC--
T ss_pred HHHHHhCCCC--EEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeC---HHHHHHHHHhCC--
Confidence 8888877654 999999999887765432 1224578899999999999899999999997 899998887664
Q ss_pred CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
+++++.+.+.++..+|+...++.++..+. .++++++.+.|++++++.+.++. ++|+|+.++.. +..++..+|.+++
T Consensus 225 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~L~~~~ 300 (350)
T 3fkd_A 225 PWAVNALAIEAAKFILIHPAQFTLPIRKW-QRNTVDFITALNRLDGVEVHPSG-TTFFLLRLKKG--TAAELKKYMLEEY 300 (350)
T ss_dssp TTCSCHHHHHHHHHHHHCTTTTCCCHHHH-HHHHHHHHHHHHHSTTEEECCCS-SSEEEEEESSS--CHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHhCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEECCCC-CcEEEEECCCC--CHHHHHHHHHHHC
Confidence 56789999999999998754344343333 38889999999888665666554 77888888764 6888999887549
Q ss_pred CeEEeCCCccCC--CCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACGC--RGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 345 gi~v~~g~~~~~--~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
||.+.||..|+. ++++||+++ +.++++++++.|++.+++.
T Consensus 301 gi~v~~g~~f~~~~~~~iRis~~--~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 301 NMLIRDASNFRGLDESYVRITTQ--RPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp CEECEECTTSTTCCTTEEEEECC--CHHHHHHHHHHHHHHHTC-
T ss_pred CEEEEeCccCCCCCCCEEEEEcC--CHHHHHHHHHHHHHHHHHh
Confidence 999999998864 789999998 4777777777777666543
No 74
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=6.9e-40 Score=307.04 Aligned_cols=328 Identities=21% Similarity=0.293 Sum_probs=269.6
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHHHHHHHH
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENK--LYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a~~~~~~ 107 (400)
.|+|+.+.+++++++++++++.+.+.+. ....|+...+ .++++++++++.+.+| +++++|++|+|++++++.++.
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~ 110 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQ 110 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHH
Confidence 4999999998889999999998887642 1456755545 7999999999988765 457899999999999999999
Q ss_pred HhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 108 TLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 108 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
++.++||+|+++.|+|+++...++..|.+++.+ |.++ ++.+|++.+++.+++ ++ ++|++++|+||||.++|.
T Consensus 111 ~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v-~~~~-~~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~~--- 183 (369)
T 3cq5_A 111 AFGGPGRTALGFQPSYSMHPILAKGTHTEFIAV-SRGA-DFRIDMDVALEEIRAKQP--DIVFVTTPNNPTGDVTSL--- 183 (369)
T ss_dssp HHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEE-ECCT-TSSCCHHHHHHHHHHHCC--SEEEEESSCTTTCCCCCH---
T ss_pred HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEe-cCCc-CCCCCHHHHHHHhhccCC--CEEEEeCCCCCCCCCCCH---
Confidence 999999999999999999999999999999999 7664 356899999999876 54 899999999999999995
Q ss_pred HHHHHHHHHcCCEEEEcccccccccCCCCccc-cCCC-cEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768 187 KRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC-VEGD-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~-~~~~-~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~ 264 (400)
+++.++|+.+++++|+||+|+.+..+...... ...+ ++++++|+||++|++|+|+||++.+ +++++.+.....
T Consensus 184 ~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~---~~~~~~l~~~~~-- 258 (369)
T 3cq5_A 184 DDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVAN---PAFIDAVMLVRL-- 258 (369)
T ss_dssp HHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEEC---THHHHHHHTTSC--
T ss_pred HHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeC---HHHHHHHHHcCC--
Confidence 55555555667999999999988754221111 2235 7899999999998899999999998 678888876554
Q ss_pred CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhc
Q 015768 265 PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRH 344 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 344 (400)
+++++.+.+.++..+++. .+++++..++++++++++.+.|++.+ +.+.++ .++|+|++++ .+..++..+|. ++
T Consensus 259 ~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~~~~---~~~~~l~~~l~-~~ 331 (369)
T 3cq5_A 259 PYHLSALSQAAAIVALRH-SADTLGTVEKLSVERVRVAARLEELG-YAVVPS-ESNFVFFGDF---SDQHAAWQAFL-DR 331 (369)
T ss_dssp TTCSCHHHHHHHHHHHHT-HHHHHTHHHHHHHHHHHHHHHHHHHT-CEEECC-SSSEEEEECC---SSHHHHHHHHH-HT
T ss_pred CCCCCHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCC-CEECCC-CCeEEEEECC---CCHHHHHHHHH-HC
Confidence 567899999999999986 46778888899999999999998865 355544 4778898887 25778888775 89
Q ss_pred CeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 345 GVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 345 gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
||.+.+| +.++++|++++ +++++++++++|+++++
T Consensus 332 gi~v~~~---~~~~~iRis~~--~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 332 GVLIRDV---GIAGHLRTTIG--VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp TEECBCC---SCTTEEEEECC--CHHHHHHHHHHHHHHHT
T ss_pred CEEEEEC---CCCCeEEEEeC--CHHHHHHHHHHHHHHHh
Confidence 9999998 24689999998 68999999999988764
No 75
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=2.9e-41 Score=319.33 Aligned_cols=338 Identities=16% Similarity=0.143 Sum_probs=266.7
Q ss_pred CCCeEEcCCCC---CCC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC--CCCCcEEE--eCChH
Q 015768 29 AKNAVSLAQGV---VYW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENK--LYKSSVMV--TAGAN 99 (400)
Q Consensus 29 ~~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~--~~~~~i~~--~~g~t 99 (400)
++++|+|+.|. +.. ++++.+.+++.+.+.+.....|++..+..++++++++++.+..+ +++++|++ |+|++
T Consensus 25 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~ 104 (396)
T 2q7w_A 25 RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT 104 (396)
T ss_dssp ---CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccch
Confidence 46899999998 333 46789999998877544456788888999999999999965544 34789998 99999
Q ss_pred HHHHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCC-CCeEEEEeCCCC
Q 015768 100 QAFVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKP-TPKLVSVVNPGN 175 (400)
Q Consensus 100 ~a~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~n 175 (400)
+|++.++.++. ++||+|+++.|+|+++...++..|.+++.+ |.++ +++.+|++.+++.++..+ ..+++++++|+|
T Consensus 105 ~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~n 183 (396)
T 2q7w_A 105 GALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREY-AYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHN 183 (396)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEE-ECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCT
T ss_pred hhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEE-ecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 99999998764 699999999999999999999999999999 7742 345789999999987532 247788899999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC--C--Ccc--ccCCCcEEEEeccccccCCCcceeEEEEc--c
Q 015768 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--R--KHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAY--P 247 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~--~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~--~ 247 (400)
|||.+++.+++++|+++|++||+++|+||+|..+.+++ . ... ....+++++++|+||.+|++|+|+||++. +
T Consensus 184 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~ 263 (396)
T 2q7w_A 184 PTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAA 263 (396)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcC
Confidence 99999999999999999999999999999999887753 1 111 11246789999999999989999999986 3
Q ss_pred CCcH----HHHHHHHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHHHHHHhccCC---CCccc
Q 015768 248 SEVE----GFATQLLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREIIREALSPLG---EGAVK 314 (400)
Q Consensus 248 ~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~ 314 (400)
+ + ++.+.+.........+++.+.+.++..+|+.. .++.++..+.++++++.+.+.|++++ .+.+.
T Consensus 264 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 341 (396)
T 2q7w_A 264 D--SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI 341 (396)
T ss_dssp S--HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHH
T ss_pred C--HHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee
Confidence 2 4 34455544333334456889999999999864 25677788889999999999999886 35666
Q ss_pred CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
.+.+++++|+.++ . +.+..+++++||.+.|| +||+++..+++++++++++|++++
T Consensus 342 ~~~~~~~~~~~~~-----~-~~~~~~l~~~gv~v~~~--------~Ris~~~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 342 IKQNGMFSFSGLT-----K-EQVLRLREEFGVYAVAS--------GRVNVAGMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp HHCCSSEEECCCC-----H-HHHHHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHHHHHHHC
T ss_pred cCCCceEEEecCC-----H-HHHHHHHHhcCeeecCC--------ceEEEeecCHHHHHHHHHHHHhcC
Confidence 7777899998764 2 34445666899999874 599998668999999999998763
No 76
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=4.4e-41 Score=328.65 Aligned_cols=361 Identities=18% Similarity=0.261 Sum_probs=276.4
Q ss_pred hHHHHHHHHHhcCC--C-------eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHH-HhhcC
Q 015768 17 PIMVQIQELVRGAK--N-------AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKL-NQENK 86 (400)
Q Consensus 17 ~~~~~~~~~~~~~~--~-------~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l-~~~~~ 86 (400)
-.+.++.++++..+ + .++|+.+.+.+ +++.+++++.+.+. ...|+++.|...+++++++++ .+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~~-~~~~~~~al~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~~~ 157 (546)
T 2zy4_A 82 GIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLGL-DPAAFLHEMVDGIL---GCNYPVPPRMLNISEKIVRQYIIREMG 157 (546)
T ss_dssp THHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSCC-CHHHHHHHHHHHHH---TCSCCSSSSCCHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHhcCCCCcchhHHhhhecccCCCCC-CChHHHHHHHHhhh---cCCCCCCcCCHHHHHHHHHHHHHHhcc
Confidence 44666666654432 2 78898888877 45677777777664 246988888999999987765 44433
Q ss_pred --C---CCCcEEEeCChHHHHHHHHHH-----hcCCCCEEEEeCCCccchhHHHHh--cCcEEEEeccCCCC-CCCCCHH
Q 015768 87 --L---YKSSVMVTAGANQAFVNIVLT-----LCDAGDSVVMFAPYYFNSYMSFQM--TGVTHILVGPCSSK-TLHPDAD 153 (400)
Q Consensus 87 --~---~~~~i~~~~g~t~a~~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~--~g~~~~~~~~~~~~-~~~~~~e 153 (400)
. ++++|++|+|+++++..++.+ +.++||+|++++|+|+++...... .|++++.+ |.+++ ++.+|++
T Consensus 158 ~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~ 236 (546)
T 2zy4_A 158 ADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAI-NADPSLNWQYPDS 236 (546)
T ss_dssp CTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEE-ECBGGGTTBCCHH
T ss_pred CCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEE-ecCcccCCCCCHH
Confidence 2 358999999999999999988 578999999999999999987544 46888888 77654 4778999
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHH--HHcCCEEEEcccccccccCCCCccccCCCcEEEEeccc
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLC--KAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS 231 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~--~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s 231 (400)
.+++.+..+ +++|++++|+||||.+++.+++++|+++| +++|+++|+||+|+.+.++.........+++++++|+|
T Consensus 237 ~l~~~~~~~--~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~S 314 (546)
T 2zy4_A 237 ELDKLKDPA--IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFS 314 (546)
T ss_dssp HHGGGGSTT--EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEEST
T ss_pred HHHHhhCCC--CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCc
Confidence 999887554 49999999999999999999999999999 78999999999999887543222222346899999999
Q ss_pred cccCCCcceeEEEEccCCcHHHHHHHHHh-------------h-----------------------ccCCcCccHHHHHH
Q 015768 232 KAYGMMGWRVGYIAYPSEVEGFATQLLKV-------------Q-----------------------DNIPICASIISQHL 275 (400)
Q Consensus 232 K~~g~~g~~~G~i~~~~~~~~~~~~l~~~-------------~-----------------------~~~~~~~~~~~~~~ 275 (400)
|.+|++|+|+||+++++ +++++++... . ...+.+.+.+.|.+
T Consensus 315 K~~g~~GlRiG~~~~~~--~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a 392 (546)
T 2zy4_A 315 KYFGATGWRLGVVAAHQ--QNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQ 392 (546)
T ss_dssp TTTTCGGGCEEEEEEES--SCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHH
T ss_pred cccCCCCcceEEEEECC--HHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHH
Confidence 99999999999999884 2355555221 0 01223567777776
Q ss_pred H-----HHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC---------------CCCHHH
Q 015768 276 A-----LYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK---------------HLDDFE 335 (400)
Q Consensus 276 ~-----~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 335 (400)
+ ..+++.+..+..+.++.++++++.+.+.|. .+. .+..+.+++|+|++++.. ..+..+
T Consensus 393 ~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~~-~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~ 470 (546)
T 2zy4_A 393 MALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-MPP-LRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGD 470 (546)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SSC-CCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-CCc-ccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHH
Confidence 4 344555567888888999999999999996 443 455677889999987521 012345
Q ss_pred HHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 336 VVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++.+++.++||.+.||..|+. ++++||+++..+++++++++++|+++++++.+
T Consensus 471 ~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~ 524 (546)
T 2zy4_A 471 MLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELYA 524 (546)
T ss_dssp HHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 455666789999999999974 57899999876899999999999999988763
No 77
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=2.8e-40 Score=312.37 Aligned_cols=353 Identities=14% Similarity=0.118 Sum_probs=272.1
Q ss_pred hhcCchHHHHHHHHHh--cCCCeEEcCCCCC---CC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh
Q 015768 12 LETEMPIMVQIQELVR--GAKNAVSLAQGVV---YW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE 84 (400)
Q Consensus 12 ~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~---~~--~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~ 84 (400)
.....+....+.+.+. .++++++|+.|.+ .. ++++.+.+++.+.+.++....|++..+..++++++++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~ 85 (394)
T 2ay1_A 6 KPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD 85 (394)
T ss_dssp CCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG
T ss_pred ccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC
Confidence 3333333344444333 3578999999983 22 567899999988775444567877788999999999998533
Q ss_pred cCCCCCcEEE--eCChHHHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHHhh
Q 015768 85 NKLYKSSVMV--TAGANQAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEKTL 159 (400)
Q Consensus 85 ~~~~~~~i~~--~~g~t~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l 159 (400)
++++++|++ |+|+++|++.++.++.. +||+|+++.|+|+++...++..|.+++.+ |.++ +++.+|++.+++.+
T Consensus 86 -~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~d~~~l~~~l 163 (394)
T 2ay1_A 86 -GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTY-RYFDAETRGVDFEGMKADL 163 (394)
T ss_dssp -GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEE-ECEETTTTEECHHHHHHHH
T ss_pred -CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEE-ecccccCCccCHHHHHHHH
Confidence 336789999 99999999999988764 99999999999999999999999999988 7742 34568999999998
Q ss_pred ccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC--C--Ccc-c-cCCCcEEEEecccc
Q 015768 160 ETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--R--KHC-C-VEGDHVVNLFSFSK 232 (400)
Q Consensus 160 ~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~--~~~-~-~~~~~~i~~~s~sK 232 (400)
+..+ ..+++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++ . ... . ...+++++++|+||
T Consensus 164 ~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 243 (394)
T 2ay1_A 164 AAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSK 243 (394)
T ss_dssp HTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTT
T ss_pred HhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccC
Confidence 7532 23667778999999999999999999999999999999999999887653 1 111 1 12457899999999
Q ss_pred ccCCCcceeEEEEc--cCCcHHHHHH----HHHhhccCCcCccHHHHHHHHHHhcCC------cHHHHHHHHHHHHHHHH
Q 015768 233 AYGMMGWRVGYIAY--PSEVEGFATQ----LLKVQDNIPICASIISQHLALYSLQTG------PEWVTERVKDLVRNREI 300 (400)
Q Consensus 233 ~~g~~g~~~G~i~~--~~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~ 300 (400)
.+|++|+|+||++. ++ +++++. +.........+++.+.+.++..+|+.. .++.+++.+++++++++
T Consensus 244 ~~~~~G~riG~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T 2ay1_A 244 NFGIYRERTGCLLALCAD--AATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQ 321 (394)
T ss_dssp TTTCGGGCEEEEEEECSS--HHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcCCccceEEEEeCC--HHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99989999999987 33 554433 332222333445889999999999864 24677888899999999
Q ss_pred HHHHhccCC---CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHH
Q 015768 301 IREALSPLG---EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAAD 377 (400)
Q Consensus 301 l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~ 377 (400)
+.+.|++++ .+.+..+.+++|+|+.++ .+.+ ..+++++||.+.+| +||+++.+++++++++++
T Consensus 322 l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~-~~~l~~~gi~v~~~--------~Ris~~~~~~~~i~~~~~ 387 (394)
T 2ay1_A 322 LAGELRDLSGSDRFGFVAEHRGMFSRLGAT-----PEQV-KRIKEEFGIYMVGD--------SRINIAGLNDNTIPILAR 387 (394)
T ss_dssp HHHHHHHHHTSSTTTHHHHCCSSEEECCCC-----HHHH-HHHHHHHCEECCTT--------CEEEGGGCCTTTHHHHHH
T ss_pred HHHHHHhcCCCCCeeEEcCCceEEEeeCCC-----HHHH-HHHHHhCCEEecCC--------CeEEeecCCHhhHHHHHH
Confidence 999998875 356666777899998775 3344 45556899999875 599998778999999999
Q ss_pred HHHHH
Q 015768 378 RLRRG 382 (400)
Q Consensus 378 ~l~~~ 382 (400)
+|+++
T Consensus 388 ~l~~~ 392 (394)
T 2ay1_A 388 AIIEV 392 (394)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99875
No 78
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=1.2e-39 Score=301.25 Aligned_cols=316 Identities=22% Similarity=0.299 Sum_probs=257.3
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
+++++|+.+.+++++|+++++++.+.+.+.....|+. .+..++++++++++.+. .+++++|++|+|+++++..++.++
T Consensus 19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~-~~~~~~v~~~~G~~~al~~~~~~~ 96 (335)
T 1uu1_A 19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD-FLSKNNVSVGNGADEIIYVMMLMF 96 (335)
T ss_dssp CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS-SCCGGGEEEESSHHHHHHHHHHHS
T ss_pred CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC-CCCHHHEEEcCChHHHHHHHHHHh
Confidence 4689999999988889999999999874333556743 46899999999998533 367899999999999999999999
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
||+|+++ |+|+++...++..|++++.+ |.+++ +.+|++.+ ++ +++|++++|+||||.++|.+++.+|
T Consensus 97 ---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l-----~~--~~~v~l~~p~nptG~~~~~~~l~~l 163 (335)
T 1uu1_A 97 ---DRSVFFP-PTYSCYRIFAKAVGAKFLEV-PLTKD-LRIPEVNV-----GE--GDVVFIPNPNNPTGHVFEREEIERI 163 (335)
T ss_dssp ---SEEEECS-SSCHHHHHHHHHHTCEEEEC-CCCTT-SCCCCCCC-----CT--TEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred ---CCcEEEC-CCcHHHHHHHHHcCCeEEEe-ccCCC-CCCCHHHc-----CC--CCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 8999999 99999999999999999999 87644 45677665 33 4999999999999999998888777
Q ss_pred HHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCcc
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICAS 269 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~ 269 (400)
+++| | ++|+||+|+.+............+++++++|+||.+|++|+|+||++.+ +++++.+..... +++++
T Consensus 164 ~~~~---~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~---~~~~~~l~~~~~--~~~~~ 234 (335)
T 1uu1_A 164 LKTG---A-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS---EKFIDAYNRVRL--PFNVS 234 (335)
T ss_dssp HHTT---C-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC---HHHHHHHHHHSC--TTCSC
T ss_pred HHhC---C-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC---HHHHHHHHHhcC--CCCcC
Confidence 7766 7 8999999998764311111223567899999999999899999999997 788888877654 46889
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe
Q 015768 270 IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI 349 (400)
Q Consensus 270 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 349 (400)
.+.+.++..+|+. .++.++..++++++++++.+.|++++. .+.+ .+++|+|++++. .+..++...|. ++||.+.
T Consensus 235 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~-~~~~~~~~~~~~--~~~~~~~~~l~-~~gi~v~ 308 (335)
T 1uu1_A 235 YVSQMFAKVALDH-REIFEERTKFIVEERERMKSALREMGY-RITD-SRGNFVFVFMEK--EEKERLLEHLR-TKNVAVR 308 (335)
T ss_dssp HHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHTC-CBCC-CCSSEEEEECCT--HHHHHHHHHHH-HHTEEEE
T ss_pred HHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHCCc-EEcC-CCCeEEEEECCC--CCHHHHHHHHH-HCCEEEE
Confidence 9999999999986 467888889999999999999988753 5544 447889999875 24667888776 6899999
Q ss_pred CCCccCCCCeEEEEeccCCHHHHHHHHHHHHHH
Q 015768 350 PGGACGCRGHLRISFGGLVEDDCKAAADRLRRG 382 (400)
Q Consensus 350 ~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~ 382 (400)
+ .++++|++++. .+++++++++|+++
T Consensus 309 ~-----~~~~iRis~~~--~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 309 S-----FREGVRITIGK--REENDMILRELEVF 334 (335)
T ss_dssp E-----ETTEEEEECCC--HHHHHHHHHHHHCC
T ss_pred E-----CCCeEEEEeCC--HHHHHHHHHHHHhh
Confidence 8 36799999974 67888888888753
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1.1e-40 Score=314.33 Aligned_cols=327 Identities=20% Similarity=0.179 Sum_probs=254.3
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhh--cC-CCCCCCCCCCCc-----HHHHHHHHHHHHhhcCC--CC-CcEEEeC
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELV--WD-PSISKYGADEGL-----PELRDALVKKLNQENKL--YK-SSVMVTA 96 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~--~~-~~~~~y~~~~g~-----~~~~~~~a~~l~~~~~~--~~-~~i~~~~ 96 (400)
.++++|+|+.|.++++.|+.+.+++.+.. .. .....|++..|. +++|+++++++.. +|+ .+ ++|++|+
T Consensus 20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~-~g~~~~~~~~i~~t~ 98 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGV-VGNAATEDRYIVVGT 98 (391)
T ss_dssp TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHH-HCSBCCSSSEEEEEE
T ss_pred CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEeC
Confidence 46789999999998876666666553333 21 135679888888 9999999999874 453 34 6999999
Q ss_pred ChHHHHHHHHHHhcCCCC----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC
Q 015768 97 GANQAFVNIVLTLCDAGD----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 97 g~t~a~~~~~~~l~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~ 172 (400)
|+++++..++.++.++|| +|+++.|+|+++...++..|++++.+ +.+.+++. .++ +++|++++
T Consensus 99 G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~----------~~~--~k~v~l~~ 165 (391)
T 3bwn_A 99 GSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKW-EGDAWGFD----------KKG--PYIELVTS 165 (391)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEE-EEESTTCC----------CCS--CEEEEEES
T ss_pred ChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEe-cCCHHHcC----------CCC--CEEEEECC
Confidence 999999999999999999 99999999999999999999998888 77655432 123 49999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEc-cCCcH
Q 015768 173 PGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAY-PSEVE 251 (400)
Q Consensus 173 p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~-~~~~~ 251 (400)
||||||.+++ +|++.++.+++++|+||+|.. ..........+++++++|+||.+|++|+|+||++. + +
T Consensus 166 p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~~~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~---~ 234 (391)
T 3bwn_A 166 PNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---PHYTPITRRQDHDIMLFTFSKITGHAGSRIGWALVKD---K 234 (391)
T ss_dssp SCTTTCCCCC-----CCC-----CCCEEEEECTTCS---TTTSCCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECC---H
T ss_pred CCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---CCCCccccCCCCeEEEEechhhcCCCccceEEEEecC---H
Confidence 9999999997 344422223399999999983 11111111356889999999999999999999997 6 7
Q ss_pred HHHHHHHHhhccCCcCccHHHHHHHHHHhcCC----------cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-----
Q 015768 252 GFATQLLKVQDNIPICASIISQHLALYSLQTG----------PEWVTERVKDLVRNREIIREALSPLGEGAVKGG----- 316 (400)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----- 316 (400)
++++.+........++++.+.|.++..+|+.+ .++++++++.++++++.+.+.|++++++.+..|
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~ 314 (391)
T 3bwn_A 235 EVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFC 314 (391)
T ss_dssp HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEE
T ss_pred HHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccc
Confidence 88888888776556788999999999999863 457888899999999999999998754444332
Q ss_pred --------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 317 --------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 317 --------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.+++|+|++++.. +. +.++++++||.+.||..|+. ++++|||++. +++++++++++|++++++
T Consensus 315 ~f~~~~~~~~g~~~~~~~~~~----~~-~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~-~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 315 NYFGKSLESYPAFAWLGTKEE----TD-LVSELRRHKVMSRAGERCGSDKKHVRVSMLS-REDVFNVFLERLANMKLI 386 (391)
T ss_dssp TTTTEEECCCCSEEEEEESSS----CC-HHHHHHHTTEECEEGGGGTCCTTEEEEESCS-CHHHHHHHHHHHHSCC--
T ss_pred ccccccCCCcceEEEecCCcH----HH-HHHHHHHCCEEEccCCCCCCCCCEEEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 3456899998741 23 33455689999999999975 7899999996 899999999999887654
No 80
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=1.9e-38 Score=300.27 Aligned_cols=336 Identities=13% Similarity=0.105 Sum_probs=266.8
Q ss_pred cCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCC--CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWDP--SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+++++++|+.+++ ++++++.+++++.+.+.+. ....|....|..++++++++++++.+|. +++++|+|+++++..
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~v~~~~ggt~a~~~ 118 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK--EAAILFSTGFQSNLG 118 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--CcEEEECCHHHHHHH
Confidence 4677999999987 6667899999998887542 1334556677888999999999988885 689999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCCCccCCC
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~nptG~~~~ 182 (400)
++.++.++||.|+++.|+|+++...++..|.+++.+ |. +|++++++.++... .+++|++++|+||||.+.+
T Consensus 119 ~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v-~~------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 191 (398)
T 3a2b_A 119 PLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKY-GH------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN 191 (398)
T ss_dssp HHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEE-CT------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC
T ss_pred HHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEe-CC------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC
Confidence 999999999999999999999999999999999988 65 47899999987521 3599999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc---C-CCc-EEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV---E-GDH-VVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~---~-~~~-~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
+++|.++|++||+++|+||+|+.+.++....... . .++ +++++|+||++|++| ||++.+ +++++.+
T Consensus 192 ---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~---~~~~~~l 262 (398)
T 3a2b_A 192 ---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD---ADVIDFL 262 (398)
T ss_dssp ---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC---HHHHHHH
T ss_pred ---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC---HHHHHHH
Confidence 8999999999999999999998776542111111 1 123 799999999998667 999998 7888888
Q ss_pred HHh-hccCCcCccHHHHH-HHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768 258 LKV-QDNIPICASIISQH-LALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 335 (400)
Q Consensus 258 ~~~-~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (400)
... ......+.+.+.+. ++..+|+. .++.++++++++++++++.+.|++++ +.+..+. ++++|+.++.. .+..+
T Consensus 263 ~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-g~~~~~~~~~~-~~~~~ 338 (398)
T 3a2b_A 263 KHNARSVMFSASMTPASVASTLKALEI-IQNEPEHIEKLWKNTDYAKAQLLDHG-FDLGATE-SPILPIFIRSN-EKTFW 338 (398)
T ss_dssp HHHCHHHHSSBCCCHHHHHHHHHHHHH-HHHCTHHHHHHHHHHHHHHHHHHHTT-CCBCSCC-SSEEEEECCCH-HHHHH
T ss_pred HHhcccceecCCCCHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHhcC-CCcCCCC-CCEEEEEcCCH-HHHHH
Confidence 764 22222233344444 55577764 34456778889999999999999884 4666665 78999998742 24667
Q ss_pred HHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 336 VVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
+..+|. ++||.+.+|..|. .++++|++++. ++++++++++++|+++++++
T Consensus 339 l~~~l~-~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 339 VTKMLQ-DDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp HHHHHH-HTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHH-HCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 888886 5699999998775 35799999997 79999999999999998765
No 81
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=6.1e-38 Score=295.48 Aligned_cols=368 Identities=14% Similarity=0.140 Sum_probs=270.5
Q ss_pred hhHHHHhhhc---CchHHHHHHHHH-hcCCCeEEcCCCC---CCC--CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHH
Q 015768 5 AKLAKRALET---EMPIMVQIQELV-RGAKNAVSLAQGV---VYW--QPPKMAMEKVKELVWDPSISKYGADEGLPELRD 75 (400)
Q Consensus 5 ~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~i~~~~~~---~~~--~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~ 75 (400)
|+.++|.... .......+.+.| ++..+.|||+.|. ... +..+.|.+|..+..+.+....|.+..|.+++|+
T Consensus 15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~ 94 (420)
T 4h51_A 15 MTTAERWQKIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFID 94 (420)
T ss_dssp CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHH
T ss_pred hhhhHHHhCCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHH
Confidence 5577776643 344444555544 5566799999993 222 234778888877777665667999999999999
Q ss_pred HHHHHHHhhcCCCCCc--EEEeCChHHHHHHHHHHh----cCCCCEEEEeCCCccchhHHHHhcCcEEE-EeccCCCCCC
Q 015768 76 ALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNSYMSFQMTGVTHI-LVGPCSSKTL 148 (400)
Q Consensus 76 ~~a~~l~~~~~~~~~~--i~~~~g~t~a~~~~~~~l----~~~gd~vlv~~p~~~~~~~~~~~~g~~~~-~~~~~~~~~~ 148 (400)
++++++.... .+.+. .+-|.|+|.|+..++..+ .+|||+|++++|+|+++..+++..|.+.+ .+...+++++
T Consensus 95 aia~~~~g~~-~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~ 173 (420)
T 4h51_A 95 EAVKIIYGNT-VELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV 173 (420)
T ss_dssp HHHHHHHC----CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred HHHHHhcCCC-ccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence 9999875332 22233 344788888887776655 47999999999999999999999998743 3312334456
Q ss_pred CCCHHHHHHhhccC-CCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-------ccC
Q 015768 149 HPDADWLEKTLETK-PTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-------CVE 220 (400)
Q Consensus 149 ~~~~e~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-------~~~ 220 (400)
.+|.+.+.+.+... +..+++++.+||||||.+++.+++++|+++|+++++++|+|++|.+|.+++.... ...
T Consensus 174 ~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~ 253 (420)
T 4h51_A 174 SLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR 253 (420)
T ss_dssp EECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred CCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh
Confidence 67888888877622 2236666678999999999999999999999999999999999999988653221 123
Q ss_pred CCcEEEEeccccccCCCcceeEEEEccCCcHHHH----HHHHHhhccCCcCccHHHHHHHHHHhcCCc------HHHHHH
Q 015768 221 GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA----TQLLKVQDNIPICASIISQHLALYSLQTGP------EWVTER 290 (400)
Q Consensus 221 ~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~ 290 (400)
.+..+++.||||.++++|+|+||++.+....+.. ..+.........+++...+.++...+.+.. +.++.+
T Consensus 254 ~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m 333 (420)
T 4h51_A 254 GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAM 333 (420)
T ss_dssp TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred CceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 5678999999999999999999988765333322 233334445566788888888888887621 345677
Q ss_pred HHHHHHHHHHHHHHhccCCC---CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccC
Q 015768 291 VKDLVRNREIIREALSPLGE---GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGL 367 (400)
Q Consensus 291 ~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~ 367 (400)
++++.++++.+.+.|++++. +..+.+++|+|.|+.++ . +.++.| +++||++.+++ |||++..
T Consensus 334 ~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls-----~-e~v~~L-~e~~Vy~~~~g--------Ris~Agl 398 (420)
T 4h51_A 334 AERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS-----K-AQCEYC-QNHNIFITVSG--------RANMAGL 398 (420)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC-----H-HHHHHH-HHTTEECCTTC--------EEEGGGC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC-----H-HHHHHH-HhCCEEEcCCC--------EEEeccC
Confidence 88899999999999998754 33445667999998774 2 345544 68999998864 9999988
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015768 368 VEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+++.++.++++|.++++++.+
T Consensus 399 ~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 399 THETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp CHHHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999988654
No 82
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=6.2e-40 Score=312.36 Aligned_cols=327 Identities=17% Similarity=0.126 Sum_probs=264.4
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhc-CCC-CCCCCCCC-C---cHHHHHHHHHHHHhhcC--CCCCcEEEeCChHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVW-DPS-ISKYGADE-G---LPELRDALVKKLNQENK--LYKSSVMVTAGANQA 101 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~-~~~-~~~y~~~~-g---~~~~~~~~a~~l~~~~~--~~~~~i~~~~g~t~a 101 (400)
...|+|+.|++++++|+.+.+++.+.+. .+. ...|++.. | ..++|+++++++.+.++ +++++|++|+|++++
T Consensus 56 ~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~a 135 (427)
T 2hox_A 56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL 135 (427)
T ss_dssp TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred CceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHH
Confidence 4689999999998878888888888774 321 23487777 8 89999999999987765 568999999999999
Q ss_pred HHHHHHHh--------cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 102 FVNIVLTL--------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 102 ~~~~~~~l--------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
+..++.++ .+|||+|+++.|+|+++...++..|++++.+ .+|++.|++.+++++ ++|++++|
T Consensus 136 l~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~--k~v~l~~p 205 (427)
T 2hox_A 136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQ--YIEMVTSP 205 (427)
T ss_dssp HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGG--EEEEEESS
T ss_pred HHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCc--eEEEEcCC
Confidence 99999999 8999999999999999999999999887654 347778888776554 99999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 253 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~ 253 (400)
|||||.+++ +.+ + ++..+.|+++.. ..........+++++++|+||.+|++|+|+||++.++ +++
T Consensus 206 ~NPtG~~~~-~~l-------~--~~~~i~d~~~~~---~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--~~l 270 (427)
T 2hox_A 206 NNPEGLLRH-AVI-------K--GCKSIYDMVYYW---PHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKD--ESV 270 (427)
T ss_dssp CTTTCCCCC-CSS-------T--TCEEEEECTTCS---TTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECC--HHH
T ss_pred CCCcccccH-HHH-------c--CCCEEEeecccC---CCCCccccCCCceEEEEeChhcCCCCCceEEEEEECC--HHH
Confidence 999999999 422 2 567888887753 1111111225688999999999999999999999854 788
Q ss_pred HHHHHHhhccCCcCccHHHHHHHHHHhcCC-----------cHHHHHHHHHHHHHHHHHHHHhccCCCCc----------
Q 015768 254 ATQLLKVQDNIPICASIISQHLALYSLQTG-----------PEWVTERVKDLVRNREIIREALSPLGEGA---------- 312 (400)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~---------- 312 (400)
++++.........+++.+.|.++..+|+.+ .+++.+.++.++++++++.+.|++++++.
T Consensus 271 ~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 350 (427)
T 2hox_A 271 YNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYC 350 (427)
T ss_dssp HHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEE
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcccccccccccc
Confidence 899888776666788999999988888753 24556778889999999999999874323
Q ss_pred ----ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 313 ----VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 313 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
+..|.+++|+|++++. +..+++..+++++||.+.||..|+. ++++|||++. +++++++++++|++++++
T Consensus 351 ~~~~~~~p~~g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~-~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 351 NYFRRMRPPSPSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIK-TQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp TTTTEEECCCCSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSS-CHHHHHHHHHHHHHHHTC
T ss_pred ccccccCCCCceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecC-CHHHHHHHHHHHHHHHhh
Confidence 2346679999999975 3456777777789999999998875 7899999996 899999999999988743
No 83
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.8e-37 Score=287.84 Aligned_cols=324 Identities=15% Similarity=0.131 Sum_probs=259.3
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAP 121 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p 121 (400)
+.++++++++.+.+.+ .|++ ...++++++++++++.+|++ ++++++|+|+++|+..++.++.++||+|+++.|
T Consensus 30 ~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~ 103 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMFS----HRSK--EYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTII 103 (386)
T ss_dssp CCCHHHHHHTTSCCCC----TTSH--HHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCcHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcC
Confidence 4578888887766542 3432 23678899999999988987 678999999999999999999999999999999
Q ss_pred Cccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768 122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (400)
Q Consensus 122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (400)
+|++ +...++..|++++.+ |.+++ +.+|++++++.++....+++|++++|+||||.+.+ +++|.++|++||++
T Consensus 104 ~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 178 (386)
T 2dr1_A 104 GAFGKRYKEVVESNGRKAVVL-EYEPG-KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDKL 178 (386)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTCE
T ss_pred CchhHHHHHHHHHhCCceEEE-ecCCC-CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCCe
Confidence 9998 788889999999999 88754 46899999999953223599999999999999999 89999999999999
Q ss_pred EEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH----------------Hh--h
Q 015768 200 LVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL----------------KV--Q 261 (400)
Q Consensus 200 li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~----------------~~--~ 261 (400)
+|+|++|+.+... ......+.+++++|+||+++.+ .++||++.+ +++++.+. .. .
T Consensus 179 li~D~a~~~~~~~---~~~~~~~~di~~~s~sK~~~~~-~g~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (386)
T 2dr1_A 179 VFVDAVSAMGGAD---IKFDKWGLDVVFSSSQKAFGVP-PGLAIGAFS---ERFLEIAEKMPERGWYFDIPLYVKYLKEK 251 (386)
T ss_dssp EEEECTTTBTTBC---CCTTTTTCSEEEEETTSTTCCC-SSCEEEEEC---HHHHHHHTTCTTCCSTTCHHHHHHHHHHH
T ss_pred EEEEccccccCcc---ccccccCCcEEEEeccccccCC-CceEEEEEC---HHHHHHHhcCCCCceEEeHHHHHHhhccC
Confidence 9999999966542 1222345689999999999744 248999998 67776652 12 2
Q ss_pred ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEeeCCCCCCCHHHH
Q 015768 262 DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 336 (400)
...+++++.+.+.++..+++...+ .++++.++++++++++.+.|++++ +.+..+. .+.++++.++.. .+..++
T Consensus 252 ~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 329 (386)
T 2dr1_A 252 ESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIG-LDILAEPGHESPTITAVLTPPG-IKGDEV 329 (386)
T ss_dssp SSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCTTCBCSSEEEEECCTT-CCHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-CeeCcCccccCCceEEEEcCCC-CCHHHH
Confidence 234567888888888888875222 257788889999999999999884 4555553 367888888743 367888
Q ss_pred HHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 337 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
..+|. ++||.+.+|..+..++++||+++. ++++++++++++|+++++++.
T Consensus 330 ~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 330 YEAMR-KRGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp HHHHH-HTTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 88887 569999999877667899999996 799999999999999998764
No 84
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=8.8e-37 Score=288.31 Aligned_cols=321 Identities=16% Similarity=0.130 Sum_probs=257.4
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (400)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~ 119 (400)
+.+.++++++++.+.+.+ .|++ ...++++++++++++.+|++++ ++++|+|+++|+..++.++.++||+|+++
T Consensus 42 ~~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~ 115 (393)
T 1vjo_A 42 PSNAHPSVLQAMNVSPVG----HLDP--AFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG 115 (393)
T ss_dssp CCCCCHHHHHHHSSCCCC----TTSH--HHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCHHHHHHHhccccc----ccCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence 345678899888776643 3532 2567889999999999899888 99999999999999999999999999999
Q ss_pred CCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
.|+|++ +...++..|++++.+ |.+++ +.+|++.+++.+++ ++ ++|++++|+||||.+.+ +++|.++|+++
T Consensus 116 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 188 (393)
T 1vjo_A 116 VAGYFGNRLVDMAGRYGADVRTI-SKPWG-EVFSLEELRTALETHRP--AILALVHAETSTGARQP---LEGVGELCREF 188 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred cCChhHHHHHHHHHHcCCceEEE-ecCCC-CCCCHHHHHHHHhhCCc--eEEEEeccCCCcceecc---HHHHHHHHHHc
Confidence 999998 888889999999999 88764 46899999999986 55 89999999999999999 88999999999
Q ss_pred CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh----h-----------
Q 015768 197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV----Q----------- 261 (400)
Q Consensus 197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~----~----------- 261 (400)
|+++|+|++|+.. ..+......+.+++++|+||+++.++ |+||++.+ +++++.+... .
T Consensus 189 ~~~li~Dea~~~g---~~~~~~~~~~~di~~~s~sK~l~~~~-~~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (393)
T 1vjo_A 189 GTLLLVDTVTSLG---GVPIFLDAWGVDLAYSCSQKGLGCSP-GASPFTMS---SRAIEKLQRRRTKVANWYLDMNLLGK 261 (393)
T ss_dssp TCEEEEECTTTTT---TSCCCTTTTTCSEEECCSSSTTCSCS-SCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHHHH
T ss_pred CCEEEEECCcccc---CcCCcccccCccEEEEcCcccccCCC-ceEEEEEC---HHHHHHHhccCCCCCceecCcHhhhh
Confidence 9999999999932 22222233466899999999998666 99999998 6777777432 0
Q ss_pred ----ccCCc-CccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEEeeCCCCCCC
Q 015768 262 ----DNIPI-CASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLD 332 (400)
Q Consensus 262 ----~~~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 332 (400)
....+ +++.+.+.++..+++... +++++..++++++++++.+.|++++ +.+..+.+ +.++++.++.. .+
T Consensus 262 ~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~-~~ 339 (393)
T 1vjo_A 262 YWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIG-LSLHVEKEYRLPTLTTVCIPDG-VD 339 (393)
T ss_dssp HHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEEEEECCTT-CC
T ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcC-CcccCCccccCCcEEEEEcCCC-CC
Confidence 02233 678888888888887522 3467788899999999999999884 46665543 35778887643 36
Q ss_pred HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHH
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l 383 (400)
..++...|.+++||.+.+|..|..++++||++ +. .+++++++++++|++++
T Consensus 340 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 340 GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 78888888754599999999887789999994 43 57778999999999876
No 85
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=5.1e-37 Score=292.37 Aligned_cols=351 Identities=17% Similarity=0.169 Sum_probs=258.7
Q ss_pred hHHHHHHHHHhcC------CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC------CCCCCC--CCCcHHHHHHHHHHHH
Q 015768 17 PIMVQIQELVRGA------KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS------ISKYGA--DEGLPELRDALVKKLN 82 (400)
Q Consensus 17 ~~~~~~~~~~~~~------~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~--~~g~~~~~~~~a~~l~ 82 (400)
..+..+++.|... +++++|+.+.++ +.|+.+++++.+.+.+.. ...|+. ..+..++++.+++++
T Consensus 8 ~~~~~~r~~f~~~~~~~~g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~- 85 (420)
T 1t3i_A 8 SLAATVRQDFPILNQEINGHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI- 85 (420)
T ss_dssp CHHHHHGGGCGGGSCEETTEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHhCCccccccCCCceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc-
Confidence 3445555555433 348999999987 678999999988886421 122321 234455666666655
Q ss_pred hhcCC-CCCcEEEeCChHHHHHHHHHHh----cCCCCEEEEeCCCccch----hHHHHhcCcEEEEeccCCCCCCCCCHH
Q 015768 83 QENKL-YKSSVMVTAGANQAFVNIVLTL----CDAGDSVVMFAPYYFNS----YMSFQMTGVTHILVGPCSSKTLHPDAD 153 (400)
Q Consensus 83 ~~~~~-~~~~i~~~~g~t~a~~~~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~e 153 (400)
+. +++++++|+|+|+|+..++.++ .++||+|+++.|+|++. ...++..|++++.+ |.+++ +.+|++
T Consensus 86 ---~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~ 160 (420)
T 1t3i_A 86 ---NARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV-QLDEQ-ESFDLE 160 (420)
T ss_dssp ---TCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEE-CBCTT-SSBCHH
T ss_pred ---CCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEe-ccCCC-CCcCHH
Confidence 66 6789999999999999999999 89999999999999984 45667789999999 88644 568999
Q ss_pred HHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768 154 WLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA 233 (400)
Q Consensus 154 ~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 233 (400)
.+++.+++++ ++|++++|+||||.++| +++|.++|++||+++|+|++|+.+... ......+.+++++|+||.
T Consensus 161 ~l~~~l~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~---~~~~~~~~di~~~s~sK~ 232 (420)
T 1t3i_A 161 HFKTLLSEKT--KLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP---LDVQLIDCDWLVASGHKM 232 (420)
T ss_dssp HHHHHCCTTE--EEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHHHTCSEEEEEGGGT
T ss_pred HHHHhhCCCc--eEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc---CchhhcCCCEEEEehhhh
Confidence 9999998654 99999999999999999 899999999999999999999854321 111122467899999998
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhcc--------------------CCcCccHHHHHHHHH-HhcCCc-HHHHHHH
Q 015768 234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDN--------------------IPICASIISQHLALY-SLQTGP-EWVTERV 291 (400)
Q Consensus 234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~--------------------~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~ 291 (400)
+|.+| +||++.+ +++++++...... +..+.+.+.+.++.. +++... .+++++.
T Consensus 233 ~~~~g--~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 307 (420)
T 1t3i_A 233 CAPTG--IGFLYGK---EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIH 307 (420)
T ss_dssp TSCTT--CEEEEEC---HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred cCCCc--eEEEEEc---hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 87556 8999998 7887777654321 112344455544333 444211 2356778
Q ss_pred HHHHHHHHHHHHHhccCCCCcccCCC-----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------CCCC
Q 015768 292 KDLVRNREIIREALSPLGEGAVKGGE-----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRG 358 (400)
Q Consensus 292 ~~~~~~~~~l~~~L~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~ 358 (400)
++++++++++.+.|++++++.+..+. .+.++++.++. .+..++...| .++||.+.+|..| +.++
T Consensus 308 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~g~~~ 384 (420)
T 1t3i_A 308 NYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAG--LHASDVATMV-DQDGIAIRSGHHCTQPLHRLFDASG 384 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETT--BCHHHHHHHH-HTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECC--CCHHHHHHHH-HHCCeEEeeccccchHHHHhcCCCC
Confidence 88899999999999988655665553 24455556763 3567788766 5889999998644 3378
Q ss_pred eEEEEecc-CCHHHHHHHHHHHHHHHHHHhccC
Q 015768 359 HLRISFGG-LVEDDCKAAADRLRRGLEELVKDG 390 (400)
Q Consensus 359 ~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~ 390 (400)
++||+++. +++++++.++++|+++++.+.+..
T Consensus 385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 417 (420)
T 1t3i_A 385 SARASLYFYNTKEEIDLFLQSLQATIRFFSDDD 417 (420)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTC---
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999997 799999999999999998876543
No 86
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=2e-36 Score=284.74 Aligned_cols=332 Identities=18% Similarity=0.167 Sum_probs=246.1
Q ss_pred EEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC-------CCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 33 VSLAQGVVYWQPPKMAMEKVKELVWDPSISK-------YGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 33 i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-------y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
+.|+.+.+. ++|+++++++.+.+.+..... |....+..++++.+++++ |++++++++|+|+++++..+
T Consensus 3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~~~~v~~~~g~t~a~~~~ 77 (384)
T 1eg5_A 3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL----GVSPSEIFFTSCATESINWI 77 (384)
T ss_dssp EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----TSCGGGEEEESCHHHHHHHH
T ss_pred EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc----CCCCCeEEEECCHHHHHHHH
Confidence 556666554 678999999999887521010 111223355566666555 78888999999999999999
Q ss_pred HHHhc----CCCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768 106 VLTLC----DAGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (400)
Q Consensus 106 ~~~l~----~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG 178 (400)
+.++. ++||+|+++.|+|+++...+ +..|++++.+ |.+++ +.+|++.+++.+++++ ++|++++|+||||
T Consensus 78 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~~nptG 153 (384)
T 1eg5_A 78 LKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYV-PVDSR-GVVKLEELEKLVDEDT--FLVSIMAANNEVG 153 (384)
T ss_dssp HHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEEC-CBCTT-SCBCHHHHHHHCCTTE--EEEEEESBCTTTC
T ss_pred HHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEE-ccCCC-CccCHHHHHHHhCCCC--eEEEEECCCCCcc
Confidence 99998 79999999999999887655 6789999999 88754 5689999999997654 9999999999999
Q ss_pred cCCCHHHHHHHHHHHHHcC--CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH--H
Q 015768 179 TYIPERLLKRISDLCKAAG--SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--A 254 (400)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~--~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~--~ 254 (400)
.++| +++|.++|++|| +++|+|++|+. +..+......+.+++++|+||++|++| +||+++++ ++ .
T Consensus 154 ~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~~~~~~~~~~~di~~~s~sK~~g~~G--~G~~~~~~---~~~~~ 222 (384)
T 1eg5_A 154 TIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GKIPFSLEKLEVDYASFSAHKFHGPKG--VGITYIRK---GVPIR 222 (384)
T ss_dssp BBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TTSCCCCTTTCCSEEEEEGGGGTSCTT--CEEEEECT---TSCCC
T ss_pred cccC---HHHHHHHHHhcCCceEEEEEhhhhc---CCcccCchhcCCCEEEecHHHhcCCCc--eEEEEEcC---CCccc
Confidence 9999 889999999999 99999999983 222222222357799999999998667 79999884 32 1
Q ss_pred HHHHHh---hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEeeCCC
Q 015768 255 TQLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWARLPE 328 (400)
Q Consensus 255 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~ 328 (400)
+.+... ....+++++.+.+.++..+|+...+++++..++++++++++.+.|++.+ +.+..+. .+.++++.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~ 301 (384)
T 1eg5_A 223 PLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG-AHIITPLEISLPNTLSVSFPN 301 (384)
T ss_dssp CSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTT-CEECSCTTSBCTTEEEEECTT
T ss_pred cccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCC-eEEeCCcccCCCCEEEEEeCC
Confidence 111110 1123557788888888888875335577888899999999999998843 4554432 13466666663
Q ss_pred CCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 329 KHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+..++.+.|. ++||.+.+|..|.. ++++||+++. ++++++++++++|+++++++.+
T Consensus 302 --~~~~~~~~~l~-~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 302 --IRGSTLQNLLS-GYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL 378 (384)
T ss_dssp --CCHHHHHHHHH-HTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred --CCHHHHHHHHh-hCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 36778888774 89999999886642 3689999996 7999999999999999988754
No 87
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=1.3e-35 Score=283.18 Aligned_cols=343 Identities=16% Similarity=0.082 Sum_probs=256.1
Q ss_pred cCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcC-C-CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWD-P-SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+|+++++|+.+++ ++..++++++++.+.+.+ + ....|....|.....+++++.+++.+|.+ +.+++++|++++..
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~ 139 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGTT--GAIVFSTGYMANLG 139 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHH
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCCC--ceEEecCcHHHHHH
Confidence 3567899999974 445789999999888765 2 12223334444344445555555555653 66777777889999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC--CCeEEEEeCCCCCCccCCC
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP--TPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~--~~~~v~l~~p~nptG~~~~ 182 (400)
++.++.++||.|+++.|+|.++...++..|.+++.+ |. .|+++|++.++... .+++|++++++||+|.+.+
T Consensus 140 al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~-~~------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~ 212 (427)
T 2w8t_A 140 IISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRF-RH------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP 212 (427)
T ss_dssp HHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEE-CT------TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC
T ss_pred HHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEe-CC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 999999999999999999999999999999999888 63 48999999987521 3599999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCC--CCc---cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKH---CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~---~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
+++|.++|++||+++|+||+|+.+.++. ... .....+.+++++|+||++|++| ||++++ +++++.+
T Consensus 213 ---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~---~~l~~~l 283 (427)
T 2w8t_A 213 ---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSN---HPKFEAV 283 (427)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEEC---CTTGGGG
T ss_pred ---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeC---HHHHHHH
Confidence 8999999999999999999999877652 111 1123456899999999998666 999988 5666655
Q ss_pred HHhh--ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCCCCCHH
Q 015768 258 LKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 258 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 334 (400)
.... ...+.+.+++.+.++..+++.. +..++++++++++++++.+.|++++. .+. .+..+.++++.++.. .+..
T Consensus 284 ~~~~~~~~~~~~~~~~~~aa~~~al~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~-~~~~ 360 (427)
T 2w8t_A 284 RLACRPYIFTASLPPSVVATATTSIRKL-MTAHEKRERLWSNARALHGGLKAMGF-RLGTETCDSAIVAVMLEDQ-EQAA 360 (427)
T ss_dssp GGTCHHHHSSCCCCHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHHHHHHHHTC-EESCSSCCSSEEEEEESSH-HHHH
T ss_pred HHhcccccccCCCCHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHcCC-cccCCCCCCCEEEEEECCH-HHHH
Confidence 5431 1234566777777776777642 12467788899999999999988753 555 341467888888642 1356
Q ss_pred HHHHHHHHhcCeEEeCCCccCC---CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhccCcc
Q 015768 335 EVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKDGMV 392 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~ 392 (400)
++...|. ++||.+.++..|.. .+++|++++. ++++++++++++|+++++++.+....
T Consensus 361 ~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~~~~ 421 (427)
T 2w8t_A 361 MMWQALL-DGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVIGLE 421 (427)
T ss_dssp HHHHHHH-HTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTCC---
T ss_pred HHHHHHH-HCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCccccc
Confidence 7888776 67999999887653 3689999997 79999999999999999987665443
No 88
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=5.5e-36 Score=283.33 Aligned_cols=337 Identities=14% Similarity=0.072 Sum_probs=249.8
Q ss_pred CCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 29 AKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 29 ~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
++++++|+.+++ ++..++++.+++.+.+.+... ..+....|.....+++++.+++.+|.+ + .++++++++++..+
T Consensus 42 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~-~-~i~~~sGt~a~~~~ 119 (399)
T 3tqx_A 42 EKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGTD-D-TILYSSCFDANGGL 119 (399)
T ss_dssp TEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTCS-E-EEEESCHHHHHHTT
T ss_pred CeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCCC-c-EEEECchHHHHHHH
Confidence 467899999953 234689999999888764211 011112333333444444444444653 4 55555668899999
Q ss_pred HHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccCC
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~~ 181 (400)
+.++.++||.|+++.|+|+++...++..|.+++.+ |. .|++++++.++.. ..+++|++++|+||||.++
T Consensus 120 l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~ 192 (399)
T 3tqx_A 120 FETLLGPEDAIISDELNHASIIDGIRLCKAQRYRY-KN------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIA 192 (399)
T ss_dssp HHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEE-CT------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEEC
T ss_pred HHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEe-CC------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcC
Confidence 99999999999999999999999999999999988 65 3667888888741 1359999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--c---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--C---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
| +++|.++|++||+++|+||+|+.+..+.... . ....+.+++++|+||+++ |++.||++.+ +++++.
T Consensus 193 ~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~---~~~~~~ 264 (399)
T 3tqx_A 193 D---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH---KEIIEW 264 (399)
T ss_dssp C---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC---HHHHHH
T ss_pred C---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC---HHHHHH
Confidence 9 8999999999999999999997433322111 1 112356799999999997 4455999998 788888
Q ss_pred HHHhhc--cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHH
Q 015768 257 LLKVQD--NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 257 l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (400)
+..... ..+.+.+.+.+.++..+++...++..+.+++++++++++.+.|++++. .+..+. +.++|+.++... +..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~-~~~~~~~~~~~~-~~~ 341 (399)
T 3tqx_A 265 LRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLGF-QLVPGN-HPIIPVMLGDAQ-LAT 341 (399)
T ss_dssp HHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTC-CBCCCS-SSEEEEEEECHH-HHH
T ss_pred HHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC-CcCCCC-CCEEEEEeCCHH-HHH
Confidence 876432 234467788888888888752255688889999999999999998854 555555 677888886432 467
Q ss_pred HHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
++...|. ++||.+.++..+. .++++|++++. .+++++++++++|+++++++
T Consensus 342 ~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 342 NMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp HHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 8888886 6899999876543 34699999985 79999999999999999864
No 89
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1.3e-35 Score=275.90 Aligned_cols=322 Identities=14% Similarity=0.042 Sum_probs=240.7
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeC
Q 015768 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFA 120 (400)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~ 120 (400)
+.++|+++++++.+.+... ..+.......++++.++++ +|++++++++|+|+++++..++.++.++||+|+++.
T Consensus 9 p~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~----~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 82 (352)
T 1iug_A 9 PVRLHPKALEALARPQLHH--RTEAAREVFLKARGLLREA----FRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPV 82 (352)
T ss_dssp SCCCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHH----HTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHH----hCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEe
Confidence 3467899999998876531 1111112234455555554 478788999999999999999999999999999999
Q ss_pred CCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--
Q 015768 121 PYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-- 196 (400)
Q Consensus 121 p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-- 196 (400)
|+|+++. ..++..|++++.+ |.++++ .+|++++++ ++ +++|++++|+||||.+.+ +++|.++|++|
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~---~~--~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 152 (352)
T 1iug_A 83 YGKFSERFYEIALEAGLVVERL-DYPYGD-TPRPEDVAK---EG--YAGLLLVHSETSTGALAD---LPALARAFKEKNP 152 (352)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCTTTSCC---SS--CSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred CCchhHHHHHHHHHcCCceEEE-eCCCCC-CCCHHHHhc---cC--CcEEEEEEecCCcceecC---HHHHHHHHHhhCC
Confidence 9998865 4556689999999 887554 578887766 33 489999999999999999 88999999999
Q ss_pred CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH---------HH----Hh-hc
Q 015768 197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ---------LL----KV-QD 262 (400)
Q Consensus 197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~---------l~----~~-~~ 262 (400)
|+++|+|++|+... .+......+.+++++|+||+++ ++.++||++.+ ++++++ +. .. ..
T Consensus 153 ~~~li~D~a~~~~~---~~~~~~~~~~d~~~~s~~K~~~-~~~g~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T 1iug_A 153 EGLVGADMVTSLLV---GEVALEAMGVDAAASGSQKGLM-CPPGLGFVALS---PRALERLKPRGYYLDLARELKAQKEG 225 (352)
T ss_dssp TCEEEEECTTTBTT---BCCCSGGGTCSEEEEESSSTTC-CCSCEEEEEEC---HHHHHTCCCCSSTTCHHHHHHHHTTT
T ss_pred CCEEEEECCccccC---cceeccccCeeEEEecCccccc-CCCceeEEEEC---HHHHHHhhCCCceeeHHHHHhhcccC
Confidence 99999999997422 2211122246788999999664 23357999988 565543 21 11 12
Q ss_pred cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-CceEEEeeCCCCCCCHHHHHHHHH
Q 015768 263 NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLA 341 (400)
Q Consensus 263 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 341 (400)
...++++...+.++..+++...+++++..++++++++++.+.|+++ ++.+..+. .++++++.++.. .+..++.++|.
T Consensus 226 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 303 (352)
T 1iug_A 226 ESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEG-VPYARVKEAFA 303 (352)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTT-CCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCC-CCHHHHHHHHH
Confidence 2345677777777777776433336788889999999999999987 44666553 577888888743 36788888886
Q ss_pred HhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 342 HRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 342 ~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++||.+.+|..+..++++||+++. ++++++++++++|+++++++.+
T Consensus 304 -~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 350 (352)
T 1iug_A 304 -QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEILP 350 (352)
T ss_dssp -TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC-
T ss_pred -HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhcC
Confidence 679999998865567899999997 6899999999999999987643
No 90
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.8e-35 Score=279.22 Aligned_cols=336 Identities=16% Similarity=0.125 Sum_probs=247.9
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC 110 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~ 110 (400)
+.+.|+.+. +.++|+.+++++.+.+... ++ .......+.+.+.+++.+|++++++++|+|+|+++..++.++.
T Consensus 8 ~~~yl~~~~-~~~~~~~v~~a~~~~~~~~----~~--~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~ 80 (392)
T 2z9v_A 8 DPVITLTAG-PVNAYPEVLRGLGRTVLYD----YD--PAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLI 80 (392)
T ss_dssp CCSEECSSS-CCCCCHHHHHHTTSCCCCT----TS--HHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHC
T ss_pred CcceeecCC-CcCCCHHHHHHHhcccccc----cc--HHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhc
Confidence 344555543 3467889999888776541 11 1122333444444555558878999999999999999999999
Q ss_pred CCCCEEEEeCCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 111 DAGDSVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 111 ~~gd~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
++||+|+++.|+|+++. ..++..|++++.+ |.++++ .+|++.+++.++....+++|++++|+||||.++| +++
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~ 155 (392)
T 2z9v_A 81 SPDDVVLNLASGVYGKGFGYWAKRYSPHLLEI-EVPYNE-AIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDA 155 (392)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHHCSCEEEE-ECCTTS-CCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHH
T ss_pred CCCCEEEEecCCcccHHHHHHHHHcCCceEEe-eCCCCC-CCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHH
Confidence 99999999999998753 4456679999999 887664 6899999999953223589999999999999999 889
Q ss_pred HHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ------- 261 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~------- 261 (400)
|.++|++||+++|+|++|+.... +......+.+++++|+||+++ ++.++||++.+ +++++++....
T Consensus 156 i~~l~~~~~~~li~D~a~~~g~~---~~~~~~~~~d~~~~s~sK~~~-~~~g~G~l~~~---~~~~~~l~~~~~g~~~~~ 228 (392)
T 2z9v_A 156 IGALVSAHGAYLIVDAVSSFGGM---KTHPEDCKADIYVTGPNKCLG-APPGLTMMGVS---ERAWAKMKANPLAPRASM 228 (392)
T ss_dssp HHHHHHHTTCEEEEECTTTBTTB---SCCGGGGTCSEEEECSSSTTC-CCSCCEEEEEC---HHHHHHHHTCTTSCCSST
T ss_pred HHHHHHHcCCeEEEEcccccCCc---ccccccccceEEEecCccccc-CCCceeEEEEC---HHHHHHhhhccCCCCcee
Confidence 99999999999999999984321 111222346789999999764 23345999998 77877776421
Q ss_pred -------------ccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEE
Q 015768 262 -------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLW 323 (400)
Q Consensus 262 -------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~ 323 (400)
.....+++...+.++..+++...++ +++..++++++++++.+.|++++ +.+..|. .+.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~ 307 (392)
T 2z9v_A 229 LSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMG-LSVWAASDSIASPTTTA 307 (392)
T ss_dssp TCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSSSGGGBCTTEEE
T ss_pred ccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcC-CeeccCCccccCCceEE
Confidence 1123445666666666666542333 57788889999999999998874 4555422 467788
Q ss_pred eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-c-cCCHHHHHHHHHHHHHHHHHHh
Q 015768 324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-G-GLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~-~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+.++.. .+..++..+|.+++||.+.+|..+..++++|+++ + .++++++++++++|+++++++.
T Consensus 308 ~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 308 VRTPDG-VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp EECCTT-CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred EECCCC-CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 888643 3678888888744599999998776789999994 6 4799999999999999998764
No 91
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=6.6e-35 Score=276.47 Aligned_cols=334 Identities=15% Similarity=0.160 Sum_probs=250.0
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC--CCCC------CCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--ISKY------GADEGLPELRDALVKKLNQENKL-YKSSVMVTAGAN 99 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y------~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t 99 (400)
|++++.|+.+.++ +.|+++++++.+.+.+.. ...+ .+..+..++++.+++++ +. +++++++|+|+|
T Consensus 21 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t 95 (406)
T 1kmj_A 21 GLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI----NARSAEELVFVRGTT 95 (406)
T ss_dssp TEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT----TCSCGGGEEEESSHH
T ss_pred CCceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc----CCCCCCeEEEeCChh
Confidence 3468999999877 578899999988886531 1111 12233445555555554 76 578999999999
Q ss_pred HHHHHHHHHh----cCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe
Q 015768 100 QAFVNIVLTL----CDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (400)
Q Consensus 100 ~a~~~~~~~l----~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~ 171 (400)
+|+..++.++ .++||+|+++.|+|++... .++..|++++.+ |.+++ +.+|++.+++.+++++ ++|+++
T Consensus 96 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~~~d~~~l~~~l~~~~--~~v~~~ 171 (406)
T 1kmj_A 96 EGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI-PLNPD-GTLQLETLPTLFDEKT--RLLAIT 171 (406)
T ss_dssp HHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE-CBCTT-SCBCGGGHHHHCCTTE--EEEEEE
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE-ecCCC-CCcCHHHHHHHhccCC--eEEEEe
Confidence 9999999999 8999999999999987653 356789999999 87754 4689999999997654 999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 251 (400)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~ 251 (400)
+|+||||.++| +++|.++|++||+++|+|++|+.+.. +......+.+++++|+||.+|++| +||++.+ +
T Consensus 172 ~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~---~~~~~~~~~d~~~~s~~K~~g~~G--~G~~~~~---~ 240 (406)
T 1kmj_A 172 HVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH---PVDVQALDCDFYVFSGHKLYGPTG--IGILYVK---E 240 (406)
T ss_dssp SBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHHHTCSEEEEEGGGTTSCTT--CEEEEEC---H
T ss_pred CCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC---CCcccccCCCEEEEEchhccCCCC--cEEEEEe---H
Confidence 99999999999 89999999999999999999986432 111112356789999999998666 7999998 7
Q ss_pred HHHHHHHHhhcc---------------------CCcCccHHHHHHHH-HHhcCCc-HHHHHHHHHHHHHHHHHHHHhccC
Q 015768 252 GFATQLLKVQDN---------------------IPICASIISQHLAL-YSLQTGP-EWVTERVKDLVRNREIIREALSPL 308 (400)
Q Consensus 252 ~~~~~l~~~~~~---------------------~~~~~~~~~~~~~~-~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 308 (400)
++++++...... ...+.+.+.+.++. .+++... .++++..++++++++++.+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 320 (406)
T 1kmj_A 241 ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV 320 (406)
T ss_dssp HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC
Confidence 888776543311 11223444444433 4554311 245677888889999999999998
Q ss_pred CCCcccCC--CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc--------CCCCeEEEEecc-CCHHHHHHHHH
Q 015768 309 GEGAVKGG--EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC--------GCRGHLRISFGG-LVEDDCKAAAD 377 (400)
Q Consensus 309 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~--------~~~~~iRi~~~~-~~~~~~~~~~~ 377 (400)
+++.+..+ .+++ +++.++. .+..++...| .++||.+.+|..| +.++++||+++. +++++++.+++
T Consensus 321 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~ 396 (406)
T 1kmj_A 321 PDLTLYGPQNRLGV-IAFNLGK--HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVT 396 (406)
T ss_dssp TTEEEESCTTCCSE-EEEEETT--CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHH
T ss_pred CCeEEecCCCcCCE-EEEEECC--CCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHH
Confidence 66566666 5444 4446653 3577788766 5889999998753 346899999997 69999999999
Q ss_pred HHHHHHHHH
Q 015768 378 RLRRGLEEL 386 (400)
Q Consensus 378 ~l~~~l~~~ 386 (400)
.|+++++.+
T Consensus 397 ~l~~~~~~l 405 (406)
T 1kmj_A 397 GLQRIHRLL 405 (406)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999988754
No 92
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1.4e-35 Score=279.14 Aligned_cols=329 Identities=12% Similarity=0.066 Sum_probs=250.9
Q ss_pred cCCCeEEcCCCCC-CCCCcHHHHHHHHHhhcC-CC---CCCC--CCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768 28 GAKNAVSLAQGVV-YWQPPKMAMEKVKELVWD-PS---ISKY--GADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (400)
Q Consensus 28 ~~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~ 100 (400)
+++++++|+.+.+ ++++++++++++.+.+.+ +. ...| +...+..++++.+++++ |++ +.++++++++
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~ 110 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----GYS--RALLFISGFA 110 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----TCS--EEEEESCHHH
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----CCC--cEEEeCCcHH
Confidence 4677999999874 556789999999888764 21 1123 33345566777777776 664 4566666689
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCcc
Q 015768 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGT 179 (400)
Q Consensus 101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~ 179 (400)
++..++.++.++||.|+++.|+|..+...++..|.+++.+ |. .|++++++.+++.. ..+++++++|+||||.
T Consensus 111 a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~ 183 (384)
T 1bs0_A 111 ANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRF-AH------NDVTHLARLLASPCPGQQMVVTEGVFSMDGD 183 (384)
T ss_dssp HHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEE-CT------TCHHHHHHHHHSCCSSCEEEEEESBCTTTCC
T ss_pred HHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEe-CC------CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCC
Confidence 9999999999999999999999999999999999999988 63 37899999887532 2488888899999999
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccccccC--CCCc-cccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYD--GRKH-CCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~--~~~~-~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
+++ +++|.++|++||+++|+||+|+.+.++ +... .....+.+++++|+||++|++| ||++.+ +++++.
T Consensus 184 ~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~---~~~~~~ 254 (384)
T 1bs0_A 184 SAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG---AAVLCS---STVADY 254 (384)
T ss_dssp BCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC---EEEEEC---HHHHHH
T ss_pred ccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC---cEEEeC---HHHHHH
Confidence 999 889999999999999999999876543 1111 1111234589999999998656 999998 788887
Q ss_pred HHHhh--ccCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768 257 LLKVQ--DNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333 (400)
Q Consensus 257 l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (400)
+.... ...+.+++++.+.++..+++...+ +.++..++++++++++.+.|++++. .+.+ ..++++|+.++.. .+.
T Consensus 255 l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~-~~~~~~~~~~~~~-~~~ 331 (384)
T 1bs0_A 255 LLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPF-TLAD-SCSAIQPLIVGDN-SRA 331 (384)
T ss_dssp HHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSC-EECS-CCSSBCCEEEESH-HHH
T ss_pred HHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCC-cccC-CCCCEEEEEeCCH-HHH
Confidence 76542 222346788888888877775222 5678888999999999999999864 5554 3467777887632 246
Q ss_pred HHHHHHHHHhcCeEEeCCCccCC---CCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
.++..+|. ++||.+.++..++. .+++||+++. ++++++++++++|+++
T Consensus 332 ~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 332 LQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 67888876 67999999887642 4789999986 6899999999999864
No 93
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=6.6e-35 Score=275.45 Aligned_cols=320 Identities=13% Similarity=0.028 Sum_probs=249.4
Q ss_pred CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCC---------
Q 015768 42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA--------- 112 (400)
Q Consensus 42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~--------- 112 (400)
.++++++++++.+.+.+.. ..+....+..++++++++++++.+|.+++++++|+|+++|+..++.++..+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~ 118 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGL 118 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcc
Confidence 3567899999999887642 222222255788888999999999999999999999999999999999766
Q ss_pred ----CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 113 ----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 113 ----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
||+|+++.|+|+++...++..|++++.+ |.+++ +.+|++.+++.+++ ++ ++|++++|+||||.+.+ ++
T Consensus 119 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~ 191 (397)
T 3f9t_A 119 SKNEHPKIIVPITAHFSFEKGREMMDLEYIYA-PIKED-YTIDEKFVKDAVEDYDV--DGIIGIAGTTELGTIDN---IE 191 (397)
T ss_dssp CCCSSCEEEEETTCCTHHHHHHHHHTCEEEEE-CBCTT-SSBCHHHHHHHHHHSCC--CEEEEEBSCTTTCCBCC---HH
T ss_pred cCCCCeEEEECCcchhHHHHHHHHcCceeEEE-eeCCC-CcCCHHHHHHHHhhcCC--eEEEEECCCCCCCCCCC---HH
Confidence 9999999999999999999999999999 88765 57899999999987 55 99999999999999999 88
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCC-----------CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHH
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGR-----------KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQ 256 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~-----------~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~ 256 (400)
+|.++|++||+++|+|++|+.+..+.. +..... +.++++.|++|+++ +|.++|+++.++ +.+.+.
T Consensus 192 ~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~-~~~~~g~~~~~~--~~~~~~ 267 (397)
T 3f9t_A 192 ELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGH-CPIPSGGILFKD--IGYKRY 267 (397)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTC-CCSSCEEEEESS--GGGGGG
T ss_pred HHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccC-CCCCceEEEEeC--HHHHHh
Confidence 999999999999999999987654211 111222 56788999999885 678999988875 444444
Q ss_pred HHHhhcc-----------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEee
Q 015768 257 LLKVQDN-----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325 (400)
Q Consensus 257 l~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 325 (400)
+...... .....+.+.+.++...+. ..++.+..+++.++++++.+.|++++. .+..+..+.++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~ 344 (397)
T 3f9t_A 268 LDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG--REGQRKIVNECMENTLYLYKKLKENNF-KPVIEPILNIVAIE 344 (397)
T ss_dssp TCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTC-CBSSCCSSSEEEEE
T ss_pred hccCCccccCCCccccccccccchHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHCCC-EEEcCCCccEEEEE
Confidence 3221111 111235566666666664 355678888889999999999998844 54444447777888
Q ss_pred CCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
++. ..++...|. ++||.+.++. .++++||+++. ++++++++++++|+++++
T Consensus 345 ~~~----~~~~~~~l~-~~gi~v~~~~---~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 345 DED----YKEVCKKLR-DRGIYVSVCN---CVKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp CTT----HHHHHHHHH-HTTCBCEECS---SSSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred eCC----HHHHHHHHH-hCCeEEeccC---CCCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 763 677888776 6799999876 36899999986 799999999999998764
No 94
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.1e-34 Score=274.00 Aligned_cols=332 Identities=10% Similarity=0.060 Sum_probs=249.1
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhc
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLC 110 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~ 110 (400)
.+.+..| ++++|+++++++.+.+... |.+ ......+++.+.+++.+|++++ ++++|+|+|+|+..++.++.
T Consensus 20 ~~~~~~g--~~~~~~~v~~a~~~~~~~~----~~~--~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~ 91 (393)
T 2huf_A 20 KLLMGPG--PSNAPQRVLDAMSRPILGH----LHP--ETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLL 91 (393)
T ss_dssp CEECSSS--CCCCCHHHHHHTTSCCCCT----TSH--HHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHC
T ss_pred eEEecCC--CCCCCHHHHHHHHhhhccC----CCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHh
Confidence 3445444 4567899999887766531 311 1233444555555555588775 89999999999999999999
Q ss_pred CCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 111 DAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 111 ~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
++||+|+++.|+|++. ...++..|++++.+ |.+++ +.+|++.+++.+++ ++ ++|++++|+||||.++| ++
T Consensus 92 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~ 164 (393)
T 2huf_A 92 EDGDVILIGHTGHWGDRSADMATRYGADVRVV-KSKVG-QSLSLDEIRDALLIHKP--SVLFLTQGDSSTGVLQG---LE 164 (393)
T ss_dssp CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CT
T ss_pred CCCCEEEEECCCcchHHHHHHHHHcCCeeEEE-eCCCC-CCCCHHHHHHHHhccCC--cEEEEEccCCCccccCC---HH
Confidence 9999999999999884 34456689999999 88765 46899999999986 55 99999999999999999 88
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc-CCCcceeEEEEccCCcHHHHHHHHHhh----c
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSEVEGFATQLLKVQ----D 262 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~~~~~~~~l~~~~----~ 262 (400)
+|.++|++||+++|+|++++... .+......+.+++++|+||++ |++|+ ||++.+ +++++.+.... .
T Consensus 165 ~i~~~~~~~~~~li~D~a~~~~~---~~~~~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~---~~~~~~~~~~~~~~~~ 236 (393)
T 2huf_A 165 GVGALCHQHNCLLIVDTVASLGG---APMFMDRWEIDAMYTGSQKVLGAPPGI--TPVSFS---HRAVERYKRRNTKVKV 236 (393)
T ss_dssp THHHHHHHTTCEEEEECTTTBTT---BCCCTTTTTCSEEECCSSSTTCCCSSC--EEEEEC---HHHHHHHHTCSSCCSC
T ss_pred HHHHHHHHcCCEEEEEcccccCC---CCcchhhcCccEEEECCCcccccCCCe--EEEEEC---HHHHHHHhhcCCCCce
Confidence 99999999999999999987432 222222335779999999985 45565 999988 78888876541 0
Q ss_pred -------------------cCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhccCCCCcccCCC---Cc
Q 015768 263 -------------------NIPICASIISQHLALYSLQTGPE-WVTERVKDLVRNREIIREALSPLGEGAVKGGE---GA 319 (400)
Q Consensus 263 -------------------~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~ 319 (400)
....+++...+.++..+++...+ .+++..++++++++++.+.|++++ +.+..+. .+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~ 315 (393)
T 2huf_A 237 YYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAG-FELYADPKDRLS 315 (393)
T ss_dssp GGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCT
T ss_pred EEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCccccCC
Confidence 01124566666666666664222 267788888999999999998884 4555442 34
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+++++++.. .+..++..+|.+++||.+.+|..+..++++||++ +. ++++++++++++|+++++++..
T Consensus 316 ~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 316 TVTTIKVPQG-VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp TEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred cEEEEEcCCC-CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 5778888643 3678888888756799999998877789999999 54 4789999999999999988754
No 95
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=3.6e-35 Score=273.68 Aligned_cols=333 Identities=13% Similarity=0.073 Sum_probs=249.2
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
.+++++|+.+.+. ++++.+++++.+.+.+ |....+..++++++++++++.+|.+++++++|+|+++++..++.+
T Consensus 12 ~p~~i~l~~~~~~-~~~~~v~~a~~~~~~~-----~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~ 85 (359)
T 1svv_A 12 KPKPYSFVNDYSV-GMHPKILDLMARDNMT-----QHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSL 85 (359)
T ss_dssp ---CEECSCSCSS-CCCHHHHHHHHHHTTC-----CCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHH
T ss_pred CCeeEEecCCCcC-CCCHHHHHHHHHHHhh-----ccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHH
Confidence 3568999997666 7789999999998753 545567788999999999999898889999999999999999999
Q ss_pred hcCCCCEEEEeCCCccchhH--HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-----CCeEEEEeCCCCCCccCC
Q 015768 109 LCDAGDSVVMFAPYYFNSYM--SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-----TPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-----~~~~v~l~~p~nptG~~~ 181 (400)
+.++||+|+++.|+|+++.. .++..|++++.+ |.+ ++.+|++++++.++++. .+++|++++| ||||.++
T Consensus 86 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~ 161 (359)
T 1svv_A 86 ALRPWEAVIATQLGHISTHETGAIEATGHKVVTA-PCP--DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY 161 (359)
T ss_dssp HCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEE-CCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC
T ss_pred HhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEE-eCC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec
Confidence 99999999999999999887 478899999999 875 45789999999987541 2589999998 7999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC----CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE----GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
|.+++++|.++|++||+++|+|++|..+..+..+..... ...++++.|++|..+ ..+.|+++.+ +++++.+
T Consensus 162 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~---~~~~~~~ 236 (359)
T 1svv_A 162 TKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG--MFGEALIILN---DALKPNA 236 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECS---GGGCTTH
T ss_pred CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC--CCceEEEEEc---ccHHHHH
Confidence 999999999999999999999999965543322211110 234578889999743 3567999987 5665555
Q ss_pred HHhh--ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHH
Q 015768 258 LKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFE 335 (400)
Q Consensus 258 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (400)
.... ....+..+......+..+++. +..++..+++.++++++.+.| +.+++.+..+.+++++|++++ .+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~------~~ 307 (359)
T 1svv_A 237 RHLIKQRGALMAKGWLLGIQFEVLMKD--NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE------NT 307 (359)
T ss_dssp HHHHHHTTCCCTTTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE------HH
T ss_pred HHHHhcCCcccccchhhHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC------HH
Confidence 5432 212222222233333445654 345778888999999999999 555557776777888888775 47
Q ss_pred HHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 336 VVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
+.++|.+++||.+.+. ....++++|++++. .+++++++++++|+++++++
T Consensus 308 ~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 308 MIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp HHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred HHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 7887764449998321 11246799999876 79999999999999987653
No 96
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=2.1e-35 Score=281.55 Aligned_cols=342 Identities=15% Similarity=0.104 Sum_probs=254.0
Q ss_pred hcCCCeEEcCCCCCCCCCcHHHHHHHHHhhc--CCCCC----CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768 27 RGAKNAVSLAQGVVYWQPPKMAMEKVKELVW--DPSIS----KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~--~~~~~----~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~ 100 (400)
..+++.+.|+.+.+. ++|+++++++.+.+. +.... .|....+..+..+++.+++++.++++++++++|+|+++
T Consensus 18 ~~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~ 96 (423)
T 3lvm_A 18 RAMKLPIYLDYSATT-PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATE 96 (423)
T ss_dssp --CCSSEECBTTTCC-CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHH
T ss_pred cccCCCEeecCCCcC-CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHH
Confidence 556888999887665 678999999998877 32110 11111122345566666666666888899999999999
Q ss_pred HHHHHHHHhcC----CCCEEEEeCCCccchhHHH---HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 101 AFVNIVLTLCD----AGDSVVMFAPYYFNSYMSF---QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 101 a~~~~~~~l~~----~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
|+..++.++.+ +||+|+++.++|+++...+ +..|++++.+ |.+++ +.+|++.+++.+++++ ++|++++|
T Consensus 97 a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~ 172 (423)
T 3lvm_A 97 SDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL-APQRN-GIIDLKELEAAMRDDT--ILVSIMHV 172 (423)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEE-CCCTT-SCCCHHHHHHHCCTTE--EEEECCSB
T ss_pred HHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEe-ccCCC-CccCHHHHHHhcCCCc--EEEEEeCC
Confidence 99999998874 7999999999999988776 4459999999 88764 4689999999998755 99999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 253 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~ 253 (400)
+||||.++| +++|.++|++||+++|+|++|+.... +......+.+++++|+||.+|.+| +|+++.++ +.
T Consensus 173 ~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~---~~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~---~~ 241 (423)
T 3lvm_A 173 NNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL---PIDLSQLKVDLMSFSGHKIYGPKG--IGALYVRR---KP 241 (423)
T ss_dssp CTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS---CCCTTTSCCSEEEEESTTTTSCSS--CEEEEECB---TT
T ss_pred CCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC---CcChhhcCCCEEEechHHhcCCCC--eEEEEEec---cc
Confidence 999999999 88899999999999999999875322 222223456799999999887555 89988883 33
Q ss_pred HHHHHHhhc-------cCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEE
Q 015768 254 ATQLLKVQD-------NIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLW 323 (400)
Q Consensus 254 ~~~l~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~ 323 (400)
.+.+..... ....+.+...+.++..+++...+++++..++++++++++.+.|++++++.+..+.. +.+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 321 (423)
T 3lvm_A 242 RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILN 321 (423)
T ss_dssp BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEE
T ss_pred cCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEE
Confidence 333332211 22345677777777677764334568888999999999999999886656655442 24555
Q ss_pred eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+.++. .+..++...|. + |.+.+|..|.. ++++||+++. ++++++++++++|++++
T Consensus 322 ~~~~~--~~~~~l~~~l~-~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~ 396 (423)
T 3lvm_A 322 VSFNY--VEGESLIMALK-D--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI 396 (423)
T ss_dssp EEETT--SCHHHHHHHTT-T--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeCC--CCHHHHHHHHh-h--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 55543 35777887664 4 99999876643 4899999997 78999999999999999
Q ss_pred HHHhcc
Q 015768 384 EELVKD 389 (400)
Q Consensus 384 ~~~~~~ 389 (400)
+++.+.
T Consensus 397 ~~~~~~ 402 (423)
T 3lvm_A 397 GRLRDL 402 (423)
T ss_dssp HHHHTS
T ss_pred HHhhcc
Confidence 988654
No 97
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=8.5e-37 Score=286.11 Aligned_cols=330 Identities=16% Similarity=0.099 Sum_probs=247.5
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC--------CCCCCCCCCcHHHHHH-HHHHHHhhcCCCCCcEEEeCChH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS--------ISKYGADEGLPELRDA-LVKKLNQENKLYKSSVMVTAGAN 99 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~~~~~-~a~~l~~~~~~~~~~i~~~~g~t 99 (400)
+++++.|+.+.+..++++++++++.+.+.... ...|.+..+..++++. +++++ |.+ ++++++|+|
T Consensus 6 ~~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~----~~~--~v~~~~g~t 79 (371)
T 2e7j_A 6 TKDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL----GCD--VARVTNGAR 79 (371)
T ss_dssp --CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT----TSS--EEEEESSHH
T ss_pred CCCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc----CCC--EEEEeCChH
Confidence 56789999977677788999999999886531 1234456777888888 88876 554 999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEecc--CCCCCCCCCHHHHHHhhccC---CCCeEEEEeCCC
Q 015768 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGP--CSSKTLHPDADWLEKTLETK---PTPKLVSVVNPG 174 (400)
Q Consensus 100 ~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~e~l~~~l~~~---~~~~~v~l~~p~ 174 (400)
+|+..++.++.++||+|+++.|+|+++...++..|++++.+ | .+++ +.+|++++++.++.. ..+++|++++|+
T Consensus 80 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~ 157 (371)
T 2e7j_A 80 EAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALV-PKTDYPD-YAITPENFAQTIEETKKRGEVVLALITYPD 157 (371)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEE-CCCCTTT-CCCCHHHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEe-ecccCCC-CCcCHHHHHHHHHhhcccCCeEEEEEECCC
Confidence 99999999999999999999999999999999999999999 7 6544 578999999999721 235999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
||||.+++ +++|.++|++||+++|+|++|+.+... ......+.+++++|+||+++ ++.|+||++.+ ++++
T Consensus 158 nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~---~~~~~~~~di~~~s~sK~~~-~~~~~G~~~~~---~~~~ 227 (371)
T 2e7j_A 158 GNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP---VSLKEIGADFIVGSGHKSMA-ASGPIGVMGMK---EEWA 227 (371)
T ss_dssp TTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC---CCHHHHTCSEEEEEHHHHSS-CCSSCEEEEEC---TTTT
T ss_pred CCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC---CChhhcCCCEEEecCCcCCC-CCCCcEEEEEe---chhh
Confidence 99999999 799999999999999999999976532 11112245699999999997 45599999998 4555
Q ss_pred HH-HHHhhc--cC-----CcCccHHHHHHHHHHhcCCcHHHHHHHHHH--HHHHHHHHHHhccCCCCcccCCC--CceEE
Q 015768 255 TQ-LLKVQD--NI-----PICASIISQHLALYSLQTGPEWVTERVKDL--VRNREIIREALSPLGEGAVKGGE--GAIYL 322 (400)
Q Consensus 255 ~~-l~~~~~--~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~~~~--~~~~~ 322 (400)
++ +..... .. ..+++.....++..+++...+ +..+++ +++++++.+.|+++ ++.+..+. .+.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~ 303 (371)
T 2e7j_A 228 EIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE---RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLM 303 (371)
T ss_dssp TTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEE
T ss_pred hhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceE
Confidence 55 544332 11 345566666666666653111 556667 78889999999887 44655543 36688
Q ss_pred EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC------CCeEE-EEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768 323 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC------RGHLR-ISFGG--LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 323 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~------~~~iR-i~~~~--~~~~~~~~~~~~l~~~l~~~ 386 (400)
|++++ +..++...|. ++||.+.| ..+.. ++++| ++++. ++++++++++++|+++++++
T Consensus 304 ~~~~~----~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 304 FFHAE----VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp EEECH----HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEECC----CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 88886 4677888775 88999987 33322 68999 99985 58999999999999998753
No 98
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=2e-34 Score=273.64 Aligned_cols=326 Identities=10% Similarity=0.037 Sum_probs=252.5
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc-EEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (400)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~-i~~~~g~t~a~~~~~~~l~~~gd~vlv~ 119 (400)
+.++++++++++.+... ..| ......+.+++++++++.++.+.++ +++++|++++++.++.++.++||+|+++
T Consensus 21 p~~~~~~v~~a~~~~~~----~~~--~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~ 94 (411)
T 3nnk_A 21 PINADPRVLRAMSSQLI----GQY--DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVP 94 (411)
T ss_dssp CCCCCHHHHHHHTSCCC----CTT--CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCHHHHHHhhcccc----ccc--cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEe
Confidence 34567888887765432 112 2223456677777777777887665 7888999999999999999999999999
Q ss_pred CCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
.|+|++ +...++..|++++.+ |.+++ +.+|++++++.+++ ++ ++|++++|+||||.+.| +++|.++|++|
T Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 167 (411)
T 3nnk_A 95 VFGRFGHLLCEIARRCRAEVHTI-EVPWG-EVFTPDQVEDAVKRIRP--RLLLTVQGDTSTTMLQP---LAELGEICRRY 167 (411)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred cCCchHHHHHHHHHHcCCeEEEE-ecCCC-CCCCHHHHHHHHhhCCC--eEEEEeCCCCCcceecc---HHHHHHHHHHc
Confidence 999987 788889999999999 88654 46799999999985 54 99999999999999999 88999999999
Q ss_pred CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh---------------
Q 015768 197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ--------------- 261 (400)
Q Consensus 197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~--------------- 261 (400)
|+++|+|++++... .+......+.++++.|+||+++ ++.++|+++.+ +++++.+....
T Consensus 168 ~~~li~Dea~~~~~---~~~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~~gg~ 240 (411)
T 3nnk_A 168 DALFYTDATASLGG---NPLETDVWGLDAVSAGMQKCLG-GPSGTSPITLS---ARMEEAIRRRKCVEEGIRTDAHRDGD 240 (411)
T ss_dssp TCEEEEECTTTBTT---BCCCTTTTTCSEEECCSTTTTC-CCSSEEEEEEC---HHHHHHHHTTCCCCGGGCCTTCCCCS
T ss_pred CCEEEEECCcccCC---cccchhccCCcEEEecCccccC-CCCceEEEEEC---HHHHHHHhhccccccccccccccccc
Confidence 99999999987432 2222233457799999999864 34568999998 78888776543
Q ss_pred ---------------------ccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC--
Q 015768 262 ---------------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE-- 317 (400)
Q Consensus 262 ---------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-- 317 (400)
.....+.+...+.++..+++...++ +++..+++.++++++.+.|++++. .+..+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~ 319 (411)
T 3nnk_A 241 EEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGL-ETFGDLKH 319 (411)
T ss_dssp SCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBCSCGGG
T ss_pred CCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-EeCCCccc
Confidence 1123456777777777777643343 678888999999999999998754 544433
Q ss_pred -CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 318 -GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 318 -~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+.++++.++.. .+..++..+|++++||.+.+|.....++++||++ +. ++++++++++++|+++++++..
T Consensus 320 ~~~~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 392 (411)
T 3nnk_A 320 KMNNVLGVVIPQG-INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKF 392 (411)
T ss_dssp BCSSEEEEECCTT-CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccEEEEECCCC-CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 267888888753 3678899888766699999986655678999998 65 5899999999999999988654
No 99
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-35 Score=278.46 Aligned_cols=342 Identities=13% Similarity=0.041 Sum_probs=248.3
Q ss_pred HHHHHHhcC-CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC
Q 015768 21 QIQELVRGA-KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA 96 (400)
Q Consensus 21 ~~~~~~~~~-~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~ 96 (400)
++++.|-.- ++.+.|+.+.+. ++|+++++++.+.+.+.. ...|..........+++.+.+++.+|+++++|++|+
T Consensus 15 ~~r~~fp~~~~~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~ 93 (406)
T 3cai_A 15 RVRGLHPSLGDGWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGA 93 (406)
T ss_dssp HHHHTCTTTTSSCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEES
T ss_pred HHHHhhhhcCCCeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeC
Confidence 444445322 347888887766 678999999988886421 112321111123344444444444588888999999
Q ss_pred ChHHHHHHHHHHh---cCCCCEEEEeCCCccchhHHHHh----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEE
Q 015768 97 GANQAFVNIVLTL---CDAGDSVVMFAPYYFNSYMSFQM----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169 (400)
Q Consensus 97 g~t~a~~~~~~~l---~~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~ 169 (400)
|+|+++..++.++ .++||+|+++.|+|+++...+.. .|++++.+ |.+++++.+|++.+++.+++++ ++|+
T Consensus 94 g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~l~~~~--~~v~ 170 (406)
T 3cai_A 94 DRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWA-EVDIETGELPTWQWESLISKST--RLVA 170 (406)
T ss_dssp CHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEE-CCCTTTCCCCGGGHHHHCCTTE--EEEE
T ss_pred ChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEE-ecCcccCCcCHHHHHHHhCCCc--eEEE
Confidence 9999999999988 78999999999999987766544 69999999 8874445789999999997654 9999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeE-EEEccC
Q 015768 170 VVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPS 248 (400)
Q Consensus 170 l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G-~i~~~~ 248 (400)
+++|+||||.++| +++|.++|+++|+++|+|++|+.... +......+.+++++|+||++| ++ +| |++.+
T Consensus 171 ~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~~---~~~~~~~~~d~~~~s~~K~~g-~~--~G~~~~~~- 240 (406)
T 3cai_A 171 VNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPYR---LLDIRETDADVVTVNAHAWGG-PP--IGAMVFRD- 240 (406)
T ss_dssp EESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTTC---CCCHHHHCCSEEEEEGGGGTS-CS--CEEEEESC-
T ss_pred EeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCCC---CCCchhcCCCEEEeehhhhcC-CC--cCeEEEEe-
Confidence 9999999999999 88999999999999999999984321 111112346789999999886 54 88 99998
Q ss_pred CcHHHHHHHHHhhc---------cCCcCccHHHHHHHHHHhcCCcH---------------HHHHHHHHHHHHHHHHHHH
Q 015768 249 EVEGFATQLLKVQD---------NIPICASIISQHLALYSLQTGPE---------------WVTERVKDLVRNREIIREA 304 (400)
Q Consensus 249 ~~~~~~~~l~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~~~~~~~~~l~~~ 304 (400)
+++++++..... ....+++...+.++..+++...+ ++++..+++.++++++.+.
T Consensus 241 --~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 318 (406)
T 3cai_A 241 --PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVS 318 (406)
T ss_dssp --HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --hHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 677766654321 11344566665555555542111 5678888889999999999
Q ss_pred hccCCCCcccCCC--CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC------ccC---CCCeEEEEecc-CCHHHH
Q 015768 305 LSPLGEGAVKGGE--GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG------ACG---CRGHLRISFGG-LVEDDC 372 (400)
Q Consensus 305 L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~------~~~---~~~~iRi~~~~-~~~~~~ 372 (400)
|++++++.+..+. .+.++++.++. .+..++...|. ++||.+.+|. .++ ..+++||+++. ++++++
T Consensus 319 L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~L~-~~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i 395 (406)
T 3cai_A 319 LRSLPLVMLIGRPEAQIPVVSFAVHK--VPADRVVQRLA-DNGILAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEV 395 (406)
T ss_dssp HHTCTTEEECCCCSSBCSEEEEEETT--BCHHHHHHHHH-HTTEECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHH
T ss_pred HhcCCCeEEcCCccccCCEEEEEECC--cCHHHHHHHHH-HCCcEEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHH
Confidence 9987655555542 13367777764 35778888775 7899999987 333 24799999997 789999
Q ss_pred HHHHHHHHH
Q 015768 373 KAAADRLRR 381 (400)
Q Consensus 373 ~~~~~~l~~ 381 (400)
++++++|++
T Consensus 396 ~~~~~~l~~ 404 (406)
T 3cai_A 396 DQLVRALAS 404 (406)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999998875
No 100
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.4e-34 Score=272.06 Aligned_cols=323 Identities=17% Similarity=0.093 Sum_probs=247.5
Q ss_pred CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC--CcEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768 42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK--SSVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (400)
Q Consensus 42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~--~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~ 119 (400)
.++++++++++.+.+... + .....+..+++.+++++.+|.++ +++++|+|+++++. ++.++.++||+|+++
T Consensus 11 ~~~~~~v~~a~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~ 83 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVGF----T--SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVV 83 (384)
T ss_dssp SCCCHHHHHHTTCCSCCT----T--SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEE
T ss_pred CCCCHHHHHHhhcccccc----c--cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEe
Confidence 456788888887765432 1 12234556666666666668877 89999999999999 999999999999999
Q ss_pred CCCccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 120 APYYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 120 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
.|+|++ +...++..|++++.+ |.++++ .+|++.+++.+++.. +++|++++|+||||.+.| +++|.++|++||
T Consensus 84 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~-~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 157 (384)
T 3zrp_A 84 SNGVFGDRWEQIFKRYPVNVKVL-RPSPGD-YVKPGEVEEEVRKSE-YKLVALTHVETSTGVREP---VKDVINKIRKYV 157 (384)
T ss_dssp CSSHHHHHHHHHHTTSSCEEEEE-CCSTTC-CCCHHHHHHHHHHSC-EEEEEEESEETTTTEECC---HHHHHHHHGGGE
T ss_pred cCCcchHHHHHHHHHcCCcEEEe-cCCCCC-CCCHHHHHHHHHhCC-CcEEEEeCCCCCCceECc---HHHHHHHHHhcC
Confidence 999976 556667889999999 887654 689999999998632 499999999999999999 889999999999
Q ss_pred CEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH-------------HHhh---
Q 015768 198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL-------------LKVQ--- 261 (400)
Q Consensus 198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l-------------~~~~--- 261 (400)
+++|+|++++.... +......+.+++++|+||+++ ++.++|+++.+ +++++++ ....
T Consensus 158 ~~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (384)
T 3zrp_A 158 ELIVVDGVSSVGAE---EVKAEEWNVDVYLTASQKALG-SAAGLGLLLLS---PKALSILDSQNSIAGYYLDLRNWLPVM 230 (384)
T ss_dssp EEEEEECTTTTTTS---CCCTTTTTCSEEEEETTSTTC-CCSSEEEEEEC---HHHHHHHHHCCCSCCSTTCHHHHHHHH
T ss_pred CEEEEECcccccCc---cccccccCCCEEEecCccccc-CCCceEEEEEC---HHHHHHhcCCCCCCcccccHHHHHHHH
Confidence 99999999884332 222223457799999999985 34558999998 6776666 2211
Q ss_pred ------ccCCc-CccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCC
Q 015768 262 ------DNIPI-CASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEK 329 (400)
Q Consensus 262 ------~~~~~-~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~ 329 (400)
....+ +++...+.++..+++...++ ++++.++++++++++.+.|++++ +.+..+. .+.++++.++.
T Consensus 231 ~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~- 308 (384)
T 3zrp_A 231 RGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALG-LEIVARRPESYSNTVTGVILKV- 308 (384)
T ss_dssp HHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBSCSSGGGBCSSEEEEECSS-
T ss_pred HhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCC-CeEccCcccccCccEEEEECCC-
Confidence 11222 55666666666666642222 67888889999999999999884 4555554 46788888876
Q ss_pred CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 330 HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
.+..++...|. ++||.+.+|..+.. +++|++++. ++++++++++++|+++++++...
T Consensus 309 -~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 366 (384)
T 3zrp_A 309 -ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEP 366 (384)
T ss_dssp -SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred -CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCC
Confidence 46888998886 67999998874433 899999886 79999999999999999987643
No 101
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=2.4e-35 Score=277.33 Aligned_cols=325 Identities=17% Similarity=0.138 Sum_probs=242.8
Q ss_pred CCcHHHHHHHHHhhcCCCCC---CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc----CCCCE
Q 015768 43 QPPKMAMEKVKELVWDPSIS---KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAGDS 115 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~----~~gd~ 115 (400)
++|+.+++++.+.+.+.... .|....+.....+++.+++++.+|++++++++|+|+++|+..++.++. ++||+
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~ 90 (382)
T 4eb5_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKH 90 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCE
Confidence 57899999999988652111 132211223455556666666668888899999999999999999998 89999
Q ss_pred EEEeCCCccchhHHHH---hcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768 116 VVMFAPYYFNSYMSFQ---MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (400)
Q Consensus 116 vlv~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l 192 (400)
|+++.|+|+++...++ ..|++++.+ |.+++ +.+|++.+++.+++++ ++|++++|+||||.+++ +++|.++
T Consensus 91 Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~l 163 (382)
T 4eb5_A 91 ILVSAVEHMSVINPAKFLQKQGFEVEYI-PVGKY-GEVDVSFIDQKLRDDT--ILVSVQHANNEIGTIQP---VEEISEV 163 (382)
T ss_dssp EEEETTCCHHHHHHHHHHTTTTCEEEEE-CBCTT-SCBCHHHHHHHCCTTE--EEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred EEECCCcchHHHHHHHHHHhCCcEEEEe-ccCCC-CccCHHHHHHHhcCCC--eEEEEeccCCCccccCC---HHHHHHH
Confidence 9999999998877665 369999999 88754 4689999999997654 89999999999999999 8899999
Q ss_pred HHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh-------hccCC
Q 015768 193 CKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV-------QDNIP 265 (400)
Q Consensus 193 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~-------~~~~~ 265 (400)
|++||++ |+|++|+.. ..+......+.+++++|+||++|.+| +|+++.++ +. .+... .....
T Consensus 164 ~~~~~~~-i~D~a~~~g---~~~~~~~~~~~di~~~s~sK~~g~~g--~G~~~~~~---~~--~l~~~~~~~~~~~~~~~ 232 (382)
T 4eb5_A 164 LAGKAAL-HIDATASVG---QIEVDVEKIGADMLTISSNDIYGPKG--VGALWIRK---EA--KLQPVILGGGQENGLRS 232 (382)
T ss_dssp HTTSSEE-EEECTTTBT---TBCCCHHHHTCSEEEEETGGGTCCSS--CEEEEEET---TC--CCCCSSCSSCTGGGTSC
T ss_pred HHHCCCE-EEEcchhcC---CcccCccccCCCEEEeehHHhcCCCc--eEEEEEcc---cc--ccCceecCCCccccccC
Confidence 9999999 999999832 21111111246789999999987555 68888774 21 11111 11223
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEEeeCCCCCCCHHHHHHHHHH
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
.+++...+.++..+++...++++++.++++++++++.+.|++++++.+..+.+ +.++++.++. .+..++.+.|.
T Consensus 233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~- 309 (382)
T 4eb5_A 233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLD- 309 (382)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT--SCHHHHHHHHH-
T ss_pred CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCC--cCHHHHHHHHH-
Confidence 45566666666666654334567888889999999999999886555555431 4567777763 36788888875
Q ss_pred hcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 343 RHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 343 ~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
++||.+.+|..|.. ++++||+++. ++++++++++++|+++++++.+
T Consensus 310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999976532 4799999996 7899999999999999988765
No 102
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=5e-35 Score=276.54 Aligned_cols=327 Identities=14% Similarity=0.132 Sum_probs=248.0
Q ss_pred CCCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcCCCC
Q 015768 38 GVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGD 114 (400)
Q Consensus 38 ~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~gd 114 (400)
+.++.++++++++++.+.+.. .|.+. ....++++++++++ |.+++ ++++|+|+++++..++.++.++||
T Consensus 23 ~~~p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~----~~~~~~~v~~~~g~t~al~~~~~~~~~~gd 94 (396)
T 2ch1_A 23 GPGPSNCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF----QTENRATMCVSGSAHAGMEAMLSNLLEEGD 94 (396)
T ss_dssp SSSSCCCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH----TCCCSCEEEESSCHHHHHHHHHHHHCCTTC
T ss_pred cCCCCCCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh----CCCCCcEEEECCcHHHHHHHHHHHhcCCCC
Confidence 444556778888887665432 23221 12445566666555 77777 899999999999999999999999
Q ss_pred EEEEeCCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015768 115 SVVMFAPYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (400)
Q Consensus 115 ~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~ 191 (400)
+|+++.|+|+++. ..++..|++++.+ |.+++ +.+|++.+++.+++ ++ ++|++++|+||||.+++ +++|.+
T Consensus 95 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~---~~~i~~ 167 (396)
T 2ch1_A 95 RVLIAVNGIWAERAVEMSERYGADVRTI-EGPPD-RPFSLETLARAIELHQP--KCLFLTHGDSSSGLLQP---LEGVGQ 167 (396)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEE-ECCTT-SCCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHH
T ss_pred eEEEEcCCcccHHHHHHHHHcCCceEEe-cCCCC-CCCCHHHHHHHHHhCCC--CEEEEECCCCCCceecC---HHHHHH
Confidence 9999999999874 4678899999999 87654 56899999999986 55 99999999999999999 889999
Q ss_pred HHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----------
Q 015768 192 LCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---------- 261 (400)
Q Consensus 192 l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~---------- 261 (400)
+|+++|+++|+|++|+.. ..+......+.++++.|++|+++ ++.++|+++.+ +++++.+....
T Consensus 168 l~~~~~~~li~Dea~~~g---~~~~~~~~~~~d~~~~s~~K~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~ 240 (396)
T 2ch1_A 168 ICHQHDCLLIVDAVASLC---GVPFYMDKWEIDAVYTGAQKVLG-APPGITPISIS---PKALDVIRNRRTKSKVFYWDL 240 (396)
T ss_dssp HHHHTTCEEEEECTTTBT---TBCCCTTTTTCCEEECCCC-CCC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCGGGCH
T ss_pred HHHHcCCEEEEEcccccc---CCccchhhcCcCEEEEcCCcccc-CCCCeEEEEEC---HHHHHhhhhccCcccceEech
Confidence 999999999999999832 22222222345678899999875 34456999988 67777664310
Q ss_pred -------------ccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC----ceEEE
Q 015768 262 -------------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG----AIYLW 323 (400)
Q Consensus 262 -------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~~~~~ 323 (400)
.....+++...+.++..+++.. .+++++..++++++++++.+.|++++ +.+..+.+ +.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~ 319 (396)
T 2ch1_A 241 LLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMG-LDIFVKDPRHRLPTVTG 319 (396)
T ss_dssp HHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCBSSCSGGGBCTTEEE
T ss_pred HHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCC-CeeccCCccccCCceEE
Confidence 1123456777888777777642 23467788889999999999998884 45655543 24788
Q ss_pred eeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 324 ARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 324 ~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+.++.. .+..++..+|++++||.+.+|..+..++++||++ +. .+++++++++++|+++++++..
T Consensus 320 ~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 320 IMIPKG-VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp EECCTT-CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred EEcCCC-CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 888643 3678899888755699999988776789999999 53 5899999999999999988754
No 103
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=3.7e-35 Score=277.96 Aligned_cols=331 Identities=17% Similarity=0.143 Sum_probs=252.1
Q ss_pred cCCCeEEcCCCCCCCC--CcHHHHHHHHHhhcCCCCC----CCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChH
Q 015768 28 GAKNAVSLAQGVVYWQ--PPKMAMEKVKELVWDPSIS----KYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGAN 99 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~--~~~~v~~a~~~~~~~~~~~----~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t 99 (400)
+++++++|+.++ +++ +++++++++.+.+.+.... .|. ...+..++++++++++ |++ +. +++++++
T Consensus 43 ~g~~~id~~~~~-~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~-~~-i~~~sGs 115 (401)
T 1fc4_A 43 DGSHVINFCANN-YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----GME-DA-ILYSSCF 115 (401)
T ss_dssp TSCEEEECCCSC-TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----TCS-EE-EEESCHH
T ss_pred CCccEEEeeccC-cccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh----CCC-cE-EEeCChH
Confidence 567899999995 454 5899999998887641111 121 1344566777777776 665 44 5556668
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCC
Q 015768 100 QAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGN 175 (400)
Q Consensus 100 ~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~n 175 (400)
+++..++.++.++||.|+++.|+|.++...++..|++++.+ |. .|++++++.++.. ..+++|++++|+|
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~n 188 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRY-AN------NDMQELEARLKEAREAGARHVLIATDGVFS 188 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEE-CT------TCHHHHHHHHHHHHHTTCSSEEEEEESEET
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEE-CC------CCHHHHHHHHHHhhccCCCceEEEEeCCcC
Confidence 89999999999999999999999999888899999999988 62 3788999888641 0259999999999
Q ss_pred CCccCCCHHHHHHHHHHHHHcCCEEEEccccc-cccc-CCCCc---cccCCCcEEEEecccccc-CCCcceeEEEEccCC
Q 015768 176 PSGTYIPERLLKRISDLCKAAGSWLVVDNTYE-YFMY-DGRKH---CCVEGDHVVNLFSFSKAY-GMMGWRVGYIAYPSE 249 (400)
Q Consensus 176 ptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~-~~~~~---~~~~~~~~i~~~s~sK~~-g~~g~~~G~i~~~~~ 249 (400)
|||.+++ +++|.++|++||+++|+||+|+ ++.. .+... .....+.+++++|+||++ |..| ||++.+
T Consensus 189 ptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~-- 260 (401)
T 1fc4_A 189 MDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAAR-- 260 (401)
T ss_dssp TTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEEC--
T ss_pred CCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcC--
Confidence 9999999 8999999999999999999996 6543 23221 122235679999999999 4343 999998
Q ss_pred cHHHHHHHHHhh--ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCC
Q 015768 250 VEGFATQLLKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLP 327 (400)
Q Consensus 250 ~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 327 (400)
+++++.+.... ...+.+++.+.+.++..+++...+ .++..++++++++++.+.|++++. .+. +..++++|+.++
T Consensus 261 -~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~~~~~~~~~~~~ 336 (401)
T 1fc4_A 261 -KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA-GSELRDRLWANARQFREQMSAAGF-TLA-GADHAIIPVMLG 336 (401)
T ss_dssp -HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHTTC-CBC-CSSSSEEEEEEE
T ss_pred -HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-ccc-CCCCCEEEEEcC
Confidence 78888887644 223557888999988888874211 357778889999999999998853 555 445888898886
Q ss_pred CCCCCHHHHHHHHHHhcCeEEeCCCccCC---CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 328 EKHLDDFEVVRWLAHRHGVVVIPGGACGC---RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.. .+..++...|. ++||.+.++..|+. .+++||+++. ++++++++++++|+++++++
T Consensus 337 ~~-~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 337 DA-VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp CH-HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred Ch-HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 42 14567888776 67999999887753 4589999985 79999999999999998875
No 104
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=3.1e-34 Score=272.86 Aligned_cols=324 Identities=13% Similarity=0.125 Sum_probs=248.6
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEE-EeCChHHHHHHHHHHhcCCCCEEEEeCC
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVM-VTAGANQAFVNIVLTLCDAGDSVVMFAP 121 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~-~~~g~t~a~~~~~~~l~~~gd~vlv~~p 121 (400)
+.++.+++++.+ .....|. ....+..+++++++++.+|.+++.++ +++|+|+++..++.++.++||+|+++.|
T Consensus 21 ~~~~~v~~a~~~----~~~~~~~--~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~ 94 (416)
T 3isl_A 21 EVDPRVLRVMST----PVVGQFD--PAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIY 94 (416)
T ss_dssp CCCHHHHHHTTS----CCCCTTS--HHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CcCHHHHHHhcc----cCCCCcc--HHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecC
Confidence 345666655444 2222232 22356677788888888898877766 8899999999999999999999999999
Q ss_pred Cccc--hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCC
Q 015768 122 YYFN--SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGS 198 (400)
Q Consensus 122 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~ 198 (400)
+|++ +...++..|++++.+ |.++++ .+|++++++.++ +++ ++|++++|+||||.+.| +++|.++|++||+
T Consensus 95 ~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 167 (416)
T 3isl_A 95 GRFGYLLTEIAERYGANVHML-ECEWGT-VFDPEDIIREIKKVKP--KIVAMVHGETSTGRIHP---LKAIGEACRTEDA 167 (416)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CHHHHHHHHHTTC
T ss_pred CcccHHHHHHHHhcCCeeEEE-ecCCCC-CCCHHHHHHHHhhCCC--cEEEEEccCCCCceecC---HHHHHHHHHHcCC
Confidence 9988 667888999999999 887665 689999999998 455 99999999999999999 8899999999999
Q ss_pred EEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-----------------
Q 015768 199 WLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----------------- 261 (400)
Q Consensus 199 ~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----------------- 261 (400)
++|+|++++.... +......+.+++++|+||+++ ++.++|+++.+ +++++.+....
T Consensus 168 ~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~l~-g~~g~g~~~~~---~~~~~~~~~~~~~~~Gw~~~~~~~~~~g 240 (416)
T 3isl_A 168 LFIVDAVATIGGC---EVKVDEWKIDAAIGGTQKCLS-VPSGMAPITYN---ERVADVIAARKKVERGIATQADRAALSG 240 (416)
T ss_dssp EEEEECTTTTTTS---CCCTTTTTCSEEECCSSSTTC-CCSSEEEEEEC---HHHHHHHHTC------------------
T ss_pred EEEEECCccccCC---CcchhhcCCCEEEecCccccC-CCCCeEEEEEC---HHHHHHhhccccccccccccccchhccC
Confidence 9999999874322 222223457799999999863 34568999988 78877776321
Q ss_pred ---------------------ccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCCC-
Q 015768 262 ---------------------DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGEG- 318 (400)
Q Consensus 262 ---------------------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~- 318 (400)
.....+.+...+.++..+++...++ +++..+++.++++++.+.|++.+ +.+..+..
T Consensus 241 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~ 319 (416)
T 3isl_A 241 NRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMG-LRLFGDDSC 319 (416)
T ss_dssp CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCBCSCGGG
T ss_pred CCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCccc
Confidence 1123356777777777777653344 67888999999999999999874 35555532
Q ss_pred --ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHH-HHHHHHHHHHHHHHHhc
Q 015768 319 --AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDD-CKAAADRLRRGLEELVK 388 (400)
Q Consensus 319 --~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~-~~~~~~~l~~~l~~~~~ 388 (400)
+.++++.++.. .+..++.+.|.+++||.+.+|.....++++|++++. .++++ +++++++|+++++++..
T Consensus 320 ~~~~~~~~~~~~~-~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 392 (416)
T 3isl_A 320 KMPVVTCVEIPGG-IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHNA 392 (416)
T ss_dssp BCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCcEEEEeCCCC-CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcCC
Confidence 56788888643 368889998875569999998866668899999954 45555 99999999999998743
No 105
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=2.4e-34 Score=271.36 Aligned_cols=326 Identities=13% Similarity=0.104 Sum_probs=249.2
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (400)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~gd~vlv~ 119 (400)
+.++++++++++.+.... .+ ........+++++++++.++.+.+ ++++|+|+++++..++.++.++||+|+++
T Consensus 31 p~~~~~~v~~a~~~~~~~----~~--~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~ 104 (393)
T 3kgw_A 31 PSNLAPRVLAAGSLRMIG----HM--QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTG 104 (393)
T ss_dssp CCCCCHHHHHHTTCCCCC----TT--SHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCHHHHHHhcccccC----cc--cHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEE
Confidence 445678888877664322 12 122345566667777777787654 59999999999999999999999999999
Q ss_pred CCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 120 APYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 120 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
.++|++. ...++..|.+++.+ |.++++ .+|++++++.+++ ++ ++|++++|+||||.+.+ +++|.++|++|
T Consensus 105 ~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~d~~~l~~~i~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 177 (393)
T 3kgw_A 105 TNGIWGMRAAEIADRIGARVHQM-IKKPGE-HYTLQEVEEGLAQHKP--VLLFLVHGESSTGVVQP---LDGFGELCHRY 177 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEE-ECCTTC-CCCHHHHHHHHHHHCC--SEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred eCCchhHHHHHHHHHcCCceEEE-eCCCCC-CCCHHHHHHHHhhCCC--cEEEEeccCCcchhhcc---HHHHHHHHHHc
Confidence 9988643 56778899999999 887665 6899999999986 55 99999999999999999 88999999999
Q ss_pred CCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc--------------
Q 015768 197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-------------- 262 (400)
Q Consensus 197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~-------------- 262 (400)
|+++|+|++|+.. .........+.++++.|+||+++ ++.++|+++.+ +++++.+.....
T Consensus 178 ~~~li~De~~~~g---~~~~~~~~~~~d~~~~s~sK~~~-~~~g~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (393)
T 3kgw_A 178 QCLLLVDSVASLG---GVPIYMDQQGIDIMYSSSQKVLN-APPGISLISFN---DKAKYKVYSRKTKPVSFYTDITYLAK 250 (393)
T ss_dssp TCEEEEECTTTTT---TSCCCTTTTTCCEEEEESSSTTC-CCSSCEEEEEC---HHHHHHHHTCSSCCSCSTTCHHHHHH
T ss_pred CCEEEEECCcccc---CcccchhhcCCCEEEecCccccc-CCCceeEEEEC---HHHHHHHhccCCCCCceeecHHHHHH
Confidence 9999999998733 22222233456788999999884 34458999998 788888765321
Q ss_pred ---------cCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCceEEEeeCCC
Q 015768 263 ---------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWARLPE 328 (400)
Q Consensus 263 ---------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~~ 328 (400)
...++.+...+.++..+++... .++++..+++.++++++.+.|++++. .+..+ ..+.++++.++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~ 329 (393)
T 3kgw_A 251 LWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGL-KFFVKDPEIRLPTITTVTVPA 329 (393)
T ss_dssp HTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBSSSSGGGBCSSEEEEECCT
T ss_pred hhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC-eeccCChhhcCCeEEEEeCCC
Confidence 1134567777777777766422 23678888999999999999998854 54422 235677788875
Q ss_pred CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 329 KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 329 ~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.. +..++..+|++++||.+.+|..+..++++|+++ +. .+++++++++++|+++++++.+
T Consensus 330 ~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 330 GY-NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp TB-CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred CC-CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 43 678899888755599999998777789999998 65 5899999999999999988654
No 106
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=1.2e-35 Score=280.12 Aligned_cols=337 Identities=15% Similarity=0.078 Sum_probs=246.7
Q ss_pred HHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC-CC-----CCCC-CCCcHHHHHHHHHHHHhhcCCCCCcEEE
Q 015768 22 IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS-IS-----KYGA-DEGLPELRDALVKKLNQENKLYKSSVMV 94 (400)
Q Consensus 22 ~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~-----~y~~-~~g~~~~~~~~a~~l~~~~~~~~~~i~~ 94 (400)
+++.|.-.++.+.|+.+.. .+.|+.+++++.+.+.+.. .. .|+. ..+..++++.+++++ |++++++++
T Consensus 7 ~r~~f~~~~~~i~l~~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~----g~~~~~v~~ 81 (390)
T 1elu_A 7 SLHQFPGLANKTYFNFGGQ-GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF----NVDPNTITI 81 (390)
T ss_dssp ---CCGGGTTSEECCTTTC-CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT----TSCGGGEEE
T ss_pred HHHhcCCCCCeEEecCCcc-CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc----CCCHHHEEE
Confidence 3344444467899988763 3567889999988876421 01 2321 134556666666665 788889999
Q ss_pred eCChHHHHHHHHHHh-cCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCC-CCCCCCHHHHHHhhccCCCCeEE
Q 015768 95 TAGANQAFVNIVLTL-CDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS-KTLHPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 95 ~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~-~~~~~~~e~l~~~l~~~~~~~~v 168 (400)
|+|+++++..++.++ .++||+|+++.|+|+++... .+..|++++.+ |.++ +++.+|++.+++.+++++ ++|
T Consensus 82 ~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~~d~~~l~~~i~~~~--~~v 158 (390)
T 1elu_A 82 TDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFF-PVAATLNQGDAAAVLANHLGPKT--RLV 158 (390)
T ss_dssp ESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEE-CCGGGSSSSCHHHHHHTTCCTTE--EEE
T ss_pred eCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEE-cCCCCCCccchHHHHHHhcCCCc--eEE
Confidence 999999999999999 79999999999999987654 46679999999 8753 345789999999987654 999
Q ss_pred EEeCCCCCCccCCCHHHHHHHHHHHH----HcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEE
Q 015768 169 SVVNPGNPSGTYIPERLLKRISDLCK----AAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI 244 (400)
Q Consensus 169 ~l~~p~nptG~~~~~~~l~~i~~l~~----~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i 244 (400)
++++|+||||.++| +++|.++|+ +||+++|+|++|+.+. .+......+.+++++|+||++. +|.++||+
T Consensus 159 ~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~---~~~~~~~~~~d~~~~s~~K~~~-~~~g~G~~ 231 (390)
T 1elu_A 159 ILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS---LPLDFSRLEVDYYAFTGHKWFA-GPAGVGGL 231 (390)
T ss_dssp EEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT---BCCCTTTSCCSEEEEESSSTTC-CCTTCEEE
T ss_pred EEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC---cCCChhhcCCCEEEcccccccc-CCCceEEE
Confidence 99999999999999 899999999 9999999999998432 2222223456799999999553 56678999
Q ss_pred EccCCcHHHHHHHHHhh----------------------ccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHH
Q 015768 245 AYPSEVEGFATQLLKVQ----------------------DNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREI 300 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~ 300 (400)
+.+ +++++.+.... .....+++.+.+.++..+++.. .++++++.+++++++++
T Consensus 232 ~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~ 308 (390)
T 1elu_A 232 YIH---GDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEF 308 (390)
T ss_dssp EEC---TTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred EEC---HHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 998 55555544311 1123355666666666665531 12367888899999999
Q ss_pred HHHHhccCCCCcccCC--CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768 301 IREALSPLGEGAVKGG--EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD 377 (400)
Q Consensus 301 l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~ 377 (400)
+.+.|++++++.+..| ..+.+++++++.. .+..++..+|. ++||.+.+|. .++++||+++. .++++++++++
T Consensus 309 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~-~~gi~v~~~~---~~~~iRis~~~~~~~~~i~~~~~ 383 (390)
T 1elu_A 309 LWRGLNQLPHVHCLATSAPQAGLVSFTVDSP-LGHRAIVQKLE-EQRIYLRTIA---DPDCIRACCHYITDEEEINHLLA 383 (390)
T ss_dssp HHHHHHHSTTEEESCSSCCSSSEEEEEECSS-SCHHHHHHHHH-HTTEECEEET---TTTEEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHhcCCcEEecCccccccEEEEEcCCC-CCHHHHHHHHH-HCCEEEEecC---CCCeEEEecccCCCHHHHHHHHH
Confidence 9999998855455532 1244555577643 36778888885 7899999876 46899999965 79999999998
Q ss_pred HHHH
Q 015768 378 RLRR 381 (400)
Q Consensus 378 ~l~~ 381 (400)
+|++
T Consensus 384 ~l~~ 387 (390)
T 1elu_A 384 RLAD 387 (390)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 8865
No 107
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=4.7e-35 Score=275.01 Aligned_cols=326 Identities=18% Similarity=0.149 Sum_probs=243.8
Q ss_pred CCcHHHHHHHHHhhcCCCCC---CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc----CCCCE
Q 015768 43 QPPKMAMEKVKELVWDPSIS---KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC----DAGDS 115 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~----~~gd~ 115 (400)
++|+.+++++.+.+.+.... .|....+..++.+++.+++++.+|++++++++++|+++++..++.++. ++||+
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~ 90 (382)
T 4hvk_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKH 90 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCE
Confidence 56789999999988652111 121122335666777777777779888999999999999999999998 89999
Q ss_pred EEEeCCCccchhHHHHh---cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768 116 VVMFAPYYFNSYMSFQM---TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (400)
Q Consensus 116 vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l 192 (400)
|+++.++|+++...++. .|++++.+ |.++++ .+|++++++.+++++ ++|++++|+||||.+.+ +++|.++
T Consensus 91 vi~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~-~~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---~~~i~~l 163 (382)
T 4hvk_A 91 ILVSAVEHMSVINPAKFLQKQGFEVEYI-PVGKYG-EVDVSFIDQKLRDDT--ILVSVQHANNEIGTIQP---VEEISEV 163 (382)
T ss_dssp EEEETTCCHHHHHHHHHHHHTTCEEEEE-CBCTTS-CBCHHHHHHHCCTTE--EEEECCSBCTTTCBBCC---HHHHHHH
T ss_pred EEECCCCcHHHHHHHHHHHhcCCEEEEe-ccCCCC-CcCHHHHHHHhccCc--eEEEEECCCCCceeeCC---HHHHHHH
Confidence 99999999988875544 69999999 887554 789999999998765 99999999999999999 8899999
Q ss_pred HHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-------ccCC
Q 015768 193 CKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-------DNIP 265 (400)
Q Consensus 193 ~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-------~~~~ 265 (400)
|++||+ +|+|++|+.... +......+.+++++|+||.+|.+| +|+++.+++ . .+.... ....
T Consensus 164 ~~~~~~-li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~g~~g--~g~~~~~~~---~--~~~~~~~~~~~~~~~~~ 232 (382)
T 4hvk_A 164 LAGKAA-LHIDATASVGQI---EVDVEKIGADMLTISSNDIYGPKG--VGALWIRKE---A--KLQPVILGGGQENGLRS 232 (382)
T ss_dssp HSSSSE-EEEECTTTBTTB---CCCHHHHTCSEEEEESGGGTSCTT--CEEEEEETT---C--CCCCSSCSSCTGGGTSC
T ss_pred HHHcCE-EEEEhHHhcCCC---CCCchhcCCCEEEEeHHHhcCCCc--eEEEEEcCc---c--CcCcccccCCCcCcccc
Confidence 999999 999999874322 111112346799999999887555 677666632 1 111111 1123
Q ss_pred cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEEEeeCCCCCCCHHHHHHHHHH
Q 015768 266 ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 266 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
.+.+...+.++..++....+++++..++++++++++.+.|++++++.+..+.. ..++++.++. .+.+++...|.
T Consensus 233 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~- 309 (382)
T 4hvk_A 233 GSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSY--IEGESIVLSLD- 309 (382)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETT--CCHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECC--CCHHHHHHHHH-
Confidence 44567777777777664345678888999999999999999887656555432 3466666653 36778888775
Q ss_pred hcCeEEeCCCccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 343 RHGVVVIPGGACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 343 ~~gi~v~~g~~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
++||.+.+|..|.. ++++|++++. ++++++++++++|+++++++.+.
T Consensus 310 ~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 310 MAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSM 376 (382)
T ss_dssp HTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 78999999976642 5789999997 78999999999999999987654
No 108
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=8.4e-35 Score=271.82 Aligned_cols=329 Identities=16% Similarity=0.118 Sum_probs=248.4
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC--CCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHH
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA--DEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~ 107 (400)
.++|+.| +.+.|+++++++.+.+. ..|+. ..+..++++.+++++ |.+ ++++++|+|+++|+..++.
T Consensus 5 ~~~~~~g--p~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~~~g~t~a~~~~~~ 74 (366)
T 1m32_A 5 YLLLTPG--PLTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALA----TASEGYTSVLLQGSGSYAVEAVLG 74 (366)
T ss_dssp CEECSSS--SCCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHH----CSSSSEEEEEEESCHHHHHHHHHH
T ss_pred cccccCC--CcCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHh----CCCCcCcEEEEecChHHHHHHHHH
Confidence 5788888 45678999988877532 11211 156788888888887 422 3579999999999999999
Q ss_pred HhcCCCCEEEEeC-CCccc-hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 108 TLCDAGDSVVMFA-PYYFN-SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 108 ~l~~~gd~vlv~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
++.++||+|++.. ++|.. +...++..|++++.+ |.+++ +.+|++.+++.+++++.+++|++++++||||.++|
T Consensus 75 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~--- 149 (366)
T 1m32_A 75 SALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAY-DCGEV-ARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP--- 149 (366)
T ss_dssp HSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEE-ECCTT-SCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---
T ss_pred HhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEE-eCCCC-CCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC---
Confidence 9999999988776 55554 456778889999999 87654 46899999999986433589999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---- 261 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~---- 261 (400)
+++|.++|++||+++|+|++|+.+.. +......+.+++++|+||+++ ++.++||++.+ +++++++....
T Consensus 150 l~~i~~l~~~~~~~li~Dea~~~~~~---~~~~~~~~~di~~~s~~K~~~-~~~g~G~~~~~---~~~~~~~~~~~~~~~ 222 (366)
T 1m32_A 150 IDEVGALAHRYGKTYIVDAMSSFGGI---PMDIAALHIDYLISSANKCIQ-GVPGFAFVIAR---EQKLAACKGHSRSLS 222 (366)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTS---CCCTTTTTCSEEEEESSSTTC-CCSSEEEEEEE---HHHHTTCTTCCSCST
T ss_pred HHHHHHHHHHcCCEEEEECCccccCc---CccccccCccEEEecCccccc-CCCceEEEEEC---HHHHHhhcCCCCCcc
Confidence 88999999999999999999985432 121222356799999999884 33457999998 66665543311
Q ss_pred --------------ccCCcCccHHHHHHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHHhccCCCCcccCC---CCceEE
Q 015768 262 --------------DNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKGG---EGAIYL 322 (400)
Q Consensus 262 --------------~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~---~~~~~~ 322 (400)
....++++.+.+.++..+++...++ +++..++++++++++.+.|++++ +.+..+ .+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~ 301 (366)
T 1m32_A 223 LDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALG-FNTLLDDELHSPIIT 301 (366)
T ss_dssp TCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTT-CCBSSCGGGBCSSEE
T ss_pred ccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCC-CeeccCchhcCceEE
Confidence 1113567778887777777653333 56788889999999999998874 355443 356788
Q ss_pred EeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 323 WARLPEK-HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 323 ~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
|+.++.. ..+..++.++|. ++||.+.+|..| .++++|++++. ++++++++++++|++++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 364 (366)
T 1m32_A 302 AFYSPEDPQYRFSEFYRRLK-EQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAMYW 364 (366)
T ss_dssp EEECCCCTTCCHHHHHHHHH-HTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred EEEcCccCCCCHHHHHHHHH-HCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 9998741 236788888886 679999998876 57899999997 6899999999999988654
No 109
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2.8e-34 Score=271.68 Aligned_cols=326 Identities=19% Similarity=0.178 Sum_probs=240.7
Q ss_pred HHHhcCC-CeEEcCCCCCCCCCcHHHHHHHHHhhc---C-CCCCCCCCCCCcH---HHHHHHHHHHHhhcCCCCCcEEEe
Q 015768 24 ELVRGAK-NAVSLAQGVVYWQPPKMAMEKVKELVW---D-PSISKYGADEGLP---ELRDALVKKLNQENKLYKSSVMVT 95 (400)
Q Consensus 24 ~~~~~~~-~~i~~~~~~~~~~~~~~v~~a~~~~~~---~-~~~~~y~~~~g~~---~~~~~~a~~l~~~~~~~~~~i~~~ 95 (400)
+....+. +...++.+.|+++.++.+.+++.+... + .....|+. .+.+ ++++++++++ |. ++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~----g~--~~~i~~ 83 (404)
T 1e5e_A 11 ACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE----KT--EACVAT 83 (404)
T ss_dssp HHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH----TC--SEEEEE
T ss_pred eeeecCCCCCCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh----CC--CcEEEe
Confidence 3344443 234678888999877766665554443 2 22445654 4554 6777777776 54 378888
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe
Q 015768 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV 171 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~ 171 (400)
+|+++|+..++.++.++||+|+++.|+|+++.. .++..|++++.+ |.+ |++++++.+++++ ++|+++
T Consensus 84 ~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~l~~~i~~~t--~~v~l~ 154 (404)
T 1e5e_A 84 SSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFI-NTA------IPGEVKKHMKPNT--KIVYFE 154 (404)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CTT------STTHHHHHCCTTE--EEEEEE
T ss_pred CChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-CCC------CHHHHHHhcCCCC--cEEEEE
Confidence 888999999999999999999999999999888 678899999998 764 6788999987655 999999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee-EEEEccCC
Q 015768 172 NPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSE 249 (400)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~-~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-G~i~~~~~ 249 (400)
+|+||||.+++ +++|.++|++ +|+++|+|++|..+.+.. +. ..+.++++.|+||+++++|+|+ ||++.+
T Consensus 155 ~p~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~-~~---~~~~di~~~S~sK~~~~~g~ri~G~~~~~-- 225 (404)
T 1e5e_A 155 TPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN-PV---DFGVDVVVHSATKYINGHTDVVAGLICGK-- 225 (404)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC-GG---GGTCSEEEEETTTTTTCSSCCCCEEEEEC--
T ss_pred CCCCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC-cc---ccCCEEEEEcCccccCCCCCCeEEEEEEC--
Confidence 99999999999 9999999999 999999999999876542 21 2467899999999999899997 999998
Q ss_pred cHHHHH-HHHHhhccC-CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC--------------CCcc
Q 015768 250 VEGFAT-QLLKVQDNI-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--------------EGAV 313 (400)
Q Consensus 250 ~~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~ 313 (400)
+++++ ++....... ..+.+++.+.++..+++. ...+.++..++.+.+.+.|++.+ ...+
T Consensus 226 -~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~ 300 (404)
T 1e5e_A 226 -ADLLQQIRMVGIKDITGSVISPHDAWLITRGLST----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDI 300 (404)
T ss_dssp -HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHH
T ss_pred -HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHH
Confidence 67776 787766544 456788888888888875 34455555666666666666543 1112
Q ss_pred cCC----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC---------------------------CCeEEE
Q 015768 314 KGG----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC---------------------------RGHLRI 362 (400)
Q Consensus 314 ~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------------~~~iRi 362 (400)
..+ .++++.| +++. ..+....++++.|| +.+|..|++ ++++||
T Consensus 301 ~~~~~~~~g~~~~~-~~~~----~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRi 374 (404)
T 1e5e_A 301 AKKQMRMYGSMITF-ILKS----GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRL 374 (404)
T ss_dssp HHHHCSSCCSEEEE-EETT----HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEE
T ss_pred HHhhCCCCceEEEE-EeCC----CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence 222 2455555 7763 22334446678899 444443321 579999
Q ss_pred EeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 363 SFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 363 ~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
|++. |++++++++|++++....+
T Consensus 375 s~g~---e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 375 SVGI---EDADELIADFKQGLDALLR 397 (404)
T ss_dssp ECCS---SCHHHHHHHHHHHHHHHHC
T ss_pred EeCC---CCHHHHHHHHHHHHHHHHH
Confidence 9996 8899999999999987765
No 110
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=6e-35 Score=276.55 Aligned_cols=332 Identities=13% Similarity=0.070 Sum_probs=244.9
Q ss_pred CCCeEEcCCCCC-CCCCcHHHHHHHHHhhcCCC------CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHH
Q 015768 29 AKNAVSLAQGVV-YWQPPKMAMEKVKELVWDPS------ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQA 101 (400)
Q Consensus 29 ~~~~i~~~~~~~-~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a 101 (400)
|+++++|..+.+ +++.+|++++++.+.+.+.. ...|+...+..++++++++++ |. ++++++++|++ +
T Consensus 45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~-~~~i~~~sG~~-a 118 (401)
T 2bwn_A 45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH----QK-EAALVFSSAYN-A 118 (401)
T ss_dssp EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT----TC-SEEEEESCHHH-H
T ss_pred CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh----CC-CcEEEECCcHH-H
Confidence 456788887664 55567789999988886411 122444445677777777776 54 57777777665 7
Q ss_pred HHHHHHHhc--CCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCC
Q 015768 102 FVNIVLTLC--DAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS 177 (400)
Q Consensus 102 ~~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~npt 177 (400)
+..++.++. .+||+|+++.|+|+++...++..|++++.+ |.+ |++++++.++.. ..+++|++++|+|||
T Consensus 119 ~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~le~~l~~~~~~~~~~v~~~~~~npt 191 (401)
T 2bwn_A 119 NDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIF-RHN------DVAHLRELIAADDPAAPKLIAFESVYSMD 191 (401)
T ss_dssp HHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEE-CTT------CHHHHHHHHHHSCTTSCEEEEEESBCTTT
T ss_pred HHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEE-cCC------CHHHHHHHHHhhccCCceEEEEecCcCCC
Confidence 777777664 589999999999999999999999999988 754 688888888621 235899999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCC--CCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~ 252 (400)
|.++| +++|.++|++||+++|+|++|+.+.++. .... ......+++++|+||.+|++| ||++.+ ++
T Consensus 192 G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~---~~ 262 (401)
T 2bwn_A 192 GDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS---AR 262 (401)
T ss_dssp CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC---HH
T ss_pred CCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC---HH
Confidence 99999 8999999999999999999999554432 1111 111134688999999998777 999987 77
Q ss_pred HHHHHHHhhc--cCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768 253 FATQLLKVQD--NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEK 329 (400)
Q Consensus 253 ~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 329 (400)
+.+.+..... ....+.+++.+.++..+++... ..+++..++++++++++.+.|++++ +.+..+.+ .++|+.++..
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~-~~~~~~~~~~ 340 (401)
T 2bwn_A 263 MVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALG-MPIIDHGS-HIVPVVIGDP 340 (401)
T ss_dssp HHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHT-CCBCCCSS-SCEEEECCCH
T ss_pred HHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC-CcccCCCC-CeEEEEeCCh
Confidence 7777764322 1222334577776677776422 2246778888999999999998874 46666664 4788888742
Q ss_pred CCCHHHHHHHHHHhcCeEEeCCCccCCC---CeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 330 HLDDFEVVRWLAHRHGVVVIPGGACGCR---GHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 330 ~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.+..++..+|++++||.+.|+..++.+ +++|++++. ++++++++++++|++++++
T Consensus 341 -~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 341 -VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp -HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred -HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 245678887765789999998876533 589999996 7999999999999988765
No 111
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=3e-35 Score=277.72 Aligned_cols=327 Identities=13% Similarity=0.134 Sum_probs=243.7
Q ss_pred cCCCeEEcCCCCCCCC---CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQ---PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~---~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+++.++||+.+.+... .+|++++++.+.+.+.... ...+..+..+++++++++.+| ++++++++|+++|++.
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~~~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~ 108 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLT---SRAFHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVET 108 (392)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCC---CTTSEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHH
T ss_pred CCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcccc---ccccCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHH
Confidence 5678999998764433 6899999999988764211 111223344455555555556 7899999999999999
Q ss_pred HHHHhcCC----------CCEEEEeCCCccchhHHHHhcCcE-------------EEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 105 IVLTLCDA----------GDSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 105 ~~~~l~~~----------gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
++.++..+ +|+|++..|+|++........+.. +..+ +. .|++++++.+++
T Consensus 109 al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~ 181 (392)
T 3ruy_A 109 AIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI-PY------GDLEALKAAITP 181 (392)
T ss_dssp HHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEE-CT------TCHHHHHHHCCT
T ss_pred HHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeee-Cc------ccHHHHHHHhcc
Confidence 99987644 689999999998877665444322 3333 22 179999999985
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHH-HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-c
Q 015768 162 KPTPKLVSVVNPGNPSGTYIPERL-LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-W 239 (400)
Q Consensus 162 ~~~~~~v~l~~p~nptG~~~~~~~-l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~ 239 (400)
+ +++|++++|+||||.+++.++ +++|.++|++||+++|+||+|.++...+........+....+.++||.++ +| +
T Consensus 182 ~--~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~-gG~~ 258 (392)
T 3ruy_A 182 N--TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALG-GGVF 258 (392)
T ss_dssp T--EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGG-TTTS
T ss_pred C--eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhh-CChh
Confidence 5 499999999999999996555 99999999999999999999987766544332221111111236789986 56 9
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--CcccCCC
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKGGE 317 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~ 317 (400)
|+||++.+ +++++.+.......+++.+++.+.++..+++.. +. ++..++++++++++.+.|++++. +....+.
T Consensus 259 ~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 333 (392)
T 3ruy_A 259 PISCAAAN---RDILGVFEPGSHGSTFGGNPLACAVSIAALEVL-EE-EKLTERSLQLGEKLVGQLKEIDNPMITEVRGK 333 (392)
T ss_dssp CCEEEEEC---HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH-HH-TTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEE
T ss_pred hhEEEEEC---HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH-Hh-hhHHHHHHHHHHHHHHHHHHhcCCCceEEEee
Confidence 99999998 788777776666678889999999999998852 22 56778888999999999998753 3334444
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+.++++.++. +..++...|. ++||.+.||. ++++|++++. .+++++++++++|++++
T Consensus 334 -g~~~~~~~~~---~~~~l~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 334 -GLFIGIELNE---PARPYCEQLK-AAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp -TTEEEEEESS---CSHHHHHHHH-TTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred -eeEEEEEEcc---hHHHHHHHHH-HCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 5566666764 5678888886 8999999864 7899999776 79999999999999876
No 112
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=7.5e-34 Score=264.48 Aligned_cols=332 Identities=14% Similarity=0.123 Sum_probs=241.3
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
.+++|+|+.+.+ .++++++++++.+.... ....|+ .....+++++++++.+| +++++++++|+++++..++.+
T Consensus 6 ~~~~id~~~~~~-~~~~~~v~~a~~~~~~~-~~~~~~----~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~ 78 (356)
T 1v72_A 6 RPPALGFSSDNI-AGASPEVAQALVKHSSG-QAGPYG----TDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSA 78 (356)
T ss_dssp CCCCCBCSCGGG-CCCCHHHHHHHHHTTSS-CCCSTT----CSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHT
T ss_pred CCceEeeccCCc-cCCCHHHHHHHHhhccC-cccccc----cchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHH
Confidence 367899998743 46789999999887632 123343 34566666777766667 445699999999999999999
Q ss_pred hcCCCCEEEEeCCCccchhHH--HHhc--CcEEEEeccCCCCCCCCCHHHHHH-hhccC-----CCCeEEEEeCCCCCCc
Q 015768 109 LCDAGDSVVMFAPYYFNSYMS--FQMT--GVTHILVGPCSSKTLHPDADWLEK-TLETK-----PTPKLVSVVNPGNPSG 178 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~~~e~l~~-~l~~~-----~~~~~v~l~~p~nptG 178 (400)
+.++||+|+++.|+|++.... ++.. |.+++.+ |.++ +.+|++++++ .+++. ..+++|++++|+| ||
T Consensus 79 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~--~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG 154 (356)
T 1v72_A 79 MTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV-DGPA--AKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VG 154 (356)
T ss_dssp SCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC-CCGG--GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TS
T ss_pred hcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEe-cCCC--CeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CC
Confidence 999999999999999887765 7777 9999988 7653 4689999999 88751 1358999999886 99
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEccccccccc--CCCCcccc--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCV--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
.+++.+++++|.++|++||+++|+|++|..+.. .+...... ..+.++++.|+||+ |. ...+||++.+ ++++
T Consensus 155 ~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~-~~G~g~~~~~---~~~~ 229 (356)
T 1v72_A 155 SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GV-LAAEAIVLFN---TSLA 229 (356)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TC-SSCEEEEESS---GGGH
T ss_pred ccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CC-cCccEEEEEC---HHHH
Confidence 999999999999999999999999999986432 12111111 12344667799998 53 3444588887 6777
Q ss_pred HHHHHhhccCC-c-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC
Q 015768 255 TQLLKVQDNIP-I-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD 332 (400)
Q Consensus 255 ~~l~~~~~~~~-~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (400)
+++........ . ..+......+...++. +...+..+++.++++++.+.|++++++.+..+.+++++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~----- 302 (356)
T 1v72_A 230 TEMSYRRKRAGHLSSKMRFLSAQIDAYLTD--DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD----- 302 (356)
T ss_dssp HHHHHHHHHTTCCCSSTHHHHHHHHHHTST--THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----
T ss_pred hhHHHHhhccCchhhhHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----
Confidence 66654432111 1 1122333334455543 2234566777888999999999876556655666888998875
Q ss_pred HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 333 DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.+++.+|. ++||.+.+|. |+ ++++|++++. ++++++++++++|++++++..
T Consensus 303 -~~~~~~l~-~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 303 -SAMIDALL-KAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp -HHHHHHHH-HTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred -HHHHHHHH-hcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 26787775 7899999887 54 7899999876 789999999999999876643
No 113
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=3.8e-34 Score=271.51 Aligned_cols=352 Identities=15% Similarity=0.119 Sum_probs=257.0
Q ss_pred chHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCC---CcHH--HHHH-HHHHHHhhcCCCC
Q 015768 16 MPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADE---GLPE--LRDA-LVKKLNQENKLYK 89 (400)
Q Consensus 16 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~~~--~~~~-~a~~l~~~~~~~~ 89 (400)
...+..+.+..+.+.++++|+.+.+++ ++++++++.+.+.+.....|+... |.+. ..+. ..+++++.+|.++
T Consensus 9 ~~i~~~~~~~~~~~~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~ 86 (407)
T 2dkj_A 9 EALFELIALEEKRQREGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAW 86 (407)
T ss_dssp HHHHHHHHHHHHHHHTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHhhcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence 345566666666667899999999877 899999999988642233443221 4433 3333 3356777778776
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHhcCc--EEEEeccCCCCCCCCCHHHHHHhhcc-CC
Q 015768 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGV--THILVGPCSSKTLHPDADWLEKTLET-KP 163 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~--~~~~~~~~~~~~~~~~~e~l~~~l~~-~~ 163 (400)
+++++++| ++|+..++.++.++||+|+++.|+|+++. ..++..|. .++.+ +.+++++.+|++.+++.++. ++
T Consensus 87 ~~i~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~ 164 (407)
T 2dkj_A 87 ANVQPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSY-GVRPDTELIDLEEVRRLALEHRP 164 (407)
T ss_dssp EECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEE-CCCTTTSSCCHHHHHHHHHHHCC
T ss_pred ceEEecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEec-CCCcccCccCHHHHHHHHhhcCC
Confidence 55555555 56999999999999999999999998883 44555565 55555 55544567899999999974 54
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-cccCCCCccccCCCcEEEEeccccccCCCcceeE
Q 015768 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-FMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG 242 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G 242 (400)
++|++++|+|| ...+ +++|.++|++||+++|+|++|+. +...+....... ..+++++|+||++ +|.|+|
T Consensus 165 --~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l--~g~~~G 234 (407)
T 2dkj_A 165 --KVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTL--RGPRGG 234 (407)
T ss_dssp --SEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGG--CCCSCE
T ss_pred --eEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccC--CCCCce
Confidence 89999889997 6677 89999999999999999999997 444432221111 3678899999976 477889
Q ss_pred EEEccCCcHHHHHHHHHhhccCC-cCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCCc
Q 015768 243 YIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA 319 (400)
Q Consensus 243 ~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~ 319 (400)
|+++++ +++++.+........ .+++.....++..+++.. .+++++..++++++++++.+.|++++ +.+.. +..+
T Consensus 235 ~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 311 (407)
T 2dkj_A 235 LILSND--PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG-YRIVTGGTDN 311 (407)
T ss_dssp EEEESC--HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSS
T ss_pred EEEECC--HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC-ceeecCCCCc
Confidence 999885 577777776554333 334444444555666542 35678888999999999999999884 45553 3458
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc------CCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC------GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~------~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~ 385 (400)
+++|+.++....+..++...| .++||.+.+|..+ ..++++|++++. .+++++++++++|++++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 312 HLFLVDLRPKGLTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp SEEEEECGGGTCCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred eEEEEECcccCCCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 889999875333577888877 5899999998753 236789999963 5899999999999999987
No 114
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=2.5e-35 Score=281.41 Aligned_cols=344 Identities=13% Similarity=0.120 Sum_probs=247.9
Q ss_pred cCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCC--CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSI--SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 28 ~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
+++.+++|+.+.+ +++ +++++++++.+.+.+... ..|.+..+..++++++++++. +-.+++|++|+|+++|+
T Consensus 39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~~~~v~~~~g~~~a~ 115 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---GDFAKKTLLVTTGSEAV 115 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---CSSCEEEEEESSHHHHH
T ss_pred CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---cccccEEEEeCchHHHH
Confidence 4677899988764 444 689999999999876322 134456667788888888763 31348999999999999
Q ss_pred HHHHH---HhcCCCCEEEEeCCCccchhH-HHHhcCcE-------------EEEeccCCC----CCCCCCHHHHHHhhcc
Q 015768 103 VNIVL---TLCDAGDSVVMFAPYYFNSYM-SFQMTGVT-------------HILVGPCSS----KTLHPDADWLEKTLET 161 (400)
Q Consensus 103 ~~~~~---~l~~~gd~vlv~~p~~~~~~~-~~~~~g~~-------------~~~~~~~~~----~~~~~~~e~l~~~l~~ 161 (400)
..++. ++.++| .|++.+|+|++... .+...|.. ++.+ |.+. .++.+|++.+++.++.
T Consensus 116 ~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v-~~~~~~~~~~~~~d~~~l~~~l~~ 193 (426)
T 1sff_A 116 ENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRA-LYPCPLHGISEDDAIASIHRIFKN 193 (426)
T ss_dssp HHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEE-CCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEe-CCCccccccchHHHHHHHHHHHHh
Confidence 99988 677776 89999999988664 55555542 5556 6643 1234688999998863
Q ss_pred ---CCCCeEEEEe-CCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC
Q 015768 162 ---KPTPKLVSVV-NPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM 236 (400)
Q Consensus 162 ---~~~~~~v~l~-~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 236 (400)
...+++|+++ +++| || .+++.+++++|.++|++||+++|+||+|+++.+.+........+..+.+.|+||++|.
T Consensus 194 ~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~ 272 (426)
T 1sff_A 194 DAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAG 272 (426)
T ss_dssp TCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGT
T ss_pred ccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccC
Confidence 1224677765 4567 99 7889999999999999999999999999987655432221122222334599999984
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCc
Q 015768 237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGA 312 (400)
Q Consensus 237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~ 312 (400)
|+|+||++.+ +++++.+.......+++.+++.+.++.++|+...+ .+..++++++++++++.|+++ +.+.
T Consensus 273 -GlriG~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 346 (426)
T 1sff_A 273 -GFPLAGVTGR---AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ--ENLLQKANDLGQKLKDGLLAIAEKHPEIG 346 (426)
T ss_dssp -SSCCEEEEEE---HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred -CCceEEEEEc---HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 9999999998 77777665444456778899999998877764111 234566677777777777653 3222
Q ss_pred ccCCCCceEEEeeCCCC-------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 313 VKGGEGAIYLWARLPEK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
...+. ++++|++++.. ..+..++..+|. ++||.+.||..+ ++++||+++. .+++++++++++|+++++
T Consensus 347 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 422 (426)
T 1sff_A 347 DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIISQCFD 422 (426)
T ss_dssp EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 33445 78889888421 113567888776 689999998753 6899999874 799999999999999998
Q ss_pred HHh
Q 015768 385 ELV 387 (400)
Q Consensus 385 ~~~ 387 (400)
++.
T Consensus 423 ~~~ 425 (426)
T 1sff_A 423 EAK 425 (426)
T ss_dssp HHC
T ss_pred HHh
Confidence 753
No 115
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=2.7e-34 Score=274.54 Aligned_cols=349 Identities=11% Similarity=0.053 Sum_probs=233.8
Q ss_pred cCCCeEEcCCC--CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+|+.++||+.+ .++++ .+|++++++.+.+.+. ..|....+..+.++++++++.+.++.+.++|++++|+++|+..
T Consensus 27 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~ 104 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATES 104 (430)
T ss_dssp TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence 56789999987 35555 4899999999988763 2233345667888899999998888888999999999999999
Q ss_pred HHHHhc--------CCCCEEEEeCCCccchhHHHHhcCcE---------------EEEeccCCCC--CCCCCHHHHHHhh
Q 015768 105 IVLTLC--------DAGDSVVMFAPYYFNSYMSFQMTGVT---------------HILVGPCSSK--TLHPDADWLEKTL 159 (400)
Q Consensus 105 ~~~~l~--------~~gd~vlv~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~~--~~~~~~e~l~~~l 159 (400)
+++++. .+++.|++.+|+|+++.......+.. +..+ |.++. ....++++|++.+
T Consensus 105 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~le~~l 183 (430)
T 3i4j_A 105 AVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKL-PKPDPARNGAEDAEGLRALL 183 (430)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEE-CCCCTTSCHHHHHTHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEc-CCCcccchhhHHHHHHHHHH
Confidence 999886 34689999999999877554443321 1222 22111 0112558888888
Q ss_pred cc---CCCCeEEEEeCCCC-CCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC-CcEEEEeccccc
Q 015768 160 ET---KPTPKLVSVVNPGN-PSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG-DHVVNLFSFSKA 233 (400)
Q Consensus 160 ~~---~~~~~~v~l~~p~n-ptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~i~~~s~sK~ 233 (400)
+. .+ +++|++..++| ++|. +++.+++++|.++|++||+++|+||+|.++...+........ +....+.++||+
T Consensus 184 ~~~~~~~-~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~ 262 (430)
T 3i4j_A 184 EREGPET-VAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKG 262 (430)
T ss_dssp HHHCGGG-EEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGG
T ss_pred HhcCCCC-EEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEccc
Confidence 73 22 34555444466 7886 678889999999999999999999999988665533222222 222223468999
Q ss_pred cCCCc-ceeEEEEccCCcHHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhc
Q 015768 234 YGMMG-WRVGYIAYPSEVEGFATQLLKV----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALS 306 (400)
Q Consensus 234 ~g~~g-~~~G~i~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~ 306 (400)
++ +| +|+||++.+ +++++.+... ....+++.+++++.++.++|+.. ++..++..+.....++.+.+.++
T Consensus 263 l~-~G~~r~G~~~~~---~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (430)
T 3i4j_A 263 LA-AGYAPLAGLLAA---PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQA 338 (430)
T ss_dssp GT-TTSSCCEEEEEC---HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-CCccccEEEEEC---HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH
Confidence 98 69 999999998 8899888864 44567888999999999988742 22333334444444445555444
Q ss_pred cCCCCcccCCCCceEEEeeCCCCC--------CCHHHHHHHHHHhcCeEEeCCCcc--C-CCCeEEEEecc-CCHHHHHH
Q 015768 307 PLGEGAVKGGEGAIYLWARLPEKH--------LDDFEVVRWLAHRHGVVVIPGGAC--G-CRGHLRISFGG-LVEDDCKA 374 (400)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~--~-~~~~iRi~~~~-~~~~~~~~ 374 (400)
+++.+....+. +.++++.+.... ....+++..++ ++||.+.|+..+ + .++++||+++. .+++++++
T Consensus 339 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~ 416 (430)
T 3i4j_A 339 RFPQMMQVRGT-GLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDG 416 (430)
T ss_dssp HCTTEEEEEEE-TTEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEEEECCCTTCCHHHHHH
T ss_pred hCCCeEEEEEE-EEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHH
Confidence 55554555555 667777764211 12356788776 789999987422 1 36789999885 79999999
Q ss_pred HHHHHHHHHHHH
Q 015768 375 AADRLRRGLEEL 386 (400)
Q Consensus 375 ~~~~l~~~l~~~ 386 (400)
++++|+++++++
T Consensus 417 ~l~~l~~~l~~~ 428 (430)
T 3i4j_A 417 LLALLAGALEDV 428 (430)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 116
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=9.6e-34 Score=268.96 Aligned_cols=329 Identities=13% Similarity=0.115 Sum_probs=245.6
Q ss_pred cCCCeEEcCCCC-CCCCCcHHHHHHHHHhhcCCC--C----CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768 28 GAKNAVSLAQGV-VYWQPPKMAMEKVKELVWDPS--I----SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (400)
Q Consensus 28 ~~~~~i~~~~~~-~~~~~~~~v~~a~~~~~~~~~--~----~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~ 100 (400)
+|+.++||++++ .+++.+|++++++.+.+.+.. . ..++......++++.+++++ +.+ ..++++++++
T Consensus 57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~ 130 (409)
T 3kki_A 57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT----GFD--ECLLSQSGWN 130 (409)
T ss_dssp CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH----TCS--EEEEESCHHH
T ss_pred CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh----CCC--eEEEecchHH
Confidence 367799998875 445678999999999887621 1 12223344556677776665 543 3566677789
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768 101 AFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 101 a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~ 180 (400)
++..++.++.++||.|+++.|+|+++...++..|++++.+ +. .|++++++.+++.. +++|++++|+||||.+
T Consensus 131 a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~------~d~~~le~~l~~~~-~~~vi~~~~~nptG~~ 202 (409)
T 3kki_A 131 ANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPF-MH------NNCDHLRMLIQRHG-PGIIVVDSIYSTLGTI 202 (409)
T ss_dssp HHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEE-CT------TCHHHHHHHHHHHC-SCEEEEESBCTTTCCB
T ss_pred HHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEe-cC------CCHHHHHHHHHhcC-CeEEEECCCCCCCCCc
Confidence 9999999999999999999999999999999999999888 54 48999999998532 3999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccCC--CCcc---ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDG--RKHC---CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFAT 255 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~--~~~~---~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~ 255 (400)
.+ +++|.++|++||+++|+||+|+.+.++. .... ....+.++++.|+||++|.+ .||++.+ +++++
T Consensus 203 ~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~---~~~~~ 273 (409)
T 3kki_A 203 AP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR---AGAIWCN---NEVNR 273 (409)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS---CEEEEES---SSGGG
T ss_pred CC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC---ceEEEEC---HHHHH
Confidence 99 9999999999999999999998754432 1111 11224568899999999855 4999988 45555
Q ss_pred HHHHhhcc--CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCH
Q 015768 256 QLLKVQDN--IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDD 333 (400)
Q Consensus 256 ~l~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (400)
.+...... .+.+.++....++.++++...+ .++++++++++++++.+.|++++. .+. + .++++|+.++... +.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~~l~~~L~~~g~-~~~-~-~~~~~~~~~~~~~-~~ 348 (409)
T 3kki_A 274 CVPFISYPAIFSSTLLPYEAAGLETTLEIIES-ADNRRQHLDRMARKLRIGLSQLGL-TIR-S-ESQIIGLETGDER-NT 348 (409)
T ss_dssp THHHHCHHHHHSBCCCHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHTTTC-CCC-C-SSSEEEEEEESHH-HH
T ss_pred HHHHhCcCccccCCCcHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHcCC-ccC-C-CCCEEEEEeCCHH-HH
Confidence 55442221 2333566677777777764222 257778889999999999998864 444 3 4778888876422 35
Q ss_pred HHHHHHHHHhcCeEEeCCCccC---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGGACG---CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~~~~---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.++..+|. ++||.+.++..+. .++++||+++. ++++++++++++|+++++.
T Consensus 349 ~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 349 EKVRDYLE-SNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHH-HTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence 56888776 6699998765442 35799999986 7999999999999999875
No 117
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.3e-33 Score=266.80 Aligned_cols=333 Identities=14% Similarity=0.114 Sum_probs=242.5
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+|+.++||+.+. +.++ .+|++++++.+.+.+.. +.......+..+++++++.+.++ ++++++++|+++|++.
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~ 108 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLL---HTSNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEG 108 (395)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCS---CCCTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHH
T ss_pred CCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhcc---ccccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHH
Confidence 568899999884 5555 68999999999887642 21223345677788888877777 6899999999999999
Q ss_pred HHHHhc-------CCCCEEEEeCCCccchhHHHHhcC-------------cEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768 105 IVLTLC-------DAGDSVVMFAPYYFNSYMSFQMTG-------------VTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (400)
Q Consensus 105 ~~~~l~-------~~gd~vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~ 164 (400)
++.++. .++++|++.+|+|++........+ .++..+ |. .|++++++.+++++
T Consensus 109 al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~~- 180 (395)
T 3nx3_A 109 AMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFA-KY------NDISSVEKLVNEKT- 180 (395)
T ss_dssp HHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEE-CT------TCHHHHHTTCCTTE-
T ss_pred HHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEe-CC------CCHHHHHHhccCCe-
Confidence 998875 357999999999988764443332 233444 32 27899999997554
Q ss_pred CeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEE
Q 015768 165 PKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGY 243 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~ 243 (400)
++|++++++|++|.+ ++.+++++|.++|++||+++|+||+|.++...+........+....+.|+||.++ +|+|+||
T Consensus 181 -~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~-~G~~~G~ 258 (395)
T 3nx3_A 181 -CAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALG-CGLSVGA 258 (395)
T ss_dssp -EEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGT-TTSCCEE
T ss_pred -EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEeccccc-CCCceEE
Confidence 888888777777765 7888999999999999999999999997765443222222222233457899998 6899999
Q ss_pred EEccCCcHHH-HHHHHHhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCce
Q 015768 244 IAYPSEVEGF-ATQLLKVQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAI 320 (400)
Q Consensus 244 i~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 320 (400)
++.+ +++ ++.+.......+++.+++++.++.++++.. +++.++..+.....++.+.+.+..++.+....+. +.
T Consensus 259 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-g~ 334 (395)
T 3nx3_A 259 FVIN---QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGL-GF 334 (395)
T ss_dssp EEEC---HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE-TT
T ss_pred EEEc---hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeE-EE
Confidence 9998 677 777766555678888999999999888742 2233333333333444444444445543334344 67
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
++++.++.. .+..++...|. ++||.+.++. ++++||+++. .+++++++++++|++++++
T Consensus 335 ~~~~~~~~~-~~~~~~~~~l~-~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 335 MQGLSLDKS-VKVAKVIQKCQ-ENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp EEEEEECTT-SCHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCc-chHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 888888753 25778888776 7899999864 7899999776 7999999999999999864
No 118
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=5.8e-34 Score=270.14 Aligned_cols=335 Identities=16% Similarity=0.133 Sum_probs=248.5
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. ++++ .+|++++++.+.+.+... ++ .....+..+++++++.+.++. +++++|+|+++|++
T Consensus 36 ~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~~--~~v~~~~gg~~a~~ 110 (406)
T 4adb_A 36 QQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWH--TG-NGYTNEPVLRLAKKLIDATFA--DRVFFCNSGAEANE 110 (406)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSC--CC-TTSCCHHHHHHHHHHHHHSSC--SEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccc--cc-CCcCCHHHHHHHHHHHhhCCC--CeEEEeCcHHHHHH
Confidence 3567799999873 3343 589999999998876321 11 111234566677777776664 59999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
.++.++.. +| |.|++.+|+|+++.......+. ++..+ |. .|++++++.++++
T Consensus 111 ~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~ 183 (406)
T 4adb_A 111 AALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHA-AY------NDINSASALIDDS 183 (406)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEE-CT------TCHHHHHTTCSTT
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEe-CC------CcHHHHHHHhcCC
Confidence 99998865 66 9999999999998755544443 22233 22 3799999998755
Q ss_pred CCCeEEEEeCCCCCCccCC--CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCc
Q 015768 163 PTPKLVSVVNPGNPSGTYI--PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~~--~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g 238 (400)
+ ++|+++ |+||+|.++ +.+++++|.++|++||+++|+||+|+++.+.+..... .....+++ |+||.++ +|
T Consensus 184 ~--~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G 257 (406)
T 4adb_A 184 T--CAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-GG 257 (406)
T ss_dssp E--EEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TT
T ss_pred e--EEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-CC
Confidence 4 888888 999999988 9999999999999999999999999877665543221 11122333 6799998 89
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC--CcccC-
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE--GAVKG- 315 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~- 315 (400)
+|+||++.+ +++++.+.......+++.+++.+.++..+++...+ ++..++++++++++.+.|++++. ..+..
T Consensus 258 ~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 332 (406)
T 4adb_A 258 FPVGALLAT---EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT--PEMLNGVKQRHDWFVERLNTINHRYGLFSEV 332 (406)
T ss_dssp SCCEEEEEC---HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred CCeEEEEEc---HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 999999998 78888777666667888999999999988874222 56677778888888888876432 01111
Q ss_pred CCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 316 GEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+..+.++++.++... .+..++...|. ++||.+.++. ++++|++++. .+++++++++++|+++++++.++
T Consensus 333 ~~~g~~~~~~~~~~~~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 403 (406)
T 4adb_A 333 RGLGLLIGCVLNADYAGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSR 403 (406)
T ss_dssp EEETTEEEEEECTTTTTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEEEEEEEeCCcHHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 123677888887531 24778888886 6799999854 7899997666 79999999999999999988654
No 119
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1e-33 Score=263.14 Aligned_cols=319 Identities=16% Similarity=0.090 Sum_probs=237.7
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768 41 YWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (400)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv 118 (400)
+.++|+++++++.+.+.. . +++ ......+++.+++++.+|.+ ++++++|+|+++|+..++.++.+ |+|++
T Consensus 8 p~~~~~~v~~a~~~~~~~---~-~~~--~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 8 PTPIPERVQKALLRPMRG---H-LDP--EVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp SCCCCHHHHGGGGSCCCC---T-TCH--HHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCCHHHHHHHhccccc---c-cCH--HHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 346678999888877654 1 211 12233445555555555775 68899999999999999999976 89999
Q ss_pred eCCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH
Q 015768 119 FAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA 195 (400)
Q Consensus 119 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~ 195 (400)
+.++|+++ ...++..|++++.+ |.+++ +.+|++.+++.+++ ++ ++|++++|+||||.+++ +++|.++|++
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~~~---~~~i~~l~~~ 152 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVL-DFPPG-EPVDPEAVARALKRRRY--RMVALVHGETSTGVLNP---AEAIGALAKE 152 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEE-ECCTT-SCCCHHHHHHHHHHSCC--SEEEEESEETTTTEECC---HHHHHHHHHH
T ss_pred EcCCCchHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHHHHHHhCCC--CEEEEEccCCCcceecC---HHHHHHHHHH
Confidence 99999875 45567789999999 88765 46899999999986 44 89999999999999999 8899999999
Q ss_pred cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHH--------------h
Q 015768 196 AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLK--------------V 260 (400)
Q Consensus 196 ~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~--------------~ 260 (400)
||+++|+|++|+.+. .+......+.++++.|++|+++ .+| +||++.+ +++++++.. .
T Consensus 153 ~~~~li~D~a~~~~~---~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~ 224 (353)
T 2yrr_A 153 AGALFFLDAVTTLGM---LPFSMRAMGVDYAFTGSQKCLSAPPG--LAPIAAS---LEARKAFTGKRGWYLDLARVAEHW 224 (353)
T ss_dssp HTCEEEEECTTTTTT---SCCCHHHHTCSEEECCTTSTTCCCSS--CEEEEEC---HHHHHHCCCCSCSTTCHHHHHHHH
T ss_pred cCCeEEEEcCccccc---ccccccccCceEEEecCcccccCCCc--eEEEEEC---HHHHHHhccCCCccccHHHHhhhh
Confidence 999999999996322 2211111245688999999764 344 7999998 677665531 0
Q ss_pred -hccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC--CceEEEeeCCCCCCCHHHH
Q 015768 261 -QDNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE--GAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 261 -~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 336 (400)
.....++++...+.++..+++...++ +++..++++++++++.+.|+++ ++.+..+. ++.++++.++.. .+..++
T Consensus 225 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 302 (353)
T 2yrr_A 225 ERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEG-VDADRL 302 (353)
T ss_dssp TTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTT-CCHHHH
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCC-CCHHHH
Confidence 12234466777777776776642233 6778888999999999999887 44555443 466778888643 367888
Q ss_pred HHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHH-HHHHHHHHHHHH
Q 015768 337 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCK-AAADRLRRGLEE 385 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~-~~~~~l~~~l~~ 385 (400)
.+.|. ++||.+.+|..|..++++|++++. .++++++ +++++|+++++.
T Consensus 303 ~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 303 VRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp HHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 88886 679999999887778899999954 6888898 999999988753
No 120
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=7.5e-34 Score=263.70 Aligned_cols=330 Identities=16% Similarity=0.187 Sum_probs=233.5
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
.+++|+|+.+.+.+ +++.+++++.+.... ...|++..+..++++++++++ |. +++++++|+++++..++.+
T Consensus 2 ~~~~i~~~~~~~~~-p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~----g~--~~~~~~~~gt~a~~~~~~~ 72 (347)
T 1jg8_A 2 PHMMIDLRSDTVTK-PTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF----GK--EAALFVPSGTMGNQVSIMA 72 (347)
T ss_dssp ---CEECSCGGGCC-CCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHH
T ss_pred CceEEEeccccCCC-CCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHh----CC--ceEEEecCcHHHHHHHHHH
Confidence 35789999998877 568888888765432 235766667778888888887 43 4788899999999999999
Q ss_pred hcCCCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCC-ccC
Q 015768 109 LCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPS-GTY 180 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~npt-G~~ 180 (400)
+.+|||+|+++.|+|.+... .++..|++++.+ .. + ++.+|++.+++.+++. ..+++|++++|+||| |.+
T Consensus 73 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~-~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~ 149 (347)
T 1jg8_A 73 HTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG-K-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRV 149 (347)
T ss_dssp HCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE-E-TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBC
T ss_pred hcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC-C-CCccCHHHHHHHhccccccccCceEEEEeccccccCCcc
Confidence 99999999999999976543 567789988877 32 2 3457999999998752 135999999999999 999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccc--cCCCCccccCCCcEEEEeccccccCCCcceeE-EEEccCCcHHHHHHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFM--YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVG-YIAYPSEVEGFATQL 257 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G-~i~~~~~~~~~~~~l 257 (400)
+|.+++++|+++|++||+++|+|++|..+. +.+..........+.++.|+||+++++ +| +++.+ +++++++
T Consensus 150 ~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~---~G~~~~~~---~~~~~~~ 223 (347)
T 1jg8_A 150 VPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAP---VGSVVVGD---RDFIERA 223 (347)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCS---SCEEEEEC---HHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCC---ceEEEEcC---HHHHHHH
Confidence 999999999999999999999999975422 112111111112234556899999733 46 45666 7777776
Q ss_pred HHhhccCC--cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCCCCCHH
Q 015768 258 LKVQDNIP--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHLDDF 334 (400)
Q Consensus 258 ~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 334 (400)
...+.... ...+...+.++..+++...+.+. +..++++.+.+.|++++. .+ ..+..++++|++++....+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 298 (347)
T 1jg8_A 224 RKARKMLGGGMRQAGVLAAAGIIALTKMVDRLK----EDHENARFLALKLKEIGY-SVNPEDVKTNMVILRTDNLKVNAH 298 (347)
T ss_dssp HHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHH----HHHHHHHHHHHHHHHHTC-BCCGGGCCSSEEEEECTTSSSCHH
T ss_pred HHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhcCc-eeccCCCcceEEEEEcccccCCHH
Confidence 65443222 22344455555555653222222 233456777777777633 33 223346789999874223678
Q ss_pred HHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
++..+|. ++||.+.++. ++++|++++. ++++++++++++|+++++++
T Consensus 299 ~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 299 GFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp HHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 8998886 7899998753 5789999875 79999999999999988753
No 121
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=8.5e-34 Score=270.03 Aligned_cols=333 Identities=14% Similarity=0.154 Sum_probs=238.0
Q ss_pred cCCCeEEcCCCC--CCCCC--cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQP--PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
+++.++||+.+. ++++. ||++++++.+.+.+.. .|+...+....+.++++.+.+.++.+ +++|++|+|+++++
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~ 117 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAI 117 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHH
Confidence 467799998887 45543 7999999999987642 23222333456677777777777877 78999999999999
Q ss_pred HHHHHHhcC-CCCEEEEeCCCccchhHHHH-hc--------C-----cEEEEeccCCCCCCC----------------CC
Q 015768 103 VNIVLTLCD-AGDSVVMFAPYYFNSYMSFQ-MT--------G-----VTHILVGPCSSKTLH----------------PD 151 (400)
Q Consensus 103 ~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~-~~--------g-----~~~~~~~~~~~~~~~----------------~~ 151 (400)
+.+++++.. +||+|++.+|+|++...... .. + ..++.+ |.++. +. ++
T Consensus 118 ~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~-~~~~~g~~~~~~~~~~~~~~ 195 (419)
T 2eo5_A 118 EASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHV-PYPNP-YRNPWHINGYENPSELVNRV 195 (419)
T ss_dssp HHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEE-CCCCS-SSCTTCCCTTTCHHHHHHHH
T ss_pred HHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEE-CCCcc-ccccccccccccchhhHHHH
Confidence 999987654 48999999999987654332 21 1 245666 65432 11 35
Q ss_pred HHHHH-HhhccC---CCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCc
Q 015768 152 ADWLE-KTLETK---PTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDH 223 (400)
Q Consensus 152 ~e~l~-~~l~~~---~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~ 223 (400)
++.++ +.++.. . ...+++++| +||||. +++.+++++|.++|++||+++|+||+|.++...+...... ....
T Consensus 196 ~~~l~~~~i~~~~~~~-~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~ 274 (419)
T 2eo5_A 196 IEFIEDYIFVNLVPPE-EVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVP 274 (419)
T ss_dssp HHHHHHTHHHHTCCGG-GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCC
T ss_pred HHHHHHHHHhhccCCC-CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCC
Confidence 78898 888631 1 134445566 567896 6789999999999999999999999999876544321111 1112
Q ss_pred EEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
+ +.|+||.+| +| +|+||++.+ ++++ .+ ......+++.+++++.++.++|+. ..+..++++++++++.
T Consensus 275 d--~~t~sK~~~-~G~~riG~~~~~---~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~----~~~~~~~~~~~~~~l~ 342 (419)
T 2eo5_A 275 D--VITLAKALG-GGIMPIGATIFR---KDLD-FK-PGMHSNTFGGNALACAIGSKVIDI----VKDLLPHVNEIGKIFA 342 (419)
T ss_dssp S--EEEECGGGG-TTTSCCEEEEEE---GGGC-CC-------CCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred C--EEEeccccc-CCccceEEEEEc---hHhh-cC-CcccCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 2 337999998 69 999999988 5555 55 323345778899999999999974 2237788889999999
Q ss_pred HHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 303 EALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 303 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+.|+++ +....+. ++|+++++........ ++..|+ ++||.+.++. ++++||+++. .+++++++++++|++
T Consensus 343 ~~L~~~--~~~~~~~-g~~~~i~~~~~~~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~i~~~l~~l~~ 413 (419)
T 2eo5_A 343 EELQGL--ADDVRGI-GLAWGLEYNEKKVRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEEAKQGLDILKK 413 (419)
T ss_dssp HHHTTS--SSEEEEE-TTEEEEECSCHHHHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHh--hhheEee-eEEEEEEEecCccHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 999887 2344444 6788888842111244 777776 8999999864 6799998875 799999999999999
Q ss_pred HHHHH
Q 015768 382 GLEEL 386 (400)
Q Consensus 382 ~l~~~ 386 (400)
+++++
T Consensus 414 ~l~~~ 418 (419)
T 2eo5_A 414 VIKVV 418 (419)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 98753
No 122
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=3e-33 Score=269.38 Aligned_cols=350 Identities=12% Similarity=-0.004 Sum_probs=247.9
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+|+.++||+.+. +.++ .+|++++++.+.+.+.. ..|....+..+.+.++++++.+..+...+++++++|+++|++.
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~ 127 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLA-YYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET 127 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHS-CCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence 567899998873 4454 57999999998886532 1233334456778888888888877778899999999999999
Q ss_pred HHHHhcC--------CCCEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCC----CCCCCC--------
Q 015768 105 IVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS----KTLHPD-------- 151 (400)
Q Consensus 105 ~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~~-------- 151 (400)
+++++.. +++.|++.+++|++........+. .+..+ |... +....+
T Consensus 128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~g~~~~~~~~~~ 206 (460)
T 3gju_A 128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHT-EAPYYFRRTDRSMSEEQFSQHC 206 (460)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEE-CCCCGGGCSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEe-CCCccccCCccccChhHHHHHH
Confidence 9999874 469999999999987755443321 23333 3221 111122
Q ss_pred HHHHHHhhcc-C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 152 ADWLEKTLET-K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 152 ~e~l~~~l~~-~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
+++|++.++. . ..+++|+++.++|++|. +++.+++++|.++|++||+++|+||+|.++...+........+....+.
T Consensus 207 ~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~ 286 (460)
T 3gju_A 207 ADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI 286 (460)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee
Confidence 6888888862 1 22466766666778887 7788899999999999999999999999876544322111111112234
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR 298 (400)
Q Consensus 229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~ 298 (400)
++||+++ +| +|+||++.+ +++++.+.. .....+++.+++++.++.++|+.. +++.++..+.....+
T Consensus 287 t~sK~l~-gG~~~lg~v~~~---~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~ 362 (460)
T 3gju_A 287 TIAKGLT-SAYAPLSGVIVA---DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFR 362 (460)
T ss_dssp EECGGGT-TTSSCCEEEEEE---HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred eeehhhc-CCCCCeEEEEEC---HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 6889997 56 899999998 788888853 244567889999999999999742 234455555556666
Q ss_pred HHHHHHhccCCCCcccCCCCceEEEeeCCCCCC----------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768 299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 367 (400)
Q Consensus 299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~ 367 (400)
+.+.+.+++++.+....+. +.++++.+..... ...+++..++ ++||.+.|+. .++++||+++. .
T Consensus 363 ~~l~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~---~~~~iRi~~~~~~ 437 (460)
T 3gju_A 363 AELAKAVGGHKNVGEVRGD-GMLAAVEFVADKDDRVFFDASQKIGPQVATALA-ASGVIGRAMP---QGDILGFAPPLCL 437 (460)
T ss_dssp HHHHHHHTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEECS---SSCEEEECCCTTC
T ss_pred HHHHHHHhcCCCeEEEeee-eEEEEEEEccCccccccccchHHHHHHHHHHHH-HCCeEEecCC---CCCEEEEECCCCC
Confidence 6777777777654555555 6666666653211 1446777776 7899999865 45899999775 7
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015768 368 VEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+++++++++++|+++++++.+
T Consensus 438 t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 438 TREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp CHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988654
No 123
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=7.1e-34 Score=266.70 Aligned_cols=321 Identities=16% Similarity=0.133 Sum_probs=240.1
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCC--CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPS--ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
+++.++||+.+. ++++ +++.+++++.+.+.+.. ...| +..+..++++.+++++ |+ ++++++++|+++++
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~-~~~v~~~~g~t~a~ 99 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT-EGKVFFANSGTESV 99 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS-CEEEEEESSHHHHH
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC-CCeEEEeCchHHHH
Confidence 467899999887 3566 78999999998876421 2345 3334555666555554 76 48999999999999
Q ss_pred HHHHHH---hc---CCC-CEEEEeCCCccchhHHHHhcCcE-------------EEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 103 VNIVLT---LC---DAG-DSVVMFAPYYFNSYMSFQMTGVT-------------HILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 103 ~~~~~~---l~---~~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
..++.+ +. +|| |+|++++|+|+++...+...+.. +..+ |. .|++++++.++++
T Consensus 100 ~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~d~~~l~~~l~~~ 172 (375)
T 2eh6_A 100 EAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYA-KL------NDIDSVYKLLDEE 172 (375)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEE-CT------TCHHHHHTTCCTT
T ss_pred HHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeC-CC------chHHHHHHHhcCC
Confidence 999975 35 788 99999999998887655444322 2222 21 4899999988754
Q ss_pred CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCC--cEEEEeccccccCCCcc
Q 015768 163 PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGD--HVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~i~~~s~sK~~g~~g~ 239 (400)
+++|++++++||||.+ .+.+++++|.++|++||+++|+||+|+++...+........+ .+++ |+||+++ +|+
T Consensus 173 --~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~--s~SK~~~-~g~ 247 (375)
T 2eh6_A 173 --TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI--ALAKGLG-GGV 247 (375)
T ss_dssp --EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-TTS
T ss_pred --eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEE--EEccccc-CCC
Confidence 4999999999999998 568889999999999999999999999765433222111111 2333 7789998 799
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 319 (400)
|+||++.+ +++++.+.......+++.+++.+.++..+|+. ..+..++++++++++.+.|++++. ....+ .+
T Consensus 248 ~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~g 318 (375)
T 2eh6_A 248 PIGAILAR---EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDE----VEKLLPHVREVGNYFKEKLKELGK-GKVKG-RG 318 (375)
T ss_dssp CCEEEEEE---HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTS-SEEEE-ET
T ss_pred CeEEEEEc---HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc-CCceE-EE
Confidence 99999998 67776665533345667788888888877764 226777888889999999988765 33333 37
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+++|++++. +..+++..|. ++||.+.++ .++++|++++. .+++++++++++|++++
T Consensus 319 ~~~~~~~~~---~~~~~~~~l~-~~gi~~~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 319 LMLGLELER---ECKDYVLKAL-EKGLLINCT----AGKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp TEEEEECSS---CCHHHHHHHH-HTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcC---cHHHHHHHHH-HCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 888999874 3567888886 699999885 36899999885 79999999999998763
No 124
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=3.6e-34 Score=270.82 Aligned_cols=328 Identities=12% Similarity=0.093 Sum_probs=242.6
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+++.++||+.+. ++++ .++++++++.+.+.+... ++. ....+.++++++.+++.+| .+++++++|+++|+..
T Consensus 38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~ 112 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF--GGKVFFANTGTEANEA 112 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHH
T ss_pred CCCEEEECCccccccccCCCCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHH
Confidence 467799998873 3443 589999999988865321 111 1134566777777777666 5899999999999999
Q ss_pred HHHHhcC------C-CCEEEEeCCCccchhH-HHHhcCcE------------EEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768 105 IVLTLCD------A-GDSVVMFAPYYFNSYM-SFQMTGVT------------HILVGPCSSKTLHPDADWLEKTLETKPT 164 (400)
Q Consensus 105 ~~~~l~~------~-gd~vlv~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~~~e~l~~~l~~~~~ 164 (400)
++.++.. + ++.|++.+|+|++... .++..|.+ ++.+ |.+ |++++++.++++
T Consensus 113 al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~-~~~------d~~~l~~~l~~~-- 183 (397)
T 2ord_A 113 AIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYF-EFN------NVEDLRRKMSED-- 183 (397)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEE-CTT------CHHHHHHHCCTT--
T ss_pred HHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEe-cCC------CHHHHHHHhhcC--
Confidence 9998863 5 4789999999977554 66667764 5556 532 799999999764
Q ss_pred CeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCccee
Q 015768 165 PKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWRV 241 (400)
Q Consensus 165 ~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~~ 241 (400)
+++|++++|+||||. +++.+++++|.++|++||+++|+||+|+++.+.+..... .....+++ |+||+++ +|+|+
T Consensus 184 ~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~G~r~ 260 (397)
T 2ord_A 184 VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLG-GGVPI 260 (397)
T ss_dssp EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTSCC
T ss_pred eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccC-CCcCe
Confidence 499999999999999 999999999999999999999999999876654432211 11112233 7899998 89999
Q ss_pred EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC--C--CcccCCC
Q 015768 242 GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--E--GAVKGGE 317 (400)
Q Consensus 242 G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--~--~~~~~~~ 317 (400)
||++.++ +++ .+.......+++.+++.+.++..+|+...+ ++..++++++++++.+.|++++ . .....+.
T Consensus 261 G~~~~~~---~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 334 (397)
T 2ord_A 261 GAVIVNE---RAN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGM 334 (397)
T ss_dssp EEEEECS---TTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred EEEEEch---Hhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEE
Confidence 9999884 444 443333445677899999988888874222 3566777888888888887652 2 1112333
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
+.++++.++... +..++..+|. ++||.+.++. ++++|++++. .+++++++++++|++++++
T Consensus 335 -g~~~~~~~~~~~-~~~~l~~~l~-~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 335 -GLMIGIQFREEV-SNREVATKCF-ENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp -TTEEEEEECTTS-CHHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -eEEEEEEECChH-HHHHHHHHHH-HCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 677888887532 5778888886 6899999863 6899999764 7999999999999998864
No 125
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=4.9e-33 Score=265.74 Aligned_cols=340 Identities=13% Similarity=0.079 Sum_probs=238.3
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+++.++||+.+. ++++ .+|++++++.+.+.+.....+ .........++++.+.+.+++++++|++++|+++|++.
T Consensus 41 ~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ 118 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF--GGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEV 118 (429)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCC--SSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHH
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc--cccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Confidence 467789998876 4554 589999999998865321111 11122345556666666667788999999999999999
Q ss_pred HHHHhc---C----CCCEEEEeCCCccchhHHHHh-cC-------------cEEEEeccCCC----CCC-CCCHHHHHHh
Q 015768 105 IVLTLC---D----AGDSVVMFAPYYFNSYMSFQM-TG-------------VTHILVGPCSS----KTL-HPDADWLEKT 158 (400)
Q Consensus 105 ~~~~l~---~----~gd~vlv~~p~~~~~~~~~~~-~g-------------~~~~~~~~~~~----~~~-~~~~e~l~~~ 158 (400)
+++++. + |||+|++.+|+|+++...... .| ..+..+ +.+. +.+ .+|++++++.
T Consensus 119 ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~l~~~ 197 (429)
T 1s0a_A 119 AMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFA-PAPQSRMDGEWDERDMVGFARL 197 (429)
T ss_dssp HHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEE-CCCCSBC-CCCCGGGGHHHHHH
T ss_pred HHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEe-CCCcccccccchHHHHHHHHHH
Confidence 998764 2 689999999999886543321 11 123334 4331 122 4689999998
Q ss_pred hccC-CCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccc
Q 015768 159 LETK-PTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKA 233 (400)
Q Consensus 159 l~~~-~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~ 233 (400)
++.. ..+++|+++.. +||||. .++.+++++|.++|++||+++|+||+|.++...+...... ....++ .|+||.
T Consensus 198 l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~--~t~sK~ 275 (429)
T 1s0a_A 198 MAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDI--LCLGKA 275 (429)
T ss_dssp HHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE--EEECGG
T ss_pred HHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCE--EEeccc
Confidence 8731 22355554444 689996 6678899999999999999999999998765443321111 112223 378999
Q ss_pred cCCCc-ceeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 234 YGMMG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 234 ~g~~g-~~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
++ +| +|+||++.+ +++++.+... ....+++.|++++.++.++++...+ .+..++++++++++.+.|++
T Consensus 276 l~-~G~~~iG~~~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 349 (429)
T 1s0a_A 276 LT-GGTMTLSATLTT---REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES--GDWQQQVADIEVQLREQLAP 349 (429)
T ss_dssp GG-TSSSCCEEEEEC---HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHGG
T ss_pred cc-CCCccceEEEeC---HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH
Confidence 98 68 999999988 7888887653 1335677899999988888874111 24556677788888888887
Q ss_pred C---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 308 L---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 308 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+ +.+....+. +.++|++++.. .+..++..+|. ++||.+.+. .+++||+++. .+++++++++++|++++
T Consensus 350 l~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~~~t~e~i~~~~~~l~~~~ 421 (429)
T 1s0a_A 350 ARDAEMVADVRVL-GAIGVVETTHP-VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPYIILPQQLQRLTAAVNRAV 421 (429)
T ss_dssp GGGCTTEEEEEEE-TTEEEEEESSC-BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHT
T ss_pred HhcCCCEEEEEEe-eEEEEEEECCc-ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 5 332323344 56888888653 25778888886 789999873 3799999875 79999999999999987
Q ss_pred HHH
Q 015768 384 EEL 386 (400)
Q Consensus 384 ~~~ 386 (400)
+++
T Consensus 422 ~~~ 424 (429)
T 1s0a_A 422 QDE 424 (429)
T ss_dssp SSG
T ss_pred Hhh
Confidence 654
No 126
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=6e-33 Score=260.41 Aligned_cols=320 Identities=11% Similarity=0.048 Sum_probs=235.3
Q ss_pred CCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC-c-EEEeCChHHHHHHHHHHhcCCCCEEEEe
Q 015768 42 WQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFVNIVLTLCDAGDSVVMF 119 (400)
Q Consensus 42 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~-i~~~~g~t~a~~~~~~~l~~~gd~vlv~ 119 (400)
.++|+++++++.+.+.. .+ .....++.+++++++++.+|++.+ + +++++|++++++.++.++.++||+|+++
T Consensus 28 ~~~~~~v~~a~~~~~~~----~~--~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~ 101 (376)
T 3f0h_A 28 VMSSEEVRAIGAEQVPY----FR--TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVI 101 (376)
T ss_dssp CCCCHHHHHHHTSCCCC----CS--SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEE
T ss_pred CCCcHHHHHHhcCCCCC----CC--CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEE
Confidence 45689999888775532 12 223456777888888888888642 4 4558999999999999999999999999
Q ss_pred CCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 120 APYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 120 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
.|+|++.. ..++..|++++.+ +.+.+ +.+|++.+++.+++++ +++++++|+||||.++| +++|.++|++||
T Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~~~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 174 (376)
T 3f0h_A 102 DGGSFGHRFVQLCEIHEIPYVAL-KLEHG-KKLTKEKLYEYDNQNF--TGLLVNVDETSTAVLYD---TMMIGEFCKKNN 174 (376)
T ss_dssp ESSHHHHHHHHHHHHTTCCEEEE-ECCTT-CCCCHHHHHTTTTSCC--CEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred eCChhhHHHHHHHHHcCCceEEE-eCCCC-CCCCHHHHHHhhccCc--eEEEEecccCCcceecC---HHHHHHHHHHcC
Confidence 99887744 3467789998888 77643 5789999999876655 99999999999999999 999999999999
Q ss_pred CEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhc--------------
Q 015768 198 SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQD-------------- 262 (400)
Q Consensus 198 ~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~-------------- 262 (400)
+++|+|++++.+... ......+.++++.|+||+++ .+| +|+++.+ +++++++.....
T Consensus 175 ~~li~D~~~~~~~~~---~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (376)
T 3f0h_A 175 MFFVCDCVSAFLADP---FNMNECGADVMITGSQKVLACPPG--ISVIVLA---PRGVERVEKSKVRTMYFDLKDALKNQ 246 (376)
T ss_dssp CEEEEECTTTTTTSC---CCHHHHTCSEEEEETTTTTCCCSS--CEEEEEC---HHHHHHHHTCCCCCSTTCHHHHHHHH
T ss_pred CEEEEEcCccccCcc---ccccccCccEEEecCcccccCCCc--eEEEEEC---HHHHHHhhcCCCCceeecHHHHHhhc
Confidence 999999999854321 11122345688999999997 444 6888888 788777764211
Q ss_pred ---cCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCcccCCC-CceEEEeeCCCCCCCHHHH
Q 015768 263 ---NIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEV 336 (400)
Q Consensus 263 ---~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 336 (400)
...++++...+.++..+++...+ .+++..+++.++++++.+.|++++. .+..+. ...++.+..+ ..+..++
T Consensus 247 ~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~l 323 (376)
T 3f0h_A 247 ERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPF-ELVSESPANGVTSVHPT--TANAYDI 323 (376)
T ss_dssp TTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSE-EECCSSBBTTEEEEEES--SSCHHHH
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-ccCccccCceEEEEeCC--CCCHHHH
Confidence 12345555444555555542112 4677888889999999999998864 333322 2222333322 2367889
Q ss_pred HHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 337 VRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 337 ~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
...|.+++||.+.+|.....++++|++++. ++++++++++++|++++++
T Consensus 324 ~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 324 FLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp HHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 988875559999998655567899999976 7999999999999998864
No 127
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=5.1e-33 Score=267.68 Aligned_cols=349 Identities=13% Similarity=0.033 Sum_probs=243.3
Q ss_pred hcCCCeEEcCCC--CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+ .+.++ .+|++++++.+.+.+.. ..|....+..+.+.++++++.+.++.+.++|++++|+++|++
T Consensus 47 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~ 125 (459)
T 4a6r_A 47 SEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELP-FYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVD 125 (459)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCS-CCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHH
Confidence 446789999987 35554 57999999999887632 123333445678888999998888877889999999999999
Q ss_pred HHHHHhcC--------CCCEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCC----CCCCCC-------
Q 015768 104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSS----KTLHPD------- 151 (400)
Q Consensus 104 ~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~~------- 151 (400)
.+++++.+ +++.|++..|+|+++.......+. .+..+ +... ..+ .|
T Consensus 126 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~-~d~~~~~~~ 203 (459)
T 4a6r_A 126 TMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHI-EQPWWYKHGKD-MTPDEFGVV 203 (459)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEE-CCCCHHHHCTT-CCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEe-CCCccccCCcc-cCHHHHHHH
Confidence 99999875 569999999999987755544321 22233 3211 111 24
Q ss_pred -HHHHHHhhcc-C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 152 -ADWLEKTLET-K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 152 -~e~l~~~l~~-~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
+++|++.+.. . ..+++|++..+++++|. +++.+++++|.++|++||+++|+||+|.++...+........+....+
T Consensus 204 ~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi 283 (459)
T 4a6r_A 204 AARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDL 283 (459)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred HHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCe
Confidence 7888888862 1 11355555544566666 569999999999999999999999999987655532211111111113
Q ss_pred eccccccCCCcceeEEEEccCCcHHHHHHHH---HhhccCCcCccHHHHHHHHHHhcCC--cHHHHHHH-HHHHHHHHHH
Q 015768 228 FSFSKAYGMMGWRVGYIAYPSEVEGFATQLL---KVQDNIPICASIISQHLALYSLQTG--PEWVTERV-KDLVRNREII 301 (400)
Q Consensus 228 ~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~-~~~~~~~~~l 301 (400)
.++||+++.+|+|+||++.+ +++++.+. ......+++.+++++.++.++|+.. ++..++.. +.....++.+
T Consensus 284 ~t~sK~l~gg~~~lg~v~~~---~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l 360 (459)
T 4a6r_A 284 FTAAKGLSSGYLPIGAVFVG---KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRW 360 (459)
T ss_dssp EEECGGGGTTSSCCEEEEEC---HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHH
T ss_pred eehhhhhcCCCCCccceeeC---HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 36789997444999999998 88888887 3444567888999999999999742 22333333 3444445555
Q ss_pred HHHhccCCCCcccCCCCceEEEeeCCCCCCC----------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHH
Q 015768 302 REALSPLGEGAVKGGEGAIYLWARLPEKHLD----------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVED 370 (400)
Q Consensus 302 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~ 370 (400)
.+.|++++.+....+. +.++++.+.....+ ..+++..++ ++||.+.|+. +++||+++. .+++
T Consensus 361 ~~~l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~iRi~~~~~~t~e 433 (459)
T 4a6r_A 361 RETFSRFEHVDDVRGV-GMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFF-RNNLIMRACG-----DHIVSAPPLVMTRA 433 (459)
T ss_dssp HHHHTTCTTEEEEEEE-TTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHH-HTTEECEEET-----TEEEECCCTTCCHH
T ss_pred HHHHhcCCCeEEEEEE-EEEEEEEEecCccccccccchHHHHHHHHHHHH-HCCeEEecCC-----CEEEEECCCCCCHH
Confidence 5555666554455555 66666666432111 456777776 7899999853 899999776 7999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 015768 371 DCKAAADRLRRGLEELVK 388 (400)
Q Consensus 371 ~~~~~~~~l~~~l~~~~~ 388 (400)
++++++++|+++++++.+
T Consensus 434 ~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 434 EVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998764
No 128
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=2.6e-34 Score=271.99 Aligned_cols=337 Identities=15% Similarity=0.052 Sum_probs=228.8
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
..++.|.|+.+.+. ++|+++++++.+.+.+.. ...|....+..+..+++.+++++.+|++++++++|+|+++|+..
T Consensus 17 ~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~ 95 (400)
T 3vax_A 17 RGSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNI 95 (400)
T ss_dssp -----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHH
T ss_pred ccCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHH
Confidence 34556777666544 568999999988875311 11121222334566777777777779888999999999999999
Q ss_pred HHHHhc----CCCC-EEEEeCCCccchhHHHHh---cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 105 IVLTLC----DAGD-SVVMFAPYYFNSYMSFQM---TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 105 ~~~~l~----~~gd-~vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
++.++. ++|| +|+++.++|+++...++. .|++++.+ |.+++ +.+|++++++.+++++ ++|++++|+||
T Consensus 96 ~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~~~i~~~~--~~v~~~~~~np 171 (400)
T 3vax_A 96 ALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFL-TPGPS-GRISVEGVMERLRPDT--LLVSLMHVNNE 171 (400)
T ss_dssp HHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEE-CCCTT-CCCCHHHHHTTCCTTE--EEEECCSBCTT
T ss_pred HHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEE-ccCCC-CCcCHHHHHHhcCCCc--eEEEEECCCCC
Confidence 999998 8999 999999999887765544 69999999 88764 4789999999998665 99999999999
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE-ccCCcHHHH-
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA-YPSEVEGFA- 254 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~-~~~~~~~~~- 254 (400)
||.+.+ +++|.++|++||+++|+|++|+.... +...... .+++++|+||.+|.+| +|+++ .++ +++.
T Consensus 172 tG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~---~~~~~~~-~d~~~~s~~K~~g~~g--~g~~~~~~~--~~~~~ 240 (400)
T 3vax_A 172 TGVIQP---VAELAQQLRATPTYLHVDAAQGYGKV---PGDLTTP-IDMISISGHKIGAPKG--VGALVTRRR--EEMDD 240 (400)
T ss_dssp TCBBCC---HHHHHHHHTTSSCEEEEECTTTTTTS---GGGGGSC-CSEEEEETGGGTSCSS--CEEEEECBC--SSSTT
T ss_pred ceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCCC---CcChhhc-CcEEEEeHHHhCCCCc--eEEEEEecc--hhccc
Confidence 999999 88999999999999999999984322 1112222 6689999999776444 57766 663 1111
Q ss_pred --HHHHHhh-------ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCC---ceEE
Q 015768 255 --TQLLKVQ-------DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEG---AIYL 322 (400)
Q Consensus 255 --~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~ 322 (400)
..+.... .....+.+...+.++..+++...+++++..++++++++++.+.|+ .+++.+..+.. +.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~ 319 (400)
T 3vax_A 241 ERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHIL 319 (400)
T ss_dssp CBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEE
T ss_pred cccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEE
Confidence 1111111 122445677777777677664334567888999999999999998 66656665543 3567
Q ss_pred EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-------------------CCeEEEEe-cc-CCHHHHHHHHHHHHH
Q 015768 323 WARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-------------------RGHLRISF-GG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 323 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-------------------~~~iRi~~-~~-~~~~~~~~~~~~l~~ 381 (400)
++.++. .+.+++...|. +||.+.+|..|.. ++++||++ +. .+++++++++++|++
T Consensus 320 ~~~~~~--~~~~~l~~~L~--~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 395 (400)
T 3vax_A 320 NLSFED--VDAEAFLVTLK--DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAK 395 (400)
T ss_dssp EEECTT--CCHHHHHHHHH--HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC----------------
T ss_pred EEEeCC--CCHHHHHHHHh--cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHH
Confidence 777764 36788888774 8999999875532 48999999 76 789999999999998
Q ss_pred HHHH
Q 015768 382 GLEE 385 (400)
Q Consensus 382 ~l~~ 385 (400)
++++
T Consensus 396 ~~~~ 399 (400)
T 3vax_A 396 LKPS 399 (400)
T ss_dssp ----
T ss_pred Hhcc
Confidence 8764
No 129
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=100.00 E-value=2.3e-32 Score=255.99 Aligned_cols=335 Identities=10% Similarity=0.006 Sum_probs=235.6
Q ss_pred HHHHHHHH-hcCC-CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEe
Q 015768 19 MVQIQELV-RGAK-NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVT 95 (400)
Q Consensus 19 ~~~~~~~~-~~~~-~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~ 95 (400)
+..+.... +.|. ++++++.+.++.+.++++++++. . |.. ...+++.+++.+++.+|. ++++++++
T Consensus 15 ~~~~~~~i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~----~-----~~~---~~~~~~~~~~~~a~~~g~~~~~~~~~~ 82 (374)
T 2aeu_A 15 RKIILEILNEKGRDALYDLSGLSGGFLIDEKDKALLN----T-----YIG---SSYFAEKVNEYGLKHLGGDENDKCVGF 82 (374)
T ss_dssp HHHHHHHHHHTCGGGCEECSSCCCCCCCCHHHHHHHT----S-----TTH---HHHHHHHHHHHHHHHHTCCTTEEEEEE
T ss_pred HHHHHHHHhccCccceeeecccCCCCCCCHHHHHHHH----H-----hcC---chHHHHHHHHHHHHHhCCCCcceEEEE
Confidence 33455543 5666 88999998888888999999885 1 211 134567777777777787 35889999
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCccchhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeE-EEEe
Q 015768 96 AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL-VSVV 171 (400)
Q Consensus 96 ~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~-v~l~ 171 (400)
+|+++++..++.++ +||+|+++.|+|+++.. .++..|++++.+ .|++++++. +++ +++ |+++
T Consensus 83 ~ggt~a~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~--~~~~v~~~ 148 (374)
T 2aeu_A 83 NRTSSAILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDK--DTLVIITG 148 (374)
T ss_dssp SSHHHHHHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCT--TEEEEEEC
T ss_pred cChHHHHHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCC--ccEEEEEc
Confidence 99999999999988 99999999998877554 667789888766 278889887 544 499 9999
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc--CCCCccccCCCcEEEEeccccccCCCcceeEEEEccCC
Q 015768 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSE 249 (400)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~ 249 (400)
+|+||||. +..++++|.++|++||+++|+|++|+.+.. .... .....+.+++++|+||+++ |+|+||++++
T Consensus 149 ~p~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~di~~~S~sK~l~--g~~~G~~~~~-- 221 (374)
T 2aeu_A 149 STMDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQP-PALKLGADLVVTSTDKLME--GPRGGLLAGK-- 221 (374)
T ss_dssp BCTTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCC-CHHHHTCSEEEEETTSSSS--SCSCEEEEEE--
T ss_pred cCCCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccC-CccccCCcEEEecCccccc--CcceEEEEEC--
Confidence 99999997 667799999999999999999999987742 1111 0112245688999999974 6899999988
Q ss_pred cHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcH-HHHHHHHHHHHH----HHHHHHHhccCC---CCcc-cCCCCce
Q 015768 250 VEGFATQLLKVQDNIPICASIISQHLALYSLQTGPE-WVTERVKDLVRN----REIIREALSPLG---EGAV-KGGEGAI 320 (400)
Q Consensus 250 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~----~~~l~~~L~~~~---~~~~-~~~~~~~ 320 (400)
+++++++.........+++++.+.++..+++.... ...+..+..+.. ++.+.+.|..+. ++.+ ..+.+.+
T Consensus 222 -~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~ 300 (374)
T 2aeu_A 222 -KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV 300 (374)
T ss_dssp -HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred -HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence 78888888766545556788888888888875322 222222222222 455566665541 2233 3455445
Q ss_pred EEEeeCCCCC--CCHHHHHHHHHHhcCeEEeCCCccC-CCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHh
Q 015768 321 YLWARLPEKH--LDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRISFGG--LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 321 ~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+.|..++... .+..+++.++++++||.+.||..|. .++++||+++. ..+.+++.+++.|+++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 301 IKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred EEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 5555443210 0112366667778999999998763 46799999975 223347777777777777654
No 130
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=1.6e-33 Score=269.81 Aligned_cols=348 Identities=16% Similarity=0.135 Sum_probs=245.1
Q ss_pred hcCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~ 102 (400)
.+|+.++||+.+.. +++ .+|++++++.+.+.+. ..|+...+..+.++++++++.+.++... +++++++|+++|+
T Consensus 40 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~ 117 (439)
T 3dxv_A 40 ENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDAN 117 (439)
T ss_dssp TTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHH
Confidence 35678999998875 454 7899999999998774 3354456678899999999999886655 7999999999999
Q ss_pred HHHHHHh--cCCCCEEEEeCCCccchhHHHHhcCcE---------------EEEeccCCCCCCCC----CHHHHHHhhc-
Q 015768 103 VNIVLTL--CDAGDSVVMFAPYYFNSYMSFQMTGVT---------------HILVGPCSSKTLHP----DADWLEKTLE- 160 (400)
Q Consensus 103 ~~~~~~l--~~~gd~vlv~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~~~~~~----~~e~l~~~l~- 160 (400)
+.++.++ ..+++.|++.+++|++........+.. +..+ |.+...... |+++|++.++
T Consensus 118 ~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~le~~l~~ 196 (439)
T 3dxv_A 118 EAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPD-PYRPYRNDPTGDAILTLLTEKLAA 196 (439)
T ss_dssp HHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCC-SSSCBTTBTTSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEc-CCCcccccccHHHHHHHHHHHHHh
Confidence 9999986 235678999999998876555443322 1223 333221111 6899999983
Q ss_pred c-CCCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768 161 T-KPTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 161 ~-~~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 238 (400)
. ...+++|++++++|++|.+. +.+++++|.++|++||+++|+||+|+++...+........+....+.|+||.+| +|
T Consensus 197 ~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~-~G 275 (439)
T 3dxv_A 197 VPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLG-GG 275 (439)
T ss_dssp SCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGG-TT
T ss_pred cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhc-CC
Confidence 1 12247777777788888765 566699999999999999999999987655443222111111112238999998 79
Q ss_pred ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCccc
Q 015768 239 WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVK 314 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~ 314 (400)
+|+||++.+ +++++.+.......++ .+++.+.++.++++...+ +++.++++++.+++++.|++ ++.+...
T Consensus 276 ~riG~~~~~---~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 349 (439)
T 3dxv_A 276 LPLSAVIAP---AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR--DDLPAMAERKGRLLRDGLSELAKRHPLIGDI 349 (439)
T ss_dssp SCCEEEEEE---HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred cceEEEEEC---HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 999999998 7888777665555677 899999998888874221 33444555555555555544 4543444
Q ss_pred CCCCceEEEeeCCC-------CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPE-------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 315 ~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+. +.++++.+.. ...+..++...++ ++||.+.|+.. .++++||+++. .+++++++++++|+++++++
T Consensus 350 ~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~--~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 350 RGR-GLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGM--NGNVLEFTPPLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp EEE-TTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred EEE-EEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 444 6667666521 1112456777776 67999998753 25899999776 79999999999999999987
Q ss_pred hc
Q 015768 387 VK 388 (400)
Q Consensus 387 ~~ 388 (400)
.+
T Consensus 426 ~~ 427 (439)
T 3dxv_A 426 SA 427 (439)
T ss_dssp GG
T ss_pred hc
Confidence 54
No 131
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=5.6e-33 Score=261.34 Aligned_cols=329 Identities=13% Similarity=0.064 Sum_probs=240.3
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
++.+.|..+ +.+.++++++++.+.... .+.+. ....++++.++++++...+++++++++|+|+|++++.++.
T Consensus 4 ~~~~~~~p~--p~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~ 77 (385)
T 2bkw_A 4 SVDTLLIPG--PIILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFAS 77 (385)
T ss_dssp CCCEECSSS--SCCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHH
T ss_pred ccceeecCC--CcCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHH
Confidence 445566665 344568888877665432 12111 1245567777777766556667899999999999999999
Q ss_pred Hhc---CCCCEEEEe-CCCccch-hHHHHhcCcEEEEeccC-CCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCCCCCccC
Q 015768 108 TLC---DAGDSVVMF-APYYFNS-YMSFQMTGVTHILVGPC-SSKTLHPDADWLEKTLET-KPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 108 ~l~---~~gd~vlv~-~p~~~~~-~~~~~~~g~~~~~~~~~-~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG~~ 180 (400)
++. ++||+|++. .+.|+.. ...++..|++++.+ |. ++ ++.+|++++++.+++ ++ ++|++++++||||.+
T Consensus 78 ~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~~d~~~l~~~l~~~~~--~~v~~~~~~nptG~~ 153 (385)
T 2bkw_A 78 NFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVV-RPLKI-GESVPLELITEKLSQNSY--GAVTVTHVDTSTAVL 153 (385)
T ss_dssp HHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEE-CCSST-TSCCCHHHHHHHHHHSCC--SEEEEESEETTTTEE
T ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEE-ecCCC-CCCCCHHHHHHHHhcCCC--CEEEEEccCCCcCeE
Confidence 998 899999888 5555555 36778889999999 88 54 456899999999976 44 999999999999999
Q ss_pred CCHHHHHHHHHHHHHc--CCEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHH-H
Q 015768 181 IPERLLKRISDLCKAA--GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFAT-Q 256 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~--~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~-~ 256 (400)
.| +++|.++|++| |+++|+|++|+... .+......+.+++++|+||+++ ++| +||++.+ ++.++ +
T Consensus 154 ~~---l~~i~~~~~~~~~~~~li~D~a~~~~~---~~~~~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~---~~~~~~~ 222 (385)
T 2bkw_A 154 SD---LKAISQAIKQTSPETFFVVDAVCSIGC---EEFEFDEWGVDFALTASQKAIGAPAG--LSISLCS---SRFMDYA 222 (385)
T ss_dssp CC---HHHHHHHHHHHCTTSEEEEECTTTTTT---SCCCTTTTTCSEEEEESSSTTCCCSC--EEEEEEC---HHHHHHH
T ss_pred cC---HHHHHHHHHhhCCCCEEEEECccccCC---ccccccccCceEEEecCccccccCCc--ceEEEEc---HHHHHHH
Confidence 99 88999999999 99999999998432 1222222356789999999774 345 5999988 55554 3
Q ss_pred HH----------------------Hhhc---cCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHh-ccCC
Q 015768 257 LL----------------------KVQD---NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREAL-SPLG 309 (400)
Q Consensus 257 l~----------------------~~~~---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L-~~~~ 309 (400)
+. .... ....+.+...+.++..+++...++ +++..++++++++++.+.| ++++
T Consensus 223 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 302 (385)
T 2bkw_A 223 LNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQ 302 (385)
T ss_dssp TCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 31 1111 012456777777777777642233 5677888899999999999 8874
Q ss_pred CCcccCC-----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-CCCeEEEE-ec----cCCHHHHHHHHHH
Q 015768 310 EGAVKGG-----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-CRGHLRIS-FG----GLVEDDCKAAADR 378 (400)
Q Consensus 310 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-~~~~iRi~-~~----~~~~~~~~~~~~~ 378 (400)
+.+..+ ..++++++.++. ..++..+|. ++||.+.+|..+. .++++|++ ++ .++++++++++++
T Consensus 303 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~-~~gi~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~ 376 (385)
T 2bkw_A 303 -LTSVSRYPSNMSAHGLTAVYVAD----PPDVIAFLK-SHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDL 376 (385)
T ss_dssp -CEESSCSSSTTBCSSCEEEECSC----HHHHHHHHH-HTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHH
T ss_pred -ceecccCcccccCCceEEEecCC----HHHHHHHHH-HCCeEEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHH
Confidence 455532 247788888863 677888775 7899999987653 46799999 76 2589999999999
Q ss_pred HHHHHHH
Q 015768 379 LRRGLEE 385 (400)
Q Consensus 379 l~~~l~~ 385 (400)
|++++++
T Consensus 377 l~~~~~~ 383 (385)
T 2bkw_A 377 IKLALQR 383 (385)
T ss_dssp HHHHTTC
T ss_pred HHHHHHh
Confidence 9988754
No 132
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=1.2e-33 Score=270.31 Aligned_cols=346 Identities=13% Similarity=0.125 Sum_probs=241.3
Q ss_pred cCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+++.++||+.+.. +++ .+|++++++.+.+.+... + ...+..+.+.++++.+.+.++.++++|++++|+++|++.
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~ 117 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDH--L-FSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEA 117 (433)
T ss_dssp TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCC--C-CTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHH
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcc--c-ccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHH
Confidence 4677889977763 444 589999999998865321 1 112234566777777777778778999999999999999
Q ss_pred HHHHhc--CCCCEEEEeCCCccchhHHHHhc--------------CcEEEEeccCCCC-CCC--------CCHHHHHHhh
Q 015768 105 IVLTLC--DAGDSVVMFAPYYFNSYMSFQMT--------------GVTHILVGPCSSK-TLH--------PDADWLEKTL 159 (400)
Q Consensus 105 ~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~--------------g~~~~~~~~~~~~-~~~--------~~~e~l~~~l 159 (400)
+++++. ..+++|++.+|+|++........ |+..+.+ |.... .+. +|++.+++.+
T Consensus 118 a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~d~~~le~~l 196 (433)
T 1zod_A 118 AIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPA-PFTYRPRFERNGAYDYLAELDYAFDLI 196 (433)
T ss_dssp HHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECC-CCTTSCCCEETTEECHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecC-CcccccccCCchhhhHHHHHHHHHHHH
Confidence 998764 34589999999998866543321 3444333 22110 111 3589999988
Q ss_pred ccC--CCCeEEEEeCC-CCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccC
Q 015768 160 ETK--PTPKLVSVVNP-GNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG 235 (400)
Q Consensus 160 ~~~--~~~~~v~l~~p-~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g 235 (400)
+.. ..+++|+ ++| +||+|. +++.+++++|.++|++||+++|+||+|+++...+........+....+.|+||.+|
T Consensus 197 ~~~~~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~ 275 (433)
T 1zod_A 197 DRQSSGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLG 275 (433)
T ss_dssp HHHCCSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHH
T ss_pred HhcCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEeccccc
Confidence 731 2235555 455 688996 67899999999999999999999999997765443221111111122348899998
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhh--ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----C
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQ--DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----G 309 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~ 309 (400)
+|+|+||++.+ +++++.+.... ...+++.+++++.++.++++...+ ....++++++++++++.|+++ +
T Consensus 276 -~G~~ig~~~~~---~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~l~~~l~~l~~~~~ 349 (433)
T 1zod_A 276 -AGLPLAAIVTS---AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR--DGLVARANVMGDRLRRGLLDLMERFD 349 (433)
T ss_dssp -TTSSCEEEEEC---HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred -CCCCeeEEEEh---HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 59999999998 78888887633 225777899999988888864211 234566666777777776653 4
Q ss_pred CCcccCCCCceEEEeeCCCC-------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 310 EGAVKGGEGAIYLWARLPEK-------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
.+....+. +.++|+.++.. ..+..++...++ ++||.+.||..|+.++++||+++. .+++++++++++|++
T Consensus 350 ~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~ 427 (433)
T 1zod_A 350 CIGDVRGR-GLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ 427 (433)
T ss_dssp TEEEEEEE-TTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CeEEEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHH
Confidence 33334444 67778877531 112567888776 789999998876556899998775 799999999999999
Q ss_pred HHHHH
Q 015768 382 GLEEL 386 (400)
Q Consensus 382 ~l~~~ 386 (400)
+++++
T Consensus 428 ~l~~~ 432 (433)
T 1zod_A 428 AIERA 432 (433)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98764
No 133
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=3.9e-33 Score=265.43 Aligned_cols=333 Identities=16% Similarity=0.122 Sum_probs=243.7
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. ++++ .+|++++++.+.+.+... ++ .....+.++++++.+.+..| .+++++++|+++|++
T Consensus 54 ~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~ 128 (420)
T 2pb2_A 54 QQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWH--TS-NVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANE 128 (420)
T ss_dssp TTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCC--CC-TTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhccc--cc-CccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHH
Confidence 3567899998874 3443 689999999999876421 11 11234667777777777766 589999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEeCCCccchhH-HHHhcCcE------------EEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 104 NIVLTLCD-------AG-DSVVMFAPYYFNSYM-SFQMTGVT------------HILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 104 ~~~~~l~~-------~g-d~vlv~~p~~~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
.++.++.. +| ++|++.+|+|++... .+...|.. +..+ |. .|+++|++.++++
T Consensus 129 ~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~-~~------~d~~~le~~i~~~ 201 (420)
T 2pb2_A 129 TAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHV-PF------NDLHAVKAVMDDH 201 (420)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEE-CT------TCHHHHHHHCCTT
T ss_pred HHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEe-cC------CCHHHHHHHhccC
Confidence 99998875 67 599999999988654 34444532 4444 32 2799999999764
Q ss_pred CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcc
Q 015768 163 PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 163 ~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~ 239 (400)
+++|++++++|++|. +++.+++++|.++|++||+++|+||+|.++...+.... ......+++ |+||.+| +|+
T Consensus 202 --~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l~-~G~ 276 (420)
T 2pb2_A 202 --TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKALG-GGF 276 (420)
T ss_dssp --EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-TTS
T ss_pred --ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eeccccc-CCC
Confidence 489988888888884 68999999999999999999999999987765443221 111122333 7899998 899
Q ss_pred eeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccC
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKG 315 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~ 315 (400)
|+||++.+ +++++.+.......+++.+++.+.++.++|+...+ ++..++++++++++.+.|+++ +.+....
T Consensus 277 ~iG~~~~~---~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 351 (420)
T 2pb2_A 277 PVSAMLTT---QEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT--PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIR 351 (420)
T ss_dssp CCEEEEEC---HHHHTTCC----CCEECCCHHHHHHHHHHHHHHSS--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred ceEEEEEh---HHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999998 66766655433445778899999998888874222 356677778888888877764 3322334
Q ss_pred CCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 316 GEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 316 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+. +.++++.++... .+..++...|. ++||.+.++. ++++||+++. .+++++++++++|+++++++.
T Consensus 352 ~~-g~~~~v~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~~ 419 (420)
T 2pb2_A 352 GM-GLLIGAELKPKYKGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQAVGKVV 419 (420)
T ss_dssp EE-TTEEEEEECGGGTTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ec-ceEEEEEECCCchHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 44 677788876421 24678888886 6999999864 6899999775 799999999999999988753
No 134
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=3.4e-32 Score=256.47 Aligned_cols=322 Identities=13% Similarity=0.127 Sum_probs=237.3
Q ss_pred CCCCCCC-c---HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCC
Q 015768 38 GVVYWQP-P---KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDA 112 (400)
Q Consensus 38 ~~~~~~~-~---~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~ 112 (400)
++++++. | +++++++.+.+.++. ..|.+..+..++++++++++ |.+ +.|++++ ||+|++.++.++ .++
T Consensus 5 ~~p~f~~~p~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~----~~~-~~i~~~s-Gt~al~~~l~~l~~~~ 77 (388)
T 1b9h_A 5 KAPEFPAWPQYDDAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHH----GAA-HALAVTN-GTHALELALQVMGVGP 77 (388)
T ss_dssp CCCCCCCSSCCCHHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHT----TCS-EEEEESC-HHHHHHHHHHHTTCCT
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHh----CCC-eEEEeCC-HHHHHHHHHHHcCCCC
Confidence 4566765 5 899999999987642 34656677888999999987 443 4555555 589999999999 899
Q ss_pred CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768 113 GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (400)
Q Consensus 113 gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l 192 (400)
||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++ ++|+ |+||||.+.+ +++|.++
T Consensus 78 gd~Vi~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~n~tG~~~~---l~~i~~l 148 (388)
T 1b9h_A 78 GTEVIVPAFTFISSSQAAQRLGAVTVPV-DVDAATYNLDPEAVAAAVTPRT--KVIM---PVHMAGLMAD---MDALAKI 148 (388)
T ss_dssp TCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEEC---CBCGGGCCCC---HHHHHHH
T ss_pred cCEEEECCCccHHHHHHHHHcCCEEEEE-ecCCCcCCCCHHHHHHhcCcCc--eEEE---EeCCccCcCC---HHHHHHH
Confidence 9999999999999999999999999999 8887667889999999997654 7766 8999999998 8999999
Q ss_pred HHHcCCEEEEcccccccc-cCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH--HHHHHHhhcc------
Q 015768 193 CKAAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF--ATQLLKVQDN------ 263 (400)
Q Consensus 193 ~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~--~~~l~~~~~~------ 263 (400)
|++||+++|+|++|+.+. +.+..... .+ ++++.||||..+++|.++||++.++ +.+ ++.+......
T Consensus 149 a~~~~~~li~D~a~~~g~~~~~~~~~~--~~-~i~~~S~s~~K~l~g~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 223 (388)
T 1b9h_A 149 SADTGVPLLQDAAHAHGARWQGKRVGE--LD-SIATFSFQNGKLMTAGEGGAVVFPD--GETEKYETAFLRHSCGRPRDD 223 (388)
T ss_dssp HHHHTCCBCEECTTCTTCEETTEEGGG--SS-SCEEEECCTTSSSCSSSCEEEEECT--TCHHHHHHHHHHTBTTCCTTC
T ss_pred HHHcCCEEEEecchhcCCccCCeeccc--cc-ceEEEEccCCCcccCCCeEEEEECC--HHHHHHHHHHHHHhCCCCccC
Confidence 999999999999998643 33222111 11 4677787744444566899999884 335 5555433221
Q ss_pred ---------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC------CCCceEEEeeCCC
Q 015768 264 ---------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG------GEGAIYLWARLPE 328 (400)
Q Consensus 264 ---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~------~~~~~~~~~~~~~ 328 (400)
.++..+.+...++...++ ++++..++++++++++.+.|++++++.+.. +.+++++|+.++.
T Consensus 224 ~~~~~~~~g~~~~~~~~~~a~~~~~~~----~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (388)
T 1b9h_A 224 RRYFHKIAGSNMRLNEFSASVLRAQLA----RLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPG 299 (388)
T ss_dssp SSCCCCSCCCBCBCBHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTT
T ss_pred ccceeecccccCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCC
Confidence 112245454444433333 356777888889999999999886555554 3447899999975
Q ss_pred CC-CCHHHHHHHHHHhcCeEEeCCCccC--C---------------------------CCeEEEEecc-C-CHHHHHHHH
Q 015768 329 KH-LDDFEVVRWLAHRHGVVVIPGGACG--C---------------------------RGHLRISFGG-L-VEDDCKAAA 376 (400)
Q Consensus 329 ~~-~~~~~~~~~l~~~~gi~v~~g~~~~--~---------------------------~~~iRi~~~~-~-~~~~~~~~~ 376 (400)
.. .+.+++...|. ++||.+.++.... . .+.+||+++. + |++|++.++
T Consensus 300 ~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~ 378 (388)
T 1b9h_A 300 LTEERRNALVDRLV-EAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATA 378 (388)
T ss_dssp CCHHHHHHHHHHHH-HTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHH
T ss_pred cCcccHHHHHHHHH-HCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHH
Confidence 21 14567888776 7899998765321 0 1359999987 8 899999999
Q ss_pred HHHHHHHHH
Q 015768 377 DRLRRGLEE 385 (400)
Q Consensus 377 ~~l~~~l~~ 385 (400)
+.|++++++
T Consensus 379 ~~l~~~~~~ 387 (388)
T 1b9h_A 379 EIIADAVAR 387 (388)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999998764
No 135
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=1.8e-33 Score=268.92 Aligned_cols=339 Identities=13% Similarity=0.076 Sum_probs=224.9
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCC-----CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGAD-----EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-----~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.++.+.|+.+.+. ++|+.+++++.+.+.+. ..|+.. .+..+..+.+.+.+++.+|++++++++|+|+++++.
T Consensus 16 ~~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~ 92 (432)
T 3a9z_A 16 PNRKVYMDYNATT-PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNN 92 (432)
T ss_dssp --CCEECBTTTCC-CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHH
T ss_pred CCCcEEeeCCccC-CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHH
Confidence 3577888888766 67899999999887642 222211 112223344444455555888889999999999999
Q ss_pred HHHHHhc--------CCCCEEEEeCCCccch-----------------hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768 104 NIVLTLC--------DAGDSVVMFAPYYFNS-----------------YMSFQMTGVTHILVGPCSSKTLHPDADWLEKT 158 (400)
Q Consensus 104 ~~~~~l~--------~~gd~vlv~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~ 158 (400)
.++.++. ++||+|+++.|+|+++ ....+..|++++.+ |.+++++.+|++.|++.
T Consensus 93 ~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v-~~~~~~~~~d~~~l~~~ 171 (432)
T 3a9z_A 93 LVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFV-PVSKVNGQVEVEDILAA 171 (432)
T ss_dssp HHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEE-CCCTTTSSCCHHHHHHT
T ss_pred HHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEE-ecCcccCCcCHHHHHHh
Confidence 9999986 5899999999999764 23334578999999 88763457899999999
Q ss_pred hccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC----------CEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 159 LETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG----------SWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 159 l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~----------~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
+++++ ++|++++|+||||.++| +++|.++|+++| +++|+|++|+.+.. +......+.++++.
T Consensus 172 i~~~~--~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~---~~~~~~~~~d~~~~ 243 (432)
T 3a9z_A 172 VRPTT--CLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR---RVDVEDLGVDFLTI 243 (432)
T ss_dssp CCTTE--EEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS---CCCHHHHCCSEEEE
T ss_pred ccCCc--eEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc---ccChhhcCCCEEEE
Confidence 98654 99999999999999999 778889999999 99999999975421 11111123457789
Q ss_pred ccccccCCCcceeEEEEccCCcHHH-HHHHHHh-------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMGWRVGYIAYPSEVEGF-ATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i~~~~~~~~~-~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
|+||++| .++||++.++ +. ...+... .....++.+.+.+.++..+++...+++++..+++.+++++
T Consensus 244 s~~K~~g---~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~ 317 (432)
T 3a9z_A 244 VGHKFYG---PRIGALYVRG---VGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDY 317 (432)
T ss_dssp EGGGTTC---CSCEEEEETT---BTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehhHhcC---CcceEEEEcc---ccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999875 4589999884 22 2222211 1122355677777777777764345677888889999999
Q ss_pred HHHHhccCCCCcc--cCC-----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-----------------
Q 015768 301 IREALSPLGEGAV--KGG-----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC----------------- 356 (400)
Q Consensus 301 l~~~L~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~----------------- 356 (400)
+.+.|+++.+..+ ..+ ..+..+++.++....+..++...+ .++.+..|..|..
T Consensus 318 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~ 394 (432)
T 3a9z_A 318 LEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC---QTLLASVGASCHSDHEDRPSPVLLSCGIPV 394 (432)
T ss_dssp HHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC---SSEECBSSCGGGGGGTTSCCHHHHHTTCCH
T ss_pred HHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh---cCeEEeccccccCCCCCCccHHHHhcCCCc
Confidence 9999987532222 122 123345555553222455555533 3777777754421
Q ss_pred ---CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 357 ---RGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 357 ---~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.+++||+++. ++++++++++++|+++++++.+
T Consensus 395 ~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 395 DVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp HHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred cccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3789999997 6899999999999999987643
No 136
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=1.1e-33 Score=271.53 Aligned_cols=349 Identities=10% Similarity=0.020 Sum_probs=239.8
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
.+|+.++||+.+. +.++ .+|++++++.+.+.+. ..|+...+..+.+.++++++.+.++.. .+++++|+|+++|+
T Consensus 61 ~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~ 138 (453)
T 4ffc_A 61 ADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAV 138 (453)
T ss_dssp TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred CCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHH
Confidence 3467899999874 5554 5899999999988763 234444456678888888888887654 58999999999999
Q ss_pred HHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCc--------------EEEEeccCCC---CCCCCC--------HHHH
Q 015768 103 VNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS---KTLHPD--------ADWL 155 (400)
Q Consensus 103 ~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~---~~~~~~--------~e~l 155 (400)
+.+++.+.. .++.|++.+++|++........+. .+..+ |.+. +.+..+ ++.+
T Consensus 139 ~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~l 217 (453)
T 4ffc_A 139 ENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRM-PASYPLRDEPGLTGEEAARRAISRI 217 (453)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEE-CCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEe-CCCccccCccccchHHHHHHHHHHH
Confidence 999987753 458999999999987765543321 23334 4321 111112 3555
Q ss_pred HHhhccCCCCeEEEEeCCCCCCc--cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccc
Q 015768 156 EKTLETKPTPKLVSVVNPGNPSG--TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKA 233 (400)
Q Consensus 156 ~~~l~~~~~~~~v~l~~p~nptG--~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 233 (400)
++.+..++ .+++++.|.|++| ...+.+++++|.++|++||+++|+||+|.++...+........+....+.++||.
T Consensus 218 ~~~i~~~~--~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~ 295 (453)
T 4ffc_A 218 ETQIGAQS--LAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKG 295 (453)
T ss_dssp HHHTCGGG--EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGG
T ss_pred HHhcCCCC--EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhh
Confidence 55554433 5555666766655 4568889999999999999999999999987654432211111222224578999
Q ss_pred cCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHHhccCCCC
Q 015768 234 YGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNREIIREALSPLGEG 311 (400)
Q Consensus 234 ~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (400)
++ +|+|+||++++ +++++.+.......+++.+++++.++.++|+... +..++..+.....++.+.+.++.++.+
T Consensus 296 ~~-~G~~~G~~~~~---~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 371 (453)
T 4ffc_A 296 IA-GGMPLSAVTGR---AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDII 371 (453)
T ss_dssp GG-TTSSCEEEEEE---HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSE
T ss_pred hc-CCcCeEEEEEC---HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 98 58999999998 7888877766667788999999999999887421 223333333333344444444445543
Q ss_pred cccCCCCceEEEeeCCCC------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEK------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
....+. +.++++.+... .....++...++ ++||.+.|+..+ ++++||+++. .+++++++++++|+++++
T Consensus 372 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 447 (453)
T 4ffc_A 372 GEVRGR-GAMLAIEIVKPGTLEPDAALTKSIAAEAL-SQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGITALSDIIR 447 (453)
T ss_dssp EEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECCEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEee-ceEEEEEEecCcccCCCHHHHHHHHHHHH-hCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 444444 66777766320 012456777665 789999987643 4789999886 799999999999999998
Q ss_pred HHhc
Q 015768 385 ELVK 388 (400)
Q Consensus 385 ~~~~ 388 (400)
++.+
T Consensus 448 ~~~~ 451 (453)
T 4ffc_A 448 AKAS 451 (453)
T ss_dssp HHC-
T ss_pred HHHh
Confidence 8653
No 137
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2.1e-32 Score=255.15 Aligned_cols=327 Identities=11% Similarity=0.034 Sum_probs=241.8
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHHHHHh
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~~~~l 109 (400)
+.+.|..+ +.+.|+++++++.+.+.++....+.......++.+++.+++++.+|.+ ++++++|+|+|++++.++.++
T Consensus 4 ~~~~~~p~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l 81 (362)
T 3ffr_A 4 NKIYFTPG--PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNC 81 (362)
T ss_dssp CCEEECSS--SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHH
T ss_pred cceeccCC--CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhc
Confidence 34555544 345678999888888776531111123334467778888888888874 688999999999999999999
Q ss_pred cCCCCEEEEeCCCcc-chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 110 CDAGDSVVMFAPYYF-NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.++ +.+++..+.|. .+...++..|++++.+ +.+++ +.+|+++++ +++++ ++|++++|+||||.++| +++
T Consensus 82 ~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~-~~~d~~~l~--~~~~~--~~v~~~~~~nptG~~~~---l~~ 151 (362)
T 3ffr_A 82 VEK-KSFHCVNGSFSKRFYEFAGELGREAYKE-EAAFG-KGFYPADIT--VPADA--EIICLTHNETSSGVSMP---VED 151 (362)
T ss_dssp CSS-EEEEEECSHHHHHHHHHHHHTTCEEEEE-ECCTT-CCCCGGGCC--CCTTC--CEEEEESEETTTTEECC---HHH
T ss_pred cCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEE-ecCCC-CCCCHHHHh--ccCCc--cEEEEEcCCCCcceeCC---HHH
Confidence 988 44555555554 2335667789999999 77644 478999988 55554 99999999999999999 888
Q ss_pred HHHHHHHc-CCEEEEcccccccccCCCCccccCCCcEEEEeccccccC-CCcceeEEEEccCCcHHHHHHHHHhhc----
Q 015768 189 ISDLCKAA-GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVGYIAYPSEVEGFATQLLKVQD---- 262 (400)
Q Consensus 189 i~~l~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G~i~~~~~~~~~~~~l~~~~~---- 262 (400)
|.++|++| |+++|+|++|+.+... ... ...+++++|+||+++ ++| +|+++.+ +++++++.....
T Consensus 152 i~~la~~~p~~~li~D~a~~~~~~~---~~~--~~~d~~~~s~~K~~~~~~G--~g~~~~~---~~~~~~~~~~~~gg~~ 221 (362)
T 3ffr_A 152 INTFRDKNKDALIFVDAVSSLPYPK---FDW--TKIDSVFFSVQKCFGLPAG--LGVWILN---DRVIEKSKALLAKRKS 221 (362)
T ss_dssp HTTSGGGSTTSEEEEECTTTTTSSC---CCT--TSCSEEEEETTSTTCCCSC--CEEEEEE---HHHHHHHHHHHHTTCC
T ss_pred HHHHHHhCCCCEEEEecccccCCcc---cCh--hHCcEEEEecccccCCCCc--eEEEEEC---HHHHHHhhhccccCCC
Confidence 99999999 9999999998854321 111 125688999999997 566 5778777 677777665432
Q ss_pred -----------------cCCcCccHHHHHHHHHHhcCCc-HHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCce
Q 015768 263 -----------------NIPICASIISQHLALYSLQTGP-EWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAI 320 (400)
Q Consensus 263 -----------------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~ 320 (400)
....+++...+.++..+++... ..++++.+++.++++++.+.|++++++.+..+ ....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 301 (362)
T 3ffr_A 222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMT 301 (362)
T ss_dssp CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSS
T ss_pred CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCc
Confidence 1145667777777766665211 22578888899999999999999866455442 2356
Q ss_pred EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 321 YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
++++.++. +..++.+.|. ++||.+.+|..+..++++|++++. ++++++++++++|++++
T Consensus 302 ~~~~~~~~---~~~~~~~~l~-~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 302 TIVANTTM---LPGEINKILE-PFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp EEEEEESS---CHHHHHHHHG-GGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred eEEEecCC---CHHHHHHHHH-HCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 77888875 6788888886 669999999777678999999987 78999999999888753
No 138
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=100.00 E-value=8.7e-33 Score=261.46 Aligned_cols=327 Identities=15% Similarity=0.152 Sum_probs=246.4
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.++++|+.+.++++ +++++++.+.+... .|.+..+..++++++++++ +. +++++++++++++..++.++
T Consensus 30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~----~~--~~~v~~~~Gt~a~~~~l~~~ 98 (399)
T 2oga_A 30 VPFLDLKAAYEELR--AETDAAIARVLDSG---RYLLGPELEGFEAEFAAYC----ET--DHAVGVNSGMDALQLALRGL 98 (399)
T ss_dssp BCSCCHHHHHHHTH--HHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHT----TS--SEEEEESCHHHHHHHHHHHT
T ss_pred CcccccCcCCCCCC--HHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHH----CC--CeEEEecCHHHHHHHHHHHh
Confidence 57889988877654 88999998887642 4655566778888888876 44 36788888999999999999
Q ss_pred -cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 110 -CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 110 -~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.++||+|+++.|+|+++...++..|++++.+ |.+++++.+|++.+++.+++++ ++|+ ++||||.+.+ +++
T Consensus 99 ~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~n~tG~~~~---l~~ 169 (399)
T 2oga_A 99 GIGPGDEVIVPSHTYIASWLAVSATGATPVPV-EPHEDHPTLDPLLVEKAITPRT--RALL---PVHLYGHPAD---MDA 169 (399)
T ss_dssp TCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCSSSSSBCHHHHHHHCCTTE--EEEC---CBCGGGCCCC---HHH
T ss_pred CCCCcCEEEECCCccHHHHHHHHHCCCEEEEE-ecCCCCCCcCHHHHHHhcCCCC--eEEE---EeCCcCCccC---HHH
Confidence 8999999999999999999999999999999 8876566789999999997644 7776 5789999999 899
Q ss_pred HHHHHHHcCCEEEEcccccccc-cCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-- 263 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~-- 263 (400)
|.++|+++|+++|+|++|+.+. +.+... ..-.++++.|+ ||++|.+| ++||++.++ +++.+++......
T Consensus 170 i~~l~~~~~~~li~Dea~~~g~~~~~~~~---~~~~di~~~S~~~sK~~~~~G-~~g~~~~~~--~~~~~~l~~~~~~g~ 243 (399)
T 2oga_A 170 LRELADRHGLHIVEDAAQAHGARYRGRRI---GAGSSVAAFSFYPGKNLGCFG-DGGAVVTGD--PELAERLRMLRNYGS 243 (399)
T ss_dssp HHHHHHHHTCEECEECTTCTTCEETTEET---TCTTCEEEEECCTTSSSCCSS-CCEEEEESC--HHHHHHHHHHHBTTC
T ss_pred HHHHHHHcCCEEEEECcccccCccCCeec---ccccCEEEEeCCCCccCCcCC-ceEEEEeCC--HHHHHHHHHHHhcCc
Confidence 9999999999999999998653 332211 11135888898 79998668 899998865 6787777665432
Q ss_pred ----------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCCCCC
Q 015768 264 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLD 332 (400)
Q Consensus 264 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 332 (400)
.++..+.+...++..+++. +++..++.+++++++.+.|++++++.+. .+..+.++|+.++....+
T Consensus 244 ~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (399)
T 2oga_A 244 RQKYSHETKGTNSRLDEMQAAVLRIRLAH----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTER 319 (399)
T ss_dssp SSTTCCCSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSS
T ss_pred cccccccccccCCCcCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECCC
Confidence 1235577777777667754 3455666777888999999987654543 233355554332211125
Q ss_pred HHHHHHHHHHhcCeEEeCCCcc-----------C-----C-------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 333 DFEVVRWLAHRHGVVVIPGGAC-----------G-----C-------RGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 333 ~~~~~~~l~~~~gi~v~~g~~~-----------~-----~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
..++...|. ++||.+.++... + . .+++||+++. ++++|++.+++.|+++++++.
T Consensus 320 ~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 320 RDELRSHLD-ARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERVD 397 (399)
T ss_dssp HHHHHHHHH-HTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHH-HCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 778888775 789999875421 0 0 2579999986 899999999999999987643
No 139
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=1.2e-32 Score=266.08 Aligned_cols=362 Identities=17% Similarity=0.156 Sum_probs=262.2
Q ss_pred HHHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHH
Q 015768 8 AKRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKL 81 (400)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l 81 (400)
++++.......+..+.+..+.+.+.|+|..+.+. .|+.|++++.+.+.+....+ |+.....+++++.+.+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~ 99 (483)
T 1rv3_A 22 AQPLKDSDAEVYDIIKKESNRQRVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRA 99 (483)
T ss_dssp TSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHH
Confidence 3455555666777777776666788999877653 57999999999887642112 333334567888888999
Q ss_pred HhhcCCCCCc----EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH--------HHhcC--cEEEEeccCCCCC
Q 015768 82 NQENKLYKSS----VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS--------FQMTG--VTHILVGPCSSKT 147 (400)
Q Consensus 82 ~~~~~~~~~~----i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~--------~~~~g--~~~~~~~~~~~~~ 147 (400)
++.+|+++++ |++++|+ +++..++.++++|||+|++++++|.++... ++..| +.++.+ +.++++
T Consensus 100 a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~-~~~~~~ 177 (483)
T 1rv3_A 100 LQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAY-KVNPDT 177 (483)
T ss_dssp HHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEE-CBCTTT
T ss_pred HHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEEC-ccccCC
Confidence 9999988643 7777766 899998999999999999999999887642 23334 566666 667566
Q ss_pred CCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCCCccccCCCcEE
Q 015768 148 LHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVV 225 (400)
Q Consensus 148 ~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i 225 (400)
+.+|+++|++.++ .++ |+|++ +++|++ .++| +++|.++|+++|+++|+|++|+... ..+...... ...++
T Consensus 178 ~~iD~d~le~~i~~~~t--klIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~-~~~di 249 (483)
T 1rv3_A 178 GYIDYDRLEENARLFHP--KLIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF-EHCHV 249 (483)
T ss_dssp CSBCHHHHHHHHHHHCC--SEEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG-GTCSE
T ss_pred CcCCHHHHHHHHhhcCC--cEEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCC-CCCcE
Confidence 7899999999998 665 99998 888888 8889 8999999999999999999987333 323221111 14568
Q ss_pred EEeccccccCCCcceeEEEEccCCcH------------HHHHHHHHhhc-cCCcCccHHHHHHHHHHhcC-CcHHHHHHH
Q 015768 226 NLFSFSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQD-NIPICASIISQHLALYSLQT-GPEWVTERV 291 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~G~i~~~~~~~------------~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~ 291 (400)
+++|+||++ .|+|.||+++++... ++.+.+..... ....+++...+.++..++.. ...+++++.
T Consensus 250 v~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~ 327 (483)
T 1rv3_A 250 VTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ 327 (483)
T ss_dssp EEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred EEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence 899999988 477889999885311 24444443221 12334455555555556653 235678889
Q ss_pred HHHHHHHHHHHHHhccCCCCcccCCC-CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCCccC-CCCeEEEEec
Q 015768 292 KDLVRNREIIREALSPLGEGAVKGGE-GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGACG-CRGHLRISFG 365 (400)
Q Consensus 292 ~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~~-~~~~iRi~~~ 365 (400)
+++.++++++.+.|++++. .+..+. ...++++.++....+..++...| ++.||.+. ||..+. .++++||+++
T Consensus 328 ~~~~~~~~~l~~~L~~~g~-~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L-~~~gI~v~~~~~pg~~~~~~~~~iRis~~ 405 (483)
T 1rv3_A 328 RQVVANCRALSAALVELGY-KIVTGGSDNHLILVDLRSKGTDGGRAEKVL-EACSIACNKNTCPGDKSALRPSGLRLGTP 405 (483)
T ss_dssp HHHHHHHHHHHHHHHHTTC-EEGGGSCSSSEEEEEGGGGTCCHHHHHHHH-HHTTEECEEECCSSCSCTTSCCEEEEECH
T ss_pred HHHHHHHHHHHHHHHhcCC-EeccCCCCCceEEEeccCCCCCHHHHHHHH-HhCCcEEecCCCCCCCcCCCCceEEeecC
Confidence 9999999999999998854 555442 34677888864334677776655 58999999 876432 4679999998
Q ss_pred c-CC----HHHHHHHHHHHHHHHHH
Q 015768 366 G-LV----EDDCKAAADRLRRGLEE 385 (400)
Q Consensus 366 ~-~~----~~~~~~~~~~l~~~l~~ 385 (400)
. ++ ++|++++++.|.+++..
T Consensus 406 ~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 406 ALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCHHHHHHHHHHHHHHHHh
Confidence 5 45 89999999999999976
No 140
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=4.1e-33 Score=263.36 Aligned_cols=335 Identities=12% Similarity=0.077 Sum_probs=241.0
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+++.+++|+.+. ++++ +|+.+++++.+.+.+... ++. .......+++++.+++.++++++++++++|+++|+..
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~ 119 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMA--MPQ-TLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEA 119 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCC--CCT-TSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCC--Ccc-ccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHH
Confidence 456789998876 5565 889999999998865321 111 1123556667777777777778999999999999999
Q ss_pred HHHHhc--CCCCEEEEeCCCccchh-HHHHhcCcEEEE---eccCCCCC---CCCCHHHHHHhhccCCCCeEEEEeCCCC
Q 015768 105 IVLTLC--DAGDSVVMFAPYYFNSY-MSFQMTGVTHIL---VGPCSSKT---LHPDADWLEKTLETKPTPKLVSVVNPGN 175 (400)
Q Consensus 105 ~~~~l~--~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~---~~~~~~~~---~~~~~e~l~~~l~~~~~~~~v~l~~p~n 175 (400)
++.++. .+||.|++.+|+|++.. ..++..|...+. + |...+. ...|++++++.+++++ ++|++++++|
T Consensus 120 al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~-p~~~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~~~~ 196 (395)
T 1vef_A 120 ALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFL-PLVEPVEFIPYNDVEALKRAVDEET--AAVILEPVQG 196 (395)
T ss_dssp HHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGC-SCSSCEEEECTTCHHHHHHHCCTTE--EEEEECSEET
T ss_pred HHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccC-CCCCCeeEeCCCcHHHHHHHhccCE--EEEEEeCccC
Confidence 998874 57899999999997654 456656654210 1 211110 0138999999997544 8887766688
Q ss_pred CCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccCCCcEEEEeccccccCCCcceeEEEEccCCcHH
Q 015768 176 PSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEG 252 (400)
Q Consensus 176 ptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~ 252 (400)
|||.+ .+.+++++|.++|++||+++|+||+|+++...+.... ......+++ |+||+++ +|+|+||++.+ ++
T Consensus 197 ~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~g~~~G~~~~~---~~ 270 (395)
T 1vef_A 197 EGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALG-GGVPLGVAVMR---EE 270 (395)
T ss_dssp TTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG-TTSSCEEEEEE---HH
T ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEccccc-CCCceEEEEeh---HH
Confidence 99976 4788899999999999999999999996544332211 111122333 8899998 58999999998 66
Q ss_pred HHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCCCC
Q 015768 253 FATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKHL 331 (400)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~ 331 (400)
+++.+.......+++++++.+.++..+++...+ .+..++++++++++.+.|++++...+ ..+..++++|+.++.
T Consensus 271 ~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~--- 345 (395)
T 1vef_A 271 VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER--TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKE--- 345 (395)
T ss_dssp HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESS---
T ss_pred HHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcC---
Confidence 766665433345667888888888888874221 34677788889999999988764111 112236788888874
Q ss_pred CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 332 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+..++..+|.+++||.+.++ .++++||+++. .+++++++++++|++++
T Consensus 346 ~~~~l~~~l~~~~gi~v~~~----~~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 346 KAAPYIARLEKEHRVLALQA----GPTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp CSHHHHHHHHHHHCEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCeEEecC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 35678887764789999985 36899999875 79999999999999875
No 141
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=5.4e-33 Score=267.14 Aligned_cols=347 Identities=12% Similarity=0.055 Sum_probs=239.8
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. +.++ .+|++++++.+.+.+... ....+..+.+.++++++.+.++.+.+ +++|+|+++|++
T Consensus 46 ~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~ 121 (452)
T 3n5m_A 46 IQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANE 121 (452)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHH
Confidence 4568899999884 4454 589999999999876422 22345567888888888888776656 999999999999
Q ss_pred HHHHHhc-----C---CCCEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCC-CCC-CC---------
Q 015768 104 NIVLTLC-----D---AGDSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSK-TLH-PD--------- 151 (400)
Q Consensus 104 ~~~~~l~-----~---~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~-~~~-~~--------- 151 (400)
.+++++. . ++++|++.+|+|++........+. ....+ +.... ... -+
T Consensus 122 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (452)
T 3n5m_A 122 TAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHV-TPPDCYRMPGIERENIYDVEC 200 (452)
T ss_dssp HHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEE-CCCCTTTSTTTTTSCGGGCHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEe-CCCccccCccCCchhhHHHHH
Confidence 9999987 5 789999999999987755444332 12233 22110 000 02
Q ss_pred HHHHHHhhc-c-CCCCeEEEEeCC-CCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 152 ADWLEKTLE-T-KPTPKLVSVVNP-GNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 152 ~e~l~~~l~-~-~~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
+++|++.++ . ...+++|+++.+ +| +|.+. +.+++++|.++|++||+++|+||+|.++...+........+....+
T Consensus 201 ~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di 279 (452)
T 3n5m_A 201 VKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDI 279 (452)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSE
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCE
Confidence 889999887 1 122477777777 89 99755 8888999999999999999999999987655543222222222224
Q ss_pred eccccccCCCc-ceeEEEEccCCcHHHHHHHHH------hhccCCcCccHHHHHHHHHHhcCCc--HHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK------VQDNIPICASIISQHLALYSLQTGP--EWVTERVKDLVRNR 298 (400)
Q Consensus 228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~ 298 (400)
.++||.++ +| +|+||++.+ +++++.+.. .....+++.+++++.++.++|+... +..++..+.....+
T Consensus 280 ~t~sK~l~-~G~~~ig~~~~~---~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 355 (452)
T 3n5m_A 280 ITMAKGIT-SAYLPLSATAVK---REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLL 355 (452)
T ss_dssp EEECGGGG-TTSSCCEEEEEE---HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred Eeeccccc-CCCcceEEEEEC---HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 47899998 59 999999998 788877742 1234678889999999999887421 22333333333334
Q ss_pred HHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC--------HHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEecc-C
Q 015768 299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD--------DFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-L 367 (400)
Q Consensus 299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~-~ 367 (400)
+.+.+.+++++.+....+. +.++++.+.....+ ..+++..++ ++||.+.|+..|. .++++||+++. .
T Consensus 356 ~~L~~~~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~~~~~iRi~~~~~~ 433 (452)
T 3n5m_A 356 EQLKEEIGEHPLVGDIRGK-GLLVGIELVNDKETKEPIDNDKIASVVNACK-EKGLIIGRNGMTTAGYNNILTLAPPLVI 433 (452)
T ss_dssp HHHHHHHTTCTTEEEEEES-SSCEEEEEEEETTTTEECCHHHHHHHHHHHH-HTTEECEECTTSSTTCCCEEEECCCTTC
T ss_pred HHHHHHHhcCCCeEEEEEE-EEEEEEEEecCCcccCCCCHHHHHHHHHHHH-HCCcEEeecCcccCCCCCEEEEECCCCC
Confidence 4444444455554444455 55555555321100 245677665 7899999987653 36899998776 7
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 015768 368 VEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~ 385 (400)
+++++++++++|++++++
T Consensus 434 t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 434 SSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 142
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=1.1e-32 Score=263.25 Aligned_cols=332 Identities=10% Similarity=0.065 Sum_probs=233.1
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+|+.++||..|. ++++ .+|++++++.+.+.+... ++. ....+.+.++++.+.+..+ .+++++++|+++|++.
T Consensus 63 ~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~ 137 (433)
T 1z7d_A 63 NDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI--CSR-AFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANET 137 (433)
T ss_dssp TCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSC--CCT-TSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHH
T ss_pred CCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCC--ccC-CcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHH
Confidence 467789998865 4666 899999999999876421 211 1234555666666666656 5899999999999999
Q ss_pred HHHHhc---------CCC-CEEEEeCCCccchhH-HHHhcC------------cEEEEeccCCCCCCCCCHHHHHHhhc-
Q 015768 105 IVLTLC---------DAG-DSVVMFAPYYFNSYM-SFQMTG------------VTHILVGPCSSKTLHPDADWLEKTLE- 160 (400)
Q Consensus 105 ~~~~l~---------~~g-d~vlv~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~e~l~~~l~- 160 (400)
++.++. .+| |+|++++|+|++... .+...| ..++.+ |. .|++.+++.++
T Consensus 138 al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~-~~------~d~~~le~~l~~ 210 (433)
T 1z7d_A 138 AYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKV-PY------DDLEALEEELKD 210 (433)
T ss_dssp HHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEE-CT------TCHHHHHHHHTS
T ss_pred HHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEe-CC------CCHHHHHHHhCC
Confidence 999864 367 999999999988653 333333 233444 33 28999999995
Q ss_pred cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCCC
Q 015768 161 TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGMM 237 (400)
Q Consensus 161 ~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~~ 237 (400)
++ +++|+++..+|++|.+ ++.+++++|.++|++||+++|+||+|.++...+...... ....+++ |+||.+| +
T Consensus 211 ~~--~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~-~ 285 (433)
T 1z7d_A 211 PN--VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALS-G 285 (433)
T ss_dssp TT--EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-T
T ss_pred CC--EEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECcccc-C
Confidence 33 4777666556788975 688899999999999999999999998765544322111 1122333 8899998 8
Q ss_pred c-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCc
Q 015768 238 G-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGA 312 (400)
Q Consensus 238 g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~ 312 (400)
| +|+||++++ +++++.+.......+++.+++++.++.++|+...+ .+..++++++++++++.|+++ +.+.
T Consensus 286 G~~~~G~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 360 (433)
T 1z7d_A 286 GHYPISAVLAN---DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN--EKLCENAEKLGGPFLENLKRELKDSKIVR 360 (433)
T ss_dssp TSSCCEEEEEC---HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred CCCCeEEEEEC---HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 8 899999998 77777665544556788899999888888874221 245566777777777777654 2212
Q ss_pred ccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 313 VKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
...+. +.++++.++....+..++...|. ++||.+.|+ .++++|++++. .+++++++++++|+++++++.
T Consensus 361 ~~~~~-g~~~~i~~~~~~~~~~~~~~~l~-~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 361 DVRGK-GLLCAIEFKNELVNVLDICLKLK-ENGLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp EEEEE-TTEEEEEECTTTCCHHHHHHHHH-HTTEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEee-eeEEEEEEccChhHHHHHHHHHH-HCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 23333 67788888753124678888886 689999885 36899999876 799999999999999998764
No 143
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=2.4e-32 Score=258.29 Aligned_cols=319 Identities=19% Similarity=0.179 Sum_probs=223.3
Q ss_pred EEcCCCCCCCCCcHHHHHHHHHhhc---CCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 33 VSLAQGVVYWQPPKMAMEKVKELVW---DPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 33 i~~~~~~~~~~~~~~v~~a~~~~~~---~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
..++.+++++..++.+.+++.+++. ++ ...|....+..+..+++++++++.+|.+ +.++++++++|+..++.++
T Consensus 23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~ 99 (398)
T 2rfv_A 23 STGALSTPIFQTSTFVFDSAEQGAARFALE-ESGYIYTRLGNPTTDALEKKLAVLERGE--AGLATASGISAITTTLLTL 99 (398)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHC------CCSBTTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCC-CCCCceeCCCChHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHH
Confidence 3577788888666555554444433 21 2223333333455556666666666764 6667777789999999999
Q ss_pred cCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
.++||+|+++.|+|+++...+ +..|.+++.+ |.+ |++++++.+++++ ++|++++|+||||.+++
T Consensus 100 ~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~------d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~--- 167 (398)
T 2rfv_A 100 CQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFV-DAA------KPEEIRAAMRPET--KVVYIETPANPTLSLVD--- 167 (398)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEE-CTT------SHHHHHHHCCTTE--EEEEEESSBTTTTBCCC---
T ss_pred hCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEe-CCC------CHHHHHHhcCCCC--eEEEEECCCCCCCcccC---
Confidence 999999999999999988776 7789999988 653 7899999998654 99999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee-EEEEccCCcHHHHH-HHHHhhcc
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDN 263 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~-~l~~~~~~ 263 (400)
+++|.++|++||+++|+|++|+.+.+.. + ...+.++++.|+||+++.+|.|+ ||++.+ +++++ .+......
T Consensus 168 l~~i~~l~~~~~~~li~De~~~~~~~~~-~---~~~~~di~~~s~sK~~~~~g~~~~G~~~~~---~~~~~~~~~~~~~~ 240 (398)
T 2rfv_A 168 IETVAGIAHQQGALLVVDNTFMSPYCQQ-P---LQLGADIVVHSVTKYINGHGDVIGGIIVGK---QEFIDQARFVGLKD 240 (398)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTCTTTCC-G---GGGTCSEEEEETTTTTTCSSCCCCEEEEEC---HHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCC-c---hhhCCcEEEEeCcccccCCCCceEEEEEEC---HHHHHHHHHHHHHh
Confidence 9999999999999999999999766532 1 12357799999999998789998 999998 66665 56655544
Q ss_pred C-CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC--------------CCcccCC---CCceEEEee
Q 015768 264 I-PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG--------------EGAVKGG---EGAIYLWAR 325 (400)
Q Consensus 264 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~~~---~~~~~~~~~ 325 (400)
. +.+.+++.+.++..+++.. ..+.++..++.+.+.+.|++.+ .+.+..+ ..+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~ 316 (398)
T 2rfv_A 241 ITGGCMSPFNAWLTLRGVKTL----GIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFE 316 (398)
T ss_dssp TTCCCCCHHHHHHHHHHHTTH----HHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEE
T ss_pred CCCCCCCHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEE
Confidence 4 5678888999988888752 3344455566666666666543 2122222 135666668
Q ss_pred CCCCCCCHHHHHHHHHHh---cCeEEeCCCccC-----------------------CCCeEEEEecc-CCHHHHHHHHHH
Q 015768 326 LPEKHLDDFEVVRWLAHR---HGVVVIPGGACG-----------------------CRGHLRISFGG-LVEDDCKAAADR 378 (400)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~---~gi~v~~g~~~~-----------------------~~~~iRi~~~~-~~~~~~~~~~~~ 378 (400)
++.. ......++++ .|+.+.+|..+. .++.+|||++. .++++++.+.+.
T Consensus 317 ~~~~----~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 392 (398)
T 2rfv_A 317 IAGG----LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHA 392 (398)
T ss_dssp ETTH----HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred EcCC----HHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHH
Confidence 7631 1222333333 378888885431 16899999998 666666655555
Q ss_pred HHH
Q 015768 379 LRR 381 (400)
Q Consensus 379 l~~ 381 (400)
|++
T Consensus 393 l~~ 395 (398)
T 2rfv_A 393 IRK 395 (398)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 144
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=2.6e-32 Score=262.02 Aligned_cols=346 Identities=13% Similarity=0.088 Sum_probs=234.0
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. +.++ .+|++++++.+.+.+.. .|....+..+.+.++++++.+.++...+++++++|+++|++
T Consensus 41 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 118 (448)
T 3dod_A 41 INGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAME 118 (448)
T ss_dssp TTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHH
Confidence 3568899998874 3443 58999999999987642 23234456678889999998888766789999999999999
Q ss_pred HHHHHhcC----CC----CEEEEeCCCccchhHHHHhcCc-------------EEEEeccCCCCCCCC-----------C
Q 015768 104 NIVLTLCD----AG----DSVVMFAPYYFNSYMSFQMTGV-------------THILVGPCSSKTLHP-----------D 151 (400)
Q Consensus 104 ~~~~~l~~----~g----d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~-----------~ 151 (400)
.+++++.. +| |+|++..|+|++........+. .+..+ |.+ +.+.. |
T Consensus 119 ~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~d 196 (448)
T 3dod_A 119 IALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKA-PIP-YVYRSESGDPDECRDQC 196 (448)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEE-CCC-CCTTSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEe-CCC-ccccCCccchhhhhHHH
Confidence 99999875 44 9999999999886644333221 22233 322 11111 3
Q ss_pred HHHHHHhhcc-CCCCeEEEEeCCC-CCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 152 ADWLEKTLET-KPTPKLVSVVNPG-NPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 152 ~e~l~~~l~~-~~~~~~v~l~~p~-nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
+++|++.++. ...+++|+++.++ |++| .+++.+++++|.++|++||+++|+||+|.++...+........+....+.
T Consensus 197 ~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~ 276 (448)
T 3dod_A 197 LRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM 276 (448)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred HHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEE
Confidence 7889988872 1124667776666 8887 46788889999999999999999999999876554332221112222244
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHH-------hhccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHH
Q 015768 229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK-------VQDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNR 298 (400)
Q Consensus 229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~ 298 (400)
++||+++ +| +|+||++.+ +++++.+.. .....+++.+++++.++.++|+.. ++...+..+.....+
T Consensus 277 t~sK~l~-~G~~~ig~v~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~ 352 (448)
T 3dod_A 277 AAGKGIT-GGYLPIAVTFAT---EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLH 352 (448)
T ss_dssp EECGGGG-TTSSCCEEEEEE---HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred Eeccccc-CCcCceEEEEEC---HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 7889997 68 599999998 788888765 444567888999999999998742 122333334444444
Q ss_pred HHHHHHhccCCCCcccCCCCceEEEeeCCCCCCC----------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768 299 EIIREALSPLGEGAVKGGEGAIYLWARLPEKHLD----------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 367 (400)
Q Consensus 299 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~ 367 (400)
+.+.+ +..++.+....+. +.++++.++....+ ..+++..++ ++||.+.|+ .+++||+++. .
T Consensus 353 ~~l~~-l~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----~~~iRi~~~~~~ 424 (448)
T 3dod_A 353 FLLQD-LHALPHVGDIRQL-GFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL-----GDVIAFLPPLAS 424 (448)
T ss_dssp HHHHH-HTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE-----TTEEEECCCTTC
T ss_pred HHHHH-HhcCCCeEEEEee-eEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc-----CCEEEEECCCCC
Confidence 55555 5555543333344 66777777643211 367788776 789999885 3899998765 7
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015768 368 VEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+++++++++++|+++++++..
T Consensus 425 t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 425 TAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999988753
No 145
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=100.00 E-value=7e-31 Score=250.39 Aligned_cols=331 Identities=17% Similarity=0.141 Sum_probs=242.8
Q ss_pred cCCCeE--EcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAV--SLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i--~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+|.+.+ +|+.+.+++++|+++++++.+.+..+ .|+. ..+..++++++++++ +. +++++|+|+++++..
T Consensus 12 gg~~~~~~~l~~~~p~~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~----~~--~~v~~~~ggt~al~~ 82 (424)
T 2po3_A 12 GGPAAFDQPLLVGRPNRIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLA----GV--RHAVATCNATAGLQL 82 (424)
T ss_dssp TCCCSCSSCEETTCCCCCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHH----TS--SEEEEESCHHHHHHH
T ss_pred cCCccccccccccCCCCCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHh----CC--CeEEEeCCHHHHHHH
Confidence 344444 68889999988999999998888653 3765 577888999999988 43 689999999999999
Q ss_pred HHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 105 IVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 105 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
++.++. +||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++ ++|+++ ||+|...+
T Consensus 83 ~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~---~~tG~~~~-- 153 (424)
T 2po3_A 83 LAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFA-DIDPDTGNLDPDQVAAAVTPRT--SAVVGV---HLWGRPCA-- 153 (424)
T ss_dssp HHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTSSBCHHHHGGGCCTTE--EEEEEE---CGGGCCCC--
T ss_pred HHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEE-ecCCCcCCcCHHHHHHhhCcCC--cEEEEE---CCCCCcCC--
Confidence 999986 78999999999999999999999999999 8887677889999999987654 888875 48999888
Q ss_pred HHHHHHHHHHHcCCEEEEccccc-ccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYE-YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
+++|.++|+++|+++|+|++|+ ++.+.+..... .. +++++|+||..+++|.|+||++.++ +++++++......
T Consensus 154 -l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~-~~--di~~~S~sk~K~l~~~~~G~~v~~~--~~l~~~l~~~~~~ 227 (424)
T 2po3_A 154 -ADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGS-LG--DAEVFSFHATKAVNAFEGGAVVTDD--ADLAARIRALHNF 227 (424)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS-SS--SEEEEECCTTSSSCCSSCEEEEESC--HHHHHHHHHHHBT
T ss_pred -HHHHHHHHHHcCCEEEEECccccCCeECCeeccc-cc--CEEEEeCCCCCCccCCCCeEEEeCC--HHHHHHHHHHHhc
Confidence 8999999999999999999999 45554432211 12 3888999844444568999999885 6777777665432
Q ss_pred CC------------cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-CCCc----eEEEeeC
Q 015768 264 IP------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-GEGA----IYLWARL 326 (400)
Q Consensus 264 ~~------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~----~~~~~~~ 326 (400)
.. +..+.+...++... .++++++.++..++++++.+.|++++++.+.. +.++ .++++.+
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~ 303 (424)
T 2po3_A 228 GFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEI 303 (424)
T ss_dssp TTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEE
T ss_pred CccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEE
Confidence 11 11223322222222 24466777788888899999999876545554 3322 3344666
Q ss_pred CCC--CCCHHHHHHHHHHhcCeEEeCCCccC--------------CCC-------eEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 327 PEK--HLDDFEVVRWLAHRHGVVVIPGGACG--------------CRG-------HLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 327 ~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~--------------~~~-------~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
+.. ..+..++...| .++||.+.+..... .++ .+|+++.. ++++|+++++++|+++
T Consensus 304 ~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~ 382 (424)
T 2po3_A 304 DEATTGIHRDLVMEVL-KAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLC 382 (424)
T ss_dssp CHHHHSSCHHHHHHHH-HHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHH
T ss_pred CCccchhhHHHHHHHH-HHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence 530 13577888866 47999998732100 011 27776545 8999999999999999
Q ss_pred HHHHh
Q 015768 383 LEELV 387 (400)
Q Consensus 383 l~~~~ 387 (400)
+++..
T Consensus 383 ~~~~~ 387 (424)
T 2po3_A 383 ATRGR 387 (424)
T ss_dssp HHHHH
T ss_pred HhhhH
Confidence 87654
No 146
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=1.1e-31 Score=256.61 Aligned_cols=329 Identities=13% Similarity=0.131 Sum_probs=238.8
Q ss_pred cCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCC--CCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 28 GAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSIS--KYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 28 ~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
+|+.++||..|.. +++ .+|++++++.+.+.+.... .| +.....++++.+++++ | .+++++++|+++|+
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g--~~~v~~~~sGseA~ 146 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF----N--YHKVLPMNTGVEAG 146 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH----T--CSEEEEESSHHHHH
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc----C--CCEEEEeCCHHHHH
Confidence 4677999988764 555 8999999999998764211 12 2233445555555544 5 58999999999999
Q ss_pred HHHHHHhc---------CCC-CEEEEeCCCccchhH-HHHhcC------------cEEEEeccCCCCCCCCCHHHHHHhh
Q 015768 103 VNIVLTLC---------DAG-DSVVMFAPYYFNSYM-SFQMTG------------VTHILVGPCSSKTLHPDADWLEKTL 159 (400)
Q Consensus 103 ~~~~~~l~---------~~g-d~vlv~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~e~l~~~l 159 (400)
+.++.++. .+| |.|++.+|+|++... .+...| ..++.+ |. .|++++++.+
T Consensus 147 ~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~-~~------~d~~~le~~l 219 (439)
T 2oat_A 147 ETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDII-PY------NDLPALERAL 219 (439)
T ss_dssp HHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEE-CS------SCHHHHHHHT
T ss_pred HHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEe-CC------CCHHHHHHHh
Confidence 99999875 357 899999999988654 444334 345555 43 2799999999
Q ss_pred ccCCCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEeccccccCC
Q 015768 160 ETKPTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAYGM 236 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~g~ 236 (400)
+.. .+++|+++..++++|. +++.+++++|.++|++||+++|+||+|.++...+...... ....+++ |+||++|
T Consensus 220 ~~~-~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~- 295 (439)
T 2oat_A 220 QDP-NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALS- 295 (439)
T ss_dssp TST-TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG-
T ss_pred CCC-CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--Eeccccc-
Confidence 522 2467666655678896 5688899999999999999999999998765544322111 1122333 8899998
Q ss_pred Cc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCc--c
Q 015768 237 MG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGA--V 313 (400)
Q Consensus 237 ~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~--~ 313 (400)
+| +|+||++++ +++++.+.......+++.+++.+.++.++|+...+ .+..++++++++++++.|++++... .
T Consensus 296 ~G~~~~G~v~~~---~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 370 (439)
T 2oat_A 296 GGLYPVSAVLCD---DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE--ENLAENADKLGIILRNELMKLPSDVVTA 370 (439)
T ss_dssp TTSSCCEEEEEC---HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHTTSCTTTEEE
T ss_pred CCCCCeEEEEEC---HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 68 899999998 77777665544556788899999988888874221 2466778888999999998874311 1
Q ss_pred cCCCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 314 KGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 314 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
..+ .+.++++.++... .+..++...|. ++||.+.|+ .++++|++++. .+++++++++++|++++++
T Consensus 371 ~~~-~g~~~~v~l~~~~~~~~~~l~~~l~-~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 371 VRG-KGLLNAIVIKETKDWDAWKVCLRLR-DNGLLAKPT----HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp EEE-ETTEEEEEECCCSSCCHHHHHHHHH-HTTEECCBS----SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEe-eeeEEEEEEecCccHHHHHHHHHHH-HCCeEEecC----CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 223 3677888886531 24678888886 689999884 36899998875 7999999999999998864
No 147
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=3.7e-31 Score=251.69 Aligned_cols=358 Identities=12% Similarity=0.076 Sum_probs=247.9
Q ss_pred HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCC------CCCCCcHHHHHHHHHHHHh
Q 015768 10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKY------GADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y------~~~~g~~~~~~~~a~~l~~ 83 (400)
++.......+..+.+......+.+.|..+.+.. ++++++++.+.+.+.....| +.......+++.+.+++++
T Consensus 5 ~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 82 (417)
T 3n0l_A 5 SLEMFDKEIFDLTNKELERQCEGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKK 82 (417)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHH
T ss_pred chhhcCHHHHHHHHHHHHHHhcCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHH
Confidence 344445555666655544445778887766554 79999999888844221222 2223335666666777777
Q ss_pred hcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH---HHHh--cCcEEEEeccCCCCCCCCCHHHHHHh
Q 015768 84 ENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM---SFQM--TGVTHILVGPCSSKTLHPDADWLEKT 158 (400)
Q Consensus 84 ~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~--~g~~~~~~~~~~~~~~~~~~e~l~~~ 158 (400)
.+|.++++|++++| ++|+..++.++.++||+|+++.|+|+++.. .+.. .++.++.+ +.+ +++.+|++++++.
T Consensus 83 ~~g~~~~~i~~~sG-t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~~~d~~~l~~~ 159 (417)
T 3n0l_A 83 LFNCKFANVQPNSG-SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFY-GVE-LDGRIDYEKVREI 159 (417)
T ss_dssp HHTCSEEECCCSSH-HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEE-CCC-TTSSCCHHHHHHH
T ss_pred HhCCCCcceEeccH-HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEec-cCC-CCCCcCHHHHHHH
Confidence 77887777877776 799999999999999999999999987654 3333 34566777 776 5567899999999
Q ss_pred hc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-cccCCCCccccCCCcEEEEeccccccCC
Q 015768 159 LE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM 236 (400)
Q Consensus 159 l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 236 (400)
++ .++ ++|++++++| |.+.+ +++|.++|++||+++|+|++++. ..+.+...... ...+++++|+||++
T Consensus 160 i~~~~~--~~v~~~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~-~~~di~~~s~sK~l-- 229 (417)
T 3n0l_A 160 AKKEKP--KLIVCGASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPF-PYAHVVSSTTHKTL-- 229 (417)
T ss_dssp HHHHCC--SEEEECCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCT-TTCSEEEEESSTTT--
T ss_pred HHhcCC--eEEEECCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCcc-ccceEEEeeCcccc--
Confidence 98 455 8998887776 88899 89999999999999999999753 33333222111 24568999999988
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCC-cCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 237 MGWRVGYIAYPSEVEGFATQLLKVQDNIP-ICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
+|+|+||+++++ +++.+.+........ .+++...+.++..++.. ..+++.++.+++.++++++.+.|++.+. .+.
T Consensus 230 ~g~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~ 306 (417)
T 3n0l_A 230 RGPRGGIIMTND--EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKF-KLV 306 (417)
T ss_dssp CSCSCEEEEESC--HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEG
T ss_pred CCCCeeEEEECC--HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCc-eec
Confidence 577889999885 678888776654332 23455555555555543 3355678888899999999999988554 443
Q ss_pred C-CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC------CCCeEEEEecc-----CCHHHHHHHHHHHHHH
Q 015768 315 G-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG------CRGHLRISFGG-----LVEDDCKAAADRLRRG 382 (400)
Q Consensus 315 ~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~------~~~~iRi~~~~-----~~~~~~~~~~~~l~~~ 382 (400)
. +..++++|+.++....+...+...| +++||.+.++..+. .++.+|+++.. .+++++++++++|+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~ 385 (417)
T 3n0l_A 307 SDGTDNHLVLMSFLDREFSGKDADLAL-GNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADI 385 (417)
T ss_dssp GGSCSSSEEEEECTTSSSCHHHHHHHH-HHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCceEEEEEcccCCCCHHHHHHHH-HHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHH
Confidence 3 3346788888865444666777655 58999998654332 24679999763 4689999999999999
Q ss_pred HHHH
Q 015768 383 LEEL 386 (400)
Q Consensus 383 l~~~ 386 (400)
+++.
T Consensus 386 l~~~ 389 (417)
T 3n0l_A 386 LDDV 389 (417)
T ss_dssp HHTT
T ss_pred Hhcc
Confidence 9764
No 148
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=100.00 E-value=1.1e-30 Score=248.68 Aligned_cols=328 Identities=14% Similarity=0.123 Sum_probs=237.9
Q ss_pred CCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCC
Q 015768 37 QGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGD 114 (400)
Q Consensus 37 ~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd 114 (400)
.|.+.++ .++++++++.+.+.+.....|++..|..++++++++.+++.+|.+ ++++++++|+|+..++.++ .++||
T Consensus 6 ~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~~i~~~~gt~al~~~~~~~~~~~gd 83 (418)
T 2c81_A 6 DHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP--YCVPTTSGSTALMLALEALGIGEGD 83 (418)
T ss_dssp --CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHcCCCCcC
Confidence 4556664 479999999998876544447666776666777777777776865 6777888899999999999 89999
Q ss_pred EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015768 115 SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194 (400)
Q Consensus 115 ~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~ 194 (400)
+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++ ++|+++ ||+|...+ +++|.++|+
T Consensus 84 ~Vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~---~~~G~~~~---~~~i~~~~~ 154 (418)
T 2c81_A 84 EVIVPSLTWIATATAVLNVNALPVFV-DVEADTYCIDPQLIKSAITDKT--KAIIPV---HLFGSMAN---MDEINEIAQ 154 (418)
T ss_dssp EEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHGGGCCTTE--EEECCB---CCTTCCCC---HHHHHHHHH
T ss_pred EEEECCCccHhHHHHHHHcCCEEEEE-ecCCCCCCcCHHHHHHhhCCCC--eEEEEe---CCcCCccc---HHHHHHHHH
Confidence 99999999999999999999999999 8876567889999999997654 888754 68999888 899999999
Q ss_pred HcCCEEEEcccccccc-cCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC------
Q 015768 195 AAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP------ 265 (400)
Q Consensus 195 ~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~------ 265 (400)
+||+++|+|++|+.+. +++..... .. ++++.|+ ||++|. | ++||++.++ +++++++........
T Consensus 155 ~~~~~li~D~a~~~~~~~~~~~~~~-~~--~~~~~s~s~~K~~~~-g-~~g~~~~~~--~~l~~~~~~~~~~~~~~~~~~ 227 (418)
T 2c81_A 155 EHNLFVIEDCAQSHGSVWNNQRAGT-IG--DIGAFSCQQGKVLTA-G-EGGIIVTKN--PRLFELIQQLRADSRVYCDDS 227 (418)
T ss_dssp HTTCEEEEECTTCTTCEETTEETTS-SS--SEEEEECCTTSSSCS-S-SCEEEEESC--HHHHHHHHHHHBTTEEECSCG
T ss_pred HCCCEEEEECcccccCccCCEeccc-cc--ceEEEeccCCcccCC-C-CeEEEEECC--HHHHHHHHHHHHhCccccccc
Confidence 9999999999999876 44322211 12 3666666 999985 7 999999864 677777765433211
Q ss_pred ------cC--------------ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCC-ce---
Q 015768 266 ------IC--------------ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG-AI--- 320 (400)
Q Consensus 266 ------~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~-~~--- 320 (400)
+. .+.+........++ ++++..++.+++++++.+.|++++++.+. .+.+ +.
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 303 (418)
T 2c81_A 228 SELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ----ELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTY 303 (418)
T ss_dssp GGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCC
T ss_pred cccccchhhccccccccCcCCCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCccccc
Confidence 11 11111111112222 25667777788889999999988665555 3443 22
Q ss_pred -EEEeeCCC---CCCCHHHHHHHHHHhcCeE---EeCCCccC---------------------------C---------C
Q 015768 321 -YLWARLPE---KHLDDFEVVRWLAHRHGVV---VIPGGACG---------------------------C---------R 357 (400)
Q Consensus 321 -~~~~~~~~---~~~~~~~~~~~l~~~~gi~---v~~g~~~~---------------------------~---------~ 357 (400)
.+.+.++. ...+..++...|.+++||. +.++..+. . .
T Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (418)
T 2c81_A 304 YGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASG 383 (418)
T ss_dssp SEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHH
T ss_pred EEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHh
Confidence 23366653 1236788998887444999 88775220 0 1
Q ss_pred CeEEEEecc-C-CHHHHHHHHHHHHHHHHHH
Q 015768 358 GHLRISFGG-L-VEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 358 ~~iRi~~~~-~-~~~~~~~~~~~l~~~l~~~ 386 (400)
+.+||+++. + |++|++.+++.|+++++++
T Consensus 384 ~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 384 QSIVIHHAILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp HEEEEEGGGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCCccCCCHHHHHHHHHHHHHHHHhh
Confidence 489999987 8 9999999999999988754
No 149
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-31 Score=258.18 Aligned_cols=329 Identities=11% Similarity=0.013 Sum_probs=248.9
Q ss_pred CCcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcC-----C
Q 015768 43 QPPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD-----A 112 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~-----~ 112 (400)
..++.+.+++.+.+... ....|...++..++++++++++++.+|++ ++++++++|+++++..++.++++ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 34567777777666542 12334445667789999999999999987 78999999999999999999864 5
Q ss_pred C---CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 113 G---DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 113 g---d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
| |+|+++.++|+++...++..|++++.+ |.+++++.+|+++|++.+++++ ++|++++|+||+|.+.+ +++|
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~p~nptG~~~~---l~~i 228 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHV-ELDPTTYQVDLGKVKKFINKNT--VLLVGSAPNFPHGIADD---IEGL 228 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEE-CBCTTTCSBCTTTTGGGCCSSE--EEEEEETTCTTTCCCCS---CTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEE-ecCcccCcCCHHHHHHHHhhCC--EEEEEECCCCCCCcCCC---HHHH
Confidence 6 899999999999999999999999999 8877556789999999998765 99999999999999999 8899
Q ss_pred HHHHHHcCCEEEEcccccccccC-----C---C-CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHh
Q 015768 190 SDLCKAAGSWLVVDNTYEYFMYD-----G---R-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~~~~-----~---~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
.++|++||+++|+|++|+.+... + . +......+.++++.|++|+++ +|.++|+++.++ +........
T Consensus 229 ~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~---~~~~~~~~~ 304 (497)
T 3mc6_A 229 GKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGF-APKGSSVIMYRN---SDLRMHQYY 304 (497)
T ss_dssp TTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTC-CCSSCEEEECSS---HHHHTTTSC
T ss_pred HHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcC-CCCCceeEEecC---HHHHhhhhc
Confidence 99999999999999999865431 1 1 122233456788999999874 678899999884 333222111
Q ss_pred hc-c---CC-------cCcc---HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCCCceEEEee
Q 015768 261 QD-N---IP-------ICAS---IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP-LGEGAVKGGEGAIYLWAR 325 (400)
Q Consensus 261 ~~-~---~~-------~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~ 325 (400)
.. . .. .+.+ ..+++++...+. .+++.++.++..++++++++.|++ ++++.+..+..+.++++.
T Consensus 305 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~ 382 (497)
T 3mc6_A 305 VNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG--ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFS 382 (497)
T ss_dssp CBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEE
T ss_pred ccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEe
Confidence 00 0 00 0111 344555555554 355678888999999999999999 566666644445566666
Q ss_pred CCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 326 LPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 326 ~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
.+. .+..++...|. ++||.+.++. .+..+|+++...+++++++++++|+++++++.+.
T Consensus 383 ~~~--~~~~~l~~~L~-~~Gi~v~~~~---~~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 383 SKT--LNIHELSDRLS-KKGWHFNALQ---KPVALHMAFTRLSAHVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp CTT--TTHHHHHHHHH-TTTCBCEECC---SSCCEEEECCTTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred CCC--CCHHHHHHHHH-hCCEEEecCC---CCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 543 36788888886 7899987654 3557899988778999999999999999987653
No 150
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=100.00 E-value=2.8e-32 Score=261.75 Aligned_cols=341 Identities=10% Similarity=-0.017 Sum_probs=243.9
Q ss_pred cCC--CeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 28 GAK--NAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 28 ~~~--~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
+|+ .++||..+. +.++ .+|++++++.+.+.+... +.......+...++++++.+.++...+++++++|+++|+
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~ 148 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNH--VMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSV 148 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSC--CCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHH
Confidence 678 899998874 5555 689999999998875321 111222345666777777777777778999999999999
Q ss_pred HHHHHHhcC-------CC-CEEEEeCCCccchhHHHHhcC--------------cEEEEeccCCCCCC-CCCHHHHHHhh
Q 015768 103 VNIVLTLCD-------AG-DSVVMFAPYYFNSYMSFQMTG--------------VTHILVGPCSSKTL-HPDADWLEKTL 159 (400)
Q Consensus 103 ~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~-~~~~e~l~~~l 159 (400)
+.+++++.. +| +.|++.+++|++........+ ..+..+ |.+..++ ..|+++|++.+
T Consensus 149 ~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~d~~~le~~l 227 (457)
T 3tfu_A 149 EVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFA-PQVPRDYDPAYSAAFEAQL 227 (457)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEE-CCCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEe-cCCCcccCHHHHHHHHHHH
Confidence 999998875 55 589999999988765544431 122223 3322221 13788999988
Q ss_pred ccC-CCCeEEEEeC-CCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEEEecccccc
Q 015768 160 ETK-PTPKLVSVVN-PGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVNLFSFSKAY 234 (400)
Q Consensus 160 ~~~-~~~~~v~l~~-p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~ 234 (400)
+.. ..+++|+++. ++|++|.+. +.+++++|.++|++||+++|+||+|.++...+...... ....+++ |+||++
T Consensus 228 ~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l 305 (457)
T 3tfu_A 228 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKAL 305 (457)
T ss_dssp HHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG
T ss_pred HhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhh
Confidence 721 1247788877 789999765 78889999999999999999999999876554322111 1122233 889999
Q ss_pred CCCc-ceeEEEEccCCcHHHHHHHHHh-----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768 235 GMMG-WRVGYIAYPSEVEGFATQLLKV-----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 308 (400)
Q Consensus 235 g~~g-~~~G~i~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (400)
+ +| +|+||++.+ +++++.+... ....+++.+++++.++.++|+...+ +.+.++++++.+++++.|+++
T Consensus 306 ~-gG~~~lG~v~~~---~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~--~~~~~~~~~~~~~l~~~L~~l 379 (457)
T 3tfu_A 306 T-GGYLSLAATLCT---ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG--QDWRTRITELAAGLTAGLDTA 379 (457)
T ss_dssp G-TTSSCCEEEEEE---HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHGGG
T ss_pred h-CCCcceEEEEEc---HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHH
Confidence 7 55 699999999 7888888522 3446788899999999988873111 244556667777777777764
Q ss_pred ---CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 309 ---GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 309 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
+.+....+. ++++++.++... +..++...++ ++||.+.|. .+++||+++. .+++++++++++|+++++
T Consensus 380 ~~~~~v~~vr~~-G~~~~i~l~~~~-~~~~~~~~l~-~~Gv~v~~~-----~~~lRi~p~~~~t~eei~~~l~~L~~~l~ 451 (457)
T 3tfu_A 380 RALPAVTDVRVC-GAIGVIECDRPV-DLAVATPAAL-DRGVWLRPF-----RNLVYAMPPYICTPAEITQITSAMVEVAR 451 (457)
T ss_dssp GGSTTEEEEEEC-SSCEEEEESSCC-CHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred hcCCCeeeeecC-CeEEEEEECCcc-cHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 333333344 677778876542 5778888886 679999873 4799999776 799999999999999998
Q ss_pred HHh
Q 015768 385 ELV 387 (400)
Q Consensus 385 ~~~ 387 (400)
++.
T Consensus 452 ~~~ 454 (457)
T 3tfu_A 452 LVG 454 (457)
T ss_dssp HC-
T ss_pred Hhc
Confidence 753
No 151
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=6.9e-32 Score=259.00 Aligned_cols=344 Identities=15% Similarity=0.073 Sum_probs=234.3
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~ 102 (400)
.+|+.++||+.+. +.++ .+|++++++.+.+.+. ..|....+..+.+.++++++.+..+.. .+++++|+|+++|+
T Consensus 58 ~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~ 135 (451)
T 3oks_A 58 VDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAV 135 (451)
T ss_dssp TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHH
T ss_pred CCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHH
Confidence 3467899999873 5554 5899999999998764 234444456678888999988887643 57999999999999
Q ss_pred HHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCc--------------EEEEeccCCC-----------CCC-CCCHHH
Q 015768 103 VNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV--------------THILVGPCSS-----------KTL-HPDADW 154 (400)
Q Consensus 103 ~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~-----------~~~-~~~~e~ 154 (400)
+.+++.+.. .++.|++..++|++........+. .+..+ |... ++. ..+++.
T Consensus 136 ~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~ 214 (451)
T 3oks_A 136 ENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRA-PLSYPFRDAEFGKELATDGELAAKR 214 (451)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEE-CCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEe-CCCccccccccccccchhhHHHHHH
Confidence 999988764 458999999999987765543321 33444 4331 100 012444
Q ss_pred HHHhhc----cCCCCeEEEEeCCCCC-Ccc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 155 LEKTLE----TKPTPKLVSVVNPGNP-SGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 155 l~~~l~----~~~~~~~v~l~~p~np-tG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
+++.+. .++ .+++++.|.|+ +|. ..+.+++++|.++|++||+++|+||+|.++...+........+....+.
T Consensus 215 ~~~~l~~~~~~~~--~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~ 292 (451)
T 3oks_A 215 AITVIDKQIGADN--LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI 292 (451)
T ss_dssp HHHHHHHHTCGGG--EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE
T ss_pred HHHHHHhhcCCCC--EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee
Confidence 444443 222 44444555444 444 4577889999999999999999999999876554322222112222233
Q ss_pred ccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH----H
Q 015768 229 SFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE----A 304 (400)
Q Consensus 229 s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~----~ 304 (400)
|+||.++ +|+|+||++.+ +++++.+.......+++.+++.+.++.++|+...+ .++.++++++.+++++ .
T Consensus 293 t~sK~l~-~G~~iG~v~~~---~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~ 366 (451)
T 3oks_A 293 VTAKGIA-GGLPLSAVTGR---AEIMDSPHVSGLGGTYGGNPIACAAALATIETIES--EGLVARAQQIEKIMKDRLGRL 366 (451)
T ss_dssp EECGGGG-TTSSCEEEEEE---HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHH
T ss_pred eehhhhh-CCcceEEEEEC---HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHH
Confidence 8899998 58999999998 78888777666677889999999999998874211 1333444444444444 4
Q ss_pred hccCCCCcccCCCCceEEEeeCCC------CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768 305 LSPLGEGAVKGGEGAIYLWARLPE------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD 377 (400)
Q Consensus 305 L~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~ 377 (400)
++.++.+....+. +.++++.+.. ......+++..++ ++||.+.|+..+ .+++||+++. .++++++++++
T Consensus 367 ~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~ 442 (451)
T 3oks_A 367 QAEDDRIGDVRGR-GAMIAMELVKAGTTEPDADLTKALCAGAH-AAGVIVLSCGTY--GNVVRFLPPLSIGDDLLNEGLD 442 (451)
T ss_dssp HHHCTTEEEEEEE-TTEEEEEEBSTTSCCBCHHHHHHHHHHHH-HTTEECEEECTT--SCEEEECCCTTCCHHHHHHHHH
T ss_pred HhhCCCeEEEEEe-eEEEEEEEecCccCCCCHHHHHHHHHHHH-hCCcEEecCCCC--CCEEEEECCCCCCHHHHHHHHH
Confidence 4445543344444 6677776632 0012456777665 789999987643 4789999876 79999999999
Q ss_pred HHHHHHHH
Q 015768 378 RLRRGLEE 385 (400)
Q Consensus 378 ~l~~~l~~ 385 (400)
+|++++++
T Consensus 443 ~l~~~l~~ 450 (451)
T 3oks_A 443 VLEEVLRG 450 (451)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 99999864
No 152
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=7.2e-32 Score=258.02 Aligned_cols=341 Identities=11% Similarity=0.057 Sum_probs=226.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. +.++ .+|++++++.+.+.+.....| +. ....++++.+.+.++ .++++++++|++++++
T Consensus 52 ~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~----~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~ 125 (434)
T 3l44_A 52 VDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGT-PT----ALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVM 125 (434)
T ss_dssp TTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSS-CC----HHHHHHHHHHHHHCT-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCC-CC----HHHHHHHHHHHHhCC-CCCEEEEeCchHHHHH
Confidence 4578899998876 4555 689999999998876433333 23 334455555555555 5789999999999999
Q ss_pred HHHHHhcC--CCCEEEEeCCCccchhHHHHhcCc-EEEEe-ccCCCCCC------------CCCHHHHHHhhccC-CCCe
Q 015768 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGV-THILV-GPCSSKTL------------HPDADWLEKTLETK-PTPK 166 (400)
Q Consensus 104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~-~~~~~-~~~~~~~~------------~~~~e~l~~~l~~~-~~~~ 166 (400)
.+++.+.. ++++|++..|+|++........+. ....+ .|.. .+. ..|++++++.++.. ..++
T Consensus 126 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 204 (434)
T 3l44_A 126 TTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDS-AGVPQSIAQEVITVPFNNVETLKEALDKWGHEVA 204 (434)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSS-TTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCc-CCCCCcCCCceEecCcccHHHHHHHHHhCCCCEE
Confidence 99998764 679999999999886654433222 11111 0110 010 01789999988732 1135
Q ss_pred EEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768 167 LVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245 (400)
Q Consensus 167 ~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~ 245 (400)
+|+++.++|++|.+. +.+++++|.++|++||+++|+||+|.+| ..+........+....+.++||.+| +|+|+||++
T Consensus 205 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~ 282 (434)
T 3l44_A 205 AILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPDLTALGKVIG-GGLPIGAYG 282 (434)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCSEEEEEGGGG-TTSSCEEEE
T ss_pred EEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCCeeehhhhhc-CCcCeeeEE
Confidence 555554566667655 8899999999999999999999999987 4332211111111112457899998 899999999
Q ss_pred ccCCcHHHHHHHHH---hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCcccCCCC
Q 015768 246 YPSEVEGFATQLLK---VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEG 318 (400)
Q Consensus 246 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~ 318 (400)
++ +++++.+.. .....+++.+++++.++.++|+...+ ++..++++++.+++++.|++ ++......+.
T Consensus 283 ~~---~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~- 356 (434)
T 3l44_A 283 GK---KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ--EGLYEKLDELGATLEKGILEQAAKHNIDITLNRL- 356 (434)
T ss_dssp EC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEE-
T ss_pred Ec---HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEee-
Confidence 88 788777655 22445788899999999888873111 23344445555555554443 4443334344
Q ss_pred ceEEEeeCCCCCC------------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHL------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 319 ~~~~~~~~~~~~~------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+.++++.+..... ...+++..|+ ++||.+.++. .+.+|+++. .+++++++++++|+++++++
T Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~rl~~~-~t~e~i~~~l~~l~~~l~~~ 430 (434)
T 3l44_A 357 KGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML-QEGVNLAPSK----YEAWFLTTE-HTKEDIEYTIEAVGRAFAAL 430 (434)
T ss_dssp TTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH-HTTEECCSST----TCCEECCTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEecCcccchhhccccCHHHHHHHHHHHH-HCCeEEeecC----CCcEEEecc-cCHHHHHHHHHHHHHHHHHH
Confidence 5666666532111 1256777775 7899999864 457899765 59999999999999999887
Q ss_pred hc
Q 015768 387 VK 388 (400)
Q Consensus 387 ~~ 388 (400)
.+
T Consensus 431 ~~ 432 (434)
T 3l44_A 431 AD 432 (434)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 153
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=2.2e-30 Score=248.87 Aligned_cols=333 Identities=13% Similarity=-0.008 Sum_probs=247.3
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc-----EEEeCChHHHHHHHHHHhcC------
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSS-----VMVTAGANQAFVNIVLTLCD------ 111 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~-----i~~~~g~t~a~~~~~~~l~~------ 111 (400)
+.++.+.+++.+++..+ ...|...++..++++++.+++++.+|++.++ +++|+|+|+|+..++.++..
T Consensus 53 ~~~~~v~e~~~~a~~~~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~ 131 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 131 (452)
T ss_dssp CCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccC-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 45678889998888654 3345555677889999999999999988765 99999999999999988753
Q ss_pred --CC-----CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHH
Q 015768 112 --AG-----DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPER 184 (400)
Q Consensus 112 --~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~ 184 (400)
+| ++|+++. +|..+...++..|++++.+ |.+++++.+|+++|++.+++++ ++|++++|+||||.+.|
T Consensus 132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v-~~~~~~~~~d~~~l~~~i~~~t--~~v~~~~~~n~tG~~~~-- 205 (452)
T 2dgk_A 132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREI-PMRPGQLFMDPKRMIEACDENT--IGVVPTFGVTYTGNYEF-- 205 (452)
T ss_dssp HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEEC-CCBTTBCSCCHHHHHHHCCTTE--EEEECBBSCTTTCBBCC--
T ss_pred HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEE-ecCCCCCeECHHHHHHHHhhCC--EEEEEEcCCcCCcccCC--
Confidence 55 5899999 9999999999999999999 8876456899999999998765 89999999999999999
Q ss_pred HHHHHHHHHHHc------CCEEEEccccccccc---CCC-CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHH
Q 015768 185 LLKRISDLCKAA------GSWLVVDNTYEYFMY---DGR-KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFA 254 (400)
Q Consensus 185 ~l~~i~~l~~~~------~~~li~D~a~~~~~~---~~~-~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~ 254 (400)
+++|.++|+++ |+++++|++|+.+.. ... +......+.+.++.|++|++ ++|.++||++.++ ++..
T Consensus 206 -l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~-~~~~~~G~~~~~~--~~~~ 281 (452)
T 2dgk_A 206 -PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFG-LAPLGCGWVIWRD--EEAL 281 (452)
T ss_dssp -HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTT-CCCSSCEEEEESS--GGGS
T ss_pred -HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECccccc-CCCCCeEEEEEcC--HHHH
Confidence 88899999995 999999999998653 221 11111235677888999965 5788999999875 3322
Q ss_pred -HHHHHhhcc---------CCcCc---cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----C
Q 015768 255 -TQLLKVQDN---------IPICA---SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG----E 317 (400)
Q Consensus 255 -~~l~~~~~~---------~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~ 317 (400)
+.+...... ..++. ..+.++++...+. .+.+.++.+++.++++++.+.|++++.+.+..+ .
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~ 359 (452)
T 2dgk_A 282 PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG--REGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDE 359 (452)
T ss_dssp CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTT
T ss_pred HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCC
Confidence 322110000 01111 3455555555553 355788889999999999999999876565543 2
Q ss_pred CceEEEeeCCCCC---CCHHHHHHHHHHhcCeEEeCCC---ccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 318 GAIYLWARLPEKH---LDDFEVVRWLAHRHGVVVIPGG---ACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 318 ~~~~~~~~~~~~~---~~~~~~~~~l~~~~gi~v~~g~---~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
...++.++++... .+..++...|. ++||.+.... .....+++|++++. +|+++++.+++.|+++++.+.+.
T Consensus 360 ~~~~v~f~~~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~~ 437 (452)
T 2dgk_A 360 GIPAVCFKLKDGEDPGYTLYDLSERLR-LRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDH 437 (452)
T ss_dssp BSSEEEEEECTTCCCSCCHHHHHHHHH-HTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CeEEEEEEecCcccccCCHHHHHHHHH-hcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3566777776421 24578888886 7898653211 11235589999987 78999999999999999887654
No 154
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=100.00 E-value=1.2e-31 Score=258.29 Aligned_cols=344 Identities=13% Similarity=0.038 Sum_probs=240.1
Q ss_pred hcCCCeEEcCCC--CCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQG--VVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~--~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+ .+.++ .+|++++++.+.+.+.. ..|....+..+.+.++++++.+..+...++|++++|+++|++
T Consensus 52 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~ 130 (472)
T 3hmu_A 52 SEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELP-YYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEAND 130 (472)
T ss_dssp TTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCS-CCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHH
Confidence 457889999887 35554 68999999999887632 122222344567778888888877766789999999999999
Q ss_pred HHHHHhcC--------CCCEEEEeCCCccchhHHHHhcCc------------EEEEeccCCC----CCCCCC--------
Q 015768 104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGV------------THILVGPCSS----KTLHPD-------- 151 (400)
Q Consensus 104 ~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~~----~~~~~~-------- 151 (400)
.+++.+.. +++.|++..++|++........+. .+..+ |.+. ..+ .+
T Consensus 131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v-~~p~~~~~~~~-~~~~~~~~~~ 208 (472)
T 3hmu_A 131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHI-NQPNWWAEGGD-MDPEEFGLAR 208 (472)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEE-CCCCHHHHCTT-CCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEe-CCCccccCCcc-cCHHHHHHHH
Confidence 99999874 468999999999987755443332 23334 3221 111 23
Q ss_pred HHHHHHhhcc-C-CCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEEE
Q 015768 152 ADWLEKTLET-K-PTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVVN 226 (400)
Q Consensus 152 ~e~l~~~l~~-~-~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i~ 226 (400)
+++|++.++. . ..+++|+++.+++++|.+ ++.+++++|.++|++||+++|+||+|.+|...+...... .-..+++
T Consensus 209 ~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~ 288 (472)
T 3hmu_A 209 ARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIM 288 (472)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCcee
Confidence 7888888862 1 224666666667788875 488999999999999999999999999876555322111 1112233
Q ss_pred EeccccccCCCcceeEEEEccCCcHHHHHHHHH--hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH-HHHHHHHH
Q 015768 227 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK--VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLV-RNREIIRE 303 (400)
Q Consensus 227 ~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~l~~ 303 (400)
++||+++.+|+|+|+++++ +++++.+.. .....+++.+++++.++.++|+..++ +.+.++++ ++.+++++
T Consensus 289 --t~sK~l~gg~~plG~v~~~---~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~~l~~ 361 (472)
T 3hmu_A 289 --TIAKGLSSGYAPIGGSIVC---DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE--ENILDHVRNVAAPYLKE 361 (472)
T ss_dssp --EECGGGTTTSSCCEEEEEE---HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHTHHHHHHH
T ss_pred --eechhhhcCCcceEEEEEC---HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence 6789997444899999998 888888832 23445788899999999999874211 23445555 55666666
Q ss_pred HhccC---CCCcccCCCCceEEEeeCCCCCC-------C----HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CC
Q 015768 304 ALSPL---GEGAVKGGEGAIYLWARLPEKHL-------D----DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LV 368 (400)
Q Consensus 304 ~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~ 368 (400)
.|+++ +.+..+.+. +.++++.+..... + ..+++..++ ++||.+.++. +++||+++. .+
T Consensus 362 ~L~~l~~~~~v~~vr~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~iRi~p~~~~t 434 (472)
T 3hmu_A 362 KWEALTDHPLVGEAKIV-GMMASIALTPNKASRAKFASEPGTIGYICRERCF-ANNLIMRHVG-----DRMIISPPLVIT 434 (472)
T ss_dssp HHHGGGGSTTEEEEEEE-TTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHH-HTTBCCEEET-----TEEEECCCTTCC
T ss_pred HHHHHhcCCCeEEEEec-CceEEEEEecCccccccccchhHHHHHHHHHHHH-HCCcEEEecC-----CEEEEECCCCCC
Confidence 55543 433344455 5566666543210 0 456777776 7899998853 899999765 79
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 015768 369 EDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 369 ~~~~~~~~~~l~~~l~~~~ 387 (400)
++++++++++|+++++++.
T Consensus 435 ~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 435 PAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765
No 155
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=100.00 E-value=6.6e-31 Score=248.02 Aligned_cols=320 Identities=15% Similarity=0.103 Sum_probs=240.5
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL- 109 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l- 109 (400)
++|+|+. +. .|+++++++.+.+.+.. |.+..+..++++.+++++ +. +++++++|+++|+..++.++
T Consensus 9 ~~i~~~~--p~--~~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~----~~--~~~~~~~~gt~al~~~~~~~~ 75 (393)
T 1mdo_A 9 DFLPFSR--PA--MGAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLT----GN--QYAVAVSSATAGMHIALMALG 75 (393)
T ss_dssp CCBCSCC--CC--CCHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHH----CC--SEEEEESCHHHHHHHHHHHTT
T ss_pred cccccCC--CC--CCHHHHHHHHHHHhcCC---cCCChHHHHHHHHHHHHh----CC--CcEEEecChHHHHHHHHHHcC
Confidence 4678876 33 35788899988886542 334566788888888887 43 48999999999999999999
Q ss_pred cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 110 CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
.++||+|+++.|+|+++...++..|++++.+ |.+++++.+|++.+++.+++++ ++|+++ ||+|.+.+ +++|
T Consensus 76 ~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~l~~~~--~~v~~~---~~~G~~~~---~~~i 146 (393)
T 1mdo_A 76 IGEGDEVITPSMTWVSTLNMIVLLGANPVMV-DVDRDTLMVTPEHIEAAITPQT--KAIIPV---HYAGAPAD---LDAI 146 (393)
T ss_dssp CCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCCBCHHHHHHHCCTTE--EEECCB---CGGGCCCC---HHHH
T ss_pred CCCCCEEEeCCCccHhHHHHHHHCCCEEEEE-eccCCcCCCCHHHHHHhcCCCc--eEEEEe---CCCCCcCC---HHHH
Confidence 8999999999999999999999999999999 8887777889999999997644 888865 48999988 8999
Q ss_pred HHHHHHcCCEEEEccccccc-ccCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccCC-
Q 015768 190 SDLCKAAGSWLVVDNTYEYF-MYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP- 265 (400)
Q Consensus 190 ~~l~~~~~~~li~D~a~~~~-~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~- 265 (400)
.++|+++|+++|+|++|+.+ .+.+.+. .. .++++.|+| |+++ |.++||++.++ +++.+++........
T Consensus 147 ~~l~~~~~~~li~D~a~~~g~~~~~~~~---~~-~d~~~~S~~k~K~l~--~~~~g~~~~~~--~~~~~~l~~~~~~~~~ 218 (393)
T 1mdo_A 147 YALGERYGIPVIEDAAHATGTSYKGRHI---GA-RGTAIFSFHAIKNIT--CAEGGIVVTDN--PQFADKLRSLKFHGLG 218 (393)
T ss_dssp HHHHHHHTCCBCEECTTCTTCEETTEET---TS-SSEEEEECCTTSSSC--SSSCEEEEESC--HHHHHHHHHHTBTTEE
T ss_pred HHHHHHcCCeEEEECccccCCeECCeec---CC-CCeEEEeCCCCCccc--cccceEEEeCC--HHHHHHHHHHHhcCCc
Confidence 99999999999999999964 3333211 11 678899999 7774 45899999865 677777765432110
Q ss_pred -----------------------cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-C-----
Q 015768 266 -----------------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G----- 316 (400)
Q Consensus 266 -----------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~----- 316 (400)
+..+.+...++...++. +++..++.+++++++.+.|++++ +.+.. +
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~ 293 (393)
T 1mdo_A 219 VDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQK----LDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHI 293 (393)
T ss_dssp CC-----------CCEESSCCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEE
T ss_pred ccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCC
Confidence 12344444444444443 45666677778899999998887 45432 2
Q ss_pred CCceEEEeeCCCC--CCCHHHHHHHHHHhcCeEEeCCCcc--------------C-------CCCeEEEEecc-CCHHHH
Q 015768 317 EGAIYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGAC--------------G-------CRGHLRISFGG-LVEDDC 372 (400)
Q Consensus 317 ~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~--------------~-------~~~~iRi~~~~-~~~~~~ 372 (400)
.+++++|+.++.. ..+..++...|. ++||.+.+|..+ . ....+|++++. ++++|+
T Consensus 294 ~~~~~~~v~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i 372 (393)
T 1mdo_A 294 HAWHLFIIRVDEARCGITRDALMASLK-TKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDF 372 (393)
T ss_dssp CCCSCEEEECCHHHHSSCHHHHHHHHH-HTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHH
T ss_pred ceeEEEEEEecccccccCHHHHHHHHH-hCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHH
Confidence 3356788888730 136778888876 789999988754 1 13479999986 799999
Q ss_pred HHHHHHHHHHHHHH
Q 015768 373 KAAADRLRRGLEEL 386 (400)
Q Consensus 373 ~~~~~~l~~~l~~~ 386 (400)
+.++++|+++++..
T Consensus 373 ~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 373 DRVITALHQIAGQG 386 (393)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999887654
No 156
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=4.2e-32 Score=260.05 Aligned_cols=328 Identities=17% Similarity=0.134 Sum_probs=232.5
Q ss_pred CCeEEcCCC-CCCCCCcHHHHHHHHHhh---cCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 30 KNAVSLAQG-VVYWQPPKMAMEKVKELV---WDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 30 ~~~i~~~~~-~~~~~~~~~v~~a~~~~~---~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
.++|+|+.+ +++++.|+++.++..... .+.....|+ ..+.+ .++++++++++.+|. +++++++++++|+..+
T Consensus 89 ~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~--~~~i~~~sGt~al~~~ 164 (464)
T 1ibj_A 89 TLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA--DRAFCFTSGMAALSAV 164 (464)
T ss_dssp HHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC--SEEEEESSHHHHHHHH
T ss_pred CeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC--CeEEEECCHHHHHHHH
Confidence 467888886 777777787777665431 122244564 34555 789999999988885 3778888889999988
Q ss_pred HHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 106 VLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 106 ~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
+. +.++||+|+++.|+|+++... ++..|++++.+ |.+ |++++++.+++++ ++|++++|+||||.++
T Consensus 165 l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~------d~~~l~~~i~~~t--k~v~l~~p~NptG~v~ 234 (464)
T 1ibj_A 165 TH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRV-NTT------KLDEVAAAIGPQT--KLVWLESPTNPRQQIS 234 (464)
T ss_dssp HT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEE-CTT------SHHHHHHHCCSSE--EEEEECSSCTTTCCCC
T ss_pred HH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEe-CCC------CHHHHHHHhccCc--eEEEEeCCCCCCCEee
Confidence 75 778999999999999988764 45679999988 653 7899999998655 9999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHh
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKV 260 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~ 260 (400)
+ +++|.++|++||+++|+|++|..+.. ......+.++++.|+||+++. +|+++||++.++ +++++.+...
T Consensus 235 ~---l~~i~~la~~~gi~livDea~~~g~~----~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~--~~l~~~l~~~ 305 (464)
T 1ibj_A 235 D---IRKISEMAHAQGALVLVDNSIMSPVL----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG--EKLAKEVYFL 305 (464)
T ss_dssp C---HHHHHHHHHTTTCEEEEECTTTCTTT----CCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECS--HHHHHHHHHH
T ss_pred c---HHHHHHHHHHcCCEEEEECCCccccc----CChhhcCCEEEEECCcccccCCCCCcEEEEEECh--HHHHHHHHHH
Confidence 8 99999999999999999999985322 111224678999999999964 488999999885 5787888766
Q ss_pred hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH----------HHhccCCCCcccCCC---CceEEEeeCC
Q 015768 261 QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR----------EALSPLGEGAVKGGE---GAIYLWARLP 327 (400)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~----------~~L~~~~~~~~~~~~---~~~~~~~~~~ 327 (400)
......+.+++.++++..+++.....+++..+......+++. +.|++++.+.+..++ .+.++++.++
T Consensus 306 ~~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~ 385 (464)
T 1ibj_A 306 QNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG 385 (464)
T ss_dssp HHHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS
T ss_pred HHhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC
Confidence 544456678888888888887522222222222222222222 123333333333332 2567788874
Q ss_pred CCCCCHHHHHHHHHHhcCeEEeCCCc------------c----------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 328 EKHLDDFEVVRWLAHRHGVVVIPGGA------------C----------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 328 ~~~~~~~~~~~~l~~~~gi~v~~g~~------------~----------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
. ......+.+.| +..||.+.+|.. + + .++++|++++. |++++++++|+++++
T Consensus 386 ~-~~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~---edi~~li~~L~~al~ 460 (464)
T 1ibj_A 386 S-VALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI---EDVDDLISDLDIAFK 460 (464)
T ss_dssp C-HHHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS---SCHHHHHHHHHHHHH
T ss_pred C-HHHHHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHh
Confidence 2 10123455555 357888888751 1 1 15789999996 889999999999986
Q ss_pred H
Q 015768 385 E 385 (400)
Q Consensus 385 ~ 385 (400)
+
T Consensus 461 ~ 461 (464)
T 1ibj_A 461 T 461 (464)
T ss_dssp S
T ss_pred h
Confidence 5
No 157
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=100.00 E-value=1.5e-31 Score=258.03 Aligned_cols=347 Identities=12% Similarity=0.039 Sum_probs=246.3
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. +.++ .+|++++++.+.+.+.. ..+ ...+..+.+.++++++.+.++...+++++++|+++|++
T Consensus 51 ~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~-~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~ 128 (476)
T 3i5t_A 51 EDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLP-YAS-PWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVD 128 (476)
T ss_dssp TTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCC-CCC-TTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhcc-Ccc-cCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHH
Confidence 3578899998873 5565 68999999999887632 111 21456788899999999988767789999999999999
Q ss_pred HHHHHhcC--------CCCEEEEeCCCccchhHHHHhcCcE-------------EEEec-cCCCCCCCCC--------HH
Q 015768 104 NIVLTLCD--------AGDSVVMFAPYYFNSYMSFQMTGVT-------------HILVG-PCSSKTLHPD--------AD 153 (400)
Q Consensus 104 ~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~-~~~~~~~~~~--------~e 153 (400)
.+++++.. .++.|++..|+|++........+.. +..+. |....++..+ ++
T Consensus 129 ~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 208 (476)
T 3i5t_A 129 SALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQ 208 (476)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHH
Confidence 99999863 3579999999999877555433321 12220 2211111112 77
Q ss_pred HHHHhhcc-C-CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc-CCCcEEEEec
Q 015768 154 WLEKTLET-K-PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV-EGDHVVNLFS 229 (400)
Q Consensus 154 ~l~~~l~~-~-~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~~~i~~~s 229 (400)
+|++.++. . ..+++|+++.++|++|. +++.+++++|.++|++||+++|+||+|.++...+...... ..+....+.+
T Consensus 209 ~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t 288 (476)
T 3i5t_A 209 EFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT 288 (476)
T ss_dssp HHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE
T ss_pred HHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhh
Confidence 88888862 1 22477777777888885 7899999999999999999999999999876655332111 1111111336
Q ss_pred cccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 230 FSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 230 ~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
+||++| +| +|+|+++.+ +++++.+... ....+++.+++++.++.++|+..++ +++.++++++.+++
T Consensus 289 ~sK~l~-~G~~plg~v~~~---~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~--~~~~~~~~~~~~~l 362 (476)
T 3i5t_A 289 FAKGVT-SGYVPLGGLAIS---EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER--EGIVDQAREMADYF 362 (476)
T ss_dssp ECGGGG-TTSSCCEEEEEC---HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHH
T ss_pred hhhhhc-CCCcCeEEEEEC---HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHH
Confidence 789998 68 999999998 7888887653 3446788999999999999974221 34556667777777
Q ss_pred HHHhccC---CCCcccCCCCceEEEeeCCCCCC----------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768 302 REALSPL---GEGAVKGGEGAIYLWARLPEKHL----------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 367 (400)
Q Consensus 302 ~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~ 367 (400)
++.|+.+ +.+..+.+. +.++++.+..... ....++..++ ++||.+.|. .+++||+++. .
T Consensus 363 ~~~L~~l~~~~~v~~v~~~-G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRi~p~l~~ 435 (476)
T 3i5t_A 363 AAALASLRDLPGVAETRSV-GLVGCVQCLLDPTRADGTAEDKAFTLKIDERCF-ELGLIVRPL-----GDLCVISPPLII 435 (476)
T ss_dssp HHHHHTTTTSTTEEEEEEE-TTEEEEEECCC-----CCHHHHHHHHHHHHHHH-HTTEECEEE-----TTEEEECCCTTC
T ss_pred HHHHHHHhcCCCeEEEEec-CceeEEEEecCccccccccchhHHHHHHHHHHH-HCCCEEEec-----CCEEEEECCCCC
Confidence 7776654 333344455 5566666654210 1446677776 789999883 2899999665 7
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015768 368 VEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+++++++++++|+++++++.+
T Consensus 436 t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 436 SRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988764
No 158
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=100.00 E-value=1e-31 Score=258.06 Aligned_cols=340 Identities=16% Similarity=0.094 Sum_probs=239.5
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCC-CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGAD-EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
+|+.++||+.+. ++++ .+|++++++.+.+.+.. +... .+..+.+.++++.+.+.++.++++|++++|+++|++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~ 124 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECAL 124 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHH
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence 457789998765 4454 38999999999987642 2111 334556778888888877777899999999999999
Q ss_pred HHHHHhcC--------CCCEEEEeCCCccchhH-HHHhcCc------------EEEEeccCCC--C-CC-CCC-------
Q 015768 104 NIVLTLCD--------AGDSVVMFAPYYFNSYM-SFQMTGV------------THILVGPCSS--K-TL-HPD------- 151 (400)
Q Consensus 104 ~~~~~l~~--------~gd~vlv~~p~~~~~~~-~~~~~g~------------~~~~~~~~~~--~-~~-~~~------- 151 (400)
.+++++.. +||+|++.+|+|++... .+...|. .+..+ +.+. . ++ .+|
T Consensus 125 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~d~~~~~~~ 203 (449)
T 3a8u_X 125 TAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHL-PHTLLASNAYSRGMPKEGGIA 203 (449)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEE-CCCCCGGGTTCSSSCSSSHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEe-cCCccccCccccCChHHHHHH
Confidence 99998764 67999999999988653 4444331 23333 3321 1 00 135
Q ss_pred -HHHHHHhhccC--CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcccc--CCCcEE
Q 015768 152 -ADWLEKTLETK--PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCV--EGDHVV 225 (400)
Q Consensus 152 -~e~l~~~l~~~--~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~i 225 (400)
++.|++.++.. ..+++|+++..+|++|. +.+.+++++|.++|++||+++|+||+|..+...+...... ....++
T Consensus 204 ~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di 283 (449)
T 3a8u_X 204 LADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDL 283 (449)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSE
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCE
Confidence 89999988731 12355554444578996 6679999999999999999999999997665443321111 111223
Q ss_pred EEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHh---------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 015768 226 NLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV---------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLV 295 (400)
Q Consensus 226 ~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 295 (400)
+ |+||.++ +| +|+||++.+ +++++.+... ....+++.+++++.++.++|+...+ .+..++++
T Consensus 284 ~--s~sK~l~-~G~~~~G~~~~~---~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~ 355 (449)
T 3a8u_X 284 M--CIAKQVT-NGAIPMGAVIAS---TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK--ENLVQSVA 355 (449)
T ss_dssp E--EECGGGG-TTSSCCEEEEEE---HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH--TTHHHHHH
T ss_pred E--EEccccc-CCCCceEEEEEC---HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh--cCHHHHHH
Confidence 3 8899998 57 999999988 7888888753 2235677889999888888874221 24566777
Q ss_pred HHHHHHHHHhccCCCCcc---cCCCCceEEEeeCCCCCC----CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-C
Q 015768 296 RNREIIREALSPLGEGAV---KGGEGAIYLWARLPEKHL----DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-L 367 (400)
Q Consensus 296 ~~~~~l~~~L~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~ 367 (400)
++.+++++.|++++.... ..+ .++++|+.++.... +..++...|. ++||.+.++ .+++||+++. .
T Consensus 356 ~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-----g~~iRis~~~~~ 428 (449)
T 3a8u_X 356 EVAPHFEKALHGIKGAKNVIDIRN-FGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFG-----GDTLQFGPTFNS 428 (449)
T ss_dssp HHHHHHHHHHHTTTTSTTEEEEEE-ETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEE-----TTEEEECCCTTC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEee-eEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecC-----CCEEEEECCCcC
Confidence 888888888877542221 223 36888888875321 1236888776 679999986 2899999764 7
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 015768 368 VEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~ 386 (400)
+++++++++++|+++++++
T Consensus 429 t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 429 KPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp CHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 159
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=5e-31 Score=253.82 Aligned_cols=335 Identities=11% Similarity=0.044 Sum_probs=232.2
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.+++||..+....+.++++++++. .. ...|.+..+..++++++++++ + .+++++|+|+++|+..++.++
T Consensus 42 ~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~----~--~~~~~~~~~gt~a~~~al~~l 110 (456)
T 2ez2_A 42 DIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELF----G--FKHIVPTHQGRGAENLLSQLA 110 (456)
T ss_dssp GCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHH----C--CSEEEEESSHHHHHHHHHHHH
T ss_pred cceeeeccccCCccCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHh----C--CCcEEEeCCcHHHHHHHHHHh
Confidence 345555554444445677777665 22 235766677788999999987 4 358999999999999999999
Q ss_pred cCCCCEEEEeCCCc-cchhHHHHhcCcEEEEeccCCCC---------CCCCCHHHHHHhhccCC--CCeEEEEeCCCC-C
Q 015768 110 CDAGDSVVMFAPYY-FNSYMSFQMTGVTHILVGPCSSK---------TLHPDADWLEKTLETKP--TPKLVSVVNPGN-P 176 (400)
Q Consensus 110 ~~~gd~vlv~~p~~-~~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~e~l~~~l~~~~--~~~~v~l~~p~n-p 176 (400)
.++|| +++.|+| ..+...++..|++++.+ +.+++ ++.+|+++|++.+++++ .+++|++++|+| |
T Consensus 111 ~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~p 187 (456)
T 2ez2_A 111 IKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDI-VRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLA 187 (456)
T ss_dssp CCTTC--EEEESSCCHHHHHHHHHTTCEEEEC-BCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTT
T ss_pred CCCCC--EeccccccchhHHHHHHcCCEEEEe-cccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCC
Confidence 99999 7889999 66678889999999988 77632 35789999999987532 248899999998 9
Q ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEcccccc----------cccCCCCcc-----ccCCCcEEEEeccccccCCCccee
Q 015768 177 SGTYIPERLLKRISDLCKAAGSWLVVDNTYEY----------FMYDGRKHC-----CVEGDHVVNLFSFSKAYGMMGWRV 241 (400)
Q Consensus 177 tG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~----------~~~~~~~~~-----~~~~~~~i~~~s~sK~~g~~g~~~ 241 (400)
||.+++.+++++|.++|++||+++|+||+|+. +.+.+.... ...... +++.|++|..+ +| ++
T Consensus 188 tG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d-~~~~S~kk~~~-~~-~g 264 (456)
T 2ez2_A 188 GGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYAD-GCTMSGKKDCL-VN-IG 264 (456)
T ss_dssp TSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCS-EEEEETTTTTC-CS-SC
T ss_pred CCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCC-EEEEeCcccCC-CC-ce
Confidence 99999999999999999999999999999986 234443210 011222 44447788765 56 68
Q ss_pred EEEEccCCcHHHHHHHHHhhcc-----CCcCccHHHHHH-HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC
Q 015768 242 GYIAYPSEVEGFATQLLKVQDN-----IPICASIISQHL-ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG 315 (400)
Q Consensus 242 G~i~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (400)
||++.++ +++++.+...... ...+.+.....+ +...++... ++..++..++.+++.+.|++.+ +.+..
T Consensus 265 G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~~~l~~~L~~~g-~~~~~ 338 (456)
T 2ez2_A 265 GFLCMND--DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRYLGDKLKAAG-VPIVE 338 (456)
T ss_dssp EEEEESC--HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHTT-CCBCS
T ss_pred eEEEECC--HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHhcCC-Ccccc
Confidence 9999843 6777776654321 111223233333 222222111 3445555666778888887764 35666
Q ss_pred CCCceEEEeeCCC--CCCCHHHH-----HHHHHHhcCeEEeC-CCcc------------CCCCeEEEEecc--CCHHHHH
Q 015768 316 GEGAIYLWARLPE--KHLDDFEV-----VRWLAHRHGVVVIP-GGAC------------GCRGHLRISFGG--LVEDDCK 373 (400)
Q Consensus 316 ~~~~~~~~~~~~~--~~~~~~~~-----~~~l~~~~gi~v~~-g~~~------------~~~~~iRi~~~~--~~~~~~~ 373 (400)
|.+++++|+.+.. ...+..++ ..+|++++||.+.+ |..| ...+++||+++. +++++++
T Consensus 339 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~ 418 (456)
T 2ez2_A 339 PVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMD 418 (456)
T ss_dssp SCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHH
T ss_pred CCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHH
Confidence 7778888887631 11133344 66665688998765 4322 124789999984 5899999
Q ss_pred HHHHHHHHHHHHHh
Q 015768 374 AAADRLRRGLEELV 387 (400)
Q Consensus 374 ~~~~~l~~~l~~~~ 387 (400)
+++++|++++++..
T Consensus 419 ~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 419 VVADGIIKLYQHKE 432 (456)
T ss_dssp HHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999998754
No 160
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=100.00 E-value=1.4e-31 Score=254.57 Aligned_cols=335 Identities=12% Similarity=0.066 Sum_probs=240.8
Q ss_pred HHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC---CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCCh
Q 015768 22 IQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG---ADEGLPELRDALVKKLNQENKLYKSSVMVTAGA 98 (400)
Q Consensus 22 ~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~---~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~ 98 (400)
+++.|-..++.+.|+.+.+. +.|+++++++.+.+.+.....+. ...+.....+++.+.+++.+|++++++++|+|+
T Consensus 19 ~r~~f~~~~~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~ 97 (416)
T 1qz9_A 19 LRQQFALPEGVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTT 97 (416)
T ss_dssp GGGGBCCCTTCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCH
T ss_pred HHHhCCCCCCeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCCh
Confidence 34444444678889887765 67889999999988753111110 011333555667777777778888899999999
Q ss_pred HHHHHHHHHHhc------CCCCEE-EEeCCCccchhHHHH----hc--CcEEEEeccCCCCCCCCCHHHHHHhhccCCCC
Q 015768 99 NQAFVNIVLTLC------DAGDSV-VMFAPYYFNSYMSFQ----MT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTP 165 (400)
Q Consensus 99 t~a~~~~~~~l~------~~gd~v-lv~~p~~~~~~~~~~----~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~ 165 (400)
++++..++.++. ++||+| ++..++|+++...+. .. |++++.+ |. ++++++.+++++
T Consensus 98 t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--------~~~l~~~i~~~~-- 166 (416)
T 1qz9_A 98 SINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLV-DS--------PEELPQAIDQDT-- 166 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEE-SS--------GGGHHHHCSTTE--
T ss_pred hHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEe-Cc--------HHHHHHHhCCCc--
Confidence 999999998876 899874 555567766554432 23 9999888 64 678888887654
Q ss_pred eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCccee-EEE
Q 015768 166 KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRV-GYI 244 (400)
Q Consensus 166 ~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~-G~i 244 (400)
++|++++|+||||.+.+ +++|.++|++||+++|+|++|+... .+......+.++++.|+||+++ +|.++ |++
T Consensus 167 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~---~~~~~~~~~~d~~~~s~~K~l~-~g~~~~g~l 239 (416)
T 1qz9_A 167 AVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA---VPVDLHQAGADYAIGCTYKYLN-GGPGSQAFV 239 (416)
T ss_dssp EEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT---SCCCHHHHTCSEEEECSSSTTC-CCTTCCCEE
T ss_pred eEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccC---cCCChhhcCCCEEEecCcccCC-CCCCCeEEE
Confidence 99999999999999999 8999999999999999999998422 1111111245688999999984 67777 999
Q ss_pred EccCCcHHHHHHHHHhh-----------------------ccCCcCccHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHH
Q 015768 245 AYPSEVEGFATQLLKVQ-----------------------DNIPICASIISQHLALYSLQTG-PEWVTERVKDLVRNREI 300 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~ 300 (400)
+.+ +++++.+.... .....+++...+.++..+++.. .+++++..+++.+++++
T Consensus 240 ~~~---~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 316 (416)
T 1qz9_A 240 WVS---PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDL 316 (416)
T ss_dssp EEC---TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred EEC---HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 988 45544443321 1112346677776666666532 13467788889999999
Q ss_pred HHHHhccC-C--CCcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEec--cCCHHH
Q 015768 301 IREALSPL-G--EGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFG--GLVEDD 371 (400)
Q Consensus 301 l~~~L~~~-~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~--~~~~~~ 371 (400)
+.+.|+++ + ++.+..+. .+.++++.++. ..++...|. ++||.+.. ..++++||+++ .+++++
T Consensus 317 l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~-~~gi~~~~----~~~~~lRis~~~~~~t~~~ 387 (416)
T 1qz9_A 317 FIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE----GYAVIQALI-DRGVIGDY----REPRIMRFGFTPLYTTFTE 387 (416)
T ss_dssp HHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT----HHHHHHHHH-TTTEECEE----ETTTEEEEECCTTTCCHHH
T ss_pred HHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC----HHHHHHHHH-hCCcEecc----CCCCeEEEeCcccCCCHHH
Confidence 99999875 4 44555542 25678888873 677888776 78998753 24689999997 379999
Q ss_pred HHHHHHHHHHHHHHHh
Q 015768 372 CKAAADRLRRGLEELV 387 (400)
Q Consensus 372 ~~~~~~~l~~~l~~~~ 387 (400)
+++++++|++++++..
T Consensus 388 i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 388 VWDAVQILGEILDRKT 403 (416)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccc
Confidence 9999999999998754
No 161
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=100.00 E-value=3.6e-31 Score=250.84 Aligned_cols=349 Identities=16% Similarity=0.128 Sum_probs=241.4
Q ss_pred HHHHHHHHHhc-CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhcCCCCC
Q 015768 18 IMVQIQELVRG-AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQENKLYKS 90 (400)
Q Consensus 18 ~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~~~~~~ 90 (400)
.+..+.+..+. ...+++++.+ +++ |+++++++.+.+.+..... |.......++++.+++++++.+|.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~ 87 (405)
T 2vi8_A 11 VFAAIEQERKRQHAKIELIASE-NFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHA 87 (405)
T ss_dssp HHHHHHHHHHHHHHSEECCTTC-CCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHhhcceeeccCc-ccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce
Confidence 34444443332 2456666554 333 8999999998885321111 211122345665556677777787754
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH-H--HHhcC--cEEEEeccCCCCCCCCCHHHHHHhhcc-CCC
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM-S--FQMTG--VTHILVGPCSSKTLHPDADWLEKTLET-KPT 164 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~ 164 (400)
.+++++| ++++..++.++.++||+|+++.|+|+++.. . +...| .+++.+ +.+++++.+|++.+++.+++ ++
T Consensus 88 ~i~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~~i~~~~~- 164 (405)
T 2vi8_A 88 NVQPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAY-GVDPETHVIDYDDVREKARLHRP- 164 (405)
T ss_dssp ECCCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEE-CBCTTTCSBCHHHHHHHHHHHCC-
T ss_pred EEEecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEec-ccccccCCcCHHHHHHHHHhcCC-
Confidence 4444555 999999999999999999999999988753 1 12334 477777 76645567899999999975 54
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccC-CCcceeE
Q 015768 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYG-MMGWRVG 242 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g-~~g~~~G 242 (400)
++|++ +++|. |...+ +++|.++|++||+++|+|++|+.+.. .+...... ...+++++|+||+++ +.| |
T Consensus 165 -~~v~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~-~~~di~~~s~sK~~~g~~g---G 234 (405)
T 2vi8_A 165 -KLIVA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPV-PYAHFVTTTTHKTLRGPRG---G 234 (405)
T ss_dssp -SEEEE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSSTTCCCSC---E
T ss_pred -eEEEE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCcCCCcc-ccCCEEEEeccccCCCCCC---e
Confidence 88876 44443 56667 89999999999999999999985432 22211111 134588999999996 444 9
Q ss_pred EEEccCCcHHHHHHHHHhhccCCcCc-cHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-CCc
Q 015768 243 YIAYPSEVEGFATQLLKVQDNIPICA-SIISQHLALYSLQTG-PEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGA 319 (400)
Q Consensus 243 ~i~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~ 319 (400)
|++++ +++.+.+........++. +.....++..+++.. .+++++..+++.++++++.+.|++++ +.+..+ ..+
T Consensus 235 ~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 310 (405)
T 2vi8_A 235 MILCQ---EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEG-FTLVSGGTDN 310 (405)
T ss_dssp EEEEC---HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-CEEGGGSCSS
T ss_pred EEEEc---HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeEecCCCCc
Confidence 99988 788888876654334433 444555545566532 25678888999999999999999884 466554 347
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCc----c--CCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHHHh
Q 015768 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGA----C--GCRGHLRISFGG-----LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~----~--~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+++|+.++....+..++...| .++||.+.+|.. + ..++++|++++. ++++++++++++|++++++..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 311 HLLLVDLRPQQLTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp SEEEEECGGGTCCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred eEEEEEccCCCCCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 889999874333577788777 589999998752 1 235789999984 579999999999999987653
No 162
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=7.4e-31 Score=256.15 Aligned_cols=309 Identities=13% Similarity=0.080 Sum_probs=235.5
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCC--CcE--EEeCChHHHHHHHHHHhcCCC--------CEEEEeCCCccchhHH
Q 015768 62 SKYGADEGLPELRDALVKKLNQENKLYK--SSV--MVTAGANQAFVNIVLTLCDAG--------DSVVMFAPYYFNSYMS 129 (400)
Q Consensus 62 ~~y~~~~g~~~~~~~~a~~l~~~~~~~~--~~i--~~~~g~t~a~~~~~~~l~~~g--------d~vlv~~p~~~~~~~~ 129 (400)
..|....+...+++++++++.+.+|.+. +++ ++|+|+++++..++.++.++| |+|+++.++|.++...
T Consensus 129 ~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~ 208 (514)
T 3mad_A 129 LHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKA 208 (514)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHH
Confidence 3444455667889999999999998764 678 999999999999999998766 8999999999999999
Q ss_pred HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
++..|++++.+ |.++ ++.+|+++|++.+++++ ++|++++|+||+|.+.+ +++|.++|++||+++|+|++|+.+
T Consensus 209 ~~~~G~~v~~v-~~~~-~~~~d~~~Le~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~ 281 (514)
T 3mad_A 209 AQYFGIKLVRT-PLDA-DYRADVAAMREAITPNT--VVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGF 281 (514)
T ss_dssp HHHHTCEEEEE-CBCT-TSCBCHHHHHHHCCTTE--EEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTT
T ss_pred HHHcCCeeEEe-eeCC-CCCCCHHHHHHHhccCC--EEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccc
Confidence 99999999999 8876 45789999999998755 99999999999999999 899999999999999999999976
Q ss_pred ccC-----CC---CccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----------ccCCcCcc--
Q 015768 210 MYD-----GR---KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ----------DNIPICAS-- 269 (400)
Q Consensus 210 ~~~-----~~---~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~----------~~~~~~~~-- 269 (400)
... +. .......+.++++.|++|+++ +|.++|+++.++ +.+........ .....+.+
T Consensus 282 ~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~ 358 (514)
T 3mad_A 282 ILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGY-GAKGTSVILYRR--PDLLHYQYFIAADWPGGLYFSPTFAGSRPGA 358 (514)
T ss_dssp THHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTC-CCSSCEEEEESS--HHHHTTTCEEESSCTTCSEEESSSCSSCCHH
T ss_pred cchhHHhcCCCCCcccccCCCCcEEEECchhccC-CCCCeEEEEEeC--HHHhccccccccccCCCcccCCccCCCCchH
Confidence 431 11 222233466889999999964 678899998885 33322110000 00011222
Q ss_pred -HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEE
Q 015768 270 -IISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVV 348 (400)
Q Consensus 270 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v 348 (400)
...+.++...+. .+++++..+++.++++++.+.|++++.+.+..+. ..++++..+. .+..++.++|. ++||.+
T Consensus 359 ~~~a~~aal~~l~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~--~~~~~l~~~L~-~~Gi~v 432 (514)
T 3mad_A 359 LSATAWAAMLSLG--EEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDE--LNIYQVMEEMA-GRGWRL 432 (514)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSS--SCHHHHHHHHH-TTTCBC
T ss_pred HHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCC--CCHHHHHHHHH-hcCCEe
Confidence 233444444443 3567888899999999999999998766766555 3466666643 36788888886 789988
Q ss_pred eCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 349 IPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 349 ~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
+|. ..++++|++++. .+++++++++++|+++++++.+.
T Consensus 433 -~g~--~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~ 472 (514)
T 3mad_A 433 -NGL--HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAH 472 (514)
T ss_dssp -EEE--TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHC
T ss_pred -ccC--CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 433 236789999874 46799999999999999987653
No 163
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-30 Score=250.22 Aligned_cols=361 Identities=15% Similarity=0.117 Sum_probs=247.1
Q ss_pred HHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHH--HHHH-HHHH
Q 015768 9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELR--DALV-KKLN 82 (400)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~--~~~a-~~l~ 82 (400)
+++.......+..+.+..+...+.|+|..+.+.. +|++++++.+.+.+....+|+. ..+....+ ++++ ++++
T Consensus 24 ~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la 101 (447)
T 3h7f_A 24 APLAEVDPDIAELLAKELGRQRDTLEMIASENFV--PRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAK 101 (447)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCC--CHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHH
Confidence 3344445555666655555555778987665543 8999999988875422222321 12444444 5566 7788
Q ss_pred hhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh-HH----HHhcCcEEEEeccCCCCCCCCCHHHHHH
Q 015768 83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-MS----FQMTGVTHILVGPCSSKTLHPDADWLEK 157 (400)
Q Consensus 83 ~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~-~~----~~~~g~~~~~~~~~~~~~~~~~~e~l~~ 157 (400)
+.+|.+. ..++++|+++|+..++.++.++||+|+++.|+|.++. .. +...+..++.+ +.+++++.+|++++++
T Consensus 102 ~~~g~~~-~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~ 179 (447)
T 3h7f_A 102 ALFGAEF-ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFY-GVDPATHLIDMDAVRA 179 (447)
T ss_dssp HHHTCSE-EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEE-CCCTTTCSCCHHHHHH
T ss_pred HHcCCCc-eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEc-CcCcccCCcCHHHHHH
Confidence 7778754 2333788899999999999999999999999997732 11 22234567777 7776666789999999
Q ss_pred hhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-cccCCCCccccCCCcEEEEeccccccCC
Q 015768 158 TLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-FMYDGRKHCCVEGDHVVNLFSFSKAYGM 236 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 236 (400)
.+...+ +++|++++|+||++. + +++|.++|++||+++|+|++|.. +.+.+...... ...++++.|+||+++
T Consensus 180 ~i~~~~-~~~i~~~~~~~~~~~--~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~- 251 (447)
T 3h7f_A 180 TALEFR-PKVIIAGWSAYPRVL--D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLG- 251 (447)
T ss_dssp HHHHHC-CSEEEEECSSCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGC-
T ss_pred HHHhcC-CeEEEEcCCCCCCcc--C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCC-
Confidence 986322 489988889998876 5 89999999999999999999753 33333222111 234688999999984
Q ss_pred CcceeEEEEccCCcHHHHHHHHHhhccCCcC-ccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccC-----C
Q 015768 237 MGWRVGYIAYPSEVEGFATQLLKVQDNIPIC-ASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL-----G 309 (400)
Q Consensus 237 ~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-----~ 309 (400)
|+|+||++++ +++.+.+.........+ ++.....++..++.. ..++++++.+++.++++++.+.|++. +
T Consensus 252 -G~~gG~i~~~---~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g 327 (447)
T 3h7f_A 252 -GGRSGLIVGK---QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAG 327 (447)
T ss_dssp -CCSCEEEEEC---GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTT
T ss_pred -CCCeEEEEEC---HHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 7888999988 67777776654433333 344444555555543 23467888999999999999999987 5
Q ss_pred CCccc-CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CC--CccCCCCeEEEEecc-----CCHHHHHHHHH
Q 015768 310 EGAVK-GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PG--GACGCRGHLRISFGG-----LVEDDCKAAAD 377 (400)
Q Consensus 310 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g--~~~~~~~~iRi~~~~-----~~~~~~~~~~~ 377 (400)
. .+. ++..++++++.+.....+...+.. +++++||.+. |+ ..+..++++|+++.. .++++++++++
T Consensus 328 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~ 405 (447)
T 3h7f_A 328 V-SVVSGGTDVHLVLVDLRDSPLDGQAAED-LLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVAD 405 (447)
T ss_dssp C-EEGGGSCSSSEEEEECTTSSCCHHHHHH-HHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHH
T ss_pred e-EEecCCCCCCEEEEEcCCCCCCHHHHHH-HHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHH
Confidence 4 443 334477888888654435555554 5567899998 55 333456889998753 47899999999
Q ss_pred HHHHHHHHHh
Q 015768 378 RLRRGLEELV 387 (400)
Q Consensus 378 ~l~~~l~~~~ 387 (400)
.|.+++.+..
T Consensus 406 ~l~~~l~~~~ 415 (447)
T 3h7f_A 406 IIATALATGS 415 (447)
T ss_dssp HHHHHHHSGG
T ss_pred HHHHHHhccC
Confidence 9999987654
No 164
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.9e-30 Score=247.30 Aligned_cols=360 Identities=15% Similarity=0.120 Sum_probs=234.5
Q ss_pred HHhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHH
Q 015768 9 KRALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLN 82 (400)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~ 82 (400)
.++.......+..+....+...+.++|..+.+.. ++++++++.+.+.+....+|+ .....+.+++...++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 88 (425)
T 3ecd_A 11 QSLAERDASVRGAILKELERQQSQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVK 88 (425)
T ss_dssp CCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHH
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHH
Confidence 3444443333444433333445678887776554 899999999888542111121 11111233333336666
Q ss_pred hhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh-H--HHHhcCc--EEEEeccCCCCCCCCCHHHHHH
Q 015768 83 QENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY-M--SFQMTGV--THILVGPCSSKTLHPDADWLEK 157 (400)
Q Consensus 83 ~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~-~--~~~~~g~--~~~~~~~~~~~~~~~~~e~l~~ 157 (400)
+.+|.+. ..++++|+++++..++.++.++||+|+++.|+|++.. . .....|. .++.+ +.+++++.+|++++++
T Consensus 89 ~~~~~~~-~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~d~~~l~~ 166 (425)
T 3ecd_A 89 RLFNAGH-ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQY-GVSRDTMLIDYDQVEA 166 (425)
T ss_dssp HHHTCSE-EECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEE-CCCTTTSSCCHHHHHH
T ss_pred HHhCCCC-ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeec-CCCcccCccCHHHHHH
Confidence 6667654 2345888999999999999999999999999998722 2 2223343 66677 7776667889999999
Q ss_pred hhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCCCccccCCCcEEEEeccccccC
Q 015768 158 TLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGRKHCCVEGDHVVNLFSFSKAYG 235 (400)
Q Consensus 158 ~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~g 235 (400)
.++ .++ ++|++++|+|| ...+ +++|.++|++||+++|+||+|+... +.+...... ...+++++|+||++
T Consensus 167 ~i~~~~~--~~v~~~~~~~~--~~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~-~~~di~~~s~sK~l- 237 (425)
T 3ecd_A 167 LAQQHKP--SLIIAGFSAYP--RKLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV-EHAHVVTSTTHKTL- 237 (425)
T ss_dssp HHHHHCC--SEEEEECSCCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG-GTCSEEEEESSGGG-
T ss_pred HHhhcCC--cEEEEccccCC--CcCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCch-hcCcEEEecCCccc-
Confidence 997 454 99999988885 4566 8899999999999999999965433 333222211 12458899999998
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhhccCCc-CccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQDNIPI-CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV 313 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 313 (400)
+|.|+||++.++ +++.+.+......... +++.....++..++.. ..++++++.+++.++++++.+.|++.+. .+
T Consensus 238 -~g~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~ 313 (425)
T 3ecd_A 238 -RGPRGGFVLTND--EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGV-DL 313 (425)
T ss_dssp -CCCSCEEEEESC--HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EE
T ss_pred -CCCCcEEEEeCC--HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC-ee
Confidence 467899999885 5677777665433222 3444444444444432 3356678888999999999999998664 44
Q ss_pred cCC-CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCCcc--CCCCeEEEEecc-----CCHHHHHHHHHHHHH
Q 015768 314 KGG-EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGAC--GCRGHLRISFGG-----LVEDDCKAAADRLRR 381 (400)
Q Consensus 314 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~~--~~~~~iRi~~~~-----~~~~~~~~~~~~l~~ 381 (400)
..+ ..++++|+.++....+...+...| +++||.+. ||..+ ..++++|++++. .++++++++++.|++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~ 392 (425)
T 3ecd_A 314 VTGGTDNHLLLVDLRPKGLKGAQVEQAL-ERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILE 392 (425)
T ss_dssp GGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEeCCCCCCHHHHHHHH-HHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHH
Confidence 433 357888888865434566676655 58899999 44321 134689999553 348999999999999
Q ss_pred HHHHH
Q 015768 382 GLEEL 386 (400)
Q Consensus 382 ~l~~~ 386 (400)
++++.
T Consensus 393 ~l~~~ 397 (425)
T 3ecd_A 393 VFEAL 397 (425)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 99886
No 165
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.98 E-value=1.2e-31 Score=256.15 Aligned_cols=338 Identities=12% Similarity=0.071 Sum_probs=229.8
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. +.++ .||++++++.+.+.+.....| +.....++++.+++ .++ .++++++++|+++|++
T Consensus 50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~l~~~la~----~~~-~~~~v~~~~~Gsea~~ 123 (429)
T 3k28_A 50 IDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGA-PTEIENKLAKLVIE----RVP-SIEIVRMVNSGTEATM 123 (429)
T ss_dssp TTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHH----HST-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCC-CCHHHHHHHHHHHH----hCC-CCCEEEEeCChHHHHH
Confidence 4578899999886 4555 589999999998876433223 33333444444444 444 5789999999999999
Q ss_pred HHHHHhcC--CCCEEEEeCCCccchhHHHHh-cCcEEEEeccCCC-CCCC------------CCHHHHHHhhccC-CCCe
Q 015768 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQM-TGVTHILVGPCSS-KTLH------------PDADWLEKTLETK-PTPK 166 (400)
Q Consensus 104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~-~~~~------------~~~e~l~~~l~~~-~~~~ 166 (400)
.+++.+.. ++++|++.+|+|++....... .|.....+ +... .+.. -|++++++.++.. ..++
T Consensus 124 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 202 (429)
T 3k28_A 124 SALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATL-GLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIA 202 (429)
T ss_dssp HHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC------CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEE
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCccccc-CCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEE
Confidence 99988764 668999999999876543322 22211111 1111 1110 1789999988732 1235
Q ss_pred EEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEE
Q 015768 167 LVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIA 245 (400)
Q Consensus 167 ~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~ 245 (400)
+|++..++|++|.+ .+.+++++|.++|++||+++|+||+|.++ ..+........+....+.++||.+| +|+|+||++
T Consensus 203 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~~iG~~~ 280 (429)
T 3k28_A 203 CVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIG-GGLPVGAYG 280 (429)
T ss_dssp EEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGG-TTSCCEEEE
T ss_pred EEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhc-CCCCeEEEE
Confidence 56555556666665 46888999999999999999999999877 4442211111111122447899997 699999999
Q ss_pred ccCCcHHHHHHHHHhh---ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCC
Q 015768 246 YPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEG 318 (400)
Q Consensus 246 ~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~ 318 (400)
++ +++++.+.... ...+++.+++++.++.++|+..+ ++..++++++++++++.|+++ +......+.
T Consensus 281 ~~---~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~- 353 (429)
T 3k28_A 281 GK---AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT---PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRA- 353 (429)
T ss_dssp EC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-
T ss_pred Ec---HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEee-
Confidence 98 78877765422 34577889999999999998643 466677777777777777653 443444444
Q ss_pred ceEEEeeCCCCCC------------CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHL------------DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 319 ~~~~~~~~~~~~~------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~ 386 (400)
+.++++.+..... ...+++..++ ++||.+.|+. .+.+|+++. .+++++++++++|+++++++
T Consensus 354 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~r~~~~-~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 354 GSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMV-EQGVFLPPSQ----FEGLFLSTV-HSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST----TSCBCCCTT-CCHHHHHHHHHHHHHHHHTC
T ss_pred ccEEEEEEecCCcccccccccccHHHHHHHHHHHH-HCCeEEecCC----CCCEEEECC-CCHHHHHHHHHHHHHHHHHH
Confidence 5666666543210 1256777776 7899999863 467888776 49999999999999998764
No 166
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.98 E-value=3.4e-31 Score=247.25 Aligned_cols=324 Identities=13% Similarity=0.089 Sum_probs=232.0
Q ss_pred eEEcCCCCCCCCCcHHHHHHHHHhhcCCCCC------CCCCCCCcHHHHHHHHHHHHhhcCCCCC-c-EEEeCChHHHHH
Q 015768 32 AVSLAQGVVYWQPPKMAMEKVKELVWDPSIS------KYGADEGLPELRDALVKKLNQENKLYKS-S-VMVTAGANQAFV 103 (400)
Q Consensus 32 ~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~~~~~~a~~l~~~~~~~~~-~-i~~~~g~t~a~~ 103 (400)
.+.+..+ +.++|+.+++++.+.+.+.... ......+..++++++++.+++.+|++++ + +++|+|+|++++
T Consensus 5 ~~l~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~ 82 (362)
T 2c0r_A 5 AYNFNAG--PAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFA 82 (362)
T ss_dssp CEECCSS--SCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHH
T ss_pred eeeccCC--CCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHH
Confidence 3455554 3578899999999988542110 0101223455788899999888898764 6 467799999999
Q ss_pred HHHHHhcCCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCCC---CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768 104 NIVLTLCDAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSS---KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (400)
Q Consensus 104 ~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~---~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG 178 (400)
.++.++.+|||+|++..+.|++. ...++..| +++.+ +.+. .+..++.+.++ ++++ +++|++++|+||||
T Consensus 83 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v-~~~~~~~~~~~~~~~~~~--i~~~--t~~v~~~~~~n~tG 156 (362)
T 2c0r_A 83 MIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVA-ASSEASNYMTLPKLQEIQ--LQDN--AAYLHLTSNETIEG 156 (362)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEE-EECGGGTTCSCCCGGGCC--CCTT--EEEEEEESEETTTT
T ss_pred HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEE-ecccccccccCCCHHHcc--cCCC--cCEEEEeCCcCccc
Confidence 99999999999999887776553 35667789 88888 7652 33345665553 5544 49999999999999
Q ss_pred cC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 179 TY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 179 ~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
.+ .+ +++| +|+++++|++|+.+.. +.... +.++++.|+||++|++| +||++.+ +++++.+
T Consensus 157 ~~~~~---l~~i------~~~~vivD~a~~~~~~---~~~~~--~~d~~~~s~~K~~g~~G--~G~l~~~---~~~~~~l 217 (362)
T 2c0r_A 157 AQFKA---FPDT------GSVPLIGDMSSDILSR---PFDLN--QFGLVYAGAQKNLGPSG--VTVVIVR---EDLVAES 217 (362)
T ss_dssp EECSS---CCCC------TTSCEEEECTTTTTSS---CCCGG--GCSEEEEETTTTTCCSS--CEEEEEE---GGGSSSC
T ss_pred eeccc---cccc------CCCEEEEEChhhccCC---ccchh--HCcEEEEeccccccCcC--cEEEEEc---HHHHhhc
Confidence 96 45 5554 8999999999986532 11111 12588899999998777 8999988 4554443
Q ss_pred HHh------------hccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCC-cccC---CCCc
Q 015768 258 LKV------------QDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AVKG---GEGA 319 (400)
Q Consensus 258 ~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~---~~~~ 319 (400)
... .....++++.+.+.++..+++...+ .++++.++++++++++.+.|++++.+ .+.. ..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 297 (362)
T 2c0r_A 218 PKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSD 297 (362)
T ss_dssp CTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCS
T ss_pred cccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCC
Confidence 321 1123467888888888888874222 56888899999999999999988732 4322 1234
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.++++.++.. .+..+++.+| .++||.+.+|..+ .+++|+|++. +++++++++++.|+++++++
T Consensus 298 ~~~~~~~~~~-~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 298 MNITFRLASE-ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp SEEEEECSCH-HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCCc-chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5677887642 2466788876 4789998887655 4689999987 78999999999999887654
No 167
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.98 E-value=1e-30 Score=252.44 Aligned_cols=326 Identities=14% Similarity=0.110 Sum_probs=226.8
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcC----CCCE---EEE
Q 015768 46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCD----AGDS---VVM 118 (400)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~----~gd~---vlv 118 (400)
+.+.+++.+.+..+ ...|++..+..++++++++++ + .+++++|+|+|+|++.++.++.+ +||+ |++
T Consensus 55 ~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~----~--~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv 127 (467)
T 1ax4_A 55 NAMSDHQWAAMITG-DEAYAGSRNYYDLKDKAKELF----N--YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFI 127 (467)
T ss_dssp CCEEHHHHHHHHTC-CCCSSSCHHHHHHHHHHHHHH----C--CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEE
T ss_pred HHHHHHHHHHHhhc-ccccccCccHHHHHHHHHHHc----C--CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEE
Confidence 56667777766544 335766667788899988887 4 37899999999999999999988 9998 999
Q ss_pred eCCCccchhHHHHhcCcEEEEeccCCC---------CCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHHHH
Q 015768 119 FAPYYFNSYMSFQMTGVTHILVGPCSS---------KTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPERLL 186 (400)
Q Consensus 119 ~~p~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~npt-G~~~~~~~l 186 (400)
+.+.|..+...+...|..++.+ +.+. .++.+|++.|++.+++. ..+++|++++|+||+ |.+++.+++
T Consensus 128 ~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l 206 (467)
T 1ax4_A 128 SNFHFDTTAAHVELNGCKAINI-VTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNL 206 (467)
T ss_dssp ESSCCHHHHHHHHHTTCEEEEC-BCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHH
T ss_pred eccccchhhHHHhccCCceecc-cccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHH
Confidence 8555566677888889888776 4321 13467999999999742 125999999999999 899999999
Q ss_pred HHHHHHHHHcCCEEEEcccccc-c---------ccCCCCccccC----CCcEEEEeccccccCCC-cceeEEEEccCCcH
Q 015768 187 KRISDLCKAAGSWLVVDNTYEY-F---------MYDGRKHCCVE----GDHVVNLFSFSKAYGMM-GWRVGYIAYPSEVE 251 (400)
Q Consensus 187 ~~i~~l~~~~~~~li~D~a~~~-~---------~~~~~~~~~~~----~~~~i~~~s~sK~~g~~-g~~~G~i~~~~~~~ 251 (400)
++|.++|++||+++|+|+++.. . .+.+....... ...++++.|+||.+|++ | |+++.++ +
T Consensus 207 ~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~d--~ 281 (467)
T 1ax4_A 207 KEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG---GLVAIRD--N 281 (467)
T ss_dssp HHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC---EEEEESS--C
T ss_pred HHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc---eEEEeCC--H
Confidence 9999999999999999998664 1 12222111110 11236678999999755 3 7777764 5
Q ss_pred -HHHHHHHHhhc----cCCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEEee
Q 015768 252 -GFATQLLKVQD----NIPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLWAR 325 (400)
Q Consensus 252 -~~~~~l~~~~~----~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 325 (400)
++++.+..... ...+ ..+.....++..+++...+ .+..++..++++.+.+.|++. .+.+..+.+++++|+.
T Consensus 282 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~ 358 (467)
T 1ax4_A 282 EEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE--EEYLHYRIGQVKYLGDRLREA-GIPIQYPTGGHAVFVD 358 (467)
T ss_dssp HHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEE
T ss_pred HHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHhC-CCCcccCCCceEEEEe
Confidence 67666654322 1122 2233333333334543222 123333446677788888774 3456567778899988
Q ss_pred -------CCCCCCCHHHHHHHHHHhcCeEEeC-CCcc-------C-----CCCeEEEEec-c-CCHHHHHHHHHHHHHHH
Q 015768 326 -------LPEKHLDDFEVVRWLAHRHGVVVIP-GGAC-------G-----CRGHLRISFG-G-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 326 -------~~~~~~~~~~~~~~l~~~~gi~v~~-g~~~-------~-----~~~~iRi~~~-~-~~~~~~~~~~~~l~~~l 383 (400)
++....+..++..+|+.++||.+.| |..+ + ..+++||+++ . ++++++++++++|++++
T Consensus 359 ~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 438 (467)
T 1ax4_A 359 CKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLK 438 (467)
T ss_dssp STTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTH
T ss_pred hhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence 4322224677888885689999998 5432 1 1379999998 3 68999999999999999
Q ss_pred HHHh
Q 015768 384 EELV 387 (400)
Q Consensus 384 ~~~~ 387 (400)
++..
T Consensus 439 ~~~~ 442 (467)
T 1ax4_A 439 EKFA 442 (467)
T ss_dssp HHHT
T ss_pred Hhhh
Confidence 8754
No 168
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.97 E-value=9.6e-30 Score=238.45 Aligned_cols=313 Identities=12% Similarity=0.086 Sum_probs=228.5
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh---cCCCCEEEEe
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL---CDAGDSVVMF 119 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l---~~~gd~vlv~ 119 (400)
++|+++++++.+.+.+.. |.+.....++++.+++++ |.+ ++++++|+++|+..++.++ .++||+|+++
T Consensus 10 ~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~----~~~--~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~ 80 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFL----GVK--HALVFNSATSALLTLYRNFSEFSADRNEIITT 80 (375)
T ss_dssp CCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred CCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHh----CCC--eEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC
Confidence 467999999999987532 334445667778877777 544 8999999999999999999 8899999999
Q ss_pred CCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (400)
Q Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (400)
.|+|+++...++..|++++.+ +.++++ .+|++.+++.+++++ ++|+++++ ||.+.+ +++|.++|++||++
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~~-~~~~~~-~~d~~~l~~~i~~~~--~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~ 150 (375)
T 2fnu_A 81 PISFVATANMLLESGYTPVFA-GIKNDG-NIDELALEKLINERT--KAIVSVDY---AGKSVE---VESVQKLCKKHSLS 150 (375)
T ss_dssp SSSCTHHHHHHHHTTCEEEEC-CBCTTS-SBCGGGSGGGCCTTE--EEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred CCccHhHHHHHHHCCCEEEEe-ccCCCC-CCCHHHHHhhcCcCc--eEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence 999999999999999999999 887766 789999999987654 88887765 999999 89999999999999
Q ss_pred EEEcccccccccCCCCccccCCCcEEEEeccc--cccCCCcceeEEEEc-cCCcHHHHHHHHHhhccC------------
Q 015768 200 LVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAY-PSEVEGFATQLLKVQDNI------------ 264 (400)
Q Consensus 200 li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~-~~~~~~~~~~l~~~~~~~------------ 264 (400)
+|+|++|+.+....... ....+ ++++.|+| |++|. | +|+++. ++ +++++++.......
T Consensus 151 li~D~a~~~~~~~~~~~-~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (375)
T 2fnu_A 151 FLSDSSHALGSEYQNKK-VGGFA-LASVFSFHAIKPITT-A--EGGAVVTND--SELHEKMKLFRSHGMLKKDFFEGEVK 223 (375)
T ss_dssp EEEECTTCTTCEETTEE-TTSSS-SEEEEECCTTSSSCC-S--SCEEEEESC--HHHHHHHHHHTBTTEEESSSSCEEES
T ss_pred EEEECccccCCeECCee-ccccC-CeEEEeCCCCCCccc-c--CceEEEeCC--HHHHHHHHHHHhcCCccccccccccc
Confidence 99999998654321111 11111 46677777 99974 5 577665 43 56777776654211
Q ss_pred --C--cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-----CCceEEEeeCCCCCC-CHH
Q 015768 265 --P--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-----EGAIYLWARLPEKHL-DDF 334 (400)
Q Consensus 265 --~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~ 334 (400)
. +..+.+...+....+ +++++..++.+++++++.+.|++++++.+..+ ...+++++.++.... +..
T Consensus 224 ~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (375)
T 2fnu_A 224 SIGHNFRLNEIQSALGLSQL----KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKK 299 (375)
T ss_dssp SCCCBCCCCHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHH
T ss_pred cccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHH
Confidence 1 123333333322222 33567788889999999999999865455443 123445677764222 467
Q ss_pred HHHHHHHHhcCeEEeCCCc-------cC-------C-------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 335 EVVRWLAHRHGVVVIPGGA-------CG-------C-------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~-------~~-------~-------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
++...|. ++||.+..+.. |+ . .+++||+++. ++++++++++++|+++++++
T Consensus 300 ~l~~~L~-~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 300 LILESLH-KRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHHHH-HTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7888775 78999984321 10 1 2679999987 79999999999999998764
No 169
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.3e-30 Score=242.98 Aligned_cols=287 Identities=20% Similarity=0.192 Sum_probs=213.8
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~ 143 (400)
......++++++++++.+|. +++++++|+++|+..++.++.++||+|+++.|+|+++...++ ..|++++.+ |.
T Consensus 77 r~~~p~~~~l~~~la~~~g~--~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~ 153 (414)
T 3ndn_A 77 RYGNPTVSVFEERLRLIEGA--PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFV-DG 153 (414)
T ss_dssp TTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CT
T ss_pred CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEe-CC
Confidence 33445677777777777774 678999999999999999999999999999999999877664 489999998 65
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
+ |++++++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.+..... ...+.
T Consensus 154 ~------d~~~l~~ai~~~t--~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~----~~~g~ 218 (414)
T 3ndn_A 154 D------DLSQWERALSVPT--QAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQG----FPLGV 218 (414)
T ss_dssp T------CHHHHHHHTSSCC--SEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCC----GGGTC
T ss_pred C------CHHHHHHhcCCCC--eEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCCc----hhcCC
Confidence 4 7899999998766 99999999999999999 88999999999999999999985543221 23345
Q ss_pred EEEEeccccccCCCc-ceeEEEEccCCcHHHHH-HHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFAT-QLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREII 301 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l 301 (400)
++++.|+||++|.+| +++|+++.+ ++.+. .+.........+.++...+++...++. +..+.+++.++++.+
T Consensus 219 div~~S~sK~l~~~G~~~~G~vv~~---~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l 291 (414)
T 3ndn_A 219 DVVVYSGTKHIDGQGRVLGGAILGD---REYIDGPVQKLMRHTGPAMSAFNAWVLLKGLET----LAIRVQHSNASAQRI 291 (414)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEEC---HHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHH
T ss_pred CeEeccCCccccCCCCceEEEEEEC---HHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 789999999998667 889999998 55544 555444333444566655555555543 567777888889999
Q ss_pred HHHhccCCCCc-ccCCC----------------CceEEEeeCCCC----CCCHHHHHHHHHHhcCeEEeCCCccC-----
Q 015768 302 REALSPLGEGA-VKGGE----------------GAIYLWARLPEK----HLDDFEVVRWLAHRHGVVVIPGGACG----- 355 (400)
Q Consensus 302 ~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~----- 355 (400)
.+.|++.+.+. +..|. .+.++++.++.. ..+..+++..+ +..++.+..|..+.
T Consensus 292 ~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~p 370 (414)
T 3ndn_A 292 AEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLGDAKSLVTHP 370 (414)
T ss_dssp HHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCSCSSCEEECG
T ss_pred HHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCCCCCceeeCc
Confidence 99998876532 22221 367888888642 11245566555 35677777776441
Q ss_pred ------------------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 356 ------------------CRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 356 ------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
.++.+|||++. |+.+++++.|++++
T Consensus 371 ~~~~~~~~~~~~~~~~g~~~~~iRlsvG~---e~~~dli~dl~~al 413 (414)
T 3ndn_A 371 ATTTHRAMGPEGRAAIGLGDGVVRISVGL---EDTDDLIADIDRAL 413 (414)
T ss_dssp GGTTTCTTHHHHHHHTTCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeCc---CCHHHHHHHHHHhh
Confidence 25789999997 55666777777765
No 170
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=1.4e-31 Score=249.62 Aligned_cols=325 Identities=12% Similarity=0.084 Sum_probs=232.4
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCC---CCCCCCC---CCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCCh-HHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDP---SISKYGA---DEGLPELRDALVKKLNQENKLY-KSSVMVTAGA-NQAF 102 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~-t~a~ 102 (400)
..+++..|.. ++|+.+++++.+.+.+. ....|+. ..+..++.+++.+++++.+|++ ++++++++|+ |+|+
T Consensus 3 ~~~~~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al 80 (360)
T 1w23_A 3 QVFNFNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQF 80 (360)
T ss_dssp CCEECCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred ceEeecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHH
Confidence 3566666643 67899999999988642 1112222 2334456777777777777886 5799999998 9999
Q ss_pred HHHHHHhcCC---CCEEEEeCCCccchhHHHHhcCcEEEEeccCCC-CCCCCCHHHHHH-hhccCCCCeEEEEeCCCCCC
Q 015768 103 VNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSS-KTLHPDADWLEK-TLETKPTPKLVSVVNPGNPS 177 (400)
Q Consensus 103 ~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~e~l~~-~l~~~~~~~~v~l~~p~npt 177 (400)
..++.++..+ ||.|+++.++|.. ...++..| +++.+ |.++ ++ .+|++++++ .+++++ |+|++++|+|||
T Consensus 81 ~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v-~~~~~~~-~~d~~~l~~~~i~~~~--k~v~~~~~~npt 154 (360)
T 1w23_A 81 TMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIA-ASTKANS-YQSIPDFSEFQLNEND--AYLHITSNNTIY 154 (360)
T ss_dssp HHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEE-EECGGGT-SCSCCCGGGCCCCTTE--EEEEEESEETTT
T ss_pred HHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEe-ecccccC-cCCccchHhhccCCCC--CEEEEeCCCCCc
Confidence 9999999865 5677777777754 34467789 99999 8775 44 368889988 776554 999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 178 GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 178 G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
|.+++ ++.+ +||+++|+|++|+.+... ...... +++++|+||.+|++| +||++.+ +++++++
T Consensus 155 G~~~~--~i~~------~~~~~li~D~a~~~~~~~---~~~~~~--di~~~s~sK~~~~~G--~G~~~~~---~~~~~~~ 216 (360)
T 1w23_A 155 GTQYQ--NFPE------INHAPLIADMSSDILSRP---LKVNQF--GMIYAGAQKNLGPSG--VTVVIVK---KDLLNTK 216 (360)
T ss_dssp TEECS--SCCC------CCSSCEEEECTTTTTSSC---CCGGGC--SEEEEETTTTTSCTT--CEEEEEE---HHHHCSC
T ss_pred ceecc--cccc------cCCceEEEechhhcCCCC---cCcccC--CEEEEEcccccCCCC--cEEEEEc---HHHHhhc
Confidence 99987 2332 799999999999865432 111112 488999999998555 8999988 6666554
Q ss_pred HHhh------------ccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCC-ccc-CC--CCc
Q 015768 258 LKVQ------------DNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AVK-GG--EGA 319 (400)
Q Consensus 258 ~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~-~~--~~~ 319 (400)
.... .....+++...+.++..+++...+ +++++.++++++++++.+.|++++.+ ... .+ .++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 296 (360)
T 1w23_A 217 VEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSL 296 (360)
T ss_dssp CTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCS
T ss_pred ccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccC
Confidence 3321 011234566666666666653222 56788889999999999999988743 322 12 335
Q ss_pred eEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.++|+.++.. .+..++.++|. ++||.+.+|..+ ++++|++++. ++++++++++++|++++++
T Consensus 297 ~~~~~~~~~~-~~~~~~~~~l~-~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 297 MNVTFNLRNE-ELNQQFLAKAK-EQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp SEEEEECSSH-HHHHHHHHHHH-HTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCCC-ccHHHHHHHHH-HCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 5889998742 13456777764 799999887653 6899999997 7899999999999988753
No 171
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=1.3e-30 Score=248.24 Aligned_cols=358 Identities=14% Similarity=0.086 Sum_probs=233.3
Q ss_pred hcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhcC
Q 015768 13 ETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQENK 86 (400)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~~ 86 (400)
......+..+.+..+...+.+.+..+.+. .||++++++.+.+.+....+ |......+.+++.+.+++.+.+|
T Consensus 13 ~~~~~i~~~~~~~~~~~~~~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 90 (420)
T 3gbx_A 13 DYDAELWQAMEQEKVRQEEHIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG 90 (420)
T ss_dssp HHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHhhhcceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence 34333444443333333355666555444 58999999998884422111 22223334556656677777778
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHhc--CcEEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
++++++++++| ++++..++.++.++||+|+++.|+|.++. ..+... +...+.+ +.++ ++.+|++++++.+++
T Consensus 91 ~~~~~v~~~sG-s~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~d~~~l~~~i~~ 167 (420)
T 3gbx_A 91 ADYANVQPHSG-SQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPY-GIDE-SGKIDYDEMAKLAKE 167 (420)
T ss_dssp CSEEECCCSSH-HHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEE-EECT-TCSCCHHHHHHHHHH
T ss_pred CCCceeEecCc-HHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEec-cCCc-cCCcCHHHHHHHHHh
Confidence 87766766555 78999999999999999999999997743 222222 3455556 5553 346899999999985
Q ss_pred CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccccccCCCcce
Q 015768 162 KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 162 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~g~~ 240 (400)
+. +++|++++|+||+ ..+ +++|.++|++||+++|+||+|+.+.. .+. ........+++++|+||+++ |.+
T Consensus 168 ~~-~~~v~~~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~di~~~s~sK~~~--g~~ 238 (420)
T 3gbx_A 168 HK-PKMIIGGFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGV-YPNPVPHAHVVTTTTHKTLA--GPR 238 (420)
T ss_dssp HC-CSEEEECCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTS-SCCSTTTSSEEEEESSGGGC--SCS
T ss_pred cC-CeEEEEecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceeccc-CCcccccCCEEEeecccCCC--CCC
Confidence 32 4999998888863 667 88999999999999999999864433 322 11222236699999999995 455
Q ss_pred eEEEEccCCcHHHHHHHHHhhccCCc-CccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-C
Q 015768 241 VGYIAYPSEVEGFATQLLKVQDNIPI-CASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-E 317 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~ 317 (400)
.||++.++..+++.+.+......... +++...+.++..++.. ..++++++.+++.++++++.+.|++.+. .+..+ .
T Consensus 239 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~~~~~ 317 (420)
T 3gbx_A 239 GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGY-KVVSGGT 317 (420)
T ss_dssp CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTC-EEGGGSC
T ss_pred ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCC-eeccCCC
Confidence 69999983212677777655433222 3344444444444432 3466788889999999999999988654 44432 4
Q ss_pred CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC-------CCccCCCCeEEEEecc-----CCHHHHHHHHHHHHHHHHH
Q 015768 318 GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP-------GGACGCRGHLRISFGG-----LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~-------g~~~~~~~~iRi~~~~-----~~~~~~~~~~~~l~~~l~~ 385 (400)
.++++|+.++....+...+...| +++||.+.+ +..+ .+..+||+++. .++++++++++.|++++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~-~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 318 ENHLFLLDLVDKNLTGKEADAAL-GRANITVNKNSVPNDPKSPF-VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp SSSEEEEECGGGTCCHHHHHHHH-HHTTEECEEECCTTCSSCTT-TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHH-HHCCcEeccccCCCCccccC-CCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 57888888765434566666655 589999988 3333 34569999864 3579999999999998876
Q ss_pred Hh
Q 015768 386 LV 387 (400)
Q Consensus 386 ~~ 387 (400)
..
T Consensus 396 ~~ 397 (420)
T 3gbx_A 396 IN 397 (420)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 172
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.97 E-value=3e-30 Score=246.28 Aligned_cols=332 Identities=14% Similarity=0.110 Sum_probs=226.9
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. ++++ .+|++++++.+.+.+... |+. ..+.+.++++++.+.++ .++++++++|+++|++
T Consensus 49 ~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~ 122 (427)
T 3fq8_A 49 VDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP-SIEMVRFVNSGTEACM 122 (427)
T ss_dssp TTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence 3568899999886 4454 589999999999876422 322 45677888888888776 6899999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHHhc-Cc-------------------EEEEeccCCCCCCCCCHHHHHHhhcc
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQMT-GV-------------------THILVGPCSSKTLHPDADWLEKTLET 161 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g~-------------------~~~~~~~~~~~~~~~~~e~l~~~l~~ 161 (400)
.+++... ..++.|++..|+|++........ |. .++.+ |.+ |++++++.++.
T Consensus 123 ~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------d~~~le~~l~~ 195 (427)
T 3fq8_A 123 AVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTT-PYN------DLEAVKALFAE 195 (427)
T ss_dssp HHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEE-ETT------CHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeec-CCC------CHHHHHHHHHh
Confidence 9995442 23578999999998755432221 11 12222 211 78999999875
Q ss_pred C-CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcc
Q 015768 162 K-PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 162 ~-~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 239 (400)
. ..+++|+++.++|++|.+. +.+++++|.++|++||+++|+||+|.++ ..+........+....+.|+||+++ +|+
T Consensus 196 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~-~G~ 273 (427)
T 3fq8_A 196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIG-GGL 273 (427)
T ss_dssp STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGG-TTS
T ss_pred CCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhh-CCc
Confidence 3 2246777666677788765 4667999999999999999999999977 4332211111111122458899998 899
Q ss_pred eeEEEEccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc----cCCCCc
Q 015768 240 RVGYIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS----PLGEGA 312 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~----~~~~~~ 312 (400)
|+||++.+ +++++.+... ....+++.+++++.++.++++...+ +++.++++++.+++++.|+ .++...
T Consensus 274 ~~G~~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 348 (427)
T 3fq8_A 274 PVGAYGGK---REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ--PGTYEYLDQITKRLSDGLLAIAQETGHAA 348 (427)
T ss_dssp SCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS--TTHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ceEEEEEc---HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 99999998 7888777642 2345677899999999988863111 2333444444455444444 344322
Q ss_pred ccCCCCceEEEeeCCCCCCC------------HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHH
Q 015768 313 VKGGEGAIYLWARLPEKHLD------------DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLR 380 (400)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~ 380 (400)
...+ .+.++++.++..... ..+++..++ ++||.+.++.. ..+|+++. .+++++++++++|+
T Consensus 349 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gi~v~~~~~----~r~~~~~~-~t~e~i~~~l~~l~ 421 (427)
T 3fq8_A 349 CGGQ-VSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGML-EQGIYLAPSQF----EAGFTSLA-HTEEDIDATLAAAR 421 (427)
T ss_dssp EEEE-ETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTT-CCHHHHHHHHHHHH
T ss_pred EEEE-eeeEEEEEEecCccccccccccccHHHHHHHHHHHH-HCCcEEecCCC----CCEEeeCc-CCHHHHHHHHHHHH
Confidence 3333 377788887643212 346777775 78999998652 34555544 59999999999999
Q ss_pred HHHHH
Q 015768 381 RGLEE 385 (400)
Q Consensus 381 ~~l~~ 385 (400)
+++++
T Consensus 422 ~~l~~ 426 (427)
T 3fq8_A 422 TVMSA 426 (427)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 173
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.97 E-value=1.9e-29 Score=244.80 Aligned_cols=348 Identities=15% Similarity=0.057 Sum_probs=254.2
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEE---EeCChHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVM---VTAGANQAF 102 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~---~~~g~t~a~ 102 (400)
++++.+++.. .....+++.+.+++.+.+..+ ...|...++..++++++.+++++.+|++ ++++. +|+|+++++
T Consensus 53 ~gnp~~~l~s-~~t~~~~~~v~~~l~~~~~~~-~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~ 130 (502)
T 3hbx_A 53 DGNPRLNLAS-FVTTWMEPECDKLIMSSINKN-YVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAI 130 (502)
T ss_dssp SCCGGGBTTC-CSCCCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHH
T ss_pred CCCCCceecc-ccCCCCCHHHHHHHHHHhccC-CCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHH
Confidence 3444444433 122346788999999887664 3334444557789999999999999987 55544 589999999
Q ss_pred HHHHHHhcCC--------CC-----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEE
Q 015768 103 VNIVLTLCDA--------GD-----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169 (400)
Q Consensus 103 ~~~~~~l~~~--------gd-----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~ 169 (400)
..++.++..+ |+ +|+++.++|.++...++..|++++.+ |.+++++.+|++++++.+.+++ ++|+
T Consensus 131 ~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~t--~~v~ 207 (502)
T 3hbx_A 131 MLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEV-KLSEGYYVMDPQQAVDMVDENT--ICVA 207 (502)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEE-CCBTTBCSCCHHHHHHHCCTTE--EEEE
T ss_pred HHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEE-ecCCCcCcCCHHHHHHHHhhCC--EEEE
Confidence 9999888654 76 99999999999999999999999999 8877657899999999998765 8999
Q ss_pred EeCCCCCCccCCCHHHHHHHHHHHHHc------CCEEEEcccccccc----cCCCCccccCCCcEEEEeccccccCCCcc
Q 015768 170 VVNPGNPSGTYIPERLLKRISDLCKAA------GSWLVVDNTYEYFM----YDGRKHCCVEGDHVVNLFSFSKAYGMMGW 239 (400)
Q Consensus 170 l~~p~nptG~~~~~~~l~~i~~l~~~~------~~~li~D~a~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~g~~g~ 239 (400)
+++|+||||.+.| +++|.++|+++ |+++++|++|+.+. ....+......+.+++..|.+|+++ ++.
T Consensus 208 ~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~-~p~ 283 (502)
T 3hbx_A 208 AILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGL-VYA 283 (502)
T ss_dssp EEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTC-CCS
T ss_pred EecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccC-CCC
Confidence 9999999999999 88889999998 99999999998664 2222222223467788899999884 567
Q ss_pred eeEEEEccCCcHHHHHHHHHhh-cc---------CCcCc---cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768 240 RVGYIAYPSEVEGFATQLLKVQ-DN---------IPICA---SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306 (400)
Q Consensus 240 ~~G~i~~~~~~~~~~~~l~~~~-~~---------~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 306 (400)
++|+++.++ ++.+....... .. ..++. ..+.++++...+. .+.+.++.++..++++++.+.|+
T Consensus 284 g~G~~~~~~--~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg--~~g~~~~~~~~~~~a~~l~~~L~ 359 (502)
T 3hbx_A 284 GIGWVIWRN--KEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG--HEGYRNVMENCRENMIVLREGLE 359 (502)
T ss_dssp SCEEEEESS--GGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeC--HHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 789887765 33321111100 00 01111 3344444444443 34467888889999999999999
Q ss_pred cCCCCcccCC-CCceEEEeeCCCC-CCCHHHHHHHHHHhcCeEEeCCCcc---CCCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768 307 PLGEGAVKGG-EGAIYLWARLPEK-HLDDFEVVRWLAHRHGVVVIPGGAC---GCRGHLRISFGG-LVEDDCKAAADRLR 380 (400)
Q Consensus 307 ~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~---~~~~~iRi~~~~-~~~~~~~~~~~~l~ 380 (400)
+++.+.+..+ ...+++.++++.. ..+..++.+.|. ++||.+.....+ ....++||+++. +++++++.+++.|+
T Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~-~~Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~ 438 (502)
T 3hbx_A 360 KTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLR-RYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIE 438 (502)
T ss_dssp TTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHH-TTTCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHH
T ss_pred hCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHH-hCCcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHH
Confidence 9986666655 3467777787642 235668888775 889987432222 234689999987 89999999999999
Q ss_pred HHHHHHhcc
Q 015768 381 RGLEELVKD 389 (400)
Q Consensus 381 ~~l~~~~~~ 389 (400)
++++.+.+.
T Consensus 439 ~~l~~l~~~ 447 (502)
T 3hbx_A 439 KVMRELDEL 447 (502)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 999988653
No 174
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=4.1e-31 Score=246.37 Aligned_cols=330 Identities=11% Similarity=0.036 Sum_probs=228.7
Q ss_pred cCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 28 GAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 28 ~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
+......+..+.++++++|++++++.+.+.. ..|++..+..++++.+++++ +.+ ..++++|+++++..++.
T Consensus 11 ~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~---~~~~~~~~~~~l~~~la~~~----~~~--~~i~~~~g~~a~~~a~~ 81 (359)
T 3pj0_A 11 QKTPYKLGGNGPRNVGVLTEALQNIDDNLES---DIYGNGAVIEDFETKIAKIL----GKQ--SAVFFPSGTMAQQIALR 81 (359)
T ss_dssp HTCSEESSSSSCCBHHHHHHHTTTSCTTCBC---CBTTBSHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHH
T ss_pred HhcchhhcCCCccccCCCHHHHHHHHhhccc---CcccCCHHHHHHHHHHHHHh----CCC--cEEEeCCHHHHHHHHHH
Confidence 3355667777777778889999888775443 34655556677777777776 543 34666888999999999
Q ss_pred HhcCCCCE--EEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC-ccCC
Q 015768 108 TLCDAGDS--VVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS-GTYI 181 (400)
Q Consensus 108 ~l~~~gd~--vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt-G~~~ 181 (400)
++.++||+ |+++.++|.... ......|++++.+ |.+ .+.+|++++++. .++ +++|++++|+||+ |.++
T Consensus 82 ~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~--~~~~d~~~l~~~-~~~--~~~v~~~~p~n~~~G~~~ 155 (359)
T 3pj0_A 82 IWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLL-GTA--NQLLTIDDIKSL-REP--VSSVLIELPQREIGGQLP 155 (359)
T ss_dssp HHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEEC-SCT--TSCCCHHHHHTC-SSC--CSEEEEESSBGGGTSBCC
T ss_pred HHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEec-CCc--CCCcCHHHHHhc-cCC--ceEEEEEecccCCCcccC
Confidence 99988886 555555554332 1225579999988 763 346899999988 444 5999999999988 7999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccc--CCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMY--DGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+.+++++|.++|++||+++|+|++|..+.. .+..........++++.|+||+++.++ + |+++.+ +++++++..
T Consensus 156 ~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~-g-g~~~~~---~~l~~~~~~ 230 (359)
T 3pj0_A 156 AFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIA-G-AILAGN---DDFVQEAKI 230 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSS-C-EEEEEC---HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcc-e-EEEECC---HHHHHHHHH
Confidence 999999999999999999999999875442 111111111234466779999987442 2 778877 788888876
Q ss_pred hhccCC--cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCCC-CCHHH
Q 015768 260 VQDNIP--ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKH-LDDFE 335 (400)
Q Consensus 260 ~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~ 335 (400)
...... .........++..+++.. .+..+++.++++++.+.|++++++.+. .+..++++|+.++... .+..+
T Consensus 231 ~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (359)
T 3pj0_A 231 WKRRYGGDLISLYPYILSADYYFEKR----IGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAI 306 (359)
T ss_dssp HHHHTTCCCSCCHHHHHHHHHHHHHH----GGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHH
T ss_pred HHHHhCCCcchhHHHHHHHHHHHHHH----HHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHH
Confidence 443222 112222333333444421 244455778888999999998665663 4556788888876421 12456
Q ss_pred HHHHHHHhcCeEEeCCCccCC--CCeEEEEecc----CCHHHHHHHHHHHHHH
Q 015768 336 VVRWLAHRHGVVVIPGGACGC--RGHLRISFGG----LVEDDCKAAADRLRRG 382 (400)
Q Consensus 336 ~~~~l~~~~gi~v~~g~~~~~--~~~iRi~~~~----~~~~~~~~~~~~l~~~ 382 (400)
+.+.| .++||.+.||..|.. .+++|++++. .+.+++++++++|.++
T Consensus 307 l~~~l-~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 307 LTKIQ-DETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp HHHHH-HHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHH-HhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 66666 589999999987753 4589998862 4789999999999875
No 175
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=2e-30 Score=250.31 Aligned_cols=333 Identities=18% Similarity=0.149 Sum_probs=244.4
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCC---CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGA---DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVL 107 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~ 107 (400)
.++.|+ +..+ ...|++++++.+.+.. ...|.+ ..|..++++++++++++.+|++. .+++++|+++++..++.
T Consensus 67 ~~~~lg-~~~~-~~~p~v~~~~~~~~~~--~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~ 141 (474)
T 1wyu_B 67 TFYPLG-SCTM-KYNPKLHEEAARLFAD--LHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGIL 141 (474)
T ss_dssp SCCCBT-TTCC-CCCCHHHHHHHHTTSS--CCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHH
T ss_pred Cccccc-cccc-cCCHHHHHHHHHHHHh--cCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHH
Confidence 356666 3222 3456777777766332 344543 45667899999999999988764 46678999999998666
Q ss_pred Hh----cCCCC-----EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768 108 TL----CDAGD-----SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (400)
Q Consensus 108 ~l----~~~gd-----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG 178 (400)
++ .++|| +|+++.++|+++...++..|++++.+ |.+++ +.+|+++|++.+++++ ++|++++| ||+|
T Consensus 142 ~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v-~~~~~-~~~d~~~L~~~i~~~t--~~v~~~~p-n~~G 216 (474)
T 1wyu_B 142 IIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREI-PSGPE-GEVDLEALKRELGPHV--AALMLTNP-NTLG 216 (474)
T ss_dssp HHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEE-CBCTT-SSBCHHHHHHHCSTTE--EEEEECSS-CTTS
T ss_pred HHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEe-cCCCC-CCcCHHHHHHhhCCCc--eEEEEECC-CCCc
Confidence 65 35787 99999999999999999999999999 88754 5789999999998665 89999998 6899
Q ss_pred cC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCC-c---ceeEEEEccCCcHHH
Q 015768 179 TY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMM-G---WRVGYIAYPSEVEGF 253 (400)
Q Consensus 179 ~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~-g---~~~G~i~~~~~~~~~ 253 (400)
.+ .+ +++|.++|++||+++|+|++|..+..+.. .....+.++++.|+||+++.+ | .|+||++.+ +++
T Consensus 217 ~~~~~---l~~i~~l~~~~g~~li~Dea~~~~~~g~~--~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~---~~l 288 (474)
T 1wyu_B 217 LFERR---ILEISRLCKEAGVQLYYDGANLNAIMGWA--RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVK---AHL 288 (474)
T ss_dssp CCCTT---HHHHHHHHHHHTCEEEEEGGGGGGTTTTC--CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEEC---GGG
T ss_pred ccCCC---HHHHHHHHHHcCCEEEEeCchhhhhccCC--CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEc---HHH
Confidence 88 46 99999999999999999999986654321 111224678899999999755 3 589999998 555
Q ss_pred HHHHHH-h------------------hccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccCCCCcc
Q 015768 254 ATQLLK-V------------------QDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPLGEGAV 313 (400)
Q Consensus 254 ~~~l~~-~------------------~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 313 (400)
++.+.. . ....+++.+.+.+.++..++.. +.++++++.+++.++++++.+.|++++ +.+
T Consensus 289 ~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~ 367 (474)
T 1wyu_B 289 APYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRV 367 (474)
T ss_dssp GGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBC
T ss_pred HHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-cEe
Confidence 554431 0 0112234567777777777763 346677888889999999999998873 354
Q ss_pred cCCCCce-EEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 314 KGGEGAI-YLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 314 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
..+...+ .+++.++. ..+..++..+|. ++||.+ ++..|. .++++||+++. ++++++++++++|++++++
T Consensus 368 ~~~~~~~~~~~~~~~~-~~~~~~l~~~L~-~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 368 PYDGPSMHEFVAQPPE-GFRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp SSCSSCCSCEEEBCST-TCCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred cCCCCcceEEEEEcCC-CCCHHHHHHHHH-HCCccc-cccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 3222122 15556632 236788998887 679985 554443 36899999986 6899999999999998865
No 176
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.97 E-value=3e-30 Score=241.94 Aligned_cols=319 Identities=15% Similarity=0.148 Sum_probs=233.5
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL 109 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l 109 (400)
.++++|+.+.+.+. + +.+++.+.+... .|.+..+..++++.+++++ +. +++++++|+|+|+..++.++
T Consensus 6 ~~~~~l~~~~~~~~--~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~~gt~a~~~~~~~~ 73 (374)
T 3uwc_A 6 VPYSYLERQFADIE--P-YLNDLREFIKTA---DFTLGAELEKFEKRFAALH----NA--PHAIGVGTGTDALAMSFKML 73 (374)
T ss_dssp BCSCCHHHHTSSCH--H-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHT----TC--SEEEEESCHHHHHHHHHHHT
T ss_pred ceeeccccCCCCch--H-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHc
Confidence 45677777766653 3 888888877653 3656677788888888887 43 48899999999999999999
Q ss_pred -cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 110 -CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 110 -~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.++||+|+++.|+|+++...++..|++++.+ +.+ +++.+|++.+++.+++++ ++|+ |+||||.+.+ +++
T Consensus 74 ~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~-~~~-~~~~~d~~~l~~~~~~~~--~~v~---~~n~~G~~~~---~~~ 143 (374)
T 3uwc_A 74 NIGAGDEVITCANTFIASVGAIVQAGATPVLV-DSE-NGYVIDPEKIEAAITDKT--KAIM---PVHYTGNIAD---MPA 143 (374)
T ss_dssp TCCTTCEEEEESSSCHHHHHHHHHTTCEEEEE-CBC-TTSSBCGGGTGGGCCTTE--EEEC---CBCGGGCCCC---HHH
T ss_pred CCCCCCEEEECCCccHHHHHHHHHcCCEEEEE-ecC-CCCCcCHHHHHHhCCCCc--eEEE---EeCCcCCcCC---HHH
Confidence 8999999999999999999999999999999 887 556789999999987654 7776 8899999999 899
Q ss_pred HHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhcc--
Q 015768 189 ISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-- 263 (400)
Q Consensus 189 i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~-- 263 (400)
|.++|++||+++|+|++|+.+.. .+... ....++++.|+| |+++.+|. +|+++.++ +++.+.+......
T Consensus 144 i~~~~~~~~~~li~D~~~~~g~~~~~~~~---~~~~d~~~~s~~~~K~l~~~g~-~g~~~~~~--~~~~~~~~~~~~~~~ 217 (374)
T 3uwc_A 144 LAKIAKKHNLHIVEDACQTILGRINDKFV---GSWGQFACFSLHPLKNLNVWSD-AGVIITHS--DEYAEKLRLYRNHGL 217 (374)
T ss_dssp HHHHHHHTTCEEEEECTTCTTCEETTEET---TSSSSEEEEECSSSSSSCCSSC-CEEEEESC--HHHHHHHHHHTBTTE
T ss_pred HHHHHHHcCCEEEEeCCCccCceeCCeec---cccccEEEEeCCCCCcCCccce-eEEEEeCC--HHHHHHHHHHHhcCc
Confidence 99999999999999999986542 22111 111357777866 99974354 88888775 6777777665421
Q ss_pred ----------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCC-CcccC-CCCceE----EEeeCC
Q 015768 264 ----------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGE-GAVKG-GEGAIY----LWARLP 327 (400)
Q Consensus 264 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~-~~~~~~----~~~~~~ 327 (400)
.++..+.+...+....+ +.+++..++.+++.+++.+.|++++. +.+.. +.+... +.+..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (374)
T 3uwc_A 218 INRDVCVEYGINCRMDTIQAVIANRLM----NQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVK 293 (374)
T ss_dssp EETTEESSCCCBCBCCHHHHHHHHHHG----GGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEET
T ss_pred cccCccccccccCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcC
Confidence 12223434333333333 22566777888888999999998874 34332 221222 222222
Q ss_pred CCCCCHHHHHHHHHHhcCeEEeCCCccC-----------------------CCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 328 EKHLDDFEVVRWLAHRHGVVVIPGGACG-----------------------CRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 328 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+..++...|. ++||.+.++.... ..+.+|++++. ++++|++++++.|++++
T Consensus 294 ----~~~~l~~~L~-~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 368 (374)
T 3uwc_A 294 ----YRDQLFQYLK-DNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFY 368 (374)
T ss_dssp ----THHHHHHHHH-HTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHH-HCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 5678888775 7899998875110 01689999887 89999999999999988
Q ss_pred HH
Q 015768 384 EE 385 (400)
Q Consensus 384 ~~ 385 (400)
++
T Consensus 369 ~~ 370 (374)
T 3uwc_A 369 LE 370 (374)
T ss_dssp HT
T ss_pred Hh
Confidence 75
No 177
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.97 E-value=6e-31 Score=253.78 Aligned_cols=338 Identities=11% Similarity=-0.003 Sum_probs=232.2
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcC---CCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWD---PSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNI 105 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~---~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~ 105 (400)
++.+.|+.+... +.|+.+.+++.+.+.. .....|. ...+...+.+.+.+++++.+|+++++|++|+|+|++++.+
T Consensus 66 ~~~iyld~~~~g-~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~ 144 (465)
T 3e9k_A 66 ENAIYFLGNSLG-LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLL 144 (465)
T ss_dssp CBCEECBTTTSC-CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHH
T ss_pred CCeEEecCCccC-CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHH
Confidence 367788776544 3455565555554421 1111111 1122233444455555555588899999999999999999
Q ss_pred HHHhcCCCCE---EEEeCCCccchhH----HHHhcCcEE----EEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCC
Q 015768 106 VLTLCDAGDS---VVMFAPYYFNSYM----SFQMTGVTH----ILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNP 173 (400)
Q Consensus 106 ~~~l~~~gd~---vlv~~p~~~~~~~----~~~~~g~~~----~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p 173 (400)
+.++.++|+. |+++.|+|++... .++..|+++ +.+.|.++ ++.+|++++++.++.+ ..+++|+++++
T Consensus 145 ~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~-~~~~d~~~l~~~i~~~~~~~~lv~~~~~ 223 (465)
T 3e9k_A 145 MLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREG-EETLRIEDILEVIEKEGDSIAVILFSGV 223 (465)
T ss_dssp HHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTT-CSSCCHHHHHHHHHHHGGGEEEEEEESB
T ss_pred HHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCC-CCccCHHHHHHHHHhcCCCeEEEEEeCc
Confidence 9999876654 9999999988544 566688764 23314443 4578999999999721 22599999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 253 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~ 253 (400)
+||||.+.| +++|.++|++||+++|+|++|+.+.. +......+.++++.|++|+++.++.++|+++.+ +++
T Consensus 224 ~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~---~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~---~~~ 294 (465)
T 3e9k_A 224 HFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNV---ELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIH---EKH 294 (465)
T ss_dssp CTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHHHTCCEEEECSSSTTCCCTTCCCEEEEC---GGG
T ss_pred ccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCc---CCchhhcCCCEEEECcccccccCCCceEEEEEc---HHH
Confidence 999999999 88899999999999999999984322 222223456789999999993233367888887 455
Q ss_pred HHHHHHhhc-------------------------cCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhcc
Q 015768 254 ATQLLKVQD-------------------------NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 254 ~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~ 307 (400)
.+.+..... ....+++.+...++..+++...++ +++.+++..++++++.+.|++
T Consensus 295 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (465)
T 3e9k_A 295 AHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKH 374 (465)
T ss_dssp TTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHh
Confidence 443321100 011256667777777777643332 677888888999999998887
Q ss_pred C----------CCCcccCCC----CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHH
Q 015768 308 L----------GEGAVKGGE----GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDD 371 (400)
Q Consensus 308 ~----------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~ 371 (400)
+ +++.+..|. .+.++++.++. +..++...|. ++||.+.. ..++++||++ +. ++++|
T Consensus 375 ~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~---~~~~l~~~L~-~~Gi~v~~----~~~~~iRis~~~~~~t~ed 446 (465)
T 3e9k_A 375 NYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV---PNKDVFQELE-KRGVVCDK----RNPNGIRVAPVPLYNSFHD 446 (465)
T ss_dssp HCC---------CEEECSCSSGGGBCSCEEEEECC---TTCCHHHHHH-TTTEECEE----ETTTEEEEBCCTTTCCHHH
T ss_pred hccccccccCCCCeEEeCCCCHhhcccEEEEEecC---CHHHHHHHHH-HCCEEEec----CCCCEEEEeCcccCCCHHH
Confidence 4 444565543 26677777762 4567788775 78999873 3578999998 45 89999
Q ss_pred HHHHHHHHHHHHHHH
Q 015768 372 CKAAADRLRRGLEEL 386 (400)
Q Consensus 372 ~~~~~~~l~~~l~~~ 386 (400)
++++++.|++++++.
T Consensus 447 i~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 447 VYKFTNLLTSILDSA 461 (465)
T ss_dssp HHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988754
No 178
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=1e-30 Score=243.55 Aligned_cols=299 Identities=15% Similarity=0.100 Sum_probs=210.6
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCC--EEEEeCCCccchhH---HHHhcCcE
Q 015768 62 SKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGD--SVVMFAPYYFNSYM---SFQMTGVT 136 (400)
Q Consensus 62 ~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd--~vlv~~p~~~~~~~---~~~~~g~~ 136 (400)
..|++..+..++++.+++++ |. +..++++|+++++..++.++.++|| .|+++.++|+.... .....|++
T Consensus 41 ~~y~~~~~~~~l~~~la~~~----~~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~ 114 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVL----GM--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHPIE 114 (357)
T ss_dssp EETTEETTHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSSCE
T ss_pred ccccCChHHHHHHHHHHHHh----CC--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccCcE
Confidence 45766677888888888887 54 3446668888999999999998888 67777776655443 35567899
Q ss_pred EEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCC-ccCCCHHHHHHHHHHHHHcCCEEEEcccccccc--cCC
Q 015768 137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPS-GTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM--YDG 213 (400)
Q Consensus 137 ~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~npt-G~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~--~~~ 213 (400)
++.+ +.+ .+.+|++++++.. + ++++++++|+||+ |.+++.+++++|+++|++||+++|+|++|.... ..+
T Consensus 115 ~~~v-~~~--~~~~d~~~l~~~~--~--~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 115 TILV-GAA--DRLMTLDEIKALP--D--IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp EEEC-SCT--TSCCCHHHHHTCC--S--CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred EEEe-cCC--CCCcCHHHHhcCc--C--cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 9888 643 2368999999873 2 4999999999998 999999999999999999999999999987221 111
Q ss_pred CCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC--cCccHHHHHHHHHHhcCCcHHHHHHH
Q 015768 214 RKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP--ICASIISQHLALYSLQTGPEWVTERV 291 (400)
Q Consensus 214 ~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~ 291 (400)
..........++++.|+||+++.++ .||++.+ +++++.+........ .........++..+++. + .+..
T Consensus 188 ~~~~~~~~~~d~~~~s~sK~~~~~~--gg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~-~~~~ 258 (357)
T 3lws_A 188 KTAAEIAGLFDSIYISFYKGLGGIA--GAILAGP---AAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL---R-KDRM 258 (357)
T ss_dssp CCHHHHHTTSSEEEEESSSTTCCSS--CEEEEEC---HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH---H-TTCH
T ss_pred CChHHHHhcCCEEEEeccccCCCCc--eEEEEcC---HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH---H-HHHH
Confidence 1111111223456889999994232 2999888 788888876543222 11223333334445542 2 2333
Q ss_pred HHHHHHHHHHHHHhccCCCCcc-cCCCCceEEEeeCCCCC-CCHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEecc--
Q 015768 292 KDLVRNREIIREALSPLGEGAV-KGGEGAIYLWARLPEKH-LDDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFGG-- 366 (400)
Q Consensus 292 ~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~~-- 366 (400)
+++.++++++.+.|++++++.+ ..+..++++|++++... .+.+++...| .++||.+.||..+.. ..++|++++.
T Consensus 259 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~g~~~~~~~~~~r~~i~~~~ 337 (357)
T 3lws_A 259 GQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQ-EETGLGFVGYLVDKDGYCSTEISVGDAY 337 (357)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHH-HHHCEESCSCCEECSSEEEEEEEBCTTG
T ss_pred HHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHH-HhcCeEEecccccCCCceEEEEEecchh
Confidence 4467778889999999876666 34556889999987531 1245666666 589999999976652 2389999873
Q ss_pred --CCHHHHHHHHHHHHHHH
Q 015768 367 --LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 367 --~~~~~~~~~~~~l~~~l 383 (400)
.+.+++++++++|.+++
T Consensus 338 ~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 338 GELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp GGSCHHHHHHHHHHHHHHC
T ss_pred hhcCHHHHHHHHHHHHHhc
Confidence 47899999999998875
No 179
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.97 E-value=3.8e-31 Score=253.71 Aligned_cols=337 Identities=14% Similarity=0.099 Sum_probs=232.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHH-H-HHHH---hhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcC-CCCCcEEEeCC
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAM-E-KVKE---LVWDPSISKYGADEGLPELRDALVKKLNQENK-LYKSSVMVTAG 97 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~-~-a~~~---~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~-~~~~~i~~~~g 97 (400)
.+|+.++||+.+. ++++ .+|+++ + ++.+ .+.+.. .|+ .....+...++++.+.+.++ ..+++|++++|
T Consensus 51 ~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~--~~~-~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~ 127 (449)
T 2cjg_A 51 ITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNK--PSN-SDVYSVAMARFVETFARVLGDPALPHLFFVEG 127 (449)
T ss_dssp TTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCC--CCT-TTCCCHHHHHHHHHHHHHHCCTTCCEEEEESS
T ss_pred CCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcC--CCC-cccCCHHHHHHHHHHHHhcCCCCCCEEEEeCc
Confidence 3467789987765 4454 489999 8 9988 766532 232 12233455666666666655 56789999999
Q ss_pred hHHHHHHHHHHhc---C----------C-CCEEEEeCCCccchhHHH-H--------hcCc-----EEEEeccCCCCCC-
Q 015768 98 ANQAFVNIVLTLC---D----------A-GDSVVMFAPYYFNSYMSF-Q--------MTGV-----THILVGPCSSKTL- 148 (400)
Q Consensus 98 ~t~a~~~~~~~l~---~----------~-gd~vlv~~p~~~~~~~~~-~--------~~g~-----~~~~~~~~~~~~~- 148 (400)
+++|++.++..+. + + ||+|++.+|+|++..... . ..++ .++.+ |.++.+.
T Consensus 128 gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~ 206 (449)
T 2cjg_A 128 GALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDA-PYMRPGLD 206 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECC-CCCCTTCC
T ss_pred hHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEE-cCCCchhh
Confidence 9999999998653 2 2 899999999998865422 1 1222 45555 5543111
Q ss_pred --------CCCHHHHHHhhcc-CCCCeEEEEeCCCCCCc-cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc
Q 015768 149 --------HPDADWLEKTLET-KPTPKLVSVVNPGNPSG-TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC 218 (400)
Q Consensus 149 --------~~~~e~l~~~l~~-~~~~~~v~l~~p~nptG-~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~ 218 (400)
..+++.|++.++. ...+++|+++..+||+| .+++.+++++|.++|++||+++|+||+|.++...+.....
T Consensus 207 ~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~ 286 (449)
T 2cjg_A 207 EPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAY 286 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTH
T ss_pred ccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceee
Confidence 1355668888862 12246666555578999 5899999999999999999999999999977655432111
Q ss_pred c--CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH-----HHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHH
Q 015768 219 V--EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL-----LKVQDNIPICASIISQHLALYSLQTGPEWVTERV 291 (400)
Q Consensus 219 ~--~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 291 (400)
. ....++ .++||++ |+||++.+ +++++.+ .......+++.+++.+.++.++|+...+ +++.
T Consensus 287 ~~~~~~~di--~t~sK~l-----~iG~~~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~ 354 (449)
T 2cjg_A 287 QQLDVAPDI--VAFGKKT-----QVCGVMAG---RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA--EGLF 354 (449)
T ss_dssp HHHTCCCSE--EEECGGG-----SSEEEEEC---GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHH--HTHH
T ss_pred cccCCCceE--EEecCcc-----cEEEEEEC---HHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHh--ccHH
Confidence 1 112223 3788987 68999988 5666542 2223345778899999999988874222 3456
Q ss_pred HHHHHHHHHHHHHhccC----CC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768 292 KDLVRNREIIREALSPL----GE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366 (400)
Q Consensus 292 ~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~ 366 (400)
++++++++++++.|+++ +. +....+. +.++++.++... +..++..+|+ ++||.+.++. ++++|++++.
T Consensus 355 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~~~~~~~l~-~~Gv~v~~~g----~~~iRi~~~~ 427 (449)
T 2cjg_A 355 ERAVQHGKYLRARLDELAADFPAVVLDPRGR-GLMCAFSLPTTA-DRDELIRQLW-QRAVIVLPAG----ADTVRFRPPL 427 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTTSEEEEEE-TTEEEEECSSHH-HHHHHHHHHH-HTTEECEEET----TTEEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEeec-cEEEEEEECChH-HHHHHHHHHH-HCCeEEecCC----CCEEEEECCC
Confidence 67777888888888753 43 3344455 666677886421 3567888887 7899999863 6899998776
Q ss_pred -CCHHHHHHHHHHHHHHHHHH
Q 015768 367 -LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 367 -~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+++++++++++|+++++++
T Consensus 428 ~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 428 TVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp TCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 79999999999999998764
No 180
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.97 E-value=1.8e-29 Score=238.00 Aligned_cols=321 Identities=18% Similarity=0.146 Sum_probs=230.4
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
++++++..+.+.+ ++++++++.+.+..+ .|. +..+..++++.+++++ +. +++++++|+|+|+..++.+
T Consensus 22 ~~~~~l~~~~p~~--~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~----~~--~~~i~~~~gt~al~~~l~~ 90 (391)
T 3dr4_A 22 SDLPRISVAAPRL--DGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYC----GV--KHAIACNNGTTALHLALVA 90 (391)
T ss_dssp ------CCCCCCC--CSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHH----TC--SEEEEESSHHHHHHHHHHH
T ss_pred CCCceeccCCCCC--CHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHH
Confidence 4677888887765 478888888887653 344 5667788999999988 43 3889999999999999999
Q ss_pred h-cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 109 L-CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 109 l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
+ .++||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++ ++|+ ++||||.+.+ ++
T Consensus 91 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~~~~~~--~~v~---~~n~tG~~~~---~~ 161 (391)
T 3dr4_A 91 MGIGPGDEVIVPSLTYIASANSVTYCGATPVLV-DNDPRTFNLDAAKLEALITPRT--KAIM---PVHLYGQICD---MD 161 (391)
T ss_dssp HTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCGGGSGGGCCTTE--EEEC---CBCGGGCCCC---HH
T ss_pred cCCCCcCEEEECCCchHHHHHHHHHCCCEEEEE-ecCccccCcCHHHHHHhcCCCc--eEEE---EECCCCChhh---HH
Confidence 9 8999999999999999999999999999999 8887777889999999987654 7776 5789999999 88
Q ss_pred HHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhccC
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI 264 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~ 264 (400)
+|.++|+++|+++|+|++|+.+.. .+... ....+ +.+.||| |+++ |.+.|+++.++ +++.+++.......
T Consensus 162 ~i~~l~~~~~~~li~D~a~~~g~~~~~~~~-~~~~d--i~~~S~s~~K~l~--~g~gg~~~~~~--~~~~~~~~~~~~~g 234 (391)
T 3dr4_A 162 PILEVARRHNLLVIEDAAEAVGATYRGKKS-GSLGD--CATFSFFGNAIIT--TGEGGMITTND--DDLAAKMRLLRGQG 234 (391)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETTEET-TSSSS--EEEEECBTTSSSC--CBSCEEEEESC--HHHHHHHHHHHBTT
T ss_pred HHHHHHHHcCCEEEEECcccccceECCeee-cccCC--EEEEECCCCCcCC--cCCeEEEEECC--HHHHHHHHHHHhcC
Confidence 899999999999999999985432 22111 11123 5566655 8875 45689988775 66777776554221
Q ss_pred --------------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-------CCceEEE
Q 015768 265 --------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-------EGAIYLW 323 (400)
Q Consensus 265 --------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-------~~~~~~~ 323 (400)
.+..+.+...+....+ +.+++..++.+++++++.+.|+++ ++.+..+ .....++
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 309 (391)
T 3dr4_A 235 MDPNRRYWFPIVGFNYRMTNIQAAIGLAQL----ERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYT 309 (391)
T ss_dssp CCTTSTTCCSSCCCBCBCCHHHHHHHHHHH----HTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEE
T ss_pred CCCCCcccccccccccCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEE
Confidence 1233433333333233 235667777888889999999888 3344333 1123345
Q ss_pred eeCCCC-CCCHHHHHHHHHHhcCeEEeCCCcc---C-----------------CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 324 ARLPEK-HLDDFEVVRWLAHRHGVVVIPGGAC---G-----------------CRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 324 ~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~---~-----------------~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+.++.. ..+.+++...|. ++||.+.++... . ....+|++++. +|++|++.+++.|++
T Consensus 310 i~~~~~~~~~~~~l~~~L~-~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~ 388 (391)
T 3dr4_A 310 VRLGEGLSTTRDQVIKDLD-ALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQ 388 (391)
T ss_dssp EEECSSCSSCHHHHHHHHH-HTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHT
T ss_pred EEECCccchhHHHHHHHHH-HCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 666541 236788888875 789999987521 0 13579999887 899999999999887
Q ss_pred HH
Q 015768 382 GL 383 (400)
Q Consensus 382 ~l 383 (400)
++
T Consensus 389 ~l 390 (391)
T 3dr4_A 389 VL 390 (391)
T ss_dssp TC
T ss_pred Hh
Confidence 54
No 181
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.97 E-value=1.4e-30 Score=250.29 Aligned_cols=331 Identities=13% Similarity=0.101 Sum_probs=223.9
Q ss_pred cCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHH
Q 015768 28 GAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVN 104 (400)
Q Consensus 28 ~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~ 104 (400)
+++.++||+.+. ++++ .+|++++++.+.+.+.. .|+ +..++++++++++.+.++ .++++++++|+++|+..
T Consensus 55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~ 128 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLL 128 (453)
T ss_dssp TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHH
T ss_pred CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHH
Confidence 457789998886 3343 68999999999987642 232 356889999999988876 67899999999999999
Q ss_pred HHHH---hcCCCCEEEEeCCCccchhHHHHh-----------cCcE------EEEeccCCCCCCCCCHHHHHHhhccC-C
Q 015768 105 IVLT---LCDAGDSVVMFAPYYFNSYMSFQM-----------TGVT------HILVGPCSSKTLHPDADWLEKTLETK-P 163 (400)
Q Consensus 105 ~~~~---l~~~gd~vlv~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~~~e~l~~~l~~~-~ 163 (400)
++++ +.++ +.|++.+|+|+++...... .|+. +..+ |. .|++.+++.++.. .
T Consensus 129 al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~~~~~ 200 (453)
T 2cy8_A 129 ALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLI-RP------DDIEGMREVFANHGS 200 (453)
T ss_dssp HHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEE-CT------TCHHHHHHHHHHHGG
T ss_pred HHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeec-CC------CCHHHHHHHHHhcCC
Confidence 9998 5554 6888899999876543321 1321 2333 22 2889999988731 1
Q ss_pred CCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccCCCcce
Q 015768 164 TPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYGMMGWR 240 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g~~g~~ 240 (400)
.+++|+++..+|++|.+ .+.+++++|.++|++||+++|+||+|+++ ..+..... .....+ +.|+||+++ +|+|
T Consensus 201 ~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d--i~s~sK~l~-~G~~ 276 (453)
T 2cy8_A 201 DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPD--LTCLAKASA-GGLP 276 (453)
T ss_dssp GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCS--EEEEEGGGG-TTSS
T ss_pred CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCc--EEEEChhhh-CCcc
Confidence 23666555445779975 57999999999999999999999999977 43322111 111122 348899998 6899
Q ss_pred eEEEEccCCcHHHHHHHHH-----hhccCCcCccHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccC----CC
Q 015768 241 VGYIAYPSEVEGFATQLLK-----VQDNIPICASIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL----GE 310 (400)
Q Consensus 241 ~G~i~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~----~~ 310 (400)
+||++++ +++++.+.. .....+++.+++++.++.++|+. . .++..++++++++++++.|+++ +.
T Consensus 277 ~G~v~~~---~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 350 (453)
T 2cy8_A 277 GGILGGR---EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL---EDDVCAKINDLGQFAREAMNHLFARKGL 350 (453)
T ss_dssp CEEEEEC---HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEech---HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999998 677776644 11234677889999888888864 2 1345566677777777777653 44
Q ss_pred CcccCCCCceEEEeeCCC-----C-------------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHH
Q 015768 311 GAVKGGEGAIYLWARLPE-----K-------------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDC 372 (400)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~ 372 (400)
.....+. +.++|+.++. . ..+..++..+|+ ++||.+.|+ +.+|+++. .+++++
T Consensus 351 ~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~l~~~-~t~~~i 421 (453)
T 2cy8_A 351 NWLAYGR-FSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVFLSAQ-HEREHV 421 (453)
T ss_dssp CEEEECC-TTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEECCTT-CCHHHH
T ss_pred cEEEEEe-eeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEEeecc-CCHHHH
Confidence 3334444 6788888864 1 011456887776 689999653 23677654 699999
Q ss_pred HHHHHHHHHHHHHHhccCc
Q 015768 373 KAAADRLRRGLEELVKDGM 391 (400)
Q Consensus 373 ~~~~~~l~~~l~~~~~~~~ 391 (400)
++++++|+++++++.+.+.
T Consensus 422 ~~~l~~l~~~l~~~~~~~~ 440 (453)
T 2cy8_A 422 EHLVTTFDRVLDRLADENL 440 (453)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 9999999999998876544
No 182
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.97 E-value=3.4e-29 Score=235.80 Aligned_cols=284 Identities=18% Similarity=0.112 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCC
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT 147 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~ 147 (400)
...+.+++.+++..|. +++++++|+++|++.++.++.++||+|+++.|+|+++...+ +..|++++.+ +.+
T Consensus 66 ~~~~~l~~~la~~~g~--~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~~--- 139 (392)
T 3qhx_A 66 PTRTALEAALAAVEDA--AFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV-ALA--- 139 (392)
T ss_dssp HHHHHHHHHHHHHTTC--SEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE-CTT---
T ss_pred hHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe-CCC---
Confidence 3344555555555564 47899999999999999999999999999999999887766 6679999988 654
Q ss_pred CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|++||+++|+|++|+.+.... ....+.++++
T Consensus 140 ---d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~----~~~~~~di~~ 207 (392)
T 3qhx_A 140 ---DLDAVRAAIRPTT--RLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ----PLSLGADVVL 207 (392)
T ss_dssp ---CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GGGGTCSEEE
T ss_pred ---CHHHHHHhhCCCC--eEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC----hHHhCCcEEE
Confidence 7899999998765 99999999999999999 9999999999999999999998543221 1233567999
Q ss_pred eccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhc
Q 015768 228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALS 306 (400)
Q Consensus 228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 306 (400)
.|+||.+|.+| +++||++.++ +++.+.+.......+.+.++...+++...++. +..+.+++.++++.+.+.|+
T Consensus 208 ~S~sK~lg~~g~~~~G~v~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~~~~~~~~~~~~l~~~L~ 281 (392)
T 3qhx_A 208 HSTTKYIGGHSDVVGGALVTND--EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT----LVLRMQRHSENAAAVAEFLA 281 (392)
T ss_dssp EETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHH
T ss_pred EcCccccCCCCCceEEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHHHHHHHh
Confidence 99999998666 7899999885 67888887776656777888888888877765 45566777888888888888
Q ss_pred cCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC--------------
Q 015768 307 PLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-------------- 355 (400)
Q Consensus 307 ~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-------------- 355 (400)
+++.+. +..| ..+.++++.++......+.+...+ +..++.+..|..+.
T Consensus 282 ~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~~~~~~~~~~~ 360 (392)
T 3qhx_A 282 EHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKT-NIFILAESLGSVESLIEHPSAMTHASTA 360 (392)
T ss_dssp TCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHC-SSSEECSCCCCSSCEEECGGGTSCGGGB
T ss_pred cCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhC-CCceECCCCCCCCceeeCcccccccccC
Confidence 776532 2111 125577888875222344555544 35677777776532
Q ss_pred ------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 356 ------CRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 356 ------~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
.++.+|||++. ++.++.++.|.+++
T Consensus 361 ~~~~g~~~~~iRlSvg~---e~~~~~i~~l~~al 391 (392)
T 3qhx_A 361 GSQLEVPDDLVRLSVGI---EDVADLLDDLKQAL 391 (392)
T ss_dssp TTBCCCCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred HHHcCCCCCeEEEEecc---CCHHHHHHHHHHHh
Confidence 25679999997 44555666666654
No 183
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.97 E-value=2.4e-30 Score=247.47 Aligned_cols=333 Identities=16% Similarity=0.123 Sum_probs=230.0
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. +.++ .+|++++++.+.+.+.....| ..+.++++++++.+.++ ..+++++++|+++|+.
T Consensus 53 ~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~ 126 (434)
T 2epj_A 53 VDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGA-----PGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATM 126 (434)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHH
T ss_pred CCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence 3567899998886 3444 689999999999877422222 34455666676666664 4789999999999999
Q ss_pred HHHHH---hcCCCCEEEEeCCCccchhHHHH--------------hcCc------EEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 104 NIVLT---LCDAGDSVVMFAPYYFNSYMSFQ--------------MTGV------THILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 104 ~~~~~---l~~~gd~vlv~~p~~~~~~~~~~--------------~~g~------~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
.++++ +. +++.|++.+|+|++...... ..|+ .++.+ |. .|++.+++.++
T Consensus 127 ~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~ 198 (434)
T 2epj_A 127 TAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVT-PY------NDVEALERVFA 198 (434)
T ss_dssp HHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEE-ET------TCHHHHHHHHH
T ss_pred HHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEec-CC------CCHHHHHHHHH
Confidence 99987 44 45788888999988554221 1132 23444 32 27899999887
Q ss_pred cC-CCCeEEEEeCCCCCCccCC-CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc
Q 015768 161 TK-PTPKLVSVVNPGNPSGTYI-PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG 238 (400)
Q Consensus 161 ~~-~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g 238 (400)
.. ..+++|+++..++++|.+. +.+++++|.++|++||+++|+||+|+++.. +........+....+.|+||.+| +|
T Consensus 199 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~-g~~~~~~~~~~~~di~s~sK~l~-~G 276 (434)
T 2epj_A 199 EYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRL-GLEGAQGYFNIEGDIIVLGKIIG-GG 276 (434)
T ss_dssp HHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTS-STTHHHHHHTCCCSEEEEEGGGG-TT
T ss_pred hCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeC-CcchhhHHhCCCCCeeeecchhc-CC
Confidence 31 1236665555567899865 799999999999999999999999997632 32111100011111348899998 58
Q ss_pred ceeEEEEccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCC
Q 015768 239 WRVGYIAYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEG 311 (400)
Q Consensus 239 ~~~G~i~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~ 311 (400)
+|+||++++ +++++.+... ....+++.+++.+.++.++|+...+ ++..++++++++++++.|+++ +..
T Consensus 277 ~~~G~v~~~---~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 351 (434)
T 2epj_A 277 FPVGAVAGS---REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE--EPVYSVSREAAKALEEAASEVLDRTGLP 351 (434)
T ss_dssp SSCEEEEEC---HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cceeeeeec---HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 999999998 7777766542 1234677889999888888874211 345666777777777777664 442
Q ss_pred cccCCCCceEEEeeCCCCC------------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHH
Q 015768 312 AVKGGEGAIYLWARLPEKH------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRL 379 (400)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l 379 (400)
....+. +.++|+.++... .+..++..+|+ ++||.+.++. ...+|+++. .+++++++++++|
T Consensus 352 ~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~e~i~~~l~~l 424 (434)
T 2epj_A 352 YTINRV-ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSN----LEAVFTGLP-HQGEALEIAVEGL 424 (434)
T ss_dssp EEEEEE-TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSST----TSCEECCTT-CSHHHHHHHHHHH
T ss_pred EEEEEe-eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccC----CCcEEEecc-CCHHHHHHHHHHH
Confidence 223343 678888876410 12456777776 7899999875 235677655 5999999999999
Q ss_pred HHHHHHHh
Q 015768 380 RRGLEELV 387 (400)
Q Consensus 380 ~~~l~~~~ 387 (400)
+++++++.
T Consensus 425 ~~~l~~~~ 432 (434)
T 2epj_A 425 RSSLKTVL 432 (434)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998763
No 184
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.97 E-value=4.3e-29 Score=233.69 Aligned_cols=326 Identities=14% Similarity=0.144 Sum_probs=233.7
Q ss_pred CCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHH-HHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCC
Q 015768 36 AQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDAL-VKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAG 113 (400)
Q Consensus 36 ~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~-a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~g 113 (400)
..+.+++++++++++++.+.+.++....| .....++++++ ++++ | ..+++++++|+|+|+..++.++ .+||
T Consensus 6 ~~~~p~~~~~~~i~~a~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~----g-~~~~~v~~~sgt~al~~al~~l~~~~G 78 (377)
T 3ju7_A 6 PFLRASTVPVIEYLDELKEIDASHIYTNY--GPINQRFEQTIMSGFF----Q-NRGAVTTVANATLGLMAAIQLKKRKKG 78 (377)
T ss_dssp CSCCCCCCCGGGGHHHHHHHHHHTCCSSS--CHHHHHHHHHHHHHTS----T-TCSEEEEESCHHHHHHHHHHHHSCTTC
T ss_pred eccCCCCCCcHHHHHHHHHHHHcCCcccC--CHHHHHHHHHHHHHHh----C-CCCeEEEeCCHHHHHHHHHHHcCCCCc
Confidence 34568888899999999999886542223 33467778887 7776 5 2577899999999999999998 8999
Q ss_pred CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhh-ccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHH
Q 015768 114 DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTL-ETKPTPKLVSVVNPGNPSGTYIPERLLKRISDL 192 (400)
Q Consensus 114 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l-~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l 192 (400)
|+|+++.|+|.++...++..|++++++ +.+++++.+|++++++.+ +++..+++|+ |+||+|...+ +++|.++
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~G~~~~~v-~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~l 151 (377)
T 3ju7_A 79 KYALMPSFTFPATPLAAIWCGLEPYFI-DISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEEL 151 (377)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEE-ecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHH
Confidence 999999999999999999999999999 888777889999999988 5551137776 6789999999 8888999
Q ss_pred HHHcCCEEEEcccccccccCCCCcc-ccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhcc--------
Q 015768 193 CKAAGSWLVVDNTYEYFMYDGRKHC-CVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN-------- 263 (400)
Q Consensus 193 ~~~~~~~li~D~a~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~-------- 263 (400)
|+ ||+++|+|++|+.+........ ....+..++..+.+|.++ +| +.|+++.++ +++.++++..+..
T Consensus 152 a~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~-~g-~gG~~~~~~--~~l~~~~~~~~~~g~~~~~~~ 226 (377)
T 3ju7_A 152 EK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFG-IG-EGGLIYSKN--EEDIQRIKRMGNFGFDTNREC 226 (377)
T ss_dssp HH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSC-CB-SCEEEEESC--HHHHHHHHHHTBTTBCTTSCB
T ss_pred Hh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCC-CC-CcEEEEECC--HHHHHHHHHHHhcCCCCCCce
Confidence 99 9999999999985543111111 111233444444579997 34 678888776 7888888776542
Q ss_pred ----CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCC--cccCCC--C--ceEEEeeCCCCCCCH
Q 015768 264 ----IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEG--AVKGGE--G--AIYLWARLPEKHLDD 333 (400)
Q Consensus 264 ----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~~~--~--~~~~~~~~~~~~~~~ 333 (400)
..+.++.+....+...++. ++.+.++.+++++++.+.|++++.+ .+.... . ..++.+.++.. .+.
T Consensus 227 ~~~g~~~~~~~~~aa~~~~~l~~----l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 301 (377)
T 3ju7_A 227 TMMGFNCKMSEYAAAIGIATMKK----WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEE-VRN 301 (377)
T ss_dssp CSSCCBCCCCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTT-SCH
T ss_pred eeccccCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCCh-hhH
Confidence 2344566666655556643 5677777888888888888887642 121111 1 12344566542 247
Q ss_pred HHHHHHHHHhcCeEEeCCC--ccCC-------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 334 FEVVRWLAHRHGVVVIPGG--ACGC-------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 334 ~~~~~~l~~~~gi~v~~g~--~~~~-------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
+++...|. ++||.+..+. .++. .+.+|+.++. ++++|++..++.|++++.+.
T Consensus 302 ~~l~~~L~-~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 302 KQVIEDLK-KQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVSA 375 (377)
T ss_dssp HHHHHHHH-TTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC-----
T ss_pred HHHHHHHH-HCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence 78888775 8899998765 2210 2479999887 89999999999998887653
No 185
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.97 E-value=7.8e-29 Score=234.14 Aligned_cols=281 Identities=17% Similarity=0.172 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCC
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT 147 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~ 147 (400)
...+++++.+++.+|.+ +.++++++++|+..++.++.++||+|+++.|+|+++...+ +..|++++.+ +.+
T Consensus 65 ~~~~~l~~~la~~~g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~--- 138 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV-DMA--- 138 (398)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE-CTT---
T ss_pred hHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE-CCC---
Confidence 34444445555445654 5666777789999999999999999999999999988776 6678998888 643
Q ss_pred CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|++||+++|+|++|..+..... ...+.++++
T Consensus 139 ---d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~~----~~~~~d~~~ 206 (398)
T 1gc0_A 139 ---DLQALEAAMTPAT--RVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQRP----LELGADLVV 206 (398)
T ss_dssp ---CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCCG----GGGTCSEEE
T ss_pred ---CHHHHHHhcCCCC--eEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCCc----hhhCceEEE
Confidence 7899999998654 99999999999999999 99999999999999999999997765321 123567999
Q ss_pred eccccccCCCccee-EEEEccCCcHHHHH-HHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMGWRV-GYIAYPSEVEGFAT-QLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 228 ~s~sK~~g~~g~~~-G~i~~~~~~~~~~~-~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (400)
.|+||++|.+|.|+ ||++.+ ++.++ .+...... .+.+.+++.++++...++. +..+.++..++.+.+.+.
T Consensus 207 ~S~sK~~~~~~~~~~G~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~~~ 279 (398)
T 1gc0_A 207 HSATKYLSGHGDITAGIVVGS---QALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT----LNLRMDRHCANAQVLAEF 279 (398)
T ss_dssp EETTTTTTCSSSCCCEEEEEC---HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHH
T ss_pred ECCccccCCCCCCeEEEEEEC---hHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch----HHHHHHHHHHHHHHHHHH
Confidence 99999998888887 999988 55544 55554444 4566788888887777764 455666777777778777
Q ss_pred hccCCCC--------------cccCC---CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC---CCc------c----
Q 015768 305 LSPLGEG--------------AVKGG---EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GGA------C---- 354 (400)
Q Consensus 305 L~~~~~~--------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~---g~~------~---- 354 (400)
|++++.+ .+..+ ..+.++.+.++. ..+....++++.++.+.. |+. +
T Consensus 280 L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~ 355 (398)
T 1gc0_A 280 LARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG----GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMT 355 (398)
T ss_dssp HHTCTTEEEEEEC----------------CCTTEEEEEETT----HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTT
T ss_pred HhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC----CHHHHHHHHHhCCCceeccCCCCcceeeecccccc
Confidence 7765431 11111 125566667753 223344455678888765 422 1
Q ss_pred ------------C-CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 355 ------------G-CRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 355 ------------~-~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+ .++.+|||++. .++++++.+.+.|++
T Consensus 356 ~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 356 HSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp TSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 1 14799999998 556666666655554
No 186
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.97 E-value=4.9e-29 Score=236.93 Aligned_cols=285 Identities=19% Similarity=0.177 Sum_probs=205.7
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCCCCC
Q 015768 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSSKTL 148 (400)
Q Consensus 73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~ 148 (400)
..+++++.+++.+|.+ +.++++++++|++.++.++.++||+|+++.++|+++... ++..|++++.+ +.+
T Consensus 115 ~~~~l~~~lA~l~g~~--~~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~---- 187 (445)
T 1qgn_A 115 TTVVLEEKISALEGAE--STLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVI-DPA---- 187 (445)
T ss_dssp HHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CSS----
T ss_pred HHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-CCC----
Confidence 3344444444444654 445555556999999999999999999999999887764 45679999988 653
Q ss_pred CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEe
Q 015768 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLF 228 (400)
Q Consensus 149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~ 228 (400)
|++.+++.+++++ +++|++++|+||+|.+.| +++|.++|++||+++|+|++|..+.... ....+.++++.
T Consensus 188 --d~~~l~~ai~~~t-v~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~~----~~~~g~Div~~ 257 (445)
T 1qgn_A 188 --DVGALELALNQKK-VNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQK----ALALGADLVLH 257 (445)
T ss_dssp --CHHHHHHHHHHSC-EEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----TTTTTCSEEEE
T ss_pred --CHHHHHHHhccCC-CCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----ccccCCEEEEE
Confidence 7899999998653 589999999999999999 8899999999999999999998553321 22345679999
Q ss_pred ccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc
Q 015768 229 SFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP 307 (400)
Q Consensus 229 s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (400)
|+||.+|..| .++||++.+ +++++++...........+++..+.+...++. +..+.+++.++++++.+.|++
T Consensus 258 S~sK~~gg~gd~~~G~l~~~---~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~----l~~r~~~~~~~a~~l~~~L~~ 330 (445)
T 1qgn_A 258 SATKFLGGHNDVLAGCISGP---LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT----LHLRVQQQNSTALRMAEILEA 330 (445)
T ss_dssp CTTTTTTCSSSCCCEEEEEC---HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcccccccccceEEEEEEC---HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHHHhc
Confidence 9999997444 469999998 78888776655433444566665655566654 456667777888889999988
Q ss_pred CCCC-cccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC---------------
Q 015768 308 LGEG-AVKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG--------------- 355 (400)
Q Consensus 308 ~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~--------------- 355 (400)
++.+ .+..| ..+.++++.++....+...+...+ +..++.+..|..|.
T Consensus 331 ~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l-~~~~i~~s~G~~~sl~~~p~~~~h~~~~~ 409 (445)
T 1qgn_A 331 HPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDAL-KIPYIAPSFGGCESIVDQPAIMSYWDLSQ 409 (445)
T ss_dssp CTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHC-SSSEECSCCCSSSCEEECHHHHHSTTSCH
T ss_pred CCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhC-CCceEeccCCCCceeeecccccccccCCH
Confidence 7654 33322 135677788864211133444433 23477777776542
Q ss_pred --------CCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 356 --------CRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 356 --------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.++.+|||++. ||++++++.|+++++.
T Consensus 410 ~~~~~~g~~~~~iRlSvG~---Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 410 SDRAKYGIMDNLVRFSFGV---EDFDDLKADILQALDS 444 (445)
T ss_dssp HHHHTTTCCSSEEEEECCS---SCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHHHhh
Confidence 14789999995 6788999999998864
No 187
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.97 E-value=3.3e-29 Score=239.14 Aligned_cols=339 Identities=13% Similarity=0.060 Sum_probs=217.5
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. +.++ .+|++++++.+.+.+.....| + .+...++++.+.+.++ .++++++++|+++|++
T Consensus 50 ~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~----~~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~ 123 (429)
T 4e77_A 50 VDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGA-P----TEMEVKMAQLVTDLVP-TMDMVRMVNSGTEATM 123 (429)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSS-C----CHHHHHHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCC-C----CHHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHH
Confidence 4578899999886 3454 689999999999887432223 2 2455666677766665 5789999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHH-hcCcEE--EEeccCCCCCC------------CCCHHHHHHhhccCCCCe
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ-MTGVTH--ILVGPCSSKTL------------HPDADWLEKTLETKPTPK 166 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~~~--~~~~~~~~~~~------------~~~~e~l~~~l~~~~~~~ 166 (400)
.+++... .+++.|++..++|++...... ..+... ... |.. .+. ..|++++++.++......
T Consensus 124 ~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 4e77_A 124 SAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQ-PNS-PGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV 201 (429)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCC-------------------CCC-TTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCC-CCc-CCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence 9998654 356899999999988765221 111110 001 110 000 117899999987422124
Q ss_pred EEEEeCCCCC-CccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEE
Q 015768 167 LVSVVNPGNP-SGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYI 244 (400)
Q Consensus 167 ~v~l~~p~np-tG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i 244 (400)
++++++|+|+ +|.+ .+.+++++|.++|++||+++|+||+|.++ ..+........+....+.|+||.+| +|+|+||+
T Consensus 202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~-~G~~~G~~ 279 (429)
T 4e77_A 202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIG-GGMPVGAF 279 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGG-TTSCCEEE
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeeccccc-CCCCeEEE
Confidence 4445556544 4544 45677999999999999999999999977 4332221111111112348899998 79999999
Q ss_pred EccCCcHHHHHHHHHh---hccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCc
Q 015768 245 AYPSEVEGFATQLLKV---QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGA 319 (400)
Q Consensus 245 ~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 319 (400)
+.+ +++++.+... ....+++.+++.+.++.++|+.. ++..++..+.....++.|.+.+..++......+ .+
T Consensus 280 ~~~---~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~g 355 (429)
T 4e77_A 280 GGR---REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNH-VG 355 (429)
T ss_dssp EEC---HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEE-ET
T ss_pred EEC---HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEE-ee
Confidence 998 7887776542 23456788999999998888731 223333333333334444444444454333333 37
Q ss_pred eEEEeeCCCCC-------------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPEKH-------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 320 ~~~~~~~~~~~-------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~ 385 (400)
.++++.++... ....+++..|+ ++||.+.++. ...+|+++. .+++++++++++|++++++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----~~~~~~~~~-~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 356 GMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSA----FEAGFMSLA-HSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp TEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSST----TSCEECCTT-CCHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecC----CCCEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 78888886531 01267777776 7899999864 345676655 5999999999999998864
No 188
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=3.3e-28 Score=228.99 Aligned_cols=285 Identities=22% Similarity=0.197 Sum_probs=208.0
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccC
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPC 143 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~ 143 (400)
.+..++++.+++++ +.+ +.+++ +++++|+..++.++.++||+|+++.|+|++....+ +..|++++.+ +.
T Consensus 52 ~~~~~l~~~la~~~----~~~-~~i~~-~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~ 124 (386)
T 1cs1_A 52 PTRDVVQRALAELE----GGA-GAVLT-NTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFV-DQ 124 (386)
T ss_dssp HHHHHHHHHHHHHH----TCS-EEEEE-SSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEE-CT
T ss_pred ccHHHHHHHHHHHh----CCC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEe-CC
Confidence 44567777777776 544 55555 45599999999999999999999999998866543 6678898888 65
Q ss_pred CCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCc
Q 015768 144 SSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDH 223 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~ 223 (400)
+ |++.+++.+++++ ++|++++|+||||.+++ +++|.++|++||+++|+|++|..+.... + ...+.
T Consensus 125 ~------d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~-~---~~~~~ 189 (386)
T 1cs1_A 125 G------DEQALRAALAEKP--KLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN-P---LALGA 189 (386)
T ss_dssp T------CHHHHHHHHHTCC--SEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC-G---GGGTC
T ss_pred C------CHHHHHHhhccCC--cEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC-c---cccCc
Confidence 3 7899999998655 99999999999999999 8999999999999999999999776532 1 13457
Q ss_pred EEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 224 VVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 224 ~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
++++.|+||+++.+|.++ ||++.++ +++++.+.......+.+.+++.+.++...++. +....+...++.+.+.
T Consensus 190 di~~~s~sK~~~~~~~~~~G~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~l~ 263 (386)
T 1cs1_A 190 DLVLHSCTKYLNGHSDVVAGVVIAKD--PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRMELAQRNAQAIV 263 (386)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred eEEEEcCcccccCCCCceeEEEEeCc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH----HHHHHHHHHHHHHHHH
Confidence 799999999998788886 9999884 47888887666544556777777776666653 4556666777788888
Q ss_pred HHhccCCCCccc-C----------------CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----------
Q 015768 303 EALSPLGEGAVK-G----------------GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----------- 354 (400)
Q Consensus 303 ~~L~~~~~~~~~-~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----------- 354 (400)
+.|++++.+... . ...+.++.+.++. ..+.+...+ +++||.+.+....
T Consensus 264 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l-~~~gi~~~~~~~g~~~sl~~~~~~ 339 (386)
T 1cs1_A 264 KYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG---DEQTLRRFL-GGLSLFTLAESLGGVESLISHAAT 339 (386)
T ss_dssp HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS---CHHHHHHHH-HTCSSSEEBSCCCSSSCEEEEGGG
T ss_pred HHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC---CHHHHHHHH-HhCCcceEcccCCCcceeeecccc
Confidence 888776432110 0 1125556566653 245566555 5899998742110
Q ss_pred --------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 355 --------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 355 --------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+ .++++||+++. ++.++.+++|.++++++.
T Consensus 340 ~~~~~~~~~~~~~~g~~~~~iRis~~~---~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 340 MTHAGMAPEARAAAGISETLLRISTGI---EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp TTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHT
T ss_pred cccccCCHHHHHhcCCCCCeEEEEEcc---CCHHHHHHHHHHHHHHhh
Confidence 1 25799999997 445566667777776654
No 189
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.97 E-value=7.3e-29 Score=237.51 Aligned_cols=363 Identities=15% Similarity=0.111 Sum_probs=240.0
Q ss_pred HhhhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCC------CCCCcHHHHHHHHHHHHh
Q 015768 10 RALETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYG------ADEGLPELRDALVKKLNQ 83 (400)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~~~~~~a~~l~~ 83 (400)
++...+...+..+.+..+.+.+.+.|-.+.+. +++.|++++.+.+.+....+|+ .......+++...+++++
T Consensus 34 ~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~ 111 (490)
T 2a7v_A 34 SLSDSDPEMWELLQREKDRQCRGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CHHHHCHHHHHHHHHHHHHHHHSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred hhhhcCHHHHHHHHHHHHHHHcCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence 34455566677777777666778888876555 5899999999988654322332 222345677777788888
Q ss_pred hcCCCCCc---EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH--------HHHhcCc--EEEEeccCCCCCCCC
Q 015768 84 ENKLYKSS---VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM--------SFQMTGV--THILVGPCSSKTLHP 150 (400)
Q Consensus 84 ~~~~~~~~---i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~ 150 (400)
.+|.+.+. .++++++|+|+..++.++++|||+|++..+.|.++.. .+...|. .++.+ +++++++.+
T Consensus 112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~-~vd~~~~~i 190 (490)
T 2a7v_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLI 190 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------C-CBCTTTCSB
T ss_pred HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEec-ccccccCCc
Confidence 88987653 3556688999999999999999999999999866431 2234454 34455 556555689
Q ss_pred CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-ccCCCCccccCCCcEEEEec
Q 015768 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF-MYDGRKHCCVEGDHVVNLFS 229 (400)
Q Consensus 151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~-~~~~~~~~~~~~~~~i~~~s 229 (400)
|++++++.+.... +|+|+++.++|| ...+ +++|.++|++||+++++|++|... ...+...... ...+++++|
T Consensus 191 D~d~le~~l~~~~-~klIi~~~s~~~--~~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~-~~aDiv~~S 263 (490)
T 2a7v_A 191 DYNQLALTARLFR-PRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-KHADIVTTT 263 (490)
T ss_dssp CHHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG-GTCSEEEEE
T ss_pred CHHHHHHHHhhcC-CcEEEEcCCCCC--Cccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCC-CCCCEEEEC
Confidence 9999999987422 488888877876 4667 899999999999999999998633 2333222222 245689999
Q ss_pred cccccCCCcceeEEEEccCCcH------------HHHHHHHHhhccCC-cCccHHHHHHHHHHhcCC-cHHHHHHHHHHH
Q 015768 230 FSKAYGMMGWRVGYIAYPSEVE------------GFATQLLKVQDNIP-ICASIISQHLALYSLQTG-PEWVTERVKDLV 295 (400)
Q Consensus 230 ~sK~~g~~g~~~G~i~~~~~~~------------~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~ 295 (400)
+||+++ |.+.|++++++... ++.++++....... .+++.....++..++... .+.++++.+++.
T Consensus 264 ~hK~l~--Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~ 341 (490)
T 2a7v_A 264 THKTLR--GARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVL 341 (490)
T ss_dssp SSGGGC--SCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CcccCc--cccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 999984 56779999885310 35566665543322 234444455545455432 234578888999
Q ss_pred HHHHHHHHHhccCCCCccc-CCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC-----CCCeEEEEecc---
Q 015768 296 RNREIIREALSPLGEGAVK-GGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG-----CRGHLRISFGG--- 366 (400)
Q Consensus 296 ~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~--- 366 (400)
++++++++.|++.+. .+. ++...+++|+.+.....+..++...| ++.||.+..+..++ .+..||++...
T Consensus 342 ~na~~L~~~L~~~G~-~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L-~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~ 419 (490)
T 2a7v_A 342 KNARAMADALLERGY-SLVSGGTDNHLVLVDLRPKGLDGARAERVL-ELVSITANKNTCPGDRSAITPGGLRLGAPALTS 419 (490)
T ss_dssp HHHHHHHHHHHHTTC-EEGGGSCSSSEEEEECTTTTCCHHHHHHHH-HHTTEECEEECCTTCCCSSSCSEEEEESHHHHH
T ss_pred HHHHHHHHHHHHcCc-EEecCCCCCeEEEEEeCCCCCCHHHHHHHH-HhCCeEEecCccCCCCCCCCCCceEeccccccc
Confidence 999999999999865 544 33346788889876545677777655 58999998544332 35789997532
Q ss_pred --CCHHHHHHHHHHHHHHHHHH
Q 015768 367 --LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 367 --~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+++|++++++.|.+++...
T Consensus 420 ~g~~~~d~~~~~~~i~~~l~~~ 441 (490)
T 2a7v_A 420 RQFREDDFRRVVDFIDEGVNIG 441 (490)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhh
Confidence 58899999999999998754
No 190
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.97 E-value=4e-29 Score=236.23 Aligned_cols=325 Identities=11% Similarity=0.030 Sum_probs=222.2
Q ss_pred CeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEE-eCChHHHHHHHHHH
Q 015768 31 NAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMV-TAGANQAFVNIVLT 108 (400)
Q Consensus 31 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~-~~g~t~a~~~~~~~ 108 (400)
+.++|+.+ +.++|+++++++.+... .....+.......++.+++.+++++.+|++ ++++++ |+|+|++++.++.+
T Consensus 40 ~~~~~~~~--~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~ 116 (398)
T 2fyf_A 40 RDGRFGSG--PSKVRLEQLQTLTTTAA-ALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFG 116 (398)
T ss_dssp SSCBCCSS--SCCCCHHHHHGGGTTTT-TTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHH
T ss_pred CCccccCC--CCCCCHHHHHHHhhcCC-CccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHH
Confidence 44555543 33578899998876321 111100111122345677777777777887 468998 99999999999999
Q ss_pred hcCCCCEEEEeCCCccc-hhHHHHhc--CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHH
Q 015768 109 LCDAGDSVVMFAPYYFN-SYMSFQMT--GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERL 185 (400)
Q Consensus 109 l~~~gd~vlv~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~ 185 (400)
+.++| .+++..+.|.. ....+... |.+++.+ +.+ ++...+. .++++ +++|++++|+||||.++|.++
T Consensus 117 l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v-~~~-~g~~~~~-----~i~~~--~~~v~~~~~~nptG~~~~~~~ 186 (398)
T 2fyf_A 117 LIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIII-TSD-PGSAPEP-----QTDPS--VDVIAWAHNETSTGVAVAVRR 186 (398)
T ss_dssp TCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEE-ECC-TTCCCCC-----CCCTT--CSEEEEESEETTTTEECCCCC
T ss_pred hcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEE-ecC-CCCCCCc-----cccCC--CCEEEEeCcCCCcceecchHH
Confidence 99887 23334444421 12234555 7788888 776 4443332 14444 499999999999999999555
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhh----
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ---- 261 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~---- 261 (400)
+.++ +|+++|+|++|+.+... ... . +.+++++|+||++|++| ++||++.+ +++++++....
T Consensus 187 i~~~------~~~~vivD~a~~~~~~~---~~~-~-~~di~~~s~sK~~~~~g-g~g~l~~~---~~~~~~l~~~~~~~~ 251 (398)
T 2fyf_A 187 PEGS------DDALVVIDATSGAGGLP---VDI-A-ETDAYYFAPQKNFASDG-GLWLAIMS---PAALSRIEAIAATGR 251 (398)
T ss_dssp CTTC------C-CEEEEECTTTTTTSC---CCG-G-GCSEEEECTTSTTCSCS-SEEEEEEC---HHHHHHHHHHHHTTC
T ss_pred hhhh------cCCeEEEEeccccCCcc---cCc-c-cCcEEEEecCcccCCCC-ceEEEEEC---HHHHHHhhcccccCC
Confidence 5443 89999999999865422 111 1 25688999999998664 58999988 67777664321
Q ss_pred -----------------ccCCcCccHHHHHHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHHhccCCCCcccC--C--CC
Q 015768 262 -----------------DNIPICASIISQHLALYSLQTGPEW--VTERVKDLVRNREIIREALSPLGEGAVKG--G--EG 318 (400)
Q Consensus 262 -----------------~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~--~~ 318 (400)
.....+++...+.++..+++...+. +++..++++++++++.+.|++++++.+.. + .+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 331 (398)
T 2fyf_A 252 WVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRS 331 (398)
T ss_dssp CCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBC
T ss_pred CCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcC
Confidence 1223456777777777777642232 67788889999999999999885545552 3 33
Q ss_pred ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 319 AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
+.+++++++.. .+..++..+|. ++||.+.+|.....++++||+++. ++++++++++++|++++++
T Consensus 332 ~~~~~~~~~~~-~~~~~l~~~L~-~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 332 QVVGTIDFVDD-VDAGTVAKILR-ANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp SSEEEEEECTT-SCHHHHHHHHH-HTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEECCCC-CCHHHHHHHHH-HCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 45889988653 36788888886 669999987433336799999996 7999999999999998764
No 191
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.97 E-value=8.8e-29 Score=228.01 Aligned_cols=276 Identities=18% Similarity=0.107 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCC
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKT 147 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~ 147 (400)
++++.+++++ |.+ +.++++++++|+..++.++.++||+|+++.|+|+++...+ +..|++++.+ +.
T Consensus 2 ~l~~~la~~~----g~~--~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~---- 70 (331)
T 1pff_A 2 ALEGKIAKLE----HAE--ACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFI-DM---- 70 (331)
T ss_dssp HHHHHHHHHH----TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE-CT----
T ss_pred hHHHHHHHHh----CCC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEe-CC----
Confidence 4677777776 554 4555555589999999999999999999999999887665 4589999888 65
Q ss_pred CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH-cCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA-AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~-~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
.|++.+++.+++++ ++|++++|+||||.+++ +++|.++|++ +|+++|+|++|+.+.... +. ..+.+++
T Consensus 71 --~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~-~~---~~~~d~~ 139 (331)
T 1pff_A 71 --AVPGNIEKHLKPNT--RIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN-PL---DLGVDIV 139 (331)
T ss_dssp --TSTTHHHHTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC-GG---GGTCSEE
T ss_pred --CCHHHHHHhhcCCC--eEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC-hh---hcCCcEE
Confidence 37788999887654 99999999999999999 9999999999 999999999999766532 11 3467899
Q ss_pred EeccccccCCCcce-eEEEEccCCcH-HHHHHHHHhhcc-CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMGWR-VGYIAYPSEVE-GFATQLLKVQDN-IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIRE 303 (400)
Q Consensus 227 ~~s~sK~~g~~g~~-~G~i~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~ 303 (400)
++|+||+++.+|.| +||++.+ + ++.+++...... .+.+.+++.+.++...++. ...+.+....+.+.+.+
T Consensus 140 ~~s~~K~~~~~~~r~~G~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~ 212 (331)
T 1pff_A 140 VHSATKYINGHTDVVAGLVCSR---ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT----LDMRVKRAAENAQKVAE 212 (331)
T ss_dssp EEETTTTTSSSSSCCCEEEEEC---HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred EEECccccCCCCCceEEEEEeC---cHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch----HHHHHHHHHHHHHHHHH
Confidence 99999999888888 7999998 5 888888877665 4566777777776666653 23334444445555444
Q ss_pred HhccC--------------CCCcccC---CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC---------cc---
Q 015768 304 ALSPL--------------GEGAVKG---GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG---------AC--- 354 (400)
Q Consensus 304 ~L~~~--------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~---------~~--- 354 (400)
.|++. +...+.. ...+.++.+.++ +.+++...+ +++||.+.+.+ .|
T Consensus 213 ~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~gI~~~~~s~g~~~sl~~~~~~~ 287 (331)
T 1pff_A 213 FLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD----GLEKAKKVL-DNCHVVSLAVSLGGPESLIQHPASM 287 (331)
T ss_dssp HHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS----SHHHHHHHH-HTCSSSEECSSCCSSSCEEECHHHH
T ss_pred HHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC----CHHHHHHHH-HhCCCceeccCCCCcceeeecchhh
Confidence 44332 1111111 112556677775 355666655 58999876542 11
Q ss_pred -------------C-CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 355 -------------G-CRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 355 -------------~-~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+ .++++|++++. +++++++.+++.|++
T Consensus 288 ~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 288 THAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp TSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred cccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 1 15899999998 777777777777654
No 192
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.97 E-value=9.4e-29 Score=231.13 Aligned_cols=305 Identities=16% Similarity=0.179 Sum_probs=228.0
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCC
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPY 122 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~ 122 (400)
.++++.+++.+.+... .|.+..+..++++.+++++ |. +++++++|+|+|+..++.++ .++||+|+++.++
T Consensus 14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~ 84 (367)
T 3nyt_A 14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFV----GA--KYCISCANGTDALQIVQMALGVGPGDEVITPGFT 84 (367)
T ss_dssp HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHH----TC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCc
Confidence 3567888888777653 3545666788888888887 43 48999999999999999999 8999999999999
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|+++...++..|++++.+ +.+++.+.+|++.+++.+++++ ++|+ |+||+|...+ +++|.++|++||+++|+
T Consensus 85 ~~~~~~~~~~~G~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li~ 155 (367)
T 3nyt_A 85 YVATAETVALLGAKPVYV-DIDPRTYNLDPQLLEAAITPRT--KAII---PVSLYGQCAD---FDAINAIASKYGIPVIE 155 (367)
T ss_dssp CTHHHHHHHHTTCEEEEE-CBCTTTCSBCGGGTGGGCCTTE--EEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBEE
T ss_pred cHHHHHHHHHcCCEEEEE-ecCCccCCcCHHHHHHhcCcCC--cEEE---eeCCccChhh---HHHHHHHHHHcCCEEEE
Confidence 999999999999999999 8887767889999999997654 7776 7889999988 88999999999999999
Q ss_pred cccccccc-cCCCCccccCCCcEEEEecc--ccccCCCcceeEEEEccCCcHHHHHHHHHhhcc------------CCcC
Q 015768 203 DNTYEYFM-YDGRKHCCVEGDHVVNLFSF--SKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------------IPIC 267 (400)
Q Consensus 203 D~a~~~~~-~~~~~~~~~~~~~~i~~~s~--sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~------------~~~~ 267 (400)
|++|+.+. +.+..... .. ++++.|| +|.+|.+|. .|+++.++ +++.+++...... .++.
T Consensus 156 D~a~~~g~~~~~~~~~~-~~--di~~~Sf~~~K~l~~~g~-gg~~~~~~--~~l~~~~~~~~~~g~~~~~~~~~~g~~~~ 229 (367)
T 3nyt_A 156 DAAQSFGASYKGKRSCN-LS--TVACTSFFPSAPLGCYGD-GGAIFTND--DELATAIRQIARHGQDRRYHHIRVGVNSR 229 (367)
T ss_dssp ECTTTTTCEETTEETTS-SS--SEEEEECCTTSSSCCSSC-CEEEEESC--HHHHHHHHHHTBTTEEETTEECSCCCBCC
T ss_pred ECccccCCeECCeeccC-CC--CEEEEECCCCCcCCCcCc-eeEEEeCC--HHHHHHHHHHHhcCCCcCceeeccCcCCC
Confidence 99998543 33222111 11 5788886 899985465 88988865 7888887765432 3455
Q ss_pred ccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CCCC----ceEEEeeCCCCCCCHHHHHHHHHH
Q 015768 268 ASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GGEG----AIYLWARLPEKHLDDFEVVRWLAH 342 (400)
Q Consensus 268 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~l~~ 342 (400)
.+.+...++...++. +++..++.+++++++.+.|++++. .+. .+.+ ...+.+.++ +.+++...|.
T Consensus 230 ~~~~~aa~~~~~l~~----~~~~~~~~~~~~~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~- 299 (367)
T 3nyt_A 230 LDTLQAAILLPKLEI----FEEEIALRQKVAAEYDLSLKQVGI-GTPFIEVNNISVYAQYTVRMD----NRESVQASLK- 299 (367)
T ss_dssp CCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCTTEECCCSSEEEECS----SHHHHHHHHH-
T ss_pred ccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCCe-eccCCCCCCceeeEEEEEEeC----CHHHHHHHHH-
Confidence 677777766666654 455666777778888888888753 222 1111 122344444 4678888775
Q ss_pred hcCeEEeCCCcc--------C------------CCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 343 RHGVVVIPGGAC--------G------------CRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 343 ~~gi~v~~g~~~--------~------------~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
++||.+.++... . ....+|++++. +|++|++..++.|++.
T Consensus 300 ~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 300 AAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred HCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 789999876531 0 02479999887 8999999998888654
No 193
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.97 E-value=1.9e-27 Score=225.57 Aligned_cols=304 Identities=20% Similarity=0.129 Sum_probs=211.0
Q ss_pred CCCCcHHHHHHHHHhhcCCCCCCCCCC--CCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768 41 YWQPPKMAMEKVKELVWDPSISKYGAD--EGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVM 118 (400)
Q Consensus 41 ~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv 118 (400)
.++.++.+.+++. ... ...|+.. ...+++++.+++++ |. +++++++|+++|++.++.++.++||+|++
T Consensus 31 ~~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~----g~--~~~~~~~~gt~a~~~al~~l~~~gd~vi~ 100 (412)
T 2cb1_A 31 GFKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALE----GA--LEAVVLASGQAATFAALLALLRPGDEVVA 100 (412)
T ss_dssp CCSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHH----TC--SEEEEESSHHHHHHHHHHTTCCTTCEEEE
T ss_pred ecCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHh----CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEE
Confidence 3444555555443 222 3345432 23445555555554 64 48999999999999999999999999999
Q ss_pred eCCCccchhHHH----HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHH
Q 015768 119 FAPYYFNSYMSF----QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCK 194 (400)
Q Consensus 119 ~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~ 194 (400)
+.|+|++....+ +..|++++.+ +. +++++++.+++++ ++|++++|+||+|.+.+ +++|.++|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~g~~~~~~-~~-------~~~~l~~~i~~~~--~~v~~~~~~n~~G~~~~---l~~i~~l~~ 167 (412)
T 2cb1_A 101 AKGLFGQTIGLFGQVLSLMGVTVRYV-DP-------EPEAVREALSAKT--RAVFVETVANPALLVPD---LEALATLAE 167 (412)
T ss_dssp ETTCCHHHHHHHHHTTTTTTCEEEEE-CS-------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred eCCCchhHHHHHHHHHHHcCCEEEEE-CC-------CHHHHHHHhccCC--eEEEEeCCCCCCccccc---HHHHHHHHH
Confidence 999998877654 4578999888 54 3889999998655 99999999999999999 999999999
Q ss_pred HcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc-H----------------------
Q 015768 195 AAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV-E---------------------- 251 (400)
Q Consensus 195 ~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~-~---------------------- 251 (400)
+||+++|+|++|+.+.... .....+.++++.|+||+++.+|.|+|+++..++. .
T Consensus 168 ~~~~~li~D~~~~~~~~~~---~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 244 (412)
T 2cb1_A 168 EAGVALVVDNTFGAAGALC---RPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALR 244 (412)
T ss_dssp HHTCEEEEECGGGTTTTSC---CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHG
T ss_pred HcCCEEEEECCCccccccC---CccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccc
Confidence 9999999999998662211 1223467899999999998788889987765421 0
Q ss_pred --HHHHHHHHhh-ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc-CC-----------
Q 015768 252 --GFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK-GG----------- 316 (400)
Q Consensus 252 --~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~----------- 316 (400)
++.+.++... .......++...+++...++. +..+.++..++.+++.+.|.+.+.+... .|
T Consensus 245 ~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~ 320 (412)
T 2cb1_A 245 ARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNA 320 (412)
T ss_dssp GGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH
Confidence 4445554433 222334455555555555543 4556666778889999999887665522 22
Q ss_pred -----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCC---------ccC-----------------CCCeEEEEec
Q 015768 317 -----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGG---------ACG-----------------CRGHLRISFG 365 (400)
Q Consensus 317 -----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~---------~~~-----------------~~~~iRi~~~ 365 (400)
..+.++.+.+ . +.+.+...+ ++.||.+ .++ .|. .++.+|+|++
T Consensus 321 ~~~~~~~~~iv~~~~-~---~~~~~~~~l-~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g 394 (412)
T 2cb1_A 321 RKYLASGGPILTLDL-G---DLERASRFL-GAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVG 394 (412)
T ss_dssp HHHCSSSCSEEEEEC-S---SHHHHHHHH-HHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECC
T ss_pred HHhCCCCceEEEEEe-C---CHHHHHHHH-HhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEec
Confidence 1245666777 3 455666544 5789998 663 221 1579999999
Q ss_pred c-CCHHHHHHHHHHHH
Q 015768 366 G-LVEDDCKAAADRLR 380 (400)
Q Consensus 366 ~-~~~~~~~~~~~~l~ 380 (400)
. +++++++.+.+.|+
T Consensus 395 ~~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 395 LEDPLDLLALFEEALE 410 (412)
T ss_dssp SSCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 8 66677766666664
No 194
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.97 E-value=5.8e-29 Score=233.08 Aligned_cols=307 Identities=13% Similarity=0.099 Sum_probs=223.7
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCc
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAPYY 123 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p~~ 123 (400)
++++++++.+.+... .|.+..+..++++.+++++ |. +++++++|+|+|++.++.++ .++||+|+++.++|
T Consensus 16 ~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~--~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~ 86 (373)
T 3frk_A 16 EYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYC----NV--NYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTF 86 (373)
T ss_dssp HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHH----TS--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSC
T ss_pred CHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHh----CC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCc
Confidence 577788888777653 2556667788999999987 43 48999999999999999999 89999999999999
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
+++...++..|++++.+ +.+++++.+|++++++.+++++ ++|+ ++||+|...+ +++|.++|+++|+++|+|
T Consensus 87 ~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~l~~~~--~~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~D 157 (373)
T 3frk_A 87 IATALAVSYTGAKPIFV-EPDIRTYNIDPSLIESAITEKT--KAII---AVHLYGQPAD---MDEIKRIAKKYNLKLIED 157 (373)
T ss_dssp THHHHHHHHHSCEEEEE-CEETTTTEECGGGTGGGCCTTE--EEEE---EECCTTCCCC---HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHcCCEEEEE-eccccccCcCHHHHHHhcCCCC--eEEE---EECCCcCccc---HHHHHHHHHHcCCEEEEE
Confidence 99999999999999999 8886667889999999997654 7777 6789999999 889999999999999999
Q ss_pred cccccccc-CCCCccccCCCcEEEEeccc--cccCCCcceeEEEEccCCcHHHHHHHHHhhcc------------CCcCc
Q 015768 204 NTYEYFMY-DGRKHCCVEGDHVVNLFSFS--KAYGMMGWRVGYIAYPSEVEGFATQLLKVQDN------------IPICA 268 (400)
Q Consensus 204 ~a~~~~~~-~~~~~~~~~~~~~i~~~s~s--K~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~------------~~~~~ 268 (400)
++|+.+.. .+... ..-.++++.||+ |+++..| +.|+++.++ +++.+++...... .++..
T Consensus 158 ~a~~~g~~~~~~~~---~~~~d~~~~S~~~~K~l~~~g-~gg~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 231 (373)
T 3frk_A 158 AAQAHGSLYKGMKV---GSLGDAAGFSFYPAKNLGSLG-DGGAVVTND--KDLAEKIKALSNYGSEKKYHHIYKGFNSRL 231 (373)
T ss_dssp CTTCTTCEETTEET---TSSSSEEEEECCTTSSSCCSS-SCEEEEESC--HHHHHHHHHHHBTTCSBTTBCCSCCCBCCC
T ss_pred CCcccCCEECCEec---cccccEEEEeCcCCCccCccc-eeEEEEeCC--HHHHHHHHHHHhcCcccCCccccccccCCC
Confidence 99985432 22111 111347778866 9986324 478888875 6677777655431 12233
Q ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC-CCceE----EEeeCCCCCCCHHHHHHHHHHh
Q 015768 269 SIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG-EGAIY----LWARLPEKHLDDFEVVRWLAHR 343 (400)
Q Consensus 269 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~l~~~ 343 (400)
+.+...+....++. +++..++.+++.+++.+.|++++ +.+... .+... +.+..+ +.+++...|. +
T Consensus 232 ~~~~aa~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~L~-~ 301 (373)
T 3frk_A 232 DELQAGFLRVKLKY----LDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRSE----KRDELQKYLN-N 301 (373)
T ss_dssp CHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEES----SHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEeC----CHHHHHHHHH-H
Confidence 44444443333332 46677778888899999998876 343321 11111 222222 5778888775 7
Q ss_pred cCeEEeCCCccC--C---------------------CCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 344 HGVVVIPGGACG--C---------------------RGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 344 ~gi~v~~g~~~~--~---------------------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
+||.+.++.... . .+.+|++++. +|++|++.+++.|++...+
T Consensus 302 ~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 302 NGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp TTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred CCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 899998765210 0 1579999988 9999999999988876554
No 195
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.97 E-value=2e-29 Score=236.63 Aligned_cols=324 Identities=12% Similarity=0.102 Sum_probs=231.3
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCc
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY 123 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~ 123 (400)
.++++++++.+.+.++... + ......++.+++++.+.+.+|.+ +.+++++|+|++++.++..+ ++||+|++..++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-h-~~~~~~~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~ 84 (379)
T 3ke3_A 9 IDPNGLLEYSVVYTDRALN-H-MSKAFQEVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGW 84 (379)
T ss_dssp CSTTSCCCCCSSCCTTSCC-T-TSHHHHHHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSH
T ss_pred CCHHHHHHHHHhccCCCCC-C-CCHHHHHHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCc
Confidence 3455555554444343221 1 22334567778888888888876 78999999999999998655 6899999999999
Q ss_pred cchh--HHHHhcC--cEEEEeccCCCCC--------CCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHH
Q 015768 124 FNSY--MSFQMTG--VTHILVGPCSSKT--------LHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRIS 190 (400)
Q Consensus 124 ~~~~--~~~~~~g--~~~~~~~~~~~~~--------~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~ 190 (400)
++.. ..++..| .+++.+ +.+.+| ..+|++++++.+. .++ ++|++++++|++|.++|.+++++|.
T Consensus 85 ~~~~~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~--~~v~~~~~~~~~G~~~~~~~l~~i~ 161 (379)
T 3ke3_A 85 FSYRWTQILEKGKFAKSSTVL-TAERTEDTEAPKPFAPVDIETAVAKIKEDKS--AIVYAPHVETSSGIILSEEYIKALS 161 (379)
T ss_dssp HHHHHHHHHHHHCCSSEEEEE-ECEESSCCSSCCCEECCCHHHHHHHHHHHTC--SEEEEESEETTTTEECCHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCCceEEE-eccccccccccCCCCCCCHHHHHHHHhhcCC--cEEEEEeecCCCceeCCHHHHHHHH
Confidence 7753 3455556 477777 654311 1479999999996 454 8999999999999999999999999
Q ss_pred HHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhc--------
Q 015768 191 DLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQD-------- 262 (400)
Q Consensus 191 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~-------- 262 (400)
++|++||+++|+|++++ + +.+......+.++++.|++|+++ ++.++|+++.+ +++.+.+.....
T Consensus 162 ~~~~~~~~~li~D~~~~-g---~~~~~~~~~~~d~~~~s~~K~l~-~~~g~g~~~~~---~~~~~~l~~~~~~~~~~~~~ 233 (379)
T 3ke3_A 162 EAVHSVGGLLVIDCIAS-G---CVWLDMKELGIDVLISAPQKGWS-STPCAGLVMLS---AAAIKKVESTESNCFSLDLK 233 (379)
T ss_dssp HHHHHTTCEEEEECTTC-T---TCCCCHHHHTCSEEEECTTTTTC-SCCCEEEEEEC---HHHHHHHHTCCCSCSTTCHH
T ss_pred HHHHHcCCEEEEEeccc-C---CccccccccCCCEEEecchhhcC-CCCceEEEEEC---HHHHHhhhcCCCCceeecHH
Confidence 99999999999999986 2 22222223356789999999996 44568999988 677777654110
Q ss_pred --------------cCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHHhccCCCCcccCCC---CceEEEe
Q 015768 263 --------------NIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREALSPLGEGAVKGGE---GAIYLWA 324 (400)
Q Consensus 263 --------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~ 324 (400)
...++++...+.++.++++...+. ++++.++++++++++++.|++++. .+..+. ......+
T Consensus 234 ~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~-~~~~~~~~~~~~i~~~ 312 (379)
T 3ke3_A 234 QWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGI-ESVAAEGFEAPGVVVS 312 (379)
T ss_dssp HHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CBSBCTTCBCSSEEEE
T ss_pred HHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCC-EecCCccccCceEEEE
Confidence 012377888888877777642222 577888889999999999998865 443332 2223333
Q ss_pred eCCCCCCCHHHHHHHHHHhcCeEEeCCCccCC-----CCeEEEEecc-CCHHHHHHHHHHHHHHHHHHh
Q 015768 325 RLPEKHLDDFEVVRWLAHRHGVVVIPGGACGC-----RGHLRISFGG-LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 325 ~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.++. ....+...| .++||.+.+|..|.. .+.+||+++. ++++|+++++++|+++++++.
T Consensus 313 ~~~~---~~~~~~~~L-~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 313 YTER---DDMHKGSAF-AEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp ECSC---HHHHSSHHH-HHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ccCC---cchHHHHHH-HHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 4432 111224444 588999999876542 6799999886 799999999999999998865
No 196
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.97 E-value=1.2e-29 Score=241.82 Aligned_cols=326 Identities=15% Similarity=0.134 Sum_probs=226.6
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.++||+.+. ++++ .+|++++++.+.+.+.. .|+ +..+++.++++++.+.++ .++++++++|+++|+.
T Consensus 49 ~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~ 122 (424)
T 2e7u_A 49 ADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGL--TFG---APSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATM 122 (424)
T ss_dssp TTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS--CCS---SCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHH
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHH
Confidence 3567799998876 4444 68999999999987642 232 234566777777777765 5789999999999999
Q ss_pred HHHHH---hcCCCCEEEEeCCCccchhHHHH-h-------------cCc------EEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 104 NIVLT---LCDAGDSVVMFAPYYFNSYMSFQ-M-------------TGV------THILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 104 ~~~~~---l~~~gd~vlv~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
.+++. +.+ ++.|++.+|+|+++..... . .|+ .++.+ |. .|++.+++.++
T Consensus 123 ~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~-~~------~d~~~le~~l~ 194 (424)
T 2e7u_A 123 SALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVL-EY------NDPEGLREVLK 194 (424)
T ss_dssp HHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEE-CT------TCHHHHHHHHH
T ss_pred HHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeC-CC------CCHHHHHHHHH
Confidence 99986 444 5789999999988654321 1 121 23444 32 27899999886
Q ss_pred cC-CCCeEEEEeCCCC-CCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--cCCCcEEEEeccccccC
Q 015768 161 TK-PTPKLVSVVNPGN-PSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--VEGDHVVNLFSFSKAYG 235 (400)
Q Consensus 161 ~~-~~~~~v~l~~p~n-ptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~g 235 (400)
.. ..+++ ++++|+| ++|.+ .+.+++++|.++ ++||+++|+||+|+++ ..+..... .....+ +.|+||++|
T Consensus 195 ~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~d--i~s~sK~l~ 269 (424)
T 2e7u_A 195 RRGEEIAA-IIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPD--LVTLGKILG 269 (424)
T ss_dssp HHGGGEEE-EEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCS--EEEECGGGG
T ss_pred hCCCCEEE-EEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcc--hhhhhhhhh
Confidence 31 11344 4555654 48975 479999999999 9999999999999977 32322111 011122 338899998
Q ss_pred CCcceeEEEEccCCcHHHHHHHHHhh---ccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----
Q 015768 236 MMGWRVGYIAYPSEVEGFATQLLKVQ---DNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL---- 308 (400)
Q Consensus 236 ~~g~~~G~i~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---- 308 (400)
+|+|+||++++ +++++.+.... ...+++.|++++.++.++|+...+ .++..+++.++++++++.|+++
T Consensus 270 -~G~~~G~~~~~---~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~ 344 (424)
T 2e7u_A 270 -GGLPAAAYAGR---REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE-NPGYYAYLEDLGARLEAGLKEVLKEK 344 (424)
T ss_dssp -TTSSCEEEEEC---HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH-CTHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCcceEEEEEc---HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 69999999998 77777665421 234667889999888888874211 1456677777778887777664
Q ss_pred CCCcccCCCCceEEEeeCCCCC------------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHH
Q 015768 309 GEGAVKGGEGAIYLWARLPEKH------------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAA 376 (400)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~ 376 (400)
+......+. +.++|+.++... .+..++...|+ ++||.+.++. ...+|+++. .+++++++++
T Consensus 345 ~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~----~~~~~~~~~-~t~~~i~~~l 417 (424)
T 2e7u_A 345 GLPHTVNRV-GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSN----FEAAFLSVA-HREEDVEKTL 417 (424)
T ss_dssp TCCCEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSS----SSCEECCTT-CCHHHHHHHH
T ss_pred CCceEEEee-ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccC----CCceEeecc-CCHHHHHHHH
Confidence 543233444 678888886411 12446777776 7999999875 235777755 5999999999
Q ss_pred HHHHHHH
Q 015768 377 DRLRRGL 383 (400)
Q Consensus 377 ~~l~~~l 383 (400)
++|++++
T Consensus 418 ~~l~~~l 424 (424)
T 2e7u_A 418 EALRKAL 424 (424)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998763
No 197
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.97 E-value=6.4e-28 Score=227.04 Aligned_cols=279 Identities=16% Similarity=0.155 Sum_probs=203.3
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCSS 145 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~ 145 (400)
..++++.+++++ |.+ +.++++++++|+..++.++.++||+|+++.|+|+++... ++..|++++.+ +.
T Consensus 61 ~~~l~~~la~~~----g~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v-~~-- 131 (389)
T 3acz_A 61 VEQFEEMVCSIE----GAA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI-DT-- 131 (389)
T ss_dssp HHHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE-CT--
T ss_pred HHHHHHHHHHHh----CCC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-CC--
Confidence 345555555554 654 677777888999999999999999999999999987765 57789999988 65
Q ss_pred CCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEE
Q 015768 146 KTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i 225 (400)
.|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|++||+++|+|++|..+.... + ...+.++
T Consensus 132 ----~d~~~l~~~i~~~~--~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~-~---~~~~~di 198 (389)
T 3acz_A 132 ----SDVEKVKAAWKPNT--KMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK-P---LELGADI 198 (389)
T ss_dssp ----TCHHHHHHTCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC-G---GGTTCSE
T ss_pred ----CCHHHHHHhcCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC-c---cccCCeE
Confidence 28899999998755 99999999999999999 8999999999999999999998665421 2 2246779
Q ss_pred EEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHH
Q 015768 226 NLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREA 304 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 304 (400)
++.|+||+++.+|.|+ ||++.++ +++++++.........+.++...+++...++. +..+.++..++...+.+.
T Consensus 199 ~~~S~sK~~~~~~~~~~G~v~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~~~~~l~~~ 272 (389)
T 3acz_A 199 ALHSVSKYINGHGDVIGGVSSAKT--AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT----LPIRMQIHMENGLKVAKF 272 (389)
T ss_dssp EEEETTTTTTCSSCCCCEEEEESS--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHH
T ss_pred EEECChhhccCCCCceeEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH----HHHHHHHHHHHHHHHHHH
Confidence 9999999998888897 9999883 27888877665434455677777777777764 344455566666666666
Q ss_pred hccCCCC--------------cccC---CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC---C------Ccc----
Q 015768 305 LSPLGEG--------------AVKG---GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---G------GAC---- 354 (400)
Q Consensus 305 L~~~~~~--------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~---g------~~~---- 354 (400)
|++++.+ .+.. ...+.++.+.++. .++.. .++++.|+.+.+ | ..|
T Consensus 273 l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~----~~~~~-~~l~~~~i~~~~~s~G~~~sl~~~~~~~~ 347 (389)
T 3acz_A 273 LEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS----FEAAK-KLMEHLKVCTLAVSLGCVDTLIEHPASMT 347 (389)
T ss_dssp HHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS----HHHHH-HHHTTCSSSEEBSCCCCSSCEEECTTTTT
T ss_pred HHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC----HHHHH-HHHHhCCCcEECcCCCCcccEeeCCcccc
Confidence 6654321 1111 1124566667752 34444 455678988876 4 222
Q ss_pred ------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 355 ------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 355 ------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
+ .++.+|+|++. ++.++.++.|.++++
T Consensus 348 ~~~~~~~~~~~~g~~~~~iRlsvg~---~~~~~li~~l~~al~ 387 (389)
T 3acz_A 348 HAAVPENIMRKQGITPELVRISVGI---ENVDDIIADLKQALE 387 (389)
T ss_dssp TSSSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHT
T ss_pred cccCCHHHHHhcCCCcCeEEEEecc---CCHHHHHHHHHHHHh
Confidence 1 15799999997 366677788877775
No 198
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.96 E-value=1.2e-28 Score=238.91 Aligned_cols=333 Identities=11% Similarity=0.016 Sum_probs=236.6
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC---------CcEEEeCChHHHHHHHHHHhcCC----
Q 015768 46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK---------SSVMVTAGANQAFVNIVLTLCDA---- 112 (400)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~---------~~i~~~~g~t~a~~~~~~~l~~~---- 112 (400)
..+.+.+.+++.. ....|...++...+++++++++++.+|.+. ..+++|+|+|+|+..++.++..+
T Consensus 88 ~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~ 166 (486)
T 1js3_A 88 AMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRR 166 (486)
T ss_dssp HHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhh
Confidence 3455566666643 355566666678999999999999999874 36899999999999998876421
Q ss_pred -----CC----------EEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC----CCeEEEEeCC
Q 015768 113 -----GD----------SVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP----TPKLVSVVNP 173 (400)
Q Consensus 113 -----gd----------~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~----~~~~v~l~~p 173 (400)
|| .|+++.++|+++...++..|++++.+ |.++ ++.+|+++|++.+++++ .|.+|++++|
T Consensus 167 ~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v-~~d~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~ 244 (486)
T 1js3_A 167 LQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAI-PSDG-KFAMRASALQEALERDKAAGLIPFFVVATLG 244 (486)
T ss_dssp HHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEE-CCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEe-ecCC-CCCCCHHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 42 37889999999999999999999999 8864 56899999999997443 1348888899
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc---cCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC---VEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~ 250 (400)
+|++|.+.+ +++|+++|++||+++++|++|+.+......... ...+.+.++.++||++++ +.++|+++.++
T Consensus 245 ~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~-p~~~G~l~~~~-- 318 (486)
T 1js3_A 245 TTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV-NFDCSAMWVKR-- 318 (486)
T ss_dssp CTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC-CSSCEEEEESC--
T ss_pred CCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC-CcceEEEEEeC--
Confidence 999999988 999999999999999999999976542211111 012345677899999974 48899999886
Q ss_pred HHH-HHHHH---Hhhcc-----------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768 251 EGF-ATQLL---KVQDN-----------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309 (400)
Q Consensus 251 ~~~-~~~l~---~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (400)
+.. .+.+. .+... .+.....+.++++...+. .+++.++.++..++++++.+.|++++
T Consensus 319 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~ 396 (486)
T 1js3_A 319 RTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG--VKGLQAYIRKHVQLSHEFEAFVLQDP 396 (486)
T ss_dssp HHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 443 23221 00000 001123455565555553 46678888999999999999999887
Q ss_pred CCcccC-CCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHH
Q 015768 310 EGAVKG-GEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 310 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~ 386 (400)
++.+.. +. ..++.++++.......++..+|. +.|+.+..+..+...+++|++++. ++++++++++++|+++++++
T Consensus 397 ~~~~~~~~~-~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~ 474 (486)
T 1js3_A 397 RFEVCAEVT-LGLVCFRLKGSDGLNEALLERIN-SARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAEL 474 (486)
T ss_dssp TEEECSCCC-SSEEEEEESSCHHHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEeCCCc-eeEEEEEecChHHHHHHHHHHHH-hcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 656654 44 44555566421001467777776 567554333334456799999754 68999999999999999988
Q ss_pred hccCc
Q 015768 387 VKDGM 391 (400)
Q Consensus 387 ~~~~~ 391 (400)
.++.+
T Consensus 475 ~~~~~ 479 (486)
T 1js3_A 475 LAAEE 479 (486)
T ss_dssp HC---
T ss_pred Hhhhc
Confidence 76543
No 199
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.96 E-value=1.8e-28 Score=230.92 Aligned_cols=282 Identities=18% Similarity=0.112 Sum_probs=198.4
Q ss_pred CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH----HHhcCcEEEEeccCC
Q 015768 69 GLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS----FQMTGVTHILVGPCS 144 (400)
Q Consensus 69 g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~ 144 (400)
...++++.+++++ |.+ +.++++++++|++.++. +.++||+|+++.|+|++.... ++..|++++.+ |.+
T Consensus 56 ~~~~lr~~la~~~----g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v-~~~ 127 (393)
T 1n8p_A 56 NRENLERAVAALE----NAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFT-NDL 127 (393)
T ss_dssp HHHHHHHHHHHHT----TCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEE-SSH
T ss_pred hHHHHHHHHHHHh----CCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEe-CCC
Confidence 3456666666665 544 56666667999999999 889999999999999876653 45678898888 654
Q ss_pred CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc----CCEEEEcccccccccCCCCccccC
Q 015768 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA----GSWLVVDNTYEYFMYDGRKHCCVE 220 (400)
Q Consensus 145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~----~~~li~D~a~~~~~~~~~~~~~~~ 220 (400)
| +++++.+++++ ++|++++|+||+|.++| +++|.++|+++ |+++|+|++|+.+.... . ..
T Consensus 128 ------d-~~l~~~i~~~t--~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~~-~---~~ 191 (393)
T 1n8p_A 128 ------L-NDLPQLIKENT--KLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYISN-P---LN 191 (393)
T ss_dssp ------H-HHHHHHSCSSE--EEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHCC-G---GG
T ss_pred ------h-HHHHHhcccCc--eEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccCC-H---HH
Confidence 6 78998887655 99999999999999999 89999999999 99999999999877642 1 22
Q ss_pred CCcEEEEeccccccCCCccee-EEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 221 GDHVVNLFSFSKAYGMMGWRV-GYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 221 ~~~~i~~~s~sK~~g~~g~~~-G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
.+.++++.|+||.+|.+|+|+ ||++.++ +++++.+.........+.++....++...++. +....++..++..
T Consensus 192 ~~~di~~~S~sK~~g~~G~rigG~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~ 265 (393)
T 1n8p_A 192 FGADIVVHSATKYINGHSDVVLGVLATNN--KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT----LHLRVRQAALSAN 265 (393)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEESC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHH
T ss_pred cCCeEEEEECcccccCCCCceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch----HHHHHHHHHHHHH
Confidence 357799999999999889998 9998853 67778777655433445566666666666654 4556666777788
Q ss_pred HHHHHhccCCC-Cc-ccCC---------------C--C-ceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCcc-----
Q 015768 300 IIREALSPLGE-GA-VKGG---------------E--G-AIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGAC----- 354 (400)
Q Consensus 300 ~l~~~L~~~~~-~~-~~~~---------------~--~-~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~----- 354 (400)
.+.+.|++.+. +. +..| . . +.++++.++....+...+...+ +..++.+..|+.|
T Consensus 266 ~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l-~~~~~~~s~G~~~s~~~~ 344 (393)
T 1n8p_A 266 KIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASST-RLFTLAESLGGIESLLEV 344 (393)
T ss_dssp HHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHC-SSSEECSCCCCSSCEEEC
T ss_pred HHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhC-CcceECCCCCCCcceeec
Confidence 88888877643 21 1111 1 2 5577788864211233444433 2345555444321
Q ss_pred -----C-------------CCCeEEEEecc-CCHHHHHHHHHHHHH
Q 015768 355 -----G-------------CRGHLRISFGG-LVEDDCKAAADRLRR 381 (400)
Q Consensus 355 -----~-------------~~~~iRi~~~~-~~~~~~~~~~~~l~~ 381 (400)
+ .++.+|+|++. .++++++.+.+.|++
T Consensus 345 p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~ 390 (393)
T 1n8p_A 345 PAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQ 390 (393)
T ss_dssp TTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 1 14689999998 556666555555544
No 200
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.96 E-value=2.6e-28 Score=237.15 Aligned_cols=332 Identities=13% Similarity=0.105 Sum_probs=237.5
Q ss_pred CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHh----c-------
Q 015768 43 QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTL----C------- 110 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l----~------- 110 (400)
+.++.+++++.....+.....|+..+...++++++.+++++.+|.++ +++++|+|+|+|+..++.++ .
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~ 190 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHS 190 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 35788888887666555455565555677899999999999999875 89999999999999999884 2
Q ss_pred --CC------CC-EEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCC
Q 015768 111 --DA------GD-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPG 174 (400)
Q Consensus 111 --~~------gd-~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~ 174 (400)
++ |+ .|+++.++|+++...++..|. +++.+ |.+++ +.+|+++|++.+++. +.+.+|++++++
T Consensus 191 ~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~~-~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~ 268 (497)
T 2qma_A 191 IQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTV-DANAD-GTMDITKLDEVIAQAKAEGLIPFAIVGTAGT 268 (497)
T ss_dssp HHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SSBCGGGHHHHHHHHHHTTCEEEEEEEEBSC
T ss_pred hhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEE-ecCCC-CcCCHHHHHHHHHHHHHCCCcceEEEEcCCC
Confidence 12 46 899999999999999888876 78888 88654 578999999998742 323478888999
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccC-CCcEEEEeccccccCCCcceeEEEEccCCcH
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE 251 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~ 251 (400)
|++|.+.+ +++|.++|++||+++++|++|+.+..... .. ... ...++++.|+||+++. +.++|+++.++ +
T Consensus 269 ~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~-p~~~G~l~~~~--~ 341 (497)
T 2qma_A 269 TDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQ-TISCGALLVND--K 341 (497)
T ss_dssp TTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCC-CSSCEEEEESC--G
T ss_pred CCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCC-CcceEEEEEeC--H
Confidence 99999988 99999999999999999999998765332 11 111 1346788899999974 46899998875 3
Q ss_pred HHHHHHHHhhccC-C----------c------CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCccc
Q 015768 252 GFATQLLKVQDNI-P----------I------CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVK 314 (400)
Q Consensus 252 ~~~~~l~~~~~~~-~----------~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (400)
...+.+....... . + ....+.++++...+ +.+++.++.++..++++++.+.|++++.+.+.
T Consensus 342 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 419 (497)
T 2qma_A 342 SNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV--GPKALGDMYDHLLAQTLEVADMIRTNDQFELL 419 (497)
T ss_dssp GGGGGGCC--------------------CCSCCCTHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC
T ss_pred HHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence 3222221100000 0 0 00123334444444 35667888899999999999999998665654
Q ss_pred CCCCceEEEeeCCCCCCCH----HHHHHHHHHhcCeEEeCCCccCCCCeEEEEe-cc-CCHHHHHHHHHHHHHHHHHH
Q 015768 315 GGEGAIYLWARLPEKHLDD----FEVVRWLAHRHGVVVIPGGACGCRGHLRISF-GG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~-~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
.+....++++++.....+. .++...+. +.|+.+.++..+.+.+++|+++ +. +++++++.++++|+++++++
T Consensus 420 ~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~-~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 420 AEPSLSTVLFRATHETADLDELNKALRLEAL-TRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp SCCSSSEEEEEECCSSSCHHHHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCceEEEEEEcCCccCHHHHHHHHHHHHH-hCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 3333556666765422122 34555564 7798887655555567999998 44 79999999999999988763
No 201
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.96 E-value=1.2e-27 Score=232.73 Aligned_cols=331 Identities=12% Similarity=0.105 Sum_probs=234.9
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcC--------CC-
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD--------AG- 113 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~--------~g- 113 (400)
++.++..+.....+.....|...+....+++++.+++++.+|.+ ++++++|+|+|+|+..++.++.. +|
T Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~ 184 (504)
T 2okj_A 105 IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM 184 (504)
T ss_dssp HHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred HHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence 44444333333333334556555566778999999999999988 78999999999999999998853 56
Q ss_pred ----C-EEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCC
Q 015768 114 ----D-SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 114 ----d-~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~ 181 (400)
+ .|+++.++|+++...++..|. +++.+ |.+++ +.+|+++|++.+++ ...+++|++++++|++|.+.
T Consensus 185 ~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~~-~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~ 262 (504)
T 2okj_A 185 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI-KCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD 262 (504)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC
T ss_pred cccCCeEEEECCcchHHHHHHHHHcCCCcccEEEE-ecCCC-CCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC
Confidence 6 799999999999999988876 78888 88654 57899999999874 11258999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc-ccC--CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC-CVE--GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 258 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~-~~~--~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~ 258 (400)
+ +++|.++|++||+++++|++|+.+........ ... ...++++.|+||+++.| .++|+++.++ +++.+...
T Consensus 263 ~---l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~--~~~~~~~~ 336 (504)
T 2okj_A 263 P---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKE--KGILQGCN 336 (504)
T ss_dssp C---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESS--TTHHHHHH
T ss_pred C---HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEEC--HHHHHHHh
Confidence 8 89999999999999999999998775322211 111 24568888999999744 6899999885 34544322
Q ss_pred Hhhc-cC----C----------------cCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC--
Q 015768 259 KVQD-NI----P----------------ICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-- 315 (400)
Q Consensus 259 ~~~~-~~----~----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-- 315 (400)
.... .. . ...+.+.++++..++. .+.+.++.++..++++++.+.|++++++++..
T Consensus 337 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~ 414 (504)
T 2okj_A 337 QMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG--TVGFENQINKCLELAEYLYAKIKNREEFEMVFNG 414 (504)
T ss_dssp CCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSS
T ss_pred cCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 1110 00 0 0123566666666665 45678888999999999999999986656654
Q ss_pred -CCCceEEEeeCCCCCC--------------CHHHHHHHHHHhcCeEEeCCCccCC-CCeEEEEec-c-CCHHHHHHHHH
Q 015768 316 -GEGAIYLWARLPEKHL--------------DDFEVVRWLAHRHGVVVIPGGACGC-RGHLRISFG-G-LVEDDCKAAAD 377 (400)
Q Consensus 316 -~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~~gi~v~~g~~~~~-~~~iRi~~~-~-~~~~~~~~~~~ 377 (400)
|..+++++...+.... ...++...|. ++|+.+..+..+.. ++++|++++ . ++++|++.+++
T Consensus 415 ~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~ 493 (504)
T 2okj_A 415 EPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIE 493 (504)
T ss_dssp CCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHH
T ss_pred CCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHH
Confidence 5555655544442100 0345777776 66754332222332 368999997 4 79999999999
Q ss_pred HHHHHHHHH
Q 015768 378 RLRRGLEEL 386 (400)
Q Consensus 378 ~l~~~l~~~ 386 (400)
+|+++++++
T Consensus 494 ~l~~~~~~~ 502 (504)
T 2okj_A 494 EIERLGQDL 502 (504)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHHH
Confidence 999887653
No 202
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.96 E-value=1.3e-27 Score=232.25 Aligned_cols=330 Identities=12% Similarity=0.101 Sum_probs=234.6
Q ss_pred cHHHH-HHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC--CCcEEEeCChHHHHHHHHHHhcC----------
Q 015768 45 PKMAM-EKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY--KSSVMVTAGANQAFVNIVLTLCD---------- 111 (400)
Q Consensus 45 ~~~v~-~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~--~~~i~~~~g~t~a~~~~~~~l~~---------- 111 (400)
++.++ +.+.+.+..+ ...|...++..++++++++|+++.+|.+ +..+++|+|+|+|+..++.++..
T Consensus 108 ~~~~~~e~l~~~~~~~-~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G 186 (511)
T 3vp6_A 108 IIGLAGEWLTSTANTN-MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG 186 (511)
T ss_dssp HHHHHHHHHHHHHCCC-SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred HHHHHHHHHHHHhccC-CCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence 44444 4455555443 5677777788899999999999999987 56899999999999999888754
Q ss_pred ----CCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEeCCCCCCccC
Q 015768 112 ----AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 112 ----~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~~ 180 (400)
+++.|+++.++|+++...++..|. +++.+ |.+++ +.+|+++|++.+++. ..+++|++++++|++|.+
T Consensus 187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v-~~d~~-~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v 264 (511)
T 3vp6_A 187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILI-KCNER-GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF 264 (511)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB
T ss_pred cccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEe-ecCCC-CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc
Confidence 577999999999999999999998 88888 88755 588999999999743 125899999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC---CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHH
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQL 257 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l 257 (400)
.+ +++|+++|++||+|+++|++|+.+........... ...+.++.+++|+++.+ ..+|+++.++ +++.+..
T Consensus 265 d~---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~--~~~~~~~ 338 (511)
T 3vp6_A 265 DP---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKE--KGILQGC 338 (511)
T ss_dssp CC---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESS--TTHHHHH
T ss_pred cc---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCC-cCeEEEEEeC--HHHHHHH
Confidence 88 99999999999999999999997665332221111 23467888999999744 6789888876 4554443
Q ss_pred HHhhccC---------------------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-
Q 015768 258 LKVQDNI---------------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG- 315 (400)
Q Consensus 258 ~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~- 315 (400)
....... +.....+..+++..++ +.++++++.+++.++++++++.|++++++++..
T Consensus 339 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~--g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~ 416 (511)
T 3vp6_A 339 NQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK--GTVGFENQINKCLELAEYLYAKIKNREEFEMVFN 416 (511)
T ss_dssp HCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSS
T ss_pred hccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEec
Confidence 2111000 0012345555555555 357788999999999999999999987666654
Q ss_pred --CCCceEEEeeCCCCCC----C----------HHHHHHHHHHhcCeEEeC-CCccCCCCeEEEEec-c-CCHHHHHHHH
Q 015768 316 --GEGAIYLWARLPEKHL----D----------DFEVVRWLAHRHGVVVIP-GGACGCRGHLRISFG-G-LVEDDCKAAA 376 (400)
Q Consensus 316 --~~~~~~~~~~~~~~~~----~----------~~~~~~~l~~~~gi~v~~-g~~~~~~~~iRi~~~-~-~~~~~~~~~~ 376 (400)
|..+.+++.-.|.... + ..++.++|. ++|+.+.. ....+..+++|++++ . ++.+|++.++
T Consensus 417 ~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll 495 (511)
T 3vp6_A 417 GEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLI 495 (511)
T ss_dssp SCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHH
T ss_pred CCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHH
Confidence 4444443322232110 0 235777776 56654432 111122357999984 3 7899999999
Q ss_pred HHHHHHHHHH
Q 015768 377 DRLRRGLEEL 386 (400)
Q Consensus 377 ~~l~~~l~~~ 386 (400)
+.|++.-+++
T Consensus 496 ~~i~~~~~~~ 505 (511)
T 3vp6_A 496 EEIERLGQDL 505 (511)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHHhh
Confidence 9888876554
No 203
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=6.4e-28 Score=227.80 Aligned_cols=285 Identities=19% Similarity=0.222 Sum_probs=201.6
Q ss_pred CCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEecc
Q 015768 67 DEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGP 142 (400)
Q Consensus 67 ~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~ 142 (400)
.++..++++++++++ |.+ +.+++++ +++|+..++. +.++||+|+++.|+|++....+ +..|++++.+ +
T Consensus 66 ~p~~~~l~~~la~~~----g~~-~~i~~~s-G~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v-~ 137 (403)
T 3cog_A 66 NPTRNCLEKAVAALD----GAK-YCLAFAS-GLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFV-D 137 (403)
T ss_dssp CHHHHHHHHHHHHHH----TCS-EEEEESC-HHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEE-C
T ss_pred CchHHHHHHHHHHHh----CCC-cEEEECC-HHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEE-C
Confidence 345567888888877 543 4555554 5699999999 8899999999999998866543 5679999988 6
Q ss_pred CCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC-CEEEEcccccccccCCCCccccCC
Q 015768 143 CSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG-SWLVVDNTYEYFMYDGRKHCCVEG 221 (400)
Q Consensus 143 ~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~-~~li~D~a~~~~~~~~~~~~~~~~ 221 (400)
.+ |++.+++.+++++ ++|++++|+||+|.+++ +++|.++|+++| +++|+|++|..+.+.. + ...
T Consensus 138 ~~------d~~~l~~~i~~~t--~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~-~---~~~ 202 (403)
T 3cog_A 138 CS------KIKLLEAAITPET--KLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR-P---LAL 202 (403)
T ss_dssp TT------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC-T---TTT
T ss_pred CC------CHHHHHHhcCcCC--eEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC-c---ccc
Confidence 54 7899999998655 99999999999999999 999999999999 9999999999765432 1 224
Q ss_pred CcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 222 DHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 222 ~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+.++++.|+||+++.+| .++||++.++ +++.+++.........+.+++.++++...++. +..+.+++.++...
T Consensus 203 ~~div~~S~sK~~~g~~~~~~G~v~~~~--~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~----l~~r~~~~~~n~~~ 276 (403)
T 3cog_A 203 GADISMYSATKYMNGHSDVVMGLVSVNC--ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT----LHVRMEKHFKNGMA 276 (403)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECC--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHH
T ss_pred CCeEEEEcChhhccCCCCCeEEEEEECc--HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----HHHHHHHHHHHHHH
Confidence 67899999999998655 5799999864 68888887766555666788888888888875 33445555556555
Q ss_pred HHHHhccC--------------CCCcccCC----CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeC---CC-------
Q 015768 301 IREALSPL--------------GEGAVKGG----EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIP---GG------- 352 (400)
Q Consensus 301 l~~~L~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~---g~------- 352 (400)
+.+.|++. +...+..+ .++++. +.++. ..+... .++++.||.+.. |.
T Consensus 277 l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~-~~l~~---~~~~~~-~~l~~~~i~~~~~s~G~~~sl~~~ 351 (403)
T 3cog_A 277 VAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVT-FYIKG---TLQHAE-IFLKNLKLFTLAESLGGFESLAEL 351 (403)
T ss_dssp HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEE-EEESS---CHHHHH-HHHHHCSSSEECSCCSSSSCEEEC
T ss_pred HHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEE-EEecC---CHHHHH-HHHHhCCcceEccCCCCcceeeec
Confidence 55555443 22222222 234444 46653 223444 445678886532 21
Q ss_pred ---cc------------C-CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhc
Q 015768 353 ---AC------------G-CRGHLRISFGGLVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 353 ---~~------------~-~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.. + .++++|||++. ++.++.+++|.+++++..+
T Consensus 352 p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~---e~~~d~i~~l~~al~~~~~ 400 (403)
T 3cog_A 352 PAIMTHASVLKNDRDVLGISDTLIRLSVGL---EDEEDLLEDLDQALKAAHP 400 (403)
T ss_dssp TTTTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHHHHCC
T ss_pred ccccccccCCHHHHHhcCCCcCeEEEEeCC---CCHHHHHHHHHHHHHHhhc
Confidence 11 1 15799999997 3445567777777766544
No 204
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.96 E-value=2.3e-28 Score=234.69 Aligned_cols=298 Identities=12% Similarity=0.068 Sum_probs=215.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChH-HHHHHHHHHhcC--CCCEEEEeCCCccchhHHHHhcCcEEEEeccCC--
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGAN-QAFVNIVLTLCD--AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCS-- 144 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t-~a~~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-- 144 (400)
..++.+++.+++++.+|++++ +++|+|+| .++..++.++.. +|+.|+++.++|+++...++..|++++.+ +..
T Consensus 131 ~~~~~~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v-~~~~~ 208 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLV-ETVLD 208 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEE-CCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEE-EEecc
Confidence 456778888899988898876 99999999 566656666544 67889999999999999999999999988 763
Q ss_pred CCCCCCCHHHHHHhh-cc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccc--c
Q 015768 145 SKTLHPDADWLEKTL-ET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCC--V 219 (400)
Q Consensus 145 ~~~~~~~~e~l~~~l-~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~--~ 219 (400)
++++.+|++++++.+ +. ++.+.+|++++|+||+|.+.| +++|.++|+++|+++++|++|+.+..+..+... .
T Consensus 209 ~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~ 285 (456)
T 2z67_A 209 GDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAF 285 (456)
T ss_dssp TTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhh
Confidence 234578999999999 42 233577888899999999999 899999999999999999999866542111110 1
Q ss_pred CCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 220 EGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 220 ~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
..+.++++.|++|+++ ++.++|+++.++ +++++.+...........+.+.+.++...+. .+++++..++..++++
T Consensus 286 ~~~~D~~~~s~hK~~~-~p~g~G~l~~~~--~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~--~~~~~~~~~~~~~~~~ 360 (456)
T 2z67_A 286 KYRVDAVVSSSDKNLL-TPIGGGLVYSTD--AEFIKEISLSYPGRASATPVVNTLVSLLSMG--SKNYLELVKNQKNSKK 360 (456)
T ss_dssp TSCCSEEEEEHHHHHC-CCSSCEEEEESC--HHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCCCcC-CCCCeEEEEEcC--HHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 1145678899999875 568899999964 6777777543322221233445555555553 3567888899999999
Q ss_pred HHHHHhccCC---CCcccCCCCceEEEeeC--CCCCCCHHHHHHHHHHhcCe---EEe------CCCccC--CCCeEEEE
Q 015768 300 IIREALSPLG---EGAVKGGEGAIYLWARL--PEKHLDDFEVVRWLAHRHGV---VVI------PGGACG--CRGHLRIS 363 (400)
Q Consensus 300 ~l~~~L~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~gi---~v~------~g~~~~--~~~~iRi~ 363 (400)
++.+.|++++ +..+..+. +++++.+ +. ...++...|. ++|| .+. +|..|. ..+++|++
T Consensus 361 ~l~~~L~~~~~~~g~~v~~~~--~~v~~~~~~~~---~~~~l~~~L~-~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s 434 (456)
T 2z67_A 361 LLDELLNDLSKKTGGKFLDVE--SPIASCISVNS---DPVEIAAKLY-NLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMN 434 (456)
T ss_dssp HHHHHHHHHHHHSSCCBCCCC--CSSEEEEECSS---CHHHHHHHHH-HTTEESCEEECTTCHHHHTCSSCCSCCEEEEE
T ss_pred HHHHHHHhcccccCCEecCCC--CeEEEEEeccc---HHHHHHHHHH-HcCCCcceEEeecCccccccccccCcchhhhh
Confidence 9999999873 34666665 4455555 32 1467887776 6675 443 122221 34799999
Q ss_pred ecc-CCHHHHHHHHHHHHHHH
Q 015768 364 FGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 364 ~~~-~~~~~~~~~~~~l~~~l 383 (400)
++. ++++++++++++|++++
T Consensus 435 ~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 435 AAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp CCTTCCHHHHHHHHHHHHTC-
T ss_pred hhcCCCHHHHHHHHHHHHHHh
Confidence 986 79999999999998754
No 205
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.96 E-value=1.3e-28 Score=237.79 Aligned_cols=327 Identities=13% Similarity=0.073 Sum_probs=215.5
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCC-----C----CEE
Q 015768 46 KMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDA-----G----DSV 116 (400)
Q Consensus 46 ~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~-----g----d~v 116 (400)
+++++++.+.+..+ ...|+...+..++++++++++ + .+++++|+|+|+|++.++.++.++ | |+|
T Consensus 53 ~~v~~a~~~~l~~~-~~~y~~~~~~~~l~~~la~~~----~--~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~I 125 (467)
T 2oqx_A 53 GAVTQSMQAAMMRG-DEAYSGSRSYYALAESVKNIF----G--YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMV 125 (467)
T ss_dssp SCCCHHHHHHTTSC-CCCSSSCHHHHHHHHHHHHHH----C--CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCE
T ss_pred HHHHHHHHHHhccC-cceeccCchhHHHHHHHHHHh----C--cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceE
Confidence 78888888887654 345766667788888888887 4 378999999999999999999888 8 998
Q ss_pred EEeCCCc-cchhHHHHhcCcEEEEec-----cCC---CCCCCCCHHHHHHhhccC--CCCeEEEEeCCCCCC-ccCCCHH
Q 015768 117 VMFAPYY-FNSYMSFQMTGVTHILVG-----PCS---SKTLHPDADWLEKTLETK--PTPKLVSVVNPGNPS-GTYIPER 184 (400)
Q Consensus 117 lv~~p~~-~~~~~~~~~~g~~~~~~~-----~~~---~~~~~~~~e~l~~~l~~~--~~~~~v~l~~p~npt-G~~~~~~ 184 (400)
++. +.| .++.......|..++... +.+ +..+.+|+++|++.+++. ..+++|++++|+||+ |.+++.+
T Consensus 126 i~~-~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~ 204 (467)
T 2oqx_A 126 AFS-NYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLA 204 (467)
T ss_dssp EEE-SSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHH
T ss_pred Eec-ccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHH
Confidence 877 444 333444555666655430 111 123467999999999741 124999999999997 8999999
Q ss_pred HHHHHHHHHHHcCCEEEEcccccc-c---------ccCCCCccccC----CCcEEEEeccccccCCC-cceeEEEEccCC
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEY-F---------MYDGRKHCCVE----GDHVVNLFSFSKAYGMM-GWRVGYIAYPSE 249 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~-~---------~~~~~~~~~~~----~~~~i~~~s~sK~~g~~-g~~~G~i~~~~~ 249 (400)
++++|.++|++||+++|+|+++.. . .+.+....... ...++++.|+||++|++ | ||+++++.
T Consensus 205 ~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G---g~~~~~~~ 281 (467)
T 2oqx_A 205 NLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG---GLLCMKDD 281 (467)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC---EEEEECSG
T ss_pred HHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc---eEEEecCh
Confidence 999999999999999999977654 1 22222111110 11235678999999765 3 78887742
Q ss_pred -cHHHHHHHHHhh--cc--CCc-CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCCCceEEE
Q 015768 250 -VEGFATQLLKVQ--DN--IPI-CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGEGAIYLW 323 (400)
Q Consensus 250 -~~~~~~~l~~~~--~~--~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 323 (400)
..+...++.... .. ..+ ..+.....++...++...+ ++..++..++++++.+.|++++ +.+. +.+++++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~--~~~~~~~~~~~~~l~~~L~~~~-~~~~-~~~~~~~~ 357 (467)
T 2oqx_A 282 SFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN--LDWLAYRIAQVQYLVDGLEEIG-VVCQ-QAGGHAAF 357 (467)
T ss_dssp GGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTT-CCEE-EECSSCEE
T ss_pred hHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh--HHHHHHHHHHHHHHHHHHHHCC-Ceee-cCCceEEE
Confidence 113444444332 11 111 1233333333333322111 1234455677888888888774 4555 66678888
Q ss_pred eeCCC--CCCC-----HHHHHHHHHHhcCeEEeCCCcc--C-----------CCCeEEEEecc--CCHHHHHHHHHHHHH
Q 015768 324 ARLPE--KHLD-----DFEVVRWLAHRHGVVVIPGGAC--G-----------CRGHLRISFGG--LVEDDCKAAADRLRR 381 (400)
Q Consensus 324 ~~~~~--~~~~-----~~~~~~~l~~~~gi~v~~g~~~--~-----------~~~~iRi~~~~--~~~~~~~~~~~~l~~ 381 (400)
+.++. ...+ ..++..+|+.++||.+.|+..| + ..+++|++++. ++++++++++++|++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~ 437 (467)
T 2oqx_A 358 VDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKH 437 (467)
T ss_dssp EEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHH
T ss_pred EechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHH
Confidence 88742 1112 3445777746899999985532 1 13799999984 589999999999999
Q ss_pred HHHHHh
Q 015768 382 GLEELV 387 (400)
Q Consensus 382 ~l~~~~ 387 (400)
++++..
T Consensus 438 ~l~~~~ 443 (467)
T 2oqx_A 438 VKENAA 443 (467)
T ss_dssp HHHSGG
T ss_pred HHhhhh
Confidence 998754
No 206
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.3e-27 Score=230.93 Aligned_cols=331 Identities=11% Similarity=0.045 Sum_probs=240.8
Q ss_pred cHHHHHH-HHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC----------cEEEeCChHHHHHHHHHHhcC--
Q 015768 45 PKMAMEK-VKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS----------SVMVTAGANQAFVNIVLTLCD-- 111 (400)
Q Consensus 45 ~~~v~~a-~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~----------~i~~~~g~t~a~~~~~~~l~~-- 111 (400)
++.++.. +...+.. ....|...++..++++++.+++.+.+|.+.. ..++|+|+|+++..++.+.+.
T Consensus 91 ~~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~ 169 (481)
T 4e1o_A 91 WPSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNK 169 (481)
T ss_dssp HHHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHH
Confidence 4455544 4555444 4567777788899999999999999998643 679999999999998887642
Q ss_pred -----------------CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEE
Q 015768 112 -----------------AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSV 170 (400)
Q Consensus 112 -----------------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l 170 (400)
+++.|+++.++|.++...++..|.+++.+ |.++ ++.+|+++|++.|++. ..+.+|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v-~~~~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~ 247 (481)
T 4e1o_A 170 ILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFL-PVDD-NFSLRGEALQKAIEEDKQRGLVPVFVCA 247 (481)
T ss_dssp HHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEE-CCCT-TSCCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEE-EcCC-CCcCCHHHHHHHHHHHHhCCCCcEEEEE
Confidence 56799999999999999999899999999 8864 4589999999999743 11477888
Q ss_pred eCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCC---CcEEEEeccccccCCCcceeEEEEcc
Q 015768 171 VNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEG---DHVVNLFSFSKAYGMMGWRVGYIAYP 247 (400)
Q Consensus 171 ~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~---~~~i~~~s~sK~~g~~g~~~G~i~~~ 247 (400)
+.++|++|.+.| +++|+++|++||+++++|++|+.+............ ..+.++.++||+++.| ..+|+++.+
T Consensus 248 ~~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~~ 323 (481)
T 4e1o_A 248 TLGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVH-FDCTGFWVK 323 (481)
T ss_dssp EBSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEES
T ss_pred ecCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCC-CceEEEEEe
Confidence 889999999988 999999999999999999999876543222211111 2367788999999744 567887777
Q ss_pred CCcHHHHHHHHH----hhcc---------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768 248 SEVEGFATQLLK----VQDN---------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL 308 (400)
Q Consensus 248 ~~~~~~~~~l~~----~~~~---------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (400)
+ +........ +... .+.....+.++++...+. .+.++++.++..++++++++.|+++
T Consensus 324 ~--~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~ 399 (481)
T 4e1o_A 324 D--KYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG--VKNLQAHVRHGTEMAKYFESLVRND 399 (481)
T ss_dssp B--HHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred C--HHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5 444322110 0000 000113455666665553 4667889999999999999999998
Q ss_pred CCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcC-eEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHH
Q 015768 309 GEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHG-VVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-i~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~ 385 (400)
+++++..+....+++++++.......++.++|. +.| +.+.|+. ..+..++|++++. ++++|++.++++|++++++
T Consensus 400 ~g~~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~-~~g~~~~~~~~-~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 400 PSFEIPAKRHLGLVVFRLKGPNSLTENVLKEIA-KAGRLFLIPAT-IQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp TTEECCSCCCSSEEEEEESSCHHHHHHHHHHHH-HHCSSBCEEEE-ETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCceeEEEEEeCCchHHHHHHHHHHH-hCCeEEEEeeE-ECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 776776555577778887542223567888776 455 5555433 2345789999775 5899999999999999987
Q ss_pred Hhc
Q 015768 386 LVK 388 (400)
Q Consensus 386 ~~~ 388 (400)
+.+
T Consensus 478 l~~ 480 (481)
T 4e1o_A 478 ILS 480 (481)
T ss_dssp HHT
T ss_pred Hhh
Confidence 653
No 207
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.96 E-value=6.7e-27 Score=220.62 Aligned_cols=310 Identities=13% Similarity=0.101 Sum_probs=220.9
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCC--cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCC
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEG--LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-CDAGDSVVMFAP 121 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g--~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-~~~gd~vlv~~p 121 (400)
++++++++.+.+.++ |.+..| ..++++++++++ |. +++++++|+++|++.++.++ .++||+|+++.|
T Consensus 11 ~~~v~~a~~~~~~~~----~~~~~g~~~~~l~~~la~~~----~~--~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~ 80 (394)
T 1o69_A 11 GGNELKYIEEVFKSN----YIAPLGEFVNRFEQSVKDYS----KS--ENALALNSATAALHLALRVAGVKQDDIVLASSF 80 (394)
T ss_dssp -CCHHHHHHHHHHHT----TTSCTTHHHHHHHHHHHHHH----CC--SEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred CHHHHHHHHHHHHcC----CccCCChHHHHHHHHHHHHh----CC--CcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCC
Confidence 467888888887642 444456 788888888887 43 78999999999999999999 899999999999
Q ss_pred CccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015768 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (400)
Q Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (400)
+|+++...++..|++++.+ +.+ +++.+|++.+++.+++.. .+++|++++ |+|...+ +++|.++|+++|+++
T Consensus 81 ~~~~~~~~~~~~g~~~~~v-~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~~l 152 (394)
T 1o69_A 81 TFIASVAPICYLKAKPVFI-DCD-ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKENDIVL 152 (394)
T ss_dssp SCGGGTHHHHHTTCEEEEE-CBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTCEE
T ss_pred ccHHHHHHHHHcCCEEEEE-EeC-CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcCCEE
Confidence 9999999999999999999 887 456789999999987521 248998875 8998888 899999999999999
Q ss_pred EEccccc-ccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCC-----c--------
Q 015768 201 VVDNTYE-YFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIP-----I-------- 266 (400)
Q Consensus 201 i~D~a~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~-----~-------- 266 (400)
|+|++|+ ++.+.+..... ..+.++...|.+|.++ |.++||+++++ +++++.+........ +
T Consensus 153 i~Dea~~~g~~~~~~~~~~-~~~~~~~s~s~~K~l~--~~~~G~~~~~~--~~l~~~l~~~~~~~~~~~~~~~~~~~g~~ 227 (394)
T 1o69_A 153 IEDAAEALGSFYKNKALGT-FGEFGVYSYNGNKIIT--TSGGGMLIGKN--KEKIEKARFYSTQARENCLHYEHLDYGYN 227 (394)
T ss_dssp EEECTTCTTCEETTEETTS-SSSEEEEECCTTSSSC--CSSCEEEEESC--HHHHHHHHHHTBTCCCSSSSCCCSSCCCB
T ss_pred EEECcCcccceeCCccccc-ccCcEEEEEeCCccCC--CCCceEEEECC--HHHHHHHHHHHHhccccCccccccccCcc
Confidence 9999998 44444322111 1234455555578664 66899999964 678888776543211 0
Q ss_pred -CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----Cce-EEEeeCCCC-----------
Q 015768 267 -CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAI-YLWARLPEK----------- 329 (400)
Q Consensus 267 -~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~-~~~~~~~~~----------- 329 (400)
..+.....++...++ ++++..++.+++++++.+.|+++ +.+.++. .++ ++++.++..
T Consensus 228 ~~~~~~~aa~~l~~l~----~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 301 (394)
T 1o69_A 228 YRLSNVLGAIGVAQME----VLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDI 301 (394)
T ss_dssp CBCCHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEE
T ss_pred cCcCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccc
Confidence 022233333322333 35667788899999999999887 3444331 122 356666532
Q ss_pred ---------CCCHHHHHHHHHHhcCeEEeCCCccC------CC--------------CeEEEEecc-CCHHHHHHHHHHH
Q 015768 330 ---------HLDDFEVVRWLAHRHGVVVIPGGACG------CR--------------GHLRISFGG-LVEDDCKAAADRL 379 (400)
Q Consensus 330 ---------~~~~~~~~~~l~~~~gi~v~~g~~~~------~~--------------~~iRi~~~~-~~~~~~~~~~~~l 379 (400)
..+.+++...|. ++||.+++|..+. .. ..+|+..+. +|++|++.+++.|
T Consensus 302 ~~~~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l 380 (394)
T 1o69_A 302 NISQKNITLHPKISKLIEDLK-NKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLI 380 (394)
T ss_dssp ECCCCCCCCCHHHHHHHHHHH-HTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred cccccccccccCHHHHHHHHH-HcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHH
Confidence 114567887775 7899999985331 00 345555555 8999999999988
Q ss_pred HHHHH
Q 015768 380 RRGLE 384 (400)
Q Consensus 380 ~~~l~ 384 (400)
++++.
T Consensus 381 ~~~~~ 385 (394)
T 1o69_A 381 LKSIK 385 (394)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 87654
No 208
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.96 E-value=9.9e-28 Score=231.12 Aligned_cols=334 Identities=10% Similarity=0.008 Sum_probs=239.2
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCC---------cEEEeCChHHHHHHHHHHhcC---
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKS---------SVMVTAGANQAFVNIVLTLCD--- 111 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~---------~i~~~~g~t~a~~~~~~~l~~--- 111 (400)
.++.++..+.....+.....|...++..++++++.+++.+.+|.+.+ ..++|+|+|+++..++.+.+.
T Consensus 85 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~ 164 (475)
T 3k40_A 85 SYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKL 164 (475)
T ss_dssp CHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHH
Confidence 34455544444444444566777788889999999999999998753 689999999999988887631
Q ss_pred ----------------CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC----CCCeEEEEe
Q 015768 112 ----------------AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK----PTPKLVSVV 171 (400)
Q Consensus 112 ----------------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~----~~~~~v~l~ 171 (400)
+++.|+++..+|.++...++..|++++.+ |.++++ +|+++|++.|++. ..+.+|+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v-~~d~~~--~d~~~L~~~i~~~~~~~~~~~~v~~~ 241 (475)
T 3k40_A 165 KEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSV-QSENHR--MRGAALEKAIEQDVAEGLIPFYAVVT 241 (475)
T ss_dssp HHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEE-CCBTTB--CCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEE-ECCCCC--cCHHHHHHHHHHHHHCCCccEEEEEE
Confidence 34689999999999999999999999999 887654 8999999999743 114678888
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccC---CCcEEEEeccccccCCCcceeEEEEccC
Q 015768 172 NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE---GDHVVNLFSFSKAYGMMGWRVGYIAYPS 248 (400)
Q Consensus 172 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~---~~~~i~~~s~sK~~g~~g~~~G~i~~~~ 248 (400)
.++|++|.+.| +++|+++|++||+++++|++|+.+........... ...+.+..++||+++ .+..+|+++.++
T Consensus 242 ~~~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~~ 317 (475)
T 3k40_A 242 LGTTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWML-VNFDCSAMWLKD 317 (475)
T ss_dssp BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS-CCSSCEEEEESS
T ss_pred ecCCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccC-CCCceEEEEEeC
Confidence 99999999988 99999999999999999999987543222211111 134678889999986 446678887775
Q ss_pred CcHHHH-HHHHH---hhcc---------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCC
Q 015768 249 EVEGFA-TQLLK---VQDN---------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLG 309 (400)
Q Consensus 249 ~~~~~~-~~l~~---~~~~---------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (400)
++.. +.+.. +... .+.....+.++++...+. .+.++++.++..++++++++.|++++
T Consensus 318 --~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~ 393 (475)
T 3k40_A 318 --PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG--VENLQAHIRRHCNFAKQFGDLCVADS 393 (475)
T ss_dssp --GGGC---------------------------CCCGGGTHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred --HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3221 21110 0000 000112444555555553 45678888999999999999999987
Q ss_pred CCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc--CCHHHHHHHHHHHHHHHHHHh
Q 015768 310 EGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG--LVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~--~~~~~~~~~~~~l~~~l~~~~ 387 (400)
++++..+....+++++++.......++..+|.++.++.+.|+.. .+..++|++++. ++++|++.++++|+++++++.
T Consensus 394 g~~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~ 472 (475)
T 3k40_A 394 RFELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKI-KDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEME 472 (475)
T ss_dssp TEEESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEE-TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 76776655567777777542223567888887544445555433 346799999775 589999999999999998876
Q ss_pred cc
Q 015768 388 KD 389 (400)
Q Consensus 388 ~~ 389 (400)
++
T Consensus 473 ~~ 474 (475)
T 3k40_A 473 QE 474 (475)
T ss_dssp TC
T ss_pred cc
Confidence 53
No 209
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.96 E-value=6.8e-27 Score=223.61 Aligned_cols=324 Identities=15% Similarity=0.098 Sum_probs=226.0
Q ss_pred CCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 29 AKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 29 ~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
++++|+|+... .++++++++.+.+... .|.+..+..++++++++++ |.+ ++++++++|+|+..++.+
T Consensus 30 ~~~~i~~~~~~----~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----g~~--~~i~~~sGt~a~~~al~~ 96 (437)
T 3bb8_A 30 GKSVVPPSGKV----IGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYL----GVP--YVLTTTSGSSANLLALTA 96 (437)
T ss_dssp TTSCBCSCCCC----CCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHH
T ss_pred CCccccCCCCC----CCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHH----CCC--cEEEeCCHHHHHHHHHHH
Confidence 45566665432 3578889988887642 2445566788888888887 543 688889999999999999
Q ss_pred h---------cCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCcc
Q 015768 109 L---------CDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGT 179 (400)
Q Consensus 109 l---------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~ 179 (400)
+ .++||+|+++.|+|+++...++..|++++.+ +.+++++.+|++.+++.+++++ ++|++++ ++|.
T Consensus 97 l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~---~~g~ 170 (437)
T 3bb8_A 97 LTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFV-DVDIPTYNVNASLIEAAVSDKT--KAIMIAH---TLGN 170 (437)
T ss_dssp TTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEEC-CEETTTTEECGGGHHHHCCTTE--EEEEEEC---GGGC
T ss_pred hhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEE-eccCccCCcCHHHHHHhcCCCC--eEEEEeC---CCCC
Confidence 8 7899999999999999999999999999999 8776556789999999997655 8998874 3455
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHH
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~ 259 (400)
..+ +++|.++|+++|+++|+|++|+.+....... ...-.++++.|++|..+++|.++|+++.++ +.+.+.+..
T Consensus 171 ~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~--~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~--~~~~~~~~~ 243 (437)
T 3bb8_A 171 LFD---LAEVRRVADKYNLWLIEDCCDALGSTYDGKM--AGTFGDIGTVSFYPAKHITMGEGGAVFTQS--AELKSIIES 243 (437)
T ss_dssp CCC---HHHHHHHHHHHTCEEEEECTTCTTCEETTEE--TTSSSSEEEEECSTTSSSCCSSCEEEEESC--HHHHHHHHH
T ss_pred hhc---HHHHHHHHHHcCCEEEEECccccCceECCee--cccccCEEEEECcCCcCCCCCCeEEEEeCC--HHHHHHHHH
Confidence 567 8999999999999999999998443211111 111124777888877777888899999884 333333322
Q ss_pred hh---cc------------------------------------CCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 260 VQ---DN------------------------------------IPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 260 ~~---~~------------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
.. .. .++..+.+...++...|+. +.+..++.+++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~----~~~~~~~~~~~~~~ 319 (437)
T 3bb8_A 244 FRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER----IEEFVEKRKANFKY 319 (437)
T ss_dssp HHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred HHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH----HHHHHHHHHHHHHH
Confidence 11 00 0112345555555555542 35556666788889
Q ss_pred HHHHhccCCCCcccCCC------C-ceEE-EeeCCCCCCCHHHHHHHHHHhcCeEEeCCCc--cC-C-------------
Q 015768 301 IREALSPLGEGAVKGGE------G-AIYL-WARLPEKHLDDFEVVRWLAHRHGVVVIPGGA--CG-C------------- 356 (400)
Q Consensus 301 l~~~L~~~~~~~~~~~~------~-~~~~-~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~--~~-~------------- 356 (400)
+.+.|+++++..+.+.. + .+|. .+..+. ..+.+++...|. ++||.++++.. +. .
T Consensus 320 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~-~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~ 397 (437)
T 3bb8_A 320 LKDALQSCADFIELPEATENSDPSWFGFPITLKEDS-GVSRIDLVKFLD-EAKVGTRLLFAGNLTRQPYFHDVKYRVVGE 397 (437)
T ss_dssp HHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGG-SSCHHHHHHHHH-HTTBCCBCCTTSSGGGSGGGSSCCCEECSC
T ss_pred HHHHhhccCCccccCCCCCCCceeeEEEEEEECCcC-cCcHHHHHHHHH-HCCCceeccCCcccccCchhhccCccccCC
Confidence 99999987543333211 1 1233 244431 135788888875 78999988754 11 0
Q ss_pred --------CCeEEEEecc-CCHHHHHHHHHHHHHHHH
Q 015768 357 --------RGHLRISFGG-LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 357 --------~~~iRi~~~~-~~~~~~~~~~~~l~~~l~ 384 (400)
.+.+|++++. +|++|++.+++.|+++++
T Consensus 398 ~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 398 LTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp CHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 1249999988 899999999999987754
No 210
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.96 E-value=9.6e-28 Score=227.43 Aligned_cols=285 Identities=19% Similarity=0.133 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhH----HHHhcCcEEEEeccCCCCC
Q 015768 72 ELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYM----SFQMTGVTHILVGPCSSKT 147 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~ 147 (400)
...+++.+.+++..|. +..++++++++|+..++.++.++||+|+++.|+|.++.. .++..|++++.+ +.+
T Consensus 82 p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v-~~~--- 155 (430)
T 3ri6_A 82 PTVEDLEQRLKNLTGA--LGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV-DVM--- 155 (430)
T ss_dssp HHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE-CTT---
T ss_pred HHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe-CCC---
Confidence 4444555555555564 346777788899999999999999999999999998887 667889999998 654
Q ss_pred CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
|++++++.+++++ ++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+..... .....+.++++
T Consensus 156 ---d~~~l~~ai~~~t--~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~~~~g~div~ 223 (430)
T 3ri6_A 156 ---DSLAVEHACDETT--KLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EAKRLGVDIEV 223 (430)
T ss_dssp ---CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CGGGGTCSEEE
T ss_pred ---CHHHHHHhhCCCC--eEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----ChHHcCCEEEE
Confidence 7899999998765 99999999999999999 889999999999999999999854431 22234567999
Q ss_pred eccccccCCCcce-eEEEEccCC--c------HH---------HHHHHHH-hhccCCcCccHHHHHHHHHHhcCCcHHHH
Q 015768 228 FSFSKAYGMMGWR-VGYIAYPSE--V------EG---------FATQLLK-VQDNIPICASIISQHLALYSLQTGPEWVT 288 (400)
Q Consensus 228 ~s~sK~~g~~g~~-~G~i~~~~~--~------~~---------~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 288 (400)
.|+||++|.+|.. .|+++.+.+ . ++ ++.++.. ........+++...+.+...+ +.+.
T Consensus 224 ~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l----~~l~ 299 (430)
T 3ri6_A 224 LSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL----ETMA 299 (430)
T ss_dssp EECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH----HHHH
T ss_pred ECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh----hhHH
Confidence 9999999755544 455553221 1 11 1222221 111223334555544444444 3466
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCc-ccCCC----------------CceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCC
Q 015768 289 ERVKDLVRNREIIREALSPLGEGA-VKGGE----------------GAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPG 351 (400)
Q Consensus 289 ~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 351 (400)
.+.++..+++..+.+.|++.+.+. +..|. +++++++.++. ..+..++++.+ +-.++.+.+|
T Consensus 300 ~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~-~~~~~~~~~~l-~~~~~~~s~G 377 (430)
T 3ri6_A 300 LRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES-KEASYRFMDAL-KLIRRATNIH 377 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-HHHHHHHHHHC-SSSEECSCCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-HHHHHHHHHhC-CcceecCCCC
Confidence 777888899999999999887654 33332 34488999972 22344555544 3456666777
Q ss_pred CccC-----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 352 GACG-----------------------CRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 352 ~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
..+. .++.||+|++. |+.+++++.|++++
T Consensus 378 ~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~---E~~~dl~~dl~~al 429 (430)
T 3ri6_A 378 DNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI---EEIEDLKEDILQAL 429 (430)
T ss_dssp CSSCEEECTGGGC---------CGGGSCTTEEEEECCS---SCHHHHHHHHHHHH
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc---CCHHHHHHHHHHhh
Confidence 6553 25689999997 55566777777765
No 211
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.96 E-value=2.9e-27 Score=223.42 Aligned_cols=282 Identities=15% Similarity=0.063 Sum_probs=191.9
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCCCC
Q 015768 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSKTL 148 (400)
Q Consensus 73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~ 148 (400)
..+++++.+++..|. ++.++++|+++|++.++.+++++||+|+++.+.|++....+ +..|+++.++ +.+
T Consensus 83 ~~~~le~~lA~l~g~--~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v-~~~---- 155 (415)
T 2fq6_A 83 THFSLQQAMCELEGG--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWF-DPL---- 155 (415)
T ss_dssp HHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE-CTT----
T ss_pred hHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEE-CCC----
Confidence 334444444444464 45777789999999999999999999999999999887654 4579999888 543
Q ss_pred CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEE
Q 015768 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~ 226 (400)
|++++++++++++ ++|++++|+||+|.++| +++|+++|++ +|+++|+|++|+.+... .+ ...+.+++
T Consensus 156 --d~~~le~ai~~~t--klV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~-~p---~~~g~Div 224 (415)
T 2fq6_A 156 --IGADIVKHLQPNT--KIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF-KA---LDFGIDVS 224 (415)
T ss_dssp --CGGGGGGGCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS-CG---GGGTCSEE
T ss_pred --CHHHHHHhhccCC--cEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC-Cc---cccCCeEE
Confidence 7889999998765 99999999999999999 8999999999 99999999999855322 11 23456799
Q ss_pred EeccccccCCCcce-eEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHh
Q 015768 227 LFSFSKAYGMMGWR-VGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREAL 305 (400)
Q Consensus 227 ~~s~sK~~g~~g~~-~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L 305 (400)
+.|+||.+|.+|.+ +||++.+ +++++++..........+++...+.+...++ .+..+.++..++...+.+.|
T Consensus 225 ~~S~sK~lg~~g~~~~G~l~~~---~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~----~l~~r~~~~~~n~~~l~~~L 297 (415)
T 2fq6_A 225 IQAATKYLVGHSDAMIGTAVCN---ARCWEQLRENAYLMGQMVDADTAYITSRGLR----TLGVRLRQHHESSLKVAEWL 297 (415)
T ss_dssp EEETTTTTTCSSSCCCEEEEEC---TTTHHHHHHHHHHTTCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCccccCCCCCceEEEEEeC---HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh----HHHHHHHHHHHHHHHHHHHH
Confidence 99999999866644 6999887 4566666655443333445554444444443 35666777788888888888
Q ss_pred ccCCCCc-ccCC----------------CCceEEEeeCCCC--CCCHHHHHHHHHHhcCeEEeCCCc-------------
Q 015768 306 SPLGEGA-VKGG----------------EGAIYLWARLPEK--HLDDFEVVRWLAHRHGVVVIPGGA------------- 353 (400)
Q Consensus 306 ~~~~~~~-~~~~----------------~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~------------- 353 (400)
++.+.+. +..| ..+..+++.++.. ..+...+...+ +-.++.+..|+.
T Consensus 298 ~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l-~~~~~a~s~G~~~s~~~~~~p~~~s 376 (415)
T 2fq6_A 298 AEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNF-SLFSMAYSWGGYESLILANQPEHIA 376 (415)
T ss_dssp HTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTC-SSCEECSCCCSSSCEEEEECHHHHH
T ss_pred HcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhC-CcCeEeccCCCCceeEEecCCCccc
Confidence 8765321 1111 1356677788642 11223333322 223455554522
Q ss_pred -------cC-CCCeEEEEecc-CCHHHHHHHHHHHH
Q 015768 354 -------CG-CRGHLRISFGG-LVEDDCKAAADRLR 380 (400)
Q Consensus 354 -------~~-~~~~iRi~~~~-~~~~~~~~~~~~l~ 380 (400)
.+ .++.+|||++. .++++++++.+.|+
T Consensus 377 ~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~ 412 (415)
T 2fq6_A 377 AIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA 412 (415)
T ss_dssp TTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHH
T ss_pred cccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 11 24789999998 44454444444443
No 212
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.96 E-value=6.2e-27 Score=220.35 Aligned_cols=286 Identities=20% Similarity=0.154 Sum_probs=205.7
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-----hcCcEEEEeccCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-----MTGVTHILVGPCS 144 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-----~~g~~~~~~~~~~ 144 (400)
.....+++++.+++..|. ++.++++++++|+.. +..+.++||+|+++.++|.+....+. ..|++++.+ +.+
T Consensus 65 ~~p~~~~l~~~la~l~g~--~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v-~~~ 140 (400)
T 3nmy_A 65 HNPTRFAYERCVAALEGG--TRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV-DLT 140 (400)
T ss_dssp CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE-CTT
T ss_pred CCHHHHHHHHHHHHHhCC--CCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE-CCC
Confidence 344555566666655564 367788888999998 56788999999999999987776644 459999888 653
Q ss_pred CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcE
Q 015768 145 SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHV 224 (400)
Q Consensus 145 ~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~ 224 (400)
|++.+++.+++++ ++|++++|+||+|.+.+ +++|.++|++||+++|+|++|+.+..... ...+.+
T Consensus 141 ------d~~~l~~~i~~~~--~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~~----~~~g~d 205 (400)
T 3nmy_A 141 ------DPAAFKAAIRADT--KMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQRP----LSLGAD 205 (400)
T ss_dssp ------SHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCCG----GGGTCS
T ss_pred ------CHHHHHHHhccCC--CEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCCh----hhcCCc
Confidence 7899999998765 99999999999999999 99999999999999999999986544321 223567
Q ss_pred EEEeccccccCCCcceeEE--EEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 015768 225 VNLFSFSKAYGMMGWRVGY--IAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIR 302 (400)
Q Consensus 225 i~~~s~sK~~g~~g~~~G~--i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 302 (400)
+++.|++|+++.+|.++|. ++..+ +++.+++.......+...++...+++...++. +..+.+++.+++..+.
T Consensus 206 iv~~S~sK~l~g~g~~~gG~~vv~~~--~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~----l~~r~~~~~~~a~~l~ 279 (400)
T 3nmy_A 206 LVVHSATKYLNGHSDMVGGIAVVGDN--AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT----LPLRMRAHCENALALA 279 (400)
T ss_dssp EEEEETTTTTTCSSSCCCEEEEECSC--HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHH
T ss_pred EEEecCccccCCCCCcceeEEEEeCC--HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH----HHHHHHHHHHHHHHHH
Confidence 9999999999867666544 55544 78888887776656667788877777777765 5667778888999999
Q ss_pred HHhccCCCCc-ccCC----------------CCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC----------
Q 015768 303 EALSPLGEGA-VKGG----------------EGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG---------- 355 (400)
Q Consensus 303 ~~L~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---------- 355 (400)
+.|++.+.+. +..| ..|.++++.++.......++...+ +-.++.+..|..+.
T Consensus 280 ~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l-~~~~~~~s~G~~~sl~~~p~~~~~ 358 (400)
T 3nmy_A 280 QWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKT-ELFTLAESLGGVESLVNHPAVMTH 358 (400)
T ss_dssp HHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTT
T ss_pred HHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcC-CcceEecCCCCCcceeeCcccccc
Confidence 9999876532 2222 126678888864211123344333 23344444444321
Q ss_pred -------------CCCeEEEEeccCCHHHHHHHHHHHHHHHH
Q 015768 356 -------------CRGHLRISFGGLVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 356 -------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l~ 384 (400)
.++.+|+|++. |+.+++++.|++++.
T Consensus 359 ~~~~~~~~~~~gi~~~liRlsvGl---e~~~dli~dl~~al~ 397 (400)
T 3nmy_A 359 ASIPVARREQLGISDALVRLSVGI---EDLGDLRGDLERALV 397 (400)
T ss_dssp TTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHHC
T ss_pred ccCCHHHHHhcCCCcCeEEEEeCc---CCHHHHHHHHHHHHh
Confidence 24689999997 455566777887775
No 213
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.96 E-value=8.1e-28 Score=231.66 Aligned_cols=339 Identities=12% Similarity=0.070 Sum_probs=230.0
Q ss_pred hcCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCC---CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHH
Q 015768 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDP---SISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQ 100 (400)
Q Consensus 27 ~~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~ 100 (400)
.+|+.++||..|.. .++ .+|++++++.+.+... ....|+. ....++++++++++.+..+...+++++++|+++
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGse 138 (472)
T 1ohv_A 60 VDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPKGMSQLITMACGSC 138 (472)
T ss_dssp TTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHH
T ss_pred CCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchh
Confidence 45788999988763 344 6899999998876421 1123432 345789999999888776556789999999999
Q ss_pred HHHHHHHHhc--------C-----------------CC---CEEEEeCCCccchhHHH-HhcCcE-------------EE
Q 015768 101 AFVNIVLTLC--------D-----------------AG---DSVVMFAPYYFNSYMSF-QMTGVT-------------HI 138 (400)
Q Consensus 101 a~~~~~~~l~--------~-----------------~g---d~vlv~~p~~~~~~~~~-~~~g~~-------------~~ 138 (400)
|++.+++++. . || +.|++.+++|++..... ...|.. .+
T Consensus 139 A~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 218 (472)
T 1ohv_A 139 SNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIA 218 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEE
T ss_pred HHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCccc
Confidence 9999998873 1 45 89999999999876544 333321 11
Q ss_pred EeccCCCCC------C-----CCCHHHHHHhhccC----CCCeEEEEeCCCCCCcc-CCCHHHHHHHHHHHHHcCCEEEE
Q 015768 139 LVGPCSSKT------L-----HPDADWLEKTLETK----PTPKLVSVVNPGNPSGT-YIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 139 ~~~~~~~~~------~-----~~~~e~l~~~l~~~----~~~~~v~l~~p~nptG~-~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
.+ |..... + ..|+++|++.+++. ..+++|+++..+|++|. ..+.+++++|.++|++||+++|+
T Consensus 219 ~~-p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~ 297 (472)
T 1ohv_A 219 PF-PRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLV 297 (472)
T ss_dssp CC-CCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CC-CcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 22 211000 0 12578888888741 12488888777888996 57899999999999999999999
Q ss_pred cccccccccCCCCccccCCCcE--EEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHh
Q 015768 203 DNTYEYFMYDGRKHCCVEGDHV--VNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSL 280 (400)
Q Consensus 203 D~a~~~~~~~~~~~~~~~~~~~--i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 280 (400)
||+|.++...+........+.. +.+.|+||++ ++| ||++ + +++. .+.......+++.+++++.++.++|
T Consensus 298 DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~-l~G---G~~~-~---~~~~-~~~~~~~~~T~~~~~~~~aaa~aal 368 (472)
T 1ohv_A 298 DEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKM-MTG---GFFH-K---EEFR-PNAPYRIFNTWLGDPSKNLLLAEVI 368 (472)
T ss_dssp ECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGG-SSE---EEEE-C---GGGS-CSSSSSSCCSSSSCHHHHHHHHHHH
T ss_pred eCcccCCCCCCCchhccccCCCCCCCEEEEcccc-ccC---CccC-c---hhhc-ccccccccCccCccHHHHHHHHHHH
Confidence 9999876554432111111211 2244889994 235 7776 4 3432 1222333456778899999888888
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHhccC----CC-CcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEeCCCccC
Q 015768 281 QTGPEWVTERVKDLVRNREIIREALSPL----GE-GAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVIPGGACG 355 (400)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 355 (400)
+...+ ..+.++++++++++++.|+++ +. +....+. +.++++.++.. .+..+++.+|+ ++||.+.|+.
T Consensus 369 ~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~-g~~~~~~~~~~-~~~~~~~~~l~-~~Gv~~~~~g--- 440 (472)
T 1ohv_A 369 NIIKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFDTPDE-SIRNKLISIAR-NKGVMLGGCG--- 440 (472)
T ss_dssp HHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEECSSH-HHHHHHHHHHH-HTTEECEEET---
T ss_pred HHHHh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCC-ceEEEEEeCCh-hHHHHHHHHHH-HCCeEEecCC---
Confidence 64211 245567777777787777654 31 2224454 56667777532 13567888887 6899998852
Q ss_pred CCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 356 CRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 356 ~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
.+++||+++. ++++++++++++|++++++
T Consensus 441 -~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 441 -DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp -TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 5799998886 8999999999999999875
No 214
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.95 E-value=1e-25 Score=212.31 Aligned_cols=307 Identities=15% Similarity=0.125 Sum_probs=218.2
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHh-------cCCCCEE
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTL-------CDAGDSV 116 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l-------~~~gd~v 116 (400)
.++++++++.+.+.+. .|.+..+..++++++++++ |.+ ++++++++|+|++.++.++ .++||+|
T Consensus 13 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~----~~~--~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~V 83 (390)
T 3b8x_A 13 WDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTF----GSK--YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEI 83 (390)
T ss_dssp CCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHH----TCS--EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEE
T ss_pred CCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHH----CCC--cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEE
Confidence 5689999998888653 3545666788888888887 543 6788888889999999999 7899999
Q ss_pred EEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 117 VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 117 lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
+++.++|+++...++..|++++.+ +.+++++.+|++++++.+++++ ++|++++ ++|...+ +++|.++|++|
T Consensus 84 i~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~d~~~l~~~i~~~~--~~v~~~~---~~g~~~~---~~~i~~l~~~~ 154 (390)
T 3b8x_A 84 IVPAVSWSTTYYPLQQYGLRVKFV-DIDINTLNIDIESLKEAVTDST--KAILTVN---LLGNPNN---FDEINKIIGGR 154 (390)
T ss_dssp EEESSSCHHHHHHHHHTTCEEEEE-CBCTTTCSBCHHHHHHHCCTTE--EEEEEEC---GGGCCCC---HHHHHHHHTTS
T ss_pred EECCCCcHHHHHHHHHcCCEEEEE-ecCccccCcCHHHHHHHhCcCC--eEEEEEC---CccChhh---HHHHHHHHHHc
Confidence 999999999999999999999999 8887656889999999998654 8888874 5677777 99999999999
Q ss_pred CCEEEEcccccccccCCCCccccCCCcEEEEec--cccccCCCcceeEEEEccCCcHHHHHHHHHhhccC----------
Q 015768 197 GSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFS--FSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNI---------- 264 (400)
Q Consensus 197 ~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s--~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~---------- 264 (400)
|+++|+|++|+.+......... ...++...| .+|.++ +| +.|+++.++ +++.+++.......
T Consensus 155 ~~~li~D~a~~~g~~~~~~~~g--~~~~~~~~s~~~~k~~~-~g-~gG~~~~~~--~~l~~~~~~~~~~g~~~~~~~~~~ 228 (390)
T 3b8x_A 155 DIILLEDNCESMGATFNNKCAG--TFGLMGTFSSFYSNHIA-TM-EGGCIVTDD--EEIYHILLCIRAHGWTRNLPKKNK 228 (390)
T ss_dssp CCEEEEECTTCTTCEETTEETT--SSSSEEEEECCTTSSSC-SS-SCEEEEESC--HHHHHHHHHHTBTTBSTTSCSEET
T ss_pred CCEEEEECcCcccCEECCcccc--cccceEEEEccCCCCCc-cC-CceEEEeCC--HHHHHHHHHHHhcCCCcccccccc
Confidence 9999999999854321111111 111233322 355553 33 349998874 46666665433211
Q ss_pred ---------------------CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC--CCc-e
Q 015768 265 ---------------------PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG--EGA-I 320 (400)
Q Consensus 265 ---------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~-~ 320 (400)
++..+.+...++...+ +++++..++.+++++++.+.|++++++.+..+ ... .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~ 304 (390)
T 3b8x_A 229 VTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL----KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWF 304 (390)
T ss_dssp TTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCC
T ss_pred ccccccccccccccceeccccccCcCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccE
Confidence 1114455555544444 44677888888999999999998865454432 222 2
Q ss_pred EEEeeCCCC-CCCHHHHHHHHHHhcCeEEeC---CCccCC-C---------------------CeEEEEecc-CCHHHHH
Q 015768 321 YLWARLPEK-HLDDFEVVRWLAHRHGVVVIP---GGACGC-R---------------------GHLRISFGG-LVEDDCK 373 (400)
Q Consensus 321 ~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~---g~~~~~-~---------------------~~iRi~~~~-~~~~~~~ 373 (400)
.+++.++.. ..+.+++...|. ++||.+.+ |..|.. + +.+||+++. +|++|++
T Consensus 305 ~~~i~~~~~~~~~~~~l~~~L~-~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~ 383 (390)
T 3b8x_A 305 GFSFIIKKDSGVIRKQLVENLN-SAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEID 383 (390)
T ss_dssp EEEEEECTTSCCCHHHHHHHHH-HTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHH
T ss_pred EEEEEecCcCcccHHHHHHHHH-HCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHH
Confidence 355566531 235778888775 78999986 332211 0 259999988 9999999
Q ss_pred HHHHHH
Q 015768 374 AAADRL 379 (400)
Q Consensus 374 ~~~~~l 379 (400)
.+++.|
T Consensus 384 ~i~~~l 389 (390)
T 3b8x_A 384 YLREVL 389 (390)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 988876
No 215
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.95 E-value=4.7e-26 Score=222.04 Aligned_cols=331 Identities=13% Similarity=0.102 Sum_probs=230.5
Q ss_pred CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCC-
Q 015768 44 PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLC-------D-AGD- 114 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~-------~-~gd- 114 (400)
.|+.++..+.....++....|...++..++++++.+++++.+|.+++++++|+|+|+|+..++.++. + +|+
T Consensus 120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~ 199 (515)
T 2jis_A 120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLR 199 (515)
T ss_dssp CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGG
T ss_pred CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCcc
Confidence 3455554444433344344565566677888999999999999888899999999999999988874 2 576
Q ss_pred -----EEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhcc----CCCCeEEEEeCCCCCCccCCC
Q 015768 115 -----SVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLET----KPTPKLVSVVNPGNPSGTYIP 182 (400)
Q Consensus 115 -----~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~----~~~~~~v~l~~p~nptG~~~~ 182 (400)
+|+++.++|+++...++..|. +++.+ |.+++ +.+|+++|++.+++ +..+++|++++++|++|.+.|
T Consensus 200 ~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v-~~~~~-~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~ 277 (515)
T 2jis_A 200 TLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVV-KADER-GKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP 277 (515)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEE-CBCTT-SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC
T ss_pred ccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEE-ecCCC-CcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC
Confidence 899999999999999998887 88888 88754 57899999999974 222589999999999999999
Q ss_pred HHHHHHHHHHHHHcCCEEEEcccccccccCCCCcc--ccC-CCcEEEEeccccccCCCcceeEEEEccCCcH-HHHHHH-
Q 015768 183 ERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHC--CVE-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVE-GFATQL- 257 (400)
Q Consensus 183 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~--~~~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~-~~~~~l- 257 (400)
+++|.++|++||+++|+|++|+.+......+. ... .+.++++.|+||+++ .+.++|+++.++ + ++.++.
T Consensus 278 ---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~--~~~~~~~~~ 351 (515)
T 2jis_A 278 ---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLA-AGLQCSALLLQD--TSNLLKRCH 351 (515)
T ss_dssp ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTC-CCSCCEEEEESC--CSCHHHHHH
T ss_pred ---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccC-CCCCeeEEEEeC--hHHHHHHHh
Confidence 89999999999999999999998776433221 111 245688999999987 346789999885 3 244431
Q ss_pred ---HHhh-c----------cCCc------CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-C
Q 015768 258 ---LKVQ-D----------NIPI------CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G 316 (400)
Q Consensus 258 ---~~~~-~----------~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~ 316 (400)
..+. . ..+. ....+.++++..++. .+.++++.++..++++++.+.|++++++++.. +
T Consensus 352 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg--~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~ 429 (515)
T 2jis_A 352 GSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG--DQGLERRIDQAFVLARYLVEEMKKREGFELVMEP 429 (515)
T ss_dssp CC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCC
T ss_pred cCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Confidence 1111 0 0000 112455555555554 35577888899999999999999986656654 3
Q ss_pred CCceEEEeeCCCC------CCCH--------HHHHHHHHHhcCeEEeCCCc-cCCCCeEEEEe-cc-CCHHHHHHHHHHH
Q 015768 317 EGAIYLWARLPEK------HLDD--------FEVVRWLAHRHGVVVIPGGA-CGCRGHLRISF-GG-LVEDDCKAAADRL 379 (400)
Q Consensus 317 ~~~~~~~~~~~~~------~~~~--------~~~~~~l~~~~gi~v~~g~~-~~~~~~iRi~~-~~-~~~~~~~~~~~~l 379 (400)
..+.+.+...+.. ..+. ..+...+. +.|+.+..... .+..+++|+++ +. ++++|++.+++.|
T Consensus 430 ~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l 508 (515)
T 2jis_A 430 EFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMV-KEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNEL 508 (515)
T ss_dssp SSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred CeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHH-hcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 3344443333321 0111 12455555 66765432111 12346899999 45 7999999999999
Q ss_pred HHHHHH
Q 015768 380 RRGLEE 385 (400)
Q Consensus 380 ~~~l~~ 385 (400)
++++++
T Consensus 509 ~~~~~~ 514 (515)
T 2jis_A 509 ERLGQD 514 (515)
T ss_dssp HHHHTT
T ss_pred HHHHhh
Confidence 887654
No 216
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.91 E-value=9.4e-30 Score=242.33 Aligned_cols=331 Identities=13% Similarity=0.066 Sum_probs=228.6
Q ss_pred hcCCCeEEcCCCCC--CCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGVV--YWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.+|||..+.. .++ .+|+|++++.+.+.+.....| +.....++.+.+++ ..+ ..+.+++++|+++|+.
T Consensus 97 ~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~----~~p-~~~~v~~~nSGseA~~ 170 (465)
T 2yky_A 97 VDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLST-QTENEALFAEAVCD----RFP-SIDLVRFTNSGTEANL 170 (465)
Confidence 56789999988874 344 589999999998877433333 23333444444444 443 3578999999999999
Q ss_pred HHHHHhc--CCCCEEEEeCCCccchhHHHH----hcCc--EEEEeccCCCCCCCCCHHHHHHhhccC-CCCeEEEEeCCC
Q 015768 104 NIVLTLC--DAGDSVVMFAPYYFNSYMSFQ----MTGV--THILVGPCSSKTLHPDADWLEKTLETK-PTPKLVSVVNPG 174 (400)
Q Consensus 104 ~~~~~l~--~~gd~vlv~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~~~e~l~~~l~~~-~~~~~v~l~~p~ 174 (400)
.+++.+. ..+++|++.+++|++...... ..|+ .++.+ |. .|++.+++.++.. ..+++|+++..+
T Consensus 171 ~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~-~~------~d~~~l~~~l~~~~~~~aavi~epv~ 243 (465)
T 2yky_A 171 MALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLG-VY------NDVEGTADLLKRHGHDCAAILVEPML 243 (465)
Confidence 9998864 345899999999988665433 1233 22333 21 2788899888731 235788777556
Q ss_pred CCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHH
Q 015768 175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGF 253 (400)
Q Consensus 175 nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~ 253 (400)
+++|.+ .+.+++++|.++|++||+++|+||+|. +..+ ........+....+.|+||++| +|+|+||++++ +++
T Consensus 244 ~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~~~a~~~~gv~pDi~t~sK~lg-~G~piG~v~~~---~~i 317 (465)
T 2yky_A 244 GAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-GGGAQEMLGISADLTTLGKYIG-GGMSFGAFGGR---RDL 317 (465)
Confidence 669964 568899999999999999999999999 6432 2111111222334568999998 59999999999 678
Q ss_pred HHHHHH-----hhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccC----CCCcccCCCCceEEEe
Q 015768 254 ATQLLK-----VQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPL----GEGAVKGGEGAIYLWA 324 (400)
Q Consensus 254 ~~~l~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~ 324 (400)
++.+.. .....+++.|++++.++.++|+...+ +...+++.++.+++++.|+++ +....... .|.++++
T Consensus 318 ~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g-~G~~~~i 394 (465)
T 2yky_A 318 MERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT--RQAASDLSASGDRFRANLNRIAVENQAPLQFTG-LGSLGTI 394 (465)
Confidence 877765 23446788899999999888875322 345666777777777777664 22122333 3777887
Q ss_pred eCCC-CC-----------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 325 RLPE-KH-----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 325 ~~~~-~~-----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.++. .. ....+++..++ ++||++.|+.. . . +++. .+++++++++++|.++++++.
T Consensus 395 ~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~~-~--~---~s~~-~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 395 HFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRGM-Y--A---LSLE-IADAGRDAFAEALADFIGEQR 461 (465)
Confidence 7753 10 01346777776 79999998762 1 1 5655 589999999999999998763
No 217
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.94 E-value=8.8e-26 Score=215.91 Aligned_cols=320 Identities=17% Similarity=0.133 Sum_probs=211.0
Q ss_pred EcCCCCCCCCCcHHHHHHHH---HhhcCCCCCCCC--CCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHH
Q 015768 34 SLAQGVVYWQPPKMAMEKVK---ELVWDPSISKYG--ADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLT 108 (400)
Q Consensus 34 ~~~~~~~~~~~~~~v~~a~~---~~~~~~~~~~y~--~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~ 108 (400)
.++.|.++...|+.+ +++. ..... ...|. ...|..++.+++.+++++.+|++++++++++|+|.+.+.++.+
T Consensus 68 ~~~~g~~~~~~p~~v-~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a 144 (438)
T 1wyu_A 68 FLGGGVRSHHVPPVV-QALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLA 144 (438)
T ss_dssp CCCSSCCCCCCCHHH-HHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHH
T ss_pred ccCCCccCCcCcHHH-HHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHH
Confidence 445555555556555 4443 22222 22332 1345567777888888888898888889999999555554444
Q ss_pred h-cCCCCEEEEeCCCccchhHHHH----hcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCH
Q 015768 109 L-CDAGDSVVMFAPYYFNSYMSFQ----MTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPE 183 (400)
Q Consensus 109 l-~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~ 183 (400)
+ .++||+|+++.++|+++...++ ..|++++.+ +. ++ +.+|+++ +++++ ++|++++| ||+|.+.+
T Consensus 145 ~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v-~~-~~-~~~d~~~----i~~~t--~~v~i~~p-n~tG~~~~- 213 (438)
T 1wyu_A 145 LRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL-PL-EG-GRTPLPE----VGEEV--GAVVVQNP-NFLGALED- 213 (438)
T ss_dssp HHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE-CC-BT-TBCCCCC----CCTTE--EEEEEESS-CTTSBCCC-
T ss_pred HhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEE-cC-cC-CccCHHH----hCCCe--EEEEEECC-CCCeEEec-
Confidence 3 4789999999999998886654 489999999 76 33 3567665 55544 99999999 99999998
Q ss_pred HHHHHHHHHHHHcCCEEEEccc-ccccccCCCCccccCCCcEEEEeccccccC----CCcceeEEEEccCCcHHHHHHHH
Q 015768 184 RLLKRISDLCKAAGSWLVVDNT-YEYFMYDGRKHCCVEGDHVVNLFSFSKAYG----MMGWRVGYIAYPSEVEGFATQLL 258 (400)
Q Consensus 184 ~~l~~i~~l~~~~~~~li~D~a-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g----~~g~~~G~i~~~~~~~~~~~~l~ 258 (400)
+++|.++|+++|+++|+|.. .+.... ..+ ...+.+++++| +|.|| +.|.++||++.+ +++.+.+.
T Consensus 214 --l~~i~~la~~~g~~vivd~d~~a~g~~-~~~---~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~---~~~~~~l~ 283 (438)
T 1wyu_A 214 --LGPFAEAAHGAGALFVAVADPLSLGVL-KPP---GAYGADIAVGD-GQSLGLPMGFGGPHFGFLATK---KAFVRQLP 283 (438)
T ss_dssp --HHHHHHHHHHTTCEEEEECCTTGGGTB-CCH---HHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEEC---GGGGGGCC
T ss_pred --HHHHHHHHHHcCCEEEEEechhhccCc-CCC---ccCCCCEEEEC-CcccCCCccCCCCCeeEEEEc---HHHHHhCC
Confidence 99999999999999996633 221111 111 12244577777 55443 345689999988 45544431
Q ss_pred Hh-------------------------h-ccCCcCc---cHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHHHHHhccC
Q 015768 259 KV-------------------------Q-DNIPICA---SIISQHLALYSLQT-GPEWVTERVKDLVRNREIIREALSPL 308 (400)
Q Consensus 259 ~~-------------------------~-~~~~~~~---~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (400)
.. + ...+.+. +.....++..++.. +.+.++++.+++.++++++.+.|+++
T Consensus 284 ~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 363 (438)
T 1wyu_A 284 GRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEV 363 (438)
T ss_dssp SCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 10 0 0112221 22222222222321 23446778888999999999999998
Q ss_pred CCCcccCCCCceE--EEeeCCCCCCCHHHHHHHHHHhcCeEE--eCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHH
Q 015768 309 GEGAVKGGEGAIY--LWARLPEKHLDDFEVVRWLAHRHGVVV--IPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGL 383 (400)
Q Consensus 309 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~gi~v--~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l 383 (400)
+++++..+. ..+ +.++++ .+..++..+|. ++||.+ .++..|. ++++|++++. ++++|+++++++|++++
T Consensus 364 ~g~~~~~~~-~~~~~~~~~~~---~~~~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 364 PGVRPFTPK-PFFNEFALALP---KDPEAVRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp TTCEECSCS-SBCSEEEEECS---SCHHHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred CCeEECCCC-CeEEEEEEeCC---CCHHHHHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 665666553 222 334443 25788998887 679999 6666553 7899999986 79999999999998764
No 218
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.94 E-value=1.6e-26 Score=221.03 Aligned_cols=287 Identities=9% Similarity=0.039 Sum_probs=195.1
Q ss_pred HHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccC--CCC-C--
Q 015768 73 LRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPC--SSK-T-- 147 (400)
Q Consensus 73 ~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~--~~~-~-- 147 (400)
..+++.+++++ +|.+ +++++++|+|+++..++.++.++||+|+++.++|.++...+...|++++++ +. +++ +
T Consensus 58 ~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v-~~~~~~~~~~~ 134 (446)
T 2x3l_A 58 VILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFI-ETHQSPLTNHY 134 (446)
T ss_dssp HHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEEC-EEEECTTTSSE
T ss_pred HHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEE-eCeeccccCcC
Confidence 34556666666 6766 789999999999999999999999999999999999999999999999888 66 432 1
Q ss_pred CCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccc-cccCCCCccccCCCcEEE
Q 015768 148 LHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEY-FMYDGRKHCCVEGDHVVN 226 (400)
Q Consensus 148 ~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~~i~ 226 (400)
+.+|++.+ +.++ +++|++++ .|++|.+.+ +++|.++|++||+++|+|++|+. +.+.+.+......+.+++
T Consensus 135 ~~~d~~~l---~~~~--~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~ 205 (446)
T 2x3l_A 135 NKVNLSRL---NNDG--HKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYV 205 (446)
T ss_dssp EEEEC------------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEE
T ss_pred CCCCHHHH---cCCC--ceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEE
Confidence 34677776 3344 49999998 566999999 88999999999999999999986 323332222222345699
Q ss_pred EeccccccCCCcceeEEEEccCCcHHHHHHHHHhh-ccCCcCccHHHHHHHHHHhcCCcHH-HHHHHHHHHHHHHHHHHH
Q 015768 227 LFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQ-DNIPICASIISQHLALYSLQTGPEW-VTERVKDLVRNREIIREA 304 (400)
Q Consensus 227 ~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~ 304 (400)
+.|+||+++ ++.++||++.+++.-+ ...+.... ...+.+++.....++..+++....+ ..+..++..++++.+++.
T Consensus 206 ~~S~~K~l~-~~~g~g~l~~~~~~i~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 206 VQSFHKTLP-ALTMGSVLYIHKNAPY-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp EECHHHHSS-SCTTCEEEEEETTCTT-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred EECCccccc-cccccEEEEEcCCcCC-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc
Confidence 999999764 4456899988753212 22333211 1123344544444433333210110 122455556666666665
Q ss_pred hccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe-CCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHH
Q 015768 305 LSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI-PGGACGCRGHLRISFGG-LVEDDCKAAADRLRRG 382 (400)
Q Consensus 305 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~-~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~ 382 (400)
++.+..+....++|+.++ ..+..++..+|. ++||.+. +| .+++|++++. ++++++ .++++|+++
T Consensus 284 -----g~~~~~~~~~~~l~i~~~--~~~~~~l~~~L~-~~GI~v~~~g-----~~~iRi~~~~~~t~e~i-~l~~aL~~~ 349 (446)
T 2x3l_A 284 -----GFEMLQVDDPLKLLIKYE--GFTGHDIQNWFM-NAHIYLELAD-----DYQALAILPLWHHDDTY-LFDSLLRKI 349 (446)
T ss_dssp -----TCEEEECSSTTEEEEECT--TSCHHHHHHHHH-HTTEEESEEC-----SSCEEEECCCCCTTCCC-CHHHHHHHH
T ss_pred -----CCEECcCCCCeEEEEEeC--CcCHHHHHHHHH-HCCCEEEecC-----CCEEEEEeecCCCHHHH-HHHHHHHHH
Confidence 334544443557888887 246788888886 5699997 43 4789999987 688999 999999998
Q ss_pred HHHHh
Q 015768 383 LEELV 387 (400)
Q Consensus 383 l~~~~ 387 (400)
++.+.
T Consensus 350 ~~~~~ 354 (446)
T 2x3l_A 350 EDMIL 354 (446)
T ss_dssp HTCCC
T ss_pred HHhhc
Confidence 87653
No 219
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=2.5e-25 Score=211.43 Aligned_cols=284 Identities=17% Similarity=0.113 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH----HhcCcEEEEeccCCCC
Q 015768 71 PELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF----QMTGVTHILVGPCSSK 146 (400)
Q Consensus 71 ~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~ 146 (400)
.++++.+++++ |.+ ..++++++++|++.++.++.++||+|+++.++|++....+ +..|++++.+ + +.+
T Consensus 61 ~~l~~~la~~~----g~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~~~ 132 (421)
T 2ctz_A 61 DVLEKRLAALE----GGK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFT-S-REE 132 (421)
T ss_dssp HHHHHHHHHHH----TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEEC-C-TTC
T ss_pred HHHHHHHHHHh----CCC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE-C-CCC
Confidence 55666666655 543 4456666799999999999999999999999999887765 7789988766 3 221
Q ss_pred CCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccc-cccccCCCCccccCCCcEE
Q 015768 147 TLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTY-EYFMYDGRKHCCVEGDHVV 225 (400)
Q Consensus 147 ~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~-~~~~~~~~~~~~~~~~~~i 225 (400)
|++++++.+++++ ++|++++++||+|.+.| +++|.++|++||+++|+|++| +.. +.+.+. ..+.++
T Consensus 133 ----d~~~l~~~i~~~~--~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~~~---~~~~Di 199 (421)
T 2ctz_A 133 ----RPEEFLALTDEKT--RAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLRPL---AWGAAL 199 (421)
T ss_dssp ----CHHHHHHHCCTTE--EEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCCGG---GGTCSE
T ss_pred ----CHHHHHHhhccCC--eEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCCcc---ccCCeE
Confidence 7899999998755 99999999999999999 999999999999999999999 533 222221 234679
Q ss_pred EEeccccccCCCcceeEEEEccCCcHHH----HHHHHHh--------------------------hccCCcCccHHHHHH
Q 015768 226 NLFSFSKAYGMMGWRVGYIAYPSEVEGF----ATQLLKV--------------------------QDNIPICASIISQHL 275 (400)
Q Consensus 226 ~~~s~sK~~g~~g~~~G~i~~~~~~~~~----~~~l~~~--------------------------~~~~~~~~~~~~~~~ 275 (400)
++.|+||+++.+|.++|+++..++.+++ .+.+... ........++...++
T Consensus 200 ~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~ 279 (421)
T 2ctz_A 200 VTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWV 279 (421)
T ss_dssp EEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHH
T ss_pred EEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 9999999998788888887664210111 1112110 011122445555555
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccC-C-----------------CCceEEEeeCCCCCCCHHHHH
Q 015768 276 ALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKG-G-----------------EGAIYLWARLPEKHLDDFEVV 337 (400)
Q Consensus 276 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~ 337 (400)
+...++. +..+.+++.++.+++.+.|++++.+..+. | ..+.++.+.+.....+...+.
T Consensus 280 ~~~~l~~----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~ 355 (421)
T 2ctz_A 280 VLLGMET----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFI 355 (421)
T ss_dssp HHHHHTT----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHH
T ss_pred HHcCcch----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHH
Confidence 5555554 45566677788999999999887644321 1 124566667753110122233
Q ss_pred HHHHHhcCeEEeCCCccC-----------------------CCCeEEEEeccCCHHHHHHHHHHHHHHH
Q 015768 338 RWLAHRHGVVVIPGGACG-----------------------CRGHLRISFGGLVEDDCKAAADRLRRGL 383 (400)
Q Consensus 338 ~~l~~~~gi~v~~g~~~~-----------------------~~~~iRi~~~~~~~~~~~~~~~~l~~~l 383 (400)
..+ +..++.+..|..+. .++.+|+|++. ++++++++.|++++
T Consensus 356 ~~l-~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~---e~~~~li~~l~~al 420 (421)
T 2ctz_A 356 SRL-KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL---EHVEDLKAELKEAL 420 (421)
T ss_dssp HTC-SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS---SCHHHHHHHHHHHT
T ss_pred HhC-CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC---CCHHHHHHHHHHHh
Confidence 322 12344555552211 14789999986 67788888888875
No 220
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.93 E-value=3.9e-25 Score=208.49 Aligned_cols=272 Identities=16% Similarity=0.082 Sum_probs=187.2
Q ss_pred HHHHHHHHHhhcCC----CCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEE
Q 015768 46 KMAMEKVKELVWDP----SISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSVV 117 (400)
Q Consensus 46 ~~v~~a~~~~~~~~----~~~~y~~-~~g~~~~~~~~a~~l~~~~~~~~~~i~~---~~g~t~a~~~~~~~l~~~gd~vl 117 (400)
++|++++.+..... ...+|+. ..+.+.+++.+++++ |.+ ..++ ++|+++|+..++.++++|||+|+
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~----g~e--~alv~p~~~sGt~A~~~al~all~pGD~Vl 120 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIF----NTE--SAFVRPHFVNGTHAIGAALFGNLRPNDTMM 120 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHH----TCS--EEEEETTCCSHHHHHHHHHHHTCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHh----CCC--ceEEeCCCCcHHHHHHHHHHHhcCCCCEEE
Confidence 78888888764321 1222322 224445555555544 643 3455 78899999999999999999999
Q ss_pred EeC-CCccchh-----------HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC----CCCCCccCC
Q 015768 118 MFA-PYYFNSY-----------MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTYI 181 (400)
Q Consensus 118 v~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~----p~nptG~~~ 181 (400)
+.+ |.|.++. ..++..|++++.+ +. + ++.+|++++++.++....+|+|++++ |+||+|.+.
T Consensus 121 ~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v-~~-~-~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~ 197 (427)
T 3hvy_A 121 SICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMV-DL-K-DGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIA 197 (427)
T ss_dssp ECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEEC-CC-B-TTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHH
T ss_pred EeCCCCchhHHHHhccccchhhhHHHHcCCEEEEe-cC-C-CCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHH
Confidence 998 9998876 3456679999988 77 3 34689999999998312249999998 999998776
Q ss_pred CHHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHH
Q 015768 182 PERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLL 258 (400)
Q Consensus 182 ~~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~ 258 (400)
+ +++|+++|++ ||+++++|++|+.+.+...+ ...+.+++++|+||++|.+| .+.||++++ +++++++.
T Consensus 198 d---l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~---~~li~~l~ 268 (427)
T 3hvy_A 198 E---IAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---TDVGADIIAGSLIKNIGGGIATTGGYIAGK---EEYVTQAT 268 (427)
T ss_dssp H---HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---GGGTCSEEEEETTSGGGTTTCCSCEEEEEC---HHHHHHHH
T ss_pred H---HHHHHHHHHHhCCCCEEEEECCccccccCCCC---cccCCeEEEECCcccccccccceEEEEEEC---HHHHHHHH
Confidence 6 9999999999 89999999999876643222 23356799999999997433 567999998 88999887
Q ss_pred HhhccCCc----CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCCC
Q 015768 259 KVQDNIPI----CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKH 330 (400)
Q Consensus 259 ~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~ 330 (400)
........ +++......+...+. ....+.++..+++.++++.|++++. .+.+.. ....+.+.+...
T Consensus 269 ~~~~~~~~g~~~~~~~~~a~~~~~gl~----~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~li~~~~l~~~- 342 (427)
T 3hvy_A 269 FRVTVPGIGGECGSTFGVMRSLYEGLF----MAPHVTIEAVKGAVFCARIMELAGF-DVLPKYNDKRTDIIQAIKFNDE- 342 (427)
T ss_dssp HHHSCTTTGGGCCCCTTCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSEEEEECSSH-
T ss_pred HHhhcCCcccccCCCHHHHHHHHHhHh----HHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCceEEEEEeCCCH-
Confidence 74322121 121111333333333 3567888899999999999999887 543322 122666677521
Q ss_pred CCHHHHHHHHH
Q 015768 331 LDDFEVVRWLA 341 (400)
Q Consensus 331 ~~~~~~~~~l~ 341 (400)
....++++.|.
T Consensus 343 ~~~~~f~~~l~ 353 (427)
T 3hvy_A 343 KKLIDFIKGIQ 353 (427)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 12445666554
No 221
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.9e-24 Score=200.14 Aligned_cols=324 Identities=13% Similarity=0.072 Sum_probs=220.9
Q ss_pred CCCCCcHHHHHHHHHhhcCCCC---CCC---CCCCCcHHHHHHHHHHHHhhcCCCC-CcEEE-eCChHHHHHHHHHHhcC
Q 015768 40 VYWQPPKMAMEKVKELVWDPSI---SKY---GADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFVNIVLTLCD 111 (400)
Q Consensus 40 ~~~~~~~~v~~a~~~~~~~~~~---~~y---~~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~-~~g~t~a~~~~~~~l~~ 111 (400)
...+.|++|++++.+.+.+... ..+ .......++.+...+.+++.+|+++ ++|+| ++|+|++++.++..+..
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~ 99 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIG 99 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGG
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccC
Confidence 3456899999999998864211 111 1112234455566666666678864 67888 48999999999999986
Q ss_pred C--CCEEEEeCCCccch--hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHH
Q 015768 112 A--GDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLK 187 (400)
Q Consensus 112 ~--gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 187 (400)
+ ||+|++..-++++. ...++..|..++.+ +.+.+ ...+++.++..+++++ ++|.+++.+|.||.+.| +
T Consensus 100 ~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~-~~~~~-~~~~~~~~~~~i~~~t--~lV~~~h~et~tG~~~p---i- 171 (377)
T 3e77_A 100 LKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH-PKLGS-YTKIPDPSTWNLNPDA--SYVYYCANETVHGVEFD---F- 171 (377)
T ss_dssp GSTTCEEEECCCSHHHHHHHHHHTTTSEEEECS-CCCSS-SCSCCCGGGCCCCTTC--SCEEEESEETTTTEECS---S-
T ss_pred CCCCCeEEEEECCHHHHHHHHHHHHhCCceEEe-ccCCC-cCCCCChHHhccCCCc--cEEEEeCccCchheEch---h-
Confidence 5 89998877766553 34566778887777 66533 3456667766666665 89999988899999999 4
Q ss_pred HHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc--------HHHHH-HHH
Q 015768 188 RISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFAT-QLL 258 (400)
Q Consensus 188 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~--------~~~~~-~l~ 258 (400)
+|+++|+++++|.+++.+ ..+......+ +++.|.+|++|.+| +|+++.+++. +.+.+ ...
T Consensus 172 ----i~~~~~~~~~vD~~q~~g---~~~id~~~~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~ 240 (377)
T 3e77_A 172 ----IPDVKGAVLVCDMSSNFL---SKPVDVSKFG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVLEYKVQ 240 (377)
T ss_dssp ----CCCCTTCCEEEECTTTTT---SSCCCGGGCS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGGCHHHH
T ss_pred ----hhccCCCEEEEEcccccC---CCCCchhhcC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchhhHHHH
Confidence 366889999999999843 3344333344 57789999998667 5777666421 11111 001
Q ss_pred HhhccCCcCccHHHHHHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHHhccCCCCcccC----CCCceEEEeeCCCCCCC
Q 015768 259 KVQDNIPICASIISQHLALYSLQTGP-E-WVTERVKDLVRNREIIREALSPLGEGAVKG----GEGAIYLWARLPEKHLD 332 (400)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 332 (400)
........+++....+++..+++.-. . .++++.++.+++.+++++.|++++++.+.. ..++..+.+.++....+
T Consensus 241 ~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~ 320 (377)
T 3e77_A 241 AGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGD 320 (377)
T ss_dssp HTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCC
T ss_pred hhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCc
Confidence 11122345778888888777776422 2 467888899999999999999986544322 12344566777642111
Q ss_pred H---HHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 333 D---FEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 333 ~---~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
. ..+...+. ++||.+.+|.. ..+.+|+|+.. +|++|++.+++.|++++++
T Consensus 321 ~~~~~~~l~~l~-~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 321 DALEKRFLDKAL-ELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp HHHHHHHHHHHH-HTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH-HCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 34556554 78999988753 35679999988 8999999999999998865
No 222
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.93 E-value=2.4e-24 Score=202.42 Aligned_cols=271 Identities=16% Similarity=0.110 Sum_probs=190.1
Q ss_pred HHHHHHHHHhhcC----CCCCCCCC-CCCcHHHHHHHHHHHHhhcCCCCCcEEE---eCChHHHHHHHHHHhcCCCCEEE
Q 015768 46 KMAMEKVKELVWD----PSISKYGA-DEGLPELRDALVKKLNQENKLYKSSVMV---TAGANQAFVNIVLTLCDAGDSVV 117 (400)
Q Consensus 46 ~~v~~a~~~~~~~----~~~~~y~~-~~g~~~~~~~~a~~l~~~~~~~~~~i~~---~~g~t~a~~~~~~~l~~~gd~vl 117 (400)
.+|++++.+.... +....|.. ..+...+++.+++++ |. +..++ ++|+++|+..++.++++|||+|+
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~----g~--e~alv~p~~~sGt~Ai~~al~all~~GD~Vl 105 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVF----KT--EAALVRPQIISGTHAISTVLFGILRPDDELL 105 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHH----TC--SEEEEETTSCSHHHHHHHHHHHHCCTTCEEE
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHh----CC--CcEEEECCCccHHHHHHHHHHHhcCCCCEEE
Confidence 6788888876422 11222222 233455555555554 64 33444 88999999999999999999999
Q ss_pred EeC-CCccchhH----------HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC----CCCCCccCCC
Q 015768 118 MFA-PYYFNSYM----------SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTYIP 182 (400)
Q Consensus 118 v~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~----p~nptG~~~~ 182 (400)
++. +.|.++.. .++..|++++.+ +.+++ +.+|++++++.+++++ ++|++++ |+||+|.+.+
T Consensus 106 ~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v-~~~~~-g~~d~e~l~~ai~~~t--klV~i~~s~g~p~nptg~v~~ 181 (409)
T 3jzl_A 106 YITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV-PLLEN-GDVDFPRIAKKMTPKT--KMIGIQRSRGYADRPSFTIEK 181 (409)
T ss_dssp ECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC-CCCTT-SCCCHHHHHHHCCTTE--EEEEEECSCTTSSSCCCCHHH
T ss_pred EeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe-CCCCC-CCcCHHHHHHhccCCC--eEEEEECCCCCCCCCcCcccc
Confidence 998 99988874 346679999999 88765 4689999999998765 9999999 9999998876
Q ss_pred HHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHH
Q 015768 183 ERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 183 ~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+++|.++|++ ||+++++|++|+.+.+...+ ...+.+++++|+||++|.+| ...||++++ +++++++..
T Consensus 182 ---l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~~~g~Div~~S~sK~lgg~~~~~GG~v~~~---~~li~~l~~ 252 (409)
T 3jzl_A 182 ---IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---PEVGADIIAGSLIKNPGGGLAKTGGYIAGK---EALVDLCGY 252 (409)
T ss_dssp ---HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---GGGTCSEEEEETTSGGGTTTCSSCEEEEEC---HHHHHHHHH
T ss_pred ---HHHHHHHHHhhCCCCEEEEeCCcccccccCCc---cccCCeEEEECccccCCccCCceEEEEEeC---HHHHHHHHH
Confidence 9999999999 99999999999876543222 23356799999999997444 446999998 889888876
Q ss_pred hhccC----CcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCCCC
Q 015768 260 VQDNI----PICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKHL 331 (400)
Q Consensus 260 ~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~~ 331 (400)
..... ..++......++...+. ....+++++.+++.++++.|++++. .+.+.. ....+.+.+... .
T Consensus 253 ~~~~~~~g~~~g~~~~~~~~~l~gl~----~~~~r~~~~~~~a~~la~~L~~~g~-~v~p~~~~~~~~~i~~i~l~~~-~ 326 (409)
T 3jzl_A 253 RLTTPGIGREAGASLYSLLEMYQGFF----LAPHVTAQAIKGARFTAAMLAEFGV-EADPVWDAPRTDLIQSVSFHNK-E 326 (409)
T ss_dssp HHSCTTTGGGCCCCTTCHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCCEEECSCH-H
T ss_pred HhccccccccccccHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHhCCC-cccCCCCCCCccEEEEEEeCCH-H
Confidence 43221 12222211233333443 3567788899999999999999887 443221 122555666532 2
Q ss_pred CHHHHHHHHH
Q 015768 332 DDFEVVRWLA 341 (400)
Q Consensus 332 ~~~~~~~~l~ 341 (400)
...++++.|.
T Consensus 327 ~~~~~~~~L~ 336 (409)
T 3jzl_A 327 KMVAFAQAIQ 336 (409)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3456777664
No 223
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.93 E-value=2.4e-24 Score=203.09 Aligned_cols=274 Identities=15% Similarity=0.079 Sum_probs=189.1
Q ss_pred HHHHHHHHHhhcC----CCCCCCC-CCCCcHHHHHHHHHHHHhhcCCCCCcEEE--eCChHHHHHHHHHHhcCCCCEEEE
Q 015768 46 KMAMEKVKELVWD----PSISKYG-ADEGLPELRDALVKKLNQENKLYKSSVMV--TAGANQAFVNIVLTLCDAGDSVVM 118 (400)
Q Consensus 46 ~~v~~a~~~~~~~----~~~~~y~-~~~g~~~~~~~~a~~l~~~~~~~~~~i~~--~~g~t~a~~~~~~~l~~~gd~vlv 118 (400)
++|++++.+.... +....|+ +..+...+++.++++ +|.+. .+++ ++|+++|+..++.++++|||+|++
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~~~~~~Le~~lA~l----~g~e~-alv~p~~~sGt~Ai~~al~all~pGD~Vl~ 120 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGDIGRDSLDAVYARV----FNTES-ALVRPHFVNGTHALGAALFGNLRPGNTMLS 120 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHH----HTCSE-EEEETTCCSHHHHHHHHHHHHCCTTCEEEE
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCHHHHHHHHHHHHHH----hCCcc-eEEeCCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 6788888765321 1122232 223344455555554 46543 2443 888999999999999999999999
Q ss_pred eC-CCccchhH-----------HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeC----CCCCCccCCC
Q 015768 119 FA-PYYFNSYM-----------SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVN----PGNPSGTYIP 182 (400)
Q Consensus 119 ~~-p~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~----p~nptG~~~~ 182 (400)
+. |.|.++.. .++..|++++.+ +.++++ .+|++++++.++....+|+|++++ |+||+|.+.+
T Consensus 121 ~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v-~~~~~g-~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~d 198 (427)
T 3i16_A 121 VCGEPYDTLHDVIGITENSNMGSLKEFGINYKQV-DLKEDG-KPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIED 198 (427)
T ss_dssp SSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEEC-CCCTTS-SCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHH
T ss_pred eCCCccHHHHHHHhccccchHHHHHHcCCEEEEe-cCccCC-CcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHH
Confidence 98 99988773 346679999999 887665 679999999998312249999998 9999988766
Q ss_pred HHHHHHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHH
Q 015768 183 ERLLKRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLK 259 (400)
Q Consensus 183 ~~~l~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~ 259 (400)
+++|+++|++ +|+++++|++|+.+.+...+ ...+.+++++|+||.+|.+| .+.||++++ +++++++..
T Consensus 199 ---l~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~---~~li~~l~~ 269 (427)
T 3i16_A 199 ---IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---TDVGADLIAGSLIKNIGGGIAPTGGYLAGT---KDCIEKTSY 269 (427)
T ss_dssp ---HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---GGGTCSEEEEETTSGGGTTTCCSCEEEEEC---HHHHHHHHH
T ss_pred ---HHHHHHHHHHhCCCCEEEEECCCccccccCCc---cccCCeEEEecCcccCCCCCCceEEEEEEC---HHHHHHHHH
Confidence 9999999999 99999999999876643222 22356799999999997444 567999998 889998877
Q ss_pred hhccCCcC--ccH-HH-HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCCC----CceEEEeeCCCCCC
Q 015768 260 VQDNIPIC--ASI-IS-QHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGGE----GAIYLWARLPEKHL 331 (400)
Q Consensus 260 ~~~~~~~~--~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~~~~~~~~~~ 331 (400)
.......+ ..+ +. ...+...+ .....+.+++.+++.++++.|++++. .+.+.. ...++.+.+... .
T Consensus 270 ~~~~~~~g~~~~~~~~~a~~~l~gl----~~~~~r~~~~~~~a~~la~~L~~~g~-~V~p~~~~~~~~~i~~i~l~~~-~ 343 (427)
T 3i16_A 270 RLTVPGIGGECGSTFGVVRSMYQGL----FLAPHISMEALKGAILCSRIMELAGF-EVMPKYDEKRSDIIQSIKFNDK-D 343 (427)
T ss_dssp HHSCTTTGGGCCCCTTCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTC-EEESCTTSCCSSSCEEEECSSH-H
T ss_pred hcccCccCccCCccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCC-eecCCCCCCCccEEEEEEECCH-H
Confidence 43222221 111 22 23333333 33577888999999999999999987 553322 122666666521 1
Q ss_pred CHHHHHHHHH
Q 015768 332 DDFEVVRWLA 341 (400)
Q Consensus 332 ~~~~~~~~l~ 341 (400)
...++++.|.
T Consensus 344 ~~~~f~~~l~ 353 (427)
T 3i16_A 344 KLIEFCKGIQ 353 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 3456666664
No 224
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.93 E-value=5e-23 Score=205.62 Aligned_cols=302 Identities=11% Similarity=0.015 Sum_probs=203.9
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHH-HHhcCcEEEEeccCCCCCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMS-FQMTGVTHILVGPCSSKTL 148 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~ 148 (400)
..++++.+++++ |.+ ..+++++|+++++..++.+++++||+|+++.++|.++... ++..|++++.+ +.+.+.+
T Consensus 175 i~e~e~~lA~~~----gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v-~~~~~~~ 248 (730)
T 1c4k_A 175 AVAAEKHAARVY----NAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYL-QTNRNPY 248 (730)
T ss_dssp HHHHHHHHHHHT----TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEE-CEEECTT
T ss_pred HHHHHHHHHHHH----CCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEE-eCCcccc
Confidence 345555555554 764 4477888888999999999999999999999999999888 88899999888 5543222
Q ss_pred ----CCCHHHH-----HHhhccC------C-CC-eEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc-c
Q 015768 149 ----HPDADWL-----EKTLETK------P-TP-KLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF-M 210 (400)
Q Consensus 149 ----~~~~e~l-----~~~l~~~------~-~~-~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~-~ 210 (400)
.+|++++ ++.++++ + .+ +++++++| |++|.+.+ +++|+++|++||+++++|++|+.. .
T Consensus 249 ~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 249 GFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWVGYEQ 324 (730)
T ss_dssp CCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred CccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcccccccc
Confidence 3688888 8888754 2 23 89999998 58999999 899999999999999999999743 2
Q ss_pred cCCC-----Cccc----cCCCcEEEEeccccccCCCccee-EEEEccCCc----HHH--HHHHHHhh-ccCCcCccHHHH
Q 015768 211 YDGR-----KHCC----VEGDHVVNLFSFSKAYGMMGWRV-GYIAYPSEV----EGF--ATQLLKVQ-DNIPICASIISQ 273 (400)
Q Consensus 211 ~~~~-----~~~~----~~~~~~i~~~s~sK~~g~~g~~~-G~i~~~~~~----~~~--~~~l~~~~-~~~~~~~~~~~~ 273 (400)
+++. .... .+.++++++.|+||+++ |.+. |+++.++.. +.. ..++.... ...+.+++....
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~--g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~i 402 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQA--GFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMY 402 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSS--CCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHH
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCC--CCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHH
Confidence 3221 1111 11234589999999975 5443 566444310 000 12222211 122445565555
Q ss_pred HHHHHHhcCCcH-HHHHHHHHHHHHHHHHHHHhcc-CCCCcccCCC----------------------------------
Q 015768 274 HLALYSLQTGPE-WVTERVKDLVRNREIIREALSP-LGEGAVKGGE---------------------------------- 317 (400)
Q Consensus 274 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~---------------------------------- 317 (400)
.++..++..... ...++.+++.++.+.+++.|++ ++++.+..+.
T Consensus 403 aal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 482 (730)
T 1c4k_A 403 AALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYE 482 (730)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCT
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhcccc
Confidence 555545442111 3456667788888888888877 5554443321
Q ss_pred ---Cc-eE-----EEeeCCC----------CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768 318 ---GA-IY-----LWARLPE----------KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD 377 (400)
Q Consensus 318 ---~~-~~-----~~~~~~~----------~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~ 377 (400)
.+ ++ +.+..+. ...++..+..+|. ++||.+... ....+|++++. +|+++++.+++
T Consensus 483 ~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~-e~GI~v~~~----~~~~ir~~~s~g~t~e~i~~Ll~ 557 (730)
T 1c4k_A 483 GYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLR-DHGIIPEKS----DLNSILFLMTPAETPAKMNNLIT 557 (730)
T ss_dssp TCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHH-HTTCCCSEE----CSSEEEEECCTTCCHHHHHHHHH
T ss_pred ccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHH-HCCcEEEEC----CCCeEEEEeCCCCCHHHHHHHHH
Confidence 11 11 4555531 2346788888886 679988542 35789999887 89999999999
Q ss_pred HHHHHHHHHhc
Q 015768 378 RLRRGLEELVK 388 (400)
Q Consensus 378 ~l~~~l~~~~~ 388 (400)
.|+++.+.+.+
T Consensus 558 aL~~i~~~~~~ 568 (730)
T 1c4k_A 558 QLLQLQRLIEE 568 (730)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHhccc
Confidence 99999887753
No 225
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.92 E-value=7.6e-25 Score=207.58 Aligned_cols=277 Identities=14% Similarity=0.098 Sum_probs=194.2
Q ss_pred cHHHHHHHHHhhcCC----CCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCc--EEEeCChHHHHHHHHHHhcCCCCEEEE
Q 015768 45 PKMAMEKVKELVWDP----SISKYGADEGLPELRDALVKKLNQENKLYKSS--VMVTAGANQAFVNIVLTLCDAGDSVVM 118 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~----~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~--i~~~~g~t~a~~~~~~~l~~~gd~vlv 118 (400)
.++|++++.+..... ...+|..+ +..++++++++++.+|.+... ++++ ++|+|+..++.++++|||+|++
T Consensus 37 ~~~vl~A~~~~~~~~~~~~~~~g~~y~---~~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~ 112 (431)
T 3ht4_A 37 QFRVLESFGKHKISDSHFIPTTGYGYD---DIGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLY 112 (431)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCCS---CHHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHHhchhhhhcCCCCCCCCC---hhhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEE
Confidence 367888887753221 11222211 234777777777777865332 2244 7789999999999999999999
Q ss_pred eC-CCccchhHHH----------HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEe-CCCCCCccCCCHHHH
Q 015768 119 FA-PYYFNSYMSF----------QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVV-NPGNPSGTYIPERLL 186 (400)
Q Consensus 119 ~~-p~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~-~p~nptG~~~~~~~l 186 (400)
.. |.|.++...+ +..|++++.+ +.+++ +.+|++++++.+++++ ++|+++ +|+||+|...+.+++
T Consensus 113 ~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v-~~~~~-~~~d~e~l~~~l~~~t--k~V~i~~sp~np~~~~~~~~~l 188 (431)
T 3ht4_A 113 ITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV-PLTEG-GLVDFEAVAAAIHSNT--KMIGIQRSKGYATRPSFTISQI 188 (431)
T ss_dssp CSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC-CBCTT-SSBCHHHHHHHCCTTE--EEEEEECSCTTSSSCCCCHHHH
T ss_pred eCCCCchhHHHHHhhcccccchHHHcCCEEEEe-CCCCC-CCcCHHHHHhhcCCCC--eEEEEECCCCCCCCCcCCHHHH
Confidence 98 9998887554 4578999999 87765 4789999999998765 999999 589999999999999
Q ss_pred HHHHHHHHH--cCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCC-CcceeEEEEccCCcHHHHHHHHHhhcc
Q 015768 187 KRISDLCKA--AGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGM-MGWRVGYIAYPSEVEGFATQLLKVQDN 263 (400)
Q Consensus 187 ~~i~~l~~~--~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~-~g~~~G~i~~~~~~~~~~~~l~~~~~~ 263 (400)
++|+++|++ +|+++|+|++|+.+.+...+. ..+.+++++|+||++|. .+...||++++ +++++.+......
T Consensus 189 ~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~~GG~v~~~---~~li~~l~~~~~~ 262 (431)
T 3ht4_A 189 KEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVKTGGYIVGK---EQYVEACAYRLTS 262 (431)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCSSCEEEEEC---HHHHHHHHHHHSC
T ss_pred HHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccCCeEEEcCccccCCCCCCCceEEEEec---HHHHHHHHHHhcc
Confidence 999999999 999999999999887543322 23467999999999752 12445999998 7888888764432
Q ss_pred CCc----CccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhccCCCCcccCC----CCceEEEeeCCCCCCCHHH
Q 015768 264 IPI----CASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSPLGEGAVKGG----EGAIYLWARLPEKHLDDFE 335 (400)
Q Consensus 264 ~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 335 (400)
... +++.....++...+. ....+.++..+++.++.+.|++++. .+.+. ..+..+.+.++.. ....+
T Consensus 263 ~~~g~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~a~~l~~~L~~~g~-~v~p~~~~~~~~li~~i~l~~~-~~~~~ 336 (431)
T 3ht4_A 263 PGIGAEAGASLYSLQEMYQGFF----LAPHVAGQALKGAIFTAAFLEKLGM-NTSPAWNAPRTDLIQSVQFDDK-DRMIA 336 (431)
T ss_dssp TTTTTSCSCCCSCSHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTC-CEESCTTSCCSSSCCEEECCCH-HHHHH
T ss_pred CCcccccCccHHHHHHHHhHhh----hHHHHHHHHHHHHHHHHHHHHhCcC-EecCCCCCCCccEEEEEEeCCH-HHHHH
Confidence 111 121111233333333 2467778888999999999998876 43322 2223556666532 13456
Q ss_pred HHHHHH
Q 015768 336 VVRWLA 341 (400)
Q Consensus 336 ~~~~l~ 341 (400)
+++.+.
T Consensus 337 ~~~~l~ 342 (431)
T 3ht4_A 337 FCQAIQ 342 (431)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777665
No 226
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.92 E-value=2.6e-23 Score=196.62 Aligned_cols=330 Identities=13% Similarity=0.103 Sum_probs=216.2
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAGANQAFV 103 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~ 103 (400)
.+|+.+|||..+. +.++ .+|+|++++.+.+.+...... +..... ++++.+.+... ..+.++|++++|+|++
T Consensus 84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~-~~~~~~----~lae~l~~~~p-~~~~v~f~~SGsEA~e 157 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTG-HNLLEG----RLARLICERFP-QIEQLRFTNSGTEANL 157 (454)
T ss_dssp TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCS-EESSHH----HHHHHHHHHST-TCSEEEEESSHHHHHH
T ss_pred CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccC-CcHHHH----HHHHHHHHhCC-CCCEEEEeCchHHHHH
Confidence 5678899998775 4444 789999999999887432211 222233 44444444433 3588999999999999
Q ss_pred HHHHHhcC--CCCEEEEeCCCccchhHHHHh------cCcEEEEeccCCCCCCCCCHHHHHHhhcc-CCCCeEEEEeCCC
Q 015768 104 NIVLTLCD--AGDSVVMFAPYYFNSYMSFQM------TGVTHILVGPCSSKTLHPDADWLEKTLET-KPTPKLVSVVNPG 174 (400)
Q Consensus 104 ~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~e~l~~~l~~-~~~~~~v~l~~p~ 174 (400)
.+++.... ..++|+....+|++.....-. .......+ |. -|++.+++.++. ...+.+|+++..+
T Consensus 158 ~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~-p~------nd~~~l~~~l~~~~~~iAavIvEPv~ 230 (454)
T 4ao9_A 158 MALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVL-PY------NDAQTARAQIERHGPEIAVVLVEPMQ 230 (454)
T ss_dssp HHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEE-CT------TCHHHHHHHHHHTGGGEEEEEECSEE
T ss_pred HHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccC-CC------chHHHHHHHHhhcCCceEEEEecccc
Confidence 99998752 347899999999885532211 11233333 32 178899988873 2335777777656
Q ss_pred CCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCC---CccccCCCcEEEEeccccccCCCcceeEEEEccCCc
Q 015768 175 NPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR---KHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV 250 (400)
Q Consensus 175 nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~ 250 (400)
...|.+ .+++++++|.++|++||+++|+||++.+ ..+.. ......+| + .+++|.+| .|+++|.++++
T Consensus 231 g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R~G~~~a~e~~gv~PD--i--~t~gK~lg-gG~Piga~~~~--- 301 (454)
T 4ao9_A 231 GASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-RLAPHGLANKLGIRSD--L--TTLGKYIG-GGMSFGAFGGR--- 301 (454)
T ss_dssp STTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-GGSTTCHHHHHTCCCS--E--EEEEGGGG-TTSSCEEEEEC---
T ss_pred CCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-CCccccchhccCCCCc--E--EEeccccC-CCCcceeeeeH---
Confidence 667764 6788999999999999999999999973 22211 01112223 3 36689997 78999999999
Q ss_pred HHHHHHHHHh----hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCcccCCCCceEE
Q 015768 251 EGFATQLLKV----QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGEGAVKGGEGAIYL 322 (400)
Q Consensus 251 ~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~ 322 (400)
+++++.+... ....+++.|+++..++.+.|+...+ ++..+++.++.++|++.|++ .+.+..+... |.++
T Consensus 302 ~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~--~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~m~ 378 (454)
T 4ao9_A 302 ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT--PEAAGALAERGEALRARLNALCANEGVAMQFTGI-GSLM 378 (454)
T ss_dssp HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC--HHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEE-TTEE
T ss_pred HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc--cChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeee-ceEE
Confidence 7887766432 2456788899999999988875322 23444555555555555543 3443333333 3344
Q ss_pred EeeCCCC-C--------CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHhcc
Q 015768 323 WARLPEK-H--------LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGGLVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 323 ~~~~~~~-~--------~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
.+.+... . .+ ...++..++ ++||++.|.. .+.+++. +|++|+++++++|++++.++..-
T Consensus 379 gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~Gv~~~p~~------~~~~s~~-~T~~dId~~l~al~~~l~~~~a~ 449 (454)
T 4ao9_A 379 NAHFVQGDVRSSEDLAAVDGRLRQLLFFHLL-NEDIYSSPRG------FVVLSLP-LTDADIDRYVAAIGSFIGGHGAL 449 (454)
T ss_dssp EEESCCSCCCSGGGGTTCCHHHHHHHHHHHH-HTTEECCTTC------EEECCTT-CCHHHHHHHHHHHHHHHHHSGGG
T ss_pred EEEEecCCCCCHHHHHhhhHHHHHHHHHHHH-HCCEEEcCCC------CEEEeCC-CCHHHHHHHHHHHHHHHHhcccc
Confidence 3443221 0 11 134555665 7899997743 3445555 59999999999999999987553
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.92 E-value=1.9e-24 Score=201.27 Aligned_cols=316 Identities=11% Similarity=0.036 Sum_probs=208.4
Q ss_pred CCcHHHHHHHHHhhcCCC---CCC----C-C--CCCCcHHHHHHHHHHHHhhcCCCC-CcEEE-eCChHHHHHHHHHHhc
Q 015768 43 QPPKMAMEKVKELVWDPS---ISK----Y-G--ADEGLPELRDALVKKLNQENKLYK-SSVMV-TAGANQAFVNIVLTLC 110 (400)
Q Consensus 43 ~~~~~v~~a~~~~~~~~~---~~~----y-~--~~~g~~~~~~~~a~~l~~~~~~~~-~~i~~-~~g~t~a~~~~~~~l~ 110 (400)
+.|++|++++.+.+.+.. ... + + ...-.++.|+.+++++ |++. ++|+| |+|+|++++.++..+.
T Consensus 37 ~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll----~~~~~~evif~t~~~T~a~n~ai~~l~ 112 (386)
T 3qm2_A 37 MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL----NIPSNYKVLFCHGGGRGQFAGVPLNLL 112 (386)
T ss_dssp CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH----TCCTTEEEEEEESCTTHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh----CCCCCceEEEEcCCchHHHHHHHHhcc
Confidence 468999999988775311 110 0 1 1234456666666666 7754 57888 6899999999999999
Q ss_pred CCCCEEEEeCCCccch--hHHHHhcCcEEEEeccCC--CCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC-CCHHH
Q 015768 111 DAGDSVVMFAPYYFNS--YMSFQMTGVTHILVGPCS--SKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY-IPERL 185 (400)
Q Consensus 111 ~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~--~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~-~~~~~ 185 (400)
++||+|++..-++++. ...++..| ++..+ +.+ ++|..++++.++..+++++ ++|.+++.+|.+|.+ .|
T Consensus 113 ~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v-~~~~~~~G~~~~~~~~~~~l~~~t--~lV~~~h~et~tG~~i~p--- 185 (386)
T 3qm2_A 113 GDKTTADYVDAGYWAASAIKEAKKYC-APQII-DAKITVDGKRAVKPMREWQLSDNA--AYLHYCPNETIDGIAIDE--- 185 (386)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHTTTS-EEEEE-ECEEEETTEEEECCGGGCCCCTTC--SCEEECSEETTTTEECCC---
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEE-ecCcccCCCCCCchHHHhhcCCCC--cEEEEECCcCCcCEecCc---
Confidence 9999987665555443 34456678 88888 777 5664467778888887766 889988888899996 78
Q ss_pred HHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCc--------HHHHHHH
Q 015768 186 LKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEV--------EGFATQL 257 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~--------~~~~~~l 257 (400)
+++|. +|+++++|.+++.+ ..+......+ +++.|.+|++|.+| +|+++.+++. +.+.+.-
T Consensus 186 i~~i~-----~g~~~~vDa~qs~g---~~pidv~~~~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~~~~ 253 (386)
T 3qm2_A 186 TPDFG-----PEVVVTADFSSTIL---SAPLDVSRYG--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSILDYT 253 (386)
T ss_dssp CCCCC-----TTCCEEEECTTTTT---SSCCCGGGCS--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGGCHH
T ss_pred hhhhc-----CCCEEEEEcccccC---CCCCCccccC--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHHHHH
Confidence 55543 79999999999843 3344333344 56789999998566 6777776321 0011000
Q ss_pred HH-hhccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCCccc-C--CCCceEEEeeCCCCCC
Q 015768 258 LK-VQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEGAVK-G--GEGAIYLWARLPEKHL 331 (400)
Q Consensus 258 ~~-~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~--~~~~~~~~~~~~~~~~ 331 (400)
.. .......++|.+...++..+++...+ .+++..++.+++++++++.|++++..... . ..+...+.+.++....
T Consensus 254 ~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~ 333 (386)
T 3qm2_A 254 VLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTL 333 (386)
T ss_dssp HHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGG
T ss_pred HHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccc
Confidence 00 11122346677777777777764223 36788888999999999999988541211 1 1233566777764222
Q ss_pred CHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 332 DDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 332 ~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
+ ..+...| +++||.+..|..+ .+.+|+|+.. +|++|++.+++.|+++.++
T Consensus 334 ~-~~~~~~L-~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 334 D-KVFLEES-FAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp H-HHHHHHH-HHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred c-HHHHHHH-HHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3 5666665 5889999887643 3569999988 8999999999999988765
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.92 E-value=5.1e-23 Score=189.95 Aligned_cols=324 Identities=14% Similarity=0.119 Sum_probs=220.4
Q ss_pred CCeEEcCCCCCCCCCcHHHHHHHHHhhcCCC---CCCCC---CCCCcHHHHHHHHHHHHhhcCCC-CCcEEE-eCChHHH
Q 015768 30 KNAVSLAQGVVYWQPPKMAMEKVKELVWDPS---ISKYG---ADEGLPELRDALVKKLNQENKLY-KSSVMV-TAGANQA 101 (400)
Q Consensus 30 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~---~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~-~~g~t~a 101 (400)
+..+.|..|- .+.|++|++++.+.+.+.. ...|. ......++.+...+.+++.+|++ +.+|+| |+|+|++
T Consensus 4 ~~~~~f~pgp--t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a 81 (361)
T 3m5u_A 4 MRKINFSAGP--STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQ 81 (361)
T ss_dssp CCCEECCSSS--CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHH
T ss_pred cceEeecCCC--CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHH
Confidence 3556676653 3467999999999876421 11110 11112345555566666666886 458888 9999999
Q ss_pred HHHHHHHhcCCCCEEEEeCCCccc--hhHHHHhcCcEEEEeccCCCCC-CCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768 102 FVNIVLTLCDAGDSVVMFAPYYFN--SYMSFQMTGVTHILVGPCSSKT-LHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (400)
Q Consensus 102 ~~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~-~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG 178 (400)
++.++..+. +||++++..-++++ +...++..|+++..+ +.+.++ +..+++. + +++++ ++|.+++.+|.+|
T Consensus 82 ~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~-~~~~~g~~~~~~~~-~--l~~~t--~lv~~~~~e~~tG 154 (361)
T 3m5u_A 82 FAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTV-ASSEESNFDHIPRV-E--FSDNA--DYAYICSNNTIYG 154 (361)
T ss_dssp HHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEE-EECTTTTSCSCCCC-C--CCTTS--SEEEEESEETTTT
T ss_pred HHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEE-ecccCcCCCcCChh-h--cCCCC--CEEEEeCCCCCcc
Confidence 999999998 78865332222323 345567789998888 777665 2245555 3 76665 9999998889999
Q ss_pred cCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHH
Q 015768 179 TYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLL 258 (400)
Q Consensus 179 ~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~ 258 (400)
.+++. | ++ +|+++++|.+++.+ ..+.... ..++++.|.+|++|.+| +|+++.+ +++.+++.
T Consensus 155 ~~~~~-----i---~~-~~~~~~vD~~q~~g---~~~id~~--~~d~~~~s~~K~~gp~G--~g~l~~~---~~~~~~~~ 215 (361)
T 3m5u_A 155 TQYQN-----Y---PK-TKTPLIVDASSDFF---SRKVDFS--NIALFYGGVQKNAGISG--LSCIFIR---KDMLERSK 215 (361)
T ss_dssp EECSS-----C---CC-CSSCEEEECGGGTT---SSCCCCT--TEEEEEEETTTTSSCTT--CEEEEEE---HHHHHHHH
T ss_pred eeCCc-----c---cc-cCCEEEEEcccccC---CCCCCcc--cCCEEEEechhccCCCc--cEEEEEc---HHHHhhhc
Confidence 98772 2 23 49999999999843 2233222 35788999999998666 6888888 66666554
Q ss_pred H-------------hhccCCcCccHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHHhccCCCC-cccC-C--CCc
Q 015768 259 K-------------VQDNIPICASIISQHLALYSLQTGPE--WVTERVKDLVRNREIIREALSPLGEG-AVKG-G--EGA 319 (400)
Q Consensus 259 ~-------------~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~-~--~~~ 319 (400)
. .......+++.....++..+++.-.+ .++++.++.+++.+++++.|++++++ .... + .+.
T Consensus 216 ~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~ 295 (361)
T 3m5u_A 216 NKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSL 295 (361)
T ss_dssp TCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCS
T ss_pred CCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCC
Confidence 3 01123356788888777777764222 36788888999999999999998853 3321 1 223
Q ss_pred eEEEeeCCC-CCCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHH
Q 015768 320 IYLWARLPE-KHLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEE 385 (400)
Q Consensus 320 ~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~ 385 (400)
..+.+.++. ...+ .++...| +++||.+.+|.. ..+.+|+|++. +|++|++.+++.|+++.++
T Consensus 296 ~ivsf~~~~~~~~~-~~~~~~L-~~~gI~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 296 MNVSFNIAKNKDLE-PLFVKEA-EEAGMIGLKGHR--ILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp SEEEEEESSCTTHH-HHHHHHH-HHTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCchhhh-HHHHHHH-HHCCCEEecCCC--ccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 466677764 1112 4666655 588999988753 23569999988 8999999999999988765
No 229
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=2.7e-23 Score=209.39 Aligned_cols=299 Identities=15% Similarity=0.086 Sum_probs=199.7
Q ss_pred HHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCC----CC-
Q 015768 76 ALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTL----HP- 150 (400)
Q Consensus 76 ~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~- 150 (400)
...+.+++.+|.+ +.+++++|+++++..++.++++|||+|+++.++|.++...++..|++++.+ +.+.+.+ .+
T Consensus 209 ~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v-~~~~~~~g~~g~i~ 286 (755)
T 2vyc_A 209 ESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYM-VPSRNRYGIIGPIY 286 (755)
T ss_dssp HHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEE-CCCBCTTSCBCCCC
T ss_pred HHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEE-eCCCCccccccccC
Confidence 3344444444754 557888888999999999999999999999999999999999999999998 6654322 24
Q ss_pred ----CHHHHHHhhccCCC--------CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCC---
Q 015768 151 ----DADWLEKTLETKPT--------PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGR--- 214 (400)
Q Consensus 151 ----~~e~l~~~l~~~~~--------~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~--- 214 (400)
|++.+++.+++.+. ++++++++| |++|.+.+ +++|+++|++||+++++|++|+... ++..
T Consensus 287 ~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~ 362 (755)
T 2vyc_A 287 PQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAD 362 (755)
T ss_dssp GGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTT
T ss_pred cCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhcccCcccCC
Confidence 89999999874321 348999998 79999999 8999999999999999999997432 2211
Q ss_pred --Cccc---c-CCCcEEEEeccccccCCCcce-eEEEEccCCcHHH-HHHHHHh-hccCCcCccHHHHHHHHHHhcCCc-
Q 015768 215 --KHCC---V-EGDHVVNLFSFSKAYGMMGWR-VGYIAYPSEVEGF-ATQLLKV-QDNIPICASIISQHLALYSLQTGP- 284 (400)
Q Consensus 215 --~~~~---~-~~~~~i~~~s~sK~~g~~g~~-~G~i~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~~~- 284 (400)
.... . ..++++++.|+||+++ |.+ .|+++.++....+ ..++... ....+.+++.+...++..+++...
T Consensus 363 ~~~~~g~~aD~~~~~~iv~~S~hK~L~--g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~ 440 (755)
T 2vyc_A 363 HYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDG 440 (755)
T ss_dssp SSSSCSCCCCCSSBEEEEEEETTTSSS--CCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHST
T ss_pred cchhcCCcCCccCCCeEEEECcccccc--CcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 1111 1 1235568999999874 544 5777665420001 1222221 122245566666665555554211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCC---------CcccCCC--------------------------------------
Q 015768 285 EWVTERVKDLVRNREIIREALSPLGE---------GAVKGGE-------------------------------------- 317 (400)
Q Consensus 285 ~~~~~~~~~~~~~~~~l~~~L~~~~~---------~~~~~~~-------------------------------------- 317 (400)
+...++.+++.++.+.+++.|+++++ +++..+.
T Consensus 441 ~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 520 (755)
T 2vyc_A 441 NSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHG 520 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccccccc
Confidence 11345566666666677766665432 2222211
Q ss_pred -----Cc------eEEEeeCCCC---------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHH
Q 015768 318 -----GA------IYLWARLPEK---------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAA 376 (400)
Q Consensus 318 -----~~------~~~~~~~~~~---------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~ 376 (400)
.+ ..+.+.++.. +.+...+..+|. ++||.+... ..+.+|+.++. .|+++++.++
T Consensus 521 ~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~-~~gI~~e~~----~~~~v~~~~~~g~t~~~~~~l~ 595 (755)
T 2vyc_A 521 FKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLG-RHGIVPTRT----TDFQIMFLFSMGVTRGKWGTLV 595 (755)
T ss_dssp CTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHH-TTTCCCSEE----CSSEEEEECCTTCCTTTTHHHH
T ss_pred ccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHH-HCCCEEeec----CCCeEEEEECCCCCHHHHHHHH
Confidence 11 2344555431 234578888774 799887542 46889999888 8999999999
Q ss_pred HHHHHHHHHHh
Q 015768 377 DRLRRGLEELV 387 (400)
Q Consensus 377 ~~l~~~l~~~~ 387 (400)
+.|.+..+.+.
T Consensus 596 ~al~~~~~~~~ 606 (755)
T 2vyc_A 596 NTLCSFKRHYD 606 (755)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999887664
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.91 E-value=6e-23 Score=194.99 Aligned_cols=347 Identities=14% Similarity=0.083 Sum_probs=223.4
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCC-CCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKL-YKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~-~~~~i~~~~g~t~a~ 102 (400)
.+|+.++||..+. ..++ .+|++++++.+.+.+.....+... ..+...++++.|.+.... ..+.++|++++++|+
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~ 138 (456)
T 4atq_A 61 VDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVT--PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAV 138 (456)
T ss_dssp TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTS--CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHH
T ss_pred CCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCcc--CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHH
Confidence 4578899998874 4554 789999999988875321111111 123334566666665533 356899999999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCccchhHHHHh-cC-------------cEEEEeccCCC-----CCCCCCHHHHHHhhc-
Q 015768 103 VNIVLTLC--DAGDSVVMFAPYYFNSYMSFQM-TG-------------VTHILVGPCSS-----KTLHPDADWLEKTLE- 160 (400)
Q Consensus 103 ~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~-~g-------------~~~~~~~~~~~-----~~~~~~~e~l~~~l~- 160 (400)
+.+++... ....+|+....+|++....... .+ ..+..+ |... .....+.+.+++.+.
T Consensus 139 e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~ 217 (456)
T 4atq_A 139 ENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRM-PMSYPFREENPEITGAEAAKRAITM 217 (456)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEE-CCCCGGGCSSTTCCHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceec-ccccccccCCCcccHHHHHHHHHHH
Confidence 99998764 2347899999999987643321 11 123333 3221 000112333333322
Q ss_pred -----cCCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEEecccccc
Q 015768 161 -----TKPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNLFSFSKAY 234 (400)
Q Consensus 161 -----~~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 234 (400)
....+.+++++..+...|.+ .+.+++++|.++|++||+++|+||++.++...|..+.....+....+-+++|.+
T Consensus 218 ~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~l 297 (456)
T 4atq_A 218 IEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGI 297 (456)
T ss_dssp HHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGG
T ss_pred HHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcc
Confidence 11236788888666667764 678899999999999999999999999876555433222222111133567999
Q ss_pred CCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhcc----CCC
Q 015768 235 GMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREIIREALSP----LGE 310 (400)
Q Consensus 235 g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~ 310 (400)
| .|+++|.++.+ +++.+.+.......+++.++++..++.+.|+..++ +...++.++..+++.+.|++ ++.
T Consensus 298 g-gg~P~~av~~~---~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~ 371 (456)
T 4atq_A 298 A-GGLPLSAITGR---ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQ--HDLNGRARHIEELALGKLRELAAELSA 371 (456)
T ss_dssp G-TTSSCEEEEEE---HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred c-CcCCceeeEec---HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 7 88999999999 78877777666778999999999999998875221 22334444444445444443 221
Q ss_pred -----CcccCCCCceEEEeeCCCCC---CC---HHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHH
Q 015768 311 -----GAVKGGEGAIYLWARLPEKH---LD---DFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADR 378 (400)
Q Consensus 311 -----~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~ 378 (400)
+.-++.. |.++-+.+.... .+ ..++...++ ++|+++.++.. ..+.|||.+.. .|++++++++++
T Consensus 372 ~~~~~v~~VRG~-Gl~~giel~~~~~~~~~~~~~~~v~~~~~-~~Gvl~~~~g~--~~~~irl~PpL~it~~~id~~l~~ 447 (456)
T 4atq_A 372 GGGSVVGDIRGR-GAMLAIELVQPGSKEPNAELTKAVAAACL-KEGVIILTCGT--YGNVIRLLPPLVISDELLIDGLEV 447 (456)
T ss_dssp ----CEEEEEEE-TTEEEEEEBCTTSCCBCHHHHHHHHHHHH-HTTEECEEECT--TSCEEEECCCTTCCHHHHHHHHHH
T ss_pred ccCCceEEeeec-ceEEEEEEecCCCCCcCHHHHHHHHHHHH-HCCCEEEecCC--CCCEEEEECCCCCCHHHHHHHHHH
Confidence 1112333 455555543211 01 345666665 89999876432 35789999886 899999999999
Q ss_pred HHHHHHHH
Q 015768 379 LRRGLEEL 386 (400)
Q Consensus 379 l~~~l~~~ 386 (400)
|.+++++.
T Consensus 448 l~~al~a~ 455 (456)
T 4atq_A 448 LAAAIKAH 455 (456)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 99999864
No 231
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.90 E-value=1.5e-21 Score=186.04 Aligned_cols=346 Identities=14% Similarity=0.099 Sum_probs=224.0
Q ss_pred hcCCCeEEcCCCC--CCCC-CcHHHHHHHHHhhcCCCCCCCCCCC-CcHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHH
Q 015768 27 RGAKNAVSLAQGV--VYWQ-PPKMAMEKVKELVWDPSISKYGADE-GLPELRDALVKKLNQENKLYKSSVMVTAGANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~-g~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~ 102 (400)
.+|+.++|+..+. +.++ .+|++.+++.+.+.+.. .++... ...+...++++.|.+......+.++|++++++|+
T Consensus 64 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~ 141 (473)
T 4e3q_A 64 VNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEAN 141 (473)
T ss_dssp TTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHH
T ss_pred CCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHH
Confidence 4578899998876 3444 68999999999887632 121111 1234455677777776655567899999999999
Q ss_pred HHHHHHhc-------CCC-CEEEEeCCCccchhHHH-HhcCc-----------EEEEeccCC------CCCCC------C
Q 015768 103 VNIVLTLC-------DAG-DSVVMFAPYYFNSYMSF-QMTGV-----------THILVGPCS------SKTLH------P 150 (400)
Q Consensus 103 ~~~~~~l~-------~~g-d~vlv~~p~~~~~~~~~-~~~g~-----------~~~~~~~~~------~~~~~------~ 150 (400)
+.+++... +++ .+|+....+|++..... ...|- ....+ +.. +.+.. .
T Consensus 142 e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~ 220 (473)
T 4e3q_A 142 DTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHL-TCPHYWRYGEEGETEEQFVAR 220 (473)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEE-CCCCHHHHSCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCccccc-CCCcccccccccchhhHHHHH
Confidence 99999753 233 57899999998855433 22210 12222 211 11100 0
Q ss_pred CHHHHHHhhc-c-CCCCeEEEEeCCCCCCccC-CCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCccccCCCcEEEE
Q 015768 151 DADWLEKTLE-T-KPTPKLVSVVNPGNPSGTY-IPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVEGDHVVNL 227 (400)
Q Consensus 151 ~~e~l~~~l~-~-~~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~i~~ 227 (400)
..+++++.+. . ...+.+|+++..+...|.+ .+++++++|.++|++||+++|.||++.+|...+..+.....+....+
T Consensus 221 ~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi 300 (473)
T 4e3q_A 221 LARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDA 300 (473)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSE
T ss_pred HHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCCh
Confidence 1234455444 1 1225677777667667764 67789999999999999999999999988655543222111111113
Q ss_pred eccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-------hccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 015768 228 FSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV-------QDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNRE 299 (400)
Q Consensus 228 ~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 299 (400)
-+++|.++ .| +++|.++.+ +++.+.+... .+..+++.++++..++.+.|+..++ +...++.++..+
T Consensus 301 ~t~~K~l~-gG~~Pl~av~~~---~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~--~~l~~~~~~~g~ 374 (473)
T 4e3q_A 301 IISSKNLT-AGFFPMGAVILG---PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN--EGLAENVRRLAP 374 (473)
T ss_dssp EEECGGGG-TTSSCCEEEEEC---HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH--SSHHHHHHHHHH
T ss_pred HHhccccc-CCCCCccccccc---HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc--ccHHHHHHHHHH
Confidence 35689997 55 899999999 7887776542 3467888999999999988875221 234445555666
Q ss_pred HHHHHhccC---CCCcccCCCCceEEEeeCCCCC----------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc
Q 015768 300 IIREALSPL---GEGAVKGGEGAIYLWARLPEKH----------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG 366 (400)
Q Consensus 300 ~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~ 366 (400)
+|.+.|+++ +.+.-+... |.+.-+.+.... .....+...++ ++|+++.+. .+.+||++..
T Consensus 375 ~l~~~L~~l~~~~~v~~vRG~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~-~~Gll~~~~-----g~~i~l~PPL 447 (473)
T 4e3q_A 375 RFEERLKHIAERPNIGEYRGI-GFMWALEAVKDKASKTPFDGNLSVSERIANTCT-DLGLICRPL-----GQSVVLCPPF 447 (473)
T ss_dssp HHHHHHHHHTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECEEE-----TTEEEECCCT
T ss_pred HHHHHHHHHhcCCCeeEEeec-ceEEEEEEecCccccccccccHHHHHHHHHHHH-HCCcEEEec-----CCEEEEeCCC
Confidence 666666553 332222333 444444432111 01345666665 899999873 4689999876
Q ss_pred -CCHHHHHHHHHHHHHHHHHHhc
Q 015768 367 -LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 367 -~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+|++++++++++|.++++++..
T Consensus 448 ~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 448 ILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998765
No 232
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.88 E-value=5.6e-21 Score=175.34 Aligned_cols=359 Identities=16% Similarity=0.131 Sum_probs=243.4
Q ss_pred hhcCchHHHHHHHHHhcCCCeEEcCCCCCCCCCcHHHHHHHHHhhcCCCCCC------CCCCCCcHHHHHHHHHHHHhhc
Q 015768 12 LETEMPIMVQIQELVRGAKNAVSLAQGVVYWQPPKMAMEKVKELVWDPSISK------YGADEGLPELRDALVKKLNQEN 85 (400)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~~~~~~a~~l~~~~ 85 (400)
...+...+..+.+...++..-|+|-.++|.. ++.|++++...+.+....+ |+...-.+.++....++..+.+
T Consensus 36 ~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~--S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF 113 (490)
T 3ou5_A 36 SDSDPEMWELLQREKDRQCRGLELIASENFC--SRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAF 113 (490)
T ss_dssp HHHCHHHHHHHHHHHHHHHHSEECCTTCCCC--CHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHT
T ss_pred hhhCHHHHHHHHHHHHHHHcCceEecCCCcC--CHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHh
Confidence 3455667777777888888889998888775 5999999988887643333 3334556678888888888889
Q ss_pred CCCCC----cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHH--------HhcC--cEEEEeccCCCCCCCCC
Q 015768 86 KLYKS----SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSF--------QMTG--VTHILVGPCSSKTLHPD 151 (400)
Q Consensus 86 ~~~~~----~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~~ 151 (400)
|++.. +|.. .+++.|+..++.+|++|||+|+..+..+.++...- ...| .+.+.+ +++++...+|
T Consensus 114 ~a~~A~w~VNVQP-~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y-~vd~~t~~ID 191 (490)
T 3ou5_A 114 DLDPAQWGVNVQP-YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPY-KLNPKTGLID 191 (490)
T ss_dssp TCCTTTEEEECCC-SSHHHHHHHHHHHHCC-CCCEECBC----------------------------CB-CEETTTTEEC
T ss_pred CCCccccCCCCCc-CCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccccccccccc-ccCCCCCccc
Confidence 98765 3444 45669999999999999999999888876665321 1122 255666 6777777899
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccccccc-CCCCccccCCCcEEEEecc
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMY-DGRKHCCVEGDHVVNLFSF 230 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~i~~~s~ 230 (400)
.|.++++..... ||+|+.-...+| ..+| .+++.++|++.|.++++|.+|..+.. ++....+... .+++++|.
T Consensus 192 yd~~~~~A~~~k-PklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-ADvVTtTT 264 (490)
T 3ou5_A 192 YNQLALTARLFR-PRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-ADIVTTTT 264 (490)
T ss_dssp HHHHHHHHHHHC-CSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CSEEEEES
T ss_pred HHHHHHHHhhcC-CCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ceEEeccc
Confidence 999999887544 699987644444 6778 77777888899999999999975554 3332233333 67999999
Q ss_pred ccccCCCcceeEEEEccCCc------------HHHHHHHHHhhccCCcCccHH-HHHHHHHHhcC-CcHHHHHHHHHHHH
Q 015768 231 SKAYGMMGWRVGYIAYPSEV------------EGFATQLLKVQDNIPICASII-SQHLALYSLQT-GPEWVTERVKDLVR 296 (400)
Q Consensus 231 sK~~g~~g~~~G~i~~~~~~------------~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~l~~-~~~~~~~~~~~~~~ 296 (400)
||.+ +|.|.|.|.++++. .++.+++...-.....+.+-. ...+.+.++.+ ....++.+.++..+
T Consensus 265 HKTL--rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~ 342 (490)
T 3ou5_A 265 HKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLK 342 (490)
T ss_dssp SSTT--CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cccc--cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHH
Confidence 9998 68899999987521 146677776554333333322 22333333332 23567899999999
Q ss_pred HHHHHHHHhccCCCCcccCCCCceEEEeeCCCCCCCHHHHHHHHHHhcCeEEe----CCCc-cCCCCeEEEEecc-----
Q 015768 297 NREIIREALSPLGEGAVKGGEGAIYLWARLPEKHLDDFEVVRWLAHRHGVVVI----PGGA-CGCRGHLRISFGG----- 366 (400)
Q Consensus 297 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~----~g~~-~~~~~~iRi~~~~----- 366 (400)
|++.|.+.|.+.|...+.+......+++++.....++.+....| ++.||.+. |+.. ...+..|||+...
T Consensus 343 NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~L-e~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG 421 (490)
T 3ou5_A 343 NARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVL-ELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQ 421 (490)
T ss_dssp HHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHH-HHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTT
T ss_pred HHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHH-HHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCC
Confidence 99999999999887445566657788888876555776666654 68999985 3321 0125689998652
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 015768 367 LVEDDCKAAADRLRRGLE 384 (400)
Q Consensus 367 ~~~~~~~~~~~~l~~~l~ 384 (400)
+.++|+.+..+.|.+++.
T Consensus 422 ~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 422 FREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 678899999998888875
No 233
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.87 E-value=1.1e-19 Score=179.99 Aligned_cols=298 Identities=14% Similarity=0.098 Sum_probs=193.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCC
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLH 149 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 149 (400)
..++++.+|+++ |.+ ..+++++|++.|+..++.++++|||+|+++.++|.++...++..|++++++ +.+.+.+.
T Consensus 197 i~eaE~~lA~~f----Ga~-~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v-~~~~~~~g 270 (715)
T 3n75_A 197 HKEAEQYIARVF----NAD-RSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYF-RPTRNAYG 270 (715)
T ss_dssp HHHHHHHHHHHH----TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEE-CCCBCTTC
T ss_pred HHHHHHHHHHHh----CCC-CceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEE-eccccccc
Confidence 345555555555 642 345666777899999999999999999999999999999999999999999 65433343
Q ss_pred ----C-----CHHHHHHhhccCCC---CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccc-cCCC-C
Q 015768 150 ----P-----DADWLEKTLETKPT---PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFM-YDGR-K 215 (400)
Q Consensus 150 ----~-----~~e~l~~~l~~~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~-~~~~-~ 215 (400)
+ |++.+++++++.+. ++++++++| |++|.+.+ +++|.++|++++ +++||+|+.+. ++.. +
T Consensus 271 i~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~~~~~ 344 (715)
T 3n75_A 271 ILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (715)
T ss_dssp CBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGSGGGT
T ss_pred cccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccccCCccc
Confidence 3 89999999984322 348999999 99999999 778888887653 79999998553 3221 1
Q ss_pred -ccccC----CCcE-EEEeccccccCCCcc-eeEEEEccCCcHHHHHHHHHhhc-cCCcCccHHHHHHHHHHhcCCc-HH
Q 015768 216 -HCCVE----GDHV-VNLFSFSKAYGMMGW-RVGYIAYPSEVEGFATQLLKVQD-NIPICASIISQHLALYSLQTGP-EW 286 (400)
Q Consensus 216 -~~~~~----~~~~-i~~~s~sK~~g~~g~-~~G~i~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~ 286 (400)
..... .+.. +++.|+||+++ |+ ..|++..++.. ..+++..... ..+.+++.+...++..+++... ..
T Consensus 345 ~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i--~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~ 420 (715)
T 3n75_A 345 GKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDV--NEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA 420 (715)
T ss_dssp TSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCC--CHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHH
T ss_pred cccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchh--hHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhc
Confidence 11221 2332 55899999985 43 45888776531 1222332222 2355677777776666664322 13
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCC------CcccCCC------------------------C-----ceEEEeeCCCC--
Q 015768 287 VTERVKDLVRNREIIREALSPLGE------GAVKGGE------------------------G-----AIYLWARLPEK-- 329 (400)
Q Consensus 287 ~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~~~------------------------~-----~~~~~~~~~~~-- 329 (400)
..++++++.++.+++++.|++++. +++..+. + ..-+++.++..
T Consensus 421 g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~ 500 (715)
T 3n75_A 421 GKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEK 500 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCT
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCC
Confidence 355667777777777777765431 1111111 0 11233444431
Q ss_pred -------CCCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 330 -------HLDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 330 -------~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+..+..+.++| +++||.+.-.. ...+-+-++. .++++++.++++|.+.-+.+.+
T Consensus 501 ~G~~~~~Gi~g~~~~~~L-~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~~~ 562 (715)
T 3n75_A 501 DGTMSDFGIPASIVAKYL-DEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRAFDL 562 (715)
T ss_dssp TSCBCSSCCCHHHHHHHH-HHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccccCCCcHHHHHHHH-HHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 24567788877 57899885432 3444444443 5889999988888877665543
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.84 E-value=5.7e-21 Score=193.81 Aligned_cols=339 Identities=11% Similarity=0.030 Sum_probs=214.1
Q ss_pred CeEEcCCCC--CCCC-C-cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCC-CCcEEEeCChHHHHHHH
Q 015768 31 NAVSLAQGV--VYWQ-P-PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLY-KSSVMVTAGANQAFVNI 105 (400)
Q Consensus 31 ~~i~~~~~~--~~~~-~-~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~-~~~i~~~~g~t~a~~~~ 105 (400)
.++|+.++. +.++ . +|++.+++.+.+.+.....+ .. ...+...+++++|.+..+-. .+.++|+++|++|++.+
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~-~~-~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~A 458 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMF-PE-NVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIA 458 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCC-TT-EECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccc-cc-cCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHH
Confidence 678887763 4455 4 89999999988875321111 11 12244456777777665433 47899999999999999
Q ss_pred HHHhc-----CC------------CCEEEEeCCCccchh-HHHHhcCc---------------EEE-------------E
Q 015768 106 VLTLC-----DA------------GDSVVMFAPYYFNSY-MSFQMTGV---------------THI-------------L 139 (400)
Q Consensus 106 ~~~l~-----~~------------gd~vlv~~p~~~~~~-~~~~~~g~---------------~~~-------------~ 139 (400)
++... .. ..+|+....+|++-. ..+...|. .+. .
T Consensus 459 lK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 538 (831)
T 4a0g_A 459 LKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWN 538 (831)
T ss_dssp HHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEE
T ss_pred HHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceE
Confidence 98862 12 247888899987754 33333321 000 1
Q ss_pred eccCCCC---------CCCCC------------------HHHHHHhhcc------CCCCeEEEEeCC-CCCCccC-CCHH
Q 015768 140 VGPCSSK---------TLHPD------------------ADWLEKTLET------KPTPKLVSVVNP-GNPSGTY-IPER 184 (400)
Q Consensus 140 ~~~~~~~---------~~~~~------------------~e~l~~~l~~------~~~~~~v~l~~p-~nptG~~-~~~~ 184 (400)
+ +.... .+. + ++.|++.+.. ...+++|+++.. ++..|.. +|.+
T Consensus 539 ~-~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~ 616 (831)
T 4a0g_A 539 I-SLPESFSEIAPEYGTFT-SRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPL 616 (831)
T ss_dssp E-ECCTTSCCCCSSTTEES-CHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHH
T ss_pred e-cCCcccccccccccccc-chhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHH
Confidence 1 11100 000 1 2567777752 223577777764 7877875 5889
Q ss_pred HHHHHHHHHHHcCCEEEEcccccccccCCCCccccC--CCcEEEEeccccccCCCc-ceeEEEEccCCcHHHHHHHHHh-
Q 015768 185 LLKRISDLCKAAGSWLVVDNTYEYFMYDGRKHCCVE--GDHVVNLFSFSKAYGMMG-WRVGYIAYPSEVEGFATQLLKV- 260 (400)
Q Consensus 185 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~g~~g-~~~G~i~~~~~~~~~~~~l~~~- 260 (400)
++++|.++|++||+++|+||++.+|...|..+.... -..++ .+++|.++ +| +++|+++++ +++++.+...
T Consensus 617 ~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi--itlsK~L~-gG~~Plgav~~~---~~i~~~~~~~~ 690 (831)
T 4a0g_A 617 FQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDI--ACFAKLLT-GGMVPLAVTLAT---DAVFDSFSGDS 690 (831)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSE--EEECGGGG-TTSSCCEEEEEC---HHHHHTTCSSC
T ss_pred HHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcE--EEEecccc-cCccCcEEEEEC---HHHHHHHhccc
Confidence 999999999999999999999998766554332111 11223 36899997 57 799999999 7887776532
Q ss_pred -----hccCCcCccHHHHHHHHHHhcCC--cHHHHHHHHHHHHH----HHHHHHHhccCCCCcccCCCCceEEEeeCCCC
Q 015768 261 -----QDNIPICASIISQHLALYSLQTG--PEWVTERVKDLVRN----REIIREALSPLGEGAVKGGEGAIYLWARLPEK 329 (400)
Q Consensus 261 -----~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~----~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 329 (400)
....+++.++++..++.+.|+.. ++...+..+..... .+.+.+.+++.+.+..+... |.+..+.+...
T Consensus 691 ~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~-Gl~~~iel~~~ 769 (831)
T 4a0g_A 691 KLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVI-GTLFALELKAD 769 (831)
T ss_dssp GGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEE-TTEEEEEEC--
T ss_pred ccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeec-ccEEEEEEecC
Confidence 24567888999999988888741 11111111100111 12344555556654444444 55555565321
Q ss_pred C-------CCHHHHHHHHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 330 H-------LDDFEVVRWLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 330 ~-------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
. ....++...++ ++||++.|+ .+.+||++.. ++++++++++++|.++++++
T Consensus 770 ~~~~~~~~~~a~~~~~~l~-e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 770 ASNSGYASLYAKSLLIMLR-EDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp -------CHHHHHHHHHHH-HTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred ccccccchHHHHHHHHHHH-HCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 0 11345676665 799999874 4799999665 79999999999999998765
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.82 E-value=4.3e-18 Score=157.06 Aligned_cols=309 Identities=13% Similarity=0.062 Sum_probs=199.7
Q ss_pred HHHHHHHHHHHhhcCCCC-CcEEEeCChHHHHHHHHHHhcCC----CCEEEEeCCCccchhHHHHhcCcEEEEeccC-CC
Q 015768 72 ELRDALVKKLNQENKLYK-SSVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPC-SS 145 (400)
Q Consensus 72 ~~~~~~a~~l~~~~~~~~-~~i~~~~g~t~a~~~~~~~l~~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~ 145 (400)
.+.+.++-.+-+..|++. ...++++|+|.++..++.+.+++ ||.|+++..+|.++..++..+|++++++.|. ++
T Consensus 116 ~ltn~l~ld~L~~~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~ 195 (501)
T 3hl2_A 116 KITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEG 195 (501)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEET
T ss_pred HHHHHHHHHHHHHcCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecc
Confidence 344444444444448874 56899999998888888777653 4999999999999999999999999999442 23
Q ss_pred CCCCCCHHHHHHhhccCC-CCeEEEEe-CCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCC--CccccCC
Q 015768 146 KTLHPDADWLEKTLETKP-TPKLVSVV-NPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGR--KHCCVEG 221 (400)
Q Consensus 146 ~~~~~~~e~l~~~l~~~~-~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~--~~~~~~~ 221 (400)
+...+|++.++++|++.. ...++++. .+.|..|.+-+ +++|+++|++||+++++|+||+....... +......
T Consensus 196 ~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~ 272 (501)
T 3hl2_A 196 DELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV 272 (501)
T ss_dssp TEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhc
Confidence 346789999999998532 23444444 44554556677 99999999999999999999985431110 0111122
Q ss_pred C-cEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 015768 222 D-HVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNREI 300 (400)
Q Consensus 222 ~-~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 300 (400)
+ .|+++.|.+|.+- ..++.|.+..++ +++++++........ ...++.......+..+.+.+++..++..++.++
T Consensus 273 GrAD~vVqS~HK~ll-vpIGG~ii~~~d--~e~l~~~~~~yPGr~--S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~ 347 (501)
T 3hl2_A 273 GRIDAFVQSLDKNFM-VPVGGAIIAGFN--DSFIQEISKMYPGRA--SASPSLDVLITLLSLGSNGYKKLLKERKEMFSY 347 (501)
T ss_dssp SCCCEEEEEHHHHHC-CCSSCEEEEESC--HHHHHHHHHTSCSCB--CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEecccccce-eecCceEEEeCC--HHHHHHHHHhCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 7788999999984 334446665665 677777755432222 233333333344443456678888888888889
Q ss_pred HHHHhccCCC---CcccCCC-CceEEEeeCCCCC----CCHHHHHHHHHHhcCe---EE-eCCC----------ccC---
Q 015768 301 IREALSPLGE---GAVKGGE-GAIYLWARLPEKH----LDDFEVVRWLAHRHGV---VV-IPGG----------ACG--- 355 (400)
Q Consensus 301 l~~~L~~~~~---~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi---~v-~~g~----------~~~--- 355 (400)
|++.|+++.. .++.... ...-+-+.+.... .+...+-..|. .++| .+ .+|. .|+
T Consensus 348 L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf-~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~ 426 (501)
T 3hl2_A 348 LSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLF-TRQVSGARVVPLGSMQTVSGYTFRGFMSHT 426 (501)
T ss_dssp HHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHH-HTTCCSCEEECTTCCEEETTEEESSTTTTS
T ss_pred HHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHH-hcCCCcceeecCCCceEECCeeecCcccCC
Confidence 8888887421 2333222 2223333443211 11334444444 4554 33 3444 333
Q ss_pred ---CCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhcc
Q 015768 356 ---CRGHLRISFGG-LVEDDCKAAADRLRRGLEELVKD 389 (400)
Q Consensus 356 ---~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~~ 389 (400)
...++=++.+. ++.+|++.++++|.+++.++.++
T Consensus 427 ~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 427 NNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp SCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 13577777665 89999999999999999998754
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.79 E-value=2.3e-17 Score=154.41 Aligned_cols=310 Identities=14% Similarity=0.058 Sum_probs=199.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCC-cEEEeCChHHHHHHHHHHhcCC----CCEEEEeCCCccchhHHHHhcCcEEEEeccC-
Q 015768 70 LPELRDALVKKLNQENKLYKS-SVMVTAGANQAFVNIVLTLCDA----GDSVVMFAPYYFNSYMSFQMTGVTHILVGPC- 143 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~-~i~~~~g~t~a~~~~~~~l~~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~- 143 (400)
...+.+.+..++.+..|++.. ..++++|+|.++..++.+.+++ ++.|+++..+|.++..++...|+.++.+.|.
T Consensus 96 ~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~ 175 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL 175 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeee
Confidence 456788888888888898754 4588999985555555555433 7999999999999999999999998888332
Q ss_pred CCCCCCCCHHHHHHhhccCC-CCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcCCEEEEcccccccccCCCCc--ccc
Q 015768 144 SSKTLHPDADWLEKTLETKP-TPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYFMYDGRKH--CCV 219 (400)
Q Consensus 144 ~~~~~~~~~e~l~~~l~~~~-~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~--~~~ 219 (400)
+++.+.+|++.++++|+..+ ..+++++.+| ++.+|.+-| +++|+++|++||+++++|+||+.......+. ...
T Consensus 176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~ 252 (450)
T 3bc8_A 176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA 252 (450)
T ss_dssp ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHh
Confidence 12345789999999997432 1345555555 455678888 9999999999999999999998533211000 111
Q ss_pred C-CCcEEEEeccccccCCCcceeEEEEccCCcHHHHHHHHHhhccCCcCccHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 015768 220 E-GDHVVNLFSFSKAYGMMGWRVGYIAYPSEVEGFATQLLKVQDNIPICASIISQHLALYSLQTGPEWVTERVKDLVRNR 298 (400)
Q Consensus 220 ~-~~~~i~~~s~sK~~g~~g~~~G~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 298 (400)
. ...+.++.|.+|++. .....+++..++ ++..+++....... ....++...+...+..+.+.+.+..++..++.
T Consensus 253 ~~~~AD~~v~S~HK~l~-a~~~~~~l~~rd--~~~~~~~~~~~~g~--~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a 327 (450)
T 3bc8_A 253 RVGRIDAFVQSLDKNFM-VPVGGAIIAGFN--EPFIQDISKMYPGR--ASASPSLDVLITLLSLGCSGYRKLLKERKEMF 327 (450)
T ss_dssp HHSCCCEEEEEHHHHHS-CCSSCEEEEESC--HHHHHHHHHHSCSC--BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEECCccCCC-chhccEEEEecC--HHHHHHHHHHhhcC--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 256678889999995 445667777665 66666665433211 11223344444444435556677777778888
Q ss_pred HHHHHHhccCC---CCcccCCCC-ceEEEeeCCC----CCCCHHHHHHHHHHhcC---eEEeC---------------CC
Q 015768 299 EIIREALSPLG---EGAVKGGEG-AIYLWARLPE----KHLDDFEVVRWLAHRHG---VVVIP---------------GG 352 (400)
Q Consensus 299 ~~l~~~L~~~~---~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~l~~~~g---i~v~~---------------g~ 352 (400)
+++++.|++++ +.++.+... +.-..+.++. ...|..++.-.+. ..| ..+.+ |.
T Consensus 328 ~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~-~~g~sG~~v~~~~~~~~~~~~~l~~~gi 406 (450)
T 3bc8_A 328 VYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLF-TRQVSGARAVPLGNVQTVSGHTFRGFMS 406 (450)
T ss_dssp HHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHH-HTTCCSCEEECSCCEEEETTEEEETTTT
T ss_pred HHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEec-CCCCccceeeecccccchhHHHHHHcCC
Confidence 88888887665 445544321 1111122221 0124556665553 344 33321 11
Q ss_pred cc--CCCCeEEEEecc-CCHHHHHHHHHHHHHHHHHHhc
Q 015768 353 AC--GCRGHLRISFGG-LVEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 353 ~~--~~~~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~~~ 388 (400)
.. ....++-+.++. .+++|++.++++|++.+.++.+
T Consensus 407 ~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 407 HADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp TSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 124566666555 7999999999999999887654
No 237
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=80.15 E-value=16 Score=27.85 Aligned_cols=109 Identities=14% Similarity=0.104 Sum_probs=64.9
Q ss_pred CCCCCcEEEeCCh--HHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768 86 KLYKSSVMVTAGA--NQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (400)
Q Consensus 86 ~~~~~~i~~~~g~--t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~ 163 (400)
.+|...++++-+. -..+.-+...+.+-|-+|+.+. +....++..|+.+..+....+.|..-+..++.+.+..+.
T Consensus 21 ~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~----GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~ 96 (143)
T 2yvq_A 21 KIPQKGILIGIQQSFRPRFLGVAEQLHNEGFKLFATE----ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGS 96 (143)
T ss_dssp CCCCSEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEH----HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTS
T ss_pred CCCCCCEEEEecccchHHHHHHHHHHHHCCCEEEECc----hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCC
Confidence 3443345665443 4555556667777788888876 445677888988777722222211001124666676554
Q ss_pred CCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 164 TPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
+.+|+-+ |.+...+..+-..|.+.|-+||++++..
T Consensus 97 -i~lVInt----~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 97 -IDLVINL----PNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp -CCEEEEC----CCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred -ceEEEEC----CCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 5666633 2332234567888999999999998854
No 238
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=61.69 E-value=75 Score=27.06 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=70.8
Q ss_pred HhcCCCeEEcCCCCCCCC-CcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhh-cCCCCCcEEEeC-Ch--HH
Q 015768 26 VRGAKNAVSLAQGVVYWQ-PPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQE-NKLYKSSVMVTA-GA--NQ 100 (400)
Q Consensus 26 ~~~~~~~i~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~-~~~~~~~i~~~~-g~--t~ 100 (400)
-+.|-|+|.++..+++.- --|.+.++..+++.++. ....+-+.+.+ +++. ..++ =++++- +. ..
T Consensus 42 ~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~--------~~~~~~~~v~~-ir~~~~~~P--ivlm~Y~npv~~~ 110 (267)
T 3vnd_A 42 VDNGADALELGFPFSDPLADGPVIQGANLRSLAAGT--------TSSDCFDIITK-VRAQHPDMP--IGLLLYANLVFAN 110 (267)
T ss_dssp HHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTC--------CHHHHHHHHHH-HHHHCTTCC--EEEEECHHHHHHH
T ss_pred HHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCC--------CHHHHHHHHHH-HHhcCCCCC--EEEEecCcHHHHh
Confidence 356677777776654432 23444455555555431 11222222222 2222 1222 233322 11 12
Q ss_pred HHHHHHHHhcCCC-CEEEEeCCCcc---chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCC
Q 015768 101 AFVNIVLTLCDAG-DSVVMFAPYYF---NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNP 176 (400)
Q Consensus 101 a~~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~np 176 (400)
++...+..+.+.| |.+++++-.+. .+...++..|.+.+.+ -.+ . -+.+.++...+... ..|++.+..-.
T Consensus 111 g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~l-iaP-~---t~~eri~~i~~~~~--gfvY~vS~~Gv 183 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFI-APP-N---ADADTLKMVSEQGE--GYTYLLSRAGV 183 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECE-ECT-T---CCHHHHHHHHHHCC--SCEEESCCCCC
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEE-ECC-C---CCHHHHHHHHHhCC--CcEEEEecCCC
Confidence 3445555555555 77777655542 2445667778776654 211 1 13456665555332 45665444444
Q ss_pred CccCC-CHHHHHHHHHHHHHc-CCEEEE
Q 015768 177 SGTYI-PERLLKRISDLCKAA-GSWLVV 202 (400)
Q Consensus 177 tG~~~-~~~~l~~i~~l~~~~-~~~li~ 202 (400)
||..- -.+++.++.+.++++ ++++++
T Consensus 184 TG~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 184 TGTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp C--------CHHHHHHHHHTTTCCCEEE
T ss_pred CCCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 66542 112244444444443 445554
No 239
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=56.68 E-value=13 Score=32.55 Aligned_cols=74 Identities=7% Similarity=-0.014 Sum_probs=45.8
Q ss_pred hHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEE
Q 015768 127 YMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLV 201 (400)
Q Consensus 127 ~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li 201 (400)
++.+...|+-+..+-|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++++|
T Consensus 8 ~~~~~~~Gv~~a~vTPf~~dg-~iD~~~l~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi 85 (301)
T 1xky_A 8 HHMIDFGTIATAMVTPFDING-NIDFAKTTKLVNYLIDNGTTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVDKRVPVI 85 (301)
T ss_dssp --CCCCCSEEEECCCCBCTTS-SBCHHHHHHHHHHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred ccccCCCceEEeeECcCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCceEE
Confidence 334444565433332666555 789999988876 11224676654 455556678999999999987653 46665
Q ss_pred E
Q 015768 202 V 202 (400)
Q Consensus 202 ~ 202 (400)
+
T Consensus 86 a 86 (301)
T 1xky_A 86 A 86 (301)
T ss_dssp E
T ss_pred e
Confidence 4
No 240
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=56.36 E-value=54 Score=26.58 Aligned_cols=58 Identities=17% Similarity=0.158 Sum_probs=38.7
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
..++..|++++.+ |.....+.+.+.+.... +.+|.++.-..+ +.+.+.++.+.+++.+
T Consensus 110 ~~l~~~G~~v~~L------G~~vp~~~l~~~~~~~~-~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 110 MMLESGGFTVYNL------GVDIEPGKFVEAVKKYQ-PDIVGMSALLTT-----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp HHHHHTTCEEEEC------CSSBCHHHHHHHHHHHC-CSEEEEECCSGG-----GTHHHHHHHHHHHHTT
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHHcC-CCEEEEeccccc-----cHHHHHHHHHHHHhcC
Confidence 4568889998877 23457888887776432 588887743221 3455888888887654
No 241
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=54.68 E-value=28 Score=30.36 Aligned_cols=71 Identities=11% Similarity=0.086 Sum_probs=46.2
Q ss_pred HHhcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
-...|+-+..+-|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 10 ~~~~Gv~~a~vTPF~~dg-~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 10 TNLRGVMAALLTPFDQQQ-ALDKASLRRLVQFNIQQGIDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp GGGCSEEEECCCCBCTTS-SBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCceEEeeEcCCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 344565433332666665 789999988876 11224677655 455556679999999999987753 567765
No 242
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=48.73 E-value=82 Score=29.87 Aligned_cols=110 Identities=16% Similarity=0.128 Sum_probs=61.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc---CC---------C-C-----EEEEeCCCc-------------cc------hhHH
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLC---DA---------G-D-----SVVMFAPYY-------------FN------SYMS 129 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~---~~---------g-d-----~vlv~~p~~-------------~~------~~~~ 129 (400)
++++.|.++.++..++...+..|. .. | . ..+...|.| .+ +.+.
T Consensus 128 v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~ 207 (525)
T 3gh5_A 128 TTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQIDL 207 (525)
T ss_dssp ECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHH
T ss_pred EeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHHHH
Confidence 456778888777777776666653 11 2 1 124455554 11 1123
Q ss_pred HHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 130 FQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 130 ~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+...+.++..+--.|+++|.+..+...++-.... . .......|-.++.+++++|.+.|+++||-||-
T Consensus 208 mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga--~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 208 ASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGS--K----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTT--S----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHcCCcEEEEEeccCCccccccccchhhhhccC--c----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3445555554413455666655444333322111 0 00112245678999999999999999998874
No 243
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=47.91 E-value=61 Score=27.70 Aligned_cols=76 Identities=9% Similarity=0.024 Sum_probs=42.1
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 89 ~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v 168 (400)
...+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.++++++.-..+..+
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~----d~~~v~~~~~~~~~iD~l 90 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVR-ELDLQ----DLSSVRRFADGVSGADVL 90 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEE-ECCTT----CHHHHHHHHHTCCCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEE-EcCCC----CHHHHHHHHHhcCCCCEE
Confidence 3445555544333345556677788888776544333334444456566666 55422 677777777643324555
Q ss_pred E
Q 015768 169 S 169 (400)
Q Consensus 169 ~ 169 (400)
+
T Consensus 91 v 91 (291)
T 3rd5_A 91 I 91 (291)
T ss_dssp E
T ss_pred E
Confidence 4
No 244
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=47.10 E-value=81 Score=23.04 Aligned_cols=80 Identities=10% Similarity=0.007 Sum_probs=52.4
Q ss_pred CCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 112 AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 112 ~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.+.-|+...|.+..+...+...|+ +++.+++.++. -.+..+|+.++.+. ...++.... -++....++
T Consensus 32 ~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~---d~lwa~EqaLrsg~--~~aVl~wl~-----~l~~~~~RR 101 (119)
T 1ofu_X 32 DARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNA---AALALSCEALRLGR--SHTVVSWLE-----PLSRAARKQ 101 (119)
T ss_dssp SSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHH---HHHHHHHHHHHHTC--EEEEEECCS-----SCCHHHHHH
T ss_pred cCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcH---HHHHHHHHHHhcCC--ccEEEECCC-----cCChHHHHH
Confidence 455677777878888888888886 56666332221 14677888888765 555555432 267777888
Q ss_pred HHHHHHHcCCEEE
Q 015768 189 ISDLCKAAGSWLV 201 (400)
Q Consensus 189 i~~l~~~~~~~li 201 (400)
+--.+++-+...+
T Consensus 102 LqlAA~~g~~~~~ 114 (119)
T 1ofu_X 102 LSRAAQLGQAQSL 114 (119)
T ss_dssp HHHHHHHHTCEEE
T ss_pred HHHHHHhCCCeEE
Confidence 8777777665543
No 245
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=46.87 E-value=73 Score=28.41 Aligned_cols=58 Identities=10% Similarity=0.086 Sum_probs=40.6
Q ss_pred CCcHHHHHHHHHHHHhhcCCCCCcEEE-eC--------ChHHHHHHHHHHhc---CCCCEEEEeCCCccc
Q 015768 68 EGLPELRDALVKKLNQENKLYKSSVMV-TA--------GANQAFVNIVLTLC---DAGDSVVMFAPYYFN 125 (400)
Q Consensus 68 ~g~~~~~~~~a~~l~~~~~~~~~~i~~-~~--------g~t~a~~~~~~~l~---~~gd~vlv~~p~~~~ 125 (400)
.+...=.+.++++|.+.+|.+.++|.+ +. -+...+..++..|. ++||.+++.=-+|..
T Consensus 71 ~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYFSGHG~ 140 (350)
T 4f6o_A 71 RGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGG 140 (350)
T ss_dssp SSHHHHHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEEESCEE
T ss_pred CCHHHHHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCCce
Confidence 455566678888888888888777754 43 24566777777664 589999887767644
No 246
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=46.14 E-value=1e+02 Score=26.33 Aligned_cols=98 Identities=13% Similarity=0.068 Sum_probs=53.3
Q ss_pred CcEEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCC
Q 015768 90 SSVMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (400)
Q Consensus 90 ~~i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~ 164 (400)
+.+++.+|++.+|- .+...|.+.|-+|++..-.-.......+..|.+...+ ..|-. |.++++++++ ...+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGI-QADSA----NLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEE-ECCTT----CHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEE-EecCC----CHHHHHHHHHHHHHHcCC
Confidence 44555555556664 4455677889888877654434445556667666666 54422 5556665554 2222
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHHH
Q 015768 165 PKLVSVVNPGNPSGT--YIPERLLKRISDL 192 (400)
Q Consensus 165 ~~~v~l~~p~nptG~--~~~~~~l~~i~~l 192 (400)
+..++-....++.+- -.+.++++++.++
T Consensus 104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp EEEEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 344432222333332 2467777777763
No 247
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=45.19 E-value=60 Score=28.28 Aligned_cols=69 Identities=9% Similarity=0.006 Sum_probs=46.0
Q ss_pred hcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 132 MTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 132 ~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
..|+-+..+-|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 16 ~~Gv~~a~vTPf~~dg-~iD~~~l~~lv~~li~~Gv~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 16 LGTLLTAMVTPFSGDG-SLDTATAARLANHLVDQGCDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp HCSEEEECCCCBCTTS-CBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCceEEEEECCCCCCC-CcCHHHHHHHHHHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4565443333666665 789999998876 11234666654 455556778999999999987764 567776
No 248
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=44.87 E-value=1.4e+02 Score=25.25 Aligned_cols=97 Identities=18% Similarity=0.103 Sum_probs=49.2
Q ss_pred CCcEEEeCChHHHH-HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCC
Q 015768 89 KSSVMVTAGANQAF-VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKP 163 (400)
Q Consensus 89 ~~~i~~~~g~t~a~-~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~ 163 (400)
...+++|.++ .++ ..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.++++++ ...
T Consensus 27 ~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 27 QRVCIVTGGG-SGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGV-RVDVS----SAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEE-ECCTT----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEE-EecCC----CHHHHHHHHHHHHHHcC
Confidence 3445555444 444 44556677788888776544333334444455555555 44422 5566665554 112
Q ss_pred CCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 164 TPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
.+..++-+......+. -.+.+++++..+
T Consensus 101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2455554433222232 246666665554
No 249
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=44.25 E-value=1.4e+02 Score=24.89 Aligned_cols=100 Identities=13% Similarity=0.143 Sum_probs=58.0
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEE-E--eCC------Cc-----cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHH
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDSVV-M--FAP------YY-----FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLE 156 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~vl-v--~~p------~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~ 156 (400)
-+++.|||..+...+..+.. .|..|. + .-+ .| ......++.+|+....+ +..... .-..+++.
T Consensus 7 vvvl~SGGkDSs~al~~l~~-~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v-~~~g~~-~~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAIK-NRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKG-FTQGEK-EKEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHHH-TTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEE-EC-------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHHH-cCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEE-ECCCCc-hHHHHHHH
Confidence 46778999888877776654 454442 2 111 11 12334567788876666 544221 12467777
Q ss_pred HhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 157 KTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 157 ~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
+.++.- .+.+++ +|.+.+.....++-+.|.+.|+..+
T Consensus 84 ~~l~~~-~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 84 RVLSGL-KIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHTTS-CCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHhc-CCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 777643 245565 6777777778888889999887765
No 250
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=44.23 E-value=73 Score=28.52 Aligned_cols=73 Identities=8% Similarity=-0.034 Sum_probs=48.0
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
+-++..|+-+..+-|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 56 ~~~~~~Gi~~alvTPF~~dg-~ID~~al~~lv~~li~~Gv~Gl~v~-GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 56 DDIKALRVITAIKTPYLPDG-RFDLEAYDDLVNIQIQNGAEGVIVG-GTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp HHHHTCCEEEECCCCBCTTS-SBCHHHHHHHHHHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred hhcccCCeEEEEeCcCCCCC-CcCHHHHHHHHHHHHHcCCCEEEec-ccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 34556665443333666665 789999998876 12234777665 455555778999999999877653 467765
No 251
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=43.94 E-value=1.4e+02 Score=25.01 Aligned_cols=100 Identities=11% Similarity=0.007 Sum_probs=53.1
Q ss_pred CCCCCcEEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-
Q 015768 86 KLYKSSVMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE- 160 (400)
Q Consensus 86 ~~~~~~i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~- 160 (400)
+++. .+++.+|++.+|- .+...|.+.|.+|++.+-.-.... ..++..|.++..+ ..|-. +.+++++.++
T Consensus 6 ~L~g-KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~-~~Dv~----~~~~v~~~~~~ 79 (255)
T 4g81_D 6 DLTG-KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGV-AFDVT----DELAIEAAFSK 79 (255)
T ss_dssp CCTT-CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEEC-CCCTT----CHHHHHHHHHH
T ss_pred CCCC-CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE-EeeCC----CHHHHHHHHHH
Confidence 4443 4455555555554 445567788988888754332222 3345567777766 55422 5566665554
Q ss_pred ---cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 161 ---TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 161 ---~~~~~~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
...++..++-....++.+- -.+.++++++.+
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~ 115 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVID 115 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3333455542222233332 257777777665
No 252
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=43.68 E-value=50 Score=28.84 Aligned_cols=59 Identities=15% Similarity=0.117 Sum_probs=40.6
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 25 Pf~~dg-~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 25 PFTATA-EVDYGKLEENLHKLGTFPFRGFVVQ-GSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHTTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred cCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 566565 789999988876 22235667655 344445678999999999988764 466665
No 253
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=42.42 E-value=1.4e+02 Score=24.54 Aligned_cols=96 Identities=13% Similarity=0.076 Sum_probs=49.4
Q ss_pred CcEEEeCChHHHH-HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCC
Q 015768 90 SSVMVTAGANQAF-VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (400)
Q Consensus 90 ~~i~~~~g~t~a~-~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~ 164 (400)
..+++|.+ +.++ ..+.+.|.+.|.+|++....-.......+..+.++..+ ..|-. |.+.+++.++ ....
T Consensus 7 k~vlVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 7 KTALVTGA-AQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI-AADIS----DPGSVKALFAEIQALTGG 80 (247)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEC-CCCTT----CHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEE-EcCCC----CHHHHHHHHHHHHHHCCC
Confidence 34455544 4444 45555677788888877654433444444456666655 54422 5566666554 1122
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 165 PKLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 165 ~~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
+..++-+....+.+. -.+.+++++..+
T Consensus 81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 81 IDILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 455554433223222 246566665554
No 254
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=41.93 E-value=44 Score=29.00 Aligned_cols=59 Identities=5% Similarity=-0.002 Sum_probs=40.8
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 18 Pf~~dg-~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 18 PMNQDG-SIHYEQLRDLIDWHIENGTDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCC-CcCHHHHHHHHHHHHHcCCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 566665 7899999888761 2224666654 455556778999999999987653 466665
No 255
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=40.63 E-value=76 Score=27.58 Aligned_cols=68 Identities=7% Similarity=-0.021 Sum_probs=43.9
Q ss_pred cCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 133 TGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 133 ~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
.|+-+..+-|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++++|+
T Consensus 18 ~Gv~~a~vTPf~~dg-~iD~~~l~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 18 GTVGVAMVTPFTESG-DIDIAAGREVAAYLVDKGLDSLVLA-GTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp CSEEEECCCCBCTTS-CBCHHHHHHHHHHHHHTTCCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CceEEeeeccCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 454433332566555 789999988876 11224676655 445455678999999999987753 466664
No 256
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=40.63 E-value=88 Score=24.17 Aligned_cols=58 Identities=12% Similarity=0.166 Sum_probs=38.3
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
..++..|++++.. |...+++++.+.+.... +.+|.++.... ...+.+.++.+.+++.+
T Consensus 40 ~~l~~~G~eVi~l------G~~~p~e~lv~aa~~~~-~diV~lS~~~~-----~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 40 RALRDAGFEVVYT------GLRQTPEQVAMAAVQED-VDVIGVSILNG-----AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp HHHHHTTCEEECC------CSBCCHHHHHHHHHHTT-CSEEEEEESSS-----CHHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHhcC-CCEEEEEeech-----hhHHHHHHHHHHHHhcC
Confidence 4568889998866 22357888877776443 58888774332 23456788888777653
No 257
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=40.25 E-value=1e+02 Score=25.38 Aligned_cols=77 Identities=9% Similarity=0.045 Sum_probs=39.7
Q ss_pred CcEEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEE
Q 015768 90 SSVMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLV 168 (400)
Q Consensus 90 ~~i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v 168 (400)
+..++.+|++.++- .+...|.+.|.+|++..-.-.......+..+..+..+ ..|- -+.+.+++.++....+.++
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~----~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE-VCNL----ANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEE-ECCT----TSHHHHHHHHHTCSCCSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEE-EcCC----CCHHHHHHHHHhcCCCCEE
Confidence 34444444445544 4455677788888776544333333333333333333 3332 2567777777644335665
Q ss_pred EEe
Q 015768 169 SVV 171 (400)
Q Consensus 169 ~l~ 171 (400)
+-.
T Consensus 89 i~~ 91 (249)
T 3f9i_A 89 VCN 91 (249)
T ss_dssp EEC
T ss_pred EEC
Confidence 533
No 258
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=39.96 E-value=88 Score=27.67 Aligned_cols=78 Identities=17% Similarity=0.238 Sum_probs=46.7
Q ss_pred eCCCccchhHHHHhc-CcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 119 FAPYYFNSYMSFQMT-GVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 119 ~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
.-|+|.+..++.... ++++..+ -+.+. .-.+.+.+.+.... .+++++.... ++.+..+++.++++++|
T Consensus 63 Gvpvy~sv~ea~~~~p~~DlaVi-~vp~~---~a~~ai~ea~~~~G-v~~vViiT~G------~~e~~~~~l~~~a~~~g 131 (334)
T 3mwd_B 63 LIPVFKNMADAMRKHPEVDVLIN-FASLR---SAYDSTMETMNYAQ-IRTIAIIAEG------IPEALTRKLIKKADQKG 131 (334)
T ss_dssp EEEEESSHHHHHHHCTTCCEEEE-CCCTT---THHHHHHHHTTSTT-CCEEEECCSC------CCHHHHHHHHHHHHHHT
T ss_pred CceeeCCHHHHhhcCCCCcEEEE-ecCHH---HHHHHHHHHHHHCC-CCEEEEECCC------CCHHHHHHHHHHHHHcC
Confidence 357888888877654 3554444 23222 12456666665222 4666654322 23466889999999999
Q ss_pred CEEEEccccc
Q 015768 198 SWLVVDNTYE 207 (400)
Q Consensus 198 ~~li~D~a~~ 207 (400)
+.++==++.+
T Consensus 132 ~rliGPNc~G 141 (334)
T 3mwd_B 132 VTIIGPATVG 141 (334)
T ss_dssp CEEECSSCCC
T ss_pred CEEEccCCcc
Confidence 9988555544
No 259
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=39.94 E-value=56 Score=28.80 Aligned_cols=72 Identities=14% Similarity=0.147 Sum_probs=43.1
Q ss_pred cCCCCEEEEeCCCccc-------h---hHHHHhcCcEEEEeccCCC--CCC-C-C---CHHHHHHhhccCCCCeEEEEeC
Q 015768 110 CDAGDSVVMFAPYYFN-------S---YMSFQMTGVTHILVGPCSS--KTL-H-P---DADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~-------~---~~~~~~~g~~~~~~~~~~~--~~~-~-~---~~e~l~~~l~~~~~~~~v~l~~ 172 (400)
+++||+|-+..|+... + ...++..|.+++.- +.-. +++ . - .+++|.+++. ++.+++|+...
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~-Dp~i~aI~~~r 86 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFG-EHVAEMDCMMSSSIRSRVADIHEAFN-DSSVKAILTVI 86 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEEC-TTTTCCCTTSSCCHHHHHHHHHHHHH-CTTEEEEEESC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEEC-cchhhccCcccCCHHHHHHHHHHHhh-CCCCCEEEEcC
Confidence 5789999999998532 1 13457789998876 4321 221 1 1 2355555555 34478988665
Q ss_pred CCCCCccCCCH
Q 015768 173 PGNPSGTYIPE 183 (400)
Q Consensus 173 p~nptG~~~~~ 183 (400)
...-+-.++|.
T Consensus 87 GG~g~~rlL~~ 97 (327)
T 4h1h_A 87 GGFNSNQLLPY 97 (327)
T ss_dssp CCSCGGGGGGG
T ss_pred CchhHHHHhhh
Confidence 55545555553
No 260
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=39.49 E-value=54 Score=28.71 Aligned_cols=70 Identities=6% Similarity=0.022 Sum_probs=44.0
Q ss_pred HhcCcEEEEeccCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 131 ~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
+..|+-+..+-|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 7 ~~~Gv~~a~vTPf~~dg-~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 7 KECKIITAFITPFHEDG-SINFDAIPALIEHLLAHHTDGILLA-GTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp TTCCEEEECCCCBCTTS-SBCTTHHHHHHHHHHHTTCCCEEES-STTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred ccCceEEeeecCCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 34565433332666665 6898888887761 1224566554 445556678999999999988764 456665
No 261
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=39.14 E-value=60 Score=19.20 Aligned_cols=29 Identities=24% Similarity=0.253 Sum_probs=24.2
Q ss_pred eEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 359 HLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 359 ~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
.+|+++..-+..+.+.....|-+++.++-
T Consensus 3 rvrisitartkkeaekfaailikvfaelg 31 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAELG 31 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHhC
Confidence 47999877688899999999999988763
No 262
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=38.85 E-value=1.4e+02 Score=23.24 Aligned_cols=79 Identities=10% Similarity=-0.000 Sum_probs=51.7
Q ss_pred CCCEEEEeCCCccchhHHHHhcCc---EEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 112 AGDSVVMFAPYYFNSYMSFQMTGV---THILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 112 ~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
.+.-|+...|-+..+...+...|+ +++.+++.++. -.+...|+.++... ...++.... -++....++
T Consensus 74 ~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~---daLwa~EqALrsG~--~~aVl~Wl~-----~l~~~~~RR 143 (161)
T 1oft_A 74 DARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNA---AALALSCEALRLGR--SHTVVSWLE-----PLSRAARKQ 143 (161)
T ss_dssp SSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTT---HHHHHHHHHHHTTC--EEEEEECCS-----SCCHHHHHH
T ss_pred cCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChH---HHHHHHHHHHhcCC--ccEEEECCC-----cCChHHHHH
Confidence 445676667777788888888996 46666333322 14678888888765 555555433 267777888
Q ss_pred HHHHHHHcCCEE
Q 015768 189 ISDLCKAAGSWL 200 (400)
Q Consensus 189 i~~l~~~~~~~l 200 (400)
+--.+++-+...
T Consensus 144 LqlAAe~g~~~~ 155 (161)
T 1oft_A 144 LSRAAQLGQAQS 155 (161)
T ss_dssp HHHHHHHTTCEE
T ss_pred HHHHHHhCCCeE
Confidence 777777655543
No 263
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=38.84 E-value=72 Score=27.49 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=46.3
Q ss_pred CCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015768 121 PYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (400)
Q Consensus 121 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (400)
|+|.++.+..+...++++.+ -..+. ...+.++++++.+. +++++... | ++.++.+++.+.++++++.+
T Consensus 51 ~vy~sl~el~~~~~~D~viI-~tP~~---~~~~~~~ea~~~Gi--~~iVi~t~----G--~~~~~~~~l~~~A~~~gv~l 118 (288)
T 2nu8_A 51 PVFNTVREAVAATGATASVI-YVPAP---FCKDSILEAIDAGI--KLIITITE----G--IPTLDMLTVKVKLDEAGVRM 118 (288)
T ss_dssp EEESSHHHHHHHHCCCEEEE-CCCGG---GHHHHHHHHHHTTC--SEEEECCC----C--CCHHHHHHHHHHHHHHTCEE
T ss_pred eccCCHHHHhhcCCCCEEEE-ecCHH---HHHHHHHHHHHCCC--CEEEEECC----C--CCHHHHHHHHHHHHHcCCEE
Confidence 45666666666435555544 33222 24667777777554 65443222 3 25667889999999999988
Q ss_pred EEccccc
Q 015768 201 VVDNTYE 207 (400)
Q Consensus 201 i~D~a~~ 207 (400)
+-..+.+
T Consensus 119 iGPNc~G 125 (288)
T 2nu8_A 119 IGPNTPG 125 (288)
T ss_dssp ECSSCCE
T ss_pred EecCCcc
Confidence 8666544
No 264
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=38.14 E-value=39 Score=27.45 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=27.6
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|.+|+..-..|+.|.... +.++.+++++||+.++.
T Consensus 160 Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 160 PAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred ceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 577776655588999999 77777788899998875
No 265
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.98 E-value=46 Score=29.16 Aligned_cols=59 Identities=8% Similarity=0.017 Sum_probs=41.2
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc--CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA--GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~--~~~li~ 202 (400)
|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 19 Pf~~dg-~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 19 PFHDDG-KIDDVSIDRLTDFYAEVGCEGVTVL-GILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHTTCSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHCCCCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 566665 789999998876 11224677654 344445678999999999988765 577776
No 266
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=37.39 E-value=1.7e+02 Score=24.09 Aligned_cols=65 Identities=11% Similarity=0.050 Sum_probs=28.9
Q ss_pred CcEEEeCChHHHH-HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 90 SSVMVTAGANQAF-VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 90 ~~i~~~~g~t~a~-~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
..+++|.++ .++ ..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++
T Consensus 8 k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~ 73 (257)
T 3tpc_A 8 RVFIVTGAS-SGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFR-NADVT----NEADATAALA 73 (257)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSCC------------CEEE-ECCTT----CHHHHHHHHH
T ss_pred CEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEE-EccCC----CHHHHHHHHH
Confidence 344555444 444 44555677788888776544433334444445455555 44322 5556665554
No 267
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=36.36 E-value=98 Score=27.85 Aligned_cols=72 Identities=15% Similarity=0.141 Sum_probs=43.6
Q ss_pred cCCCCEEEEeCCCccch----------hHHHHhcCcEEEEeccCCCC--CC--CCC---HHHHHHhhccCCCCeEEEEeC
Q 015768 110 CDAGDSVVMFAPYYFNS----------YMSFQMTGVTHILVGPCSSK--TL--HPD---ADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~----------~~~~~~~g~~~~~~~~~~~~--~~--~~~---~e~l~~~l~~~~~~~~v~l~~ 172 (400)
+++||+|-+.+|+.... ...++..|.+++.- +.-.. ++ .-+ +++|.+++. ++.+++|+...
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~af~-Dp~i~aI~~~r 117 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSG-KLTGKTDFYRSGTIKERAQEFNELVY-NPDITCIMSTI 117 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHT-CTTEEEEEESC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEC-CchhcccCccCCCHHHHHHHHHHHhh-CCCCCEEEEcc
Confidence 47899999999986431 13456789998876 54222 21 112 455555555 34478888765
Q ss_pred CCCCCccCCCH
Q 015768 173 PGNPSGTYIPE 183 (400)
Q Consensus 173 p~nptG~~~~~ 183 (400)
...-+-.+++.
T Consensus 118 GGyga~rlLp~ 128 (371)
T 3tla_A 118 GGDNSNSLLPF 128 (371)
T ss_dssp CCSCGGGGGGG
T ss_pred ccccHHHHHhh
Confidence 55545555553
No 268
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=36.31 E-value=50 Score=28.40 Aligned_cols=79 Identities=11% Similarity=-0.035 Sum_probs=45.1
Q ss_pred CEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015768 114 DSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (400)
Q Consensus 114 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~ 191 (400)
.+.++. +|+.+.-.++..|++.+.+ ..-..+..++...+.++++ ....+++|+..... +..-.+.|.+
T Consensus 163 ~~~~vt--~H~af~Y~~~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~-------~~~~~~~l~~ 232 (282)
T 3mfq_A 163 SRYLVT--PHDAFNYFAASYDFTLYAP-QGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTT-------NPERMKKLQE 232 (282)
T ss_dssp GCEEEC--SSSCCHHHHHHTTCEEECS-SCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTS-------CTHHHHHHHH
T ss_pred CcEEEE--ECchHHHHHHHCCCeEecc-cccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-------ChHHHHHHHH
Confidence 454443 2334455678899987755 2211223456666666554 22236888755322 3344777888
Q ss_pred HHHHcCCEEEE
Q 015768 192 LCKAAGSWLVV 202 (400)
Q Consensus 192 l~~~~~~~li~ 202 (400)
++++.|+.+.+
T Consensus 233 ~a~~~g~~v~~ 243 (282)
T 3mfq_A 233 AVKAKGGQVEV 243 (282)
T ss_dssp HHHTTSCCCEE
T ss_pred HHHhcCCceEE
Confidence 88888876543
No 269
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=35.76 E-value=96 Score=26.83 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=46.7
Q ss_pred eCCCccchhHHHHhcC-cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcC
Q 015768 119 FAPYYFNSYMSFQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 119 ~~p~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
..|+|.+..++.+..+ ++++.+ -..+. ...+.++++++.+. +.+++.. +| ++.++.+++.+.+++++
T Consensus 55 G~~vy~sl~el~~~~~~~DvaIi-~vp~~---~~~~~v~ea~~~Gi--~~vVi~t----~G--~~~~~~~~l~~~A~~~g 122 (297)
T 2yv2_A 55 GVPVYDSVKEALAEHPEINTSIV-FVPAP---FAPDAVYEAVDAGI--RLVVVIT----EG--IPVHDTMRFVNYARQKG 122 (297)
T ss_dssp TEEEESSHHHHHHHCTTCCEEEE-CCCGG---GHHHHHHHHHHTTC--SEEEECC----CC--CCHHHHHHHHHHHHHHT
T ss_pred CEeeeCCHHHHhhcCCCCCEEEE-ecCHH---HHHHHHHHHHHCCC--CEEEEEC----CC--CCHHHHHHHHHHHHHcC
Confidence 3455666666665333 554444 22222 24667777776554 6444432 23 25567889999999999
Q ss_pred CEEEEcccccc
Q 015768 198 SWLVVDNTYEY 208 (400)
Q Consensus 198 ~~li~D~a~~~ 208 (400)
+.++-..+.+.
T Consensus 123 i~viGPNc~Gi 133 (297)
T 2yv2_A 123 ATIIGPNCPGA 133 (297)
T ss_dssp CEEECSSSCEE
T ss_pred CEEEcCCCCee
Confidence 98887776553
No 270
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=35.39 E-value=1.7e+02 Score=24.17 Aligned_cols=97 Identities=13% Similarity=0.026 Sum_probs=47.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCC
Q 015768 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~ 165 (400)
..+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....+
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHAL-RSDIA----DLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEE-ECCTT----CHHHHHHHHHHHHHHHSSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEE-EccCC----CHHHHHHHHHHHHHHhCCC
Confidence 445555544333345556677788888776544333334444445555555 44422 5555555543 11223
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 166 KLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 166 ~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
..++-+....+.+. -.+.+++++..+
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 54443322222222 236666666554
No 271
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=35.36 E-value=31 Score=32.19 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHHHcCCEEEEccccccccc
Q 015768 180 YIPERLLKRISDLCKAAGSWLVVDNTYEYFMY 211 (400)
Q Consensus 180 ~~~~~~l~~i~~l~~~~~~~li~D~a~~~~~~ 211 (400)
.-+.++++++++.|+++|+.||.|-|+-+...
T Consensus 73 ~Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~~ 104 (496)
T 4gqr_A 73 SGNEDEFRNMVTRCNNVGVRIYVDAVINHMCG 104 (496)
T ss_dssp TBCHHHHHHHHHHHHHTTCEEEEEECCSEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEccCcCCC
Confidence 34678899999999999999999999876543
No 272
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=35.27 E-value=51 Score=28.50 Aligned_cols=59 Identities=12% Similarity=0.022 Sum_probs=39.7
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 12 Pf~~dg-~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 12 PMLKDG-GVDWKSLEKLVEWHIEQGTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHCCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 566565 7899988888761 1224666554 455556778999999999887653 466665
No 273
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=35.03 E-value=1.1e+02 Score=27.08 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=38.4
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+..-.++++.+ ..... ...+...++++.+ |-|++.-| ...+.++.++|.++|+++|+.+.+
T Consensus 56 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khV~~EKP-----la~~~~e~~~l~~~a~~~g~~~~v 123 (352)
T 3kux_A 56 VSDPQMLFNDPSIDLIVI-PTPND---THFPLAQSALAAG---KHVVVDKP-----FTVTLSQANALKEHADDAGLLLSV 123 (352)
T ss_dssp ESCHHHHHHCSSCCEEEE-CSCTT---THHHHHHHHHHTT---CEEEECSS-----CCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred ECCHHHHhcCCCCCEEEE-eCChH---HHHHHHHHHHHCC---CcEEEECC-----CcCCHHHHHHHHHHHHHcCCeEEE
Confidence 445556665555666665 33222 2345555555543 45555443 224566677777777777777666
Q ss_pred c
Q 015768 203 D 203 (400)
Q Consensus 203 D 203 (400)
-
T Consensus 124 ~ 124 (352)
T 3kux_A 124 F 124 (352)
T ss_dssp C
T ss_pred E
Confidence 3
No 274
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=34.40 E-value=61 Score=28.66 Aligned_cols=59 Identities=10% Similarity=0.128 Sum_probs=39.0
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++++|+
T Consensus 45 PF~~dg-~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 45 PADEAG-RVDIEAFSALIARLDAAEVDSVGIL-GSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp CBCTTC-CBCHHHHHHHHHHHHHHTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 555555 7899888887761 1124666654 444455678999999998887653 466665
No 275
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=34.32 E-value=40 Score=29.52 Aligned_cols=59 Identities=5% Similarity=-0.004 Sum_probs=40.1
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 19 Pf~~dg-~iD~~~l~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 19 TFADTG-DLDLASQKRAVDFMIDAGSDGLCIL-ANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTTCSCEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 566565 7899999988761 1224666654 344455678999999999988764 455654
No 276
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=34.32 E-value=2.1e+02 Score=24.01 Aligned_cols=65 Identities=17% Similarity=0.092 Sum_probs=34.5
Q ss_pred CcEEEeCChHHHH-HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 90 SSVMVTAGANQAF-VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 90 ~~i~~~~g~t~a~-~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
..+++|. ++.++ ..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. +.+.+++.++
T Consensus 31 k~vlVTG-as~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~----~~~~v~~~~~ 96 (281)
T 3ppi_A 31 ASAIVSG-GAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFV-STNVT----SEDSVLAAIE 96 (281)
T ss_dssp EEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTT----CHHHHHHHHH
T ss_pred CEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEE-EcCCC----CHHHHHHHHH
Confidence 3445554 44444 44555677788888776544333334444455555555 44422 5555555544
No 277
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=34.30 E-value=49 Score=29.05 Aligned_cols=59 Identities=20% Similarity=0.152 Sum_probs=40.7
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 33 Pf~~dg-~iD~~~l~~li~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 33 PFDDNG-AIDEKAFCNFVEWQITQGINGVSPV-GTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHTTCSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEeC-ccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 566555 789999998876 12224676644 455556778999999999987764 456665
No 278
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=34.30 E-value=2.3e+02 Score=24.53 Aligned_cols=101 Identities=13% Similarity=0.026 Sum_probs=49.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHh-------cCcEEEEeccCCCCCCCCCHHHHHH
Q 015768 88 YKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQM-------TGVTHILVGPCSSKTLHPDADWLEK 157 (400)
Q Consensus 88 ~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~-------~g~~~~~~~~~~~~~~~~~~e~l~~ 157 (400)
....|++|.++...=..++..|.+.|.+|.+..-.-.... ..+.. .+++++.. .+ .|.+.+++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl------~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG-DI------RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEEC-CT------TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEc-cC------CCHHHHHH
Confidence 3456777765433334555566667777765543222222 22222 35555544 22 26778888
Q ss_pred hhccCCCCeEEEEeCC-CCCCccCCCHH--------HHHHHHHHHHHcCC
Q 015768 158 TLETKPTPKLVSVVNP-GNPSGTYIPER--------LLKRISDLCKAAGS 198 (400)
Q Consensus 158 ~l~~~~~~~~v~l~~p-~nptG~~~~~~--------~l~~i~~l~~~~~~ 198 (400)
++.. +.+|+-+.. .++....-+.+ -...+++.|++.++
T Consensus 97 ~~~~---~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 97 VMKG---VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp HTTT---CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred HhcC---CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8762 355554422 11111111111 13457778887765
No 279
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=34.20 E-value=57 Score=28.21 Aligned_cols=59 Identities=12% Similarity=0.034 Sum_probs=39.6
Q ss_pred cCCCCCCCCCHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++ ...+...++++ .++--+..++.+|..++.+.+.+. ++++|+
T Consensus 14 Pf~~dg-~iD~~~l~~lv~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 14 SFNEDG-TINEKGLRQIIRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 555554 789998888876 31235677654 344445678999999999887753 466664
No 280
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=34.16 E-value=93 Score=27.47 Aligned_cols=71 Identities=14% Similarity=0.154 Sum_probs=43.1
Q ss_pred cCCCCEEEEeCCCccch---h-------HHHHhcCcEEEEeccCCC--CCC--CCC---HHHHHHhhccCCCCeEEEEeC
Q 015768 110 CDAGDSVVMFAPYYFNS---Y-------MSFQMTGVTHILVGPCSS--KTL--HPD---ADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~---~-------~~~~~~g~~~~~~~~~~~--~~~--~~~---~e~l~~~l~~~~~~~~v~l~~ 172 (400)
+++||+|-+..|+.... . ..++..|.+++.- +.-. +++ .-+ +++|.+++.. +.+++|+...
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~ag~d~~Ra~dL~~a~~D-p~i~aI~~~r 86 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFS-THAEEIDRFASSSISSRVQDLHEAFRD-PNVKAILTTL 86 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEEC-TTTTCCCTTSSCCHHHHHHHHHHHHHC-TTEEEEEESC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEC-CchhcccCccCCCHHHHHHHHHHHhhC-CCCCEEEEcc
Confidence 57899999999987543 1 2456789998876 5322 121 112 3555555543 4478888765
Q ss_pred CCCCCccCCC
Q 015768 173 PGNPSGTYIP 182 (400)
Q Consensus 173 p~nptG~~~~ 182 (400)
...-+-.+++
T Consensus 87 GG~g~~rlL~ 96 (331)
T 4e5s_A 87 GGYNSNGLLK 96 (331)
T ss_dssp CCSCGGGGGG
T ss_pred ccccHHHHHh
Confidence 5544555554
No 281
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=33.69 E-value=56 Score=28.25 Aligned_cols=59 Identities=8% Similarity=0.012 Sum_probs=39.5
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 12 Pf~~dg-~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (292)
T 2ojp_A 12 PMDEKG-NVCRASLKKLIDYHVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADGRIPVIA 75 (292)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 555555 7899999888761 1124666654 455556678999999999987653 456653
No 282
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=33.59 E-value=2.2e+02 Score=24.09 Aligned_cols=137 Identities=18% Similarity=0.136 Sum_probs=70.4
Q ss_pred CcHHHHHHHHHhhcCCC-----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCC------hHH----HHHHHHHH
Q 015768 44 PPKMAMEKVKELVWDPS-----ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG------ANQ----AFVNIVLT 108 (400)
Q Consensus 44 ~~~~v~~a~~~~~~~~~-----~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g------~t~----a~~~~~~~ 108 (400)
...++.+.+..+++.+. ...|+ . ++.+.+.+++. +.+.+++++++= +.. +++..+..
T Consensus 29 ~~~~~~~~l~~Al~~G~~~~DTA~~Yg----~---E~~lG~al~~~-~~~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~r 100 (276)
T 3f7j_A 29 NGNEATESVKAAIKNGYRSIDTAAIYK----N---EEGVGIGIKES-GVAREELFITSKVWNEDQGYETTLAAFEKSLER 100 (276)
T ss_dssp TTHHHHHHHHHHHHTTCCEEECCGGGS----C---HHHHHHHHHHH-CSCGGGCEEEEEECGGGCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEECcCccc----C---HHHHHHHHhhc-CCCcccEEEEEeeCCCCCCHHHHHHHHHHHHHH
Confidence 34677788888887653 12343 2 34455555432 555677776532 122 23333333
Q ss_pred hcC-CCCEEEEeCCCccchhHH------HHhcC-cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccC
Q 015768 109 LCD-AGDSVVMFAPYYFNSYMS------FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTY 180 (400)
Q Consensus 109 l~~-~gd~vlv~~p~~~~~~~~------~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~ 180 (400)
|-. -=|-.++..|......+. ++..| ++.+-++ +.+.+.+++++.... .+.++.....||.-
T Consensus 101 Lg~dyiDl~~lH~p~~~~~~~~~~~l~~l~~~Gkir~iGvS-------n~~~~~l~~~~~~~~-~~~~~~Q~~~~~~~-- 170 (276)
T 3f7j_A 101 LQLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVS-------NFQVHHLEELLKDAE-IKPMVNQVEFHPRL-- 170 (276)
T ss_dssp HTCSCEEEEEESCCCSSSHHHHHHHHHHHHHTTSEEEEEEE-------SCCHHHHHHHHHHCS-SCCSEEEEECBTTB--
T ss_pred hCCCeeEEEEEecCCCCcHHHHHHHHHHHHHcCCccEEEec-------cCCHHHHHHHHHhcC-CCceeeeeeecccc--
Confidence 321 125677777765432222 23345 3444441 346778888776322 22222222233321
Q ss_pred CCHHHHHHHHHHHHHcCCEEEE
Q 015768 181 IPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~ 202 (400)
. -.++.+.|+++|+.++.
T Consensus 171 -~---~~~l~~~~~~~gi~v~a 188 (276)
T 3f7j_A 171 -T---QKELRDYCKGQGIQLEA 188 (276)
T ss_dssp -C---CHHHHHHHHHHTCEEEE
T ss_pred -C---CHHHHHHHHHCCCEEEE
Confidence 2 15788899999998875
No 283
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=33.55 E-value=2e+02 Score=23.72 Aligned_cols=97 Identities=9% Similarity=0.008 Sum_probs=47.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCC
Q 015768 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~ 165 (400)
..+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAV-QMDVT----RQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTT----CHHHHHHHHHHHHHHSSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEE-EeeCC----CHHHHHHHHHHHHHHcCCC
Confidence 445555544333345556677788888776544333334444445444444 44322 5555655554 22224
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 166 KLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 166 ~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
..++-+....+.+. -.+.+++++..+
T Consensus 84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 84 DILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 66554432222222 235566655443
No 284
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=33.14 E-value=66 Score=27.83 Aligned_cols=77 Identities=12% Similarity=0.117 Sum_probs=46.1
Q ss_pred CCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (400)
Q Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (400)
.|+|.+..++.+...++++.+ -..+. ...+.++++++.+. +.+++.. +|. +.++.+++.+.++++++.
T Consensus 56 ~~vy~sl~el~~~~~~Dv~ii-~vp~~---~~~~~v~ea~~~Gi--~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~ 123 (294)
T 2yv1_A 56 VPVFDTVKEAVKETDANASVI-FVPAP---FAKDAVFEAIDAGI--ELIVVIT----EHI--PVHDTMEFVNYAEDVGVK 123 (294)
T ss_dssp EEEESSHHHHHHHHCCCEEEE-CCCHH---HHHHHHHHHHHTTC--SEEEECC----SCC--CHHHHHHHHHHHHHHTCE
T ss_pred EeeeCCHHHHhhcCCCCEEEE-ccCHH---HHHHHHHHHHHCCC--CEEEEEC----CCC--CHHHHHHHHHHHHHcCCE
Confidence 345666666665335554444 22222 13566666666554 6544422 232 556788999999999998
Q ss_pred EEEcccccc
Q 015768 200 LVVDNTYEY 208 (400)
Q Consensus 200 li~D~a~~~ 208 (400)
++-..+.+.
T Consensus 124 viGPNc~Gi 132 (294)
T 2yv1_A 124 IIGPNTPGI 132 (294)
T ss_dssp EECSSCCEE
T ss_pred EEcCCCcee
Confidence 887776553
No 285
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=33.08 E-value=2.1e+02 Score=23.84 Aligned_cols=96 Identities=16% Similarity=0.066 Sum_probs=50.7
Q ss_pred CcEEEeCChHHHHHH-HHHHhcCCCCEEEEeCCCc-cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeE
Q 015768 90 SSVMVTAGANQAFVN-IVLTLCDAGDSVVMFAPYY-FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKL 167 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~-~~~~l~~~gd~vlv~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~ 167 (400)
..+++.+|++.+|-. +...|.+.|-+|++.+-.- ......++..|.+...+ ..|-. |.+.+++.++... +..
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~-~~Dv~----d~~~v~~~~~~g~-iDi 82 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASAL-LIDFA----DPLAAKDSFTDAG-FDI 82 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEE-ECCTT----STTTTTTSSTTTC-CCE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEE-EccCC----CHHHHHHHHHhCC-CCE
Confidence 345555565566654 4556778898877664322 22445566777776666 54422 3334444444332 444
Q ss_pred EEEeCC-CCCCcc--CCCHHHHHHHHHH
Q 015768 168 VSVVNP-GNPSGT--YIPERLLKRISDL 192 (400)
Q Consensus 168 v~l~~p-~nptG~--~~~~~~l~~i~~l 192 (400)
++ .|. -.+.+. -.+.++++++.++
T Consensus 83 LV-NNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 83 LV-NNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp EE-ECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EE-ECCCCCCCCCcccccHHHHHHHHHH
Confidence 43 332 222222 2577777777763
No 286
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=33.05 E-value=2.1e+02 Score=23.76 Aligned_cols=75 Identities=13% Similarity=0.149 Sum_probs=38.7
Q ss_pred CCcEEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCC
Q 015768 89 KSSVMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKP 163 (400)
Q Consensus 89 ~~~i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~ 163 (400)
...+++|.+ +.++- .+...|.+.|.+|++..-.-......++..++..+.. ++. +.+.+++.++ ...
T Consensus 27 ~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-Dv~------~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 27 SAPILITGA-SQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYG-DFS------CETGIMAFIDLLKTQTS 98 (260)
T ss_dssp CCCEEESST-TSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEEC-CTT------SHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEEC-CCC------CHHHHHHHHHHHHHhcC
Confidence 344555544 44444 4555677778777766544334445555566655444 222 4555555543 222
Q ss_pred CCeEEEEe
Q 015768 164 TPKLVSVV 171 (400)
Q Consensus 164 ~~~~v~l~ 171 (400)
.+..++-.
T Consensus 99 ~iD~lv~n 106 (260)
T 3gem_A 99 SLRAVVHN 106 (260)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 34555543
No 287
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=33.00 E-value=1.7e+02 Score=24.69 Aligned_cols=96 Identities=10% Similarity=-0.007 Sum_probs=47.8
Q ss_pred cEEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCC
Q 015768 91 SVMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (400)
Q Consensus 91 ~i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~ 165 (400)
.+++.+|++.++- .+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.+++.++ ....+
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAAC-RVDVS----DEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEE-ECCTT----CHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEE-EecCC----CHHHHHHHHHHHHHHcCCC
Confidence 3455555555554 4455667788888776544333334444445554445 44322 5556555544 11224
Q ss_pred eEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 166 KLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 166 ~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
..++-+....+.+. -.+.+++++..+
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 56554432222222 246666666554
No 288
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.87 E-value=1.7e+02 Score=24.54 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=46.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCcc---------------chhHHHHhcCcEEEEeccCCCCCCCCCHHH
Q 015768 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYF---------------NSYMSFQMTGVTHILVGPCSSKTLHPDADW 154 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~---------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~ 154 (400)
..+++|.++...=..+...|.+.|.+|++.+-... .....++..|.++..+ ..|-. +.+.
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~ 85 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTA-EVDVR----DRAA 85 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEE-ECCTT----CHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEE-EccCC----CHHH
Confidence 34455544433334555667778888776543310 0111233445565555 44422 5556
Q ss_pred HHHhhc----cCCCCeEEEEeCCCCCCccCCCHHHHHHHHH
Q 015768 155 LEKTLE----TKPTPKLVSVVNPGNPSGTYIPERLLKRISD 191 (400)
Q Consensus 155 l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~ 191 (400)
+++.+. ....+..++-+....+.+...+.+++++..+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 655544 1122455554433333333356666666554
No 289
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=32.84 E-value=2.4e+02 Score=24.38 Aligned_cols=136 Identities=19% Similarity=0.162 Sum_probs=70.4
Q ss_pred cHHHHHHHHHhhcCCC-----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCC------hHH----HHHHHHHHh
Q 015768 45 PKMAMEKVKELVWDPS-----ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG------ANQ----AFVNIVLTL 109 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~-----~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g------~t~----a~~~~~~~l 109 (400)
..++.+.+..+++.+. ...|+ . ++.+.+.+++ .+.+.+++++++= +.+ +++..+..|
T Consensus 64 ~~~~~~~l~~Al~~Gi~~~DTA~~Yg----~---E~~lG~al~~-~~~~R~~v~I~TK~~~~~~~~~~i~~~~e~SL~rL 135 (310)
T 3b3e_A 64 GNEATESVKAAIKNGYRSIDTAAIYK----N---EEGVGIGIKE-SGVAREELFITSKVWNEDQGYETTLAAFEKSLERL 135 (310)
T ss_dssp THHHHHHHHHHHHTTCCEEECCGGGS----C---HHHHHHHHHH-SSSCGGGCEEEEEECGGGCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEECCCccC----C---HHHHHHHHHh-cCCCcceEEEEEeCCCCCCCHHHHHHHHHHHHHHh
Confidence 4677788888887652 12343 2 3455666554 2556677776532 122 233333333
Q ss_pred c-CCCCEEEEeCCCccchhHH------HHhcC-cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 110 C-DAGDSVVMFAPYYFNSYMS------FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 110 ~-~~gd~vlv~~p~~~~~~~~------~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
- .-=|-.++..|......+. ++..| ++.+-++ +.+.+.+++++.... .+.++.....||.-
T Consensus 136 g~dyiDl~~lH~p~~~~~~e~~~al~~l~~~Gkir~iGvS-------n~~~~~l~~~~~~~~-~~p~~~Q~~~~~~~--- 204 (310)
T 3b3e_A 136 QLDYLDLYLIHWPGKDKYKDTWRALEKLYKDGKIRAIGVS-------NFQVHHLEELLKDAE-IKPMVNQVEFHPRL--- 204 (310)
T ss_dssp TCSCEEEEEESCCCSSCHHHHHHHHHHHHHTTSEEEEEEE-------SCCHHHHHHHHHHCS-SCCSEEEEECBTTB---
T ss_pred CCCeeEEEEeeCCCcccHHHHHHHHHHHHHcCCcceEeec-------CCCHHHHHHHHHhcC-CCcceeeeeccCcc---
Confidence 2 1125677777765432222 23445 3444441 346778888776322 22222232233321
Q ss_pred CHHHHHHHHHHHHHcCCEEEE
Q 015768 182 PERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~ 202 (400)
. -.++.+.|+++|+-++.
T Consensus 205 ~---~~~l~~~~~~~gi~v~a 222 (310)
T 3b3e_A 205 T---QKELRDYCKGQGIQLEA 222 (310)
T ss_dssp C---CHHHHHHHHHHTCEEEE
T ss_pred C---CHHHHHHHHHcCCEEEE
Confidence 2 15688899999998875
No 290
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=32.80 E-value=1.7e+02 Score=27.52 Aligned_cols=105 Identities=5% Similarity=0.041 Sum_probs=58.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc----CC--CCE-----EEEeCCCc-------------cc------hhHHHHhcCcE
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLC----DA--GDS-----VVMFAPYY-------------FN------SYMSFQMTGVT 136 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~----~~--gd~-----vlv~~p~~-------------~~------~~~~~~~~g~~ 136 (400)
++++.|.++.++..++...+..|. .. |.. .+...|.| .+ +.+.+...+.+
T Consensus 104 v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~KlN 183 (507)
T 1now_A 104 VKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFN 183 (507)
T ss_dssp ECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTTCC
T ss_pred EcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhCCc
Confidence 456678888777777777766653 11 111 23344444 11 11223445555
Q ss_pred EEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 137 ~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+..+-..|+++|.+..+...++-.... ..+ |-.++.+++++|.+.|+++||-||-
T Consensus 184 ~lh~HltDdq~wr~e~~~~P~Lt~~Ga----------~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 184 VLHWHIVDDQSFPYQSITFPELSNKGS----------YSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp EEEEECCCSSCCCBCCSSCHHHHHHHS----------SST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeeccCccceeeccchhhhhcccC----------cCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 554413455566544332222211100 012 5678999999999999999999884
No 291
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=32.76 E-value=1.5e+02 Score=21.79 Aligned_cols=37 Identities=14% Similarity=0.248 Sum_probs=26.5
Q ss_pred HHHHhcCeEEeCCCccCCCCeEEEEecc-CCHHHHHHHHH
Q 015768 339 WLAHRHGVVVIPGGACGCRGHLRISFGG-LVEDDCKAAAD 377 (400)
Q Consensus 339 ~l~~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~ 377 (400)
.|.+..| +.||..++...|+.+.+.. .+++++.++++
T Consensus 73 ~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~ 110 (125)
T 2kfp_A 73 SLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIE 110 (125)
T ss_dssp HHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHH
T ss_pred HHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHH
Confidence 3444566 5688878889999999875 67776665554
No 292
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=32.45 E-value=2.3e+02 Score=23.98 Aligned_cols=99 Identities=17% Similarity=0.146 Sum_probs=48.0
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCEEEEeCCC-cc---chhH---HHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC
Q 015768 91 SVMVTAGANQAFVNIVLTLCDAGDSVVMFAPY-YF---NSYM---SFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP 163 (400)
Q Consensus 91 ~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~-~~---~~~~---~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~ 163 (400)
.|++|.++...=..++..|.+.|..|.+..-. -. .-.. .+...|++++.. .. -|.+.+.++++.
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~-D~------~d~~~l~~~~~~-- 76 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA-SL------DDHQRLVDALKQ-- 76 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECC-CS------SCHHHHHHHHTT--
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeC-CC------CCHHHHHHHHhC--
Confidence 46666542222233444555556555543322 11 1111 123346665543 22 267888888864
Q ss_pred CCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcC-CEEEE
Q 015768 164 TPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAG-SWLVV 202 (400)
Q Consensus 164 ~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~-~~li~ 202 (400)
..+|+.+.. ..+...+.. ...+++.|++.+ +.-++
T Consensus 77 -~d~vi~~a~~~~~~~~~~~---~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 77 -VDVVISALAGGVLSHHILE---QLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp -CSEEEECCCCSSSSTTTTT---HHHHHHHHHHSCCCSEEE
T ss_pred -CCEEEECCccccchhhHHH---HHHHHHHHHhcCCCceEE
Confidence 345554432 222112233 577888888887 64333
No 293
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=32.41 E-value=1.9e+02 Score=23.81 Aligned_cols=96 Identities=15% Similarity=0.072 Sum_probs=44.6
Q ss_pred CcEEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCC
Q 015768 90 SSVMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPT 164 (400)
Q Consensus 90 ~~i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~ 164 (400)
..+++| |++.++- .+.+.|.+.|.+|++..-.-.......+..+.....+ ..|- -|.+.+++.++ ....
T Consensus 10 k~~lVT-Gas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv----~d~~~v~~~~~~~~~~~g~ 83 (248)
T 3op4_A 10 KVALVT-GASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM-ALNV----TNPESIEAVLKAITDEFGG 83 (248)
T ss_dssp CEEEES-SCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEE-ECCT----TCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEe-CCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEE-EEeC----CCHHHHHHHHHHHHHHcCC
Confidence 344555 4444443 4555677788888776544323333333333333334 3332 25556665554 1122
Q ss_pred CeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 165 PKLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 165 ~~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
+..++-+......+. -.+.+++++..+
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 84 VDILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 455553322222222 235566665544
No 294
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=32.07 E-value=62 Score=28.77 Aligned_cols=59 Identities=7% Similarity=-0.043 Sum_probs=38.9
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 42 PF~~dg-~ID~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 42 IFTADG-QLDKPGTAALIDDLIKAGVDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTTCSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 566555 789998888876 11224566544 445455678999999998887653 455553
No 295
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=31.91 E-value=29 Score=23.65 Aligned_cols=22 Identities=14% Similarity=0.025 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCEEEEccccc
Q 015768 186 LKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~ 207 (400)
-.+|.++++++|++++.|-.-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 6788888999999999997543
No 296
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=31.61 E-value=55 Score=28.28 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=36.8
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| +|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 13 Pf~~dg--iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~ 75 (291)
T 3a5f_A 13 PFTNTG--VDFDKLSELIEWHIKSKTDAIIVC-GTTGEATTMTETERKETIKFVIDKVNKRIPVIA 75 (291)
T ss_dssp CBCSSS--BCHHHHHHHHHHHHHTTCCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CcCCCC--cCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 555555 898888887761 1224666654 344445568888888888877653 355553
No 297
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=31.09 E-value=21 Score=30.90 Aligned_cols=57 Identities=12% Similarity=0.048 Sum_probs=38.1
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|.+++| .+|.+.++++++ -.. ...++++ .++--+..++.+|..++.+.+.+ ++.+|+
T Consensus 9 Pf~~dg-~iD~~~l~~lv~~li~~-v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~-rvpvia 67 (283)
T 2pcq_A 9 PFDREG-RLDEEAFRELAQALEPL-VDGLLVY-GSNGEGVHLTPEERARGLRALRP-RKPFLV 67 (283)
T ss_dssp CBCTTC-CBCHHHHHHHHHHHGGG-SSCCEET-CTTTTGGGSCHHHHHHHHHTCCC-SSCCEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHhh-CCEEEEC-CcCcCchhcCHHHHHHHHHHHHh-CCcEEE
Confidence 555555 789988888776 122 3555544 45555567899999999988776 565553
No 298
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=30.81 E-value=2.4e+02 Score=23.65 Aligned_cols=100 Identities=11% Similarity=-0.006 Sum_probs=47.3
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHh---h
Q 015768 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKT---L 159 (400)
Q Consensus 86 ~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~---l 159 (400)
.++...+++|.++...=..+...|.+.|.+|++.... .... ..+...+.++..+ ..|-. |.+.+++. +
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~~~ 101 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAV-VADLA----DLEGAANVAEEL 101 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEE-ECCTT----CHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEE-EecCC----CHHHHHHHHHHH
Confidence 4444455555554333345555677788887776532 2222 2233445566655 54422 44444444 2
Q ss_pred ccCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 160 ETKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 160 ~~~~~~~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
.....+..++-+......+. -.+.+++++..+
T Consensus 102 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (273)
T 3uf0_A 102 AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLT 135 (273)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 22222465554322222221 236566665554
No 299
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.65 E-value=47 Score=29.10 Aligned_cols=59 Identities=10% Similarity=0.045 Sum_probs=39.7
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++++|+
T Consensus 34 Pf~~dg-~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 34 PFDAQG-RLDWDSLAKLVDFHLQEGTNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHHTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 566665 7899999887761 1224666654 344455678999999999887653 466665
No 300
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=30.63 E-value=2.6e+02 Score=23.99 Aligned_cols=109 Identities=11% Similarity=0.109 Sum_probs=60.0
Q ss_pred CcHHHHHHHHHHHHhhcCC--------CCCcE-EEeCChHHHHHHHHHHhcCC---CCEEEEeCCCccchhHHHHhcCcE
Q 015768 69 GLPELRDALVKKLNQENKL--------YKSSV-MVTAGANQAFVNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVT 136 (400)
Q Consensus 69 g~~~~~~~~a~~l~~~~~~--------~~~~i-~~~~g~t~a~~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~ 136 (400)
..+.+++++++. ++.+++ ++.+| ++.+|.-..+..++.....+ .+.++|.. .++.....++..|+.
T Consensus 63 ~~~~L~~~f~~l-a~~l~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis-n~~~~~~~A~~~gIp 140 (286)
T 3n0v_A 63 DEAGFRAGLAER-SEAFGMAFELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVS-NHPDLEPLAHWHKIP 140 (286)
T ss_dssp CHHHHHHHHHHH-HGGGTCEEEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEE-SSSTTHHHHHHTTCC
T ss_pred CHHHHHHHHHHH-HHHcCCEEEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEe-CcHHHHHHHHHcCCC
Confidence 457788888763 445443 13344 55676666777777766432 33333332 234455668889998
Q ss_pred EEEeccCCCCCCCCC-HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 137 HILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 137 ~~~~~~~~~~~~~~~-~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
+..+ |..... ... -+.+.+.++... +.++++.. .+.+++.+.+
T Consensus 141 ~~~~-~~~~~~-r~~~~~~~~~~l~~~~-~Dlivla~----y~~il~~~~l 184 (286)
T 3n0v_A 141 YYHF-ALDPKD-KPGQERKVLQVIEETG-AELVILAR----YMQVLSPELC 184 (286)
T ss_dssp EEEC-CCBTTB-HHHHHHHHHHHHHHHT-CSEEEESS----CCSCCCHHHH
T ss_pred EEEe-CCCcCC-HHHHHHHHHHHHHhcC-CCEEEecc----cccccCHHHH
Confidence 8877 653221 001 123444554322 47877653 5677885444
No 301
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=30.56 E-value=1.6e+02 Score=25.88 Aligned_cols=24 Identities=17% Similarity=0.266 Sum_probs=14.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNT 205 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a 205 (400)
+.++.+++.++++++|+.+.+.-.
T Consensus 102 ~~~~~~~l~~~a~~~~~~~~v~~~ 125 (354)
T 3db2_A 102 SLDHAQRIDQVIKETGVKFLCGHS 125 (354)
T ss_dssp SHHHHHHHHHHHHHHCCCEEEECG
T ss_pred CHHHHHHHHHHHHHcCCeEEEeec
Confidence 455566666666666666655443
No 302
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=30.46 E-value=44 Score=29.30 Aligned_cols=59 Identities=14% Similarity=0.211 Sum_probs=40.3
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 35 Pf~~dg-~iD~~~l~~lv~~li~~Gv~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 35 PFAADG-GLDLPALGRSIERLIDGGVHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred cCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 566665 7899999988761 2224666644 344445678999999999987753 455655
No 303
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=30.31 E-value=2.2e+02 Score=23.81 Aligned_cols=64 Identities=13% Similarity=0.043 Sum_probs=35.2
Q ss_pred EEEeCChHHHH-HHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 92 VMVTAGANQAF-VNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 92 i~~~~g~t~a~-~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
+++.+|++.++ ..+.+.|.+.|.+|++..-.-.......+..+.++..+ ..|-. |.+.++++++
T Consensus 29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv~----d~~~v~~~~~ 93 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVF-SANLS----DRKSIKQLAE 93 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEE-ECCTT----SHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEE-EeecC----CHHHHHHHHH
Confidence 44444444554 44555677788888776544333344445556665555 44422 5566665554
No 304
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=30.17 E-value=1.1e+02 Score=26.63 Aligned_cols=71 Identities=13% Similarity=0.016 Sum_probs=41.5
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+....++++.+ ..+.. ...+...++++.+ |-|+++-|- ..+.++.+++.++++++|+.+.+
T Consensus 55 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~~G---khVl~EKP~-----a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 55 YGSYEELAKDPNVEVAYV-GTQHP---QHKAAVMLCLAAG---KAVLCEKPM-----GVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp ESSHHHHHHCTTCCEEEE-CCCGG---GHHHHHHHHHHTT---CEEEEESSS-----SSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEE-CCCcH---HHHHHHHHHHhcC---CEEEEECCC-----CCCHHHHHHHHHHHHHhCCEEEE
Confidence 455566665556666666 33322 2345555555543 556666442 24667788888888888877776
Q ss_pred ccc
Q 015768 203 DNT 205 (400)
Q Consensus 203 D~a 205 (400)
--.
T Consensus 123 ~~~ 125 (334)
T 3ohs_X 123 AIW 125 (334)
T ss_dssp ECG
T ss_pred EEh
Confidence 443
No 305
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367}
Probab=30.05 E-value=2.6e+02 Score=24.03 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=8.9
Q ss_pred EEEeCChHHHHHHHHHH
Q 015768 92 VMVTAGANQAFVNIVLT 108 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~ 108 (400)
+.+.+|.|+++..+..+
T Consensus 120 v~viPGiSA~~aA~a~~ 136 (296)
T 3kwp_A 120 VVPLPGANAGLTALIAS 136 (296)
T ss_dssp EEECCCCCHHHHHHHHH
T ss_pred eeeCCCcccchHHHHhc
Confidence 55666665554444433
No 306
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.82 E-value=2.5e+02 Score=24.16 Aligned_cols=109 Identities=11% Similarity=0.093 Sum_probs=59.0
Q ss_pred CcHHHHHHHHHHHHhhcCC--------CCCcE-EEeCChHHHHHHHHHHhcC---CCCEEEEeCCCccchhHHHHhcCcE
Q 015768 69 GLPELRDALVKKLNQENKL--------YKSSV-MVTAGANQAFVNIVLTLCD---AGDSVVMFAPYYFNSYMSFQMTGVT 136 (400)
Q Consensus 69 g~~~~~~~~a~~l~~~~~~--------~~~~i-~~~~g~t~a~~~~~~~l~~---~gd~vlv~~p~~~~~~~~~~~~g~~ 136 (400)
..+.+++++++. ++.+++ ++.++ ++.+|....+..++..... +.+.++|.. .++.....++..|+.
T Consensus 68 ~~~~L~~~f~~l-a~~~~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis-n~~~~~~~A~~~gIp 145 (292)
T 3lou_A 68 RVDALRREFEPI-AERFRMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVS-NHPDFAPLAAQHGLP 145 (292)
T ss_dssp CHHHHHHHHHHH-HHHHTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEE-SSSTTHHHHHHTTCC
T ss_pred CHHHHHHHHHHH-HHhcCcEEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEe-CcHHHHHHHHHcCCC
Confidence 356777777653 444442 13344 5567766677777776643 233333332 233455668889998
Q ss_pred EEEeccCCCCCCCCC-HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 137 HILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 137 ~~~~~~~~~~~~~~~-~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
+..+ |..... ... -+.+.+.++... +.++++.. .+.+++.+.+
T Consensus 146 ~~~~-~~~~~~-r~~~~~~~~~~l~~~~-~Dlivla~----y~~il~~~~l 189 (292)
T 3lou_A 146 FRHF-PITADT-KAQQEAQWLDVFETSG-AELVILAR----YMQVLSPEAS 189 (292)
T ss_dssp EEEC-CCCSSC-HHHHHHHHHHHHHHHT-CSEEEESS----CCSCCCHHHH
T ss_pred EEEe-CCCcCC-HHHHHHHHHHHHHHhC-CCEEEecC----chhhCCHHHH
Confidence 8877 654321 001 123444554322 57887653 5677885444
No 307
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=29.66 E-value=2.8e+02 Score=24.04 Aligned_cols=109 Identities=12% Similarity=0.174 Sum_probs=58.0
Q ss_pred CcHHHHHHHHHHHHhhcCC--------CCCcE-EEeCChHHHHHHHHHHhcCC---CCEEEEeCCCccchhHHHHhcCcE
Q 015768 69 GLPELRDALVKKLNQENKL--------YKSSV-MVTAGANQAFVNIVLTLCDA---GDSVVMFAPYYFNSYMSFQMTGVT 136 (400)
Q Consensus 69 g~~~~~~~~a~~l~~~~~~--------~~~~i-~~~~g~t~a~~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~ 136 (400)
..+.+++++++. ++.+++ ++.+| ++.+|....+..++.....+ .+.++|.. .++.....++..|+.
T Consensus 78 ~~~~L~~~l~~l-a~~l~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Vis-n~~~~~~~A~~~gIp 155 (302)
T 3o1l_A 78 DLDGFREAFTPI-AEEFSMDWRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVIS-NHQDLRSMVEWHDIP 155 (302)
T ss_dssp CHHHHHHHHHHH-HHHHTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEE-SSSTTHHHHHTTTCC
T ss_pred CHHHHHHHHHHH-HHHhCCeeeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEE-CcHHHHHHHHHcCCC
Confidence 456788777653 444443 23344 55566556677777765432 23333322 233455677888988
Q ss_pred EEEeccCCCCCCCCC-HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHH
Q 015768 137 HILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 137 ~~~~~~~~~~~~~~~-~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 186 (400)
+..+ |..... ... -+.+.+.++... +.++++.. .+.+++.+.+
T Consensus 156 ~~~~-~~~~~~-r~~~~~~~~~~l~~~~-~DliVlag----ym~IL~~~~l 199 (302)
T 3o1l_A 156 YYHV-PVDPKD-KEPAFAEVSRLVGHHQ-ADVVVLAR----YMQILPPQLC 199 (302)
T ss_dssp EEEC-CCCSSC-CHHHHHHHHHHHHHTT-CSEEEESS----CCSCCCTTHH
T ss_pred EEEc-CCCcCC-HHHHHHHHHHHHHHhC-CCEEEHhH----hhhhcCHHHH
Confidence 8777 543221 101 123445555432 57887653 4667774444
No 308
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=29.48 E-value=2.5e+02 Score=23.45 Aligned_cols=95 Identities=16% Similarity=0.090 Sum_probs=47.0
Q ss_pred EEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCCe
Q 015768 92 VMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPK 166 (400)
Q Consensus 92 i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~~ 166 (400)
+++.+|++.++- .+...|.+.|.+|++....-..........+..+..+ ..|- -|.+.+++.+. ....+.
T Consensus 7 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dv----~~~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAI-SLDV----TDGERIDVVAADVLARYGRVD 81 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEE-ECCT----TCHHHHHHHHHHHHHHHSCCS
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEE-EeeC----CCHHHHHHHHHHHHHhCCCCC
Confidence 444455445544 4455677788888777655444555555555444444 4432 25555655544 112245
Q ss_pred EEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 167 LVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 167 ~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
.++-+....+.+. -.+.+++++..+
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 5553322222222 245555555443
No 309
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=29.40 E-value=1.8e+02 Score=24.03 Aligned_cols=86 Identities=14% Similarity=0.133 Sum_probs=46.3
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCEE--EEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCH----HHHHHhhccCC
Q 015768 92 VMVTAGANQAFVNIVLTLCDA--GDSV--VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA----DWLEKTLETKP 163 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~~~--gd~v--lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----e~l~~~l~~~~ 163 (400)
+++.+|+..-...++.++.+. +-.| +++++.-......++..|+.+..+++.+ +. +- +++.+.++...
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~---~~-~r~~~~~~~~~~l~~~~ 101 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAA---YP-SRTAFDAALAERLQAYG 101 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGG---SS-SHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccc---cc-chhhccHHHHHHHHhcC
Confidence 344466556667777777654 2222 4445433344567788999877662221 11 21 23444454332
Q ss_pred CCeEEEEeCCCCCCccCCCHHHH
Q 015768 164 TPKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 164 ~~~~v~l~~p~nptG~~~~~~~l 186 (400)
+.++++.. .|.+++.+.+
T Consensus 102 -~Dliv~ag----y~~IL~~~~l 119 (229)
T 3auf_A 102 -VDLVCLAG----YMRLVRGPML 119 (229)
T ss_dssp -CSEEEESS----CCSCCCHHHH
T ss_pred -CCEEEEcC----hhHhCCHHHH
Confidence 57777653 5778884444
No 310
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=29.31 E-value=75 Score=27.46 Aligned_cols=53 Identities=17% Similarity=0.086 Sum_probs=37.2
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+.
T Consensus 14 Pf~~dg-~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 14 PFKTDG-TVDIDAMIAHARRCLSNGCDSVTLF-GTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 555555 789999988876 11224666654 455556779999999999988764
No 311
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=29.16 E-value=2.4e+02 Score=24.44 Aligned_cols=97 Identities=12% Similarity=0.070 Sum_probs=51.1
Q ss_pred CcEEEeCC-hHHHHHHHHHHhcCCCCEEEEe-CCC--ccchh---HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccC
Q 015768 90 SSVMVTAG-ANQAFVNIVLTLCDAGDSVVMF-APY--YFNSY---MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETK 162 (400)
Q Consensus 90 ~~i~~~~g-~t~a~~~~~~~l~~~gd~vlv~-~p~--~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~ 162 (400)
..|++|.+ |.-+ ..++..|.+.|..|.+. ... ...-. ..+...+++++.. .+. |.+.+.++++..
T Consensus 11 ~~IlVtGatG~iG-~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~-Dl~------d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAGATGFIG-QFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYG-LIN------EQEAMEKILKEH 82 (346)
T ss_dssp CCEEEECTTSHHH-HHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEEC-CTT------CHHHHHHHHHHT
T ss_pred CeEEEECCCcHHH-HHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEe-ecC------CHHHHHHHHhhC
Confidence 35777765 3333 34445555556555433 322 11111 2234567777655 332 678888888732
Q ss_pred CCCeEEEEeCC-CCCCccCCCHHHHHHHHHHHHHcC-CEEEE
Q 015768 163 PTPKLVSVVNP-GNPSGTYIPERLLKRISDLCKAAG-SWLVV 202 (400)
Q Consensus 163 ~~~~~v~l~~p-~nptG~~~~~~~l~~i~~l~~~~~-~~li~ 202 (400)
. +.+|+-+.. .|.. . ...+++.|++.+ +..++
T Consensus 83 ~-~d~Vi~~a~~~n~~----~---~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 83 E-IDIVVSTVGGESIL----D---QIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp T-CCEEEECCCGGGGG----G---HHHHHHHHHHHCCCSEEE
T ss_pred C-CCEEEECCchhhHH----H---HHHHHHHHHHcCCceEEe
Confidence 2 355554432 2322 2 467888888888 65554
No 312
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=29.12 E-value=1.5e+02 Score=24.03 Aligned_cols=85 Identities=13% Similarity=0.100 Sum_probs=46.3
Q ss_pred EEeCChHHHHHHHHHHhcCC--CCEE--EEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCH----HHHHHhhccCCC
Q 015768 93 MVTAGANQAFVNIVLTLCDA--GDSV--VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA----DWLEKTLETKPT 164 (400)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~~~--gd~v--lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----e~l~~~l~~~~~ 164 (400)
++.+|+......++.++.+. +-.| +++++.-......++..|+.+..+.+.+-. +. +++.+.++...
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~----~~~~~~~~~~~~l~~~~- 82 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYP----SKAAFESEILRELKGRQ- 82 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSS----SHHHHHHHHHHHHHHTT-
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCccccc----chhhhHHHHHHHHHhcC-
Confidence 44455555666677777654 3233 455544445667778899887766222111 22 23344444332
Q ss_pred CeEEEEeCCCCCCccCCCHHHH
Q 015768 165 PKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l 186 (400)
+.++++.. .|.+++.+.+
T Consensus 83 ~Dliv~a~----y~~il~~~~l 100 (212)
T 3av3_A 83 IDWIALAG----YMRLIGPTLL 100 (212)
T ss_dssp CCEEEESS----CCSCCCHHHH
T ss_pred CCEEEEch----hhhhCCHHHH
Confidence 57777652 4677884444
No 313
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=28.98 E-value=1.4e+02 Score=26.36 Aligned_cols=72 Identities=14% Similarity=0.148 Sum_probs=43.3
Q ss_pred cCCCCEEEEeCCCccch----------hHHHHhcCcEEEEeccCCCC--CC--CCC---HHHHHHhhccCCCCeEEEEeC
Q 015768 110 CDAGDSVVMFAPYYFNS----------YMSFQMTGVTHILVGPCSSK--TL--HPD---ADWLEKTLETKPTPKLVSVVN 172 (400)
Q Consensus 110 ~~~gd~vlv~~p~~~~~----------~~~~~~~g~~~~~~~~~~~~--~~--~~~---~e~l~~~l~~~~~~~~v~l~~ 172 (400)
+++||+|-+..|+.... ...++..|.+++.- +.-.. ++ .-+ +++|.+++. ++.+++|+...
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~ag~d~~Ra~dL~~a~~-Dp~i~aI~~~r 87 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEG-SLTGRYDYYRSGSIQERAKELNALIR-NPNVSCIMSTI 87 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHH-CTTEEEEEESC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEc-ccccccccccCCCHHHHHHHHHHHhh-CCCCCEEEEcc
Confidence 57899999999987431 12456789998876 44222 21 112 355555554 34478888765
Q ss_pred CCCCCccCCCH
Q 015768 173 PGNPSGTYIPE 183 (400)
Q Consensus 173 p~nptG~~~~~ 183 (400)
...-+-.+++.
T Consensus 88 GG~g~~rlL~~ 98 (336)
T 3sr3_A 88 GGMNSNSLLPY 98 (336)
T ss_dssp CCSCGGGGGGG
T ss_pred ccccHHHHhhh
Confidence 55545555553
No 314
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.98 E-value=2.4e+02 Score=23.15 Aligned_cols=66 Identities=15% Similarity=0.144 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHHHhhcCCCCCcEEEe-CChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEe
Q 015768 70 LPELRDALVKKLNQENKLYKSSVMVT-AGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILV 140 (400)
Q Consensus 70 ~~~~~~~~a~~l~~~~~~~~~~i~~~-~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~ 140 (400)
.+.+.+.+.+ +.+.++.. ..+.+. .+-.+++..+-..+.+.|..|++...+ ....++ ..+..++.+
T Consensus 21 ~~~L~~~~~~-i~~e~~~~-~~I~vi~~~le~av~~a~~~~~~~~~dVIISRGg---ta~~Lr~~~~iPVV~I 88 (225)
T 2pju_A 21 VTRLFELFRD-ISLEFDHL-ANITPIQLGFEKAVTYIRKKLANERCDAIIAAGS---NGAYLKSRLSVPVILI 88 (225)
T ss_dssp CHHHHHHHHH-HHTTTTTT-CEEEEECCCHHHHHHHHHHHTTTSCCSEEEEEHH---HHHHHHTTCSSCEEEE
T ss_pred hHHHHHHHHH-HHHhhCCC-ceEEEecCcHHHHHHHHHHHHhcCCCeEEEeCCh---HHHHHHhhCCCCEEEe
Confidence 3555553333 33333322 234443 344556666655444344445555432 233333 345666666
No 315
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=28.72 E-value=2.6e+02 Score=24.61 Aligned_cols=74 Identities=9% Similarity=0.008 Sum_probs=49.2
Q ss_pred CccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
.|..+.+.+....++.+.+ ..... ...+...++++.+ |-|++.-|- ..+.++.+++.++++++|+.+.
T Consensus 56 ~~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKPl-----a~~~~e~~~l~~~a~~~g~~~~ 123 (359)
T 3m2t_A 56 VLDNVPAMLNQVPLDAVVM-AGPPQ---LHFEMGLLAMSKG---VNVFVEKPP-----CATLEELETLIDAARRSDVVSG 123 (359)
T ss_dssp EESSHHHHHHHSCCSEEEE-CSCHH---HHHHHHHHHHHTT---CEEEECSCS-----CSSHHHHHHHHHHHHHHTCCEE
T ss_pred ccCCHHHHhcCCCCCEEEE-cCCcH---HHHHHHHHHHHCC---CeEEEECCC-----cCCHHHHHHHHHHHHHcCCEEE
Confidence 3556677777777777777 33322 2345556666544 567766542 3577889999999999999888
Q ss_pred Eccccc
Q 015768 202 VDNTYE 207 (400)
Q Consensus 202 ~D~a~~ 207 (400)
+--.+.
T Consensus 124 v~~~~R 129 (359)
T 3m2t_A 124 VGMNFK 129 (359)
T ss_dssp ECCHHH
T ss_pred EEeccc
Confidence 765544
No 316
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=28.62 E-value=1.1e+02 Score=26.36 Aligned_cols=78 Identities=21% Similarity=0.199 Sum_probs=46.1
Q ss_pred CCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCE
Q 015768 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSW 199 (400)
Q Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~ 199 (400)
.|+|.+..++.+....+++.+ -..+. ...+.++++++.+. +.+++.. +| ++.++.+++.+.++++++.
T Consensus 50 ~~vy~sl~el~~~~~~Dv~Ii-~vp~~---~~~~~~~ea~~~Gi--~~vVi~t----~G--~~~~~~~~l~~~a~~~gi~ 117 (288)
T 1oi7_A 50 VPVYDTVKEAVAHHEVDASII-FVPAP---AAADAALEAAHAGI--PLIVLIT----EG--IPTLDMVRAVEEIKALGSR 117 (288)
T ss_dssp EEEESSHHHHHHHSCCSEEEE-CCCHH---HHHHHHHHHHHTTC--SEEEECC----SC--CCHHHHHHHHHHHHHHTCE
T ss_pred EEeeCCHHHHhhcCCCCEEEE-ecCHH---HHHHHHHHHHHCCC--CEEEEEC----CC--CCHHHHHHHHHHHHHcCCE
Confidence 445556666665335554443 22222 13556666666554 6544432 23 3556688999999999999
Q ss_pred EEEccccccc
Q 015768 200 LVVDNTYEYF 209 (400)
Q Consensus 200 li~D~a~~~~ 209 (400)
++-..+.+..
T Consensus 118 vigPNc~Gii 127 (288)
T 1oi7_A 118 LIGGNCPGII 127 (288)
T ss_dssp EEESSSCEEE
T ss_pred EEeCCCCeEE
Confidence 8877766533
No 317
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=28.61 E-value=1.3e+02 Score=26.71 Aligned_cols=71 Identities=11% Similarity=0.042 Sum_probs=41.7
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+....++++.+ ..... ...+...++++.+ |-|++.-|- ..+.++.+++.++|+++|+.+.+
T Consensus 54 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKPl-----a~~~~e~~~l~~~a~~~g~~~~v 121 (358)
T 3gdo_A 54 VHELEEITNDPAIELVIV-TTPSG---LHYEHTMACIQAG---KHVVMEKPM-----TATAEEGETLKRAADEKGVLLSV 121 (358)
T ss_dssp ESSTHHHHTCTTCCEEEE-CSCTT---THHHHHHHHHHTT---CEEEEESSC-----CSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCHHHHhcCCCCCEEEE-cCCcH---HHHHHHHHHHHcC---CeEEEecCC-----cCCHHHHHHHHHHHHHcCCeEEE
Confidence 445556665555666666 33322 2455555566543 556655442 24667788888888888887776
Q ss_pred ccc
Q 015768 203 DNT 205 (400)
Q Consensus 203 D~a 205 (400)
--.
T Consensus 122 ~~~ 124 (358)
T 3gdo_A 122 YHN 124 (358)
T ss_dssp ECG
T ss_pred eee
Confidence 443
No 318
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=28.59 E-value=2.2e+02 Score=25.82 Aligned_cols=74 Identities=11% Similarity=0.070 Sum_probs=50.0
Q ss_pred CccchhHHHHh-----cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 122 YYFNSYMSFQM-----TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 122 ~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
.|..+.+.+.. -.++++.+ ..... ...+...++++.+ |-|+++-|- ..+.++.++|.++++++
T Consensus 93 ~~~~~~~ll~~~~~~~~~vD~V~I-~tp~~---~H~~~~~~al~aG---khVl~EKPl-----a~~~~ea~~l~~~a~~~ 160 (417)
T 3v5n_A 93 VYSDFKEMAIREAKLKNGIEAVAI-VTPNH---VHYAAAKEFLKRG---IHVICDKPL-----TSTLADAKKLKKAADES 160 (417)
T ss_dssp BCSCHHHHHHHHHHCTTCCSEEEE-CSCTT---SHHHHHHHHHTTT---CEEEEESSS-----CSSHHHHHHHHHHHHHC
T ss_pred ccCCHHHHHhcccccCCCCcEEEE-CCCcH---HHHHHHHHHHhCC---CeEEEECCC-----cCCHHHHHHHHHHHHHc
Confidence 56667777766 56777766 43322 2466666666654 567766552 24778899999999999
Q ss_pred CCEEEEccccc
Q 015768 197 GSWLVVDNTYE 207 (400)
Q Consensus 197 ~~~li~D~a~~ 207 (400)
|+.+.+...+.
T Consensus 161 g~~~~v~~~~R 171 (417)
T 3v5n_A 161 DALFVLTHNYT 171 (417)
T ss_dssp SSCEEEECGGG
T ss_pred CCEEEEEeccc
Confidence 99888866554
No 319
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=28.31 E-value=3.1e+02 Score=24.15 Aligned_cols=97 Identities=10% Similarity=0.089 Sum_probs=52.1
Q ss_pred hHHHHHHHHHHhcC-CCCEEEEeCCCccchhHHHHhcCcE---EEEeccCCCCCCCCCHHHH-HH---h---hccCCCCe
Q 015768 98 ANQAFVNIVLTLCD-AGDSVVMFAPYYFNSYMSFQMTGVT---HILVGPCSSKTLHPDADWL-EK---T---LETKPTPK 166 (400)
Q Consensus 98 ~t~a~~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~e~l-~~---~---l~~~~~~~ 166 (400)
+|.++..+..+..+ +|..++..+..+..-...++..|.. +....|. +.|.+ .. . +... .++
T Consensus 42 TtL~Lq~~~~~~~~g~g~~vlyId~E~s~~~~ra~~lGvd~d~llv~~~~-------~~E~~~l~i~~~l~~i~~~-~~~ 113 (333)
T 3io5_A 42 SNFGLTMVSSYMRQYPDAVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQ-------SLEQLRIDMVNQLDAIERG-EKV 113 (333)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEESSCCCCHHHHHHTTCCGGGEEEEECS-------BHHHHHHHHHHHHHTCCTT-CCE
T ss_pred HHHHHHHHHHHHhcCCCceEEEEeccchhhHHHHHHhCCCHHHeEEEcCC-------CHHHHHHHHHHHHHHhhcc-Cce
Confidence 55666666665543 4677777766664444457777763 3322121 33333 22 2 3333 378
Q ss_pred EEEEeCCCCCC------ccC--------CC----HHHHHHHHHHHHHcCCEEEE
Q 015768 167 LVSVVNPGNPS------GTY--------IP----ERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 167 ~v~l~~p~npt------G~~--------~~----~~~l~~i~~l~~~~~~~li~ 202 (400)
+|++-+.+... |.. .- ...+++|..+++++|+.+|+
T Consensus 114 lvVIDSI~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~ 167 (333)
T 3io5_A 114 VVFIDSLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIA 167 (333)
T ss_dssp EEEEECSTTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEecccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 99888765432 111 00 12255566678889988664
No 320
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=28.25 E-value=2.5e+02 Score=23.08 Aligned_cols=97 Identities=10% Similarity=0.081 Sum_probs=47.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCC
Q 015768 90 SSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTP 165 (400)
Q Consensus 90 ~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~ 165 (400)
..+++|.++...=..+.+.|.+.|.+|++..-.-.......+..+.++..+ ..|-. +.+.+++.++ ....+
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~~~~~~~~~~~~~g~i 84 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV-AADIS----KEADVDAAVEAALSKFGKV 84 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEE-ECCTT----SHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEE-EecCC----CHHHHHHHHHHHHHhcCCC
Confidence 345555444333345556677778888776544333334444455555555 44422 4555555543 11224
Q ss_pred eEEEEeCC-CCCCcc--CCCHHHHHHHHH
Q 015768 166 KLVSVVNP-GNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 166 ~~v~l~~p-~nptG~--~~~~~~l~~i~~ 191 (400)
..++-+.. ..+.+. ..+.+++++..+
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 55554422 221222 236666665544
No 321
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=28.20 E-value=1.7e+02 Score=23.79 Aligned_cols=45 Identities=18% Similarity=0.182 Sum_probs=30.9
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEccccc
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~ 207 (400)
.+++++.+.. .+..++++.|+. ..+++++.|.+.|+..|..+.-.
T Consensus 130 ~~dl~ell~~--~ID~ViIA~Ps~---------~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 130 VDLLPQRVPG--RIEIALLTVPRE---------AAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GGGHHHHSTT--TCCEEEECSCHH---------HHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHhHHHHHHc--CCCEEEEeCCch---------hHHHHHHHHHHcCCCEEEECCcc
Confidence 3457777765 368888886643 24578888888998877665544
No 322
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=28.16 E-value=2.1e+02 Score=25.45 Aligned_cols=21 Identities=10% Similarity=-0.070 Sum_probs=10.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEE
Q 015768 182 PERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~ 202 (400)
+.++.++|.++++++|+.+.+
T Consensus 119 ~~~~~~~l~~~a~~~~~~~~v 139 (383)
T 3oqb_A 119 NFEEALEVVKLANSKGVKHGT 139 (383)
T ss_dssp SHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEE
Confidence 344455555555555554444
No 323
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=28.16 E-value=2.8e+02 Score=23.66 Aligned_cols=137 Identities=9% Similarity=0.010 Sum_probs=66.4
Q ss_pred cHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCC--------------hH----HHHHHHH
Q 015768 45 PKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG--------------AN----QAFVNIV 106 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g--------------~t----~a~~~~~ 106 (400)
..++.+.+..+++.+. ..+.....+..-++.+.+.+++ +.+++++++= +. .+++..+
T Consensus 69 ~~~~~~~l~~Al~~Gi-~~~DTA~~Yg~sE~~lG~al~~----~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~e~SL 143 (292)
T 4exb_A 69 DREAADLLALARDLGI-NLIDTAPAYGRSEERLGPLLRG----QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSL 143 (292)
T ss_dssp HHHHHHHHHHHHHTTC-CEEECCTTSTTHHHHHHHHHTT----TGGGCEEEEEESBC--CCSCCBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC-CEEEcCCccchHHHHHHHHhcc----CCCcEEEEEeeccccCCCCccCCCCHHHHHHHHHHHH
Confidence 3567777888877652 2111111111234556666643 3455555421 11 2333333
Q ss_pred HHhc-CCCCEEEEeCC--Ccc-----chhHH---HHhcC-cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 107 LTLC-DAGDSVVMFAP--YYF-----NSYMS---FQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 107 ~~l~-~~gd~vlv~~p--~~~-----~~~~~---~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
..|- .-=|-.++..| ... ..... ++..| ++.+-++ +.+.+.++++++. +.++-+ ..
T Consensus 144 ~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~Gkir~iGvS-------n~~~~~l~~~~~~---~~~~Q~--~~ 211 (292)
T 4exb_A 144 KRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLS-------GKTVEGGLRALRE---GDCAMV--TY 211 (292)
T ss_dssp HHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTTSEEEEEEE-------CSSHHHHHHHHHH---SSEEEE--EC
T ss_pred HHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCCCceEEEeC-------CCCHHHHHHHHHh---hcEEee--cc
Confidence 3332 12266777777 221 22222 23444 3444441 2366777777654 243333 33
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
||.-.- . .++.+.|+++|+.++.=
T Consensus 212 ~~~~~~----~-~~l~~~~~~~gi~v~a~ 235 (292)
T 4exb_A 212 NLNERA----E-RPVIEYAAAHAKGILVK 235 (292)
T ss_dssp SSSCCT----T-HHHHHHHHHTTCEEEEE
T ss_pred ccccCC----H-HHHHHHHHHCCcEEEEe
Confidence 443211 1 67888999999988753
No 324
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=28.15 E-value=72 Score=27.92 Aligned_cols=68 Identities=9% Similarity=0.016 Sum_probs=43.1
Q ss_pred cCcEEEEeccCCC-CCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 133 TGVTHILVGPCSS-KTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 133 ~g~~~~~~~~~~~-~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
.|+-+..+-|.++ +| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 13 ~Gv~~a~vTPf~~~dg-~iD~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 13 ETISGIPITPFRKSDG-SIDWHHYKETVDRIVDNGIDVIVPC-GNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp SSEEECCCCCBCTTTC-CBCHHHHHHHHHHHHTTTCCEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CceEEeeeCCccCCCC-CCCHHHHHHHHHHHHHcCCCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4553332226666 54 789999988876 12234666643 344445678999999999887654 466665
No 325
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=28.13 E-value=62 Score=28.80 Aligned_cols=59 Identities=17% Similarity=0.124 Sum_probs=37.5
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+...++.+|+
T Consensus 37 PF~~dg-~ID~~~l~~lv~~li~~Gv~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~grvpVia 97 (344)
T 2hmc_A 37 PCRQDR-TPDFDALVRKGKELIADGMSAVVYC-GSMGDWPLLTDEQRMEGVERLVKAGIPVIV 97 (344)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTTCCCEEES-SGGGTGGGSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEeC-ccCcChhhCCHHHHHHHHHHHhCCCCcEEE
Confidence 555554 789998888776 11224566544 344445678988888888874444566664
No 326
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=28.12 E-value=79 Score=27.02 Aligned_cols=85 Identities=11% Similarity=0.102 Sum_probs=46.6
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCc--cchhHHHHhcCcEEEEeccCCCCCCCCC-HHHHHHhhccC
Q 015768 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYY--FNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETK 162 (400)
Q Consensus 86 ~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~e~l~~~l~~~ 162 (400)
|+.+ ++-..+.++++...+.....+|.+|++..+.- ....+.++..|+++..+ +.-..-...+ .+.+.+.+...
T Consensus 132 G~~~--~~p~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~-~~Y~~~~~~~~~~~~~~~l~~~ 208 (286)
T 1jr2_A 132 GLDT--EGETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESI-TVYQTVAHPGIQGNLNSYYSQQ 208 (286)
T ss_dssp TCCC--SCCSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEE-ECEEEEECTTHHHHHHHHHHHH
T ss_pred CCCc--CCCCccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEE-EEEEEeeCCCcHHHHHHHHHhC
Confidence 6554 22234456666665554434678888876653 34567888899877766 5432111112 23555555431
Q ss_pred CCCeEEEEeCC
Q 015768 163 PTPKLVSVVNP 173 (400)
Q Consensus 163 ~~~~~v~l~~p 173 (400)
..+.+|++++|
T Consensus 209 ~~~d~v~ftS~ 219 (286)
T 1jr2_A 209 GVPASITFFSP 219 (286)
T ss_dssp CSCSEEEESSH
T ss_pred CCCCEEEEECh
Confidence 12467776644
No 327
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=28.04 E-value=1.4e+02 Score=26.52 Aligned_cols=23 Identities=4% Similarity=0.026 Sum_probs=14.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhccC
Q 015768 368 VEDDCKAAADRLRRGLEELVKDG 390 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~~~~~ 390 (400)
+.+|-...++.+..+.++..+..
T Consensus 324 ~~~dal~~~~ii~A~~~Sa~~g~ 346 (359)
T 3e18_A 324 QNEEVYQVLKLIEAIFEAAETNR 346 (359)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHHHHhhCc
Confidence 56666677777777766665543
No 328
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=27.65 E-value=1.1e+02 Score=28.91 Aligned_cols=66 Identities=11% Similarity=0.032 Sum_probs=39.3
Q ss_pred HhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 131 QMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 131 ~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
...+.++..+-..|+++|.+..+...++-.... .+ ......|-.++.+++++|.+.|+++||-||-
T Consensus 184 a~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga-~~-----~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 184 ARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGG-ST-----EVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTT-SC-----CTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHcCCcEEEEEeccCCCceehhhhhHHHHhhcC-cc-----ccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 345565554414456677665444433322111 00 0112236788999999999999999999884
No 329
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=27.42 E-value=47 Score=30.74 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMY 211 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~ 211 (400)
+.++++++++.|+++|+.||.|-++-+...
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 578899999999999999999999865543
No 330
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=27.19 E-value=78 Score=27.32 Aligned_cols=53 Identities=11% Similarity=0.009 Sum_probs=36.4
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.+++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+.
T Consensus 10 Pf~~dg-~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 10 PFTKDN-RIDKEKLKIHAENLIRKGIDKLFVN-GTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp CBCTTS-SBCHHHHHHHHHHHHHTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 555554 7899988888761 1224666654 455556678999999999988764
No 331
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=27.15 E-value=1.1e+02 Score=29.34 Aligned_cols=78 Identities=13% Similarity=0.116 Sum_probs=49.6
Q ss_pred CCCCEEEEeCCCccchh-------HHHHhcCcEEEEec--cCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 111 DAGDSVVMFAPYYFNSY-------MSFQMTGVTHILVG--PCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 111 ~~gd~vlv~~p~~~~~~-------~~~~~~g~~~~~~~--~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
+++|.|++.....++.. +.+...|++++..+ ...-.| ..|.++|...++.-. |+-++..+.
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~Sg-Ha~~~eL~~~i~~~~-Pk~vipvHG-------- 406 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASG-HASQEELKLILNLTT-PRFFLPWHG-------- 406 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCS-SCCHHHHHHHHHHHC-CSEEEEESB--------
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeC-CCCHHHHHHHHHhcC-CCEEEEEcC--------
Confidence 68899999887776652 33456788876531 112223 458888888877322 577776653
Q ss_pred CHHHHHHHHHHHHHcCC
Q 015768 182 PERLLKRISDLCKAAGS 198 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~ 198 (400)
....+.++++++++.|+
T Consensus 407 e~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 407 EVRHQMNFKWLAESMSR 423 (562)
T ss_dssp CHHHHHHHHHHHHTSSS
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 22347777778877664
No 332
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=27.14 E-value=1.3e+02 Score=26.98 Aligned_cols=24 Identities=13% Similarity=-0.166 Sum_probs=17.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHhccC
Q 015768 367 LVEDDCKAAADRLRRGLEELVKDG 390 (400)
Q Consensus 367 ~~~~~~~~~~~~l~~~l~~~~~~~ 390 (400)
.+.++-...++.+..+.++..+..
T Consensus 360 ~~~e~a~~~l~v~eA~~~Sa~~g~ 383 (387)
T 3moi_A 360 RDARWGKDTLEVCLAVLESSATGR 383 (387)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHHHHhhhcCC
Confidence 367888888888888877766544
No 333
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=27.03 E-value=1.3e+02 Score=26.82 Aligned_cols=21 Identities=5% Similarity=-0.056 Sum_probs=9.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 015768 368 VEDDCKAAADRLRRGLEELVK 388 (400)
Q Consensus 368 ~~~~~~~~~~~l~~~l~~~~~ 388 (400)
+-+|-...++.+..+.++..+
T Consensus 366 ~~~d~l~~~~i~~A~~~Sa~~ 386 (393)
T 4fb5_A 366 TFKDGLRIEKSVHAMAQSFHE 386 (393)
T ss_dssp BHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHc
Confidence 344444445555555454443
No 334
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=26.96 E-value=3.1e+02 Score=25.29 Aligned_cols=97 Identities=19% Similarity=0.236 Sum_probs=54.6
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHH-hcCcEEEEeccCCCCCCCCCHHHHHHhhccCCC
Q 015768 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQ-MTGVTHILVGPCSSKTLHPDADWLEKTLETKPT 164 (400)
Q Consensus 86 ~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~ 164 (400)
.++...+++..||..|...+- .|.+.|..|.+.+|....-...+. ..++..+.- .. ..+.+. +
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~-~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~-~~-------~~~~l~-----~-- 72 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKAR-LLLEAGARLTVNALTFIPQFTVWANEGMLTLVEG-PF-------DETLLD-----S-- 72 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHH-HHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEES-SC-------CGGGGT-----T--
T ss_pred ECCCCEEEEECCCHHHHHHHH-HHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEEC-CC-------CccccC-----C--
Confidence 344567888888877776664 555668788887776543322222 223443322 11 222221 1
Q ss_pred CeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE-EEcccc
Q 015768 165 PKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL-VVDNTY 206 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l-i~D~a~ 206 (400)
..+|+. .+.++ +--..+.+.|+++|+++ ++|+.-
T Consensus 73 ~~lVi~-at~~~-------~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 73 CWLAIA-ATDDD-------TVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp CSEEEE-CCSCH-------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ccEEEE-cCCCH-------HHHHHHHHHHHHcCCEEEECCCcc
Confidence 245543 34332 22567888999999987 566653
No 335
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=26.95 E-value=2.9e+02 Score=23.43 Aligned_cols=159 Identities=8% Similarity=-0.002 Sum_probs=71.0
Q ss_pred hcCCCeEEcCCCCCCC-CCcHHHHHHHHHhhcCCCCCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeC-C--hHHHH
Q 015768 27 RGAKNAVSLAQGVVYW-QPPKMAMEKVKELVWDPSISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTA-G--ANQAF 102 (400)
Q Consensus 27 ~~~~~~i~~~~~~~~~-~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~-g--~t~a~ 102 (400)
+.|-|+|.++..+++. .--|.++++..+++.++. ....+-+.+.+ +++.+ .+..=++++- + -..++
T Consensus 45 ~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~--------~~~~~~~~v~~-~r~~~-~~~Pivlm~Y~n~v~~~g~ 114 (271)
T 3nav_A 45 DAGADALELGMPFSDPLADGPTIQGANLRALAAKT--------TPDICFELIAQ-IRARN-PETPIGLLMYANLVYARGI 114 (271)
T ss_dssp HTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTC--------CHHHHHHHHHH-HHHHC-TTSCEEEEECHHHHHHTCH
T ss_pred HcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCC--------CHHHHHHHHHH-HHhcC-CCCCEEEEecCcHHHHHhH
Confidence 4566777776655443 223445555566655431 12223333332 22221 1212233331 1 01133
Q ss_pred HHHHHHhcCCC-CEEEEeCCCccc---hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCc
Q 015768 103 VNIVLTLCDAG-DSVVMFAPYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSG 178 (400)
Q Consensus 103 ~~~~~~l~~~g-d~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG 178 (400)
...+..+.+.| |.+++++-.+.. +...++..|...+++ -.+ . -+.+.+++..+... ..|++.+-.-.||
T Consensus 115 ~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~l-vap-~---t~~eri~~i~~~~~--gfiY~vs~~GvTG 187 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFI-APP-T---ASDETLRAVAQLGK--GYTYLLSRAGVTG 187 (271)
T ss_dssp HHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEE-ECT-T---CCHHHHHHHHHHCC--SCEEECCCC----
T ss_pred HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEE-ECC-C---CCHHHHHHHHHHCC--CeEEEEeccCCCC
Confidence 44455555555 777777665532 445667778876655 221 1 13455555554333 4566544334566
Q ss_pred cCC-CHHHHHHHHHHHHHc-CCEEEE
Q 015768 179 TYI-PERLLKRISDLCKAA-GSWLVV 202 (400)
Q Consensus 179 ~~~-~~~~l~~i~~l~~~~-~~~li~ 202 (400)
..- ..+.+.++.+.++++ ++++++
T Consensus 188 ~~~~~~~~~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 188 AETKANMPVHALLERLQQFDAPPALL 213 (271)
T ss_dssp ----CCHHHHHHHHHHHHTTCCCEEE
T ss_pred cccCCchhHHHHHHHHHHhcCCCEEE
Confidence 542 123455555555554 455555
No 336
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=26.92 E-value=95 Score=26.78 Aligned_cols=58 Identities=9% Similarity=0.087 Sum_probs=38.2
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+ +| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. .+++|+
T Consensus 12 Pf~-dg-~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 12 PFK-EG-EVDYEALGNLIEFHVDNGTDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp CEE-TT-EECHHHHHHHHHHHHTTTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcC-CC-CcCHHHHHHHHHHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 455 44 689888888776 12234666654 444455678999999988887653 466664
No 337
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=26.74 E-value=1.1e+02 Score=27.59 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=11.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEc
Q 015768 182 PERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D 203 (400)
+.++.++|.+++++.|+.+.+-
T Consensus 132 ~~~ea~~l~~~a~~~g~~~~v~ 153 (412)
T 4gqa_A 132 NEQQAQEMAQAARRAGVKTMVA 153 (412)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHhCCeeeec
Confidence 4444555555555555554443
No 338
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=26.34 E-value=55 Score=30.13 Aligned_cols=29 Identities=21% Similarity=0.188 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
+.++++++++.|+++|+.||.|-+.-+..
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 47889999999999999999999875443
No 339
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=26.17 E-value=63 Score=28.35 Aligned_cols=59 Identities=7% Similarity=-0.003 Sum_probs=0.0
Q ss_pred cCC-CCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCS-SKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~-~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+ ++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 21 Pf~~~dg-~iD~~~l~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 21 FFDSKTD-TLDLASQERYYAYLARSGLTGLVIL-GTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp CEETTTT-EECHHHHHHHHHHHHTTTCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CccCCCC-CCCHHHHHHHHHHHHHcCCCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
No 340
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=25.94 E-value=56 Score=30.12 Aligned_cols=29 Identities=17% Similarity=0.129 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
+.++++++++.|+++|+.||.|-+.-+..
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 57889999999999999999999876544
No 341
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=25.90 E-value=67 Score=27.88 Aligned_cols=58 Identities=7% Similarity=0.059 Sum_probs=39.6
Q ss_pred cCCCCCCCCCHHHHHHhhcc--CCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc----CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLET--KPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA----GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~~--~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~----~~~li~ 202 (400)
|. ++| .+|.+.++++++. ..+...++++ .++--+..++.+|..++.+.+.+. ++.+|+
T Consensus 19 Pf-~dg-~iD~~~l~~lv~~li~~Gv~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 19 PF-KNG-KVDEQSYARLIKRQIENGIDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp CE-ETT-EECHHHHHHHHHHHHHTTCCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred Cc-CCC-CCCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 55 444 7899998888761 2224666644 455556678999999999987664 477776
No 342
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=25.88 E-value=55 Score=29.76 Aligned_cols=30 Identities=13% Similarity=-0.020 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
-+.++++++++.|+++|+.||.|-++-+..
T Consensus 66 Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 66 GNAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 357889999999999999999999876544
No 343
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=25.88 E-value=39 Score=23.80 Aligned_cols=21 Identities=19% Similarity=0.129 Sum_probs=18.1
Q ss_pred HHHHHHHHHHcCCEEEEcccc
Q 015768 186 LKRISDLCKAAGSWLVVDNTY 206 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~ 206 (400)
-.+|.+++++||++++.|..-
T Consensus 44 A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCeEEECHHH
Confidence 678888999999999999753
No 344
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=25.83 E-value=3.3e+02 Score=23.71 Aligned_cols=104 Identities=15% Similarity=0.057 Sum_probs=55.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCC--CEEEEe--CCCccchh--HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLCDAG--DSVVMF--APYYFNSY--MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~~~g--d~vlv~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
++...+++|-|.+.....++....+.| -+|++. .|.+.+.. .-+...|+.+..+ +- ..+...++
T Consensus 119 I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli-~D---------sa~~~~m~ 188 (315)
T 3ecs_A 119 IKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVV-LD---------AAVGYIME 188 (315)
T ss_dssp CCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEE-CG---------GGHHHHGG
T ss_pred cCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEE-eh---------hHHHHHHH
Confidence 345678888776666666666655444 355554 33333332 3345678887777 21 12222333
Q ss_pred cCCCCeEEEEeC-CCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 161 TKPTPKLVSVVN-PGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 161 ~~~~~~~v~l~~-p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
. +..|++.. .-..-|.+.++----.++-+|+.+|+++++=
T Consensus 189 ~---vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~ 229 (315)
T 3ecs_A 189 K---ADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVV 229 (315)
T ss_dssp G---CSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEE
T ss_pred h---CCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEE
Confidence 2 24444432 1123344433332456677888999998874
No 345
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=25.83 E-value=2.5e+02 Score=22.26 Aligned_cols=93 Identities=10% Similarity=0.008 Sum_probs=45.3
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCC-HHHHHHhhccCCCCeEEEE
Q 015768 92 VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPD-ADWLEKTLETKPTPKLVSV 170 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~e~l~~~l~~~~~~~~v~l 170 (400)
|++|.++...=..++..|.+.|.+|.+..-.-..... ..+++++.. ++. | .+.+++.+.. +.+|+-
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~~~~~~~~-D~~------d~~~~~~~~~~~---~d~vi~ 69 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---YNNVKAVHF-DVD------WTPEEMAKQLHG---MDAIIN 69 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---CTTEEEEEC-CTT------SCHHHHHTTTTT---CSEEEE
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---cCCceEEEe-ccc------CCHHHHHHHHcC---CCEEEE
Confidence 5566543333345555666778776655432211111 134555444 222 5 7788887763 356654
Q ss_pred eCC-CCCCccCCCHHHHHHHHHHHHHcC
Q 015768 171 VNP-GNPSGTYIPERLLKRISDLCKAAG 197 (400)
Q Consensus 171 ~~p-~nptG~~~~~~~l~~i~~l~~~~~ 197 (400)
+.. ..+.-.-....-...+.+.|++.+
T Consensus 70 ~ag~~~~~~~~~n~~~~~~l~~a~~~~~ 97 (219)
T 3dqp_A 70 VSGSGGKSLLKVDLYGAVKLMQAAEKAE 97 (219)
T ss_dssp CCCCTTSSCCCCCCHHHHHHHHHHHHTT
T ss_pred CCcCCCCCcEeEeHHHHHHHHHHHHHhC
Confidence 432 222212223333556666666543
No 346
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=25.62 E-value=90 Score=27.38 Aligned_cols=74 Identities=12% Similarity=0.043 Sum_probs=50.5
Q ss_pred CccchhHHHHh-cCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEE
Q 015768 122 YYFNSYMSFQM-TGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWL 200 (400)
Q Consensus 122 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~l 200 (400)
.|..+.+.+.. -.++.+.+ ..... ...+...++++.+ |-|+++-|- ..+.++.+++.++++++|+.+
T Consensus 68 ~~~~~~~ll~~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKP~-----a~~~~e~~~l~~~a~~~g~~~ 135 (330)
T 4ew6_A 68 SYTTIEAMLDAEPSIDAVSL-CMPPQ---YRYEAAYKALVAG---KHVFLEKPP-----GATLSEVADLEALANKQGASL 135 (330)
T ss_dssp EESSHHHHHHHCTTCCEEEE-CSCHH---HHHHHHHHHHHTT---CEEEECSSS-----CSSHHHHHHHHHHHHHHTCCE
T ss_pred ccCCHHHHHhCCCCCCEEEE-eCCcH---HHHHHHHHHHHcC---CcEEEeCCC-----CCCHHHHHHHHHHHHhcCCeE
Confidence 35667777777 67787777 44322 2455666666654 677766542 347888999999999999988
Q ss_pred EEccccc
Q 015768 201 VVDNTYE 207 (400)
Q Consensus 201 i~D~a~~ 207 (400)
.+-..+.
T Consensus 136 ~v~~~~r 142 (330)
T 4ew6_A 136 FASWHSR 142 (330)
T ss_dssp EECCGGG
T ss_pred EEEehhh
Confidence 8755544
No 347
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=25.58 E-value=2.7e+02 Score=22.58 Aligned_cols=94 Identities=16% Similarity=0.203 Sum_probs=43.4
Q ss_pred EEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----cCCCCe
Q 015768 92 VMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----TKPTPK 166 (400)
Q Consensus 92 i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~~~~~~ 166 (400)
+++|. ++.++- .+...|.+.|.+|++..-.-.......+..+..+..+ ..|-. |.+.+++.++ ....+.
T Consensus 6 vlVTG-as~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 6 IIVTG-AGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGI-VADLA----HHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEE-ECCTT----SHHHHHHHHHHHHHHHCSCS
T ss_pred EEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEE-ECCCC----CHHHHHHHHHHHHHhcCCCc
Confidence 44454 444444 4445667778888776544333333333333334444 44322 4555555544 112245
Q ss_pred EEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 167 LVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 167 ~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
.++-.....+.+. -.+.+++++..+
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 6554433222222 246666666554
No 348
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=25.56 E-value=99 Score=25.86 Aligned_cols=51 Identities=20% Similarity=0.390 Sum_probs=31.9
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCC----CccCCCHHH----HHHHHHHHHHcCCEEEEccc
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNP----SGTYIPERL----LKRISDLCKAAGSWLVVDNT 205 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~np----tG~~~~~~~----l~~i~~l~~~~~~~li~D~a 205 (400)
++.+++++... +++|-+-..+.+ .|. ++.++ .+++.++|+++++.+|+++-
T Consensus 46 ~~~~~~al~~G--v~~vqlR~K~~~~~~~~~~-l~~~~~~~~a~~l~~l~~~~~~~liInd~ 104 (243)
T 3o63_A 46 AQFAEAALAGG--VDIIQLRDKGSPGELRFGP-LQARDELAACEILADAAHRYGALFAVNDR 104 (243)
T ss_dssp HHHHHHHHHTT--CSEEEECCTTCHHHHHHCS-CCHHHHHHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHHCC--CCEEEEccCCCCccccccC-CCHHHHHHHHHHHHHHHHhhCCEEEEeCH
Confidence 46667777654 477776655422 111 22222 46788899999999999654
No 349
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=25.50 E-value=71 Score=27.54 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=33.9
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
|.+++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+.
T Consensus 10 Pf~~dg-~iD~~~l~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 10 PFDKQG-KVNVDALKTHAKNLLEKGIDAIFVN-GTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp CBCTTS-CBCHHHHHHHHHHHHHTTCCEEEET-STTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCCCC-CcCHHHHHHHHHHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHH
Confidence 455554 678888888765 11224666544 444455678888888888877654
No 350
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=25.47 E-value=1.4e+02 Score=26.28 Aligned_cols=72 Identities=11% Similarity=0.093 Sum_probs=41.3
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+....++.+.+ ...+. ...+...++++.+ |-|+++-|- ..+.++.++|.++++++|+.+.+
T Consensus 71 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKPl-----a~~~~ea~~l~~~a~~~g~~~~v 138 (340)
T 1zh8_A 71 FDSYEELLESGLVDAVDL-TLPVE---LNLPFIEKALRKG---VHVICEKPI-----STDVETGKKVVELSEKSEKTVYI 138 (340)
T ss_dssp ESCHHHHHHSSCCSEEEE-CCCGG---GHHHHHHHHHHTT---CEEEEESSS-----SSSHHHHHHHHHHHHHCSSCEEE
T ss_pred cCCHHHHhcCCCCCEEEE-eCCch---HHHHHHHHHHHCC---CcEEEeCCC-----CCCHHHHHHHHHHHHHcCCeEEE
Confidence 444555555555666655 33221 1344555555543 566665442 24677788888888888887776
Q ss_pred cccc
Q 015768 203 DNTY 206 (400)
Q Consensus 203 D~a~ 206 (400)
--.+
T Consensus 139 ~~~~ 142 (340)
T 1zh8_A 139 AENF 142 (340)
T ss_dssp ECGG
T ss_pred Eecc
Confidence 5444
No 351
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=25.39 E-value=43 Score=23.34 Aligned_cols=22 Identities=14% Similarity=0.054 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCEEEEccccc
Q 015768 186 LKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~ 207 (400)
-.+|.++++++|++++.|-.-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCEEECHHHH
Confidence 6788889999999999987533
No 352
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=25.21 E-value=62 Score=30.72 Aligned_cols=31 Identities=13% Similarity=0.103 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccccC
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMYD 212 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~ 212 (400)
+.++++++++.|+++|+.||.|-++-+...+
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~ 121 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMNRG 121 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcCCC
Confidence 4788999999999999999999998765543
No 353
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=25.20 E-value=1.5e+02 Score=25.75 Aligned_cols=71 Identities=13% Similarity=0.042 Sum_probs=34.5
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+....++.+.+ ...+. ...+...++++.+ |-|++.-|- ..+.++.++|.++++++|+.+.+
T Consensus 55 ~~~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---khVl~EKP~-----a~~~~e~~~l~~~a~~~g~~~~v 122 (336)
T 2p2s_A 55 AASAEQLITDASIDLIAC-AVIPC---DRAELALRTLDAG---KDFFTAKPP-----LTTLEQLDAVQRRVAETGRKFAV 122 (336)
T ss_dssp CSCHHHHHTCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEECSSC-----CSCHHHHHHHHHHHHHHCCCEEE
T ss_pred cCCHHHHhhCCCCCEEEE-eCChh---hHHHHHHHHHHCC---CcEEEeCCC-----CCCHHHHHHHHHHHHHcCCEEEE
Confidence 334444444444555555 22211 1334444444433 444444331 23556677777777777766665
Q ss_pred ccc
Q 015768 203 DNT 205 (400)
Q Consensus 203 D~a 205 (400)
--.
T Consensus 123 ~~~ 125 (336)
T 2p2s_A 123 YFN 125 (336)
T ss_dssp CCT
T ss_pred eec
Confidence 433
No 354
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=25.12 E-value=1.6e+02 Score=20.99 Aligned_cols=43 Identities=16% Similarity=0.123 Sum_probs=29.1
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
.+...+.++.+. .++|++.+ .+ |.+-...|..+|++++++++.
T Consensus 26 ~~~v~kai~~gk-a~lViiA~------D~-~~~~~~~l~~~c~~~~Vp~~~ 68 (110)
T 3cpq_A 26 SKRTIKFVKHGE-GKLVVLAG------NI-PKDLEEDVKYYAKLSNIPVYQ 68 (110)
T ss_dssp HHHHHHHHHTTC-CSEEEECT------TC-BHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCC-ceEEEEeC------CC-CHHHHHHHHHHHHHcCCCEEE
Confidence 345566665443 47777652 22 567788999999999998653
No 355
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=25.05 E-value=1.2e+02 Score=26.58 Aligned_cols=71 Identities=17% Similarity=0.095 Sum_probs=40.6
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
..+.+.+....++.+.+ ..... ...+...++++.+ +.|+++-|- ..+.++.+++.++++++|+.+.+-
T Consensus 55 ~~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---k~Vl~EKP~-----a~~~~e~~~l~~~a~~~g~~~~v~ 122 (345)
T 3f4l_A 55 SDLDEVLNDPDVKLVVV-CTHAD---SHFEYAKRALEAG---KNVLVEKPF-----TPTLAQAKELFALAKSKGLTVTPY 122 (345)
T ss_dssp SCTHHHHTCTTEEEEEE-CSCGG---GHHHHHHHHHHTT---CEEEECSSS-----CSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCHHHHhcCCCCCEEEE-cCChH---HHHHHHHHHHHcC---CcEEEeCCC-----CCCHHHHHHHHHHHHHcCCeEEEE
Confidence 34445555445666666 33222 2345555555543 556655442 246677888888888888877764
Q ss_pred ccc
Q 015768 204 NTY 206 (400)
Q Consensus 204 ~a~ 206 (400)
-.+
T Consensus 123 ~~~ 125 (345)
T 3f4l_A 123 QNR 125 (345)
T ss_dssp CGG
T ss_pred ech
Confidence 443
No 356
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=25.02 E-value=2.3e+02 Score=23.28 Aligned_cols=71 Identities=7% Similarity=0.018 Sum_probs=43.5
Q ss_pred hhHHHHhcCcEEEEeccCCCCCCC----CCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 126 SYMSFQMTGVTHILVGPCSSKTLH----PDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 126 ~~~~~~~~g~~~~~~~~~~~~~~~----~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
....++..|...+.+ ..+..+|. .+.+.+.+.+.....+..|++.+...+ ...+.+.+|++..++.|.-++
T Consensus 150 ~~~~l~~~G~~~v~w-~~d~~Dw~~~~~~~~~~~~~~v~~~~~~g~Iil~Hd~~~----~t~~aL~~ii~~l~~~Gy~fv 224 (240)
T 1ny1_A 150 VLKETKRLGYQTVFW-SVAFVDWKINNQKGKKYAYDHMIKQAHPGAIYLLHTVSR----DNAEALDDAITDLKKQGYTFK 224 (240)
T ss_dssp HHHHHHHTTCEEBCC-SBCCSCCCGGGCCCHHHHHHHHHHTCCTTEEEEECSCST----THHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHcCCEEEEC-cccccccCCcCCCCHHHHHHHHHhCCCCCeEEEEcCCCh----hHHHHHHHHHHHHHHCCCEEE
Confidence 345677889887766 55554453 234444444332223467777776433 245778999998888886554
No 357
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=24.96 E-value=51 Score=30.79 Aligned_cols=29 Identities=17% Similarity=0.014 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
+.++++++++.|+++|+.||.|-+.-+..
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 57889999999999999999999886553
No 358
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=24.83 E-value=85 Score=27.65 Aligned_cols=9 Identities=33% Similarity=0.420 Sum_probs=4.4
Q ss_pred CEEEEeCCC
Q 015768 114 DSVVMFAPY 122 (400)
Q Consensus 114 d~vlv~~p~ 122 (400)
|.|++..|.
T Consensus 88 DaV~I~tP~ 96 (350)
T 4had_A 88 DAVYIPLPT 96 (350)
T ss_dssp SEEEECSCG
T ss_pred CEEEEeCCC
Confidence 555554444
No 359
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=24.82 E-value=2.7e+02 Score=22.34 Aligned_cols=95 Identities=7% Similarity=-0.031 Sum_probs=46.2
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCC-CCeEEEE
Q 015768 92 VMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKP-TPKLVSV 170 (400)
Q Consensus 92 i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~-~~~~v~l 170 (400)
+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|- -+.+.+++.+..-. ....++-
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~----~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYR-ARDL----ASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEE-ECCT----TCHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeE-eecC----CCHHHHHHHHHHHhhcCCEEEE
Confidence 4555444333344555666778777776544333334444444444444 4432 26677777765321 1244443
Q ss_pred eCCCCCCcc--CCCHHHHHHHHH
Q 015768 171 VNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 171 ~~p~nptG~--~~~~~~l~~i~~ 191 (400)
+....+.+. -.+.+++++..+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHH
Confidence 322222222 246666666554
No 360
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.78 E-value=51 Score=30.79 Aligned_cols=30 Identities=7% Similarity=-0.160 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
-+.++++++++.|+++|+.||.|-+.-+..
T Consensus 76 Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 76 GTKSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 357889999999999999999999876553
No 361
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=24.52 E-value=52 Score=31.11 Aligned_cols=30 Identities=13% Similarity=0.020 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
-+.++++++++.|+++|+.||.|-+.-+..
T Consensus 79 Gt~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 79 GTKAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 357889999999999999999999876553
No 362
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=24.51 E-value=3.6e+02 Score=23.73 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=43.2
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+....++++.+ ..... ...+...++++.+ |-|+++-| ...+.++.+++.++++++|+.+.+
T Consensus 56 ~~~~~~ll~~~~~D~V~i-~tp~~---~H~~~~~~al~aG---k~Vl~EKP-----la~~~~e~~~l~~~a~~~g~~~~v 123 (364)
T 3e82_A 56 IASPEAAVQHPDVDLVVI-ASPNA---THAPLARLALNAG---KHVVVDKP-----FTLDMQEARELIALAEEKQRLLSV 123 (364)
T ss_dssp ESCHHHHHTCTTCSEEEE-CSCGG---GHHHHHHHHHHTT---CEEEECSC-----SCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred ECCHHHHhcCCCCCEEEE-eCChH---HHHHHHHHHHHCC---CcEEEeCC-----CcCCHHHHHHHHHHHHHhCCeEEE
Confidence 445566665556666666 33221 2455566666544 55665544 234677788888888888888876
Q ss_pred ccc
Q 015768 203 DNT 205 (400)
Q Consensus 203 D~a 205 (400)
.-.
T Consensus 124 ~~~ 126 (364)
T 3e82_A 124 FHN 126 (364)
T ss_dssp CCC
T ss_pred Eee
Confidence 443
No 363
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=24.50 E-value=87 Score=29.56 Aligned_cols=106 Identities=7% Similarity=0.081 Sum_probs=59.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhc----CC--CC-----EEEEeCCCc-------------cc------hhHHHHhcCcE
Q 015768 87 LYKSSVMVTAGANQAFVNIVLTLC----DA--GD-----SVVMFAPYY-------------FN------SYMSFQMTGVT 136 (400)
Q Consensus 87 ~~~~~i~~~~g~t~a~~~~~~~l~----~~--gd-----~vlv~~p~~-------------~~------~~~~~~~~g~~ 136 (400)
++++.|.++.++..++...+..|. .. |. ..+...|.| .+ +.+.+...+.+
T Consensus 98 v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~KlN 177 (507)
T 2gjx_A 98 INDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLN 177 (507)
T ss_dssp ESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCC
T ss_pred EeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCCc
Confidence 345678888777777777776653 11 21 123444544 11 11233445566
Q ss_pred EEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 137 HILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 137 ~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+..+--.|+++|.+..+.+.++-... ...|.|-.++.+++++|.+.|+++||-||-
T Consensus 178 ~lh~HltDdq~wr~ei~~~P~Lt~~G----------a~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 178 VFHWHLVDDPSFPYESFTFPELMRKG----------SYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp EEEEECCCSSCCCBCCSSCTHHHHHH----------SSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEecccCeeeeccccchhhhcc----------ccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 55541345556654432222211100 012445678999999999999999999885
No 364
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=24.47 E-value=1.8e+02 Score=29.43 Aligned_cols=77 Identities=16% Similarity=0.232 Sum_probs=47.9
Q ss_pred eCCCccchhHHHHhc-CcEEEEeccCCCCCCCCCHHHHHHhhc-cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 119 FAPYYFNSYMSFQMT-GVTHILVGPCSSKTLHPDADWLEKTLE-TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 119 ~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~e~l~~~l~-~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
.-|+|.++.++.... ++++..+ -+... .-.+.++++++ ... +++++..... +....+++.++|+++
T Consensus 549 Gvp~y~sv~ea~~~~p~~DlaVI-~vP~~---~v~~av~ea~~~~Gv--k~~Viis~Gf------~e~~~~~l~~~A~~~ 616 (829)
T 3pff_A 549 LIPVFKNMADAMRKHPEVDVLIN-FASLR---SAYDSTMETMNYAQI--RTIAIIAEGI------PEALTRKLIKKADQK 616 (829)
T ss_dssp EEEEESSHHHHHHHCTTCCEEEE-CCCTT---THHHHHHHHTTSTTC--CEEEECCSCC------CHHHHHHHHHHHHHH
T ss_pred CcccCCcHHHHhhccCCCcEEEE-eCCHH---HHHHHHHHHHhhCCC--CEEEEeCCCC------CHHHHHHHHHHHHHc
Confidence 358888888877653 3444433 22222 24677888876 443 6665543322 334568899999999
Q ss_pred CCEEEEccccc
Q 015768 197 GSWLVVDNTYE 207 (400)
Q Consensus 197 ~~~li~D~a~~ 207 (400)
|+.+|==++.+
T Consensus 617 g~rliGPNc~G 627 (829)
T 3pff_A 617 GVTIIGPATVG 627 (829)
T ss_dssp TCEEECSSCCC
T ss_pred CCEEEcCCCcc
Confidence 99988544443
No 365
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=24.43 E-value=1.5e+02 Score=25.87 Aligned_cols=68 Identities=13% Similarity=0.039 Sum_probs=33.2
Q ss_pred cchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEc
Q 015768 124 FNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 124 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D 203 (400)
..+.+.+....++++.+ ..... ...+....+++.+ +-|+++-|- ..+.++.+++.++++++|+.+.+-
T Consensus 57 ~~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---k~Vl~EKP~-----a~~~~e~~~l~~~a~~~~~~~~v~ 124 (329)
T 3evn_A 57 DKLEDMLADESIDVIYV-ATINQ---DHYKVAKAALLAG---KHVLVEKPF-----TLTYDQANELFALAESCNLFLMEA 124 (329)
T ss_dssp SCHHHHHTCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEEESSC-----CSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHhcCCCCCEEEE-CCCcH---HHHHHHHHHHHCC---CeEEEccCC-----cCCHHHHHHHHHHHHHcCCEEEEE
Confidence 34444444334555554 22211 1334444444433 445555432 235566677777777777666553
No 366
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=24.41 E-value=43 Score=23.62 Aligned_cols=22 Identities=14% Similarity=0.169 Sum_probs=18.3
Q ss_pred HHHHHHHHHHcCCEEEEccccc
Q 015768 186 LKRISDLCKAAGSWLVVDNTYE 207 (400)
Q Consensus 186 l~~i~~l~~~~~~~li~D~a~~ 207 (400)
-.+|.++++++|++++.|-.-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHcCCCeecCHHHH
Confidence 6788889999999999987533
No 367
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=24.37 E-value=35 Score=29.05 Aligned_cols=62 Identities=11% Similarity=-0.041 Sum_probs=37.3
Q ss_pred CCCEEEEeCCCcc--chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 112 AGDSVVMFAPYYF--NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 112 ~gd~vlv~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
-|-+|+++.|.-. .+...++..|++++.+ |.-.-....+.+.+.+.+..-.....|++++++
T Consensus 13 ~g~~IlvTRp~~~a~~l~~~L~~~G~~~~~~-P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~n 76 (269)
T 3re1_A 13 SAWRLLLTRPAEESAALARVLADAGIFSSSL-PLLETEPLPLTPAQRSIIFELLNYSAVIVVSKP 76 (269)
T ss_dssp CCCEEEECSCHHHHHHHHHHHHTTTCEEEEC-CCCEEEECCCHHHHHHHHHTGGGSSEEEECSHH
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCCCCEEEc-CCEEEecCCCcHHHHHHHHhccCCCEEEEECHH
Confidence 3678999988763 3556778889998888 764322122344555554421224677776543
No 368
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=24.35 E-value=3.3e+02 Score=23.12 Aligned_cols=136 Identities=15% Similarity=0.082 Sum_probs=69.9
Q ss_pred cHHHHHHHHHhhcCCC-----CCCCCCCCCcHHHHHHHHHHHHhhcCCCCCcEEEeCC------hHH----HHHHHHHHh
Q 015768 45 PKMAMEKVKELVWDPS-----ISKYGADEGLPELRDALVKKLNQENKLYKSSVMVTAG------ANQ----AFVNIVLTL 109 (400)
Q Consensus 45 ~~~v~~a~~~~~~~~~-----~~~y~~~~g~~~~~~~~a~~l~~~~~~~~~~i~~~~g------~t~----a~~~~~~~l 109 (400)
..++.+.+..+++.+. ...|+ . ++.+.+.+++ .+.+.+++++++= +.+ +++..+..|
T Consensus 34 ~~~~~~~v~~Al~~G~~~~DTA~~Yg----~---E~~vG~al~~-~~~~R~~~~I~TK~~~~~~~~~~i~~~~~~SL~rL 105 (288)
T 4f40_A 34 GEVTENAVKWALCAGYRHIDTAAIYK----N---EESVGAGLRA-SGVPREDVFITTKLWNTEQGYESTLAAFEESRQKL 105 (288)
T ss_dssp THHHHHHHHHHHHTTCCEEECCGGGT----C---HHHHHHHHHH-HTCCGGGCEEEEEECGGGCSHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCeEECccccc----C---HHHHHHHHHh-cCCChhhEEEEEecCCCcCCHHHHHHHHHHHHHHh
Confidence 4677788888887652 12343 2 3445555543 2555677766532 112 233333333
Q ss_pred c-CCCCEEEEeCCCcc--------chh------HHHHhcC-cEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCC
Q 015768 110 C-DAGDSVVMFAPYYF--------NSY------MSFQMTG-VTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNP 173 (400)
Q Consensus 110 ~-~~gd~vlv~~p~~~--------~~~------~~~~~~g-~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p 173 (400)
- .-=|-.++..|... ... .-++..| ++.+-++ +.+.+.+++++.... .+..+....
T Consensus 106 g~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvS-------n~~~~~l~~~~~~~~-~~~~~~Q~~ 177 (288)
T 4f40_A 106 GVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVS-------NFHIHHLEDVLAMCT-VTPMVNQVE 177 (288)
T ss_dssp TCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEEEEEEE-------SCCHHHHHHHHTTCS-SCCCEEEEE
T ss_pred CCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCccEEEec-------cCCHHHHHHHHHhCC-CCCeEEecc
Confidence 2 12266778777642 111 2223445 3444441 346778888776321 122233323
Q ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 174 GNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 174 ~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
.||.-. . .++.+.|+++|+-++.
T Consensus 178 ~~~~~~--~----~~l~~~~~~~gi~v~a 200 (288)
T 4f40_A 178 LHPLNN--Q----ADLRAFCDAKQIKVEA 200 (288)
T ss_dssp CBTTBC--C----HHHHHHHHHTTCEEEE
T ss_pred CccccC--C----HHHHHHHHHCCCEEEE
Confidence 344321 1 4688899999998875
No 369
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=24.26 E-value=3.5e+02 Score=23.40 Aligned_cols=76 Identities=11% Similarity=0.052 Sum_probs=43.4
Q ss_pred CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHH
Q 015768 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRI 189 (400)
Q Consensus 112 ~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i 189 (400)
++..+++..+ .+.-.++.+|++.+.+ .....+..++...|.++++ ....+++|+.. ++. +..-.+.|
T Consensus 189 ~~~~~v~~H~---af~Yfa~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e-~~~------~~~~~~~i 257 (312)
T 2o1e_A 189 EKKEFITQHT---AFGYLAKEYGLKQVPI-AGLSPDQEPSAASLAKLKTYAKEHNVKVIYFE-EIA------SSKVADTL 257 (312)
T ss_dssp SCCEEEESSC---TTHHHHHHTTCEEEEC-SSCCSSSCCCHHHHHHHHHHTTSSCCCEEECS-SCC------CHHHHHHH
T ss_pred CCCEEEEECC---chHHHHHHCCCeEEEe-eccCCCCCCCHHHHHHHHHHHHHcCCCEEEEe-CCC------ChHHHHHH
Confidence 4556777655 4455568899987766 3222234567777776655 23336777654 332 22223443
Q ss_pred HHHHHHcCCEEE
Q 015768 190 SDLCKAAGSWLV 201 (400)
Q Consensus 190 ~~l~~~~~~~li 201 (400)
+++.|+.++
T Consensus 258 ---a~e~g~~v~ 266 (312)
T 2o1e_A 258 ---ASEIGAKTE 266 (312)
T ss_dssp ---HHHTCCEEE
T ss_pred ---HHHhCCcEE
Confidence 557787764
No 370
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.08 E-value=1.3e+02 Score=24.06 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=31.8
Q ss_pred CHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 151 DADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 151 ~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
+.+.|+++++... ..+++. +|.+.. +.++.+.++++|-.+++
T Consensus 18 ~~~~l~~al~s~~--~~ifll-----~g~i~~---l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILELDL--TYMVML-----ETHVAQ---LKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTTSSC--CEEEEC-----SEETTT---HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcCCC--CEEEEe-----cCcHHH---HHHHHHHHHHcCCeEEE
Confidence 6788999887554 777765 455666 99999999999866665
No 371
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=24.04 E-value=1.8e+02 Score=23.72 Aligned_cols=85 Identities=12% Similarity=0.112 Sum_probs=46.0
Q ss_pred EEeCChHHHHHHHHHHhcCCCC--EE--EEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCH----HHHHHhhccCCC
Q 015768 93 MVTAGANQAFVNIVLTLCDAGD--SV--VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA----DWLEKTLETKPT 164 (400)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~~~gd--~v--lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----e~l~~~l~~~~~ 164 (400)
++.+|+..-...++.++.+.+- .| +++++.-......++..|+.+..+++.+ +. +. +++.+.++...
T Consensus 6 vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~---~~-~r~~~~~~~~~~l~~~~- 80 (216)
T 2ywr_A 6 VLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKE---FP-SKKEFEERMALELKKKG- 80 (216)
T ss_dssp EEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGG---SS-SHHHHHHHHHHHHHHTT-
T ss_pred EEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCccc---cc-chhhhhHHHHHHHHhcC-
Confidence 4555555556677777765542 22 4555544445667788898877662221 11 21 23344454332
Q ss_pred CeEEEEeCCCCCCccCCCHHHH
Q 015768 165 PKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l 186 (400)
+.++++.. .|.+++.+-+
T Consensus 81 ~Dliv~a~----y~~il~~~~l 98 (216)
T 2ywr_A 81 VELVVLAG----FMRILSHNFL 98 (216)
T ss_dssp CCEEEESS----CCSCCCHHHH
T ss_pred CCEEEEeC----chhhCCHHHH
Confidence 57777653 4677774433
No 372
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=24.01 E-value=1.4e+02 Score=26.33 Aligned_cols=21 Identities=10% Similarity=0.060 Sum_probs=12.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEE
Q 015768 182 PERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~ 202 (400)
+.++.+++.++|+++|+.+.+
T Consensus 101 ~~~e~~~l~~~a~~~g~~~~v 121 (349)
T 3i23_A 101 TLEHAEELFALGQEKGVVVMP 121 (349)
T ss_dssp SHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEE
Confidence 455566666666666665554
No 373
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=23.78 E-value=55 Score=30.59 Aligned_cols=29 Identities=14% Similarity=-0.072 Sum_probs=25.5
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
-+.++++++++.|+++|+.||.|-+.-+.
T Consensus 80 Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 80 GTRSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 35788999999999999999999987654
No 374
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=23.77 E-value=91 Score=26.84 Aligned_cols=58 Identities=12% Similarity=0.123 Sum_probs=36.9
Q ss_pred cCCCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PCSSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|.+ +| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++++|+
T Consensus 12 Pf~-dg-~iD~~~l~~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 12 PFK-NK-EVDFDGLEENINFLIENGVSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp CEE-TT-EECHHHHHHHHHHHHHTTCSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcC-CC-CcCHHHHHHHHHHHHHCCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 444 44 678888888766 11224666654 444455678888888888877653 366654
No 375
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=23.75 E-value=2.3e+02 Score=24.21 Aligned_cols=72 Identities=14% Similarity=0.149 Sum_probs=48.2
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+....++++.+ -.... ...+...++++.+ |-|++.-| ...+.++.++|.++++++|+.+.+
T Consensus 54 ~~~~~ell~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKP-----la~~~~ea~~l~~~a~~~g~~~~~ 121 (294)
T 1lc0_A 54 QISLEDALRSQEIDVAYI-CSESS---SHEDYIRQFLQAG---KHVLVEYP-----MTLSFAAAQELWELAAQKGRVLHE 121 (294)
T ss_dssp BCCHHHHHHCSSEEEEEE-CSCGG---GHHHHHHHHHHTT---CEEEEESC-----SCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHhcCCCCCEEEE-eCCcH---hHHHHHHHHHHCC---CcEEEeCC-----CCCCHHHHHHHHHHHHHhCCEEEE
Confidence 345666676667888877 44322 2466666777654 56666644 234788899999999999988776
Q ss_pred cccc
Q 015768 203 DNTY 206 (400)
Q Consensus 203 D~a~ 206 (400)
--.+
T Consensus 122 ~~~~ 125 (294)
T 1lc0_A 122 EHVE 125 (294)
T ss_dssp ECGG
T ss_pred EEhH
Confidence 4443
No 376
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=23.71 E-value=69 Score=28.05 Aligned_cols=59 Identities=10% Similarity=0.032 Sum_probs=38.2
Q ss_pred cC-CCCCCCCCHHHHHHhhc--cCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc---CCEEEE
Q 015768 142 PC-SSKTLHPDADWLEKTLE--TKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA---GSWLVV 202 (400)
Q Consensus 142 ~~-~~~~~~~~~e~l~~~l~--~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~---~~~li~ 202 (400)
|. +++| .+|.+.++++++ -..+...++++ .++--+..++.+|..++.+.+.+. ++++|+
T Consensus 22 PF~~~dg-~iD~~~l~~lv~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 22 PFLEGTR-EIDWKGLDDNVEFLLQNGIEVIVPN-GNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp CBCTTTC-CBCHHHHHHHHHHHHHTTCSEECTT-SGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred cccCCCC-CCCHHHHHHHHHHHHHcCCCEEEEC-cccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 55 5554 789988888776 11224666543 344445568999998888877653 466665
No 377
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=23.52 E-value=33 Score=28.82 Aligned_cols=61 Identities=15% Similarity=-0.003 Sum_probs=36.6
Q ss_pred CCEEEEeCCCcc--chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 113 GDSVVMFAPYYF--NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 113 gd~vlv~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
|-+|+++.|... .+...++..|++++.+ |.-.-....+.+.+.+.+..-.....|++++++
T Consensus 6 g~~vlvtRp~~~~~~l~~~L~~~G~~~~~~-P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~ 68 (254)
T 4es6_A 6 GWRLLLTRPDEECAALAASLGEAGVHSSSL-PLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKP 68 (254)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCEEEEC-CSCEEEECCCCHHHHHHHHTGGGCSEEEECSHH
T ss_pred CCEEEEeCChHHhHHHHHHHHHCCCcEEEe-CCEEEeeCcChHHHHHHHHhccCCCEEEEECHH
Confidence 678999988653 4567788899998888 754322112334555544321224677776543
No 378
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=23.39 E-value=1.3e+02 Score=26.76 Aligned_cols=71 Identities=18% Similarity=0.116 Sum_probs=38.1
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+..-.++++.+ ..... ...+...++++.+ |-|+++-| ...+.++.++|.++|++.|+.+.+
T Consensus 54 ~~~~~~ll~~~~vD~V~i-~tp~~---~H~~~~~~al~aG---khVl~EKP-----~a~~~~ea~~l~~~a~~~g~~~~v 121 (362)
T 3fhl_A 54 VRSFKELTEDPEIDLIVV-NTPDN---THYEYAGMALEAG---KNVVVEKP-----FTSTTKQGEELIALAKKKGLMLSV 121 (362)
T ss_dssp ESCSHHHHTCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEEESS-----CCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCHHHHhcCCCCCEEEE-eCChH---HHHHHHHHHHHCC---CeEEEecC-----CCCCHHHHHHHHHHHHHcCCEEEE
Confidence 334445555445555555 33221 1344455555443 45555544 224566777777777777777766
Q ss_pred ccc
Q 015768 203 DNT 205 (400)
Q Consensus 203 D~a 205 (400)
--.
T Consensus 122 ~~~ 124 (362)
T 3fhl_A 122 YQN 124 (362)
T ss_dssp ECG
T ss_pred Eec
Confidence 443
No 379
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=23.36 E-value=99 Score=26.88 Aligned_cols=78 Identities=15% Similarity=0.187 Sum_probs=45.8
Q ss_pred CCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc-CC
Q 015768 120 APYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA-GS 198 (400)
Q Consensus 120 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-~~ 198 (400)
.|+|++..++.+....++..+ -.++. .-.+.++++++.+. +.+++..+ |. +.++..++.+.++++ |+
T Consensus 57 ~~vy~sl~el~~~~~vD~avI-~vP~~---~~~~~~~e~i~~Gi--~~iv~~t~----G~--~~~~~~~l~~~a~~~~gi 124 (305)
T 2fp4_A 57 LPVFNTVKEAKEQTGATASVI-YVPPP---FAAAAINEAIDAEV--PLVVCITE----GI--PQQDMVRVKHRLLRQGKT 124 (305)
T ss_dssp EEEESSHHHHHHHHCCCEEEE-CCCHH---HHHHHHHHHHHTTC--SEEEECCC----CC--CHHHHHHHHHHHTTCSSC
T ss_pred eeeechHHHhhhcCCCCEEEE-ecCHH---HHHHHHHHHHHCCC--CEEEEECC----CC--ChHHHHHHHHHHHhcCCc
Confidence 344555666665335554444 22222 13456666666544 66544333 32 445567899999999 99
Q ss_pred EEEEccccccc
Q 015768 199 WLVVDNTYEYF 209 (400)
Q Consensus 199 ~li~D~a~~~~ 209 (400)
.++-+.+.+..
T Consensus 125 ~liGPnc~Gii 135 (305)
T 2fp4_A 125 RLIGPNCPGVI 135 (305)
T ss_dssp EEECSSSCEEE
T ss_pred EEEeCCCCeEe
Confidence 99877776643
No 380
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=23.30 E-value=61 Score=30.18 Aligned_cols=30 Identities=27% Similarity=0.317 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMY 211 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~ 211 (400)
+.++++++++.|+++|+.||.|-+.-+...
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVANHMGY 125 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccCCC
Confidence 478899999999999999999998865543
No 381
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=23.04 E-value=73 Score=29.77 Aligned_cols=28 Identities=7% Similarity=0.115 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
+.++++++++.|+++|+.||.|-++-+.
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 107 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHT 107 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 4788999999999999999999987543
No 382
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=22.90 E-value=96 Score=27.86 Aligned_cols=10 Identities=10% Similarity=0.046 Sum_probs=5.0
Q ss_pred CCEEEEeCCC
Q 015768 113 GDSVVMFAPY 122 (400)
Q Consensus 113 gd~vlv~~p~ 122 (400)
-|.|.|..|.
T Consensus 67 ~D~v~i~~p~ 76 (372)
T 4gmf_A 67 PDIACIVVRS 76 (372)
T ss_dssp CSEEEECCC-
T ss_pred CCEEEEECCC
Confidence 3666655544
No 383
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=22.75 E-value=69 Score=29.76 Aligned_cols=29 Identities=14% Similarity=0.319 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
+.++++++++.|+++|+.||.|-++-+..
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 46889999999999999999998876443
No 384
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=22.42 E-value=1.1e+02 Score=27.31 Aligned_cols=73 Identities=14% Similarity=0.114 Sum_probs=41.8
Q ss_pred CccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEE
Q 015768 122 YYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLV 201 (400)
Q Consensus 122 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li 201 (400)
.|..+.+.+..-.++.+.+ ..... ...+...++++.+ |-|+++-|- ..+.++.++|.++++++|+.+.
T Consensus 76 ~~~~~~~ll~~~~vD~V~I-~tp~~---~H~~~~~~al~aG---khVl~EKPl-----a~~~~ea~~l~~~a~~~g~~l~ 143 (361)
T 3u3x_A 76 RIATAEEILEDENIGLIVS-AAVSS---ERAELAIRAMQHG---KDVLVDKPG-----MTSFDQLAKLRRVQAETGRIFS 143 (361)
T ss_dssp EESCHHHHHTCTTCCEEEE-CCCHH---HHHHHHHHHHHTT---CEEEEESCS-----CSSHHHHHHHHHHHHTTCCCEE
T ss_pred ccCCHHHHhcCCCCCEEEE-eCChH---HHHHHHHHHHHCC---CeEEEeCCC-----CCCHHHHHHHHHHHHHcCCEEE
Confidence 3455666665555666665 33211 1344455555543 566666542 2456777888888888787777
Q ss_pred Ecccc
Q 015768 202 VDNTY 206 (400)
Q Consensus 202 ~D~a~ 206 (400)
+.-.+
T Consensus 144 v~~~~ 148 (361)
T 3u3x_A 144 ILYSE 148 (361)
T ss_dssp EECHH
T ss_pred EechH
Confidence 65544
No 385
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=22.17 E-value=69 Score=29.91 Aligned_cols=30 Identities=33% Similarity=0.415 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMY 211 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~ 211 (400)
+.++++++++.|+++|+.||.|-++-+...
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 468899999999999999999999875544
No 386
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=22.11 E-value=3.4e+02 Score=22.52 Aligned_cols=30 Identities=10% Similarity=0.221 Sum_probs=17.7
Q ss_pred CcEEEeCChHHHH-HHHHHHhcCCCCEEEEeC
Q 015768 90 SSVMVTAGANQAF-VNIVLTLCDAGDSVVMFA 120 (400)
Q Consensus 90 ~~i~~~~g~t~a~-~~~~~~l~~~gd~vlv~~ 120 (400)
..+++|.+ +.++ ..+...|.+.|.+|++..
T Consensus 14 k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGA-ARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEEST-TSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCCeEEEEe
Confidence 34455544 4444 355566777888877654
No 387
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=22.05 E-value=71 Score=29.43 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
-+.++++++++.|+++|+.||+|-+.-...
T Consensus 81 Gt~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 81 GTLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 367889999999999999999999876444
No 388
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=22.01 E-value=3.5e+02 Score=22.56 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=49.0
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEe-CCCccc---hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc-
Q 015768 86 KLYKSSVMVTAGANQAFVNIVLTLCDAGDSVVMF-APYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE- 160 (400)
Q Consensus 86 ~~~~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~-~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~- 160 (400)
.++...+++|.++...=..+.+.|.+.|.+|++. ...-.. ....++..|.++..+ ..|-. |.+.+++.++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~Dv~----d~~~v~~~~~~ 102 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI-RADNR----DAEAIEQAIRE 102 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTT----CHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHHHHHHHH
Confidence 3444455555554333345556677788887765 322111 222334456666666 55422 5666666554
Q ss_pred ---cCCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 161 ---TKPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 161 ---~~~~~~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
....+..++-+......+. -.+.+++++..+
T Consensus 103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1122455553322222221 246666666554
No 389
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=21.96 E-value=62 Score=30.66 Aligned_cols=28 Identities=11% Similarity=-0.025 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
+.++++++++.|+++|+.||.|-|+-..
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 5788999999999999999999997643
No 390
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=21.93 E-value=68 Score=29.31 Aligned_cols=30 Identities=17% Similarity=0.256 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMY 211 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~ 211 (400)
+.++++++++.|+++|+.||.|-++-....
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTF 102 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 578899999999999999999999876544
No 391
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=21.85 E-value=3.5e+02 Score=22.50 Aligned_cols=93 Identities=10% Similarity=-0.066 Sum_probs=45.7
Q ss_pred EEEeCC-hHHHHHHHHHHhcCC-CCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEE
Q 015768 92 VMVTAG-ANQAFVNIVLTLCDA-GDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVS 169 (400)
Q Consensus 92 i~~~~g-~t~a~~~~~~~l~~~-gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~ 169 (400)
|++|.+ +.-+-..+-. |.+. |..|.+..-.-.. ...+...+++++.. .+ -|.+.++++++. ...|+
T Consensus 3 ilVtGatG~iG~~l~~~-L~~~~g~~V~~~~R~~~~-~~~~~~~~v~~~~~-D~------~d~~~l~~~~~~---~d~vi 70 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQ-AIANHIDHFHIGVRNVEK-VPDDWRGKVSVRQL-DY------FNQESMVEAFKG---MDTVV 70 (289)
T ss_dssp EEEETTTSHHHHHHHHH-HHHTTCTTEEEEESSGGG-SCGGGBTTBEEEEC-CT------TCHHHHHHHTTT---CSEEE
T ss_pred EEEEcCCchHHHHHHHH-HhhCCCCcEEEEECCHHH-HHHhhhCCCEEEEc-CC------CCHHHHHHHHhC---CCEEE
Confidence 555543 3344444433 5544 7655544222111 11123346666554 22 267888888863 35555
Q ss_pred EeCC-CCCCccCCCHHHHHHHHHHHHHcCC
Q 015768 170 VVNP-GNPSGTYIPERLLKRISDLCKAAGS 198 (400)
Q Consensus 170 l~~p-~nptG~~~~~~~l~~i~~l~~~~~~ 198 (400)
.+.. .++.. ........+++.|++.++
T Consensus 71 ~~a~~~~~~~--~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 71 FIPSIIHPSF--KRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp ECCCCCCSHH--HHHHHHHHHHHHHHHTTC
T ss_pred EeCCCCccch--hhHHHHHHHHHHHHHcCC
Confidence 4422 22211 123446778888888775
No 392
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=21.82 E-value=1.4e+02 Score=22.18 Aligned_cols=57 Identities=14% Similarity=0.133 Sum_probs=35.9
Q ss_pred HHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHc
Q 015768 128 MSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAA 196 (400)
Q Consensus 128 ~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~ 196 (400)
..++..|++++.. |...+++++.+...... +.+|.++....+ ..+.+.++.+.+++.
T Consensus 25 ~~l~~~G~~Vi~l------G~~~p~e~~v~~a~~~~-~d~v~lS~~~~~-----~~~~~~~~i~~l~~~ 81 (137)
T 1ccw_A 25 HAFTNAGFNVVNI------GVLSPQELFIKAAIETK-ADAILVSSLYGQ-----GEIDCKGLRQKCDEA 81 (137)
T ss_dssp HHHHHTTCEEEEE------EEEECHHHHHHHHHHHT-CSEEEEEECSST-----HHHHHTTHHHHHHHT
T ss_pred HHHHHCCCEEEEC------CCCCCHHHHHHHHHhcC-CCEEEEEecCcC-----cHHHHHHHHHHHHhc
Confidence 5668899999876 22357778777766332 488887744322 233466667666654
No 393
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=21.79 E-value=2.3e+02 Score=22.96 Aligned_cols=85 Identities=8% Similarity=0.120 Sum_probs=46.5
Q ss_pred EEeCChHHHHHHHHHHhcCC--CCEE--EEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCH----HHHHHhhccCCC
Q 015768 93 MVTAGANQAFVNIVLTLCDA--GDSV--VMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDA----DWLEKTLETKPT 164 (400)
Q Consensus 93 ~~~~g~t~a~~~~~~~l~~~--gd~v--lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----e~l~~~l~~~~~ 164 (400)
++.+|.-..+..++.++..+ +-.| +++++.-......++..|+.+..+.+.+-. +- +++.+.++...
T Consensus 5 Vl~SG~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~----~r~~~~~~~~~~l~~~~- 79 (209)
T 1meo_A 5 VLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYK----NRVEFDSAIDLVLEEFS- 79 (209)
T ss_dssp EEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSS----SHHHHHHHHHHHHHHTT-
T ss_pred EEEECCchHHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEECccccC----chhhhhHHHHHHHHhcC-
Confidence 55566556677777766543 2232 455665444556678889887766222111 21 23444454332
Q ss_pred CeEEEEeCCCCCCccCCCHHHH
Q 015768 165 PKLVSVVNPGNPSGTYIPERLL 186 (400)
Q Consensus 165 ~~~v~l~~p~nptG~~~~~~~l 186 (400)
+.++++.. .|.+++.+.+
T Consensus 80 ~Dliv~a~----y~~il~~~~l 97 (209)
T 1meo_A 80 IDIVCLAG----FMRILSGPFV 97 (209)
T ss_dssp CCEEEEES----CCSCCCHHHH
T ss_pred CCEEEEcc----hhhhCCHHHH
Confidence 57777653 4677884433
No 394
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=21.77 E-value=3.3e+02 Score=22.25 Aligned_cols=67 Identities=15% Similarity=0.149 Sum_probs=34.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc
Q 015768 89 KSSVMVTAGANQAFVNIVLTLCDAGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE 160 (400)
Q Consensus 89 ~~~i~~~~g~t~a~~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~ 160 (400)
...+++|.++...=..+...|.+.|.+|++..-.-.......+..+.++..+ ..|-. +.+.+++.++
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~D~~----~~~~v~~~~~ 78 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFA-PADVT----SEKDVQTALA 78 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEE-ECCTT----CHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEE-EcCCC----CHHHHHHHHH
Confidence 3445555444333345556667778777766444334444444445444444 44322 5556665554
No 395
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=21.71 E-value=3.9e+02 Score=23.05 Aligned_cols=46 Identities=17% Similarity=0.109 Sum_probs=27.5
Q ss_pred CCHHHHHHhhccCCCCe--EEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 150 PDADWLEKTLETKPTPK--LVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 150 ~~~e~l~~~l~~~~~~~--~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
.+.+.+++++.... .+ .++.....||. .. -.++.+.|+++|+.++.
T Consensus 169 ~~~~~l~~~~~~~~-~~~~p~~~Q~~~~~~---~~---~~~l~~~~~~~gi~v~a 216 (324)
T 3ln3_A 169 FNHRQLERILNXPG-LXYXPVCNQVECHLY---LN---QRXLLDYCESXDIVLVA 216 (324)
T ss_dssp CCHHHHHHHHTCTT-CCCCCSEEEEECBTT---BC---CHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHhcC-ccCCceeeEeeeCcc---cc---hHHHHHHHHHcCCEEEE
Confidence 46788888876322 12 22233233443 12 15788999999999885
No 396
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=21.63 E-value=1.6e+02 Score=25.50 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=11.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEE
Q 015768 182 PERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~ 202 (400)
+.++.++|.++++++|+.+.+
T Consensus 108 ~~~ea~~l~~~a~~~g~~~~v 128 (312)
T 3o9z_A 108 WPEEIARLKELEARTGRRVYT 128 (312)
T ss_dssp CHHHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 445555555555555555544
No 397
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=21.49 E-value=1.8e+02 Score=19.07 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=26.1
Q ss_pred CCCeEEEEeccCCHHHHHHHHHHHHHHHHHHh
Q 015768 356 CRGHLRISFGGLVEDDCKAAADRLRRGLEELV 387 (400)
Q Consensus 356 ~~~~iRi~~~~~~~~~~~~~~~~l~~~l~~~~ 387 (400)
+...+|+|+..-+..+.+.....|-+++.++-
T Consensus 44 gakrvrisitartkkeaekfaailikvfaelg 75 (106)
T 1qys_A 44 GAKRVRISITARTKKEAEKFAAILIKVFAELG 75 (106)
T ss_dssp CCSEEEEEEECSSHHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEEEEecchhHHHHHHHHHHHHHHHhC
Confidence 35678999877688899999999999988763
No 398
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=21.32 E-value=77 Score=30.55 Aligned_cols=29 Identities=21% Similarity=0.393 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 47889999999999999999999986554
No 399
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=21.29 E-value=86 Score=30.17 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 181 IPERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 181 ~~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
-+.++++++++.|+++|+-||.|-++.+..
T Consensus 216 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 216 GDKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CCHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 367899999999999999999999987554
No 400
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=21.28 E-value=2e+02 Score=24.92 Aligned_cols=73 Identities=10% Similarity=0.081 Sum_probs=42.5
Q ss_pred ccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 123 YFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 123 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
|..+.+.+....++++.+ ...+. ...+....++..+ +.|++.-| ...+.++.+++.++++++|+.+.+
T Consensus 52 ~~~~~~~l~~~~~D~V~i-~tp~~---~h~~~~~~al~~g---k~v~~EKP-----~~~~~~~~~~l~~~a~~~g~~~~v 119 (331)
T 4hkt_A 52 VRTIDAIEAAADIDAVVI-CTPTD---THADLIERFARAG---KAIFCEKP-----IDLDAERVRACLKVVSDTKAKLMV 119 (331)
T ss_dssp ECCHHHHHHCTTCCEEEE-CSCGG---GHHHHHHHHHHTT---CEEEECSC-----SCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred cCCHHHHhcCCCCCEEEE-eCCch---hHHHHHHHHHHcC---CcEEEecC-----CCCCHHHHHHHHHHHHHcCCeEEE
Confidence 445555555445666655 33222 2344555555543 55665544 234677788888888888888877
Q ss_pred ccccc
Q 015768 203 DNTYE 207 (400)
Q Consensus 203 D~a~~ 207 (400)
.-.+.
T Consensus 120 ~~~~r 124 (331)
T 4hkt_A 120 GFNRR 124 (331)
T ss_dssp CCGGG
T ss_pred ccccc
Confidence 55543
No 401
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=21.13 E-value=1.2e+02 Score=28.88 Aligned_cols=49 Identities=18% Similarity=0.277 Sum_probs=33.4
Q ss_pred HHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 015768 152 ADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (400)
Q Consensus 152 ~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~ 204 (400)
.+.+++++... +++|-+-..+...... .+..+++.++|++|++.+|+++
T Consensus 28 ~~~ve~al~~G--v~~vQlR~K~~~~~~~--~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 28 YGQVEAGLQNG--VTLVQIREKDADTKFF--IEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHHTT--CSEEEECCSSSCTTHH--HHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHHCC--CCEEEEecCCCCHHHH--HHHHHHHHHHHHhcCCEEEEeC
Confidence 46677777655 3777776554433222 3346788889999999999976
No 402
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=20.96 E-value=1.8e+02 Score=25.29 Aligned_cols=24 Identities=8% Similarity=0.194 Sum_probs=13.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNT 205 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a 205 (400)
+.++.+++.++++++|+.+.+.-.
T Consensus 103 ~~~e~~~l~~~a~~~g~~~~v~~~ 126 (330)
T 3e9m_A 103 NAAEAEELFAIAQEQGVFLMEAQK 126 (330)
T ss_dssp SHHHHHHHHHHHHHTTCCEEECCS
T ss_pred CHHHHHHHHHHHHHcCCeEEEEEh
Confidence 455566666666666665555443
No 403
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=20.93 E-value=77 Score=29.31 Aligned_cols=28 Identities=18% Similarity=0.344 Sum_probs=24.8
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEE
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVV 202 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~ 202 (400)
++.|-.++.+++++|.+.|+++||-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 4567789999999999999999999884
No 404
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=20.93 E-value=1.8e+02 Score=27.76 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=48.8
Q ss_pred CCCCEEEEeCCCccchh-------HHHHhcCcEEEE--eccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCC
Q 015768 111 DAGDSVVMFAPYYFNSY-------MSFQMTGVTHIL--VGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYI 181 (400)
Q Consensus 111 ~~gd~vlv~~p~~~~~~-------~~~~~~g~~~~~--~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~ 181 (400)
++||+|++....-++.. +.+...|++++. .....-.| ..+.++|...++.-. |+-++..+.
T Consensus 322 ~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~Sg-Ha~~~eL~~~~~~~~-Pk~~ipvHG-------- 391 (555)
T 3zq4_A 322 NPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHTSG-HGGQEEQKLMLRLIK-PKFFMPIHG-------- 391 (555)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCCCS-SCCHHHHHHHHHHSC-EEEEEEESB--------
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEEeC-CCCHHHHHHHHHHhC-CCEEEEcCC--------
Confidence 47899999888766644 234667888765 10111223 458888888887432 577765543
Q ss_pred CHHHHHHHHHHHHHcCC
Q 015768 182 PERLLKRISDLCKAAGS 198 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~ 198 (400)
....+.+.++++++.|+
T Consensus 392 e~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 392 EYRMQKMHVKLATDCGI 408 (555)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 23347777777777664
No 405
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.84 E-value=2.7e+02 Score=23.70 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=41.4
Q ss_pred CCCEEEEeCCCccchhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc---cCCCCeEEEEeCCCCCCccCCCHHHHHH
Q 015768 112 AGDSVVMFAPYYFNSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE---TKPTPKLVSVVNPGNPSGTYIPERLLKR 188 (400)
Q Consensus 112 ~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~---~~~~~~~v~l~~p~nptG~~~~~~~l~~ 188 (400)
++..+++..+.| .-.++.+|++.+.+ .....+..++...|.++++ .+. +++|+...-.++ .-.+.
T Consensus 178 ~~~~~v~~H~af---~Yf~~~yGl~~~~~-~~~~~~~eps~~~l~~l~~~ik~~~-v~~if~e~~~~~-------~~~~~ 245 (286)
T 3gi1_A 178 RSKTFVTQHTAF---SYLAKRFGLKQLGI-SGISPEQEPSPRQLKEIQDFVKEYN-VKTIFAEDNVNP-------KIAHA 245 (286)
T ss_dssp SCCEEEEEESCC---HHHHHHTTCEEEEE-ECSCC---CCHHHHHHHHHHHHHTT-CCEEEECTTSCT-------HHHHH
T ss_pred CCCEEEEECCch---HHHHHHCCCeEeec-cccCCCCCCCHHHHHHHHHHHHHcC-CCEEEEeCCCCh-------HHHHH
Confidence 456777765544 44567899987766 3222223456666666554 333 678776532222 11333
Q ss_pred HHHHHHHcCCEEEE
Q 015768 189 ISDLCKAAGSWLVV 202 (400)
Q Consensus 189 i~~l~~~~~~~li~ 202 (400)
++++.|+.++.
T Consensus 246 ---la~~~g~~v~~ 256 (286)
T 3gi1_A 246 ---IAKSTGAKVKT 256 (286)
T ss_dssp ---HHHTTTCEEEE
T ss_pred ---HHHHhCCeEEE
Confidence 45677877663
No 406
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=20.83 E-value=3.7e+02 Score=22.44 Aligned_cols=30 Identities=17% Similarity=0.284 Sum_probs=17.8
Q ss_pred CcEEEeCChHHHH-HHHHHHhcCCCCEEEEeC
Q 015768 90 SSVMVTAGANQAF-VNIVLTLCDAGDSVVMFA 120 (400)
Q Consensus 90 ~~i~~~~g~t~a~-~~~~~~l~~~gd~vlv~~ 120 (400)
..+++|.++ .++ ..+.+.|.+.|.+|++.+
T Consensus 12 k~~lVTGas-~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 12 KVAFVTGAA-RGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCeEEEEe
Confidence 344555444 444 455566777888877653
No 407
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=20.82 E-value=2.6e+02 Score=22.71 Aligned_cols=13 Identities=8% Similarity=0.079 Sum_probs=6.3
Q ss_pred cEEEeCChHHHHH
Q 015768 91 SVMVTAGANQAFV 103 (400)
Q Consensus 91 ~i~~~~g~t~a~~ 103 (400)
++-+.+|.|+...
T Consensus 124 ~v~viPGiSs~~a 136 (232)
T 2qbu_A 124 KTEMVPGVTSFTA 136 (232)
T ss_dssp CEEEECCCCHHHH
T ss_pred cEEEeCCccHHHH
Confidence 3555555544433
No 408
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=20.72 E-value=74 Score=29.59 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEEccccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFMY 211 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~~ 211 (400)
+.++++++++.|+++|+.||.|-++-+...
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 478899999999999999999998765443
No 409
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=20.57 E-value=76 Score=30.56 Aligned_cols=29 Identities=14% Similarity=0.217 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 57899999999999999999998876544
No 410
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=20.55 E-value=3.6e+02 Score=22.36 Aligned_cols=96 Identities=13% Similarity=0.075 Sum_probs=46.1
Q ss_pred cEEEeCChHHHHH-HHHHHhcCCCCEEEEeCCCccc----hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhc----c
Q 015768 91 SVMVTAGANQAFV-NIVLTLCDAGDSVVMFAPYYFN----SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLE----T 161 (400)
Q Consensus 91 ~i~~~~g~t~a~~-~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~----~ 161 (400)
.+++.+|++.++- .+...|.+.|.+|++..-.-.. ....++..|.++..+ ..|-. |.+.++++++ .
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D~~----d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV-KADVS----QESEVEALFAAVIER 103 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE-ECCTT----SHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEE-ECCCC----CHHHHHHHHHHHHHH
Confidence 3444445445544 4555677788887765332111 222334456566555 44422 5556665554 1
Q ss_pred CCCCeEEEEeCCCCCCcc--CCCHHHHHHHHH
Q 015768 162 KPTPKLVSVVNPGNPSGT--YIPERLLKRISD 191 (400)
Q Consensus 162 ~~~~~~v~l~~p~nptG~--~~~~~~l~~i~~ 191 (400)
...+..++-.......+. -.+.+++++..+
T Consensus 104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 122455554322222221 246566666554
No 411
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=20.48 E-value=2.7e+02 Score=23.16 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=10.1
Q ss_pred HHHHHhcCCCeEEcCCCCCCC
Q 015768 22 IQELVRGAKNAVSLAQGVVYW 42 (400)
Q Consensus 22 ~~~~~~~~~~~i~~~~~~~~~ 42 (400)
+.+..+.|++++-++.|+|.+
T Consensus 89 i~~~~~~g~~Va~l~~GDP~~ 109 (259)
T 2e0n_A 89 MAEEVQAGRRVAVVSVGDGGF 109 (259)
T ss_dssp HHHHHHTTCEEEEEESBCTTB
T ss_pred HHHHHHCCCeEEEEeCCCCcc
Confidence 333334445555555555443
No 412
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=20.44 E-value=1.8e+02 Score=25.51 Aligned_cols=22 Identities=14% Similarity=-0.123 Sum_probs=11.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEEc
Q 015768 182 PERLLKRISDLCKAAGSWLVVD 203 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D 203 (400)
+.++.+++.++++++|+.+.+.
T Consensus 111 ~~~~~~~l~~~a~~~g~~~~v~ 132 (354)
T 3q2i_A 111 RWEDGLEMVKAADKAKKHLFVV 132 (354)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEC
T ss_pred CHHHHHHHHHHHHHhCCeEEEE
Confidence 4445555555555555555543
No 413
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=20.42 E-value=2e+02 Score=23.60 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccc---hhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCC
Q 015768 98 ANQAFVNIVLTLCDAGDSVVMFAPYYFN---SYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPG 174 (400)
Q Consensus 98 ~t~a~~~~~~~l~~~gd~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~ 174 (400)
+|+++..+.+. ...|.++++..|.-.. -..+..+.|...--+ +.. +.+++.+.+..+ ..+|+|.-.+
T Consensus 42 TT~Llr~~~r~-~~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~-~v~------~~~di~~~i~~~--~dvV~IDEaQ 111 (219)
T 3e2i_A 42 SEELIRRLRRG-IYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAI-NIS------KASEIMTHDLTN--VDVIGIDEVQ 111 (219)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEEEEC-----------CBTTBCCEEE-EES------SGGGGGGSCCTT--CSEEEECCGG
T ss_pred HHHHHHHHHHH-HHcCCceEEEEeccCCcchhhhHHHhcCCceeeE-EeC------CHHHHHHHHhcC--CCEEEEechh
Confidence 45566665444 4456777877776432 223444555432222 222 223333333332 4788877665
Q ss_pred CCCccCCCHHHHHHHHHHHHHcCCEEEEccccccc
Q 015768 175 NPSGTYIPERLLKRISDLCKAAGSWLVVDNTYEYF 209 (400)
Q Consensus 175 nptG~~~~~~~l~~i~~l~~~~~~~li~D~a~~~~ 209 (400)
+ ++.+.++.+.+++ ..|+.+|+=.--.+|
T Consensus 112 F-----f~~~~v~~l~~la-~~gi~Vi~~GLd~DF 140 (219)
T 3e2i_A 112 F-----FDDEIVSIVEKLS-ADGHRVIVAGLDMDF 140 (219)
T ss_dssp G-----SCTHHHHHHHHHH-HTTCEEEEEEESBCT
T ss_pred c-----CCHHHHHHHHHHH-HCCCEEEEeeccccc
Confidence 5 5666677777777 589999985554433
No 414
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=20.36 E-value=2.5e+02 Score=21.29 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=37.2
Q ss_pred CCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCC-HHHHHHHHH-HHHHcCCE-EEEccccc
Q 015768 149 HPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIP-ERLLKRISD-LCKAAGSW-LVVDNTYE 207 (400)
Q Consensus 149 ~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~-~~~l~~i~~-l~~~~~~~-li~D~a~~ 207 (400)
....+.|.++++... +..+++..|-|.-|..-. ....+..++ +..+.++. .++||.++
T Consensus 41 ~~~~~~l~~li~~~~-~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 41 DYGLSRLSELIKDYT-IDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp BCCHHHHHHHHTTSE-EEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred HHHHHHHHHHHHHcC-CCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 447888999888654 788999988666665432 222344443 34445654 56698877
No 415
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=20.27 E-value=3.6e+02 Score=23.96 Aligned_cols=29 Identities=24% Similarity=0.314 Sum_probs=16.9
Q ss_pred HHHHHHHHhcCeEEeCCCccCCCCeEEEEec
Q 015768 335 EVVRWLAHRHGVVVIPGGACGCRGHLRISFG 365 (400)
Q Consensus 335 ~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~ 365 (400)
++.. +..+.|+.-..|.+|.-.+ -|++-+
T Consensus 289 ~~l~-~~~~~~~~~k~g~w~~~~~-~~~~~g 317 (366)
T 1xp8_A 289 DLVG-LAADMDIIKKAGSFYSYGD-ERIGQG 317 (366)
T ss_dssp HHHH-HHHHTTSSEEETTEEESSS-SEEEES
T ss_pred hHHH-HHHHhCeeeccCceeeECC-eEecch
Confidence 4443 4557888888777764322 345444
No 416
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=20.24 E-value=83 Score=28.82 Aligned_cols=29 Identities=14% Similarity=0.111 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEEcccccccc
Q 015768 182 PERLLKRISDLCKAAGSWLVVDNTYEYFM 210 (400)
Q Consensus 182 ~~~~l~~i~~l~~~~~~~li~D~a~~~~~ 210 (400)
+.++++++++.|+++|+.||.|-++-+..
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 47889999999999999999999987554
No 417
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=20.13 E-value=1.5e+02 Score=26.07 Aligned_cols=71 Identities=17% Similarity=0.266 Sum_probs=41.3
Q ss_pred chhHHHHhcCcEEEEeccCCCCCCCCCHHHHHHhhccCCCCeEEEEeCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEcc
Q 015768 125 NSYMSFQMTGVTHILVGPCSSKTLHPDADWLEKTLETKPTPKLVSVVNPGNPSGTYIPERLLKRISDLCKAAGSWLVVDN 204 (400)
Q Consensus 125 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~e~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~D~ 204 (400)
.+.+.+....++++.+ ..... ...+....+++.+ +-|+++-|- ..+.++.++|.++++++|+.+.+.-
T Consensus 80 ~~~~ll~~~~~D~V~i-~tp~~---~h~~~~~~al~aG---k~Vl~EKP~-----a~~~~ea~~l~~~a~~~g~~~~v~~ 147 (350)
T 3rc1_A 80 GYPALLERDDVDAVYV-PLPAV---LHAEWIDRALRAG---KHVLAEKPL-----TTDRPQAERLFAVARERGLLLMENF 147 (350)
T ss_dssp SHHHHHTCTTCSEEEE-CCCGG---GHHHHHHHHHHTT---CEEEEESSS-----CSSHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHhcCCCCCEEEE-CCCcH---HHHHHHHHHHHCC---CcEEEeCCC-----CCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 4444554445566655 33222 2345555556544 456665442 2467788888888888888887755
Q ss_pred ccc
Q 015768 205 TYE 207 (400)
Q Consensus 205 a~~ 207 (400)
.+.
T Consensus 148 ~~R 150 (350)
T 3rc1_A 148 MFL 150 (350)
T ss_dssp GGG
T ss_pred ccc
Confidence 443
No 418
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=20.07 E-value=5.1e+02 Score=23.78 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=21.3
Q ss_pred CeEEEEecc-CCHHHHHHHHHHHHHHHHHH
Q 015768 358 GHLRISFGG-LVEDDCKAAADRLRRGLEEL 386 (400)
Q Consensus 358 ~~iRi~~~~-~~~~~~~~~~~~l~~~l~~~ 386 (400)
..-||+-+. .+..|+.++++...+.-+-+
T Consensus 397 r~~ria~gsg~~~~~v~~ll~~~~~~~~~~ 426 (443)
T 3dm5_A 397 RIKRIARGSGTSTKDVKELLDQYRQMKKLF 426 (443)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCCHHHHHHHHHHHHHHHHHH
Confidence 456787666 78999999988887754433
Done!