BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015771
(400 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3U2U7|MET17_MOUSE Methyltransferase-like protein 17, mitochondrial OS=Mus musculus
GN=Mettl17 PE=2 SV=2
Length = 461
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 111/243 (45%), Gaps = 39/243 (16%)
Query: 25 RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDL-- 82
R+P F P ++DFG+GTGS WA W +SL + V+ S +M + L++G +
Sbjct: 181 RIPEFRPQTLMDFGSGTGSVAWAAHRTWGQSLREYVCVDSSAAMLGLAEKLLKGGSESGK 240
Query: 83 PLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 142
P I Q L + + D+V+++Y L E+PS DRI +++ LW T LVLVE
Sbjct: 241 PCIPGVFFRQFLPVS---PKVQFDVVVSAYALSELPSRADRIEVIQNLWRKTSHFLVLVE 297
Query: 143 PGTPQGSSIISQMRSHILWMEKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHE 202
GT G ++ R+ +L E K + LR + APCPHE
Sbjct: 298 NGTKAGHRLLMDARNLVL-------------------GEKEKSPLDLRPSF-VFAPCPHE 337
Query: 203 GRCPLENSGK--YCHFVQRLQRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRE-- 258
CP N+ K C F Q AY + ++E FS V RG P+E
Sbjct: 338 LPCPQLNASKSLACSFSQ---------AYHPIPFNWNKKPKEEIFSMVILARGS-PKEAN 387
Query: 259 RWP 261
RWP
Sbjct: 388 RWP 390
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 341 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 399
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 389 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVVTARRHGRDLYRCARVSSWGDLLP 442
>sp|Q2TBP8|MET17_BOVIN Methyltransferase-like protein 17, mitochondrial OS=Bos taurus
GN=METTL17 PE=2 SV=1
Length = 462
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 109/242 (45%), Gaps = 37/242 (15%)
Query: 25 RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG--PKDL 82
RLP F P ++DFG+GTGS WA W +SL + V+ S +M + L++G +
Sbjct: 181 RLPEFQPQTLMDFGSGTGSVTWAAHSTWGQSLREYMCVDSSAAMLELAEKLLKGGSGSGM 240
Query: 83 PLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 142
P + Q L + + D+V+A++ L E+PS DR +V+ LW T LVL+E
Sbjct: 241 PCVPGVFFRQFLPVS---PKVQFDVVVAAFSLSELPSKADRTDVVQTLWRKTGHFLVLIE 297
Query: 143 PGTPQGSSIISQMRSHILWMEKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHE 202
GT G S++ R +L KE S + R G + APCPHE
Sbjct: 298 NGTKAGHSLLMDARDLVL-----------------NGKEKSP--LDPRPGF-VFAPCPHE 337
Query: 203 GRCPLENSGK--YCHFVQRLQRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPR-ER 259
CP + K C F Q AY + ++EKFS V RG + R
Sbjct: 338 LPCPQLTASKPLACSFSQ---------AYYPIPFSWNKKPKEEKFSLVILARGSPEKANR 388
Query: 260 WP 261
WP
Sbjct: 389 WP 390
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 341 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 399
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 389 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVITARRHGRDLYRCARVSSWGDLLP 442
>sp|Q9H7H0|MET17_HUMAN Methyltransferase-like protein 17, mitochondrial OS=Homo sapiens
GN=METTL17 PE=1 SV=1
Length = 456
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 109/241 (45%), Gaps = 38/241 (15%)
Query: 25 RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQGPKDL-- 82
R P F P ++DFG+GTGS WA +W +SL + V+ S +M + L++G +
Sbjct: 180 RNPAFQPQTLMDFGSGTGSVTWAAHSIWGQSLREYMCVDRSAAMLVLAEKLLKGGSESGE 239
Query: 83 PLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRDVLVLVE 142
P I Q L + + D+V++++ L E+PS DR +V+ LW T LVLVE
Sbjct: 240 PYIPGVFFRQFLPVS---PKVQFDVVVSAFSLSELPSKADRTEVVQTLWRKTGHFLVLVE 296
Query: 143 PGTPQGSSIISQMRSHILWMEKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHE 202
GT G S++ R +L K K + R G + APCPHE
Sbjct: 297 NGTKAGHSLLMDARDLVL-------------------KGKEKSPLDPRPGF-VFAPCPHE 336
Query: 203 GRCPLENSGKYCHFVQRLQRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRE--RW 260
CP + + C F Q AY + ++EKFS V RG P E RW
Sbjct: 337 LPCP-QLTNLACSFSQ---------AYHPIPFSWNKKPKEEKFSMVILARGS-PEEAHRW 385
Query: 261 P 261
P
Sbjct: 386 P 386
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 341 WGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFT-RSKNPTLHRLAKKSLWGDLWP 399
W RI ++R R V +C +G QH V T R L+R A+ S WGDL P
Sbjct: 385 WPRITQPVLKRPRHVHCHLC------CPDGHMQHAVLTARRHGRDLYRCARVSSWGDLLP 438
>sp|Q86ZU7|CO112_SCHPO Rsm22-cox11 tandem protein 2, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cos1102 PE=1 SV=2
Length = 753
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 34 VLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG--PKDLPLIHSYNSI 91
+LD G G G A V+P + V++VE + +++ + P P + S
Sbjct: 177 ILDCGKGPGIGALASYSVFP-TPNSVSIVEENPFLKKIIYDIHHNIYPSTSP---NPTSP 232
Query: 92 QALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRD---VLVLVEPGTPQG 148
LN+ + + LVIAS L E+ S ++ +R LW L + +LVL E GT +G
Sbjct: 233 VTLNRLPLGKKDSYTLVIASNKLLEMKSEKELFDYLRSLWSLVSNDGGLLVLCERGTKRG 292
Query: 149 SSIISQMRSHILWMEKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCP-- 206
S+I + R+ +L +KSK+T+ + + HIVAPCPH+GRCP
Sbjct: 293 FSLIQRARTFLL------------QKSKNTSDK--------QFNAHIVAPCPHDGRCPID 332
Query: 207 LENS--GKYCHFVQRLQRTTSQRAY 229
+EN C F Q + R Y
Sbjct: 333 IENGVRANICSFKQHFFLSPFSRLY 357
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 323 KDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFTRSKN 382
D++ E + + W RII P++R V +DVC S+ + + +S+
Sbjct: 393 NDEDLLENVNVTSPTLKNWPRIIRPPLKRDGHVIIDVC------DSDARLRRNIVPKSQG 446
Query: 383 PTLHRLAKKSLWGDLWP 399
+RLA+KS WGDL+P
Sbjct: 447 KLAYRLARKSAWGDLFP 463
>sp|Q9UTM2|CO111_SCHPO Rsm22-cox11 tandem protein 1, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cox1101 PE=1 SV=2
Length = 753
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 34 VLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSMQRAGQSLMQG--PKDLPLIHSYNSI 91
+LD G G G A V+P + V++VE + +++ + P P + S
Sbjct: 177 ILDCGKGPGIGALASYSVFP-TPNSVSIVEENPFLKKIIYDIHHNIYPSTSP---NPTSP 232
Query: 92 QALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWDLTRD---VLVLVEPGTPQG 148
LN+ + + LVIAS L E+ S ++ +R LW L + +LVL E GT +G
Sbjct: 233 VTLNRLPLGKKDSYTLVIASNKLLEMKSEKELFDYLRSLWSLVSNDGGLLVLCERGTKRG 292
Query: 149 SSIISQMRSHILWMEKRKSRKYEARKSKDTNKETSKDLVTLRSGVHIVAPCPHEGRCP-- 206
S+I + R+ +L +KSK+T+ + + HIVAPCPH+GRCP
Sbjct: 293 FSLIQRARTFLL------------QKSKNTSDK--------QFNAHIVAPCPHDGRCPID 332
Query: 207 LENS--GKYCHFVQRLQRTTSQRAY 229
+EN C F Q + R Y
Sbjct: 333 IENGVRANICSFKQHFFLSPFSRLY 357
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 323 KDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFTRSKN 382
D++ E + + W RII P++R V +DVC S+ + + +S+
Sbjct: 393 NDEDLLENVNVTSPTLKNWPRIIRPPLKRDGHVIIDVC------DSDARLRRNIVPKSQG 446
Query: 383 PTLHRLAKKSLWGDLWP 399
+RLA+KS WGDL+P
Sbjct: 447 KLAYRLARKSAWGDLFP 463
>sp|P36056|RT22_YEAST 37S ribosomal protein S22, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RSM22 PE=1
SV=1
Length = 628
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 136/319 (42%), Gaps = 59/319 (18%)
Query: 101 SEREHDLVIASYVL---GEVPSLQDRITIVRQLWDLT-RDVLVLVEPGTPQGSSIISQMR 156
+ +E+DL+I ++ L G +Q I L L +V++E G P G II++ R
Sbjct: 265 ASKEYDLIILTHQLLHDGNQFPIQVDENIEHYLNILAPGGHIVIIERGNPMGFEIIARAR 324
Query: 157 SHILWMEKRK----------SRKYEARKSKDTNKETSKDLVTLRSG--VHIVAPCPHEGR 204
L E SR R KD +L + S + ++APCPH+ +
Sbjct: 325 QITLRPENFPDEFGKIPRPWSRGVTVRGKKDA------ELGNISSNYFLKVIAPCPHQRK 378
Query: 205 CPLE--NSGKYCHFVQR-LQRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRERWP 261
CPL+ N Y H + L+ Q++ KR KFS + ++G+ W
Sbjct: 379 CPLQVGNPNFYTHKEGKDLKFCNFQKSIKRP-----------KFS-IELKKGKLLATSW- 425
Query: 262 LDGMKFDTLK-EQHAKRNPEDLEI-DYEDLLRLQAEAEVEPCKKEDLVNYESDEVQDDTV 319
DG + + + + +RN D EI +Y L+ E K++ E +++++ V
Sbjct: 426 -DGSQGNASRLKGTGRRNGRDYEILNYSYLI-------FERSHKDENTLKEIKKLRNENV 477
Query: 320 DSDKDQEKGEEETIPADLGGGWGRIIFSPVRRGRQVAMDVCRSIKRDGSEGSFQHLVFTR 379
+ D ++ D W RII PV+R V MD+C G + +R
Sbjct: 478 NGKYDI-----GSLGDDTQNSWPRIINDPVKRKGHVMMDLC------APSGELEKWTVSR 526
Query: 380 SKNPTLHRLAKKSLWGDLW 398
S + ++ A+KS GDLW
Sbjct: 527 SFSKQIYHDARKSKKGDLW 545
>sp|Q12N04|CMOA_SHEDO tRNA (cmo5U34)-methyltransferase OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=cmoA PE=3
SV=2
Length = 243
Score = 35.4 bits (80), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
Query: 22 FARRLPGFSP-AKVLDFGAGTGSAFWALREVWPRSLEKVNLVEPSQSM-QRAGQSLMQGP 79
FARR +P +KV D G+ GSA ++R ++ ++ SQSM +R ++L
Sbjct: 50 FARRY--VTPNSKVFDLGSSLGSATLSIRRQIEGRQCQIIAIDNSQSMIERCEENLAAYV 107
Query: 80 KDLPLIHSYNSIQALNKDISKSEREHDLVIASYVLGEVPSLQDRITIVRQLWD--LTRDV 137
D + + I+ N DI+ + +V+ ++ L +P +DR T++++++D L +
Sbjct: 108 SDTQVTLVCDDIR--NVDINNAS----MVVLNFTLQFLPP-EDRDTLIKRIYDGMLPGGI 160
Query: 138 LVLVE 142
LVL E
Sbjct: 161 LVLSE 165
>sp|C6V598|BIOC_NEORI Malonyl-CoA O-methyltransferase BioC OS=Neorickettsia risticii
(strain Illinois) GN=bioC PE=3 SV=1
Length = 250
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 25 RLPGFSPAKVLDFGAGTGSAFWALREVWPRSLEKVN 60
RLP F PA VLD GAGTG L +P + +N
Sbjct: 41 RLPHFMPASVLDIGAGTGYLTKLLLSEFPNACYTMN 76
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 34.7 bits (78), Expect = 1.4, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 218 QRLQRTTSQRAYKRSKSEPLRGFEDEKFSFVAFRRGERPRERWPLDGMKFDTLKEQHAKR 277
+ L+R +R +R K E L+ E+ +R E+ R + K + LK Q +R
Sbjct: 2751 EELKRQEQER-LEREKQEQLQKEEE-------LKRQEQERLQ------KEEALKRQEQER 2796
Query: 278 NPEDLEIDYEDLLRLQAEAEVEPCKKEDLVNYESDEVQDDTVDSDKDQEKGEEE 331
++ E+ ++ RL+ E + + K+E+L E + +Q + ++QE+ ++E
Sbjct: 2797 LQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKE 2850
>sp|A1VFE7|RNH2_DESVV Ribonuclease HII OS=Desulfovibrio vulgaris subsp. vulgaris (strain
DP4) GN=rnhB PE=3 SV=1
Length = 220
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 26 LPGFSPAKVLDF--------GAGTGSAFWALREVWPRSLEKVNLVEPS-QSMQRAGQSLM 76
LPG + +K L G + + W L VWPR ++++N+++ + ++M RA + L
Sbjct: 46 LPGLTDSKKLTAARRESLAEGIRSCAVTWGLGVVWPRDIDRINILQATFRAMARAVRVLR 105
Query: 77 QGPKDL 82
Q P L
Sbjct: 106 QPPPAL 111
>sp|Q6AE55|MRAZ_LEIXX Protein MraZ OS=Leifsonia xyli subsp. xyli (strain CTCB07) GN=mraZ
PE=3 SV=1
Length = 143
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 11/99 (11%)
Query: 53 PRSLEKVNLVEPSQSMQR--AGQSLMQGPKDLPLIHSYNSIQALNKDI------SKSERE 104
P+ EK ++ P++ + +G L +G + + S Q+L++ I SK R+
Sbjct: 8 PKLDEKGRIILPAKFREELASGLVLTRGQEHCVYVFSQREFQSLHEKIRQAPVTSKQARD 67
Query: 105 HDLVIASYVLGEVPSLQDRITI---VRQLWDLTRDVLVL 140
+ V S EVP Q+R+T+ +R L RD++V+
Sbjct: 68 YLRVFLSGASAEVPDKQNRVTVPPALRSYAGLDRDLVVI 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,333,523
Number of Sequences: 539616
Number of extensions: 6718264
Number of successful extensions: 25591
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 25347
Number of HSP's gapped (non-prelim): 263
length of query: 400
length of database: 191,569,459
effective HSP length: 120
effective length of query: 280
effective length of database: 126,815,539
effective search space: 35508350920
effective search space used: 35508350920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)