BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015773
(400 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P23381|SYWC_HUMAN Tryptophan--tRNA ligase, cytoplasmic OS=Homo sapiens GN=WARS PE=1
SV=2
Length = 471
Score = 518 bits (1334), Expect = e-146, Method: Compositional matrix adjust.
Identities = 240/389 (61%), Positives = 307/389 (78%), Gaps = 5/389 (1%)
Query: 11 EEREQVVSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFF 68
E E V PW V SS+ IDYDKLI +FG ++D+ L++R++R TG+ PH FLRRG+FF
Sbjct: 79 EAEEDFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHHFLRRGIFF 138
Query: 69 AHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTD 128
+HRD+N +LDAYE + FYLYTGRGPSSEA+H+GHL+PF+FT ++LQD F VPLVIQ+TD
Sbjct: 139 SHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFT-KWLQDVFNVPLVIQMTD 197
Query: 129 DEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVG--GAFYKNMVKVAKC 186
DEK +WK+L+++++ A ENAKDIIACGFD+ KTFIFSD DY+G FYKN+VK+ K
Sbjct: 198 DEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKH 257
Query: 187 VTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYF 246
VT+N+V GIFGFT D IGK+SFP +QA PSF +SFP +F + ++CLIPCAIDQDPYF
Sbjct: 258 VTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYF 317
Query: 247 RMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
RMTRDVAPRIGY KPAL+ S+FFPALQG KMSASDPNS+I++TD+AK IK K+NK+AF
Sbjct: 318 RMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAF 377
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKV 366
SGG++++E HR+ G N +VD+ YL+FFLEDD +LE I+K+Y +G MLTGE+K+ L +V
Sbjct: 378 SGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEV 437
Query: 367 LTELVERHQVARAAVTDEMVDAFMAVRPL 395
L L+ HQ R VTDE+V FM R L
Sbjct: 438 LQPLIAEHQARRKEVTDEIVKEFMTPRKL 466
>sp|Q5R4J1|SYWC_PONAB Tryptophan--tRNA ligase, cytoplasmic OS=Pongo abelii GN=WARS PE=2
SV=2
Length = 472
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 240/389 (61%), Positives = 307/389 (78%), Gaps = 5/389 (1%)
Query: 11 EEREQVVSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFF 68
E E V PW V SS+ IDYDKLI +FG ++D+ L++R++R TG+ PH FLRRG+FF
Sbjct: 80 EAEEDFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELINRIERATGQRPHRFLRRGIFF 139
Query: 69 AHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTD 128
+HRD+N +LDAYE + FYLYTGRGPSSEA+H+GHL+PF+FT ++LQD F VPLVIQ+TD
Sbjct: 140 SHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFT-KWLQDVFNVPLVIQMTD 198
Query: 129 DEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVG--GAFYKNMVKVAKC 186
DEK +WK+L+++++ A ENAKDIIACGFD+ KTFIFSD DY+G FYKN+VK+ K
Sbjct: 199 DEKYLWKDLTLDQAYSYAVENAKDIIACGFDINKTFIFSDLDYMGMSSGFYKNVVKIQKH 258
Query: 187 VTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYF 246
VT+N+V GIFGFT D IGK+SFP +QA PSF +SFP +F + ++CLIPCAIDQDPYF
Sbjct: 259 VTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCLIPCAIDQDPYF 318
Query: 247 RMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
RMTRDVAPRIGY KPAL+ S+FFPALQG KMSASDPNS+I++TD+AK IK K+NK+AF
Sbjct: 319 RMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAF 378
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKV 366
SGG++++E HR+ G N +VD+ YL+FFLEDD +LE I+K+Y +G MLTGE+K+ L +V
Sbjct: 379 SGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEV 438
Query: 367 LTELVERHQVARAAVTDEMVDAFMAVRPL 395
L L+ HQ R VTDE+V FM R L
Sbjct: 439 LQPLIAEHQARRKEVTDEIVKEFMTPRKL 467
>sp|P23612|SYWC_RABIT Tryptophan--tRNA ligase, cytoplasmic OS=Oryctolagus cuniculus
GN=WARS PE=2 SV=3
Length = 475
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/398 (61%), Positives = 312/398 (78%), Gaps = 5/398 (1%)
Query: 2 DKNEEKQREEEREQVVSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPH 59
D + + + +++E V PW V SS+ IDYDKLI +FG ++D+ LV+R++R TG+ PH
Sbjct: 74 DSHGDPEAVDDKEDFVDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELVNRIERATGQRPH 133
Query: 60 VFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFK 119
FLRRG+FF+HRD+N +LDAYE + FYLYTGRGPSSEA+H+GHL+PF+FT ++LQD F
Sbjct: 134 RFLRRGIFFSHRDMNQVLDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFT-KWLQDVFD 192
Query: 120 VPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGA--FY 177
VPLV+Q++DDEK +WK+L++E+ ENAKDIIACGFDV KTFIFSD DY+G + FY
Sbjct: 193 VPLVVQMSDDEKYLWKDLTLEQVYGYTLENAKDIIACGFDVNKTFIFSDLDYMGMSPGFY 252
Query: 178 KNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIP 237
KN+VK+ K VT+N+V GIFGFT D IGK+SFP +QA PSF +SFP +F G+ ++CLIP
Sbjct: 253 KNVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFHGQADIQCLIP 312
Query: 238 CAIDQDPYFRMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAI 297
CAIDQDPYFRMTRDVAPRIGY KPAL+ S+FFPALQG KMSASDPNS+I++TD+AK I
Sbjct: 313 CAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQI 372
Query: 298 KNKINKYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTG 357
K K+NK+AFSGG++++E HR+ G N +VD+ YL+FFLEDD +LE I+K+Y +G MLTG
Sbjct: 373 KTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYSSGAMLTG 432
Query: 358 EVKQRLAKVLTELVERHQVARAAVTDEMVDAFMAVRPL 395
E+K+ L VL LV HQ R VTDEMV FM R L
Sbjct: 433 ELKKELIDVLQPLVAEHQARRKEVTDEMVKEFMTPRQL 470
>sp|Q6P7B0|SYWC_RAT Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Wars
PE=1 SV=2
Length = 481
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/396 (61%), Positives = 309/396 (78%), Gaps = 5/396 (1%)
Query: 4 NEEKQREEEREQVVSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVF 61
N + + E V PW V SS+ IDYDKLI +FG ++D+ L++R++R TG+ PH F
Sbjct: 76 NGDPDATKASEDFVDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELINRIERATGQRPHRF 135
Query: 62 LRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVP 121
LRRG+FF+HRD+N ILDAYE + FYLYTGRGPSSEA+HLGHLVPF+FT ++LQD F VP
Sbjct: 136 LRRGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFT-KWLQDVFDVP 194
Query: 122 LVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGA--FYKN 179
LVIQ++DDEK +WK+L++E++ ENAKDIIACGFDV KTFIFSD +Y+G + FYKN
Sbjct: 195 LVIQMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDVNKTFIFSDLEYMGQSPGFYKN 254
Query: 180 MVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCA 239
+VK+ K VT+N+V GIFGFT D IGK+SFP VQA PSF +SFP +F + ++CLIPCA
Sbjct: 255 VVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDRTDIQCLIPCA 314
Query: 240 IDQDPYFRMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKN 299
IDQDPYFRMTRDVAPRIG+ KPAL+ S+FFPALQG KMSASDPNS+I++TD+AK IK+
Sbjct: 315 IDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKS 374
Query: 300 KINKYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEV 359
K+NK+AFSGG+++VE HR+ G N EVD+ YL+FFLEDD LE I+K+Y +G MLTGE+
Sbjct: 375 KVNKHAFSGGRDTVEEHRQFGGNCEVDVSFMYLTFFLEDDDSLEQIRKDYTSGAMLTGEL 434
Query: 360 KQRLAKVLTELVERHQVARAAVTDEMVDAFMAVRPL 395
K+ L VL L+ HQ R AVT+E V FMA R L
Sbjct: 435 KKTLIDVLQPLIAEHQARRKAVTEETVKEFMAPRQL 470
>sp|P17248|SYWC_BOVIN Tryptophan--tRNA ligase, cytoplasmic OS=Bos taurus GN=WARS PE=1
SV=3
Length = 476
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 241/389 (61%), Positives = 308/389 (79%), Gaps = 5/389 (1%)
Query: 11 EEREQVVSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFF 68
E E V PW V SS+ IDYDKLI +FG ++D+ LV+R++R TG+ PH FLRRG+FF
Sbjct: 84 EADEDFVDPWTVQTSSAKGIDYDKLIVRFGSSKIDKELVNRIERATGQRPHRFLRRGIFF 143
Query: 69 AHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTD 128
+HRD++ ILDAYE + FYLYTGRGPSSEA+H+GHL+PF+FT ++LQD F VPLVIQ+TD
Sbjct: 144 SHRDMHQILDAYENKKPFYLYTGRGPSSEAMHVGHLIPFIFT-KWLQDVFNVPLVIQMTD 202
Query: 129 DEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGA--FYKNMVKVAKC 186
DEK +WK+L+++++ A ENAKDIIACGFD+ KTFIFSD DY+G + FYKN+VK+ K
Sbjct: 203 DEKYLWKDLTLDQAYGYAVENAKDIIACGFDINKTFIFSDLDYMGMSPGFYKNVVKIQKH 262
Query: 187 VTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYF 246
VT+N+V GIFGFT D IGK+SFP +QA PSF +SFP +F + ++CLIPCAIDQDPYF
Sbjct: 263 VTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDVQCLIPCAIDQDPYF 322
Query: 247 RMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
RMTRDVAPRIGY KPAL+ S+FFPALQG KMSASDPNS+I++TD+AK IK K+NK+AF
Sbjct: 323 RMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIKTKVNKHAF 382
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKV 366
SGG+++VE HR+ G N +VD+ YL+FFLEDD +LE I+++Y +G MLTGE+K+ L +V
Sbjct: 383 SGGRDTVEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRRDYTSGAMLTGELKKELIEV 442
Query: 367 LTELVERHQVARAAVTDEMVDAFMAVRPL 395
L L+ HQ R VTDE+V FM R L
Sbjct: 443 LQPLIAEHQARRKEVTDEIVKEFMTPRKL 471
>sp|P32921|SYWC_MOUSE Tryptophan--tRNA ligase, cytoplasmic OS=Mus musculus GN=Wars PE=1
SV=2
Length = 481
Score = 513 bits (1321), Expect = e-144, Method: Compositional matrix adjust.
Identities = 242/397 (60%), Positives = 309/397 (77%), Gaps = 5/397 (1%)
Query: 3 KNEEKQREEEREQVVSPWEV--SSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHV 60
+N + + E V PW V SS+ IDYDKLI +FG ++D+ L++R++R TG+ PH
Sbjct: 75 RNCDSDATKASEDFVDPWTVRTSSAKGIDYDKLIVQFGSSKIDKELINRIERATGQRPHR 134
Query: 61 FLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKV 120
FLRRG+FF+HRD+N ILDAYE + FYLYTGRGPSSEA+HLGHLVPF+FT ++LQD F V
Sbjct: 135 FLRRGIFFSHRDMNQILDAYENKKPFYLYTGRGPSSEAMHLGHLVPFIFT-KWLQDVFNV 193
Query: 121 PLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGA--FYK 178
PLVIQ++DDEK +WK+L++E++ ENAKDIIACGFD+ KTFIFSD +Y+G + FY+
Sbjct: 194 PLVIQMSDDEKYLWKDLTLEQAYSYTVENAKDIIACGFDINKTFIFSDLEYMGQSPGFYR 253
Query: 179 NMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPC 238
N+VK+ K VT+N+V GIFGFT D IGK+SFP VQA PSF +SFP +F + ++CLIPC
Sbjct: 254 NVVKIQKHVTFNQVKGIFGFTDSDCIGKISFPAVQAAPSFSNSFPKIFRDRTDIQCLIPC 313
Query: 239 AIDQDPYFRMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIK 298
AIDQDPYFRMTRDVAPRIG+ KPAL+ S+FFPALQG KMSASDPNS+I++TD+AK IK
Sbjct: 314 AIDQDPYFRMTRDVAPRIGHPKPALLHSTFFPALQGAQTKMSASDPNSSIFLTDTAKQIK 373
Query: 299 NKINKYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGE 358
+K+NK+AFSGG+++VE HR+ G N EVD+ YL+FFLEDD LE I+K+Y +G MLTGE
Sbjct: 374 SKVNKHAFSGGRDTVEEHRQFGGNCEVDVSFMYLTFFLEDDDRLEQIRKDYTSGAMLTGE 433
Query: 359 VKQRLAKVLTELVERHQVARAAVTDEMVDAFMAVRPL 395
+K+ L VL L+ HQ R AVT+E V FM R L
Sbjct: 434 LKKTLIDVLQPLIAEHQARRKAVTEETVKEFMTPRQL 470
>sp|Q55DZ8|SYWC_DICDI Tryptophan--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum
GN=trpS PE=3 SV=1
Length = 400
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 214/387 (55%), Positives = 289/387 (74%), Gaps = 8/387 (2%)
Query: 15 QVVSPWEVSSS--GKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRD 72
QV++PWEV ++ G +DY KL+D+FG + + L+ R +++TG+ H FLRRG+FF+HRD
Sbjct: 14 QVITPWEVEAAPGGSVDYMKLVDQFGSTVISEELIARFEKVTGKRAHHFLRRGIFFSHRD 73
Query: 73 LNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKC 132
L +ILD +E G+K++LYTGRGPSS +LH GHL+PF FT +YLQDAF VPLV+Q+T+DEK
Sbjct: 74 LKEILDHHESGKKWFLYTGRGPSSGSLHFGHLLPFTFT-KYLQDAFNVPLVVQMTNDEKF 132
Query: 133 MWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKV 192
+WK++++EES + N KDIIA GFD+ KTFIFS+ +Y+ Y N++K+A+CV N++
Sbjct: 133 LWKDMTLEESIKFTHNNVKDIIALGFDIQKTFIFSNLEYIH-HLYPNVLKIARCVNLNQI 191
Query: 193 VGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKD----HLRCLIPCAIDQDPYFRM 248
IFGF D IGK +FPPVQA P FP SFPH+F D ++RCLIPCAIDQDPYFRM
Sbjct: 192 QNIFGFKESDAIGKFTFPPVQAAPCFPDSFPHIFPLNDPEIKNIRCLIPCAIDQDPYFRM 251
Query: 249 TRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSG 308
TRD+A RIG+ KPALI S FFPALQG KMSASD NSA+Y++D+ +K+KI K+AFSG
Sbjct: 252 TRDIAHRIGHQKPALIHSKFFPALQGHNTKMSASDTNSAVYLSDTPDQVKDKIKKHAFSG 311
Query: 309 GQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKVLT 368
G + E K GA+L VDI +YL+F LEDD +L+ I Y G M+TGE+KQ L ++
Sbjct: 312 GGATKEEQEKNGADLSVDITYEYLTFMLEDDEQLKDIAHRYSTGKMMTGEIKQILIDLMN 371
Query: 369 ELVERHQVARAAVTDEMVDAFMAVRPL 395
+++ RH+ ARA +TDE++ FM++R L
Sbjct: 372 KIIIRHKEARAKITDEVLSTFMSIRKL 398
>sp|Q09692|SYWC_SCHPO Tryptophan--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=wrs1 PE=1 SV=1
Length = 395
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/384 (55%), Positives = 285/384 (74%), Gaps = 8/384 (2%)
Query: 14 EQVVSPWEVSSS------GKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVF 67
EQ+V+PW+V S IDY++LI +FG +++ ++R ++LTG+ PH+ LRRG F
Sbjct: 5 EQIVTPWDVKGSIVDGEEKGIDYERLIVQFGTRKITPEQLERFEKLTGKKPHLLLRRGAF 64
Query: 68 FAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLT 127
F+HRD + ILD YE+ + FYLYTGRGPSS+++HLGH++PFMF ++LQD F+VPLVIQLT
Sbjct: 65 FSHRDFDMILDRYEQKKPFYLYTGRGPSSDSMHLGHMIPFMFC-KWLQDVFQVPLVIQLT 123
Query: 128 DDEKCMWKN-LSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKC 186
DDEK ++K +S+E+ QR ARENAKDIIA GFD KTFIF + YVGGAFY+N+V++AKC
Sbjct: 124 DDEKFLFKQGVSLEDCQRFARENAKDIIAVGFDPKKTFIFMNSTYVGGAFYQNVVRIAKC 183
Query: 187 VTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYF 246
+T N+ FGFT D IGK+ F +QA PSF SSFPH+F+G + CLIPCAIDQDPYF
Sbjct: 184 ITANQSKACFGFTDSDSIGKIHFASIQAAPSFSSSFPHIFNGAKDIPCLIPCAIDQDPYF 243
Query: 247 RMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
R+TRDV+ R+ + KPAL+ S FFPALQG KMSAS +SAI++TD+ IKNKIN++AF
Sbjct: 244 RLTRDVSGRLKFKKPALLHSRFFPALQGPQSKMSASKDSSAIFMTDTPNKIKNKINRHAF 303
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKV 366
SGG ++E+HR+ G N +VD+ +YLSFFL+DD +L+ + Y AG + TGE+K K+
Sbjct: 304 SGGGATIEIHREKGGNPDVDVAYQYLSFFLDDDEKLKQLYNTYKAGTLSTGEMKGECIKL 363
Query: 367 LTELVERHQVARAAVTDEMVDAFM 390
L + V Q AR+ V + +D FM
Sbjct: 364 LQQFVSDFQAARSKVDEATLDMFM 387
>sp|Q12109|SYWC_YEAST Tryptophan--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=WRS1 PE=1 SV=1
Length = 432
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/391 (52%), Positives = 279/391 (71%), Gaps = 9/391 (2%)
Query: 13 REQVVSPWEVSS-------SGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRG 65
+EQVV+PW+V + IDYDKLI +FG + +++ + R +++TGR PH FLR+G
Sbjct: 23 KEQVVTPWDVEGGVDEQGRAQNIDYDKLIKQFGTKPVNEETLKRFKQVTGREPHHFLRKG 82
Query: 66 VFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQ 125
+FF+ RD ILD YE+G+ F+LYTGRGPSS+++HLGH++PF+FT ++LQ+ F VPLVI+
Sbjct: 83 LFFSERDFTKILDLYEQGKPFFLYTGRGPSSDSMHLGHMIPFVFT-KWLQEVFDVPLVIE 141
Query: 126 LTDDEKCMWKN-LSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVA 184
LTDDEK ++K+ L++ + + ARENAKDIIA GFD TFIFSD Y+GGAFY+ +V+V+
Sbjct: 142 LTDDEKFLFKHKLTINDVKNFARENAKDIIAVGFDPKNTFIFSDLQYMGGAFYETVVRVS 201
Query: 185 KCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDP 244
+ +T + +FGF D IGK F +Q +FPSSFP++ D CLIPCAIDQDP
Sbjct: 202 RQITGSTAKAVFGFNDSDCIGKFHFASIQIATAFPSSFPNVLGLPDKTPCLIPCAIDQDP 261
Query: 245 YFRMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKY 304
YFR+ RDVA ++ Y KPAL+ S FFPALQG T KMSASD +AI++TD+ K I+ KINKY
Sbjct: 262 YFRVCRDVADKLKYSKPALLHSRFFPALQGSTTKMSASDDTTAIFMTDTPKQIQKKINKY 321
Query: 305 AFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLA 364
AFSGGQ S +LHR+LG N +VD+ +YLSFF +DD L+ +Y +G +L+GE+K+
Sbjct: 322 AFSGGQVSADLHRELGGNPDVDVAYQYLSFFKDDDVFLKECYDKYKSGELLSGEMKKLCI 381
Query: 365 KVLTELVERHQVARAAVTDEMVDAFMAVRPL 395
+ L E V+ Q RA V +E +D FM L
Sbjct: 382 ETLQEFVKAFQERRAQVDEETLDKFMVPHKL 412
>sp|O96771|SYW_ENCCU Tryptophan--tRNA ligase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ECU11_0530 PE=1 SV=2
Length = 385
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/385 (45%), Positives = 264/385 (68%), Gaps = 11/385 (2%)
Query: 14 EQVVSPW--EVSSSGK----IDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVF 67
EQ ++PW EV S+ + IDYDK+I++FGC++ +Q+L DR+++L+G+P H F RRG+
Sbjct: 3 EQRITPWDVEVVSTDEVPVAIDYDKIINQFGCEKFNQALADRLEKLSGKPAHYFFRRGIV 62
Query: 68 FAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLT 127
FAHRD N +LD FYLYTGRGPSS+ +H+GH +PF+ +Y+QDAFK+ LVIQ+T
Sbjct: 63 FAHRDFNLLLDEIANNRPFYLYTGRGPSSKTMHIGHTIPFLLC-KYMQDAFKIRLVIQIT 121
Query: 128 DDEKCMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCV 187
DDEK +WK++ +E++ REN KDI+A GFD T+IFS+ + F +N++K++K +
Sbjct: 122 DDEKFLWKSMRLEDAMAYGRENIKDIVALGFDPKLTYIFSNVE-ASHHFEENILKISKTI 180
Query: 188 TYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFR 247
N+ + +FGF +IG+V FP + P F SSF F GK + CL+P A+DQDP+FR
Sbjct: 181 NLNEAIKVFGFDMSSNIGQVGFPAKEIAPCFSSSFR--FIGKGAM-CLVPAAVDQDPFFR 237
Query: 248 MTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFS 307
+ RD A +G KP+ I S P L+G KMSASDPNS+IY+ D+ I+ KI YA+S
Sbjct: 238 LARDKAKALGEKKPSSIYVSLLPDLKGVNRKMSASDPNSSIYLDDAQDTIRKKIIAYAYS 297
Query: 308 GGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKVL 367
GG++++E HR+ G +++VD+P +YL +FL+DD ELE + Y G + + E+K++ V+
Sbjct: 298 GGRKTLEEHREKGGDIDVDVPFEYLKYFLDDDQELEKYRSGYIKGEITSKEMKEKCVVVI 357
Query: 368 TELVERHQVARAAVTDEMVDAFMAV 392
E V R+Q +R VTD+ + AF+ +
Sbjct: 358 QEFVSRYQESRKRVTDDDLRAFIDI 382
>sp|Q4JBG7|SYW_SULAC Tryptophan--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=trpS PE=3 SV=1
Length = 381
Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/376 (46%), Positives = 243/376 (64%), Gaps = 18/376 (4%)
Query: 16 VVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLND 75
V+PWEV GK+DYDKLI +FG Q++ L +R +R HV LRR VFF+HRD +
Sbjct: 6 TVTPWEVK--GKVDYDKLIVQFGTQKMTSELKERAKRAINDELHVMLRRDVFFSHRDFDL 63
Query: 76 ILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK 135
IL+ YEKG F+LYTGR PS +H+GHL+PF+FT ++LQ+ FKV + I++TDDEK +
Sbjct: 64 ILNDYEKGNGFFLYTGRAPSL-GMHIGHLIPFIFT-KWLQEKFKVNVYIEITDDEKFLRN 121
Query: 136 -NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVG 194
+ ++++++ + EN DIIA GFD KTFIF D +Y+ Y VK+AK +T+N+V
Sbjct: 122 VDYTLDQTKEWSYENILDIIAVGFDPNKTFIFQDTEYIKN-MYPLSVKIAKKLTFNEVRA 180
Query: 195 IFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAP 254
FG +IG + +P +Q VP+ +F + RCLIP IDQDPY+R+ RD+A
Sbjct: 181 TFGLDTSSNIGIIFYPALQIVPT-------MFEKR---RCLIPAGIDQDPYWRLQRDIAE 230
Query: 255 RIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVE 314
+GY K A I S F P L G GKMS+S P +AIY+TD K ++ KI KYAFSGGQ +VE
Sbjct: 231 SLGYFKAAQIHSKFLPPLTGPEGKMSSSQPETAIYLTDDPKTVERKIMKYAFSGGQATVE 290
Query: 315 LHRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVER 373
LHRK G N ++D+ ++L F E DD + I+++Y +G MLTGE+KQ L L +E
Sbjct: 291 LHRKYGGNPDIDVAFQWLYMFFEPDDQRIRKIEEDYRSGAMLTGELKQILVDKLNAFLEE 350
Query: 374 HQVARAAVTDEMVDAF 389
H+ R D +V+ F
Sbjct: 351 HREKREKAKD-LVNVF 365
>sp|Q97ZX0|SYW_SULSO Tryptophan--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=trpS PE=3 SV=2
Length = 380
Score = 327 bits (838), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 169/360 (46%), Positives = 238/360 (66%), Gaps = 18/360 (5%)
Query: 14 EQVVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDL 73
E V+PWEV GK+DYDKLI +FG Q++ + L R++ L G HV LRR VFF+HRDL
Sbjct: 4 EFTVTPWEVK--GKVDYDKLIVQFGTQKITEELKQRIKNLAGDL-HVMLRRNVFFSHRDL 60
Query: 74 NDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCM 133
+ +L+ YEK + F+LYTGR PS +H+GHL+PF+FT ++LQ+ F L I++TDDEK M
Sbjct: 61 DLVLNDYEKSKGFFLYTGRAPSL-GMHIGHLIPFIFT-KWLQEKFNANLYIEITDDEKYM 118
Query: 134 WK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKV 192
++++++ A +N DIIA GF+ KTFIF D +Y+ Y VK+AK +T+++V
Sbjct: 119 RNPEFTLDQTRSWAYDNILDIIAVGFNPDKTFIFQDTEYIRN-MYPITVKIAKKLTFSEV 177
Query: 193 VGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDV 252
FG +IG + +P +Q P+ +F K RCLIP IDQDPY+R+ RD+
Sbjct: 178 RATFGLDASSNIGLIFYPALQIAPT-------MFEKK---RCLIPAGIDQDPYWRLQRDI 227
Query: 253 APRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQES 312
A +GY+K A I S F P L G GKMS+S+P +AIY+ D K ++ KI KYAFSGGQ +
Sbjct: 228 AESLGYYKAAQIHSKFLPPLTGPEGKMSSSNPETAIYLVDDPKTVERKIMKYAFSGGQPT 287
Query: 313 VELHRKLGANLEVDIPVKYLSFFL-EDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELV 371
+ELHRK G N E+D+P ++L +F EDD ++ I++EY +G MLTGE+KQ L L +
Sbjct: 288 IELHRKYGGNPEIDVPFQWLYYFFEEDDNRIKEIEEEYRSGKMLTGELKQILIDKLNNFL 347
>sp|Q976M1|SYW_SULTO Tryptophan--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=trpS PE=3 SV=2
Length = 381
Score = 326 bits (835), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/375 (44%), Positives = 247/375 (65%), Gaps = 18/375 (4%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
V+PWEV GK+DYDKLI +FG Q++ L ++++ + HV LRR VFF+HRDL+ +
Sbjct: 7 VTPWEVK--GKVDYDKLIVQFGTQKITSELKEKIKSIINDELHVMLRRDVFFSHRDLDLV 64
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK- 135
L Y+ G+ F+LYTGR PS +H+GHL+PF+FT ++LQD F V L I++TDDEK M
Sbjct: 65 LKDYQDGKGFFLYTGRAPSL-GMHIGHLIPFIFT-KWLQDKFNVNLYIEITDDEKFMRNP 122
Query: 136 NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGI 195
+++++++ A +N DIIA GF+ KTFIF D +Y+ Y +K+AK +T+++V
Sbjct: 123 EYTLDQTRQWAYDNILDIIAVGFNPDKTFIFQDTEYIRN-MYPIAIKIAKKLTFSEVRAT 181
Query: 196 FGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPR 255
FG +IG + +P +Q P+ +F + RCLIP IDQDPY+R+ RD+A
Sbjct: 182 FGLDTSSNIGIIWYPALQIAPT-------MFEKR---RCLIPAGIDQDPYWRLQRDIAES 231
Query: 256 IGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVEL 315
+GY+K A I S F P L G GKMS+S P +AIY+TD K ++ KI KYAFSGGQ ++EL
Sbjct: 232 LGYYKAAQIHSKFLPPLTGPEGKMSSSQPETAIYLTDDPKTVERKIMKYAFSGGQPTIEL 291
Query: 316 HRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVERH 374
HRK G N ++D+ ++L F E DD +++ I+++Y +G +LTGE+KQ L + L + +E H
Sbjct: 292 HRKYGGNPDIDVSFQWLYMFFEPDDNKIKKIEEDYRSGALLTGELKQILIEKLNDFLEEH 351
Query: 375 QVARAAVTDEMVDAF 389
+ R ++V+ F
Sbjct: 352 RQKREEAK-KLVNVF 365
>sp|Q8U453|SYW_PYRFU Tryptophan--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=trpS PE=3 SV=1
Length = 385
Score = 301 bits (771), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 165/380 (43%), Positives = 235/380 (61%), Gaps = 19/380 (5%)
Query: 12 EREQVVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHR 71
E E V+PWEV G IDY+KLI++FG L L++R RLT +F RR FF+HR
Sbjct: 2 EEEFKVTPWEVE--GIIDYNKLIEQFGTSPLTDDLLERTARLTKSELPIFFRRKFFFSHR 59
Query: 72 DLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEK 131
D + +LD YE+G+ F+LYTGRGPS +H+GH++PF F ++LQ+ F V L IQ+TDDEK
Sbjct: 60 DYDKVLDDYEQGKGFFLYTGRGPSG-PMHIGHIIPF-FATKWLQEKFDVNLYIQITDDEK 117
Query: 132 CMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYN 190
++K NL+ E+++ A +N DIIA GFD KTFIF + ++ Y+ + +AK + ++
Sbjct: 118 FLFKENLTFEDTKYWAYQNILDIIAVGFDPDKTFIFQNSEFT--KIYEMAIPIAKKINFS 175
Query: 191 KVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTR 250
+FGFT + IG + FP +QA P+F F K RCLIP AIDQDPY+R+ R
Sbjct: 176 MAKAVFGFTEQSKIGMIFFPAIQAAPTF-------FEKK---RCLIPAAIDQDPYWRLQR 225
Query: 251 DVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQ 310
D A +GY+K A + S FFP L G GKMSAS P +AIY+TD+ + KI K+A +GGQ
Sbjct: 226 DFAESLGYYKTAALHSKFFPPLTGLEGKMSASKPETAIYLTDNPEEAGKKIWKFALTGGQ 285
Query: 311 ESVELHRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEVKQRLAKVLTE 369
+++ R+ G N E + K+L F E DD +L G +L GE K+ L + + E
Sbjct: 286 PTLKEQREKGGNPEKCVVFKWLEIFFEPDDKKLMERYYACKNGELLCGECKRYLIQRVQE 345
Query: 370 LVERHQVARAAVTDEMVDAF 389
++ HQ R +++V+ F
Sbjct: 346 FLKEHQEKRKKA-EKLVEKF 364
>sp|Q9UY11|SYW_PYRAB Tryptophan--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=trpS PE=3 SV=1
Length = 385
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 225/371 (60%), Gaps = 18/371 (4%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
V+PWEV G +DY+KLI+ FG L + L+++ LT +F RR FF+HRD + +
Sbjct: 7 VTPWEVE--GVVDYNKLIEHFGTSPLTEELLEKTAELTKSELPLFFRRKFFFSHRDYDKV 64
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK- 135
L YE+G F+LYTGRGPS +H+GH++PF F ++LQ+ F V L IQ+TDDEK ++K
Sbjct: 65 LQDYEEGRGFFLYTGRGPSG-PMHIGHIIPF-FATKWLQEKFGVNLYIQITDDEKFLFKE 122
Query: 136 NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGI 195
NL+ E+++ A EN DIIA GFD KTFIF + ++ Y+ + +AK + ++ +
Sbjct: 123 NLTFEDTKHWAYENILDIIAVGFDPDKTFIFQNSEFT--KIYEMAIPIAKKINFSMAKAV 180
Query: 196 FGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPR 255
FGFT + IG + FP +Q P+F + RCLIP AIDQDPY+R+ RD A
Sbjct: 181 FGFTEQSKIGMIFFPAIQIAPTF----------FEKRRCLIPAAIDQDPYWRLQRDFAES 230
Query: 256 IGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVEL 315
+GY+K A I S F P+L +GKMSAS P +AIY+TDS + ++ K+ K+A +GG+ +++
Sbjct: 231 LGYYKTAAIHSKFVPSLTSLSGKMSASKPETAIYLTDSPEDVEKKVWKFALTGGRPTLKE 290
Query: 316 HRKLGANLEVDIPVKYLS-FFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVERH 374
R+ G E + K+L FF EDD +L+ G + GE K+ L + E ++ H
Sbjct: 291 QREKGGEPEKCVVFKWLEIFFEEDDKKLKERYYACKNGELTCGECKRYLISKIQEFLKEH 350
Query: 375 QVARAAVTDEM 385
Q R ++
Sbjct: 351 QKRRKKAEKQI 361
>sp|O59584|SYW_PYRHO Tryptophan--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=trpS PE=1 SV=2
Length = 386
Score = 285 bits (728), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 229/375 (61%), Gaps = 19/375 (5%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
V+PWEV G +DYDKLI FG L + L+++ LT +F RR FF+HRD + I
Sbjct: 7 VTPWEVE--GVVDYDKLIKHFGTSPLTEDLLEKTAELTKSELPIFFRRKFFFSHRDYDLI 64
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK- 135
L YE+G F+LYTGRGPS +H+GH++PF F ++LQ+ F V L IQ+TDDEK ++K
Sbjct: 65 LKDYEEGRGFFLYTGRGPSG-PMHIGHIIPF-FATKWLQEKFGVNLYIQITDDEKFLFKE 122
Query: 136 NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGI 195
NL+ ++++R A +N DIIA GFD KTFIF + ++ Y+ + +AK + ++ +
Sbjct: 123 NLTFDDTKRWAYDNILDIIAVGFDPDKTFIFQNSEFT--KIYEMAIPIAKKINFSMAKAV 180
Query: 196 FGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPR 255
FGFT + IG + FP +Q P+F F K RCLIP AIDQDPY+R+ RD A
Sbjct: 181 FGFTEQSKIGMIFFPAIQIAPTF-------FERK---RCLIPAAIDQDPYWRLQRDFAES 230
Query: 256 IGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVEL 315
+GY+K A + S F P+L +GKMSAS P +AIY+TDS + ++ K+ K+ +GG+ +++
Sbjct: 231 LGYYKTAALHSKFVPSLTSLSGKMSASKPETAIYLTDSPEDVEKKVWKFTLTGGRPTLKE 290
Query: 316 HRKLGANLEVDIPVKYLS-FFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVERH 374
R+ G E + K+L FF EDD +L+ G + GE K+ L + E ++ H
Sbjct: 291 QREKGGEPEKCVVFKWLEIFFEEDDKKLKERYYACKNGELTCGECKRYLISKIQEFLKEH 350
Query: 375 QVARAAVTDEMVDAF 389
Q R +++V+ F
Sbjct: 351 QRRRKKA-EKLVEKF 364
>sp|C6A032|SYW_THESM Tryptophan--tRNA ligase OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=trpS PE=3 SV=1
Length = 384
Score = 278 bits (710), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 154/373 (41%), Positives = 224/373 (60%), Gaps = 22/373 (5%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
V+PWEV+ G +DY+KLI++FG L L+ + + LT + ++ +R FF+HRD + +
Sbjct: 6 VTPWEVT--GVVDYNKLIEEFGTTPLTDDLLKKTEELTKKELPMYFKRKFFFSHRDYDLV 63
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK- 135
L YE G+ F+LYTGRGPS +H+GH++PF F ++LQ+ F V L +Q+TDDEK ++K
Sbjct: 64 LKDYEAGKGFFLYTGRGPSG-PMHIGHIIPF-FATKWLQENFGVNLYVQITDDEKFLFKP 121
Query: 136 NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGI 195
L+ E ++R A EN DIIA GFD KTFIF D ++ Y+ + +AK VTY+ +
Sbjct: 122 QLTFEGTKRWAYENILDIIAVGFDPDKTFIFQDSEFT--KIYEMAIPIAKKVTYSMAKAV 179
Query: 196 FGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPR 255
FGF + IG + FP +QA P+F F K R LIP AIDQDPY+R+ RD A
Sbjct: 180 FGFNEQSKIGMIFFPAIQAAPTF-------FEEK---RSLIPAAIDQDPYWRIQRDFAES 229
Query: 256 IGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVEL 315
+GY+K A + S F P L G GKMSAS P +AIY+TD + KI KYA +GG+ + +
Sbjct: 230 LGYYKTAALHSKFVPGLMGLGGKMSASKPETAIYLTDDPEEAGKKIWKYALTGGRATAKE 289
Query: 316 HRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGA---GGMLTGEVKQRLAKVLTELVE 372
R+LG + + K+L F E D + + + Y A G +L G+ K+ L + + ++
Sbjct: 290 QRELGGEPDKCVVFKWLEIFFEPDE--KKLLERYIACKNGEILCGQCKRYLIEKVQNFLK 347
Query: 373 RHQVARAAVTDEM 385
HQ R E+
Sbjct: 348 EHQEKREKAKKEI 360
>sp|B6YUH1|SYW_THEON Tryptophan--tRNA ligase OS=Thermococcus onnurineus (strain NA1)
GN=trpS PE=3 SV=1
Length = 384
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 223/364 (61%), Gaps = 18/364 (4%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
V+PW+V G +DY+KLI++FG L L+++ +LT ++ RR FF+HRD + +
Sbjct: 6 VTPWDVE--GLVDYNKLIEEFGTSPLTDELLEKTAQLTKSELPLYFRRRFFFSHRDYDKV 63
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKN 136
L YE G+ F+LYTGRGPS +H+GH++PF F ++LQ+ F V L IQ+TDDEK ++K+
Sbjct: 64 LQDYESGKGFFLYTGRGPSG-PMHIGHIIPF-FATKWLQEKFGVNLYIQITDDEKFLFKD 121
Query: 137 -LSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGI 195
L+ E+++ A +N DIIA GFD +TFIF D ++ Y+ + +AK + ++ +
Sbjct: 122 KLTFEDTKYWAYQNILDIIAVGFDPDRTFIFQDSEFT--KIYEMAIPIAKKINFSMAKAV 179
Query: 196 FGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPR 255
FGFT + IG + +P +QA P+F F K RCLIP AIDQDPY+R+ RD A
Sbjct: 180 FGFTEQSKIGMIFYPAIQAAPTF-------FEKK---RCLIPAAIDQDPYWRLQRDFAES 229
Query: 256 IGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVEL 315
+GY+K A I S F P L G GKMSAS P +AIY+TD + + KI KYA +GG+ + +
Sbjct: 230 LGYYKTAAIHSKFVPGLMGLEGKMSASKPETAIYLTDDPEEVGRKIWKYALTGGRATAKE 289
Query: 316 HRKLGANLEVDIPVKYLS-FFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVERH 374
R+ G E + K+L FF EDD +L G +L G+ K+ L K + E ++ H
Sbjct: 290 QREKGGEPEKCVVFKWLEIFFEEDDKKLMERYHACKNGELLCGQCKRYLIKKVQEFLKEH 349
Query: 375 QVAR 378
Q R
Sbjct: 350 QKKR 353
>sp|A3MX72|SYW_PYRCJ Tryptophan--tRNA ligase OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=trpS PE=3 SV=1
Length = 374
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 226/379 (59%), Gaps = 14/379 (3%)
Query: 12 EREQVVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHR 71
+ E VV+PWEV G++DY KL+ +FG + L Q+ V +++ G H +RRG F+AHR
Sbjct: 2 DEEFVVTPWEVR--GRVDYQKLMQQFGARPLTQAEVSLLEKYAGEV-HPLIRRGFFYAHR 58
Query: 72 DLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEK 131
DL+ IL + +G+ + LYTGRGPS +H+GH+VP++ ++L D F V + Q+TDDEK
Sbjct: 59 DLDAILKWHGEGKPWALYTGRGPSG-PVHIGHMVPWILL-KWLSDKFGVEVYFQMTDDEK 116
Query: 132 CMW-KNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYN 190
+ +EE+ + A ENA D+IA GF K + D + Y KVAK +T+N
Sbjct: 117 FYDDPEMRLEEATKWAYENALDVIALGFTPDKLHLIIDTKDIK-PLYPIAAKVAKKLTWN 175
Query: 191 KVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTR 250
V FGFT +IG + +P +Q +F P G+ LIPCAIDQDPYFR+ R
Sbjct: 176 TVKATFGFTDSTNIGLIFYPSLQIAVAF---LPTELHGRP-TPVLIPCAIDQDPYFRLAR 231
Query: 251 DVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQ 310
D+A +GY KPA + S F AL GE+ KMSAS+PNSAIY D K I+ KI A++GG+
Sbjct: 232 DIAESLGYPKPATLYSKFIMALTGES-KMSASNPNSAIYTIDDEKTIRRKIAN-AYTGGR 289
Query: 311 ESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTEL 370
+ E R+LG N +V Y F DDA +E I +G +L GE KQ L + + +
Sbjct: 290 PTAEEQRRLGGNPDVCPVYHYHMLFDPDDASVEKIYHSCKSGALLCGECKQMLYEKIRKF 349
Query: 371 VERHQVARAAVTDEMVDAF 389
V++HQ AR D+ VDA+
Sbjct: 350 VKQHQEAREKARDK-VDAY 367
>sp|Q5JEP3|SYW_PYRKO Tryptophan--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=trpS PE=3 SV=1
Length = 384
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 219/364 (60%), Gaps = 18/364 (4%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
V+PW+V G +DY+KLI++FG L L+++ LT +F RR FF+HRD + +
Sbjct: 6 VTPWDVE--GVVDYNKLIEQFGTSPLTDELIEKTAELTKSELPLFFRRRFFFSHRDYDKV 63
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK- 135
L YE G F+LYTGRGPS +H+GH++PF F ++LQ+ F V L IQ+TDDEK ++K
Sbjct: 64 LADYESGRGFFLYTGRGPSG-PMHIGHIIPF-FATKWLQENFDVNLYIQITDDEKFLFKE 121
Query: 136 NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGI 195
LS E+++R A EN DIIA GFD KTFIF + ++ Y+ + +AK + ++ +
Sbjct: 122 KLSFEDTKRWAYENILDIIAVGFDPDKTFIFQNSEFT--KIYEMALPIAKKINFSMARAV 179
Query: 196 FGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPR 255
FGF + IG + +P +QA P+F F K RCLIP AIDQDPY+R+ RD A
Sbjct: 180 FGFNEQSKIGMIFYPAIQAAPTF-------FEKK---RCLIPAAIDQDPYWRLQRDFAES 229
Query: 256 IGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVEL 315
+GY+K A I S F P L GKMSAS P +A+Y+TD + KI K+A +GGQ +++
Sbjct: 230 LGYYKTAAIHSKFVPGLTSLEGKMSASKPETAVYLTDDPEEAGKKIWKFALTGGQPTLKE 289
Query: 316 HRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVERH 374
R+ G N E + K+ F E DD +L + AG + G+ K+ L + + + ++ H
Sbjct: 290 QREKGGNPEKCVVFKWFEIFFEPDDEKLMERYRACKAGELTCGQCKRELIERVQKFLKEH 349
Query: 375 QVAR 378
Q R
Sbjct: 350 QKKR 353
>sp|Q8ZTU5|SYW_PYRAE Tryptophan--tRNA ligase OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=trpS
PE=3 SV=1
Length = 375
Score = 251 bits (642), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 219/376 (58%), Gaps = 19/376 (5%)
Query: 12 EREQVVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHR 71
E E VV+PWEV G++DY+KL+ FG + L + V +++ G H +RRG F+AHR
Sbjct: 2 EEEFVVTPWEVR--GRVDYEKLLKHFGAKPLTKDEVALLEKYAGEV-HPLIRRGFFYAHR 58
Query: 72 DLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEK 131
D + I+ + +G + LYTGRGPS +H+GH+VP++ ++ D F + + Q+TDDEK
Sbjct: 59 DFDFIMKWHGEGRPWALYTGRGPSG-PVHIGHMVPWILL-KWFSDKFGLEVYFQITDDEK 116
Query: 132 CMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYN 190
+ +EE+ A ENA D+IA GF + + D + Y V+VAK +T+N
Sbjct: 117 FYDDPEMKLEEATNWAYENALDVIALGFSPERLHLIIDTKDIK-PLYPIAVRVAKKLTWN 175
Query: 191 KVVGIFGFTGEDHIGKVSFPPVQ-AVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMT 249
V FGFT +IG + +P +Q AV P+ ++ LIPCAIDQDPYFR+
Sbjct: 176 TVKATFGFTDSTNIGLIFYPSLQIAVAFLPTEL-----RREATPVLIPCAIDQDPYFRLA 230
Query: 250 RDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGG 309
RD+A +GY KP+ + S F AL GE+ KMSAS+P+SAIY D K ++ K+ AF+GG
Sbjct: 231 RDIADALGYPKPSTLYSKFIMALTGES-KMSASNPDSAIYTLDDEKTVRRKVMN-AFTGG 288
Query: 310 QESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVK----QRLAK 365
+ + E RK G N EV Y F DDA +E I+++ +G +L GE K +++ K
Sbjct: 289 RPTAEEQRKYGGNPEVCPVFHYHMLFDPDDASVEKIRQDCKSGALLCGECKLKLHEKITK 348
Query: 366 VLTELVERHQVARAAV 381
L E ER + AR V
Sbjct: 349 FLKEHRERREKARGKV 364
>sp|A4WL99|SYW_PYRAR Tryptophan--tRNA ligase OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=trpS PE=3 SV=1
Length = 374
Score = 249 bits (637), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 217/372 (58%), Gaps = 19/372 (5%)
Query: 16 VVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLND 75
VV+PWEV GK+DY+KL+ +FG + L V +++ G H ++RG F+AHRD +
Sbjct: 6 VVTPWEVR--GKVDYEKLLRQFGAKPLTAEEVALLEKYAGDV-HPLIKRGFFYAHRDFDF 62
Query: 76 ILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK 135
IL + +G + LYTGRGPS +H+GH+VP++ ++ D F V + Q+TDDEK
Sbjct: 63 ILKWHGEGRPWALYTGRGPSG-PVHIGHMVPWILL-KWFSDKFGVEVYFQMTDDEKFFDD 120
Query: 136 -NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVG 194
+ +EE+ A ENA D+IA GF K + D + Y V+VAK +T+N V
Sbjct: 121 PEMKLEEATGWAYENALDVIALGFGPDKLHLIVDTKDIA-PLYPIAVRVAKKLTWNTVKA 179
Query: 195 IFGFTGEDHIGKVSFPPVQ-AVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVA 253
FGFT +IG + +P +Q AV P+ K+ LIPCAIDQDPYFR+ RD+A
Sbjct: 180 TFGFTDSSNIGLIFYPSLQIAVAFLPTEL-----KKEPTPVLIPCAIDQDPYFRLARDIA 234
Query: 254 PRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESV 313
+ Y KP + S F AL GE+ KMSAS+P+SAIY D K +K+KI AF+GG+ +
Sbjct: 235 DSLSYPKPTTLYSKFIMALTGES-KMSASNPDSAIYTMDDDKTVKHKILN-AFTGGRPTA 292
Query: 314 ELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVK----QRLAKVLTE 369
E RK G N ++ Y F DDA +E I+++ +G +L GE K ++++K L E
Sbjct: 293 EEQRKYGGNPDICPVFHYHMLFDPDDASVEKIRQDCKSGALLCGECKLKLHEKISKFLKE 352
Query: 370 LVERHQVARAAV 381
ER + AR V
Sbjct: 353 HRERREKARGKV 364
>sp|Q9HN66|SYW2_HALSA Tryptophan--tRNA ligase 2 OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=trpS2 PE=3 SV=1
Length = 380
Score = 208 bits (529), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 206/378 (54%), Gaps = 28/378 (7%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
V+P+ V S +DY+KL+ +FG L D+ R P H + RG+F+A RD++D
Sbjct: 8 VTPYAVESD-DLDYEKLLARFGADELTD---DQRARF---PDHPLVNRGLFYAGRDVDDF 60
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKN 136
L A E+ + TG GPS +HLGH + F F R LQD F + + L+DDEK +K+
Sbjct: 61 LTAGEQS----IVTGVGPSG-PMHLGHAMVFYFARR-LQDEFGARVYVPLSDDEKYWFKD 114
Query: 137 LSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIF 196
+ E+ R N +D++A GFD T I D Y A V + + ++
Sbjct: 115 QTPAETGDYLRANLRDLLAVGFDPELTRIVVD-TRDADVLYPLATAFAGDVRHATLQNVY 173
Query: 197 GFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRI 256
G D++G+ +P VQ P L G+ L+P A+DQDP+ R++RDVA +
Sbjct: 174 G--EPDNVGQAFYPAVQTAHLL---LPQLVHGEHE--TLVPIAVDQDPHVRVSRDVAAKA 226
Query: 257 GY--HKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVE 314
Y KP + F P+L G GKMS+S +I +TDS ++ K+ +A++GG+ SVE
Sbjct: 227 RYPVGKPGALLMQFLPSLAG-PGKMSSS-AGVSIRLTDSPDTVREKVRTHAYTGGRASVE 284
Query: 315 LHRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVER 373
HR G D+P +YLS F E DDAEL I++EY AG +L+GE+K A +TE +
Sbjct: 285 EHRAKGGVPAEDVPFQYLSAFFEPDDAELARIEREYRAGDLLSGELKDLAADRITEFLAA 344
Query: 374 HQVARAAVTD--EMVDAF 389
HQ RAA+ D E +DAF
Sbjct: 345 HQRRRAALGDVTEALDAF 362
>sp|Q8TYF7|SYW_METKA Tryptophan--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=trpS PE=3 SV=1
Length = 374
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 188/379 (49%), Gaps = 23/379 (6%)
Query: 16 VVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLND 75
++ PW+V ++DY++L ++FG + +D+ + + + R R P L RG+ F HRD +
Sbjct: 1 MIDPWDVE---EVDYERLTEEFGIRPIDEKVRELLPR---RFP--LLDRGIVFGHRDYDS 52
Query: 76 ILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK 135
L Y G+ + +G PS +HLGH + + Q V + + + D E +
Sbjct: 53 FLKDYNDGKLVSVLSGMMPSGR-MHLGHKT-VVDQLVFYQQEMDVKVYVPIADLEAHHAR 110
Query: 136 NLSVEESQRLA-RENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVG 194
N+ ++ + R+A E + A G D+ + + +A +T+N V
Sbjct: 111 NMDLDRAHRIAVEEYVLNYAALGLDLDPDRCEIYLQSERKTVQRMALLLAGRLTWNTVKN 170
Query: 195 IFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAP 254
+GFTGE ++G P VQA P G R L+P +DQDP+ R+TRD+A
Sbjct: 171 TYGFTGETNMGHAFAPIVQAADIL---HPQEIEGPH--RVLVPVGVDQDPHLRLTRDIAE 225
Query: 255 RIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVE 314
+ KPA F L G GKMS+S PN+AI++TD + K K+ A +GG ++E
Sbjct: 226 KEDLIKPASTYHRFMTGLTG--GKMSSSKPNTAIFLTDDPETAKEKVWN-AKTGGGATLE 282
Query: 315 LHRKLGANLEVDIPVKYLSFFLED----DAELEHIKKEYGAGGMLTGEVKQRLAKVLTEL 370
HR+ G N + + + + + L D D +L I+K+ G ++ GE K+ + + L E+
Sbjct: 283 EHREHGGNPDECVVYELMVYHLADRIGGDEKLREIRKKCREGDIICGECKRMVGEALAEI 342
Query: 371 VERHQVARAAVTDEMVDAF 389
+E + R V DE+ D
Sbjct: 343 LEELERRREDVRDELPDLL 361
>sp|O26352|SYW_METTH Tryptophan--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=trpS PE=3 SV=1
Length = 364
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 175/379 (46%), Gaps = 44/379 (11%)
Query: 16 VVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLND 75
++ PW S K++Y LI+ FG + + L D V P +RRG+ F HRD
Sbjct: 1 MIDPW---GSAKLEYQDLIENFGVRPFSEVL-DEVPE-----PSWLMRRGIIFGHRDYER 51
Query: 76 ILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK 135
I+ A +KGE F + TG PS +H+GH + D + I + D E +
Sbjct: 52 IISAMKKGEDFAVVTGMMPSGR-MHIGH--KMIVDQLRWYDRMGAEIFIPIADMEAYSAR 108
Query: 136 NLSVEESQRLA-RENAKDIIACGFDVTK----------TFIFSDFDYVGGAFYKNMVKVA 184
+ E+S+R+A E IA G D+ K + D YV +A
Sbjct: 109 GVDFEDSRRIAIEEYIAGYIALGLDLEKDNIHVYLQSENLMVEDLAYV----------LA 158
Query: 185 KCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDP 244
V +N++ I+GFTG + + P +Q L + ++P DQDP
Sbjct: 159 GKVNFNELRAIYGFTGSTSMAHMYAPIIQVSDILHPQLDELGGPRP---VIVPVGPDQDP 215
Query: 245 YFRMTRDVAPRI----GYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNK 300
+ R+TRD+A R G+ P+ F L G GKMS++ P SAI+++D+ + + K
Sbjct: 216 HIRLTRDIAARFRDRYGFILPSSTYHRFMGGLTG--GKMSSNRPKSAIFLSDTPEEAEAK 273
Query: 301 INKYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEV 359
I + A +GG+E+++ R+LG E I + L + + D+ LE I + G ++ GE
Sbjct: 274 I-RNAKTGGRETLKEQRELGGVPEECIIYETLLYHMSGSDSRLEEIYESCRNGTLMCGEC 332
Query: 360 KQRLAKVLTELVERHQVAR 378
K A+ + + E V R
Sbjct: 333 KNNTAEFIRKFFEELSVKR 351
>sp|Q58810|SYW_METJA Tryptophan--tRNA ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=trpS PE=3 SV=1
Length = 370
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 189/375 (50%), Gaps = 34/375 (9%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
++PWE + IDY K +++FG + +VD + L + H F RR + HRD I
Sbjct: 6 LTPWETPAV--IDYKKTMEQFGVK----PIVDVLGDL--KEEHHFFRRNIILGHRDFERI 57
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGH--LVPFMFTNRYLQDAFKVPLVIQLTDDEKCMW 134
+DA + ++F + +G PS + +H GH +V + + D +P+ D + W
Sbjct: 58 VDAIKNNKEFAVVSGMMPSGK-MHFGHKMVVDLLKFYQKYTDNINIPIA-----DLEAYW 111
Query: 135 -KNLSVEESQRLA-RENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKV-AKCVTYNK 191
+N+S E ++ LA E + IA G D K ++ Y K++ + +K +++
Sbjct: 112 ARNMSFETTKELALNEYITNYIALGLDPEKINVYLQSKYQK---VKDLALILSKRTNWSE 168
Query: 192 VVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRD 251
+ I+GF GE +IG V P VQ S + ++P IDQDP+ R+TRD
Sbjct: 169 MKAIYGFKGETNIGHVFAPIVQVADILHPQLDENLS-PEPKPVVVPVGIDQDPHIRLTRD 227
Query: 252 VAPRIGYHK---PALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSG 308
+A R K P+ F L G GKMS+S P +AI++TD K +K KI A +G
Sbjct: 228 IANRAKEFKFIPPSSTYHRFMTGLLG--GKMSSSKPETAIFLTDDEKTVKKKIFS-AKTG 284
Query: 309 GQESVELHRKLGANLEVDIPVK-YLSFFLEDDAELEHIKKEYGAGGMLTGEVK----QRL 363
G+E++E H+K G E + + +L + DD EL I ++ +G + G+ K +R+
Sbjct: 285 GRETLEEHKKYGGVPEECVVYELFLYHLILDDKELAEIYQKCRSGELTCGKCKKMAYERV 344
Query: 364 AKVLTELVERHQVAR 378
+ L +L E+ + A+
Sbjct: 345 VEFLKDLKEKREQAK 359
>sp|A2BLD4|SYW_HYPBU Tryptophan--tRNA ligase OS=Hyperthermus butylicus (strain DSM 5456
/ JCM 9403) GN=trpS PE=3 SV=1
Length = 373
Score = 134 bits (338), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 180/366 (49%), Gaps = 24/366 (6%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
+ PW +S+ +++Y+KL FG + Q L+ V++ G+P H +RRG+ F HRD I
Sbjct: 6 LDPW--ASAIRLEYEKLFRYFGIKPF-QPLLPEVEKAFGKP-HRLMRRGIIFGHRDYEKI 61
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKN 136
L+AY GE+ L TG PS + H GH + Y + F++ +VI D E +
Sbjct: 62 LEAYRSGERIALVTGFMPSGK-FHFGHKMVADQIIYYQKLGFEIFVVI--ADAEAYAVRR 118
Query: 137 LSVEESQRLA-RENAKDIIACGFDVTK-TFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVG 194
L + + E ++IA G + K T I+ +Y +Y+ + ++ VT ++
Sbjct: 119 LDRRKIIEIGLYEYVANLIALGLEKNKHTHIYFQTNY-ETPYYRLIQMFSRRVTLEEMSA 177
Query: 195 IFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAP 254
I+ G+ K+ QA + F G ++ ++P DQDP+ R+TRD+A
Sbjct: 178 IY---GDLEPSKIMAALTQAADILHPQLDY-FGGFKYV--VVPVGADQDPHIRLTRDIAA 231
Query: 255 R----IGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQ 310
R +G +PA F L G KMS+S P I++TD K+ + A +GG+
Sbjct: 232 RFENELGLRRPASTYHRFQTGLDG--NKMSSSRPEYTIFLTDPVDIAVRKLKR-ALTGGR 288
Query: 311 ESVELHRKLGANLE-VDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTE 369
+VE R+LG E + YL +EDD +L I ++ +L G K+ A++L +
Sbjct: 289 ATVEEQRRLGGEPEKCTVYEFYLYHLIEDDTQLRKIYEDCRGSRLLCGPDKEYAAELLAK 348
Query: 370 LVERHQ 375
+E HQ
Sbjct: 349 FLEEHQ 354
>sp|Q9Y924|SYW_AERPE Tryptophan--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=trpS PE=1
SV=2
Length = 372
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 172/360 (47%), Gaps = 35/360 (9%)
Query: 29 DYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYL 88
DYD+L+ FG + + L + R G P +RRG+ F HRD + IL+A +GE+ +
Sbjct: 16 DYDRLLRTFGIRPFSEVLP--LLRKAGMEPSFLMRRGIIFGHRDFDKILEAKARGERVAV 73
Query: 89 YTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLA-R 147
TG PS + H GH + ++ FKV + + D E + + EE+ R+A
Sbjct: 74 LTGFMPSGK-FHFGHKLTVDQLIYLQKNGFKV--FVAIADAEAFAVRRIGREEAVRIAVE 130
Query: 148 ENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKV 207
E ++IA G D T + + G +++ + + VT ++ I+G
Sbjct: 131 EYIANMIALGLDPKDTEFYFQTNR-GTPYFRLIQLFSGKVTAAEMEAIYG---------- 179
Query: 208 SFPPVQAVPSFPSSFPHL------FSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIG---- 257
P + + S + L + G H+ ++P DQDP+ R+TRD+A R+
Sbjct: 180 ELTPAKMMASLTQAADILHVQLDEYGGYRHV--VVPVGADQDPHLRLTRDLADRMAGVVE 237
Query: 258 YHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVELHR 317
+PA P L G KMS+S P+S I++TD + +NK+ + A +GG+ + E R
Sbjct: 238 LERPASTYHKLQPGLDGR--KMSSSRPDSTIFLTDPPEVARNKLFR-ALTGGRATAEEQR 294
Query: 318 KLGANLEVDIPVKYLSFF--LEDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVERHQ 375
+LG EV V ++ + + DD E++HI G +L GE KQ + L + HQ
Sbjct: 295 RLGGVPEV-CSVYHMDLYHLMPDDGEVKHIYTSCRLGKILCGECKQIAWEKLERFLAEHQ 353
>sp|O28579|SYW_ARCFU Tryptophan--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=trpS PE=3 SV=1
Length = 420
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 116/429 (27%), Positives = 178/429 (41%), Gaps = 84/429 (19%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSL--VDRVQRLTGRPPHVFLRRGVFFAHRDLN 74
V+PWEV G IDY KLI++FG Q + L +D PH+ +RRG F HRD
Sbjct: 3 VTPWEVE--GVIDYSKLIEEFGMQPFSEVLPEIDN--------PHILMRRGAIFGHRDYW 52
Query: 75 DILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMW 134
I++A +K E + + +G PS H GH + M + Q A V + D E
Sbjct: 53 RIIEAMQKKEPWAVMSGFMPSGLP-HFGHKMT-MDEIVWHQSAGGKAFV-AIADMEAHSV 109
Query: 135 KNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMV-KVAKCVTYNKVV 193
+ LS E+++ L K IIA G F + K++ +++ V ++++
Sbjct: 110 RGLSWEKTRELGMLYIKSIIALGLREDAVIYFQS----KSSHVKDLAFELSAEVNFSELR 165
Query: 194 GIFGFTGEDHIGKVSFPPVQA------------------VPSFPSSFPHL---------- 225
I+GF + + K+ +QA VP PH+
Sbjct: 166 AIYGFNSDTSLAKMFVTAIQAADILHPQLSDFGGPKPVVVPVGADQDPHMRLTRDLAARI 225
Query: 226 --FS--------------GKDHLRCLIPCAIDQDPYF-------------RMTRDVAPRI 256
FS G ++L L D+ Y R R + I
Sbjct: 226 SIFSFEPVEGGVRVRSRKGAEYLSSLRDLEFDKKIYEEHMDIFGEAEEIERAVRKIEVEI 285
Query: 257 G---YHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESV 313
G + P+ F L G GKMS+S P S I + D + K+ K AF+GG+ +
Sbjct: 286 GGFAFIPPSSTYHRFTTGLTG--GKMSSSKPESYISLLDPPEEGAKKVMK-AFTGGRATA 342
Query: 314 ELHRKLGANLEVDIPVKYLSFFLED-DAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVE 372
E R+LG + + + SF L D D EL I+ E G +L G+ K+ A+++ ++
Sbjct: 343 EEQRRLGGEPDRCVVFELYSFHLIDSDEELNQIEAECREGRLLCGKCKKMAAELVKSFLK 402
Query: 373 RHQVARAAV 381
HQ AV
Sbjct: 403 EHQEKMEAV 411
>sp|Q8PWV5|SYW_METMA Tryptophan--tRNA ligase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=trpS PE=3 SV=2
Length = 491
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 22/243 (9%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
+ PW SSS DY KL ++FG + L + PH ++RR + F HRD I
Sbjct: 5 LDPW--SSSNITDYSKLFEEFGISPFENILPEIPS------PHKYMRRRIIFGHRDYEQI 56
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFK-VPLVIQLTDDEKCMWK 135
+A G F + G PS + +HLGH M ++ + K + + D E +
Sbjct: 57 AEAMRTGAPFSVMDGFMPSGK-VHLGHK---MVMDQIVWHQEKGASAFVGIADREAFSVR 112
Query: 136 NLSVEESQRLA-RENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMV-KVAKCVTYNKVV 193
S ++ + + E +IA GF F G K++ ++ V ++++
Sbjct: 113 GFSWQKCREIGVEEYILSLIALGFKPEGLIYFQS----GCGSVKDLAFELGAKVNFSELS 168
Query: 194 GIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVA 253
I+GF+GE + + QA K ++P DQDP+ R+TR +A
Sbjct: 169 AIYGFSGETSLSHMLSVATQAADILQPQLEEFGGSKP---VVVPVGPDQDPHLRLTRGLA 225
Query: 254 PRI 256
++
Sbjct: 226 GKM 228
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 261 PALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVELHRKLG 320
PA F LQG GKMS+S P+S I +TD K K+ K A +GG ++E +KLG
Sbjct: 360 PASTYHRFMSGLQG--GKMSSSIPDSHIALTDDPKEGAKKV-KRAKTGGCITLEEQKKLG 416
Query: 321 ANL-EVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVERHQVARA 379
E + L +EDD EL I++E G + G KQ A+ + E ++ HQ R
Sbjct: 417 GKPDECSVFELMLFHLIEDDEELLEIREECIYGTRMCGSCKQLAAEKMQEFLKDHQEKRE 476
Query: 380 AVTDEM 385
+++
Sbjct: 477 LAREQL 482
>sp|Q8TUA1|SYW_METAC Tryptophan--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=trpS PE=3 SV=1
Length = 437
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 20/242 (8%)
Query: 17 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDI 76
+ PW SSS DY KL ++FG + L + PH+++RR V F HRD I
Sbjct: 5 LDPW--SSSDITDYSKLFEEFGISPFENVLPEIPS------PHMYMRRKVIFGHRDYEQI 56
Query: 77 LDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKN 136
+A G F + G PS + +HLGH + + + D E +
Sbjct: 57 AEAMRTGAPFSVMDGFMPSGK-VHLGH--KMVMDQIVWHQEMGASAFVGIADREAFSVRG 113
Query: 137 LSVEESQRLA-RENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMV-KVAKCVTYNKVVG 194
S ++ + + E +IA GF F G K++ ++ V ++++
Sbjct: 114 FSWQKCREIGVEEYILSLIALGFKPDGLIYFQS----GCGSVKDLAFELGAKVNFSELSA 169
Query: 195 IFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAP 254
I+GF+GE + + QA P L ++P DQDP+ R+TR +A
Sbjct: 170 IYGFSGETSLSHMLSVATQAADILQ---PQLEEFGGPKPVVVPVGPDQDPHLRLTRGLAG 226
Query: 255 RI 256
++
Sbjct: 227 KM 228
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 247 RMTRDVAPRIG---YHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINK 303
++ R+V G + PA F LQG GKMS+S P S I +TDS K K+ K
Sbjct: 289 KLVREVTVEFGGYAFIPPASTYHRFMSGLQG--GKMSSSIPESQIALTDSPKEGAKKV-K 345
Query: 304 YAFSGGQESVELHRKLGANLEVDIPVKYLSFFL-EDDAELEHIKKEYGAGGMLTGEVKQR 362
A +GG ++E +KLG E + + F L D EL IK+E +G + G KQ
Sbjct: 346 RAKTGGCVTLEEQKKLGGKPEECSVFELMLFHLIASDEELLEIKQECISGTRMCGSCKQL 405
Query: 363 LAKVLTELVERHQVAR 378
A+ + E ++ HQ R
Sbjct: 406 AAEKMQEFLKDHQEKR 421
>sp|Q9HN83|SYW1_HALSA Tryptophan--tRNA ligase 1 OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=trpS1 PE=3 SV=1
Length = 513
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 100/249 (40%), Gaps = 27/249 (10%)
Query: 16 VVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRP-PHVFLRRGVFFAHRDLN 74
+ PW S+ DY L D+FG + + L G P PH +RR + F HRD
Sbjct: 16 ALDPW--GSATISDYRALFDEFGIEAFEDVL-------DGVPTPHSLMRRAIIFGHRDYR 66
Query: 75 DILDAYEKGEKFYLYTGRGPSSEALHLGHLVPF---MFTNRYLQDAFKVPLVIQLTDDEK 131
+ A E F +G P+ + H+GH + F ++ + DA+ + + D E
Sbjct: 67 RVAAAMRNDEPFAALSGFMPTGDP-HIGHKMVFDELIWHQQQGGDAYAL-----IADLEA 120
Query: 132 CMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNK 191
+ L E A + ++A GFD + ++ ++ ++
Sbjct: 121 HSARGLDWAEIDEHAEDYLLSLLALGFDADEGELYR--QSTNRELQDLAFELGIEANTSE 178
Query: 192 VVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRD 251
I+GF G+ + + Q +P L + K +IP DQDP+ R RD
Sbjct: 179 FEAIYGFGGDTDVSHMQSVVTQMADIL---YPQLDAPK---PTVIPVGPDQDPHVRFARD 232
Query: 252 VAPRIGYHK 260
+A R Y K
Sbjct: 233 LAERTRYFK 241
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 257 GYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVELH 316
G+ P+ + F L G GKMS+S+P S I + D + +K+ A +GG+++
Sbjct: 374 GFVPPSSVYHRFMTGLTG--GKMSSSEPASHISLLDDPETGADKVAA-ATTGGRDTAAEQ 430
Query: 317 RKLGANLEVDIPVKYLSFFL---EDDAELEHIKKEYGAGGMLTGEVKQRLAKVLTELVER 373
R+ G + D PV L +L +DDA E + E G L G K++ A ++ + +E
Sbjct: 431 RERGGEPD-DCPVYELYAYLLAGDDDALAEEVYAECANGDRLCGGCKEQAADLMAQFLET 489
Query: 374 HQVARAAVTDEMVD 387
HQ R A D + +
Sbjct: 490 HQENREAARDVLAE 503
>sp|Q99XH4|SYW_STRP1 Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M1
GN=trpS PE=3 SV=1
Length = 340
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 128/309 (41%), Gaps = 47/309 (15%)
Query: 88 LYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
+ TG P+ + LHLGH V + +LQ+ K + + L D + E Q
Sbjct: 6 ILTGDRPTGK-LHLGHYVGSLKNRVFLQNENKYKMFVFLADQQALTDHAKESELIQESIG 64
Query: 148 ENAKDIIACGFDVTKTFIF--SDFDYVG--GAFYKNMVKVAKCV---TYNKVVGIFGFTG 200
A D ++ G D ++ IF S + +Y N+V +A+ T + GF
Sbjct: 65 NVALDYLSVGLDPKQSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQKGFGE 124
Query: 201 EDHIGKVSFPPVQA--VPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIG- 257
G + +P QA + +F ++ L+P DQ P TR++
Sbjct: 125 SIPSGFLVYPVSQAADITAFKAN-------------LVPVGNDQKPMIEQTREIVRSFNH 171
Query: 258 -YHKPALIE----------SSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
YH L+E + P L G KMS S N IY++D A ++ K+
Sbjct: 172 TYHTDCLVEPEGIYPENEKAGRLPGLDG-NAKMSKSLGN-GIYLSDDADTVRKKVMSMYT 229
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFL--EDDAELEHIKKEYGAGGMLTGEVKQRLA 364
+E ++ N+ YL F ED A++E +K+ Y GG+ G+VK +
Sbjct: 230 DPNHIKIEDPGQIEGNM----VFHYLDIFARKEDQADIEAMKEHYQIGGL--GDVKTK-- 281
Query: 365 KVLTELVER 373
+ L +++ER
Sbjct: 282 RYLLDILER 290
>sp|P0DG61|SYW_STRPQ Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=trpS PE=3 SV=1
Length = 340
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 128/309 (41%), Gaps = 47/309 (15%)
Query: 88 LYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
+ TG P+ + LHLGH V + +LQ+ K + + L D + E Q
Sbjct: 6 ILTGDRPTGK-LHLGHYVGSLKNRVFLQNENKYKMFVFLADQQALTDHAKESELIQESIG 64
Query: 148 ENAKDIIACGFDVTKTFIF--SDFDYVG--GAFYKNMVKVAKCV---TYNKVVGIFGFTG 200
A D ++ G D ++ IF S + +Y N+V +A+ T + GF
Sbjct: 65 NVALDYLSVGLDPKQSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQKGFGE 124
Query: 201 EDHIGKVSFPPVQA--VPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIG- 257
G + +P QA + +F ++ L+P DQ P TR++
Sbjct: 125 SIPSGFLVYPVSQAADITAFKAN-------------LVPVGNDQKPMIEQTREIVRSFNH 171
Query: 258 -YHKPALIE----------SSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
YH L+E + P L G KMS S N IY++D A ++ K+
Sbjct: 172 TYHTDCLVEPEGIYPENEKAGRLPGLDG-NAKMSKSLGN-GIYLSDDADTVRKKVMSMYT 229
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFL--EDDAELEHIKKEYGAGGMLTGEVKQRLA 364
+E ++ N+ YL F ED A++E +K+ Y GG+ G+VK +
Sbjct: 230 DPNHIKIEDPGQIEGNM----VFHYLDIFARKEDQADIEAMKEHYQRGGL--GDVKTK-- 281
Query: 365 KVLTELVER 373
+ L +++ER
Sbjct: 282 RYLLDILER 290
>sp|P67598|SYW_STRP8 Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=trpS PE=3 SV=1
Length = 340
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 128/309 (41%), Gaps = 47/309 (15%)
Query: 88 LYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
+ TG P+ + LHLGH V + +LQ+ K + + L D + E Q
Sbjct: 6 ILTGDRPTGK-LHLGHYVGSLKNRVFLQNENKYKMFVFLADQQALTDHAKESELIQESIG 64
Query: 148 ENAKDIIACGFDVTKTFIF--SDFDYVG--GAFYKNMVKVAKCV---TYNKVVGIFGFTG 200
A D ++ G D ++ IF S + +Y N+V +A+ T + GF
Sbjct: 65 NVALDYLSVGLDPKQSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQKGFGE 124
Query: 201 EDHIGKVSFPPVQA--VPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIG- 257
G + +P QA + +F ++ L+P DQ P TR++
Sbjct: 125 SIPSGFLVYPVSQAADITAFKAN-------------LVPVGNDQKPMIEQTREIVRSFNH 171
Query: 258 -YHKPALIE----------SSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
YH L+E + P L G KMS S N IY++D A ++ K+
Sbjct: 172 TYHTDCLVEPEGIYPENEKAGRLPGLDG-NAKMSKSLGN-GIYLSDDADTVRKKVMSMYT 229
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFL--EDDAELEHIKKEYGAGGMLTGEVKQRLA 364
+E ++ N+ YL F ED A++E +K+ Y GG+ G+VK +
Sbjct: 230 DPNHIKIEDPGQIEGNM----VFHYLDIFARKEDQADIEAMKEHYQRGGL--GDVKTK-- 281
Query: 365 KVLTELVER 373
+ L +++ER
Sbjct: 282 RYLLDILER 290
>sp|Q5X9A2|SYW_STRP6 Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=trpS PE=3 SV=2
Length = 340
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 128/309 (41%), Gaps = 47/309 (15%)
Query: 88 LYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
+ TG P+ + LHLGH V + +LQ+ K + + L D + E Q
Sbjct: 6 ILTGDRPTGK-LHLGHYVGSLKNRVFLQNENKYKMFVFLADQQALTDHAKESELIQESIG 64
Query: 148 ENAKDIIACGFDVTKTFIF--SDFDYVG--GAFYKNMVKVAKCV---TYNKVVGIFGFTG 200
A D ++ G D ++ IF S + +Y N+V +A+ T + GF
Sbjct: 65 NVALDYLSVGLDPKQSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQKGFGE 124
Query: 201 EDHIGKVSFPPVQA--VPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIG- 257
G + +P QA + +F ++ L+P DQ P TR++
Sbjct: 125 SIPSGFLVYPVSQAADITAFKAN-------------LVPVGNDQKPMIEQTREIVRSFNH 171
Query: 258 -YHKPALIE----------SSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
YH L+E + P L G KMS S N IY++D A ++ K+
Sbjct: 172 TYHTDCLVEPEGIYPENEKAGRLPGLDG-NAKMSKSLGN-GIYLSDDADTVRKKVMSMYT 229
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFL--EDDAELEHIKKEYGAGGMLTGEVKQRLA 364
+E ++ N+ YL F ED A++E +K+ Y GG+ G+VK +
Sbjct: 230 DPNHIKIEDPGQIEGNM----VFHYLDIFARKEDQADIEAMKEHYQRGGL--GDVKTK-- 281
Query: 365 KVLTELVER 373
+ L +++ER
Sbjct: 282 RYLLDILER 290
>sp|P0DG60|SYW_STRP3 Tryptophan--tRNA ligase OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=trpS PE=3 SV=1
Length = 340
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 128/309 (41%), Gaps = 47/309 (15%)
Query: 88 LYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
+ TG P+ + LHLGH V + +LQ+ K + + L D + E Q
Sbjct: 6 ILTGDRPTGK-LHLGHYVGSLKNRVFLQNENKYKMFVFLADQQALTDHAKESELIQESIG 64
Query: 148 ENAKDIIACGFDVTKTFIF--SDFDYVG--GAFYKNMVKVAKCV---TYNKVVGIFGFTG 200
A D ++ G D ++ IF S + +Y N+V +A+ T + GF
Sbjct: 65 NVALDYLSVGLDPKQSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEIAQKGFGE 124
Query: 201 EDHIGKVSFPPVQA--VPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIG- 257
G + +P QA + +F ++ L+P DQ P TR++
Sbjct: 125 SIPSGFLVYPVSQAADITAFKAN-------------LVPVGNDQKPMIEQTREIVRSFNH 171
Query: 258 -YHKPALIE----------SSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
YH L+E + P L G KMS S N IY++D A ++ K+
Sbjct: 172 TYHTDCLVEPEGIYPENEKAGRLPGLDG-NAKMSKSLGN-GIYLSDDADTVRKKVMSMYT 229
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFFL--EDDAELEHIKKEYGAGGMLTGEVKQRLA 364
+E ++ N+ YL F ED A++E +K+ Y GG+ G+VK +
Sbjct: 230 DPNHIKIEDPGQIEGNM----VFHYLDIFARKEDQADIEAMKEHYQRGGL--GDVKTK-- 281
Query: 365 KVLTELVER 373
+ L +++ER
Sbjct: 282 RYLLDILER 290
>sp|O29482|SYY_ARCFU Tyrosine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558
/ VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=tyrS
PE=1 SV=1
Length = 323
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 56/317 (17%)
Query: 81 EKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVE 140
E EK Y G PS E +HLGH++ + F++ ++ L D + + + E
Sbjct: 28 ETKEKPRAYVGYEPSGE-IHLGHMMTVQKLMDLQEAGFEI--IVLLADIHAYLNEKGTFE 84
Query: 141 ESQRLARENAKDIIACGFDVTKT-FIFSDFDYVGGAFYKNMVKVAKCVTYNKV---VGIF 196
E +A N K IA G D ++ F+ + + +++K+A+ T N+ +
Sbjct: 85 EIAEVADYNKKVFIALGLDESRAKFVLGSEYQLSRDYVLDVLKMARITTLNRARRSMDEV 144
Query: 197 GFTGED-HIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPR 255
ED + ++ +P +QA+ HL G D L IDQ + R+ PR
Sbjct: 145 SRRKEDPMVSQMIYPLMQAL-----DIAHL--GVD----LAVGGIDQRKIHMLARENLPR 193
Query: 256 IGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINK-YAFSG------ 308
+GY P + + L G+ KMS+S N I V D + ++ KI K Y +G
Sbjct: 194 LGYSSPVCLHTPILVGLDGQ--KMSSSKGNY-ISVRDPPEEVERKIRKAYCPAGVVEENP 250
Query: 309 -------------GQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGML 355
G+ VE K G ++E Y SF E + +++ +G +
Sbjct: 251 ILDIAKYHILPRFGKIVVERDAKFGGDVE------YASF--------EELAEDFKSGQLH 296
Query: 356 TGEVKQRLAKVLTELVE 372
++K +AK L L+E
Sbjct: 297 PLDLKIAVAKYLNMLLE 313
>sp|Q978Y8|SYW_THEVO Tryptophan--tRNA ligase OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=trpS
PE=3 SV=1
Length = 426
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 24/242 (9%)
Query: 16 VVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLND 75
+++PW SSS DY++L +FG DQS D + H RR V R
Sbjct: 1 MINPW--SSSDFFDYERLKKEFGIS--DQS--DNID-------HFLFRRKVILGQRGFEY 47
Query: 76 ILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK 135
I A + KF + TG PS E +HLG+ + Y Q + I + D E +
Sbjct: 48 IKYAIDNKIKFNVMTGLMPSGE-MHLGNKSA-IDQVIYFQ-KLGGSVSIAVADLESYSTR 104
Query: 136 NLSVEESQRLAREN-AKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVG 194
+ +++++ +A E + IA G + + S V Y + N++
Sbjct: 105 GIPLDKAREIAIEKYILNYIAMGLQPCEIYFQSKNKDVQFLSYI----LGNWTNMNELKA 160
Query: 195 IFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAP 254
++GFT + I ++ P +QA + + + G ++P DQDP+ R+ RD+A
Sbjct: 161 LYGFTDSNDILHINAPLIQAADVLHTQLNN-YGGP--APTVVPVGFDQDPHIRLMRDLAK 217
Query: 255 RI 256
R+
Sbjct: 218 RM 219
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 261 PALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVELHRKLG 320
P+ L+G GKMS+S P+S I + D + K KI + A +GG+++ E RKLG
Sbjct: 299 PSATYQKLMKGLKG--GKMSSSVPDSLISMNDDVEEAKRKIMR-ALTGGRDTEEEQRKLG 355
Query: 321 ANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTG----EVKQRLAKVLTELVERHQV 376
E ++ ++DD + + +E +G + G E+ +++ L ++ E+ ++
Sbjct: 356 GEPEKCPVFDLYNYEIDDDKYVNEVFEECKSGKRMCGYCKREIADKMSIFLKDIKEKREI 415
Query: 377 ARAAVT 382
AR ++
Sbjct: 416 AREKLS 421
>sp|Q8TSI1|SYY_METAC Tyrosine--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=tyrS PE=3 SV=1
Length = 317
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 89 YTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARE 148
Y G PS + +H+GH++ + FK+ ++ L D + K ++EE +++A
Sbjct: 33 YVGYEPSGK-IHMGHVLTVNKLIDLQKAGFKITVL--LADVHAYLNKKGTLEEVRKIADY 89
Query: 149 NAKDIIACGFDVTKT-FIF-SDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGK 206
N + IA G D +T F++ SDF +G + N++K+++ VT N+ D +G+
Sbjct: 90 NRRCFIALGLDEEQTDFVYGSDFQ-LGAEYMLNVLKLSRAVTLNR-----AKRSMDEVGR 143
Query: 207 VSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCA---IDQDPYFRMTRDVAPRIGYHKPAL 263
P + +P L D + A IDQ + R+ +G+ P
Sbjct: 144 AMDDPTVSQMVYP-----LMQAIDIALLEVDVAVGGIDQRKIHMLARENLKSLGFETPIC 198
Query: 264 IESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINK 303
I + P L G G AS ++ I + D+ + I K K
Sbjct: 199 IHT---PILLGLDGTKMASSKDNFISIDDTGEDIYRKFKK 235
>sp|Q8PVK0|SYY_METMA Tyrosine--tRNA ligase OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=tyrS
PE=3 SV=1
Length = 317
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 89 YTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARE 148
Y G PS + +H+GH++ + FK+ ++ L D + + ++EE +++A
Sbjct: 33 YVGYEPSGK-IHMGHVLTVNKLIDLQKAGFKITVL--LADVHAYLNRKGTLEEVRKIADY 89
Query: 149 NAKDIIACGFDVTKT-FIF-SDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGK 206
N + IA G D +T F++ SDF +G + N++K+++ VT N+ D +G+
Sbjct: 90 NRRCFIALGLDEEQTDFVYGSDFQ-LGAEYMLNVLKLSRAVTLNR-----AKRSMDEVGR 143
Query: 207 VSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCA---IDQDPYFRMTRDVAPRIGYHKPAL 263
P + +P L D + A IDQ + R+ +G+ P
Sbjct: 144 AMDDPTVSQMVYP-----LMQAIDIALLEVDVAVGGIDQRKIHMLARENLKSLGFETPIC 198
Query: 264 IESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINK 303
I + P L G G AS ++ I V D+ + I K K
Sbjct: 199 IHT---PILLGLDGTKMASSKDNFISVDDTEEEIYRKFKK 235
>sp|Q46BQ5|SYY_METBF Tyrosine--tRNA ligase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=tyrS PE=3 SV=1
Length = 317
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 20/219 (9%)
Query: 89 YTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLARE 148
Y G PS + +H+GH++ + F++ ++ L D + + ++EE +++A
Sbjct: 33 YVGYEPSGK-IHMGHVLTVNKLIDLQKAGFEITVL--LADVHAYLNRKGTLEEVRKIADY 89
Query: 149 NAKDIIACGFDVTKTFIFSDFDYVGGAFYK-NMVKVAKCVTYNKVVGIFGFTGEDHIGKV 207
N + IA G D KT DY GA Y N++K+++ VT N+ D +G+
Sbjct: 90 NKRCFIALGLDKEKTNFVYGSDYQLGAEYMLNVLKLSRSVTLNR-----ARRSMDEVGRA 144
Query: 208 SFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCA---IDQDPYFRMTRDVAPRIGYHKPALI 264
P + +P L D + A IDQ + R+ +G+ P I
Sbjct: 145 MDDPTVSQMVYP-----LMQAIDIAMLGVDIAVGGIDQRKIHMLARENLKNLGFETPICI 199
Query: 265 ESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINK 303
+ P L G G AS + I V D+ + I K+ K
Sbjct: 200 HT---PILLGLDGTKMASSKENFISVDDTEEEIYRKLKK 235
>sp|P67596|SYW_STRR6 Tryptophan--tRNA ligase OS=Streptococcus pneumoniae (strain ATCC
BAA-255 / R6) GN=trpS PE=3 SV=1
Length = 341
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 124/309 (40%), Gaps = 47/309 (15%)
Query: 88 LYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
+ TG P+ + LH+GH V + LQ+ K + + L D + +
Sbjct: 6 ILTGDRPTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQTIVESIG 64
Query: 148 ENAKDIIACGFDVTKTFIF--SDFDYVG--GAFYKNMVKVAKC---VTYNKVVGIFGFTG 200
A D +A G D K+ IF S + +Y N+V +A+ T + GF
Sbjct: 65 NVALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEISQKGFGE 124
Query: 201 EDHIGKVSFPPVQA--VPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRI-- 256
G + +P QA + +F +++ +P DQ P TR++
Sbjct: 125 SIPTGFLVYPIAQAADITAFKANY-------------VPVGTDQKPMIEQTREIVRSFNN 171
Query: 257 GYHKPALIE----------SSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
Y+ L+E + P L G KMS S N+ IY+ D A ++ K+
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDG-NAKMSKS-LNNGIYLADDADTLRKKVMSMYT 229
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFF--LEDDAELEHIKKEYGAGGMLTGEVKQRLA 364
VE K+ N+ YL F ED E+ +K+ Y GG+ G+VK +
Sbjct: 230 DPDHIRVEDPGKIEGNM----VFHYLDVFGRPEDAQEIADMKERYQRGGL--GDVKTK-- 281
Query: 365 KVLTELVER 373
+ L E++ER
Sbjct: 282 RYLLEILER 290
>sp|P67595|SYW_STRPN Tryptophan--tRNA ligase OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=trpS PE=3 SV=1
Length = 341
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 124/309 (40%), Gaps = 47/309 (15%)
Query: 88 LYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
+ TG P+ + LH+GH V + LQ+ K + + L D + +
Sbjct: 6 ILTGDRPTGK-LHIGHYVGSLKNRVLLQEEDKYDMFVFLADQQALTDHAKDPQTIVESIG 64
Query: 148 ENAKDIIACGFDVTKTFIF--SDFDYVG--GAFYKNMVKVAKC---VTYNKVVGIFGFTG 200
A D +A G D K+ IF S + +Y N+V +A+ T + GF
Sbjct: 65 NVALDYLAVGLDPNKSTIFIQSQIPELAELSMYYMNLVSLARLERNPTVKTEISQKGFGE 124
Query: 201 EDHIGKVSFPPVQA--VPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRI-- 256
G + +P QA + +F +++ +P DQ P TR++
Sbjct: 125 SIPTGFLVYPIAQAADITAFKANY-------------VPVGTDQKPMIEQTREIVRSFNN 171
Query: 257 GYHKPALIE----------SSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAF 306
Y+ L+E + P L G KMS S N+ IY+ D A ++ K+
Sbjct: 172 AYNCDVLVEPEGIYPENERAGRLPGLDG-NAKMSKS-LNNGIYLADDADTLRKKVMSMYT 229
Query: 307 SGGQESVELHRKLGANLEVDIPVKYLSFF--LEDDAELEHIKKEYGAGGMLTGEVKQRLA 364
VE K+ N+ YL F ED E+ +K+ Y GG+ G+VK +
Sbjct: 230 DPDHIRVEDPGKIEGNM----VFHYLDVFGRPEDAQEIADMKERYQRGGL--GDVKTK-- 281
Query: 365 KVLTELVER 373
+ L E++ER
Sbjct: 282 RYLLEILER 290
>sp|O83640|SYW_TREPA Tryptophan--tRNA ligase OS=Treponema pallidum (strain Nichols)
GN=trpS PE=3 SV=1
Length = 337
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 128/327 (39%), Gaps = 52/327 (15%)
Query: 88 LYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
+ TG P+ LHLGH + T +Q + +I + E L R
Sbjct: 4 VLTGDRPTGR-LHLGHYAGSLGTRLRIQSEHECFFIIADLHTLTTRHGRAQLAELPALVR 62
Query: 148 ENAKDIIACGFDVTKTFIF--------SDFDYVGGAFYKNMVKVAKC--VTYNKVVGIFG 197
E D +ACG D + I+ ++ ++ + N+V V + + K +
Sbjct: 63 ELVLDYLACGIDAQRAVIYLQSAVPEVTELAFI----FANLVTVPRLQRIPSLKEMAQAA 118
Query: 198 FTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIG 257
E G + +P +QA + + HL +P D + + +TR+VA R
Sbjct: 119 NLSELPFGLLGYPVLQAA--------DILLARAHL---VPVGKDNESHVELTREVAKRFN 167
Query: 258 YHKPALIESSFFP----------ALQGETG--KMSASDPNSAIYVTDSAKAIKNKINKYA 305
+ FP L G G KMS S N AI+++D + ++ K+
Sbjct: 168 R-----LYGEVFPLPRALLSDCATLVGTDGQAKMSKSLGN-AIFLSDDEETVRRKVRAMY 221
Query: 306 FSGGQESVELHRKLGANLEVDIPV-KYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLA 364
+ ++ ++ N PV Y F + E+ H K+ Y AG + EVK LA
Sbjct: 222 TDPARTRADIPGRVEGN-----PVFAYHDAFNPNTDEVAHFKERYRAGRVGDTEVKDALA 276
Query: 365 KVLTELVERHQVARAAVTDEMVDAFMA 391
+ L +E + RA + E A++A
Sbjct: 277 RALNTFLEPIRARRAQL--EQQPAYLA 301
>sp|Q9HIW5|SYW_THEAC Tryptophan--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=trpS PE=3 SV=1
Length = 426
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 24/242 (9%)
Query: 16 VVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLND 75
+++PW SSS DY++L +FG ++ H RR + R ++
Sbjct: 1 MINPW--SSSDFFDYERLKREFGIGDMNVPF-----------DHFLFRRHLILGQRSIDY 47
Query: 76 ILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEKCMWK 135
I A + KF + TG PS E +HLG+ + + +V + + D E +
Sbjct: 48 IDYALKHHMKFNVMTGLMPSGE-MHLGNKSAIDQVIFFQKLGGRVSIAV--ADLESYSTR 104
Query: 136 NLSVEESQRLAREN-AKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVG 194
+S+E ++ +A E + IA G + + + S V Y + +++
Sbjct: 105 GISLERAREVAIEKYILNYIAMGLEPCEIYFQSRNSDVQFLAYM----LGNRTNMSELRS 160
Query: 195 IFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAP 254
++GFT + ++ P +QA + + G ++P DQDP+ R+ RD+A
Sbjct: 161 LYGFTDTHDLLHINAPLIQAADVLHTQMKK-YGGP--APTVVPVGFDQDPHLRLMRDLAK 217
Query: 255 RI 256
R+
Sbjct: 218 RM 219
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 252 VAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQE 311
+AP Y K L+G GKMS+S P+S I + D K + KI +GG++
Sbjct: 297 IAPSATYQK-------LMKGLKG--GKMSSSVPDSLISLNDDPKEARRKIMA-GMTGGRD 346
Query: 312 SVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTG----EVKQRLAKVL 367
+ E R+LG + ++ ++DD ++ + + G + G E+ R+A L
Sbjct: 347 TEEEQRRLGGEPDRCPIFDLYNYEIDDDKHVKEVYDDCRNGKRMCGFCKREIADRMASWL 406
Query: 368 TELVERHQVARAAVT 382
++L ++ + AR ++
Sbjct: 407 SDLSKKREEAREKLS 421
>sp|Q2NHE1|SYY_METST Tyrosine--tRNA ligase OS=Methanosphaera stadtmanae (strain DSM
3091) GN=tyrS PE=3 SV=1
Length = 318
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 26/221 (11%)
Query: 89 YTGRGPSSEALHLGHLVPFMFTNRYLQDA-FKVPLVIQLTDDEKCMWKNLSVEESQRLAR 147
Y G PS + +HLGH + + LQDA FK+ + I + + +++E +A+
Sbjct: 35 YVGFEPSGK-VHLGHALTIK-KMKTLQDAGFKITIFI--ANLHAYLNNKGTLDELNEVAK 90
Query: 148 ENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFT--GEDH-I 204
N K A G FI D + + + K AK T + E H +
Sbjct: 91 YNIKCFKALGLSEDTNFILGS-DRMTPEYITEVFKAAKLTTIQRAQRSMALVSRNETHDV 149
Query: 205 GKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIGYHKPALI 264
+ +P +QA+ G ++Q + R++ PR+GY P I
Sbjct: 150 AQTLYPIMQALDIHDLDADIAVGG-----------MEQRKIHMLAREILPRLGYRPPVCI 198
Query: 265 ESSFFPALQGETG--KMSASDPNSAIYVTDSAKAIKNKINK 303
P + G G KMS+S N I + D+ K IKNKINK
Sbjct: 199 H---IPLIHGTDGSDKMSSSKGN-FIAIDDTPKEIKNKINK 235
>sp|A6URQ1|SYY_METVS Tyrosine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=tyrS PE=3 SV=1
Length = 319
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 108/246 (43%), Gaps = 40/246 (16%)
Query: 72 DLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLTDDEK 131
++N++L ++GEK Y G PS + +HLGH + + FK+ +I L D
Sbjct: 27 EMNELLK--KEGEKI-AYIGFEPSGK-IHLGHYLQIKKMIDLQKAGFKI--IILLADLHA 80
Query: 132 CMWKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKN------MVKVAK 185
+ + ++EE + L EN K + G + +D+ Y G F N + K+A
Sbjct: 81 YLNQKGTMEEIRALGEENKKAFESMG-------LIADYVY-GSEFQLNEEYTIDVYKLAL 132
Query: 186 CVTYNKV---VGIFGFTGED-HIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCA-I 240
T N+ + + E+ + V +P +Q + HL + +
Sbjct: 133 ATTLNRAKRSMEVIAREDENPKVASVVYPLMQV------------NDIKHLNVDVAVGGM 180
Query: 241 DQDPYFRMTRDVAPRIGYHKPALIESSFFPALQGETGKMSASDPNSAIYVTDSAKAIKNK 300
+Q ++R++ P +GY P I + L GE GKMS+S N I V D IKNK
Sbjct: 181 EQRKIHMLSREILPNMGYKAPICIHNPILTGLDGE-GKMSSSKGN-LIAVDDDEVTIKNK 238
Query: 301 INKYAF 306
+ K AF
Sbjct: 239 L-KNAF 243
>sp|Q9YA64|SYY_AERPE Tyrosine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=tyrS PE=1 SV=1
Length = 364
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 127/326 (38%), Gaps = 57/326 (17%)
Query: 83 GEKFYLYTGRGPSSEALHLGHLVPFMFTNRYLQDAFKVPLVIQLT----DDEKCMWKNLS 138
G + Y G PS A H+G LV +M+ + L +A V++ T ++K
Sbjct: 33 GARIKGYIGYEPSGVA-HIGWLV-WMYKVKDLVEAGVDFSVLEATWHAYINDKLGGDMDL 90
Query: 139 VEESQRLARENAKDIIACGFDVTKTF------IFSDFDYVGGAFYKNMVKVAKCVTYNKV 192
+ + R+ R + A G V + + SD DY G + K A +
Sbjct: 91 IRAAARIVRRVME---AAGVPVERVRFVDAEELASDKDYWG--LVIRVAKRASLARVRRA 145
Query: 193 VGIFGFTGED---HIGKVSFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMT 249
+ I G E+ K+ +P +Q F G +DQ +
Sbjct: 146 LTIMGRRAEEAEVDASKLIYPLMQVSDIFYMDLDIALGG-----------MDQRKAHMLA 194
Query: 250 RDVAPRIGYHKPALIESSFFPALQG---------------ETGKMSASDPNSAIYVTDSA 294
RDVA ++G KP I + +LQG KMS S P +A++V DS
Sbjct: 195 RDVAEKLGRKKPVAIHTPIISSLQGPGRMEASQGEIDDVLAEVKMSKSKPETAVFVVDSD 254
Query: 295 KAIKNKINKYAFSG----GQESVELHRKL-----GANLEVDIPVKYLSFFLEDDAELEHI 345
I+ KI K G +E+ R + G L VD P KY + E +
Sbjct: 255 DDIRRKIRKAYCPAKQVQGNPVLEIARYILFARDGFTLRVDRPAKYGGPV--EYTSYEEL 312
Query: 346 KKEYGAGGMLTGEVKQRLAKVLTELV 371
+++Y G + ++K +A+ L E+V
Sbjct: 313 ERDYTDGRLHPLDLKNAVAESLIEVV 338
>sp|Q6L2J1|SYY_PICTO Tyrosine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027 /
DSM 9790 / JCM 10055 / NBRC 100828) GN=tyrS PE=3 SV=1
Length = 329
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 154 IACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKV---VGIFGFTGED---HIGKV 207
+A G + F+++ ++ ++KVAK + ++ + I G + ED K
Sbjct: 96 LAAGLNSNVKFVWASELVEKSDYWSLLLKVAKNASLLRIRRSLPIMGRSEEDADRDFSKY 155
Query: 208 SFPPVQAVPSFPSSFPHLFSGKDHLRCLIPCAIDQDPYFRMTRDVAPRIGYHKPALIESS 267
+P +Q F G +DQ + RD+A R+ KP + +
Sbjct: 156 IYPLMQVTDIFYLDVDFALGG-----------MDQRHAHMLARDIAERMNIKKPVSVHTP 204
Query: 268 FFPALQGET-----GKMSASDPNSAIYVTDSAKAIKNKINKYAFSGGQESVELHRKLGAN 322
+L+G KMS S+P+SAI++TDS IK KI K A+ +E + N
Sbjct: 205 LLSSLKGSGRMDSFKKMSKSEPDSAIFMTDSNDDIKRKI-KNAYCPMKE-------VNGN 256
Query: 323 LEVDIPVKYLSF-FLED--------------DAELEHIKKEYGAGGMLTGEVKQRLAKVL 367
+DI +KY+ F + D D +++ + + Y +G + ++K + ++L
Sbjct: 257 PVIDI-LKYIIFPYYNDKISIKRPESKGGPVDVDMDSLTRMYISGEIHPVDLKNAVGELL 315
Query: 368 TELV 371
+++
Sbjct: 316 CDII 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,400,909
Number of Sequences: 539616
Number of extensions: 6748120
Number of successful extensions: 20293
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 19862
Number of HSP's gapped (non-prelim): 402
length of query: 400
length of database: 191,569,459
effective HSP length: 120
effective length of query: 280
effective length of database: 126,815,539
effective search space: 35508350920
effective search space used: 35508350920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)