Your job contains 1 sequence.
>015772
MELSIGPTSSVREDGDDDNRKPTQEDEDHHHHEDRQTETAAAAAARLVDSAEIRRCSTPT
ATAETANIIQQLDLLPNTPVVVPLPRNPTPSSILASFPAANWTSAGSSEAAGSGQMARDA
NKLPMAIPAPLDLLVPHHNDDEDPSSPEAEDGDGSHGAGALSSSSLNTTSSAQMDFCIHS
SNHHHNDTSTTGTGGTNNIRKSCGDIFRASNDNNNEVVDGCSELEDENGCSTRKKLRLSK
QQSAFLEESFKEHTTLTPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKR
CCETLTEENRRLQKELQELRALKSTAGNNPFYMQLPATTLTMCPSCERVATTNINPPPLP
TTTTTPPKATSNSTGSSPLSSRPMFVPFSHHKPTTTDGQI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015772
(400 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 509 8.5e-49 1
TAIR|locus:2137599 - symbol:HAT22 species:3702 "Arabidops... 471 9.1e-45 1
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 465 3.9e-44 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 434 7.5e-41 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 431 1.6e-40 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 431 1.6e-40 1
TAIR|locus:2171489 - symbol:HAT2 species:3702 "Arabidopsi... 429 2.6e-40 1
TAIR|locus:2129061 - symbol:HAT1 species:3702 "Arabidopsi... 410 2.6e-38 1
TAIR|locus:2049614 - symbol:HB17 "homeobox-leucine zipper... 330 7.9e-30 1
TAIR|locus:2013980 - symbol:HB18 "homeobox-leucine zipper... 308 1.7e-27 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 181 2.2e-13 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 180 1.8e-12 1
TAIR|locus:2102107 - symbol:HB20 "homeobox protein 20" sp... 164 2.3e-10 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 159 2.8e-10 1
TAIR|locus:2040520 - symbol:HB22 "homeobox protein 22" sp... 143 1.1e-09 1
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 157 2.6e-09 1
TAIR|locus:2041283 - symbol:HB6 "homeobox protein 6" spec... 150 1.8e-08 1
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 148 2.0e-08 1
TAIR|locus:2046263 - symbol:HB21 "homeobox protein 21" sp... 143 2.8e-08 1
TAIR|locus:2168225 - symbol:HB5 "homeobox protein 5" spec... 146 5.5e-08 1
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 141 1.2e-07 1
TAIR|locus:2140055 - symbol:HB16 "homeobox protein 16" sp... 142 1.4e-07 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 137 2.5e-07 1
TAIR|locus:2154724 - symbol:HB52 "homeobox protein 52" sp... 117 9.2e-07 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 129 1.7e-06 1
RGD|3116 - symbol:Msx2 "msh homeobox 2" species:10116 "Ra... 101 0.00011 1
UNIPROTKB|P52953 - symbol:Msx2 "Homeobox protein MSX-2" s... 101 0.00011 1
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 122 0.00017 1
UNIPROTKB|D6RAR5 - symbol:D6RAR5 "Uncharacterized protein... 95 0.00025 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 111 0.00033 1
ZFIN|ZDB-GENE-040718-149 - symbol:meox1 "mesenchyme homeo... 112 0.00034 1
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 116 0.00065 1
UNIPROTKB|F1NE15 - symbol:LOC100858551 "Uncharacterized p... 91 0.00070 1
UNIPROTKB|H9L2H7 - symbol:Gga.20677 "Uncharacterized prot... 91 0.00070 1
UNIPROTKB|H9L2H8 - symbol:Gga.20677 "Uncharacterized prot... 91 0.00070 1
UNIPROTKB|P24341 - symbol:HOXD10 "Homeobox protein Hox-D1... 91 0.00070 1
UNIPROTKB|H9KZ47 - symbol:HOXB7 "Uncharacterized protein"... 100 0.00078 1
UNIPROTKB|P24340 - symbol:HOXD9 "Homeobox protein Hox-D9"... 90 0.00091 1
ZFIN|ZDB-GENE-050417-97 - symbol:dmbx1b "diencephalon/mes... 111 0.00093 1
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 105/143 (73%), Positives = 115/143 (80%)
Query: 208 RASNDNNNEVVDGCSELEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXX 267
RASN++N +DENG STRKKLRLSK QSAFLE+SFKEH+TL P
Sbjct: 175 RASNEDN----------DDENG-STRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQ 223
Query: 268 XNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTAG 327
NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCE+LTEENRRLQKE++ELR LK++
Sbjct: 224 LNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTST- 282
Query: 328 NNPFYMQLPATTLTMCPSCERVA 350
PFYMQLPATTLTMCPSCERVA
Sbjct: 283 --PFYMQLPATTLTMCPSCERVA 303
>TAIR|locus:2137599 [details] [associations]
symbol:HAT22 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009735 EMBL:AL035709
EMBL:AL161592 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:U09336 EMBL:U09337 EMBL:AJ441254 EMBL:BT002318 EMBL:AY087563
EMBL:M90417 IPI:IPI00522748 PIR:T06026 RefSeq:NP_195493.1
UniGene:At.23912 ProteinModelPortal:P46604 SMR:P46604 IntAct:P46604
EnsemblPlants:AT4G37790.1 GeneID:829935 KEGG:ath:AT4G37790
GeneFarm:3981 TAIR:At4g37790 eggNOG:NOG259949 InParanoid:P46604
OMA:TTERVVC PhylomeDB:P46604 ProtClustDB:CLSN2683864
Genevestigator:P46604 GermOnline:AT4G37790 Uniprot:P46604
Length = 278
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 96/152 (63%), Positives = 112/152 (73%)
Query: 202 SCGDIFRASNDNNNEVVDGCSEL----EDENGCSTRKKLRLSKQQSAFLEESFKEHTTLT 257
S GD + + VV CS + +DE G S RKKLRL+KQQSA LE++FK H+TL
Sbjct: 92 SGGDGEEEAEETTERVV--CSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLN 149
Query: 258 PXXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQ 317
P NLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRLQKELQ
Sbjct: 150 PKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQ 209
Query: 318 ELRALKSTAGNNPFYMQLPATTLTMCPSCERV 349
+L+ALK + PFYM +PA TLTMCPSCER+
Sbjct: 210 DLKALKLS---QPFYMHMPAATLTMCPSCERL 238
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 89/125 (71%), Positives = 100/125 (80%)
Query: 225 EDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRA 284
EDE G S RKKLRL+KQQSA LEESFK+H+TL P NLRPRQVEVWFQNRRA
Sbjct: 104 EDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRA 163
Query: 285 RTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTAGNNPFYMQLPATTLTMCP 344
RTKLKQTEVDCE+LK+CCETL +EN RLQKE+QEL+ LK T PFYM +PA+TLT CP
Sbjct: 164 RTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLT---QPFYMHMPASTLTKCP 220
Query: 345 SCERV 349
SCER+
Sbjct: 221 SCERI 225
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 91/153 (59%), Positives = 107/153 (69%)
Query: 199 IRKSCGDIFRASNDNNNEVVDGCSELEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTP 258
+ S G D + + G S+ DE+G ++RKKLRLSK QSA LEE+FK+H+TL P
Sbjct: 96 VSSSTGKRSEREEDTDPQGSRGISD--DEDGDNSRKKLRLSKDQSAILEETFKDHSTLNP 153
Query: 259 XXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQE 318
LR RQVEVWFQNRRARTKLKQTEVDCE+L+RCCE LTEENRRLQKE+ E
Sbjct: 154 KQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTE 213
Query: 319 LRALKSTAGNNPFYMQL-PATTLTMCPSCERVA 350
LRALK + FYM + P TTLTMCPSCE V+
Sbjct: 214 LRALKLSP---QFYMHMSPPTTLTMCPSCEHVS 243
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 90/133 (67%), Positives = 100/133 (75%)
Query: 220 GCSELEDE-NGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVW 278
G S+ ED NG +RKKLRLSK Q+ LEE+FKEH+TL P NLR RQVEVW
Sbjct: 148 GGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVW 207
Query: 279 FQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTAGNNPFYMQL-PA 337
FQNRRARTKLKQTEVDCEYLKRCC+ LTEENRRLQKE+ ELRALK + YM + P
Sbjct: 208 FQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLSPH---LYMHMTPP 264
Query: 338 TTLTMCPSCERVA 350
TTLTMCPSCERV+
Sbjct: 265 TTLTMCPSCERVS 277
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 91/135 (67%), Positives = 102/135 (75%)
Query: 220 GCSELEDENGC---STRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVE 276
G S+ ED +G S+RKKLRLSK+Q+ LEE+FKEH+TL P NLR RQVE
Sbjct: 145 GGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVE 204
Query: 277 VWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTAGNNPFYMQL- 335
VWFQNRRARTKLKQTEVDCEYLKRCCE LT+ENRRLQKE+ ELRALK + YM +
Sbjct: 205 VWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPH---LYMHMK 261
Query: 336 PATTLTMCPSCERVA 350
P TTLTMCPSCERVA
Sbjct: 262 PPTTLTMCPSCERVA 276
>TAIR|locus:2171489 [details] [associations]
symbol:HAT2 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=IEP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009641 "shade avoidance"
evidence=IEP] InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0009734
GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826 KO:K09338
HOGENOM:HOG000241612 GO:GO:0009641 EMBL:AB018117
ProtClustDB:CLSN2685891 EMBL:AB067629 EMBL:AJ431183 EMBL:AF428450
EMBL:AY052324 EMBL:AY061904 EMBL:U09335 IPI:IPI00526064 PIR:T52368
RefSeq:NP_199548.1 UniGene:At.25127 ProteinModelPortal:P46601
SMR:P46601 IntAct:P46601 STRING:P46601 EnsemblPlants:AT5G47370.1
GeneID:834784 KEGG:ath:AT5G47370 GeneFarm:3986 TAIR:At5g47370
eggNOG:NOG256142 InParanoid:P46601 OMA:IPINPWA PhylomeDB:P46601
Genevestigator:P46601 GermOnline:AT5G47370 Uniprot:P46601
Length = 283
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 92/147 (62%), Positives = 104/147 (70%)
Query: 210 SNDNNNEVVD------GCSELEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXX 263
S D+++E+ G S+ E++ G ++RKKLRLSK QSAFLEE+FKEH TL P
Sbjct: 100 SGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLA 159
Query: 264 XXXXXNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALK 323
NL RQVEVWFQNRRARTKLKQTEVDCEYLKRC E LTEENRRLQKE ELR LK
Sbjct: 160 LAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLK 219
Query: 324 STAGNNPFYMQL-PATTLTMCPSCERV 349
+ FY Q+ P TTL MCPSCERV
Sbjct: 220 LSP---QFYGQMTPPTTLIMCPSCERV 243
>TAIR|locus:2129061 [details] [associations]
symbol:HAT1 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003006
"developmental process involved in reproduction" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010582 "floral
meristem determinacy" evidence=IGI] [GO:0043621 "protein
self-association" evidence=IPI] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0048507 "meristem development" evidence=IGI]
[GO:0080127 "fruit septum development" evidence=IGI]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010582
EMBL:Z97343 GO:GO:0000976 KO:K09338 HOGENOM:HOG000241612
eggNOG:KOG0483 EMBL:AL161546 EMBL:U09332 EMBL:U09333 EMBL:AJ441252
EMBL:BT005756 EMBL:BT006112 EMBL:AY087322 EMBL:AK228587
IPI:IPI00538010 PIR:B71444 RefSeq:NP_193476.1 UniGene:At.19738
ProteinModelPortal:P46600 SMR:P46600 EnsemblPlants:AT4G17460.1
GeneID:827457 KEGG:ath:AT4G17460 GeneFarm:3979 TAIR:At4g17460
InParanoid:P46600 OMA:LMCPSCE PhylomeDB:P46600
ProtClustDB:CLSN2685891 Genevestigator:P46600 GermOnline:AT4G17460
GO:GO:0080127 GO:GO:0048467 Uniprot:P46600
Length = 282
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 91/150 (60%), Positives = 102/150 (68%)
Query: 203 CGDIFRASNDNNNEVVDGCSELEDENGCST-RKKLRLSKQQSAFLEESFKEHTTLTPXXX 261
CGD + D ++ G S+ E++ G T RKKLRLSK QSA LE++FKEH TL P
Sbjct: 105 CGDDLDITLDRSSS--RGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQK 162
Query: 262 XXXXXXXNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRA 321
L RQVEVWFQNRRARTKLKQTEVDCEYLKRC E LTEENRRL+KE ELRA
Sbjct: 163 LALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRA 222
Query: 322 LKSTAGNNPFYMQL-PATTLTMCPSCERVA 350
LK + Y Q+ P TTL MCPSCERVA
Sbjct: 223 LKLSPR---LYGQMSPPTTLLMCPSCERVA 249
>TAIR|locus:2049614 [details] [associations]
symbol:HB17 "homeobox-leucine zipper protein 17"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 EMBL:AJ431181
EMBL:AC005560 IPI:IPI00540169 PIR:F84424 RefSeq:NP_178252.2
UniGene:At.42490 HSSP:P01366 ProteinModelPortal:Q8S9N6 SMR:Q8S9N6
PRIDE:Q8S9N6 EnsemblPlants:AT2G01430.1 GeneID:814671
KEGG:ath:AT2G01430 GeneFarm:3960 TAIR:At2g01430 eggNOG:NOG248755
HOGENOM:HOG000241612 InParanoid:Q8S9N6 OMA:PRCERIT PhylomeDB:Q8S9N6
ProtClustDB:CLSN2917976 Genevestigator:Q8S9N6 GermOnline:AT2G01430
Uniprot:Q8S9N6
Length = 275
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 71/133 (53%), Positives = 91/133 (68%)
Query: 219 DGCSE--LEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVE 276
DG E D+ RKKLRL+++QS LE+SF+++ TL P LRPRQ+E
Sbjct: 122 DGDDEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAKHLMLRPRQIE 181
Query: 277 VWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTAGNNPFYMQLP 336
VWFQNRRAR+KLKQTE++CEYLKR +LTEEN RL +E++ELRA+K G P +
Sbjct: 182 VWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEELRAMK--VG--PTTVN-S 236
Query: 337 ATTLTMCPSCERV 349
A++LTMCP CERV
Sbjct: 237 ASSLTMCPRCERV 249
>TAIR|locus:2013980 [details] [associations]
symbol:HB18 "homeobox-leucine zipper protein 18"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AC008148 EMBL:AK118149 EMBL:BT005594 EMBL:AK175837
EMBL:AK175965 IPI:IPI00520212 RefSeq:NP_177248.3 UniGene:At.35255
HSSP:Q6B2C0 ProteinModelPortal:Q8GXM7 SMR:Q8GXM7
EnsemblPlants:AT1G70920.1 GeneID:843431 KEGG:ath:AT1G70920
GeneFarm:3959 TAIR:At1g70920 eggNOG:NOG312506 InParanoid:Q8GXM7
OMA:HTEMECE PhylomeDB:Q8GXM7 ProtClustDB:CLSN2918454
Genevestigator:Q8GXM7 GermOnline:AT1G70920 Uniprot:Q8GXM7
Length = 206
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 69/126 (54%), Positives = 84/126 (66%)
Query: 225 EDEN-GCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRR 283
+D N G RKKLRL+K+QS LEESF ++ TLTP L RQVEVWFQNRR
Sbjct: 59 DDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRR 118
Query: 284 ARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTAGNNPFYMQLPATTLTMC 343
AR+KLK TE++CEYLKR +L E+NRRLQ E++ELRALK ++ + LTMC
Sbjct: 119 ARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPSS----------TSALTMC 168
Query: 344 PSCERV 349
P CERV
Sbjct: 169 PRCERV 174
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 181 (68.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 41/104 (39%), Positives = 58/104 (55%)
Query: 218 VDGCSELEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEV 277
++G E D+ KK RL+ +Q LE+ F+ L L+PRQ+ +
Sbjct: 55 MNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAI 114
Query: 278 WFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRA 321
WFQNRRAR+K KQ E D + LKR E+L +EN LQ + Q+L+A
Sbjct: 115 WFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQA 158
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 180 (68.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 45/121 (37%), Positives = 62/121 (51%)
Query: 201 KSCGDIFRASNDNNNEVVDGCSELEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXX 260
+ C D+ +N N E + D+ KK RL+ +Q LE++F+ L P
Sbjct: 58 EGCCDLETGNNMNGEE------DYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPER 111
Query: 261 XXXXXXXXNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR 320
L+PRQ+ +WFQNRRAR K KQ E D + LKR +TL EN LQ Q+L+
Sbjct: 112 KMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQ 171
Query: 321 A 321
A
Sbjct: 172 A 172
>TAIR|locus:2102107 [details] [associations]
symbol:HB20 "homeobox protein 20" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:AC008261 EMBL:AK228890 EMBL:BT029221
EMBL:AY087631 IPI:IPI00546192 RefSeq:NP_186771.1 UniGene:At.41313
HSSP:P14859 ProteinModelPortal:Q8LAT0 SMR:Q8LAT0 IntAct:Q8LAT0
PaxDb:Q8LAT0 PRIDE:Q8LAT0 EnsemblPlants:AT3G01220.1 GeneID:821232
KEGG:ath:AT3G01220 GeneFarm:3967 TAIR:At3g01220 eggNOG:NOG328135
InParanoid:Q8LAT0 OMA:SDINLEM PhylomeDB:Q8LAT0
ProtClustDB:CLSN2684985 Genevestigator:Q8LAT0 Uniprot:Q8LAT0
Length = 286
Score = 164 (62.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 45/124 (36%), Positives = 66/124 (53%)
Query: 212 DNNNEVVDGCSELEDENGCST---RKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXX 268
+++N+ +D L D+ G T KK RL +Q LE+SF+ L P
Sbjct: 64 EDHNQTLDE-ENLSDD-GAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKAL 121
Query: 269 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRL----QKELQELRALKS 324
++PRQ+ +WFQNRRAR K +Q E D + LK+ E+L +N L +K L E+ ALK+
Sbjct: 122 GMQPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKN 181
Query: 325 TAGN 328
N
Sbjct: 182 KECN 185
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 159 (61.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 234 KKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTEV 293
KK RL+ Q A LE SF+E L L+PRQ+ VWFQNRRAR K KQ E
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 294 DCEYLKRCCETLTEENRRLQKELQELRALKSTAG 327
+ L++ + ++ E + L E+++LRAL G
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQG 170
>TAIR|locus:2040520 [details] [associations]
symbol:HB22 "homeobox protein 22" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006919 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
EMBL:AC006282 EMBL:DQ056569 IPI:IPI00527137 PIR:E84782
RefSeq:NP_850266.1 UniGene:At.53052 ProteinModelPortal:Q4PSR7
SMR:Q4PSR7 EnsemblPlants:AT2G36610.1 GeneID:818233
KEGG:ath:AT2G36610 GeneFarm:3964 TAIR:At2g36610 eggNOG:NOG297545
InParanoid:Q4PSR7 OMA:MEYWSSS PhylomeDB:Q4PSR7
ProtClustDB:CLSN2918190 Genevestigator:Q4PSR7 GermOnline:AT2G36610
Uniprot:Q4PSR7
Length = 185
Score = 143 (55.4 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 228 NGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXX--------XXXXNLRPRQVEVWF 279
NG +KK +++ +Q FLE SF+E L P L+PRQ+ VWF
Sbjct: 66 NG-QEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWF 124
Query: 280 QNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRAL 322
QNR+AR K KQ E E L++ + ++ E LQ+EL +L+++
Sbjct: 125 QNRKARWKNKQLEHLYESLRQEFDIVSREKELLQEELIQLKSM 167
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 157 (60.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 45/120 (37%), Positives = 61/120 (50%)
Query: 210 SNDNNNEVVDGCSELEDENGCST--RKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXX 267
+N N+ + V L D+ KK RL+ +Q LE+SF+ L P
Sbjct: 89 NNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKA 148
Query: 268 XNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRL---QKELQ-ELRALK 323
L+PRQ+ +WFQNRRAR K KQ E D + LK+ + L +N L K+L EL ALK
Sbjct: 149 LGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALK 208
>TAIR|locus:2041283 [details] [associations]
symbol:HB6 "homeobox protein 6" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=TAS] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0009269 "response to desiccation"
evidence=RCA] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009738 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009788
EMBL:AC006592 GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2685900 EMBL:X67034 EMBL:AY060569 EMBL:AY063819
EMBL:AY094457 EMBL:AY122903 EMBL:AF104900 IPI:IPI00548532
PIR:E84612 PIR:S47136 RefSeq:NP_565536.1 UniGene:At.25257
ProteinModelPortal:P46668 SMR:P46668 STRING:P46668
EnsemblPlants:AT2G22430.1 GeneID:816775 KEGG:ath:AT2G22430
GeneFarm:3962 TAIR:At2g22430 eggNOG:NOG255500 InParanoid:P46668
OMA:ESDISVK PhylomeDB:P46668 Genevestigator:P46668
GermOnline:AT2G22430 Uniprot:P46668
Length = 311
Score = 150 (57.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 45/129 (34%), Positives = 63/129 (48%)
Query: 200 RKSCGDIFRASNDNNNEVVDGCSELEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPX 259
R+ G F++ + E + E G S +K+ RLS Q LE++F+ L P
Sbjct: 29 RRYGGREFQSMLEGYEEEEEAIVEERGHVGLSEKKR-RLSINQVKALEKNFELENKLEPE 87
Query: 260 XXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKE---- 315
L+PRQV VWFQNRRAR K KQ E D LK ++L L+++
Sbjct: 88 RKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESL 147
Query: 316 LQELRALKS 324
LQE+ LK+
Sbjct: 148 LQEISKLKT 156
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 148 (57.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 35/88 (39%), Positives = 46/88 (52%)
Query: 234 KKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTEV 293
KK RL+ +Q LE+SF+ L P L+PRQV VWFQNRRAR K KQ E
Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127
Query: 294 DCEYLKRCCETLTEENRRLQKELQELRA 321
D + LK + L + + +LR+
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRS 155
>TAIR|locus:2046263 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006950 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 KO:K09338 HSSP:P01366 EMBL:AC006135
EMBL:BT031362 IPI:IPI00520845 PIR:F84565 RefSeq:NP_179445.1
UniGene:At.52810 ProteinModelPortal:Q9ZU70 SMR:Q9ZU70
EnsemblPlants:AT2G18550.1 GeneID:816370 KEGG:ath:AT2G18550
GeneFarm:3961 TAIR:At2g18550 eggNOG:NOG270330 HOGENOM:HOG000034122
InParanoid:Q9ZU70 OMA:RVEDEYT PhylomeDB:Q9ZU70
ProtClustDB:CLSN2683051 ArrayExpress:Q9ZU70 Genevestigator:Q9ZU70
GermOnline:AT2G18550 Uniprot:Q9ZU70
Length = 220
Score = 143 (55.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 39/97 (40%), Positives = 48/97 (49%)
Query: 225 EDEN-GCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRR 283
E EN G +K +LS +Q LE SF++ L L PRQV VWFQNRR
Sbjct: 51 EGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRR 110
Query: 284 ARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR 320
AR K K+ E + LK ET E RL E+ L+
Sbjct: 111 ARWKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLK 147
>TAIR|locus:2168225 [details] [associations]
symbol:HB5 "homeobox protein 5" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009787
"regulation of abscisic acid mediated signaling pathway"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP;IDA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=TAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0042803
GO:GO:0009738 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB011479 GO:GO:0000976
HOGENOM:HOG000006025 EMBL:X67033 EMBL:AF325054 EMBL:AY074293
EMBL:AY091340 IPI:IPI00526581 PIR:S47135 RefSeq:NP_201334.1
UniGene:At.19698 UniGene:At.67842 ProteinModelPortal:P46667
SMR:P46667 STRING:P46667 EnsemblPlants:AT5G65310.1 GeneID:836656
KEGG:ath:AT5G65310 GeneFarm:3988 TAIR:At5g65310 eggNOG:NOG325574
InParanoid:P46667 OMA:PTSELAF PhylomeDB:P46667
ProtClustDB:CLSN2686460 Genevestigator:P46667 Uniprot:P46667
Length = 312
Score = 146 (56.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 46/139 (33%), Positives = 68/139 (48%)
Query: 204 GDIFRASNDNNN--EVVDGCSELEDENGC----ST--RKKLRLSKQQSAFLEESFKEHTT 255
G ++ + D + + ++ LED G ST KK RL +Q LE++F+
Sbjct: 34 GFLYSGAGDYSQMFDALEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNK 93
Query: 256 LTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTEVDC-------EYLKRCCETLTEE 308
L P L+PRQV +WFQNRRAR K KQ E D + LKR ++L +
Sbjct: 94 LEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRD 153
Query: 309 NRRLQKELQELRALKSTAG 327
N L +++EL+A + G
Sbjct: 154 NDSLLGQIKELKAKLNVEG 172
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 141 (54.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 32/83 (38%), Positives = 43/83 (51%)
Query: 237 RLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTEVDCE 296
R S +Q LE F+ T L P L+PRQV +WFQN+RAR K KQ E +
Sbjct: 35 RFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETEYN 94
Query: 297 YLKRCCETLTEENRRLQKELQEL 319
L++ + L + L+KE Q L
Sbjct: 95 ILRQNYDNLASQFESLKKEKQAL 117
>TAIR|locus:2140055 [details] [associations]
symbol:HB16 "homeobox protein 16" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] [GO:0048510 "regulation of
timing of transition from vegetative to reproductive phase"
evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0030308
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048510 GO:GO:0048573
EMBL:AL161596 GO:GO:0000976 EMBL:AL035708 KO:K09338
HOGENOM:HOG000006025 EMBL:AF076641 EMBL:AF370620 EMBL:AY054571
EMBL:AY128917 IPI:IPI00531709 PIR:G85474 PIR:T06112
RefSeq:NP_195716.1 UniGene:At.20863 ProteinModelPortal:Q940J1
SMR:Q940J1 PaxDb:Q940J1 PRIDE:Q940J1 EnsemblPlants:AT4G40060.1
GeneID:830169 KEGG:ath:AT4G40060 GeneFarm:3982 TAIR:At4g40060
eggNOG:NOG321520 InParanoid:Q940J1 OMA:CDSSAVL PhylomeDB:Q940J1
ProtClustDB:CLSN2685900 Genevestigator:Q940J1 Uniprot:Q940J1
Length = 294
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/117 (34%), Positives = 58/117 (49%)
Query: 212 DNNNEVVDGCSELEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLR 271
D + +++ S G S +K+ RL Q LE++F+ L P L+
Sbjct: 38 DEDATLIEEYSGNHHHMGLSEKKR-RLKVDQVKALEKNFELENKLEPERKTKLAQELGLQ 96
Query: 272 PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKE----LQELRALKS 324
PRQV VWFQNRRAR K KQ E D LK ++L L+++ LQE+ +K+
Sbjct: 97 PRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKA 153
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 137 (53.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 39/116 (33%), Positives = 56/116 (48%)
Query: 204 GDIFRASNDNNNEVVDGCSELEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXX 263
GD F N +E+ G + + + S +K R S++Q LE F+ T L P
Sbjct: 4 GDFF---NCCFSEISSGMTMNKKKMKKSNNQK-RFSEEQIKSLELIFESETRLEPRKKVQ 59
Query: 264 XXXXXNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQEL 319
L+PRQV +WFQN+RAR K KQ E + L+ L + ++KE Q L
Sbjct: 60 VARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSL 115
>TAIR|locus:2154724 [details] [associations]
symbol:HB52 "homeobox protein 52" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009637 "response
to blue light" evidence=IEP] [GO:0009646 "response to absence of
light" evidence=IEP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0009637
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009646 EMBL:AB007644
EMBL:BT015927 EMBL:BT021920 EMBL:AK229211 IPI:IPI00520413
RefSeq:NP_200209.1 UniGene:At.29523 ProteinModelPortal:Q9FN29
SMR:Q9FN29 EnsemblPlants:AT5G53980.1 GeneID:835481
KEGG:ath:AT5G53980 GeneFarm:3987 TAIR:At5g53980 eggNOG:NOG240187
HOGENOM:HOG000029156 InParanoid:Q9FN29 OMA:DELYACF PhylomeDB:Q9FN29
ProtClustDB:CLSN2916425 Genevestigator:Q9FN29 GermOnline:AT5G53980
Uniprot:Q9FN29
Length = 156
Score = 117 (46.2 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 224 LEDENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRR 283
+E+ KK RL++ Q LE+ F + L P L RQV VWFQN+R
Sbjct: 1 MENSQSQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKR 60
Query: 284 ARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR 320
AR K + EV L+ E + +L+ ++Q L+
Sbjct: 61 ARFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQ 97
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 129 (50.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 32/94 (34%), Positives = 47/94 (50%)
Query: 227 ENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRART 286
+ G +K +L+ +Q LE SF + L L PRQV VWFQNRRAR
Sbjct: 48 DGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARW 107
Query: 287 KLKQTEVDCEYLKRCCETLTEENRRLQKELQELR 320
K K+ E + LK + + + RL+ E+ +L+
Sbjct: 108 KNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLK 141
>RGD|3116 [details] [associations]
symbol:Msx2 "msh homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000989 "transcription factor binding transcription
factor activity" evidence=IEA;ISO] [GO:0001503 "ossification"
evidence=ISO] [GO:0001649 "osteoblast differentiation"
evidence=ISO;ISS] [GO:0002063 "chondrocyte development"
evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;IEP;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003198 "epithelial to mesenchymal
transition involved in endocardial cushion formation"
evidence=IEA;ISO] [GO:0003416 "endochondral bone growth"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription factor
complex" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA;ISO] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA;ISO]
[GO:0030326 "embryonic limb morphogenesis" evidence=ISO] [GO:0030509
"BMP signaling pathway" evidence=ISO] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=IEA;ISO] [GO:0032792
"negative regulation of CREB transcription factor activity"
evidence=IEA;ISO] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA;ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035313 "wound healing, spreading of epidermal
cells" evidence=IEA;ISO] [GO:0035880 "embryonic nail plate
morphogenesis" evidence=IEA;ISO] [GO:0042060 "wound healing"
evidence=ISO] [GO:0042476 "odontogenesis" evidence=ISO] [GO:0042640
"anagen" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO;ISS] [GO:0045599 "negative
regulation of fat cell differentiation" evidence=IEA;ISO] [GO:0045617
"negative regulation of keratinocyte differentiation"
evidence=IEA;ISO] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0048863 "stem
cell differentiation" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=ISO;IMP] [GO:0051795 "positive regulation of
catagen" evidence=IEA;ISO] [GO:0060346 "bone trabecula formation"
evidence=IEA;ISO] [GO:0060349 "bone morphogenesis" evidence=ISO]
[GO:0060364 "frontal suture morphogenesis" evidence=IEA;ISO]
[GO:0060444 "branching involved in mammary gland duct morphogenesis"
evidence=IEA;ISO] [GO:0061180 "mammary gland epithelium development"
evidence=ISO] [GO:0061312 "BMP signaling pathway involved in heart
development" evidence=IEA;ISO] [GO:0070166 "enamel mineralization"
evidence=IEA;ISO] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEA;ISO] [GO:0071392 "cellular response to
estradiol stimulus" evidence=IEA;ISO] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116 GO:GO:0005737
GO:GO:0045892 GO:GO:0043066 GO:GO:0008285 GO:GO:0071363 GO:GO:0009952
GO:GO:0048863 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000978 GO:GO:0000122
GO:GO:0043065 GO:GO:0000982 GO:GO:0002076 GO:GO:0030513 GO:GO:0035313
GO:GO:0051216 GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989 GO:GO:0023019
GO:GO:0060444 GO:GO:0002063 GO:GO:0060346 GO:GO:0032792 GO:GO:0003416
GO:GO:0003148 GO:GO:0003198 GO:GO:2000678 GO:GO:0060364
eggNOG:NOG298790 HOGENOM:HOG000231922 OrthoDB:EOG4HQDK0 GO:GO:0045617
GO:GO:0061312 GO:GO:0035880 GO:GO:0051795 EMBL:U12514 IPI:IPI00231048
UniGene:Rn.10414 ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 33/119 (27%), Positives = 51/119 (42%)
Query: 232 TRKKLR--LSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLK 289
T +K R + Q LE F++ L+ NL QV++WFQNRRA+ K
Sbjct: 13 TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRL 72
Query: 290 QTEVDCEYLKRCCETLTEENRRLQKELQE-LRALKSTAGNNPFY---MQLPATTLTMCP 344
Q E + E LK + + L + L+A + + PF+ + +P L P
Sbjct: 73 Q-EAELEKLKMAAKPMLPSGFSLPFPINSPLQAASIYSASYPFHRPVLPIPPVGLYATP 130
>UNIPROTKB|P52953 [details] [associations]
symbol:Msx2 "Homeobox protein MSX-2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000989
"transcription factor binding transcription factor activity"
evidence=IEA] [GO:0002063 "chondrocyte development" evidence=IEA]
[GO:0003148 "outflow tract septum morphogenesis" evidence=IEA]
[GO:0003198 "epithelial to mesenchymal transition involved in
endocardial cushion formation" evidence=IEA] [GO:0003416
"endochondral bone growth" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=IEA] [GO:0032792 "negative regulation of CREB
transcription factor activity" evidence=IEA] [GO:0035115 "embryonic
forelimb morphogenesis" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035880 "embryonic
nail plate morphogenesis" evidence=IEA] [GO:0042640 "anagen"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IEA] [GO:0045617 "negative regulation of
keratinocyte differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0048863
"stem cell differentiation" evidence=IEA] [GO:0051795 "positive
regulation of catagen" evidence=IEA] [GO:0060346 "bone trabecula
formation" evidence=IEA] [GO:0060364 "frontal suture morphogenesis"
evidence=IEA] [GO:0060444 "branching involved in mammary gland duct
morphogenesis" evidence=IEA] [GO:0061312 "BMP signaling pathway
involved in heart development" evidence=IEA] [GO:0070166 "enamel
mineralization" evidence=IEA] [GO:0071363 "cellular response to
growth factor stimulus" evidence=IEA] [GO:0071392 "cellular
response to estradiol stimulus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:3116
GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0008285
GO:GO:0071363 GO:GO:0009952 GO:GO:0048863 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0000978 GO:GO:0000122 GO:GO:0043065 GO:GO:0000982
GO:GO:0002076 GO:GO:0030513 GO:GO:0035313 GO:GO:0051216
GO:GO:0045669 GO:GO:0045599 GO:GO:0035116 GO:GO:0042640
GO:GO:0035115 GO:GO:0070166 GO:GO:0071392 GO:GO:0000989
GO:GO:0023019 GO:GO:0060444 GO:GO:0002063 GO:GO:0060346
GO:GO:0032792 GO:GO:0003416 GO:GO:0003148 GO:GO:0003198
GO:GO:2000678 GO:GO:0060364 eggNOG:NOG298790 HOGENOM:HOG000231922
OrthoDB:EOG4HQDK0 GO:GO:0045617 GO:GO:0061312 GO:GO:0035880
GO:GO:0051795 EMBL:U12514 IPI:IPI00231048 UniGene:Rn.10414
ProteinModelPortal:P52953 SMR:P52953 STRING:P52953
HOVERGEN:HBG066288 InParanoid:P52953 Genevestigator:P52953
GermOnline:ENSRNOG00000018355 Uniprot:P52953
Length = 139
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 33/119 (27%), Positives = 51/119 (42%)
Query: 232 TRKKLR--LSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLK 289
T +K R + Q LE F++ L+ NL QV++WFQNRRA+ K
Sbjct: 13 TNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRL 72
Query: 290 QTEVDCEYLKRCCETLTEENRRLQKELQE-LRALKSTAGNNPFY---MQLPATTLTMCP 344
Q E + E LK + + L + L+A + + PF+ + +P L P
Sbjct: 73 Q-EAELEKLKMAAKPMLPSGFSLPFPINSPLQAASIYSASYPFHRPVLPIPPVGLYATP 130
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 269 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCET----LTEENRRLQKELQELRALKS 324
N+ P+Q++VWFQNRR R K ++ + + R L EEN RLQK++ +L
Sbjct: 64 NIEPKQIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQL----- 118
Query: 325 TAGNNPFYMQLPATTLTMCPSCERV 349
N YM+ TT+ PSCE V
Sbjct: 119 VCENG--YMKQQLTTVVNDPSCESV 141
>UNIPROTKB|D6RAR5 [details] [associations]
symbol:D6RAR5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 EMBL:AC004080
HOGENOM:HOG000294138 IPI:IPI00382764 ProteinModelPortal:D6RAR5
SMR:D6RAR5 Ensembl:ENST00000470747 Uniprot:D6RAR5
Length = 112
Score = 95 (38.5 bits), Expect = 0.00025, P = 0.00025
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 231 STRKK-LRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTK 287
STRKK +K Q+ LE+ F + LT NL RQV++WFQNRR + K
Sbjct: 45 STRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 102
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 111 (44.1 bits), Expect = 0.00033, P = 0.00033
Identities = 34/100 (34%), Positives = 47/100 (47%)
Query: 227 ENGCSTRKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRART 286
E G RK+ +L+ +Q LE SF L L PRQV VWFQNRRAR
Sbjct: 65 EIGGMLRKR-KLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARW 123
Query: 287 KLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTA 326
K K+ E + LK + + +L+ ++ +L S A
Sbjct: 124 KNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEA 163
>ZFIN|ZDB-GENE-040718-149 [details] [associations]
symbol:meox1 "mesenchyme homeobox 1" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-040718-149 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00660000095141 CTD:4222 KO:K09322 EMBL:CR847827
IPI:IPI00865440 RefSeq:NP_001002450.2 UniGene:Dr.83318
Ensembl:ENSDART00000105661 GeneID:436723 KEGG:dre:436723
NextBio:20831164 Uniprot:F1Q4R9
Length = 253
Score = 112 (44.5 bits), Expect = 0.00034, P = 0.00034
Identities = 29/85 (34%), Positives = 40/85 (47%)
Query: 205 DIFRASNDNNNEVVD-GCSELEDENGCSTRK-KLRLSKQQSAFLEESFKEHTTLTPXXXX 262
D + S+ EV D S + ++ C RK + +K+Q LE F H LT
Sbjct: 142 DTEKKSSKRKREVTDIQDSSFKADSNCKARKERTAFTKEQLRELEAEFTHHNYLTRLRRY 201
Query: 263 XXXXXXNLRPRQVEVWFQNRRARTK 287
+L RQV+VWFQNRR + K
Sbjct: 202 EIAVNLDLTERQVKVWFQNRRMKWK 226
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 116 (45.9 bits), Expect = 0.00065, P = 0.00065
Identities = 36/121 (29%), Positives = 57/121 (47%)
Query: 210 SNDNNNEVVDGCSELEDENGCSTRKKL-RLSKQQSAFLEESFKEHTTLTPXXXXXXXXXX 268
S + ++ V+ + +E E + +K+ R + Q +E FKE+
Sbjct: 67 STGSGHDPVENTA-IEQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKL 125
Query: 269 NLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTAGN 328
L P QV+ WFQN+R + K +Q+ D LK ETL E++ +Q Q L ST G+
Sbjct: 126 GLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFC--STCGH 183
Query: 329 N 329
N
Sbjct: 184 N 184
>UNIPROTKB|F1NE15 [details] [associations]
symbol:LOC100858551 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009954 "proximal/distal pattern
formation" evidence=IEA] [GO:0030879 "mammary gland development"
evidence=IEA] [GO:0035115 "embryonic forelimb morphogenesis"
evidence=IEA] [GO:0048706 "embryonic skeletal system development"
evidence=IEA] [GO:0060216 "definitive hemopoiesis" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005737 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689 GO:GO:0005667
GeneTree:ENSGT00700000104054 EMBL:AADN02000988 IPI:IPI00821899
Ensembl:ENSGALT00000018034 Uniprot:F1NE15
Length = 60
Score = 91 (37.1 bits), Expect = 0.00070, P = 0.00070
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 232 TRKK-LRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTK 287
TRKK +K Q+ LE+ F + LT NL RQV++WFQNRR + K
Sbjct: 1 TRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKIWFQNRRMKMK 57
>UNIPROTKB|H9L2H7 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035897 Uniprot:H9L2H7
Length = 95
Score = 91 (37.1 bits), Expect = 0.00070, P = 0.00070
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 233 RKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTE 292
+K+ +K Q+ LE+ F + LT NL RQV++WFQNRR + K E
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 82
>UNIPROTKB|H9L2H8 [details] [associations]
symbol:Gga.20677 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104054 EMBL:AADN02023992
Ensembl:ENSGALT00000035898 Uniprot:H9L2H8
Length = 99
Score = 91 (37.1 bits), Expect = 0.00070, P = 0.00070
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 233 RKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTE 292
+K+ +K Q+ LE+ F + LT NL RQV++WFQNRR + K E
Sbjct: 27 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSINLTDRQVKIWFQNRRMKLKKMNRE 86
>UNIPROTKB|P24341 [details] [associations]
symbol:HOXD10 "Homeobox protein Hox-D10" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479
PRINTS:PR00024 SUPFAM:SSF46689 EMBL:D10287 IPI:IPI00593695
PIR:A37914 UniGene:Gga.20677 ProteinModelPortal:P24341 SMR:P24341
eggNOG:KOG0487 Uniprot:P24341
Length = 95
Score = 91 (37.1 bits), Expect = 0.00070, P = 0.00070
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 233 RKKLRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTKLKQTE 292
+K+ +K Q+ LE+ F + LT NL RQV++WFQNRR + K E
Sbjct: 23 KKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKMSRE 82
>UNIPROTKB|H9KZ47 [details] [associations]
symbol:HOXB7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GeneTree:ENSGT00700000104090 EMBL:AADN02027109 EMBL:AADN02027110
Ensembl:ENSGALT00000004740 Uniprot:H9KZ47
Length = 147
Score = 100 (40.3 bits), Expect = 0.00078, P = 0.00078
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 228 NGCSTRKKLR--LSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRAR 285
NGC+ RK+ R ++ Q+ LE+ F + LT L RQ+++WFQNRR +
Sbjct: 62 NGCTDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 121
Query: 286 TKLKQTEVDC 295
K K+ + C
Sbjct: 122 WK-KENKTAC 130
>UNIPROTKB|P24340 [details] [associations]
symbol:HOXD9 "Homeobox protein Hox-D9" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 HOGENOM:HOG000231180 eggNOG:NOG288226
OrthoDB:EOG4SXNCJ IPI:IPI00814164 PIR:S14797 UniGene:Gga.12699
ProteinModelPortal:P24340 SMR:P24340 STRING:P24340
InParanoid:P24340 Uniprot:P24340
Length = 60
Score = 90 (36.7 bits), Expect = 0.00091, P = 0.00091
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 232 TRKK-LRLSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWFQNRRARTK 287
TRKK +K Q+ LE+ F + LT NL RQV++WFQNRR + K
Sbjct: 1 TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK 57
>ZFIN|ZDB-GENE-050417-97 [details] [associations]
symbol:dmbx1b "diencephalon/mesencephalon homeobox
1b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0050767 "regulation of neurogenesis"
evidence=IGI;IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-050417-97 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0051726 GO:GO:0060041
GO:GO:0030901 InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 GO:GO:0050767 HSSP:P06601
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OrthoDB:EOG4BCDNN EMBL:DQ317638 EMBL:BC093284 IPI:IPI00487260
RefSeq:NP_001017625.1 UniGene:Dr.91498 ProteinModelPortal:Q566X8
SMR:Q566X8 Ensembl:ENSDART00000026693 GeneID:550288 KEGG:dre:550288
CTD:550288 InParanoid:Q566X8 OMA:EDNADRE NextBio:20879549
Bgee:Q566X8 Uniprot:Q566X8
Length = 369
Score = 111 (44.1 bits), Expect = 0.00093, P = 0.00093
Identities = 41/128 (32%), Positives = 59/128 (46%)
Query: 224 LEDENGCSTRKKLR----LSKQQSAFLEESFKEHTTLTPXXXXXXXXXXNLRPRQVEVWF 279
LE G RK+ R + QQ LE++F++ NL +V+VWF
Sbjct: 55 LEARYGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWF 114
Query: 280 QNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKSTAGNNPFYMQLPATT 339
+NRRA+ + KQ + E L+R E TE + KE E +++ A +P L
Sbjct: 115 KNRRAKFRKKQRSLQKEQLQRLKEAGTEGAQDEGKE--EAPPVEAQAPPSP----LDGRG 168
Query: 340 LTMCPSCE 347
LT PSCE
Sbjct: 169 LTSAPSCE 176
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.129 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 400 263 0.00091 114 3 11 22 0.48 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 39
No. of states in DFA: 612 (65 KB)
Total size of DFA: 199 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.75u 0.15s 22.90t Elapsed: 00:00:01
Total cpu time: 22.76u 0.15s 22.91t Elapsed: 00:00:01
Start: Mon May 20 22:04:58 2013 End: Mon May 20 22:04:59 2013