Query 015777
Match_columns 400
No_of_seqs 258 out of 1707
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 09:28:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015777.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015777hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02323 probable fructokinase 100.0 3.5E-51 7.6E-56 399.9 35.8 322 58-399 8-329 (330)
2 PLN02543 pfkB-type carbohydrat 100.0 3.2E-49 7E-54 399.2 37.3 319 60-398 125-490 (496)
3 KOG2855 Ribokinase [Carbohydra 100.0 4.8E-50 1E-54 377.0 27.5 316 58-398 7-327 (330)
4 PLN02967 kinase 100.0 2.7E-48 5.8E-53 395.9 34.1 316 60-395 196-545 (581)
5 PLN02341 pfkB-type carbohydrat 100.0 7.7E-48 1.7E-52 391.6 35.8 311 58-398 70-410 (470)
6 PRK09434 aminoimidazole ribosi 100.0 3.5E-46 7.7E-51 360.3 32.8 302 59-391 1-303 (304)
7 PRK11142 ribokinase; Provision 100.0 9.5E-46 2.1E-50 357.5 31.2 293 61-396 3-304 (306)
8 PTZ00292 ribokinase; Provision 100.0 1.9E-45 4.2E-50 358.7 32.8 301 58-396 13-325 (326)
9 PLN02813 pfkB-type carbohydrat 100.0 2.2E-45 4.9E-50 368.7 33.7 306 58-397 67-407 (426)
10 COG0524 RbsK Sugar kinases, ri 100.0 1.1E-44 2.4E-49 351.0 32.6 301 62-397 1-309 (311)
11 cd01167 bac_FRK Fructokinases 100.0 1.1E-44 2.4E-49 347.9 31.0 294 62-381 1-294 (295)
12 cd01168 adenosine_kinase Adeno 100.0 7.2E-45 1.6E-49 352.5 28.5 288 61-383 2-311 (312)
13 PRK15074 inosine/guanosine kin 100.0 2.9E-44 6.4E-49 358.9 31.9 332 25-391 2-426 (434)
14 cd01166 KdgK 2-keto-3-deoxyglu 100.0 6.3E-44 1.4E-48 342.4 31.6 291 62-381 1-293 (294)
15 cd01944 YegV_kinase_like YegV- 100.0 7.7E-44 1.7E-48 341.5 31.1 283 62-380 1-289 (289)
16 cd01174 ribokinase Ribokinase 100.0 9E-44 1.9E-48 341.2 31.4 283 62-387 1-292 (292)
17 PRK09850 pseudouridine kinase; 100.0 4E-43 8.7E-48 340.6 31.1 299 57-397 1-308 (313)
18 cd01945 ribokinase_group_B Rib 100.0 7.1E-43 1.5E-47 333.8 29.6 279 62-387 1-284 (284)
19 PTZ00247 adenosine kinase; Pro 100.0 1.3E-42 2.8E-47 341.5 27.6 289 59-383 4-336 (345)
20 PF00294 PfkB: pfkB family car 100.0 4.4E-43 9.5E-48 337.3 22.1 290 61-387 2-300 (301)
21 PLN02379 pfkB-type carbohydrat 100.0 1.3E-41 2.7E-46 336.2 32.6 299 60-395 19-355 (367)
22 cd01942 ribokinase_group_A Rib 100.0 5.1E-42 1.1E-46 326.9 28.7 270 62-381 1-278 (279)
23 TIGR02152 D_ribokin_bact ribok 100.0 6.7E-41 1.4E-45 321.7 29.9 284 67-392 1-293 (293)
24 PRK09954 putative kinase; Prov 100.0 1.1E-40 2.3E-45 329.9 32.0 323 29-397 29-361 (362)
25 cd01947 Guanosine_kinase_like 100.0 7.3E-41 1.6E-45 316.9 28.5 260 62-381 1-264 (265)
26 cd01940 Fructoselysine_kinase_ 100.0 3.5E-40 7.7E-45 312.0 30.1 263 62-381 1-263 (264)
27 cd01939 Ketohexokinase Ketohex 100.0 3.5E-40 7.5E-45 316.5 27.6 273 62-381 1-289 (290)
28 TIGR03828 pfkB 1-phosphofructo 100.0 1.4E-39 3.1E-44 313.9 30.8 287 65-398 4-302 (304)
29 TIGR02198 rfaE_dom_I rfaE bifu 100.0 6.3E-40 1.4E-44 318.2 27.4 292 59-396 6-315 (315)
30 cd01172 RfaE_like RfaE encodes 100.0 1.1E-39 2.3E-44 314.8 26.3 279 62-385 1-298 (304)
31 PRK09813 fructoselysine 6-kina 100.0 4.3E-39 9.4E-44 304.2 27.0 259 61-381 1-259 (260)
32 PRK13508 tagatose-6-phosphate 100.0 1.2E-38 2.5E-43 308.8 29.5 289 63-398 3-304 (309)
33 PRK09513 fruK 1-phosphofructok 100.0 3.1E-38 6.6E-43 306.2 31.4 289 63-398 5-306 (312)
34 cd01943 MAK32 MAK32 kinase. M 100.0 1.8E-39 4E-44 316.7 22.4 277 62-381 1-304 (328)
35 cd01941 YeiC_kinase_like YeiC- 100.0 2.1E-38 4.6E-43 303.3 27.0 276 62-378 1-288 (288)
36 PRK10294 6-phosphofructokinase 100.0 6.5E-38 1.4E-42 303.5 30.6 290 64-398 6-307 (309)
37 TIGR03168 1-PFK hexose kinase, 100.0 4E-38 8.7E-43 304.0 28.8 284 68-398 7-302 (303)
38 TIGR01231 lacC tagatose-6-phos 100.0 3.7E-38 8E-43 305.2 27.7 292 65-398 4-304 (309)
39 PLN02548 adenosine kinase 100.0 1.6E-37 3.4E-42 303.8 27.4 263 85-383 44-325 (332)
40 cd01164 FruK_PfkB_like 1-phosp 100.0 4.4E-37 9.5E-42 294.8 28.5 273 63-381 3-288 (289)
41 PRK11316 bifunctional heptose 100.0 8.8E-37 1.9E-41 312.3 28.6 288 61-396 11-313 (473)
42 PLN02630 pfkB-type carbohydrat 100.0 5.6E-36 1.2E-40 291.6 29.9 273 58-398 9-292 (335)
43 COG1105 FruK Fructose-1-phosph 100.0 1.2E-35 2.6E-40 279.8 27.6 285 68-398 8-304 (310)
44 cd01937 ribokinase_group_D Rib 100.0 9.3E-36 2E-40 280.3 26.4 254 62-377 1-254 (254)
45 cd01946 ribokinase_group_C Rib 100.0 2.5E-35 5.4E-40 281.0 25.4 273 62-382 1-276 (277)
46 KOG2854 Possible pfkB family c 100.0 7.4E-31 1.6E-35 244.4 21.7 288 62-387 8-338 (343)
47 COG2870 RfaE ADP-heptose synth 100.0 6.9E-30 1.5E-34 242.6 22.1 289 59-395 9-311 (467)
48 KOG2947 Carbohydrate kinase [C 100.0 1.7E-28 3.7E-33 218.2 20.2 281 58-381 2-298 (308)
49 cd00287 ribokinase_pfkB_like r 100.0 2.5E-27 5.5E-32 213.5 20.5 188 62-349 1-196 (196)
50 PRK12413 phosphomethylpyrimidi 99.8 1E-18 2.2E-23 164.6 17.4 150 223-379 83-243 (253)
51 cd01173 pyridoxal_pyridoxamine 99.8 1.5E-18 3.2E-23 163.5 17.7 165 204-377 71-250 (254)
52 PRK05756 pyridoxamine kinase; 99.8 6.3E-18 1.4E-22 162.0 18.1 167 203-378 72-255 (286)
53 PRK12412 pyridoxal kinase; Rev 99.8 1.4E-17 3.1E-22 158.1 19.8 161 206-378 73-246 (268)
54 TIGR00097 HMP-P_kinase phospho 99.8 2E-17 4.4E-22 155.8 19.4 161 205-378 67-240 (254)
55 TIGR00687 pyridox_kin pyridoxa 99.8 1.5E-17 3.2E-22 159.4 17.7 161 202-372 71-250 (286)
56 cd01169 HMPP_kinase 4-amino-5- 99.8 3.9E-17 8.5E-22 152.5 19.9 161 205-377 68-240 (242)
57 PRK07105 pyridoxamine kinase; 99.8 1.3E-17 2.8E-22 159.7 16.9 165 205-379 75-256 (284)
58 PRK06427 bifunctional hydroxy- 99.8 3.7E-17 8E-22 155.1 18.8 161 205-378 73-248 (266)
59 PRK08176 pdxK pyridoxal-pyrido 99.7 1.2E-16 2.6E-21 152.8 18.2 165 203-378 86-266 (281)
60 PRK08573 phosphomethylpyrimidi 99.7 1.8E-16 3.8E-21 160.9 19.8 159 206-377 72-243 (448)
61 PRK12616 pyridoxal kinase; Rev 99.7 8.8E-16 1.9E-20 145.9 19.1 162 205-378 74-249 (270)
62 PTZ00344 pyridoxal kinase; Pro 99.6 4E-14 8.6E-19 136.4 18.6 162 205-378 77-258 (296)
63 PTZ00347 phosphomethylpyrimidi 99.6 8.2E-14 1.8E-18 143.7 17.3 159 206-378 300-478 (504)
64 PLN02898 HMP-P kinase/thiamin- 99.6 1.3E-13 2.7E-18 142.2 17.8 162 205-379 78-254 (502)
65 KOG3009 Predicted carbohydrate 99.5 9.3E-14 2E-18 134.4 13.0 230 64-377 344-599 (614)
66 PLN02978 pyridoxal kinase 99.5 1E-12 2.2E-17 127.2 19.4 162 206-378 87-267 (308)
67 PRK14713 multifunctional hydro 99.5 1.6E-12 3.5E-17 134.7 16.8 159 205-376 98-270 (530)
68 cd01171 YXKO-related B.subtili 99.4 2.2E-12 4.8E-17 121.5 15.7 158 201-379 73-236 (254)
69 PRK09517 multifunctional thiam 99.4 2.4E-12 5.1E-17 138.4 16.8 160 205-378 310-484 (755)
70 PF08543 Phos_pyr_kin: Phospho 99.4 5.8E-12 1.3E-16 118.1 17.3 161 205-378 60-234 (246)
71 cd01170 THZ_kinase 4-methyl-5- 99.4 9.7E-12 2.1E-16 116.2 16.4 164 200-377 44-221 (242)
72 COG0351 ThiD Hydroxymethylpyri 99.4 4.1E-11 8.8E-16 111.1 18.0 161 205-377 72-244 (263)
73 TIGR00196 yjeF_cterm yjeF C-te 99.3 4.6E-11 9.9E-16 113.7 15.9 175 201-398 88-269 (272)
74 COG2240 PdxK Pyridoxal/pyridox 99.2 7.2E-10 1.6E-14 103.4 16.1 166 201-377 69-249 (281)
75 PRK09355 hydroxyethylthiazole 99.1 4.6E-09 1E-13 99.4 17.3 175 187-376 37-224 (263)
76 PTZ00493 phosphomethylpyrimidi 99.1 5.2E-09 1.1E-13 100.9 17.5 161 206-378 74-285 (321)
77 TIGR00694 thiM hydroxyethylthi 99.0 1.8E-08 3.9E-13 94.7 16.9 194 188-397 33-242 (249)
78 KOG2599 Pyridoxal/pyridoxine/p 98.5 6.3E-06 1.4E-10 75.9 14.7 161 202-370 78-255 (308)
79 KOG2598 Phosphomethylpyrimidin 98.2 2.1E-05 4.5E-10 76.8 12.2 162 205-377 92-282 (523)
80 PRK03979 ADP-specific phosphof 97.9 0.00043 9.3E-09 69.7 16.7 74 204-281 221-305 (463)
81 PRK14039 ADP-dependent glucoki 97.9 0.0014 3E-08 66.0 18.9 78 202-283 207-295 (453)
82 PF02110 HK: Hydroxyethylthiaz 97.9 0.0014 3.1E-08 61.0 17.6 146 201-353 45-203 (246)
83 TIGR02045 P_fruct_ADP ADP-spec 97.8 0.0042 9.2E-08 62.4 20.4 153 201-396 205-382 (446)
84 PRK14038 ADP-dependent glucoki 97.6 0.0043 9.3E-08 62.4 17.3 149 201-397 220-389 (453)
85 PRK10565 putative carbohydrate 97.5 0.003 6.5E-08 65.4 16.2 146 202-371 317-468 (508)
86 COG2145 ThiM Hydroxyethylthiaz 97.4 0.0089 1.9E-07 55.4 16.0 159 187-353 38-209 (265)
87 PF04587 ADP_PFK_GK: ADP-speci 97.4 0.0025 5.5E-08 64.7 13.7 78 201-282 205-292 (444)
88 PF01256 Carb_kinase: Carbohyd 97.3 0.011 2.3E-07 55.3 15.5 169 201-395 63-240 (242)
89 KOG3974 Predicted sugar kinase 96.9 0.014 3E-07 53.9 11.7 141 200-346 96-238 (306)
90 cd01938 ADPGK_ADPPFK ADP-depen 96.7 0.0097 2.1E-07 60.2 10.2 163 88-281 101-285 (445)
91 COG0063 Predicted sugar kinase 96.6 0.11 2.4E-06 49.6 15.9 174 201-398 97-280 (284)
92 PRK10076 pyruvate formate lyas 85.7 5.1 0.00011 36.6 8.7 75 222-304 53-132 (213)
93 KOG4184 Predicted sugar kinase 77.7 6.3 0.00014 38.4 6.3 74 205-282 238-317 (478)
94 COG4809 Archaeal ADP-dependent 74.4 42 0.00091 33.4 10.9 80 201-284 221-310 (466)
95 COG1180 PflA Pyruvate-formate 73.0 24 0.00052 33.3 9.0 90 205-304 83-177 (260)
96 COG1618 Predicted nucleotide k 71.3 72 0.0016 28.0 11.1 59 125-184 6-68 (179)
97 TIGR00334 5S_RNA_mat_M5 ribonu 65.7 56 0.0012 28.8 8.9 83 205-297 22-107 (174)
98 PRK06702 O-acetylhomoserine am 64.8 51 0.0011 33.6 9.9 43 225-276 166-208 (432)
99 COG1922 WecG Teichoic acid bio 53.3 49 0.0011 31.1 6.9 98 201-309 60-171 (253)
100 TIGR00696 wecB_tagA_cpsF bacte 50.8 85 0.0019 27.7 7.8 77 222-309 34-110 (177)
101 TIGR02494 PFLE_PFLC glycyl-rad 45.9 1.2E+02 0.0027 28.6 8.8 74 222-303 140-218 (295)
102 COG0144 Sun tRNA and rRNA cyto 42.4 1.8E+02 0.004 28.7 9.5 47 88-155 163-209 (355)
103 PRK15452 putative protease; Pr 40.7 1.5E+02 0.0032 30.4 8.6 82 196-278 14-102 (443)
104 COG0269 SgbH 3-hexulose-6-phos 40.0 1.7E+02 0.0036 26.9 7.9 95 202-308 77-172 (217)
105 PF03808 Glyco_tran_WecB: Glyc 37.7 1.3E+02 0.0029 26.1 7.0 79 222-310 34-112 (172)
106 PF00070 Pyr_redox: Pyridine n 35.9 53 0.0011 24.3 3.6 47 96-155 11-57 (80)
107 PRK11145 pflA pyruvate formate 34.4 2.9E+02 0.0064 25.2 9.1 75 222-302 85-164 (246)
108 cd07381 MPP_CapA CapA and rela 34.4 3.6E+02 0.0078 24.5 11.0 46 98-158 68-113 (239)
109 PRK08134 O-acetylhomoserine am 33.6 2.5E+02 0.0054 28.5 9.1 42 225-275 168-209 (433)
110 PHA00438 hypothetical protein 33.6 33 0.00071 25.8 2.0 17 334-350 47-63 (81)
111 cd00757 ThiF_MoeB_HesA_family 32.7 3.2E+02 0.007 24.8 9.0 112 90-241 27-141 (228)
112 PRK05967 cystathionine beta-ly 32.0 3.5E+02 0.0077 27.1 9.8 41 205-246 149-189 (395)
113 COG0826 Collagenase and relate 31.9 3E+02 0.0066 27.1 9.0 81 201-282 22-108 (347)
114 PF13986 DUF4224: Domain of un 31.2 57 0.0012 22.1 2.7 32 271-304 2-33 (47)
115 PRK08223 hypothetical protein; 31.0 4.1E+02 0.0088 25.5 9.5 116 89-242 32-150 (287)
116 PRK08133 O-succinylhomoserine 30.4 2.5E+02 0.0054 27.9 8.4 21 225-245 165-185 (390)
117 PRK09028 cystathionine beta-ly 30.1 3.2E+02 0.007 27.4 9.1 43 204-247 145-187 (394)
118 PRK05973 replicative DNA helic 29.9 3.5E+02 0.0075 25.1 8.6 104 96-244 81-191 (237)
119 PRK06901 aspartate-semialdehyd 29.7 2.3E+02 0.005 27.6 7.6 85 135-244 11-95 (322)
120 PF10911 DUF2717: Protein of u 29.2 43 0.00092 25.2 1.9 18 333-350 46-63 (77)
121 COG0136 Asd Aspartate-semialde 28.6 4.5E+02 0.0097 25.8 9.4 88 135-244 10-97 (334)
122 TIGR02826 RNR_activ_nrdG3 anae 28.3 1.6E+02 0.0035 25.1 5.7 49 220-277 72-120 (147)
123 TIGR02355 moeB molybdopterin s 27.9 4.1E+02 0.0088 24.6 8.8 113 90-242 30-145 (240)
124 PRK05968 hypothetical protein; 27.8 3.6E+02 0.0079 26.7 9.1 41 204-245 146-186 (389)
125 PF01212 Beta_elim_lyase: Beta 27.2 70 0.0015 30.6 3.6 39 206-244 125-166 (290)
126 PLN02572 UDP-sulfoquinovose sy 26.9 1.4E+02 0.003 30.4 6.0 25 91-115 55-79 (442)
127 PRK05690 molybdopterin biosynt 26.9 5E+02 0.011 24.0 9.3 111 91-241 39-152 (245)
128 PF10087 DUF2325: Uncharacteri 26.3 1.2E+02 0.0026 23.6 4.3 39 201-243 44-82 (97)
129 PLN03209 translocon at the inn 26.0 2.5E+02 0.0055 29.8 7.7 24 92-115 89-112 (576)
130 TIGR01328 met_gam_lyase methio 25.9 3.9E+02 0.0085 26.6 8.9 41 205-246 144-184 (391)
131 TIGR02045 P_fruct_ADP ADP-spec 25.8 42 0.0009 34.2 1.8 22 90-111 86-107 (446)
132 COG2248 Predicted hydrolase (m 25.6 4.8E+02 0.01 24.7 8.4 80 163-244 161-247 (304)
133 COG0206 FtsZ Cell division GTP 25.6 4.6E+02 0.0099 25.8 8.9 79 201-281 91-174 (338)
134 cd00562 NifX_NifB This CD repr 25.5 1.1E+02 0.0023 23.6 3.9 39 93-155 47-85 (102)
135 cd00614 CGS_like CGS_like: Cys 25.3 2.6E+02 0.0056 27.5 7.4 40 205-245 125-164 (369)
136 PRK07050 cystathionine beta-ly 25.2 5.9E+02 0.013 25.4 10.0 41 205-246 150-190 (394)
137 PRK07810 O-succinylhomoserine 25.1 6E+02 0.013 25.4 10.1 43 205-248 155-197 (403)
138 cd05014 SIS_Kpsf KpsF-like pro 24.5 2.2E+02 0.0048 22.8 5.8 40 288-327 63-102 (128)
139 PRK05613 O-acetylhomoserine am 24.4 5.5E+02 0.012 26.1 9.7 21 225-245 174-194 (437)
140 PRK15447 putative protease; Pr 24.2 6.3E+02 0.014 24.2 9.7 74 204-281 27-104 (301)
141 PF01118 Semialdhyde_dh: Semia 24.1 2E+02 0.0043 23.2 5.4 43 198-248 59-101 (121)
142 COG2200 Rtn c-di-GMP phosphodi 23.9 5.7E+02 0.012 23.7 9.1 55 223-285 136-190 (256)
143 PRK14852 hypothetical protein; 23.8 5.1E+02 0.011 29.4 9.8 38 89-129 337-374 (989)
144 PRK14851 hypothetical protein; 23.8 5.2E+02 0.011 28.1 9.7 38 89-129 48-85 (679)
145 TIGR01093 aroD 3-dehydroquinat 23.7 5.6E+02 0.012 23.3 10.3 95 206-314 93-194 (228)
146 PLN00128 Succinate dehydrogena 23.2 1.2E+02 0.0026 32.6 4.8 26 91-116 57-82 (635)
147 KOG0257 Kynurenine aminotransf 23.0 1.3E+02 0.0029 30.2 4.7 57 188-244 155-213 (420)
148 PRK14039 ADP-dependent glucoki 22.8 53 0.0011 33.6 1.9 26 87-112 85-110 (453)
149 PRK15116 sulfur acceptor prote 22.6 6.6E+02 0.014 23.7 9.2 26 89-114 35-61 (268)
150 cd06533 Glyco_transf_WecG_TagA 22.5 3.8E+02 0.0081 23.3 7.1 18 224-241 34-51 (171)
151 PRK08247 cystathionine gamma-s 22.5 4.5E+02 0.0098 25.7 8.6 40 205-245 136-175 (366)
152 TIGR01826 CofD_related conserv 22.4 5.7E+02 0.012 24.8 8.8 77 201-277 168-251 (310)
153 PF04016 DUF364: Domain of unk 22.1 1.7E+02 0.0037 24.9 4.7 42 199-244 56-97 (147)
154 PF00919 UPF0004: Uncharacteri 21.4 3.2E+02 0.0069 21.5 5.8 60 204-271 35-97 (98)
155 PF11469 Ribonucleas_3_2: Ribo 20.9 1.5E+02 0.0033 23.8 3.7 32 330-367 52-83 (120)
156 COG1433 Uncharacterized conser 20.6 1.4E+02 0.0031 24.6 3.7 43 89-155 47-89 (121)
157 COG0169 AroE Shikimate 5-dehyd 20.4 7.5E+02 0.016 23.6 10.6 45 88-153 130-175 (283)
158 PF09587 PGA_cap: Bacterial ca 20.2 1.5E+02 0.0032 27.5 4.3 45 99-158 67-111 (250)
No 1
>PLN02323 probable fructokinase
Probab=100.00 E-value=3.5e-51 Score=399.90 Aligned_cols=322 Identities=80% Similarity=1.267 Sum_probs=283.3
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.++++|+++|++++|++..+++.+......+...+||++.|+|++|+|||.++.++|. +|+
T Consensus 8 ~~~~~i~~iG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~ 68 (330)
T PLN02323 8 AESSLVVCFGEMLIDFVPTVSGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGK-------------------VGD 68 (330)
T ss_pred CCCCcEEEechhhhhhccCCCCCCcccccceeecCCChHHHHHHHHHhcCCceeEEEE-------------------ecC
Confidence 4567899999999999998877776666777899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++.+.++.+|+.+++.++++|+|++.+++..+++..+++++++.+.++.++++|++++...
T Consensus 69 D~~g~~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (330)
T PLN02323 69 DEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDLDLIRKAKIFHYGSISLI 148 (330)
T ss_pred ChhHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCChHHHccCCEEEEechhcc
Confidence 99999999999999999999999888899999999998999999888666676678888887778899999999887665
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
.+.......++++.+++.|+++++|++++...|.+.+..++.+.++++++|++++|++|+..+++....+.++.. +++.
T Consensus 149 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~-~~~~ 227 (330)
T PLN02323 149 TEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGDDPDDDTVV-KLWH 227 (330)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCccHHHHH-HHHh
Confidence 555556677889999999999999999988888777777788888999999999999999999987655443444 5556
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|++.||||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++...+++++++|+++|+++|+++|+
T Consensus 228 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~Agfl~~l~~g~~~~~~~~~l~~al~~a~a~Aa~~v~ 307 (330)
T PLN02323 228 PNLKLLLVTEGEEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANACGAITTT 307 (330)
T ss_pred cCCCEEEEecCCCceEEEeCCCceEeCCccCCCCCCCCcHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999998877899999999999999999999999999999986333345689999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHhCCC
Q 015777 378 ERGAIPALPTREAVLNAIHAPV 399 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~~~l~~~~ 399 (400)
+.|+..++|+++++++++++-+
T Consensus 308 ~~g~~~~~~~~~~v~~~l~~~~ 329 (330)
T PLN02323 308 ERGAIPALPTKEAVLKLLKKAV 329 (330)
T ss_pred ccCCccCCCCHHHHHHHHHHhc
Confidence 9999888999999999988754
No 2
>PLN02543 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=3.2e-49 Score=399.20 Aligned_cols=319 Identities=38% Similarity=0.621 Sum_probs=264.9
Q ss_pred CCcEEEEccceeecccCcCCCCc--c------------CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccce
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSL--A------------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHV 125 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~--~------------~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~ 125 (400)
++.|+|||++++|++........ . +...+...+||+++|+|++++|||.++.++|.
T Consensus 125 ~~~v~~~Ge~liDf~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~GGa~aNVAvaLARLG~~vafIG~---------- 194 (496)
T PLN02543 125 PPLVCCFGAVQKEFVPTVRVHDNQMHPDMYSQWKMLQWDPPEFARAPGGPPSNVAISHVRLGGRAAFMGK---------- 194 (496)
T ss_pred CCeEEEeChhhhhhcCCCcccccccccccccccccccccCCeeEeccCcHHHHHHHHHHHCCCCEEEEEE----------
Confidence 45699999999999986432111 0 45678899999999999999999999999999
Q ss_pred eeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEc--CCCCeeEEEecCCCccccCCccccchhhc
Q 015777 126 KVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR--SDGEREFMFYRNPSADMLLQEAELDLSLI 203 (400)
Q Consensus 126 ~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~--~~g~r~~~~~~~~~~~~~l~~~~l~~~~i 203 (400)
||+|.+|+++++.|+++||+++++.+.++.+|+.+++.++ .+| +.+.+++..+++..+..++++.+.+
T Consensus 195 ---------VGdD~fG~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~g-r~~~~~~~~gA~~~L~~~di~~~~l 264 (496)
T PLN02543 195 ---------VGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGG-KMVAETVKEAAEDSLLASELNLAVL 264 (496)
T ss_pred ---------eCCCHHHHHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCC-CEEEEecCCCHHHhCChhhcCHhHh
Confidence 9999999999999999999999999998889999999885 445 5565445566777888888888889
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCC
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 283 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~ 283 (400)
++++++|++++.+..++..+...++++.+++.|++|+||+++|+.+|.+.+..++.+.++++++||+++|++|++.|+|.
T Consensus 265 ~~a~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~ 344 (496)
T PLN02543 265 KEARMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDE 344 (496)
T ss_pred CCCceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCC
Confidence 99999999998776666678889999999999999999999999999887778888889999999999999999999986
Q ss_pred CC--------Cc------------------HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccc-----cccccC
Q 015777 284 ED--------PY------------------DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL-----KVEAVD 332 (400)
Q Consensus 284 ~~--------~~------------------~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~-----~v~vvD 332 (400)
.. +. ..+.+..++..|++.||||+|++|++++.++....++.. +..+||
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~~~~VD 424 (496)
T PLN02543 345 DYYERKRNYPPQYYAESFEQTKNWRDYYHYTPEEIAPLWHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLITPFTCD 424 (496)
T ss_pred CcccccccccchhhhhhhhhhhcccccccCCHHHHHHHHHCCCCEEEEEcCCCcEEEEECCCcccccccccccCCCCCcC
Confidence 41 00 112345677789999999999999999986432222211 122589
Q ss_pred CCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 333 ATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 333 ttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
||||||+|+|||+++|+++.....+++++++|++||+++||++|++.|+.+++|++++|+++++++
T Consensus 425 TTGAGDAF~AGfL~~Ll~~~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev~~~~~~~ 490 (496)
T PLN02543 425 RTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRGFPTESATQNLKEQV 490 (496)
T ss_pred CCchHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHhh
Confidence 999999999999999996322222223399999999999999999999999999999999999885
No 3
>KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.8e-50 Score=377.04 Aligned_cols=316 Identities=56% Similarity=0.897 Sum_probs=290.5
Q ss_pred CCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
.+++.|+|||++++|+++.+++.|.+ +++.+...+||+++|+|++++|||.++.+||+
T Consensus 7 ~~~~~vv~fGs~~~D~V~~~~~~p~~ge~~~~~~f~~~~GG~~aN~AvaaarLG~~~afiGk------------------ 68 (330)
T KOG2855|consen 7 GEPPLVVVFGSMLIDFVPSTRRLPNAGETWEPPGFKTAPGGKGANQAVAAARLGGRVAFIGK------------------ 68 (330)
T ss_pred cCCceEEEeccceeeeeeccccCCCccccccCCcceecCCCcchhhhhHHHhcCcceeeeec------------------
Confidence 45678999999999999999999988 78999999999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGS 213 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~ 213 (400)
||+|.||+.+++.|+++||+++++..+++.+|+.+.+.+..+|++.++++++++.++.+.+.++..+.++.++++|+.+
T Consensus 69 -vGdD~fG~~l~~~L~~~~V~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se~~~~~i~~ak~~~~q~ 147 (330)
T KOG2855|consen 69 -VGDDEFGDDLLDILKQNGVDTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSELNLEVIKEAKVFHCQS 147 (330)
T ss_pred -ccchhhHHHHHHHHhhCCcccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCcccccccHHHHhhccEEEEee
Confidence 9999999999999999999999999999999999999999999999999998888888888888889999999999998
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHH
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVY 293 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 293 (400)
..+.....+......++.+++.+..+++||+.+.++|++....+..+..++..+|++..+++|+..++|... ++..
T Consensus 148 ei~~~~~~~s~~~~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~~~---~~~~- 223 (330)
T KOG2855|consen 148 EILIEEPMRSLHIAAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGIED---DKIL- 223 (330)
T ss_pred ecCCcchhHHHHHhhhhhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccCcc---chHH-
Confidence 887777777666666888999999999999999999998777777788899999999999999999999833 2334
Q ss_pred HHHhCCCcEEEEEecCCcEEEEeCCceE-EEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 294 KLFHANLKLLLVTEGPDGCRYYTKDFSG-RVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 294 ~l~~~g~~~vvvT~G~~G~~~~~~~~~~-~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
.|++.+.+.||||+|++||+||+++... ++|+.+|++||||||||+|+|||+.+|.+| ++.. ...+++++++|++++
T Consensus 224 ~L~~~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~V~~VDtTGAGDsFvgal~~~L~~~-~~~~-~~~L~~~l~~A~a~~ 301 (330)
T KOG2855|consen 224 KLWHMKLKLVIVTLGEKGCRYYTKDFKGSHVPAFKVKAVDTTGAGDSFVGALAVQLVRG-SLLP-ELSLEEALRFANACG 301 (330)
T ss_pred HHhccCCCEEEEEeCCCceEEEecCCCCCCCCCcccccccCCCchHHHHHHHHHHHhhc-cccc-hHHHHHHHHHHHHhh
Confidence 8888888999999999999999998666 999999999999999999999999999999 6544 778999999999999
Q ss_pred HHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 373 ALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 373 a~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++++++|+++++|+++++++.+..-
T Consensus 302 ai~v~~~Ga~~s~p~~~~~~~~~~~~ 327 (330)
T KOG2855|consen 302 AITVQRKGAIPSMPTEKEVQSLLKSS 327 (330)
T ss_pred hHHhhccCCCccCccHHHHHHHhhhc
Confidence 99999999999999999999987654
No 4
>PLN02967 kinase
Probab=100.00 E-value=2.7e-48 Score=395.92 Aligned_cols=316 Identities=31% Similarity=0.558 Sum_probs=265.9
Q ss_pred CCcEEEEccceeecccCcCCCC--------------ccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccce
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLS--------------LAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHV 125 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~--------------~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~ 125 (400)
.+.|+|||++++|+++...... ..+...+...+||++.|+|++|+|||.++.|+|.
T Consensus 196 ~~~V~~iGe~l~D~~p~g~~~~~l~~~~~~~~~~~~~s~~~~~~~~~GGa~aNVAvaLARLG~~v~fIg~---------- 265 (581)
T PLN02967 196 PPLVCCFGAAQHAFVPSGRPANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALASLGGKVAFMGK---------- 265 (581)
T ss_pred CCeEEEECchhheecccCccchhhhhccccccccccccCccceeeecCcHHHHHHHHHHHCCCCEEEEEE----------
Confidence 4569999999999987422110 0135667888999999999999999999999999
Q ss_pred eeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCC
Q 015777 126 KVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITK 205 (400)
Q Consensus 126 ~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~ 205 (400)
||+|.+|+++++.|+++||++++++..++.+|+.+++.++++|++.+.+ +.++++..+..++++.+.+.+
T Consensus 266 ---------VGdD~~G~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~-~~~gAd~~L~~~di~~~~l~~ 335 (581)
T PLN02967 266 ---------LGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTC-VKPCAEDSLSKSEINIDVLKE 335 (581)
T ss_pred ---------eCCCHHHHHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEE-ecCChhhhCChhhcCHhHhcC
Confidence 9999999999999999999999999988889999999999999988753 346777888888888788899
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED 285 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~ 285 (400)
++++|++++.+..+.....+.++++.++++|++|+||+|+|..+|.+.+.+++.+.++++++|||++|++|+..|+|...
T Consensus 336 A~i~hfgg~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~ 415 (581)
T PLN02967 336 AKMFYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEP 415 (581)
T ss_pred CCEEEEeCchhcccchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCc
Confidence 99999999876666667889999999999999999999999999987777778888999999999999999999998643
Q ss_pred Cc---------------HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCc---eEEEcccccc--ccCCCCchHHHHHHHH
Q 015777 286 PY---------------DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDF---SGRVQGLKVE--AVDATGAGDAFVAGIL 345 (400)
Q Consensus 286 ~~---------------~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~---~~~vpa~~v~--vvDttGAGDaF~Agfl 345 (400)
.. ..+.+..++..|++.|+||+|++|++++.++. ...+++++++ +||||||||+|+|||+
T Consensus 416 ~~e~~~~~~~~~~~~~~~~e~a~~l~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V~V~vVDTTGAGDAF~AGfL 495 (581)
T PLN02967 416 TEEFDTKDNDKSKFVHYSPEVVAPLWHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPITPFTSDMSASGDGIVAGLM 495 (581)
T ss_pred cccccccccchhccccchHHHHHHHHhCCCCEEEEEECccceEEEECCCceeEeeccCCCCCCCCCCCCchhHHHHHHHH
Confidence 11 12345567778999999999999999998764 3344556666 5999999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
++|+++..+....+++++|++||+++||++++..|+++++|++++|++..
T Consensus 496 ~~Ll~g~~~~~g~~~LeeaLrfAnAaAAL~vt~~GA~~glPt~~eV~~~~ 545 (581)
T PLN02967 496 RMLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRGFPPKEDMEDEV 545 (581)
T ss_pred HHHHhccCcccccccHHHHHHHHHHHHHHHhccCCCccCCCCHHHHhhhc
Confidence 99998522111123499999999999999999999999999999997654
No 5
>PLN02341 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=7.7e-48 Score=391.58 Aligned_cols=311 Identities=25% Similarity=0.315 Sum_probs=255.9
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCC---------------CCceecCCChHHHHHHHHHHcCCCceeeecccccccc
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAES---------------PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFY 122 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~---------------~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~ 122 (400)
.++++|+++|++++|++..+++.|.... ......+|| ++|+|++|++||.++.++|.
T Consensus 70 ~~~~~vl~lG~~~vD~i~~V~~lP~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvAvaLarLG~~v~lig~------- 141 (470)
T PLN02341 70 GKEIDVATLGNLCVDIVLPVPELPPPSREERKAYMEELAASPPDKKSWEAGG-NCNFAIAAARLGLRCSTIGH------- 141 (470)
T ss_pred cccccEEEECCcceeEEEecCCCCCCCHHHHHHHHHhhcccccccceecCCh-HHHHHHHHHHcCCCeEEEEE-------
Confidence 4557899999999999999998876532 234455788 68999999999999999999
Q ss_pred cceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecC--------CCCceEEEEEEcCCCCeeEEEecCCCcccc--
Q 015777 123 EHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDP--------GARTALAFVTLRSDGEREFMFYRNPSADML-- 192 (400)
Q Consensus 123 ~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~--------~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~-- 192 (400)
||+|.+|+++++.|+++||+++++...+ +..|+.++++++++|++.+....+......
T Consensus 142 ------------VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~~~~ 209 (470)
T PLN02341 142 ------------VGDEIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEPAFS 209 (470)
T ss_pred ------------ecCcHHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeeccccccccchh
Confidence 9999999999999999999999887665 357999999999999886543211111100
Q ss_pred -CC-ccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCC-CCCChHHHHHhHHhhhccCcE
Q 015777 193 -LQ-EAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP-LWPSADKAREGILSIWETADI 269 (400)
Q Consensus 193 -l~-~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~~~~~~~~~~ll~~~dv 269 (400)
+. ......+.++++|++|++++... +.+.+.+.++++.+++.|+++++|++++.. +|...+..++.+.++++++|+
T Consensus 210 ~~~~l~~~~~~~l~~adiv~lsg~~~~-~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~Di 288 (470)
T PLN02341 210 WISKLSAEAKMAIRQSKALFCNGYVFD-ELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMSDV 288 (470)
T ss_pred hhhcccHHHHhhhhcCCEEEEeceeCC-cCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhCCE
Confidence 00 00111356889999999887542 345677889999999999999999987643 344444445567889999999
Q ss_pred EEcCHhHHhcccCCCCCcHHHHHHHHHhCC--CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 270 IKISEEEISFLTQGEDPYDDAVVYKLFHAN--LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 270 l~~N~~E~~~l~~~~~~~~~~~~~~l~~~g--~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
+++|++|++.++|... .++.++.++..+ .+.||||+|++|++++++++.+++|++++++||||||||+|+|||+++
T Consensus 289 l~~Ne~Ea~~l~g~~~--~~~a~~~l~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v~vVDTtGAGDaF~Agfl~g 366 (470)
T PLN02341 289 LLLTSEEAEALTGIRN--PILAGQELLRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAAAIALG 366 (470)
T ss_pred EEecHHHHHHHhCCCC--HHHHHHHHHhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCCcCCCCCcCccHHHHHHHHHH
Confidence 9999999999998743 456777777776 589999999999999999988999999999999999999999999999
Q ss_pred HHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 348 LSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 348 l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|++ +++|+++|+++||++++..|+..++|++++++++|.+.
T Consensus 367 ll~G~~-------l~eal~~A~a~aA~~v~~~Ga~~~~p~~~ev~~~l~~~ 410 (470)
T PLN02341 367 YIHNLP-------LVNTLTLANAVGAATAMGCGAGRNVATLEKVLELLRAS 410 (470)
T ss_pred HHcCCC-------HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHHhc
Confidence 999999 99999999999999999999999999999999988764
No 6
>PRK09434 aminoimidazole riboside kinase; Provisional
Probab=100.00 E-value=3.5e-46 Score=360.32 Aligned_cols=302 Identities=40% Similarity=0.656 Sum_probs=260.0
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|+++|+++|++++|+++.. .......+||++.|+|++|++||.++.+++. +|+|
T Consensus 1 ~~~~il~iG~~~iD~~~~~-------~~~~~~~~GG~~~N~a~~l~~LG~~~~~v~~-------------------vG~D 54 (304)
T PRK09434 1 MMNKVWVLGDAVVDLIPEG-------ENRYLKCPGGAPANVAVGIARLGGESGFIGR-------------------VGDD 54 (304)
T ss_pred CCCcEEEecchheeeecCC-------CCceeeCCCChHHHHHHHHHHcCCCceEEEE-------------------ecCc
Confidence 3458999999999998541 1345678999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccC
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLIT 218 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~ 218 (400)
.+|+++++.|+++||+++++...++.+|+.+++.++++|+|++.+...+++...++.++++ .+++++++|++++....
T Consensus 55 ~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 132 (304)
T PRK09434 55 PFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDLP--PFRQGEWLHLCSIALSA 132 (304)
T ss_pred hHHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHhh--hhcCCCEEEEccccccC
Confidence 9999999999999999999988888899999999988899998766555555555555553 36789999999876655
Q ss_pred chhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh-
Q 015777 219 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH- 297 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~- 297 (400)
+..+....++++.++++|+++++|++.+...|...+.+++.+.++++++|++++|++|+..+++... .+++++.+.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~~~--~~~~~~~l~~~ 210 (304)
T PRK09434 133 EPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGTSQ--LEDAIYALADR 210 (304)
T ss_pred chHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCCCC--HHHHHHHHHhh
Confidence 5556677788999999999999999988888877777788888899999999999999999998653 4567777776
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.+++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++. .++.++++|+++|+++|+++++
T Consensus 211 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~f~ag~~~~l~~g~~~-~~~~~~~~a~~~a~~~Aa~~v~ 289 (304)
T PRK09434 211 YPIALLLVTLGAEGVLVHTRGQVQHFPAPSVDPVDTTGAGDAFVAGLLAGLSQAGLW-TDEAELAEIIAQAQACGALATT 289 (304)
T ss_pred cCCcEEEEEecCCceEEEeCCceeEeCCCCCCCCcCCCchHHHHHHHHHHHHcCCCc-cchHHHHHHHHHHHHHHHHHHc
Confidence 689999999999999999988889999999999999999999999999999999732 2334599999999999999999
Q ss_pred ccCCCCCCCCHHHH
Q 015777 378 ERGAIPALPTREAV 391 (400)
Q Consensus 378 ~~G~~~~~p~~~~l 391 (400)
+.|+..++|+++++
T Consensus 290 ~~g~~~~~~~~~~~ 303 (304)
T PRK09434 290 AKGAMTALPNRQEL 303 (304)
T ss_pred ccCCcCCCCChHHc
Confidence 99998889998775
No 7
>PRK11142 ribokinase; Provisional
Probab=100.00 E-value=9.5e-46 Score=357.46 Aligned_cols=293 Identities=28% Similarity=0.364 Sum_probs=252.8
Q ss_pred CcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
++|+|+|++++|++..+++.|.. ........+||++.|+|++|++||.++.++|. +|
T Consensus 3 ~~i~~iG~~~~D~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~~~~-------------------vG 63 (306)
T PRK11142 3 GKLVVLGSINADHVLNLESFPRPGETLTGRHYQVAFGGKGANQAVAAARLGADIAFIAC-------------------VG 63 (306)
T ss_pred CcEEEECCceeeEEEEeCCCCCCCCeeEeccceecCCCcHHHHHHHHHhcCCcEEEEEE-------------------EC
Confidence 46999999999999988887654 24566788999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEEccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSI 214 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~~~~ 214 (400)
+|.+|+.+++.|+++||+++++...++.+|+.+++.++.+|+|++.++. +....+++++++. +.+.+++++|+.+.
T Consensus 64 ~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~v~~~~~ 141 (306)
T PRK11142 64 DDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHA--GANAALTPALVEAHRELIANADALLMQLE 141 (306)
T ss_pred CChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECCCCCEEEEEeC--CccccCCHHHHHHHHhhhccCCEEEEeCC
Confidence 9999999999999999999999888888999999999989999988773 4555566666642 56889999998642
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHH
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAV 291 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~ 291 (400)
.+.+...++++.++++|+++++|++.... ...++++++|++++|++|++.+++....+. .+.
T Consensus 142 -----~~~~~~~~~~~~a~~~g~~v~~d~~~~~~----------~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~ 206 (306)
T PRK11142 142 -----TPLETVLAAAKIAKQHGTKVILNPAPARE----------LPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKA 206 (306)
T ss_pred -----CCHHHHHHHHHHHHHcCCEEEEECCCCcc----------cCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHH
Confidence 23467778899999999999999974322 123477899999999999999998654332 345
Q ss_pred HHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 292 VYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 292 ~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
++.+.+.|++.+|||+|++|++++.+++.+++|+++++++|||||||+|.|||++++++|++ +++|+++|+++
T Consensus 207 ~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDt~GAGDaF~Agfi~~l~~g~~-------~~~al~~a~~~ 279 (306)
T PRK11142 207 AQVLHQKGIETVLITLGSRGVWLSENGEGQRVPGFRVQAVDTIAAGDTFNGALVTALLEGKP-------LPEAIRFAHAA 279 (306)
T ss_pred HHHHHHhCCCeEEEEECCCcEEEEeCCcceeccCCCcccccCCCchhHHHHHHHHHHHCCCC-------HHHHHHHHHHH
Confidence 57777889999999999999999988888899999999999999999999999999999999 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 372 GALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
|+++|++.|+.+++|+++++++++.
T Consensus 280 Aa~~~~~~G~~~~~~~~~~~~~~~~ 304 (306)
T PRK11142 280 AAIAVTRKGAQPSIPWREEIDAFLQ 304 (306)
T ss_pred HHHHcCCCcccccCCCHHHHHHHHh
Confidence 9999999999888899999988765
No 8
>PTZ00292 ribokinase; Provisional
Probab=100.00 E-value=1.9e-45 Score=358.74 Aligned_cols=301 Identities=26% Similarity=0.342 Sum_probs=255.3
Q ss_pred CCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
+.+++|+|+|++++|++..+++.|.. ....+...+||.+.|+|++|+|||.++.++|.
T Consensus 13 ~~~~~vlviG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~is~------------------ 74 (326)
T PTZ00292 13 EAEPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGKGANQAVMASKLGAKVAMVGM------------------ 74 (326)
T ss_pred CCCCCEEEEccceeeEEEecCCCCCCCCceeecCceeCCCCcHHHHHHHHHHcCCCeEEEEE------------------
Confidence 45678999999999999998887654 23456788999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEc-CCCCeeEEEecCCCccccCCccccch--hhcCC-ccEE
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR-SDGEREFMFYRNPSADMLLQEAELDL--SLITK-AKIF 209 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~-~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~-~~~v 209 (400)
+|+|.+|+.+++.|+++||+++++...++.+|+.++++++ .+|+|+++++ +++...++++.++. ..+.. ++++
T Consensus 75 -vG~D~~g~~i~~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~--~g~~~~~~~~~~~~~~~~i~~~~~~~ 151 (326)
T PTZ00292 75 -VGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVII--PGANNALTPQMVDAQTDNIQNICKYL 151 (326)
T ss_pred -ECCChhHHHHHHHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEe--CCccccCCHHHHHHHHHHhhhhCCEE
Confidence 9999999999999999999999998888889999999998 7899998877 34555667666653 34666 8888
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH-
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD- 288 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~- 288 (400)
++.+. .+.+...++++.++++|+++++|++++...|. .+.+.++++++|++++|++|++.+++....+.
T Consensus 152 ~~~~~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~ 221 (326)
T PTZ00292 152 ICQNE-----IPLETTLDALKEAKERGCYTVFNPAPAPKLAE-----VEIIKPFLKYVSLFCVNEVEAALITGMEVTDTE 221 (326)
T ss_pred EECCC-----CCHHHHHHHHHHHHHcCCEEEEECCCCccccc-----cccHHHHHhcCCEEcCCHHHHHHHhCCCCCChh
Confidence 77541 23456778889999999999999987654332 25567788899999999999999998754322
Q ss_pred --HHHHHHHHhCCCcEEEEEecCCcEEEEeCCc-eEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHH
Q 015777 289 --DAVVYKLFHANLKLLLVTEGPDGCRYYTKDF-SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 365 (400)
Q Consensus 289 --~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~-~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al 365 (400)
.+..+.+.+.+++.|+||+|++|++++.+++ .+++|++++++||||||||+|+|||++++++|++ +++|+
T Consensus 222 ~~~~~~~~l~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al 294 (326)
T PTZ00292 222 SAFKASKELQQLGVENVIITLGANGCLIVEKENEPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKD-------LKESC 294 (326)
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCCcEEEEeCCCceEEccCCccccCCCcchHHHHHHHHHHHHHCCCC-------HHHHH
Confidence 2445677788999999999999999998765 4899999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 366 RFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 366 ~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
++|+++|++++++.|+...+|+++++++.++
T Consensus 295 ~~a~a~Aa~~v~~~G~~~~~~~~~~~~~~~~ 325 (326)
T PTZ00292 295 KRANRIAAISVTRHGTQSSYPHPSELPADVK 325 (326)
T ss_pred HHHHHHHHHHcCCCCccccCCCHHHHHHHhc
Confidence 9999999999999999988999999988765
No 9
>PLN02813 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=2.2e-45 Score=368.69 Aligned_cols=306 Identities=23% Similarity=0.248 Sum_probs=255.1
Q ss_pred CCCCcEEEEccceeecccCcCC-------CCccC-----------------CCCceecCCChHHHHHHHHHHcC------
Q 015777 58 RESPLVVCFGEMLIDFVPTVSG-------LSLAE-----------------SPAFKKAPGGAPANVAVGIARLG------ 107 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~-------~~~~~-----------------~~~~~~~~GG~~~N~A~~larLG------ 107 (400)
.++++|+++|++++|++..+++ .|+.. ...+...+||++.|+|++|+|||
T Consensus 67 ~~~~~vl~iG~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~~~~~~~~GG~~~N~AvalarLG~~~~~~ 146 (426)
T PLN02813 67 PERWDVLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKASAGGSLSNTLVALARLGSQSAAG 146 (426)
T ss_pred CCcceEEEeCCceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhccCceEecCcHHHHHHHHHHHhccccccC
Confidence 4678999999999999999887 55422 33567889999999999999999
Q ss_pred --CCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEec
Q 015777 108 --GSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYR 185 (400)
Q Consensus 108 --~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~ 185 (400)
.++.++|. ||+|.+|+++++.|++.||++.++.+ .+.+|+.+++.++++|+|+++.++
T Consensus 147 ~~~~v~~ig~-------------------VG~D~~G~~i~~~L~~~GVd~~~~~~-~~~~Tg~~~ilv~~~gertii~~~ 206 (426)
T PLN02813 147 PALNVAMAGS-------------------VGSDPLGDFYRTKLRRANVHFLSQPV-KDGTTGTVIVLTTPDAQRTMLSYQ 206 (426)
T ss_pred CCCcEEEEEE-------------------eCCChHHHHHHHHHHHcCCcccceec-CCCCceEEEEEEcCCCCceeeecc
Confidence 79999999 99999999999999999999998765 455899999999999999999885
Q ss_pred CCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHh-HHhhh
Q 015777 186 NPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREG-ILSIW 264 (400)
Q Consensus 186 ~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~-~~~ll 264 (400)
+ ++..++.+++..+.+++++++|+.++....+...+.+.++++.++++|+++++|+..... ....++. +..++
T Consensus 207 G--a~~~l~~~~~~~~~i~~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~----~~~~~~~l~~~ll 280 (426)
T PLN02813 207 G--TSSTVNYDSCLASAISKSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSC----IERHRDDFWDVMG 280 (426)
T ss_pred C--chhhCCccccCHHHHhcCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcch----hhhhHHHHHHHHH
Confidence 4 444566656666788999999998865433334567888999999999999999864211 1112222 33456
Q ss_pred ccCcEEEcCHhHHhcccCCCCC-cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHH
Q 015777 265 ETADIIKISEEEISFLTQGEDP-YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAG 343 (400)
Q Consensus 265 ~~~dvl~~N~~E~~~l~~~~~~-~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Ag 343 (400)
+++|++++|++|++.|++.... +.+++.+.+ ..+++.||||+|++|++++.+++.+++|++++++||||||||+|+||
T Consensus 281 ~~vDil~~Ne~Ea~~l~g~~~~~~~~~a~~~L-~~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v~vVDTtGAGDAF~Ag 359 (426)
T PLN02813 281 NYADILFANSDEARALCGLGSEESPESATRYL-SHFCPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAG 359 (426)
T ss_pred hcCCEEEeCHHHHHHHhCCCCCCCHHHHHHHH-HcCCCEEEEEeCCCCeEEEECCEEEEeCCCCCCcccCCChHHHHHHH
Confidence 8999999999999999986432 234444444 57899999999999999999998999999999999999999999999
Q ss_pred HHHHHHcCC-ccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 344 ILSQLSTDF-SLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 344 fl~~l~~g~-~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
|++++++|+ + +++|+++|+++|+++|++.|++.++|+.+++.+.+..
T Consensus 360 fl~~l~~G~~~-------l~~al~~A~a~Aa~~v~~~Ga~~~~~~~~e~~~~~~~ 407 (426)
T PLN02813 360 ILYGLLRGVSD-------LRGMGELAARVAATVVGQQGTRLRVEDAVELAESFAL 407 (426)
T ss_pred HHHHHHcCCCC-------HHHHHHHHHHHHHHHHcccCCCcCHHHHHHHHHHHHH
Confidence 999999999 8 9999999999999999999999999999999887764
No 10
>COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=351.00 Aligned_cols=301 Identities=41% Similarity=0.575 Sum_probs=262.1
Q ss_pred cEEEEccceeecccC-cCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 62 LVVCFGEMLIDFVPT-VSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 62 ~v~viG~~~vD~~~~-~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+|+++|++++|++.. .+..|.. ........+||++.|+|++++|||.++.++|. ||
T Consensus 1 ~v~~iG~~~vD~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~~a~lG~~~~~~~~-------------------vG 61 (311)
T COG0524 1 DVVVIGEANVDLIAQVVDRLPEPGETVLGDFFKVAGGGKGANVAVALARLGAKVALIGA-------------------VG 61 (311)
T ss_pred CEEEECchhhheehhhccCCCCCcccccccceeecCCchHHHHHHHHHHcCCceEEEEE-------------------ec
Confidence 489999999999996 4444433 22336788999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~ 216 (400)
+|.+|+++++.|++.||+++++....+.+|+.+++.++++|+|.+.+++.. +...+.+++++++.+..++++|++++.+
T Consensus 62 ~D~~g~~~~~~l~~~GVd~~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~l 140 (311)
T COG0524 62 DDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGA-AALLLTPEDLDEDELAGADVLHISGIQL 140 (311)
T ss_pred CcHHHHHHHHHHHHcCCccceEEEcCCCcceEEEEEEcCCCceeEEEECCc-ccccCChHHcChHHHhhcCeeeEEEeec
Confidence 999999999999999999999999888899999999999999999998665 6666888888777888999999998865
Q ss_pred cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
...+ +...++++.++++|+++++|++++...|. .+.+.++++++|++++|++|++.+++. ..+..+..+.++
T Consensus 141 ~~~~--~~~~~~~~~a~~~g~~v~~d~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~-~~~~~~~~~~~~ 212 (311)
T COG0524 141 EIPP--EALLAALELAKAAGVTVSFDLNPRPALWD-----RELLEELLALADILFPNEEEAELLTGL-EEDAEAAAALLL 212 (311)
T ss_pred CCCh--HHHHHHHHHHHHcCCeEEEecCCCccccc-----hhhHHHHHhhCCEEeCCHHHHHHHhCC-CccHHHHHHHHh
Confidence 4433 78889999999999999999999988775 566777899999999999999999997 222333335677
Q ss_pred hCCCcEEEEEecCCcEEEEeCCc---eEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYTKDF---SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~~~~---~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
..+++.+++|+|++|+++++++. ....+++++++||||||||+|.|||++++++|++ +++|+++|+++|+
T Consensus 213 ~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~-------~~~a~~~a~a~aa 285 (311)
T COG0524 213 AKGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKS-------LEEALRFANAAAA 285 (311)
T ss_pred hcCCCEEEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHhh
Confidence 88999999999999999999864 3333477789999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHhC
Q 015777 374 LTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 374 ~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++++..|+...+|+.++++.+++.
T Consensus 286 ~~~~~~g~~~~~p~~~~~~~~~~~ 309 (311)
T COG0524 286 LAVTRPGARPSLPTREEVEAFLEE 309 (311)
T ss_pred hhhccCCCCCCCCCHHHHHHHHhc
Confidence 999999999999999999998875
No 11
>cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.
Probab=100.00 E-value=1.1e-44 Score=347.93 Aligned_cols=294 Identities=56% Similarity=0.897 Sum_probs=248.7
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+|+|++++|++...+.. .......+||.+.|+|.++++||.++.+++. +|+|.+|
T Consensus 1 ~ilviG~~~~D~~~~~~~~----~~~~~~~~GG~~~n~a~~l~~lg~~v~~i~~-------------------vG~D~~g 57 (295)
T cd01167 1 KVVCFGEALIDFIPEGSGA----PETFTKAPGGAPANVAVALARLGGKAAFIGK-------------------VGDDEFG 57 (295)
T ss_pred CEEEEcceeEEEecCCCCC----CccccccCCCcHHHHHHHHHhcCCCeEEEEe-------------------ecCcHHH
Confidence 5899999999999876543 4566789999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchh
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPC 221 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~ 221 (400)
+++++.|+++||+++++.+.++.+|+++++.++++|+|++.+++..........+ +..+.+++++++|++++....+..
T Consensus 58 ~~i~~~l~~~gi~~~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~ 136 (295)
T cd01167 58 DFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTE-LNPDLLSEADILHFGSIALASEPS 136 (295)
T ss_pred HHHHHHHHHcCCCchheeecCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCcc-CChhHhccCCEEEEechhhccchH
Confidence 9999999999999999987788899999999988899999887543332222221 445678899999998875555555
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+...++++.+++.|+++++|++.+...|.......+.++++++++|++++|++|++.+++.... ++.++.+.+.|++
T Consensus 137 ~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~~~~--~~~~~~l~~~g~~ 214 (295)
T cd01167 137 RSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGEEDP--EEIAALLLLFGLK 214 (295)
T ss_pred HHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCCH--HHHHHHHhhcCCC
Confidence 66788899999999999999999877677655556677888999999999999999999987543 4566778889999
Q ss_pred EEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCC
Q 015777 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 381 (400)
Q Consensus 302 ~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~ 381 (400)
.++||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+...-++.++++|+++|+++|+++|++.|+
T Consensus 215 ~vvvt~G~~G~~~~~~~~~~~~~a~~~~vvDttGAGD~f~a~~~~~l~~g~~~~~~~~~~~~a~~~a~~~aa~~~~~~G~ 294 (295)
T cd01167 215 LVLVTRGADGALLYTKGGVGEVPGIPVEVVDTTGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFANAVGALTCTKAGA 294 (295)
T ss_pred EEEEecCCcceEEEECCcceeeCCCCcceeeCCCccHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHhhHHHhcccCC
Confidence 99999999999999998889999999999999999999999999999999800000112999999999999999999985
No 12
>cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.
Probab=100.00 E-value=7.2e-45 Score=352.54 Aligned_cols=288 Identities=28% Similarity=0.375 Sum_probs=247.3
Q ss_pred CcEEEEccceeecccCcCCCCccC----------C-----------CCceecCCChHHHHHHHHHHcCCCceeeeccccc
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAE----------S-----------PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLF 119 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~----------~-----------~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~ 119 (400)
.+|+++|++++|++..+++.|.+. . ......+||++.|+|++|+|||.++.++|.
T Consensus 2 ~~v~~vG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~---- 77 (312)
T cd01168 2 YDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQEELLAKLPVKYIAGGSAANTIRGAAALGGSAAFIGR---- 77 (312)
T ss_pred ceEEEECCCeEEEEEecCHHHHHHcCCCCCceeecCHHHHHHHHHhcCccccCCCHHHHHHHHHHHhcCCeEEEEE----
Confidence 369999999999999998877331 1 135788999999999999999999999999
Q ss_pred ccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc
Q 015777 120 CFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD 199 (400)
Q Consensus 120 ~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~ 199 (400)
+|+|.+|+++++.|+++||+++++... +.+|+.++++++++|+|+++.+ .++...++.+++.
T Consensus 78 ---------------vG~D~~g~~i~~~l~~~GV~~~~~~~~-~~~t~~~~~~~~~~g~r~~~~~--~~~~~~~~~~~~~ 139 (312)
T cd01168 78 ---------------VGDDKLGDFLLKDLRAAGVDTRYQVQP-DGPTGTCAVLVTPDAERTMCTY--LGAANELSPDDLD 139 (312)
T ss_pred ---------------eccChhHHHHHHHHHHCCCccccccCC-CCCceEEEEEEcCCCceeeecc--cchhhcCChhHCC
Confidence 999999999999999999999988764 5689999999999999988765 4566678888887
Q ss_pred hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 200 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 200 ~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
.+.+++++++|++++..... .+.+..+++.++++|+++++|++... .....++.+.++++++|++++|++|++.
T Consensus 140 ~~~l~~~~~v~~~~~~~~~~--~~~~~~~~~~a~~~g~~v~~d~~~~~----~~~~~~~~~~~~l~~~d~l~~n~~E~~~ 213 (312)
T cd01168 140 WSLLAKAKYLYLEGYLLTVP--PEAILLAAEHAKENGVKIALNLSAPF----IVQRFKEALLELLPYVDILFGNEEEAEA 213 (312)
T ss_pred HHHHccCCEEEEEEEecCCC--HHHHHHHHHHHHHcCCEEEEeCCcHH----HHHHHHHHHHHHHhhCCEEEeCHHHHHH
Confidence 77899999999988643222 36788899999999999999996311 1223445577888999999999999999
Q ss_pred ccCCCCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccc-ccccCCCCchHHHHHHHHHHHHcCCccccch
Q 015777 280 LTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKE 358 (400)
Q Consensus 280 l~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~ 358 (400)
|++.+..+..+.++.+++.+++.||||+|++|++++.+++.+++|+++ +++||||||||+|+|||++++++|++
T Consensus 214 l~~~~~~~~~~~a~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~l~~l~~g~~----- 288 (312)
T cd01168 214 LAEAETTDDLEAALKLLALRCRIVVITQGAKGAVVVEGGEVYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQGEP----- 288 (312)
T ss_pred HhCCCCCChHHHHHHHHhcCCCEEEEecCCCCeEEEECCEEEeCCCCCCCCcccCCchHHHHHHHHHHHHHcCCC-----
Confidence 998633334567788889999999999999999999988889999998 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 359 DQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 359 ~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
+++|+++|+++|+++|++.|+++
T Consensus 289 --~~~a~~~a~~~Aa~~v~~~G~~~ 311 (312)
T cd01168 289 --LEECIRLGSYAAAEVIQQLGPRL 311 (312)
T ss_pred --HHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999764
No 13
>PRK15074 inosine/guanosine kinase; Provisional
Probab=100.00 E-value=2.9e-44 Score=358.85 Aligned_cols=332 Identities=19% Similarity=0.210 Sum_probs=262.1
Q ss_pred CCCCCccc---CCCCCccccccccCCCCCCCCCccCCCCCcEEEEccceeecccCcCCCCcc------------C-----
Q 015777 25 STHPTIKA---SSPLPRLNVRVKALPGDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLA------------E----- 84 (400)
Q Consensus 25 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~viG~~~vD~~~~~~~~~~~------------~----- 84 (400)
++++..|+ .+.+.|.++-.+-.| .+..++.+|+++|+.++|+...++...+. +
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~g~GNaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~ 74 (434)
T PRK15074 2 KFPGQRKSKHYFPVNARDPLLQQIQP-------ENETSRTYIVGIDQTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAE 74 (434)
T ss_pred CCCcccccccccccCCCCcccccccc-------ccCCCCCcEEEeCCceeeEEEeeCHHHHHHcCCCCCceEecCHHHHH
Confidence 45565554 556778888777777 33356678999999999999887632210 0
Q ss_pred -------CCC--ceecCCChHHHHHHHHHHcC-CCceeeecccccccccceeeeccCCCcCCCC-hHHHHHHHHHH--HC
Q 015777 85 -------SPA--FKKAPGGAPANVAVGIARLG-GSSAFIGKTTLFCFYEHVKVIILPCPKVGAD-EFGYMLADILK--EN 151 (400)
Q Consensus 85 -------~~~--~~~~~GG~~~N~A~~larLG-~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D-~~g~~i~~~L~--~~ 151 (400)
... ....+||++.|+|+++++|| .++.++|. ||+| .+|+++++.|+ +.
T Consensus 75 ~l~~~l~~~~~~~~~~~GGsaaNtA~~lArLGG~~~~fig~-------------------VGdDd~~G~~~~~~L~~~~~ 135 (434)
T PRK15074 75 ALYQELKQNNLITHEFAGGTIGNTLHNYSVLADDRSVLLGV-------------------MSSNIEIGSYAYRYLCNTSS 135 (434)
T ss_pred HHHHHHhhccccccccCCCHHHHHHHHHHHcCCCCeEEEEE-------------------eCCCHHHHHHHHHHhhhhhC
Confidence 011 35569999999999999996 99999999 9999 79999999997 68
Q ss_pred CCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc---CchhHHHHHHH
Q 015777 152 NVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI---TEPCKSAHIAA 228 (400)
Q Consensus 152 gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~---~~~~~~~~~~~ 228 (400)
||+++++...+ .+|+.+++.++++|+|++..+ .+++..+++++++.+.+++++++|++++.+. .+...+.+.++
T Consensus 136 GVdt~~v~~~~-~~TG~~~VlV~~dGeRt~~t~--~GA~~~Lt~edld~~~i~~a~ilyl~Gy~l~~~~~~~~~~a~~~a 212 (434)
T PRK15074 136 RTDLNYLQGVD-GPIGRCFTLISEDGERTFAIS--PGHMNQLRPESIPEDVIAGASALVLTAYLVRCKPGEPMPEATMKA 212 (434)
T ss_pred CccCcceEEcC-CCCEEEEEEECCCCCEEEEEe--cChhhcCChhHCCHhHhccCCEEEEeeeehhcccCCCcHHHHHHH
Confidence 99999987654 489999999999999999988 4677788888888888999999999998654 22446788899
Q ss_pred HHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCcEEEEEec
Q 015777 229 AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEG 308 (400)
Q Consensus 229 ~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvT~G 308 (400)
++.|++.|+++++|++.+..++...+.+.+ .+++++|++++|++|++.|++..+ .+++++.+.+ +++.|+||+|
T Consensus 213 l~~Ake~G~~VslD~s~~~~v~~~~~~~~e---~l~~~vDILf~NeeEa~~LtG~~d--~eea~~~L~~-~~~~VVVTlG 286 (434)
T PRK15074 213 IEYAKKHNVPVVLTLGTKFVIEDNPQWWQE---FLKEHVSILAMNEDEAEALTGESD--PLLASDKALD-WVDLVLCTAG 286 (434)
T ss_pred HHHHHHcCCEEEEECcchhhccccHHHHHH---HHHhcCCEEEcCHHHHHHHhCCCC--HHHHHHHHHc-CCCEEEEEEC
Confidence 999999999999999976544433333322 345699999999999999998643 4456666654 5899999999
Q ss_pred CCcEEEEeCCc-------e--------------------------------EEEccc---cccccCCCCchHHHHHHHHH
Q 015777 309 PDGCRYYTKDF-------S--------------------------------GRVQGL---KVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 309 ~~G~~~~~~~~-------~--------------------------------~~vpa~---~v~vvDttGAGDaF~Agfl~ 346 (400)
++|++++..++ . .++|++ ++++||||||||+|+|||+|
T Consensus 287 ~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~ 366 (434)
T PRK15074 287 PIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNPLRVYSHIAPYMGGPEKIMNTNGAGDGALSALLH 366 (434)
T ss_pred CCCEEEEecccccccCceeeeccccccccccchhcccchhccccccccccccccCcccCCCCcceeCCCcHHHHHHHHHH
Confidence 99999975221 1 288888 78999999999999999999
Q ss_pred HHHcCC-c------------cccchHHHHHHHHHHHHHHHHHhcccCC--CCCCCCHHHH
Q 015777 347 QLSTDF-S------------LLQKEDQLRDALRFANACGALTVMERGA--IPALPTREAV 391 (400)
Q Consensus 347 ~l~~g~-~------------~~~~~~~l~~al~~A~a~Aa~~v~~~G~--~~~~p~~~~l 391 (400)
+|.+|+ + +.....++++|+++|+++|+..+++.|+ ..++|++++-
T Consensus 367 ~l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G~~~~~~~p~~~~~ 426 (434)
T PRK15074 367 DITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHSPRLSRGLPEREDS 426 (434)
T ss_pred HHHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccch
Confidence 999997 0 0001113999999999999999999998 5577877663
No 14
>cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.
Probab=100.00 E-value=6.3e-44 Score=342.38 Aligned_cols=291 Identities=39% Similarity=0.582 Sum_probs=247.5
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+|||++++|++...++.. .........+||++.|+|++|++||.++.++|. +|+|.+|
T Consensus 1 ~i~~iG~~~iD~~~~~~~~~-~~~~~~~~~~GG~~~N~a~~la~lg~~~~~i~~-------------------vG~D~~g 60 (294)
T cd01166 1 DVVTIGEVMVDLSPPGGGRL-EQADSFRKFFGGAEANVAVGLARLGHRVALVTA-------------------VGDDPFG 60 (294)
T ss_pred CeEEechhheeeecCCCCcc-chhhccccccCChHHHHHHHHHhcCCceEEEEe-------------------cCCCHHH
Confidence 58999999999998765433 345667889999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc-Cch
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI-TEP 220 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~-~~~ 220 (400)
+++++.|++.||+++++.+.++.+|+.+++.++++|+|++.+++...+...++.++++.+.+++++++|++++... .+.
T Consensus 61 ~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 140 (294)
T cd01166 61 RFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLDEAALAGADHLHLSGITLALSES 140 (294)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCCHHHHhCCCEEEEcCcchhhCHH
Confidence 9999999999999999988888899999999988899998888655555667777776677899999999886542 222
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC-cHHHHHHHHHhCC
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDDAVVYKLFHAN 299 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~-~~~~~~~~l~~~g 299 (400)
..+.+.++++.+++.++++++||+.+..+|. .+...+.+.++++++|++++|++|++.+++.... +..+.++.+ ++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~-~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~l-~~g 218 (294)
T cd01166 141 AREALLEALEAAKARGVTVSFDLNYRPKLWS-AEEAREALEELLPYVDIVLPSEEEAEALLGDEDPTDAAERALAL-ALG 218 (294)
T ss_pred HHHHHHHHHHHHHHcCCEEEECCCCcchhcC-hHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCCCchhHHHHHHhh-cCC
Confidence 2467788999999999999999987655443 3344566778899999999999999999987542 122333444 589
Q ss_pred CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 300 ~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
++.++||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+.+|++.
T Consensus 219 ~~~viit~G~~G~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~~~ 291 (294)
T cd01166 219 VKAVVVKLGAEGALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAGFLAGLLEGWD-------LEEALRFANAAAALVVTRP 291 (294)
T ss_pred ccEEEEEEcCCceEEEECCceEEeCCCCcccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcC
Confidence 999999999999999998888999999999999999999999999999999999 9999999999999999999
Q ss_pred CC
Q 015777 380 GA 381 (400)
Q Consensus 380 G~ 381 (400)
|+
T Consensus 292 G~ 293 (294)
T cd01166 292 GD 293 (294)
T ss_pred CC
Confidence 85
No 15
>cd01944 YegV_kinase_like YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=7.7e-44 Score=341.50 Aligned_cols=283 Identities=24% Similarity=0.341 Sum_probs=236.8
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+++|++++|++..+++.|.. +...+...+|| +.|+|++|++||.++.++|. +|+
T Consensus 1 ~i~~iG~~~~D~i~~~~~~~~~~~~~~~~~~~~~~GG-~~Nva~~l~~lG~~~~~~~~-------------------vG~ 60 (289)
T cd01944 1 KVLVIGAAVVDIVLDVDKLPASGGDIEAKSKSYVIGG-GFNVMVAASRLGIPTVNAGP-------------------LGN 60 (289)
T ss_pred CeEEEcceeEEEEeecccCCCCCCccccceeeeccCc-HHHHHHHHHHcCCCeEEEEE-------------------ecC
Confidence 4899999999999998876544 34567899999 99999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++... +..|+.++++++.+|+|+++++++ .+..++++.++...+.+++++|++++.+.
T Consensus 61 D~~g~~i~~~l~~~gi~~~~~~~~-~~~t~~~~~~~~~~g~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (289)
T cd01944 61 GNWADQIRQAMRDEGIEILLPPRG-GDDGGCLVALVEPDGERSFISISG--AEQDWSTEWFATLTVAPYDYVYLSGYTLA 137 (289)
T ss_pred ChHHHHHHHHHHHcCCcccccccc-CCCCeEEEEEEcCCCceEEEEeCC--ccCCCCHHHhccccCCCCCEEEEeCcccc
Confidence 999999999999999999998775 568888888888899999887743 44455656555445778999999987653
Q ss_pred Cch-hHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 218 TEP-CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 218 ~~~-~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
... ..+.+.++++.++ .++++++|++++...|. .+.+.++++++|++++|++|++.|++....+....++.+.
T Consensus 138 ~~~~~~~~~~~~~~~~~-~~~~v~~D~~~~~~~~~-----~~~~~~~l~~~d~~~~n~~E~~~l~g~~~~~~~~~~~~~~ 211 (289)
T cd01944 138 SENASKVILLEWLEALP-AGTTLVFDPGPRISDIP-----DTILQALMAKRPIWSCNREEAAIFAERGDPAAEASALRIY 211 (289)
T ss_pred CcchhHHHHHHHHHhcc-CCCEEEEcCcccccccC-----HHHHHHHHhcCCEEccCHHHHHHHhCCCCcchHHHHHHHH
Confidence 322 3556666666644 57999999998766543 2456678889999999999999999976554444466778
Q ss_pred hCCCcEEEEEecCCcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
+.+.+.|+||+|++|++++. +++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|+++
T Consensus 212 ~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~~~~g~~-------~~~a~~~a~a~aa~~ 284 (289)
T cd01944 212 AKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKVKAVDTIGAGDTHAGGMLAGLAKGMS-------LADAVLLANAAAAIV 284 (289)
T ss_pred hccCCeEEEEECCCcEEEEecCCCeEEecCCCCCCccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHhh
Confidence 88999999999999999998 4566788999999999999999999999999999999 999999999999999
Q ss_pred hcccC
Q 015777 376 VMERG 380 (400)
Q Consensus 376 v~~~G 380 (400)
+++.|
T Consensus 285 ~~~~G 289 (289)
T cd01944 285 VTRSG 289 (289)
T ss_pred hccCC
Confidence 99876
No 16
>cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.
Probab=100.00 E-value=9e-44 Score=341.16 Aligned_cols=283 Identities=34% Similarity=0.461 Sum_probs=244.2
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+|+|++++|++...++.|.. ....+...+||++.|+|++|++||.++.++|. +|+
T Consensus 1 ~il~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~-------------------vG~ 61 (292)
T cd01174 1 KVVVVGSINVDLVTRVDRLPKPGETVLGSSFETGPGGKGANQAVAAARLGARVAMIGA-------------------VGD 61 (292)
T ss_pred CEEEEeeceeEEEEEecCCCCCCCcEEeccceecCCCcHHHHHHHHHHcCCceEEEEE-------------------EcC
Confidence 4899999999999988876654 34556789999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEEcccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHYGSIS 215 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~~~~~ 215 (400)
|.+|+++++.|+++||++++++..++.+|+.+++.++.+|+|++++++ ++...++++.++. +.++.++++++.+.
T Consensus 62 D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 138 (292)
T cd01174 62 DAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVVP--GANGELTPADVDAALELIAAADVLLLQLE- 138 (292)
T ss_pred CccHHHHHHHHHHcCCCceEEEEcCCCCceeEEEEEcCCCceEEEEeC--CCCCCCCHHHHHHHHHhcccCCEEEEeCC-
Confidence 999999999999999999999888888999999999989999988873 4444555555543 56889999998642
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVV 292 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~ 292 (400)
.+.+.+..+++.++++|+++++|++.... ...++++++|++++|++|++.|++....+. .+.+
T Consensus 139 ----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 204 (292)
T cd01174 139 ----IPLETVLAALRAARRAGVTVILNPAPARP----------LPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAA 204 (292)
T ss_pred ----CCHHHHHHHHHHHHhcCCEEEEeCCCcCc----------CcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHH
Confidence 23467778899999999999999975432 124578899999999999999998765543 3456
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
+.+.+.|++.|++|+|++|++++++++.+++|+++++++|||||||+|.|||++++++|++ +++|+++|+++|
T Consensus 205 ~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vdt~GaGD~F~ag~l~~l~~g~~-------~~~al~~a~~~A 277 (292)
T cd01174 205 RLLLAKGVKNVIVTLGAKGALLASGGEVEHVPAFKVKAVDTTGAGDTFIGALAAALARGLS-------LEEAIRFANAAA 277 (292)
T ss_pred HHHHHcCCCEEEEEeCCCceEEEeCCceEEecCCCcccCCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 7888899999999999999999998888899999999999999999999999999999999 999999999999
Q ss_pred HHHhcccCCCCCCCC
Q 015777 373 ALTVMERGAIPALPT 387 (400)
Q Consensus 373 a~~v~~~G~~~~~p~ 387 (400)
+.++++.|+.+++|+
T Consensus 278 a~~~~~~G~~~~~~~ 292 (292)
T cd01174 278 ALSVTRPGAQPSIPT 292 (292)
T ss_pred HHHhcCcCCCCCCCC
Confidence 999999999988875
No 17
>PRK09850 pseudouridine kinase; Provisional
Probab=100.00 E-value=4e-43 Score=340.59 Aligned_cols=299 Identities=22% Similarity=0.244 Sum_probs=243.8
Q ss_pred CCCCCcEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
|++++.|+|+|++++|++...+..+.. ........+||++.|+|++++|||.++.++|.
T Consensus 1 ~~~~~~i~~iG~~~vD~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~ig~------------------ 62 (313)
T PRK09850 1 MREKDYVVIIGSANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSA------------------ 62 (313)
T ss_pred CCCCCcEEEECcEEEeeeccCCCcCcCCCCCceEEEEeCCcHHHHHHHHHHHcCCCeEEEEE------------------
Confidence 456678999999999999875443221 23456788999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEE
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHY 211 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~ 211 (400)
||+|.+|+++++.|++.||+++++...++.+|+.++++++++|++.+.+++ ++....+..+.+. .+.+++++++++
T Consensus 63 -vG~D~~g~~i~~~l~~~gVd~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 140 (313)
T PRK09850 63 -VGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAIND-MNISNAITAEYLAQHREFIQRAKVIVA 140 (313)
T ss_pred -ecCchhHHHHHHHHHHcCCCchheeecCCCCceEEEEEecCCCCEEEEecC-chHhhhCCHHHHHHHHHHHhcCCEEEE
Confidence 999999999999999999999998888888899999999999999887652 3444445544433 245788999988
Q ss_pred ccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---H
Q 015777 212 GSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---D 288 (400)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~---~ 288 (400)
++. .+.+....+++.+ .++++++|++.. |. ...+.++++++|++++|++|++.|++....+ .
T Consensus 141 ~~~-----~~~~~~~~~~~~~--~g~~v~~D~~~~---~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~ 205 (313)
T PRK09850 141 DCN-----ISEEALAWILDNA--ANVPVFVDPVSA---WK-----CVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDV 205 (313)
T ss_pred eCC-----CCHHHHHHHHHhc--cCCCEEEEcCCH---HH-----HHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHH
Confidence 642 2244555555543 589999999731 21 1335667889999999999999999864322 2
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcEEEEeCC-ceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHH
Q 015777 289 DAVVYKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367 (400)
Q Consensus 289 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~-~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~ 367 (400)
+++++++.+.|++.+|||+|++|++++.++ +..++|++++++||||||||+|+|||++++++|++ +++|+++
T Consensus 206 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfi~~l~~g~~-------~~eal~~ 278 (313)
T PRK09850 206 AKVAAWFHQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKTNVINVTGAGDAMMAGLASCWVDGMP-------FAESVRF 278 (313)
T ss_pred HHHHHHHHHcCCCEEEEEeCCceEEEEcCCCCeEecCCCCcccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHH
Confidence 355677778899999999999999998854 55678888999999999999999999999999999 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 368 ANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 368 A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
|+++|+++++..+.....|++++|++++++
T Consensus 279 a~a~aa~~~~~~~~~~~~~~~~~~~~~~~~ 308 (313)
T PRK09850 279 AQGCSSMALSCEYTNNPDLSIANVISLVEN 308 (313)
T ss_pred HHHHHHHHhcCCCCCCcccCHHHHHHHHHH
Confidence 999999999999999999999999998763
No 18
>cd01945 ribokinase_group_B Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .
Probab=100.00 E-value=7.1e-43 Score=333.77 Aligned_cols=279 Identities=27% Similarity=0.362 Sum_probs=237.2
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+++|++++|++..++..|.. +...+...+||++.|+|.+|++||.++.++|. +|+
T Consensus 1 ~i~~iG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~~~~-------------------vG~ 61 (284)
T cd01945 1 RVLGVGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGV-------------------VGD 61 (284)
T ss_pred CEEEECcceeEEEEEeccCCCCCCeEEEeEEEEecCCHHHHHHHHHHHcCCCeEEEEE-------------------ecC
Confidence 5899999999999998776654 34567889999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++...++.+|+.+++ .+.+|++++..+.. ....+..++++...+++++++|+++..
T Consensus 62 D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~i~~~~-- 136 (284)
T cd01945 62 DAIGRLILAELAAEGVDTSFIVVAPGARSPISSI-TDITGDRATISITA--IDTQAAPDSLPDAILGGADAVLVDGRQ-- 136 (284)
T ss_pred chHHHHHHHHHHHcCCCccceeecCCCCCccEEE-EccCCCceEEEecC--CCCCCCcccCCHHHhCcCCEEEEcCCC--
Confidence 9999999999999999999999888888988877 45577777666532 333456666766678999999998753
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
++...++++.++++|+++.+|.++... .+ +.++++++|++++|++|++.+++.... +..+.+.+
T Consensus 137 ----~~~~~~~~~~~~~~g~~v~~~~~~~~~--------~~-~~~~~~~~dil~~n~~e~~~l~~~~~~---~~~~~l~~ 200 (284)
T cd01945 137 ----PEAALHLAQEARARGIPIPLDLDGGGL--------RV-LEELLPLADHAICSENFLRPNTGSADD---EALELLAS 200 (284)
T ss_pred ----HHHHHHHHHHHHHcCCCeeEeccCCcc--------cc-hHHHhccCCEEEeChhHHhhhcCCCHH---HHHHHHHh
Confidence 346678899999999977777653211 12 566888999999999999999887432 56677788
Q ss_pred CCCcEEEEEecCCcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 015777 298 ANLKLLLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
.+++.|+||+|++|++++. +++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++
T Consensus 201 ~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvDt~GAGDaf~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~ 273 (284)
T cd01945 201 LGIPFVAVTLGEAGCLWLERDGELFHVPAFPVEVVDTTGAGDVFHGAFAHALAEGMP-------LREALRFASAAAALKC 273 (284)
T ss_pred cCCcEEEEEECCCCeEEEcCCCCEEecCCCccccccCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 9999999999999999998 6678899999999999999999999999999999999 9999999999999999
Q ss_pred cccCCCCCCCC
Q 015777 377 MERGAIPALPT 387 (400)
Q Consensus 377 ~~~G~~~~~p~ 387 (400)
++.|+..++|+
T Consensus 274 ~~~G~~~~~~~ 284 (284)
T cd01945 274 RGLGGRAGLPT 284 (284)
T ss_pred hccCCcccCCC
Confidence 99999888875
No 19
>PTZ00247 adenosine kinase; Provisional
Probab=100.00 E-value=1.3e-42 Score=341.48 Aligned_cols=289 Identities=21% Similarity=0.258 Sum_probs=237.0
Q ss_pred CCCcEEEEccceeecccCcCC------CCcc------------------CCCCceecCCChHHHHHHHHHHcC---C-Cc
Q 015777 59 ESPLVVCFGEMLIDFVPTVSG------LSLA------------------ESPAFKKAPGGAPANVAVGIARLG---G-SS 110 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~------~~~~------------------~~~~~~~~~GG~~~N~A~~larLG---~-~~ 110 (400)
..++|+|||++++|++..+++ .|.. ........+||++.|+|+++++|| . ++
T Consensus 4 ~~~~i~~iG~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~lg~~g~~~v 83 (345)
T PTZ00247 4 APKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALNTARVAQWMLQAPKGFV 83 (345)
T ss_pred CCceEEEECCceEEEEEeeCHHHHHHcCCCCCceeechHHHHHHHHHHHhccCceecCCCHHHHHHHHHHHHhcCCCCcE
Confidence 446899999999999998874 1221 112357889999999999999885 5 89
Q ss_pred eeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCcc
Q 015777 111 AFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSAD 190 (400)
Q Consensus 111 ~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~ 190 (400)
.++|. ||+|.+|+++++.|+++||+++++. .++.+|+++++.+++ |+|+++.+ .+++
T Consensus 84 ~~ig~-------------------vG~D~~G~~i~~~l~~~GVd~~~~~-~~~~~Tg~~~i~v~~-~~r~~~~~--~ga~ 140 (345)
T PTZ00247 84 CYVGC-------------------VGDDRFAEILKEAAEKDGVEMLFEY-TTKAPTGTCAVLVCG-KERSLVAN--LGAA 140 (345)
T ss_pred EEEEE-------------------eccchhHHHHHHHHHHcCCeeeccc-cCCCCcEEEEEEEcC-CCcccccC--cchh
Confidence 99999 9999999999999999999998876 567799999998874 79988775 4566
Q ss_pred ccCCccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc
Q 015777 191 MLLQEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET 266 (400)
Q Consensus 191 ~~l~~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~ 266 (400)
..+++++++. +.+++++++|++++.+. .+.+...++++.++++|+++++|++... + ....++.+.+++++
T Consensus 141 ~~l~~~~i~~~~~~~~l~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~~--~--~~~~~~~~~~~l~~ 214 (345)
T PTZ00247 141 NHLSAEHMQSHAVQEAIKTAQLYYLEGFFLT--VSPNNVLQVAKHARESGKLFCLNLSAPF--I--SQFFFERLLQVLPY 214 (345)
T ss_pred hcCChHHcCcHHHHHHHhhCCEEEEEEEEec--ccHHHHHHHHHHHHHcCCEEEEECCcHH--H--HHHHHHHHHHHHhh
Confidence 6777777764 36889999999986432 2357788899999999999999986311 1 12234557788999
Q ss_pred CcEEEcCHhHHhcccCCC---CCcHHHHHHHHHh------CCCcEEEEEecCCcEEEEeCCceEEEccccc---cccCCC
Q 015777 267 ADIIKISEEEISFLTQGE---DPYDDAVVYKLFH------ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDAT 334 (400)
Q Consensus 267 ~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~~------~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v---~vvDtt 334 (400)
+|++++|++|++.|+|.. ..+.++.++.+.+ .+.+.||||+|++|++++++++.+++|++++ ++||||
T Consensus 215 ~Dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTt 294 (345)
T PTZ00247 215 VDILFGNEEEAKTFAKAMKWDTEDLKEIAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTN 294 (345)
T ss_pred CCEEEeCHHHHHHHhhccCCCccCHHHHHHHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCC
Confidence 999999999999999831 1234455555543 2578999999999999999998888999887 599999
Q ss_pred CchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 335 GAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 335 GAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
||||+|+|||+++|++|++ +++|+++|+++|+++|++.|+..
T Consensus 295 GAGDaF~agfl~~l~~g~~-------~~~al~~a~~aAa~~v~~~Ga~~ 336 (345)
T PTZ00247 295 GAGDAFVGGFLAQYANGKD-------IDRCVEAGHYSAQVIIQHNGCTY 336 (345)
T ss_pred ChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999 99999999999999999999863
No 20
>PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases. The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B ....
Probab=100.00 E-value=4.4e-43 Score=337.32 Aligned_cols=290 Identities=39% Similarity=0.543 Sum_probs=245.7
Q ss_pred CcEEEEccceeecccCcCCC---CccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 61 PLVVCFGEMLIDFVPTVSGL---SLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~---~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.+|+|+|++++|++...+.. .. +.......+||++.|+|++|++||.++.+++. +|+
T Consensus 2 ~~v~~iG~~~iD~~~~~~~~~~~~~-~~~~~~~~~GG~~~n~a~~l~~LG~~v~~i~~-------------------vG~ 61 (301)
T PF00294_consen 2 KKVLVIGEVNIDIIGYVDRFKGDLV-RVSSVKRSPGGAGANVAIALARLGADVALIGK-------------------VGD 61 (301)
T ss_dssp EEEEEESEEEEEEEEESSSHTTSEE-EESEEEEEEESHHHHHHHHHHHTTSEEEEEEE-------------------EES
T ss_pred CcEEEECccceEEEeecCCcCCcce-ecceEEEecCcHHHHHHHHHHhccCcceEEee-------------------ccC
Confidence 57999999999999988763 22 56678899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+.+++.|+++||+++++.+.++.+|+++++.++++|+|++..+. +....++.+++.++.+.+++++|+++..+.
T Consensus 62 D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (301)
T PF00294_consen 62 DFFGEIILEELKERGVDTSYIPRDGDEPTGRCLIIVDPDGERTFVFSP--GANSDLTPDELDEEAIDEADILHLSGVSLP 139 (301)
T ss_dssp SHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEEETTSEEEEEEEE--GGGGGGGHHHHHHHHHHTESEEEEESGHCS
T ss_pred cchhhhhhhccccccccccccccccccccceeEeeecccccceeeecc--ccccccccccccccccccccceeecccccc
Confidence 999999999999999999999988888999999999999999998873 444456665556678889999999983333
Q ss_pred CchhHHHHHHHHHHHhhCC--CeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHH---
Q 015777 218 TEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV--- 292 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~--- 292 (400)
...+......+.+.+++.+ .+++.++. | ..+++.+.++++++|++++|++|+..+++....+.++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 211 (301)
T PF00294_consen 140 EGIPEDLLEALAKAAKKNGPFDPVFRDPS-----W---DDLREDLKELLPYADILKPNEEEAEALTGSKIDDPEDALAAL 211 (301)
T ss_dssp TTSHHHHHHHHHHHHHHTTEEEEEEEGGG-----S---HHHHHHHHHHHHTSSEEEEEHHHHHHHHTCSTSSHHHHHHHH
T ss_pred cccccceeeeccccccccccccccccccc-----c---cccchhhhhhccccchhccccccccccccccccchhhhhccc
Confidence 4444566677777777777 34555542 2 115678888889999999999999999999865555544
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEcc-ccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQG-LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa-~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+.++..+++.+++|+|++|++++++++.+++++ ++++++|+|||||+|+|||++++++|++ +++|+++|+++
T Consensus 212 ~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGD~f~A~~i~~l~~~~~-------~~~a~~~a~~~ 284 (301)
T PF00294_consen 212 RELQARGVKIVIVTLGEDGALYYTNDESYHVPPVPPVNVVDTTGAGDAFAAGFIYGLLSGMS-------LEEALKFANAA 284 (301)
T ss_dssp HHHHHTTSSEEEEEEGGGEEEEEETTEEEEEEEESSSSSSSCTTHHHHHHHHHHHHHHTTHH-------HHHHHHHHHHH
T ss_pred cccchhhhhhhhccccccCcccccccccccccccccccccceeccchhhhHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 455568999999999999999999999999998 5689999999999999999999999998 99999999999
Q ss_pred HHHHhcccCCCCCCCC
Q 015777 372 GALTVMERGAIPALPT 387 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~ 387 (400)
|++++++.|+..++||
T Consensus 285 aa~~v~~~g~~~~~p~ 300 (301)
T PF00294_consen 285 AALKVQQPGPRSPLPT 300 (301)
T ss_dssp HHHHHTSSSSSGGTT-
T ss_pred HHHHhCCCCCcCCCCC
Confidence 9999999999988887
No 21
>PLN02379 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=1.3e-41 Score=336.16 Aligned_cols=299 Identities=25% Similarity=0.297 Sum_probs=239.6
Q ss_pred CCcEEEEc-cceeecccCcCCCCcc------------------------C---------CCCceecCCChHHHHHHHHHH
Q 015777 60 SPLVVCFG-EMLIDFVPTVSGLSLA------------------------E---------SPAFKKAPGGAPANVAVGIAR 105 (400)
Q Consensus 60 ~~~v~viG-~~~vD~~~~~~~~~~~------------------------~---------~~~~~~~~GG~~~N~A~~lar 105 (400)
+++|++|| +.++|+...++...+. . .......+||++.|+++++++
T Consensus 19 ~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~ 98 (367)
T PLN02379 19 PPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTIRGLSA 98 (367)
T ss_pred CCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHHHHHHH
Confidence 35899999 9999999887522110 0 113667899999999999996
Q ss_pred -cCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEe
Q 015777 106 -LGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFY 184 (400)
Q Consensus 106 -LG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~ 184 (400)
||.++.++|+ ||+|.+|+++++.|++.||++++++.. +.+|+.++++++++|+|++..+
T Consensus 99 ~LG~~~~~ig~-------------------VG~D~~G~~~~~~L~~~GI~~~~~~~~-~~~Tg~~~v~v~~dgert~~~~ 158 (367)
T PLN02379 99 GFGVSTGIIGA-------------------CGDDEQGKLFVSNMGFSGVDLSRLRAK-KGPTAQCVCLVDALGNRTMRPC 158 (367)
T ss_pred hcCCCEEEEEE-------------------eCCChhHHHHHHHHHHcCCCccCcccC-CCCCceEEEEECCCCCccccCC
Confidence 9999999999 999999999999999999999888654 4589999999999999987654
Q ss_pred cCCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh
Q 015777 185 RNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW 264 (400)
Q Consensus 185 ~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll 264 (400)
.+....++.+++..+.+++++|+|++ +.. .+.+.+.++++.++++|+++++|++.... ...+++.+.+++
T Consensus 159 --lg~~~~l~~~~~~~~~~~~~~~v~v~-~~~---~~~~~~~~~~~~A~~~g~~v~lD~s~~~~----v~~~r~~l~~ll 228 (367)
T PLN02379 159 --LSSAVKLQADELTKEDFKGSKWLVLR-YGF---YNLEVIEAAIRLAKQEGLSVSLDLASFEM----VRNFRSPLLQLL 228 (367)
T ss_pred --ccccccCChhHCCHHHHhcCCEEEEE-ccc---CCHHHHHHHHHHHHHcCCEEEEeccchhh----hhhhhHHHHHHh
Confidence 34555677777777888999999998 433 23567889999999999999999964211 123345566666
Q ss_pred c--cCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccc-ccccCCCCchHHHH
Q 015777 265 E--TADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFV 341 (400)
Q Consensus 265 ~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~-v~vvDttGAGDaF~ 341 (400)
+ ++|++++|++|++.+++....+..+.+.+++..+++.++||+|++|++++.+++.+++|+++ +++||||||||+|+
T Consensus 229 ~~~~vDilf~Ne~Ea~~l~~~~~~~~~~~~~~~l~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~~~vVDTtGAGDaFa 308 (367)
T PLN02379 229 ESGKIDLCFANEDEARELLRGEQESDPEAALEFLAKYCNWAVVTLGSKGCIARHGKEVVRVPAIGETNAVDATGAGDLFA 308 (367)
T ss_pred hcCCccEEEcCHHHHHHHhcCCCCCCHHHHHHHHHhcCCEEEEEECCCCeEEEECCEEEEecCCCCCCcccCCChhHHHH
Confidence 4 89999999999999987532222233345566789999999999999999998889999987 47999999999999
Q ss_pred HHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 015777 342 AGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 342 Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
|||++++++|++ +++|+++|+++|+.+|++.|++......+++.+.+
T Consensus 309 agfl~gl~~G~~-------l~~a~~~g~~aAa~vi~~~G~~~~~~~~~~~~~~~ 355 (367)
T PLN02379 309 SGFLYGLIKGLS-------LEECCKVGACSGGSVVRALGGEVTPENWQWMYKQM 355 (367)
T ss_pred HHHHHHHHCCCC-------HHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHH
Confidence 999999999999 99999999999999999999874333333344443
No 22
>cd01942 ribokinase_group_A Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=5.1e-42 Score=326.90 Aligned_cols=270 Identities=29% Similarity=0.422 Sum_probs=229.3
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+|+|++++|++..+++.|.. ........+||.+.|+|++++|||.++.++|. +|+
T Consensus 1 ~v~~iG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~lg~~~~~~~~-------------------vG~ 61 (279)
T cd01942 1 DVAVVGHLNYDIILKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAA-------------------VGE 61 (279)
T ss_pred CEEEEecceeeeEeecccCCCCCceEecceeeecCCcHHHHHHHHHHHcCCCceEEEE-------------------ecC
Confidence 5899999999999988887754 35678899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++...++.+|+.+++.++.+|+|++..++ +....+..++ ....+++++++|+++..
T Consensus 62 D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~-- 136 (279)
T cd01942 62 DFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYP--GAMDELEPND-EADPDGLADIVHLSSGP-- 136 (279)
T ss_pred CcchHHHHHHHHHcCCCccceEEcCCCCcceEEEEEcCCCCEEEEecC--CcccccccCC-chhhhcccCEEEeCCch--
Confidence 999999999999999999999777777899999999888888877653 4444455544 44678899999998763
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHH---hcccCCCCCcHHHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEI---SFLTQGEDPYDDAVVYK 294 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~---~~l~~~~~~~~~~~~~~ 294 (400)
.+.++++.+++.|+++++|++++...|. .+.+.++++++|++++|++|+ ..+++.... .
T Consensus 137 ------~~~~~~~~~~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~---~---- 198 (279)
T cd01942 137 ------GLIELARELAAGGITVSFDPGQELPRLS-----GEELEEILERADILFVNDYEAELLKERTGLSEA---E---- 198 (279)
T ss_pred ------HHHHHHHHHHHcCCeEEEcchhhhhhcc-----HHHHHHHHhhCCEEecCHHHHHHHHhhcCCChH---H----
Confidence 3566777888889999999987654442 244667888999999999999 555554321 1
Q ss_pred HHhCCCcEEEEEecCCcEEEEeCCceEEEccc-cccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 295 l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~-~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
...+++.|++|+|++|++++.+++.+++|++ +++++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 199 -~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------l~~al~~a~~~Aa 270 (279)
T cd01942 199 -LASGVRVVVVTLGPKGAIVFEDGEEVEVPAVPAVKVVDTTGAGDAFRAGFLYGLLRGYD-------LEESLRLGNLAAS 270 (279)
T ss_pred -HhcCCCEEEEEECCCceEEEECCceEEccCcCcCCCcCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 1278999999999999999998888999987 889999999999999999999999999 9999999999999
Q ss_pred HHhcccCC
Q 015777 374 LTVMERGA 381 (400)
Q Consensus 374 ~~v~~~G~ 381 (400)
+++++.|+
T Consensus 271 ~~~~~~G~ 278 (279)
T cd01942 271 LKVERRGA 278 (279)
T ss_pred HHHcccCC
Confidence 99999995
No 23
>TIGR02152 D_ribokin_bact ribokinase. This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not.
Probab=100.00 E-value=6.7e-41 Score=321.67 Aligned_cols=284 Identities=33% Similarity=0.428 Sum_probs=242.4
Q ss_pred ccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHH
Q 015777 67 GEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGY 142 (400)
Q Consensus 67 G~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~ 142 (400)
|++++|++..+++.|.. +...+...+||++.|+|++|++||.++.+++. +|+|.+|+
T Consensus 1 G~~~~D~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~lg~~~~~~~~-------------------vG~D~~g~ 61 (293)
T TIGR02152 1 GSINMDLVLRTDRLPKPGETVHGHSFQIGPGGKGANQAVAAARLGAEVSMIGK-------------------VGDDAFGD 61 (293)
T ss_pred CCceEeEEEEeCCCCCCCCcEecCCceecCCCcHHHHHHHHHHCCCCEEEEEE-------------------ecCCccHH
Confidence 78999999999887654 35567899999999999999999999999999 99999999
Q ss_pred HHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEccccccCch
Q 015777 143 MLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISLITEP 220 (400)
Q Consensus 143 ~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~~~~~~~~~ 220 (400)
++++.|++.||++++++..++.+|++++++++++|+++++++. +.+..+.+++++ .+.+..++++++.+ +.
T Consensus 62 ~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 134 (293)
T TIGR02152 62 ELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVA--GANAELTPEDIDAAEALIAESDIVLLQL-----EI 134 (293)
T ss_pred HHHHHHHHcCCCeeEEEEcCCCCCceEEEEEcCCCCEEEEEEC--CcCCcCCHHHHHHHHhhhccCCEEEEec-----CC
Confidence 9999999999999999888778999999999988999888763 444556666665 35678899988753 23
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC---cHHHHHHHHHh
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP---YDDAVVYKLFH 297 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~---~~~~~~~~l~~ 297 (400)
+.+.+.++++.++++++++++|++.... ....++++++|++++|++|++.+++.... +..+.++.+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~v~~D~~~~~~---------~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~ 205 (293)
T TIGR02152 135 PLETVLEAAKIAKKHGVKVILNPAPAIK---------DLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLE 205 (293)
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCcCcc---------cchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHHHH
Confidence 3567788899999999999999974321 11245788999999999999999987532 23456677888
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|++.++||+|++|+.+++++..+++|+++++++||+||||+|+|||++++++|++ +++|+++|+++|+.+++
T Consensus 206 ~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~~vdt~GAGDaf~Ag~l~~l~~g~~-------~~~al~~a~~~Aa~~~~ 278 (293)
T TIGR02152 206 KGVKNVIITLGSKGALLVSKDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKS-------LEDAIRFANAAAAISVT 278 (293)
T ss_pred cCCCeEEEEeCCCceEEEeCCceeEccCCCCceeCCCCcHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHc
Confidence 89999999999999999998888899999999999999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCHHHHH
Q 015777 378 ERGAIPALPTREAVL 392 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~ 392 (400)
+.|+...+|++++++
T Consensus 279 ~~G~~~~~~~~~~~~ 293 (293)
T TIGR02152 279 RKGAQSSIPYLEEVE 293 (293)
T ss_pred ccCcccCCCChHHcC
Confidence 999988889888763
No 24
>PRK09954 putative kinase; Provisional
Probab=100.00 E-value=1.1e-40 Score=329.94 Aligned_cols=323 Identities=19% Similarity=0.189 Sum_probs=244.7
Q ss_pred CcccCCCCCccccccccCC-CCCCCCCccCCCCCcEEEEccceeecccCcC-CCCcc--CCCCceecCCChHHHHHHHHH
Q 015777 29 TIKASSPLPRLNVRVKALP-GDGLSETKETRESPLVVCFGEMLIDFVPTVS-GLSLA--ESPAFKKAPGGAPANVAVGIA 104 (400)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~viG~~~vD~~~~~~-~~~~~--~~~~~~~~~GG~~~N~A~~la 104 (400)
.++++.......|+.++.. +.++.. .+...|+|+|++++|++..++ ..|.. ....+...+||++.|+|++++
T Consensus 29 ~s~~~v~~~i~~L~~~g~i~~~~~~l----~~~~~v~viG~~~vD~~~~~~~~~p~~~~~~~~~~~~~GG~~~NvA~~la 104 (362)
T PRK09954 29 ISRSRVAAHIMDLMRKGRIKGKGYIL----TEQEYCVVVGAINMDIRGMADIRYPQAASHPGTIHCSAGGVGRNIAHNLA 104 (362)
T ss_pred CCHHHHHHHHHHHHHCCCcCCcEEEE----cCCccEEEEEEEEEEEEEeeCCcCcCCCCCCceEEEecCcHHHHHHHHHH
Confidence 3333444444555554544 222222 233489999999999998776 44433 345678889999999999999
Q ss_pred HcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEe
Q 015777 105 RLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFY 184 (400)
Q Consensus 105 rLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~ 184 (400)
|||.++.++|. ||+|.+|+++++.|++.||+++++...++.+|+.++++.+.++++.+. .
T Consensus 105 rLG~~v~~ig~-------------------VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~~~~~~~~-~ 164 (362)
T PRK09954 105 LLGRDVHLLSA-------------------IGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANRQDETVLA-I 164 (362)
T ss_pred HcCCCeEEEEE-------------------ECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcCCCCEEEE-E
Confidence 99999999999 999999999999999999999999888888899988887766555444 3
Q ss_pred cCCCccccCCccccch--hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHh
Q 015777 185 RNPSADMLLQEAELDL--SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS 262 (400)
Q Consensus 185 ~~~~~~~~l~~~~l~~--~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ 262 (400)
.++.....++++.++. +.+..+++++++.. .+.+....+++.+ +++++++|+... ...+.+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~~~a--~~~~v~~D~~~~--------~~~~~~~~ 229 (362)
T PRK09954 165 NDTHILQQLTPQLLNGSRDLIRHAGVVLADCN-----LTAEALEWVFTLA--DEIPVFVDTVSE--------FKAGKIKH 229 (362)
T ss_pred cCchhhhcCCHHHHHHHHHHHhcCCEEEEECC-----CCHHHHHHHHHhC--CCCcEEEECCCH--------HHhhhhhh
Confidence 3333444555554442 45678888887642 2234555555554 479999998631 11133567
Q ss_pred hhccCcEEEcCHhHHhcccCCCCCc---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCC-ceEEEccccccccCCCCchH
Q 015777 263 IWETADIIKISEEEISFLTQGEDPY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGD 338 (400)
Q Consensus 263 ll~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~-~~~~vpa~~v~vvDttGAGD 338 (400)
+++++|++++|++|++.++|....+ .+++++.+++.|++.||||+|++|++++..+ +.+++|++++++||||||||
T Consensus 230 ~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGD 309 (362)
T PRK09954 230 WLAHIHTLKPTQPELEILWGQAITSDADRNAAVNALHQQGVQQIFVYLPDESVFCSEKDGEQFLLTAPAHTTVDSFGADD 309 (362)
T ss_pred hhccccEEecCHHHHHHHcCCCCCCHHHHHHHHHHHHHcCCCEEEEEeCCccEEEEeCCCceEeccCCCcccccccchHH
Confidence 8899999999999999999875432 2356678888999999999999999988755 46678999999999999999
Q ss_pred HHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 339 AFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 339 aF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+|+|||++++++|++ +++|+++|+++|++++.+..+...-.+.+.+++.++.
T Consensus 310 aF~Ag~l~~l~~g~~-------~~eal~~a~a~Aal~~~s~~~~~~~~~~~~~~~~~~~ 361 (362)
T PRK09954 310 GFMAGLVYSFLEGYS-------FRDSARFAMACAAISRASGSLNNPTLSADNALSLVPM 361 (362)
T ss_pred HHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHhcc
Confidence 999999999999999 9999999999999997755444334688888888753
No 25
>cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=7.3e-41 Score=316.92 Aligned_cols=260 Identities=23% Similarity=0.341 Sum_probs=220.5
Q ss_pred cEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+|+|++++|++..+++.|.+. ...+...+||++.|+|++|+|||.++.++|. +|+
T Consensus 1 ~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~i~~-------------------vG~ 61 (265)
T cd01947 1 KIAVVGHVEWDIFLSLDAPPQPGGISHSSDSRESPGGGGANVAVQLAKLGNDVRFFSN-------------------LGR 61 (265)
T ss_pred CEEEEeeeeEEEEEEecCCCCCCceeecccceeecCchHHHHHHHHHHcCCceEEEEE-------------------ecC
Confidence 58999999999999988766543 5678899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++ ++++.+++.. +..|+.++++++++|+|++.+..... .++++.+.+++++++|+++..
T Consensus 62 D~~g~~i~~~l~~-~~~~~~~~~~-~~~t~~~~~~~~~~g~r~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-- 131 (265)
T cd01947 62 DEIGIQSLEELES-GGDKHTVAWR-DKPTRKTLSFIDPNGERTITVPGERL------EDDLKWPILDEGDGVFITAAA-- 131 (265)
T ss_pred ChHHHHHHHHHHh-cCCcceEEec-CCCCceEEEEECCCCcceEEecCCCC------cccCCHhHhccCCEEEEeccc--
Confidence 9999999999999 9998887764 45899999999999999887753221 234445677899999998753
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
...++++.+++.+ .+++|++.+... +.+.++++++|++++|++|+..+++ .+.+.+
T Consensus 132 ------~~~~~~~~a~~~~-~~~~d~~~~~~~--------~~~~~~~~~~d~~~~n~~e~~~l~~---------~~~~~~ 187 (265)
T cd01947 132 ------VDKEAIRKCRETK-LVILQVTPRVRV--------DELNQALIPLDILIGSRLDPGELVV---------AEKIAG 187 (265)
T ss_pred ------ccHHHHHHHHHhC-CeEeccCccccc--------hhHHHHhhhCCEEEeCHHHHHHhhh---------HHHHHh
Confidence 1235566777765 577898765431 2456788899999999999988764 346677
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.+++.++||+|++|++++++++.+++|+++++++|||||||+|.|||++++++|++ +++|+++|+++|+++++
T Consensus 188 ~~~~~viit~G~~Ga~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~al~~a~~~Aa~~v~ 260 (265)
T cd01947 188 PFPRYLIVTEGELGAILYPGGRYNHVPAKKAKVPDSTGAGDSFAAGFIYGLLKGWS-------IEEALELGAQCGAICVS 260 (265)
T ss_pred ccCCEEEEEeCCCCeEEEECCeeEECCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHh
Confidence 89999999999999999998888899999999999999999999999999999999 99999999999999999
Q ss_pred ccCC
Q 015777 378 ERGA 381 (400)
Q Consensus 378 ~~G~ 381 (400)
+.|+
T Consensus 261 ~~G~ 264 (265)
T cd01947 261 HFGP 264 (265)
T ss_pred ccCC
Confidence 9995
No 26
>cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.
Probab=100.00 E-value=3.5e-40 Score=311.96 Aligned_cols=263 Identities=30% Similarity=0.364 Sum_probs=217.7
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+++|++++|++... ....+||++.|+|.+|++||.++.+++. +|+|.+|
T Consensus 1 ~v~~iG~~~~D~~~~~----------~~~~~GG~~~Nva~~la~lG~~~~~~~~-------------------vG~D~~g 51 (264)
T cd01940 1 RLAAIGDNVVDKYLHL----------GKMYPGGNALNVAVYAKRLGHESAYIGA-------------------VGNDDAG 51 (264)
T ss_pred CeEEEcceEEEEeccC----------ceecCCCcHHHHHHHHHHcCCCeeEEec-------------------ccCchhH
Confidence 5899999999999752 3578999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchh
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPC 221 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~ 221 (400)
+++++.|++.||++++++..++ +|+.+++. .++|+|++.+++. +......+.+...+.+++++++|++++..
T Consensus 52 ~~i~~~l~~~gI~~~~v~~~~~-~t~~~~~~-~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----- 123 (264)
T cd01940 52 AHVRSTLKRLGVDISHCRVKEG-ENAVADVE-LVDGDRIFGLSNK-GGVAREHPFEADLEYLSQFDLVHTGIYSH----- 123 (264)
T ss_pred HHHHHHHHHcCCChhheEEcCC-CCceEEEE-ecCCceEEEeecC-CcHHhcccCcccHhHHhcCCEEEEccccc-----
Confidence 9999999999999999987654 78887755 4678888877642 22222222223335678999999987642
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+...++++.++++|+++++|++.+ |. .+.+.++++++|++++|++|... .+..+.++.+++.+++
T Consensus 124 ~~~~~~~~~~a~~~g~~v~~D~~~~---~~-----~~~~~~~~~~~d~~~~~~~~~~~------~~~~~~~~~l~~~~~~ 189 (264)
T cd01940 124 EGHLEKALQALVGAGALISFDFSDR---WD-----DDYLQLVCPYVDFAFFSASDLSD------EEVKAKLKEAVSRGAK 189 (264)
T ss_pred HHHHHHHHHHHHHcCCEEEEcCccc---CC-----HHHHHhhcccCCEEEechhhcCc------chHHHHHHHHHHcCCC
Confidence 3567788999999999999999864 21 12355678899999999887631 2234566778889999
Q ss_pred EEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCC
Q 015777 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGA 381 (400)
Q Consensus 302 ~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~ 381 (400)
.+|||+|++|++++.+++.+++|+++++++|||||||+|.|||++++++|++ ++++|+++|+++|++++++.|+
T Consensus 190 ~vvvT~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~------~~~~al~~a~~~aa~~~~~~G~ 263 (264)
T cd01940 190 LVIVTRGEDGAIAYDGAVFYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAGGT------AIAEAMRQGAQFAAKTCGHEGA 263 (264)
T ss_pred EEEEEECCCCeEEEeCCeEEecCCcCCCCCCCCCchHHHHHHHHHHHHhCCc------hHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999998888899999999999999999999999999999974 2899999999999999999995
No 27
>cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose. KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism.
Probab=100.00 E-value=3.5e-40 Score=316.52 Aligned_cols=273 Identities=18% Similarity=0.211 Sum_probs=220.1
Q ss_pred cEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.|+|+|++++|++..+++.|... .......+||++.|+|.+|+|||.++.++|. +|+
T Consensus 1 ~v~~iG~~~vD~~~~v~~~p~~~~~~~~~~~~~~~GG~a~NvA~~la~lG~~~~~~~~-------------------vG~ 61 (290)
T cd01939 1 AVLCVGLTVLDFITTVDKYPFEDSDQRTTNGRWQRGGNASNSCTVLRLLGLSCEFLGV-------------------LSR 61 (290)
T ss_pred CEEEEeeeeeEEEeeecCCCCCCcceEeeeeeEecCCCHHHHHHHHHHcCCceEEEEe-------------------ecC
Confidence 38999999999999999877653 3445778999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++...++..+..++++.+++|+|+++++.. ....++.++++...+++++++|++++..
T Consensus 62 D~~g~~~~~~l~~~gId~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 138 (290)
T cd01939 62 GPVFESLLDDFQSRGIDISHCYRKDIDEPASSYIIRSRAGGRTTIVNDN--NLPEVTYDDFSKIDLTQYGWIHFEGRNP- 138 (290)
T ss_pred CHHHHHHHHHHHHcCCceeeeeEcCCCCCeeEEEEEcCCCCeEEEEeCC--CCCCCCHHHHhhhhhccCCEEEEeccCH-
Confidence 9999999999999999999986666556666777777788998887643 3445677776655668999999987642
Q ss_pred CchhHHHHHHHHHHHhhCC-------CeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAG-------VVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDA 290 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g-------~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~ 290 (400)
+...++++.+++.+ +++++|++.+. +.+.++++++|++++|++|++.+ +... .++
T Consensus 139 -----~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~----------~~~~~~l~~~di~~~n~~~~~~~-~~~~--~~~ 200 (290)
T cd01939 139 -----DETLRMMQHIEEHNNRRPEIRITISVEVEKPR----------EELLELAAYCDVVFVSKDWAQSR-GYKS--PEE 200 (290)
T ss_pred -----HHHHHHHHHHHHhcCcCCCcceEEEEEeccCc----------hhhhhHHhhCCEEEEEhHHHHhc-CcCC--HHH
Confidence 23456666677665 68889986421 22346888999999999998765 5433 233
Q ss_pred HHHHH--HhCCCcEEEEEecCCcEEEEeC-CceEEEccccc-cccCCCCchHHHHHHHHHHHHcCC-ccccchHHHHHHH
Q 015777 291 VVYKL--FHANLKLLLVTEGPDGCRYYTK-DFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDF-SLLQKEDQLRDAL 365 (400)
Q Consensus 291 ~~~~l--~~~g~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~-~~~~~~~~l~~al 365 (400)
.++.+ ...+++.||||+|++|++++.+ ++.+++|++++ ++||||||||+|.|||++++++|+ + +++|+
T Consensus 201 ~~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvDt~GAGDsf~agfl~~l~~g~~~-------~~~a~ 273 (290)
T cd01939 201 CLRGEGPRAKKAALLVCTWGDQGAGALGPDGEYVHSPAHKPIRVVDTLGAGDTFNAAVIYALNKGPDD-------LSEAL 273 (290)
T ss_pred HHHhhhhhccCCcEEEEEcccCCeEEEcCCCCEEEecCCCCCCcccCCCchHHHHHHHHHHHHcCCcc-------HHHHH
Confidence 33332 2457899999999999999886 45778998875 699999999999999999999999 7 99999
Q ss_pred HHHHHHHHHHhcccCC
Q 015777 366 RFANACGALTVMERGA 381 (400)
Q Consensus 366 ~~A~a~Aa~~v~~~G~ 381 (400)
++|+++|++++++.|.
T Consensus 274 ~~a~a~aa~~i~~~G~ 289 (290)
T cd01939 274 DFGNRVASQKCTGVGF 289 (290)
T ss_pred HHHHHHHHHHHhhhcC
Confidence 9999999999999884
No 28
>TIGR03828 pfkB 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).
Probab=100.00 E-value=1.4e-39 Score=313.89 Aligned_cols=287 Identities=23% Similarity=0.263 Sum_probs=233.7
Q ss_pred EEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 65 CFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 65 viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
|.=++++|++..++++|.. ........+||++.|+|++|++||.++.++|. ||+| +|
T Consensus 4 ~~~~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~v~~is~-------------------vG~D-~g 63 (304)
T TIGR03828 4 VTLNPAIDLTIELDGLTLGEVNRVESTRIDAGGKGINVSRVLKNLGVDVVALGF-------------------LGGF-TG 63 (304)
T ss_pred EEcchHHeEEEEccccccCceeecccccccCCccHHHHHHHHHHcCCCeEEEEE-------------------ecCc-hh
Confidence 3446789999999987721 35567899999999999999999999999999 9999 69
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEEEcccc
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSIS 215 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~~~~~~ 215 (400)
+.+++.|++.||++++++..+ .|+.++++++.+|+++++.+.+ . .++.++++. +.+++++++|++++.
T Consensus 64 ~~~~~~L~~~gId~~~~~~~~--~t~~~~~~~~~~g~~~~~~~~~--~--~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~ 137 (304)
T TIGR03828 64 DFIEALLREEGIKTDFVRVPG--ETRINVKIKEPSGTETKLNGPG--P--EISEEELEALLEKLRAQLAEGDWLVLSGSL 137 (304)
T ss_pred HHHHHHHHHCCCcceEEECCC--CCeeeEEEEeCCCCEEEEECCC--C--CCCHHHHHHHHHHHHHhccCCCEEEEECCC
Confidence 999999999999999887753 4667777777888887765432 2 234333321 357899999998764
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVV 292 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~ 292 (400)
.. ..+.+.+.++++.+++.++++++|++.. ...+. +...+|++++|++|++.+++....+. .+.+
T Consensus 138 ~~-~~~~~~~~~~~~~~~~~~~~v~~D~~~~--------~~~~~---~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~ 205 (304)
T TIGR03828 138 PP-GVPPDFYAELIALAREKGAKVILDTSGE--------ALRDG---LKAKPFLIKPNDEELEELFGRELKTLEEIIEAA 205 (304)
T ss_pred CC-CCCHHHHHHHHHHHHHcCCEEEEECChH--------HHHHH---HhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHH
Confidence 32 2234677888999999999999998631 11221 23358999999999999998754332 2445
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
+.+++.|.+.||||+|++|++++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|
T Consensus 206 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaF~a~~l~~l~~g~~-------~~~a~~~a~~~A 278 (304)
T TIGR03828 206 RELLDLGAENVLISLGADGALLVTKEGALFAQPPKGEVVSTVGAGDSMVAGFLAGLESGLS-------LEEALRLAVAAG 278 (304)
T ss_pred HHHHHcCCCEEEEccCCCCcEEEcCCceEEEeCCCccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHH
Confidence 6777889999999999999999998888889998899999999999999999999999999 999999999999
Q ss_pred HHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 373 ALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 373 a~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|++.|+ .+|+++++++++.+|
T Consensus 279 a~~~~~~G~--~~p~~~~~~~~~~~~ 302 (304)
T TIGR03828 279 SAAAFSEGT--GLPDPEDIEELLPQV 302 (304)
T ss_pred HHHhcCcCC--CCCCHHHHHHHHhcc
Confidence 999999997 479999999998875
No 29
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=100.00 E-value=6.3e-40 Score=318.18 Aligned_cols=292 Identities=24% Similarity=0.262 Sum_probs=229.3
Q ss_pred CCCcEEEEccceeecccC--cCCCCc------cCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeecc
Q 015777 59 ESPLVVCFGEMLIDFVPT--VSGLSL------AESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL 130 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~--~~~~~~------~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~ 130 (400)
+.++|+++|++++|.+.. +++.+. .........+|| +.|+|.+|++||.++.++|.
T Consensus 6 ~~~~il~iG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~l~~lg~~v~~i~~--------------- 69 (315)
T TIGR02198 6 KGAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEREEDRLGG-AANVARNIASLGARVFLVGV--------------- 69 (315)
T ss_pred CCCcEEEECceeEeeeeeecccccCCCCCCceEEEEEEEecCcH-HHHHHHHHHhcCCceEEEEE---------------
Confidence 356899999999999876 333311 122345677999 79999999999999999999
Q ss_pred CCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCc----cccc--hhhcC
Q 015777 131 PCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQE----AELD--LSLIT 204 (400)
Q Consensus 131 ~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~----~~l~--~~~i~ 204 (400)
||+|.+|+++++.|+++||+++++...++.+|+.++++++.++. .+.+. ......++. +.++ .+.++
T Consensus 70 ----vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 142 (315)
T TIGR02198 70 ----VGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTTTKTRVLARNQQ-LLRVD--FEERDPINAELEARLLAAIREQLA 142 (315)
T ss_pred ----EecchhHHHHHHHHHHCCCCcceEEECCCCCcceEEEEEcCCeE-EEEec--CCCCCCCCHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999988888889999888876432 22222 111111221 1111 24578
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 284 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~ 284 (400)
++|+++++++.. ...+.+....+++.++++|+++++||+.+. ...++++|++++|++|++.+++..
T Consensus 143 ~~~~v~~~~~~~-~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~-------------~~~~~~~d~l~~n~~E~~~l~~~~ 208 (315)
T TIGR02198 143 SADAVVLSDYAK-GVLTPRVVQEVIAAARKHGKPVLVDPKGKD-------------FSRYRGATLITPNRKEAEAAVGAC 208 (315)
T ss_pred hCCEEEEecCCC-CccCHHHHHHHHHHHHhcCCCEEEeCCCcc-------------hhhcCCCcEECCCHHHHHHHhCCC
Confidence 999999977532 223456788899999999999999997431 124678999999999999999842
Q ss_pred CC--cHHHHHHHHH-hCCCcEEEEEecCCcEEEEeC-CceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHH
Q 015777 285 DP--YDDAVVYKLF-HANLKLLLVTEGPDGCRYYTK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQ 360 (400)
Q Consensus 285 ~~--~~~~~~~~l~-~~g~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~ 360 (400)
.. +..+.++.++ +.|++.|+||+|++|++++.+ +..+++|+++++++|||||||+|.|||++++++|++
T Consensus 209 ~~~~~~~~~~~~l~~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~ag~~~~l~~g~~------- 281 (315)
T TIGR02198 209 DTEAELVQAAEKLLEELDLEALLVTRSEKGMTLFTREGEPIHIPAQAREVYDVTGAGDTVIATLALALAAGAS------- 281 (315)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEEcCCCCeEEEecCCCeEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------
Confidence 21 1233444554 468999999999999999884 567889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 361 LRDALRFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 361 l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
+++|+++|+++|+++|++.|+.. ++++++++.|+
T Consensus 282 ~~~al~~A~~~aa~~~~~~G~~~--~~~~~~~~~~~ 315 (315)
T TIGR02198 282 LEEACRLANAAAGVVVGKLGTAT--VSPAELANALQ 315 (315)
T ss_pred HHHHHHHHHHHhhhhhccCCCCC--CCHHHHHHHhC
Confidence 99999999999999999999865 79999988764
No 30
>cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.
Probab=100.00 E-value=1.1e-39 Score=314.76 Aligned_cols=279 Identities=25% Similarity=0.293 Sum_probs=221.0
Q ss_pred cEEEEccceeecccCc--CCCCcc------CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 62 LVVCFGEMLIDFVPTV--SGLSLA------ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~--~~~~~~------~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
+|+++|+.++|++... ++.+.. ........+|| +.|+|.+|+|||.++.++|.
T Consensus 1 ~vl~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvA~~la~LG~~~~~i~~------------------ 61 (304)
T cd01172 1 KVLVVGDVILDEYLYGDVERISPEAPVPVVKVEREEIRLGG-AANVANNLASLGAKVTLLGV------------------ 61 (304)
T ss_pred CEEEEcceeEEeeEeeccccccCCCCcceEEeeeEEecCcH-HHHHHHHHHHhCCCeEEEEE------------------
Confidence 5899999999998764 333221 22345678999 58999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCcc------ccchhhcCCcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEA------ELDLSLITKAK 207 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~------~l~~~~i~~~~ 207 (400)
+|+|.+|+++++.|+++||+++++ ..++.+|+.+++++++ +++.+.++.... ..+..+ +...+.++++|
T Consensus 62 -vG~D~~g~~i~~~l~~~gI~~~~~-~~~~~~t~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~ 136 (304)
T cd01172 62 -VGDDEAGDLLRKLLEKEGIDTDGI-VDEGRPTTTKTRVIAR-NQQLLRVDREDD--SPLSAEEEQRLIERIAERLPEAD 136 (304)
T ss_pred -EcCCccHHHHHHHHHhCCCCcceE-ecCCCCceEEEEEecC-CcEEEEEecCCC--CCCCHHHHHHHHHHHHHhhccCC
Confidence 999999999999999999999985 4566679888888765 455555442221 222222 11124678999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc
Q 015777 208 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY 287 (400)
Q Consensus 208 ~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~ 287 (400)
++|++++.. ...+.+...++++.+++.|+++++|++.+.. ..++++|++++|++|++.+++....+
T Consensus 137 ~v~~s~~~~-~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~-------------~~~~~~d~l~~n~~E~~~l~~~~~~~ 202 (304)
T cd01172 137 VVILSDYGK-GVLTPRVIEALIAAARELGIPVLVDPKGRDY-------------SKYRGATLLTPNEKEAREALGDEIND 202 (304)
T ss_pred EEEEEcCCC-CccCHHHHHHHHHHHHhcCCCEEEeCCCcch-------------hhccCCcEeCCCHHHHHHHhCCCCCC
Confidence 999876432 2233467788899999999999999975320 35678999999999999999875332
Q ss_pred ---HHHHHHHHH-hCCCcEEEEEecCCcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHH
Q 015777 288 ---DDAVVYKLF-HANLKLLLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362 (400)
Q Consensus 288 ---~~~~~~~l~-~~g~~~vvvT~G~~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~ 362 (400)
.++.++.++ ..|++.|+||+|++|+++++ +++.+++|++++++||||||||+|+|||+++|++|++ ++
T Consensus 203 ~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~ag~i~~l~~g~~-------~~ 275 (304)
T cd01172 203 DDELEAAGEKLLELLNLEALLVTLGEEGMTLFERDGEVQHIPALAKEVYDVTGAGDTVIATLALALAAGAD-------LE 275 (304)
T ss_pred hHHHHHHHHHHHHHhCCCeEEEEcCCCccEEEcCCCcEEEecCCCCCCCCCcCccHHHHHHHHHHHHcCCC-------HH
Confidence 234455555 46899999999999999998 7778999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHhcccCCCCCC
Q 015777 363 DALRFANACGALTVMERGAIPAL 385 (400)
Q Consensus 363 ~al~~A~a~Aa~~v~~~G~~~~~ 385 (400)
+|+++|+++|+++|++.|+.+.+
T Consensus 276 ~al~~a~a~Aa~~~~~~g~~~~~ 298 (304)
T cd01172 276 EAAFLANAAAGVVVGKVGTAPVT 298 (304)
T ss_pred HHHHHHHHHhheeeecCCCCCcC
Confidence 99999999999999999987643
No 31
>PRK09813 fructoselysine 6-kinase; Provisional
Probab=100.00 E-value=4.3e-39 Score=304.21 Aligned_cols=259 Identities=25% Similarity=0.283 Sum_probs=212.2
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
++|+++|++++|++.+.+ +..+||++.|+|++|++||.++.++|. +|+|.+
T Consensus 1 ~~v~~iG~~~~D~~~~~~----------~~~~GG~~~NvA~~l~~lG~~~~~is~-------------------vG~D~~ 51 (260)
T PRK09813 1 KKLATIGDNCVDIYPQLG----------KAFSGGNAVNVAVYCTRYGIQPGCITW-------------------VGDDDY 51 (260)
T ss_pred CeEEEeccceeeecccCC----------ccccCccHHHHHHHHHHcCCcceEEEE-------------------ecCcHH
Confidence 479999999999997643 368999999999999999999999999 999999
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCch
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEP 220 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~ 220 (400)
|+++++.|++.||+++++...++ +|+.+++.++ +|+|++..+. .+....+..++.+.+.+++++++|++.+.
T Consensus 52 g~~i~~~l~~~gI~~~~~~~~~~-~t~~~~~~~~-~~~r~~~~~~-~~~~~~~~~~~~~~~~l~~~~~v~~~~~~----- 123 (260)
T PRK09813 52 GTKLKQDLARMGVDISHVHTKHG-VTAQTQVELH-DNDRVFGDYT-EGVMADFALSEEDYAWLAQYDIVHAAIWG----- 123 (260)
T ss_pred HHHHHHHHHHcCCcchheeeecC-CCceEEEEEe-CCcEEeeccC-CCcccccccCHHHHHHHHhCCEEEEeccc-----
Confidence 99999999999999999987665 7888888775 6888876543 22222222222233567899999986431
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCC
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANL 300 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~ 300 (400)
...++++.++++|+++++|++.+.. .+.+.++++++|+++.|+++. ..+.++.++.+.+.|+
T Consensus 124 ---~~~~~~~~~~~~~~~v~~D~~~~~~--------~~~~~~~~~~~d~~~~~~~~~-------~~~~~~~~~~~~~~g~ 185 (260)
T PRK09813 124 ---HAEDAFPQLHAAGKLTAFDFSDKWD--------SPLWQTLVPHLDYAFASAPQE-------DEFLRLKMKAIVARGA 185 (260)
T ss_pred ---hHHHHHHHHHHcCCeEEEEcCCCcc--------HHHHHHhCCceeEEEecCCcc-------hHHHHHHHHHHHHcCC
Confidence 1245677788999999999975421 123556889999999886541 1223456677888999
Q ss_pred cEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccC
Q 015777 301 KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERG 380 (400)
Q Consensus 301 ~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G 380 (400)
+.++||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|+++|+++|++++++.|
T Consensus 186 ~~viit~G~~Ga~~~~~~~~~~~~~~~~~~vDttGAGDaF~ag~i~~~~~g~~-------~~~al~~a~~~aa~~~~~~G 258 (260)
T PRK09813 186 GVVIVTLGENGSIAWDGAQFWRQAPEPVTVVDTMGAGDSFIAGFLCGWLAGMT-------LPQAMAQGTACAAKTIQYHG 258 (260)
T ss_pred CEEEEEECCCceEEEECCEEEecCCcccCCCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccC
Confidence 99999999999999998888999999999999999999999999999999999 99999999999999999998
Q ss_pred C
Q 015777 381 A 381 (400)
Q Consensus 381 ~ 381 (400)
+
T Consensus 259 ~ 259 (260)
T PRK09813 259 A 259 (260)
T ss_pred C
Confidence 5
No 32
>PRK13508 tagatose-6-phosphate kinase; Provisional
Probab=100.00 E-value=1.2e-38 Score=308.77 Aligned_cols=289 Identities=22% Similarity=0.234 Sum_probs=230.2
Q ss_pred EEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 63 VVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 63 v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
+.+-.++++|.+..+++.+.. ........+||++.|+|++|++||.++.++|. +|+ .
T Consensus 3 ~~~t~np~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------vGd-~ 62 (309)
T PRK13508 3 LTVTLNPSIDISYPLDELKLDTVNRVVDVSKTAGGKGLNVTRVLSEFGENVLATGL-------------------IGG-E 62 (309)
T ss_pred EEEecChHHeEEEEeCCeeeCCeEEecceeecCCchHHHHHHHHHHcCCCeEEEEE-------------------ecC-h
Confidence 456678999999888877554 24467889999999999999999999999999 995 7
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc------hhhcCCccEEEEcc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYGS 213 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~------~~~i~~~~~v~~~~ 213 (400)
+|+++++.|++ ||++++++. ++ .|+.++++++ +|+++++++++. . +..++.. .+.++++|++|+++
T Consensus 63 ~G~~i~~~l~~-gI~~~~~~~-~~-~t~~~~~~~~-~g~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~v~~~g 134 (309)
T PRK13508 63 LGQFIAEHLDD-QIKHAFYKI-KG-ETRNCIAILH-EGQQTEILEKGP--E--ISVQEADGFLHHFKQLLESVEVVAISG 134 (309)
T ss_pred hHHHHHHHHHc-CCCceEEEC-CC-CCeeeEEEEe-CCCEEEEECCCC--C--CCHHHHHHHHHHHHHhccCCCEEEEeC
Confidence 89999999999 999987654 33 5677777665 788888776432 2 2222211 24578999999987
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC-cHH---
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDD--- 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~-~~~--- 289 (400)
.... ..+.+...++++.+++.|+++++|++.. .. ..+...+.++|++++|++|++.+++.... +.+
T Consensus 135 ~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~-~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~ 204 (309)
T PRK13508 135 SLPA-GLPVDYYAQLIELANQAGKPVVLDCSGA--------AL-QAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELK 204 (309)
T ss_pred CCCC-CcCHHHHHHHHHHHHHCCCEEEEECCcH--------HH-HHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHH
Confidence 6432 2234667788899999999999999631 11 22222356899999999999999987532 222
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++.++..|++.|+||+|++|++++.+++.+++|++++++||||||||+|+|||+++|++|++ +++|+++|+
T Consensus 205 ~~~~~~~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~Agfi~~l~~g~~-------~~~al~~a~ 277 (309)
T PRK13508 205 EVLQQPLFEGIEWIIVSLGADGAFAKHNDTFYKVDIPKIEVVNPVGSGDSTVAGIASGLLHQED-------DADLLKKAN 277 (309)
T ss_pred HHHHHHHHcCCCEEEEecCCCceEEEeCCceEEEeCCCccccCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 3334555679999999999999999988888889999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++++++.+.. ..+++++++++++|
T Consensus 278 a~aa~~~~~~~~~--~~~~~~~~~~~~~i 304 (309)
T PRK13508 278 VLGMLNAQEKQTG--HVNMANYDELYNQI 304 (309)
T ss_pred HHHHHHhcCcCcC--CCCHHHHHHHHhce
Confidence 9999999999974 57889999998876
No 33
>PRK09513 fruK 1-phosphofructokinase; Provisional
Probab=100.00 E-value=3.1e-38 Score=306.22 Aligned_cols=289 Identities=17% Similarity=0.160 Sum_probs=234.8
Q ss_pred EE-EEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 63 VV-CFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 63 v~-viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|+ |.=+.++|++..+++.+.. +.......+||++.|+|+++++||.++.++|. +|+|
T Consensus 5 ~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~~~~i~~-------------------vG~D 65 (312)
T PRK09513 5 VATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGINVAKVLKDLGIDVTVGGF-------------------LGKD 65 (312)
T ss_pred EEEEecChHHeEEEEcCceecCCeeeecceeecCCchHHHHHHHHHHcCCCeEEEEE-------------------ecCc
Confidence 55 4458999999988887632 35677899999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc------hhhcCCccEEEEc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIFHYG 212 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~------~~~i~~~~~v~~~ 212 (400)
.+|+. ++.|+++||++.+++ .++ +|+.++++++.+|+++++.+.. . .++..+++ .+.++++|++|++
T Consensus 66 ~~~~~-~~~l~~~gv~~~~~~-~~~-~t~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~l~~~d~v~~~ 138 (312)
T PRK09513 66 NQDGF-QQLFSELGIANRFQV-VQG-RTRINVKLTEKDGEVTDFNFSG--F--EVTPADWERFVTDSLSWLGQFDMVAVS 138 (312)
T ss_pred cHHHH-HHHHHHcCCCccEEE-CCC-CCEEEEEEEeCCCcEEEEeCCC--C--CCCHHHHHHHHHHHHhhcCCCCEEEEE
Confidence 99987 689999999987664 344 6888888888889887665422 1 23333221 2457899999998
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHH---
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD--- 289 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~--- 289 (400)
++... ....+...++++.+++.|.++++|++. ...++. +...+|++++|++|+..+++....+.+
T Consensus 139 g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~---~~~~~~~l~~n~~E~~~l~g~~~~~~~~~~ 206 (312)
T PRK09513 139 GSLPR-GVSPEAFTDWMTRLRSQCPCIIFDSSR--------EALVAG---LKAAPWLVKPNRRELEIWAGRKLPELKDVI 206 (312)
T ss_pred CCCCC-CCCHHHHHHHHHHHHhcCCEEEEECCh--------HHHHHH---hccCCeEEcCCHHHHHHHhCCCCCCHHHHH
Confidence 76432 334567778899999999999999962 112222 345789999999999999997654433
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++.+.+.|++.|+||+|++|++++.+++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+
T Consensus 207 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vDttGAGDaf~ag~i~~l~~g~~-------~~~a~~~A~ 279 (312)
T PRK09513 207 EAAHALREQGIAHVVISLGAEGALWVNASGEWIAKPPACDVVSTVGAGDSMVGGLIYGLLMRES-------SEHTLRLAT 279 (312)
T ss_pred HHHHHHHHcCCCEEEEEeCCCCcEEEeCCceEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 3456777889999999999999999888877888888899999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++++++.| .++|+++++++++.+|
T Consensus 280 a~Aa~~~~~~~--~~~~~~~e~~~~l~~~ 306 (312)
T PRK09513 280 AVSALAVSQSN--VGITDRPQLAAMMARV 306 (312)
T ss_pred HHHHHHhhCCC--CCCCCHHHHHHHHhce
Confidence 99999999998 4789999999998775
No 34
>cd01943 MAK32 MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.
Probab=100.00 E-value=1.8e-39 Score=316.70 Aligned_cols=277 Identities=17% Similarity=0.200 Sum_probs=227.5
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHc-CC--Cc--eeeecccccccccceeeeccCCCcCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL-GG--SS--AFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larL-G~--~~--~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+++++|++++|++...+. ..+...+||++.|+|+++++| |. ++ .+++. +|
T Consensus 1 ~~~~~G~~~~d~i~~~~~------~~~~~~~GG~~~N~A~~~~~l~g~~~~~~~~~~~~-------------------vG 55 (328)
T cd01943 1 DFTTLGMFIIDEIEYPDS------EPVTNVLGGAGTYAILGARLFLPPPLSRSISWIVD-------------------KG 55 (328)
T ss_pred CccccCcEEeeccccCCC------CccccccCCchhhHhhceeeecCCccccceeeEEe-------------------cC
Confidence 478999999999998652 356778999999999999999 44 66 88999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~ 216 (400)
+| +|+++++.|+++||++++ ...++.+|+.+++.++++|+|.+.+++ +....++.++++...+..++++|+.+...
T Consensus 56 ~D-~G~~l~~~L~~~GVd~~~-~~~~~~~Tg~~~v~~~~~g~r~~~~~~--~~~~~~~~~~l~~~~~~~a~~~hl~~~~~ 131 (328)
T cd01943 56 SD-FPKSVEDELESWGTGMVF-RRDPGRLTTRGLNIYDGNDRRFFKYLT--PKKRIDVSDDLNSTPLIRSSCIHLICSPE 131 (328)
T ss_pred CC-CCHHHHHHHHhcCCceEE-EeCCCCcchhhhhhcCCCCcceeeecC--cccccccccccccccccCCCeEEEECCHH
Confidence 99 999999999999999998 777778999999988888898877763 34466777778766788999999976532
Q ss_pred cCchhHHHHHHHHHHHhh------CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH--
Q 015777 217 ITEPCKSAHIAAAKAAKD------AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD-- 288 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~------~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~-- 288 (400)
...+...++++.+++ .+..+++|+++... ....++.+.++++++|++++|++|++.+++......
T Consensus 132 ---~~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~----~~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~ 204 (328)
T cd01943 132 ---RCASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSC----DPENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEPSS 204 (328)
T ss_pred ---HHHHHHHHHHHHHHhhccccCCccEEEEecCCccc----ChhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCccc
Confidence 124677888888888 88999999874211 111345577899999999999999999999765321
Q ss_pred -HHHH-----H---HHHhCCCcEEEEEecCCcEEEEe--CCceEEEccccc---cccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 289 -DAVV-----Y---KLFHANLKLLLVTEGPDGCRYYT--KDFSGRVQGLKV---EAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 289 -~~~~-----~---~l~~~g~~~vvvT~G~~G~~~~~--~~~~~~vpa~~v---~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
.+.. . .+...+.+.||||+|++|++++. ++..+++|++++ +++|||||||+|+|||+++|++|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~- 283 (328)
T cd01943 205 DEEKEAVLQALLFSGILQDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALTKS- 283 (328)
T ss_pred hhhhhhhHHHHHHHhhhccCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHHcCCC-
Confidence 1111 1 22456899999999999999988 456788999988 9999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcccCC
Q 015777 355 LQKEDQLRDALRFANACGALTVMERGA 381 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~G~ 381 (400)
+++|+++|+++|++++++.|.
T Consensus 284 ------~~~al~~a~a~Aa~~v~~~G~ 304 (328)
T cd01943 284 ------IDEACIYGSVAASFAIEQVGL 304 (328)
T ss_pred ------HHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999995
No 35
>cd01941 YeiC_kinase_like YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=2.1e-38 Score=303.31 Aligned_cols=276 Identities=27% Similarity=0.319 Sum_probs=222.9
Q ss_pred cEEEEccceeecccCcCCCCccC---CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAE---SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~---~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
.|+++|++++|++..+++.|.+. .......+||+++|+|+++++||.++.++|. +|+|
T Consensus 1 ~v~~~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~lG~~~~~~~~-------------------lG~D 61 (288)
T cd01941 1 EIVVIGAANIDLRGKVSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSA-------------------VGDD 61 (288)
T ss_pred CeEEEEeEEEeeeecccCccccCCCCCeeEEEccCcHHHHHHHHHHHhCCCcEEEEE-------------------EecC
Confidence 38999999999998888765432 2346788999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEccccc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYGSISL 216 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~~~~~ 216 (400)
.+|+.+++.|++.||+++++. .++.+|+.+++.++.+|++++... .+.....+..+.++ .+.+.+++++++.+.
T Consensus 62 ~~g~~i~~~L~~~gI~~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~-- 137 (288)
T cd01941 62 SEGESILEESEKAGLNVRGIV-FEGRSTASYTAILDKDGDLVVALA-DMDIYELLTPDFLRKIREALKEAKPIVVDAN-- 137 (288)
T ss_pred ccHHHHHHHHHHcCCccceee-eCCCCcceEEEEECCCCCEEEEEe-chHhhhhCCHHHHHHHHHHHhcCCEEEEeCC--
Confidence 999999999999999999887 567789999999999999887432 23333333332221 356789999987542
Q ss_pred cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---HHHHHH
Q 015777 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---DDAVVY 293 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~---~~~~~~ 293 (400)
.+++....+++.+++.+.++++|++.. +.+++. .++++++|++++|++|++.+++....+ ..+.++
T Consensus 138 ---~~~~~~~~~~~~a~~~~~~v~~d~~~~-------~~~~~~-~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~ 206 (288)
T cd01941 138 ---LPEEALEYLLALAAKHGVPVAFEPTSA-------PKLKKL-FYLLHAIDLLTPNRAELEALAGALIENNEDENKAAK 206 (288)
T ss_pred ---CCHHHHHHHHHhhhhcCCcEEEEccch-------HHhccc-hhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHH
Confidence 234567788888999999999998632 111221 157889999999999999999875422 123456
Q ss_pred HHHhCCCcEEEEEecCCcEEEEeC---CceEEEcc-ccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 294 KLFHANLKLLLVTEGPDGCRYYTK---DFSGRVQG-LKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 294 ~l~~~g~~~vvvT~G~~G~~~~~~---~~~~~vpa-~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
.+...+++.++||+|++|++++++ +..+++|+ +++++||||||||+|.|||++++++|++ +++|+++|+
T Consensus 207 ~~~~~~~~~vvit~G~~Ga~~~~~~~~~~~~~~~~~~~~~~vDttGAGDaf~a~~~~~l~~g~~-------~~~al~~a~ 279 (288)
T cd01941 207 ILLLPGIKNVIVTLGAKGVLLSSREGGVETKLFPAPQPETVVNVTGAGDAFVAGLVAGLLEGMS-------LDDSLRFAQ 279 (288)
T ss_pred HHHHcCCcEEEEEeCCCcEEEEecCCCceeEEecCCCCccceeCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 677889999999999999999987 46678898 5889999999999999999999999999 999999999
Q ss_pred HHHHHHhcc
Q 015777 370 ACGALTVME 378 (400)
Q Consensus 370 a~Aa~~v~~ 378 (400)
++|+++|+.
T Consensus 280 ~~Aa~~~~~ 288 (288)
T cd01941 280 AAAALTLES 288 (288)
T ss_pred HHHHHHhcC
Confidence 999999863
No 36
>PRK10294 6-phosphofructokinase 2; Provisional
Probab=100.00 E-value=6.5e-38 Score=303.55 Aligned_cols=290 Identities=21% Similarity=0.220 Sum_probs=232.8
Q ss_pred EEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 64 VCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 64 ~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
.+-=+..+|.+..+++.+.. ........+||++.|+|++|++||.++.+++. +|+ .+
T Consensus 6 ~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~lG~~~~~i~~-------------------vG~-~~ 65 (309)
T PRK10294 6 TLTLAPSLDSATITPQIYPEGKLRCSAPVFEPGGGGINVARAIAHLGGSATAIFP-------------------AGG-AT 65 (309)
T ss_pred EEecChHHeEEEEeCceeeCCeEEeccceecCCccHHHHHHHHHHcCCCeEEEEE-------------------ecC-cc
Confidence 34458899999998876532 45667888999999999999999999999999 996 79
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch-----hhcCCccEEEEcccc
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL-----SLITKAKIFHYGSIS 215 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~-----~~i~~~~~v~~~~~~ 215 (400)
|+++++.|++.||++++++..++. +...++..+++|++.++++.+ .. ++.++++. +.+++++++|++++.
T Consensus 66 g~~i~~~l~~~gv~~~~~~~~~~~-~~~~~i~~~~~g~~~~~~~~~--~~--~~~~~~~~l~~~~~~~~~~~~~~i~g~~ 140 (309)
T PRK10294 66 GEHLVSLLADENVPVATVEAKDWT-RQNLHVHVEASGEQYRFVMPG--AA--LNEDEFRQLEEQVLEIESGAILVISGSL 140 (309)
T ss_pred HHHHHHHHHHcCCCceEEECCCCC-eeeEEEEEcCCCcEEEEECCC--CC--CCHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 999999999999999999876553 444456677788887666532 22 44444332 236788999997754
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVV 292 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~ 292 (400)
. ...+.+.+.++++.+++.|+++++|++. +..++.+ .++++|++++|++|+..|++....+. ++++
T Consensus 141 ~-~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~~--~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~ 209 (309)
T PRK10294 141 P-PGVKLEKLTQLISAAQKQGIRCIIDSSG--------DALSAAL--AIGNIELVKPNQKELSALVNRDLTQPDDVRKAA 209 (309)
T ss_pred C-CCCCHHHHHHHHHHHHHcCCeEEEeCCC--------HHHHHHH--hcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHH
Confidence 3 2334577889999999999999999862 1222221 24589999999999999998764433 2456
Q ss_pred HHHHhCC-CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 293 YKLFHAN-LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 293 ~~l~~~g-~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+.+++.+ ++.|+||+|++|++++.+++.+++++++++++|||||||+|+|||+++|++|++ +++|+++|+++
T Consensus 210 ~~l~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~ag~l~~l~~g~~-------~~~al~~a~a~ 282 (309)
T PRK10294 210 QELVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVRFGVAA 282 (309)
T ss_pred HHHHHcCCCCEEEEecCCCceEEEcCCccEEEeCCCcccCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 6777776 899999999999999988878889999999999999999999999999999999 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 372 GALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|+++|++.|+++ .++++++++++++
T Consensus 283 aa~~v~~~G~~~--~~~~~~~~~~~~~ 307 (309)
T PRK10294 283 GSAATLNQGTRL--CSHDDTQKIYAYL 307 (309)
T ss_pred HHHHhcCCCCCC--CCHHHHHHHHHHh
Confidence 999999999864 6888898888765
No 37
>TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family. This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.
Probab=100.00 E-value=4e-38 Score=303.98 Aligned_cols=284 Identities=27% Similarity=0.312 Sum_probs=229.0
Q ss_pred cceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHH
Q 015777 68 EMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYML 144 (400)
Q Consensus 68 ~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i 144 (400)
++.+|++..+++.+.. ........+||.+.|+|++++|||.++.++|. +|+| +|+.+
T Consensus 7 ~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~a~~l~~lg~~~~~i~~-------------------vG~D-~g~~i 66 (303)
T TIGR03168 7 NPAIDLTIEVDGLTPGEVNRVAAVRKDAGGKGINVARVLARLGAEVVATGF-------------------LGGF-TGEFI 66 (303)
T ss_pred chHHeEEEEcCccccCceeecCcccccCCcchhhHHHHHHHcCCCeEEEEE-------------------eCCc-hhHHH
Confidence 4567887777765321 34466789999999999999999999999999 9998 79999
Q ss_pred HHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEEEccccccC
Q 015777 145 ADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLIT 218 (400)
Q Consensus 145 ~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~~~~~~~~~ 218 (400)
++.|++.||++++++... .|++++++.+.+|++..+.+.+ . .++.++++. +.+++++++|++++...
T Consensus 67 ~~~l~~~gI~~~~i~~~~--~t~~~~~~~~~~g~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~- 139 (303)
T TIGR03168 67 EALLAEEGIKNDFVEVKG--ETRINVKIKESSGEETELNEPG--P--EISEEELEQLLEKLRELLASGDIVVISGSLPP- 139 (303)
T ss_pred HHHHHHcCCCceEEECCC--CCEEeEEEEeCCCCEEEEeCcC--C--CCCHHHHHHHHHHHHHhccCCCEEEEeCCCCC-
Confidence 999999999999887653 4666777777788776655422 2 244444331 34789999999775322
Q ss_pred chhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHHHHH
Q 015777 219 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKL 295 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l 295 (400)
..+.+.+..+++.++++|+++++|++. ...++ .+..++|++++|++|+..+++....+. .+.++.+
T Consensus 140 ~~~~~~~~~~~~~~~~~g~~v~~D~~~--------~~~~~---~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l 208 (303)
T TIGR03168 140 GVPPDFYAQLIAIARKRGAKVILDTSG--------EALRE---ALAAKPFLIKPNHEELEELFGRELKTEEEIIEAAREL 208 (303)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCc--------HHHHH---HHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHHH
Confidence 233566778889999999999999963 11222 233479999999999999999754332 3456677
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
..++.+.+|||+|.+|++++.+++.+++|+++++++|||||||+|.|+|++++++|++ +++|+++|+++|+++
T Consensus 209 ~~~g~~~vviT~g~~G~~~~~~~~~~~~~~~~~~~vDttGAGD~F~a~~~~~l~~g~~-------i~~a~~~A~~~aa~~ 281 (303)
T TIGR03168 209 LDRGAENVLVSLGADGALLVTKEGALKATPPKVEVVNTVGAGDSMVAGFLAGLARGLS-------LEEALRFAVAAGSAA 281 (303)
T ss_pred HHcCCCEEEEeecCCCcEEEeCCceEEeeCCcceeecCcCHHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 8889999999999999999999888899999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|++.|+. .|+++++++++.++
T Consensus 282 ~~~~G~~--~~~~~~~~~~~~~~ 302 (303)
T TIGR03168 282 AFSPGTG--LPDPEDVEELLDQV 302 (303)
T ss_pred hcCCCcC--CCCHHHHHHHHhhc
Confidence 9999984 58999999988764
No 38
>TIGR01231 lacC tagatose-6-phosphate kinase. This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation.
Probab=100.00 E-value=3.7e-38 Score=305.24 Aligned_cols=292 Identities=19% Similarity=0.185 Sum_probs=227.8
Q ss_pred EEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 65 CFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 65 viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
|.=+..+|....+++.+.. ...++...+||++.|+|++|++||.++.++|. +|+ .+|
T Consensus 4 ~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~-------------------vG~-~~G 63 (309)
T TIGR01231 4 VTLNPSVDISYPLTALKLDTVNRVQEVSKTAGGKGLNVTRVLAQVGDPVLASGF-------------------LGG-KLG 63 (309)
T ss_pred EEcchHHeEEEEcCCeeeCceEeeceeeecCCccHHHHHHHHHHcCCCeEEEEE-------------------ecC-hhH
Confidence 3346678887777765543 34567889999999999999999999999999 997 599
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCcccc--chhhcCCccEEEEccccccCc
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL--DLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l--~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+++++.|++.||+++++...+ .|+.++.++. +|+++++++++.........+.+ ..+.+++++++|+++.... .
T Consensus 64 ~~i~~~l~~~GV~~~~~~~~~--~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~-~ 139 (309)
T TIGR01231 64 EFIEKELDHSDIKHAFYKISG--ETRNCIAILH-EGQQTEILEQGPEISNQEAAGFLKHFEQLLEKVEVVAISGSLPK-G 139 (309)
T ss_pred HHHHHHHHHcCCceeEEECCC--CCEEeEEEEe-CCCEEEEeCCCCCCCHHHHHHHHHHHHHHhccCCEEEEECCCCC-C
Confidence 999999999999999887654 3555555553 68888877644221110111111 1245789999999876432 2
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC-cHH---HHHHHH
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-YDD---AVVYKL 295 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~-~~~---~~~~~l 295 (400)
.+.....++++.++++|+++++|++++ .. ..+.+.+.++|++++|++|++.+++.... +.+ +.++.+
T Consensus 140 ~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~-~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~~~ 210 (309)
T TIGR01231 140 LPQDYYAQIIERCQNKGVPVVLDCSGA--------TL-QTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALSQP 210 (309)
T ss_pred cCHHHHHHHHHHHHhCCCeEEEECChH--------HH-HHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 335677889999999999999999742 11 22334467899999999999999986432 222 234455
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
...|++.|++|+|++|++++.+++.+++|++++++||||||||+|+|||++++++|++ +++|+++|+++|+++
T Consensus 211 ~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~agfl~~l~~g~~-------~~~a~~~a~a~aa~~ 283 (309)
T TIGR01231 211 LFSGIEWIIVSLGAQGAFAKHGHTFYKVNIPTISVVNPVGSGDSTVAGITSALLNHES-------DHDLLKKANTLGMLN 283 (309)
T ss_pred HHcCCCEEEEccCCCceEEEeCCeeEEeeCCccCcCCCcchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 5679999999999999999998888889999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++.++ +..+++++++++.+|
T Consensus 284 ~~~~~~--~~~~~~~~~~~~~~i 304 (309)
T TIGR01231 284 AQEAQT--GHVNLNNYDDLFNQI 304 (309)
T ss_pred hcCccc--CCCCHHHHHHHHhce
Confidence 999886 457899999998876
No 39
>PLN02548 adenosine kinase
Probab=100.00 E-value=1.6e-37 Score=303.80 Aligned_cols=263 Identities=20% Similarity=0.261 Sum_probs=208.5
Q ss_pred CCCceecCCChHHHHHHH---HHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceec
Q 015777 85 SPAFKKAPGGAPANVAVG---IARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFD 161 (400)
Q Consensus 85 ~~~~~~~~GG~~~N~A~~---larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~ 161 (400)
.......+||++.|++.. ++++|.++.++|. +|+|.+|+++++.|+++||+++++..
T Consensus 44 ~~~~~~~~GG~~~Nva~~a~~l~~lg~~~~~ig~-------------------vG~D~~g~~i~~~L~~~gVd~~~~~~- 103 (332)
T PLN02548 44 KYNVEYIAGGATQNSIRVAQWMLQIPGATSYMGC-------------------IGKDKFGEEMKKCATAAGVNVHYYED- 103 (332)
T ss_pred cCCceecCCcHHHHHHHHHHHHhcCCCcEEEEEE-------------------EcCChhHHHHHHHHHHcCCceeeecc-
Confidence 456788999999997554 4667999999999 99999999999999999999998754
Q ss_pred CCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc----hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCC
Q 015777 162 PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD----LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV 237 (400)
Q Consensus 162 ~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~----~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~ 237 (400)
++.+|+.+++.++ +|+|+++.+. ++...++.+++. .+.++.++++|++++... .+.+....+++.++++|+
T Consensus 104 ~~~~T~~~~i~~~-~g~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~ 178 (332)
T PLN02548 104 ESTPTGTCAVLVV-GGERSLVANL--SAANCYKVEHLKKPENWALVEKAKFYYIAGFFLT--VSPESIMLVAEHAAANNK 178 (332)
T ss_pred CCCCCceEEEEEe-cCCceeeecc--chhhcCCHHHhcChhhHhHHhhCCEEEEEEEEcc--CCHHHHHHHHHHHHHcCC
Confidence 6678999998886 7899887653 333344444332 245788999999886442 234667788888999999
Q ss_pred eEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC---CcHHHHHHHHHhC------CCcEEEEEec
Q 015777 238 VLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED---PYDDAVVYKLFHA------NLKLLLVTEG 308 (400)
Q Consensus 238 ~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~---~~~~~~~~~l~~~------g~~~vvvT~G 308 (400)
++.+|++. .+|. +..++.++++++++|++++|++|++.+++... .+.++.++.+... +++.+|||+|
T Consensus 179 ~~~~~~~~--~~~~--~~~~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~g~~~~~vvvT~G 254 (332)
T PLN02548 179 TFMMNLSA--PFIC--EFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPKASGTHKRTVVITQG 254 (332)
T ss_pred EEEEECCC--hhHH--HHhHHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHHHHHHHhhhhccccCCEEEEEeC
Confidence 88777742 3332 22345678889999999999999999988643 2233444444321 5889999999
Q ss_pred CCcEEEEeCCceEEEccc---cccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 309 PDGCRYYTKDFSGRVQGL---KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 309 ~~G~~~~~~~~~~~vpa~---~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
++|++++.+++.+++|++ ++++||||||||+|+|||++++++|++ +++|+++|+++|+++|++.|+.+
T Consensus 255 ~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~-------l~eal~~a~aaAa~~v~~~G~~~ 325 (332)
T PLN02548 255 ADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKD-------IEECVRAGNYAANVIIQRSGCTY 325 (332)
T ss_pred CCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCCC
Confidence 999999998888888764 347999999999999999999999999 99999999999999999999864
No 40
>cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.
Probab=100.00 E-value=4.4e-37 Score=294.79 Aligned_cols=273 Identities=25% Similarity=0.252 Sum_probs=221.9
Q ss_pred EEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 63 VVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 63 v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
..++|+.++|++..+++.+.. ........+||.+.|+|++|++||.++.++|. +|+|
T Consensus 3 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~Nva~~la~lG~~v~~is~-------------------vG~D- 62 (289)
T cd01164 3 YTVTLNPAIDLTIELDQLQPGEVNRVSSTRKDAGGKGINVARVLKDLGVEVTALGF-------------------LGGF- 62 (289)
T ss_pred EEEecChHHeEEEEcCcccCCceeecccccccCCcchhHHHHHHHHcCCCeEEEEE-------------------ccCc-
Confidence 468899999999999987643 35567889999999999999999999999999 9998
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEEEcc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGS 213 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~~~~ 213 (400)
+|+++++.|++.||++++++... .|++.+++.+.+|+++.+... +. .++.++++. +.+++++++|+++
T Consensus 63 ~g~~i~~~l~~~gi~~~~~~~~~--~t~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~g 136 (289)
T cd01164 63 TGDFFEALLKEEGIPDDFVEVAG--ETRINVKIKEEDGTETEINEP--GP--EISEEELEALLEKLKALLKKGDIVVLSG 136 (289)
T ss_pred hhHHHHHHHHHcCCCceEEECCC--CCEEEEEEEeCCCCEEEEeCC--CC--CCCHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 89999999999999999887653 467777777766776655432 22 244443321 3467899999976
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhHHhcccCCCCCc---HH
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISFLTQGEDPY---DD 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E~~~l~~~~~~~---~~ 289 (400)
.... ....+....+++.+++.++++++|++.+ ..+ +++ +.+|++++|++|++.+++....+ ..
T Consensus 137 ~~~~-~~~~~~~~~~~~~~~~~~~~i~~D~~~~--------~~~----~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~ 203 (289)
T cd01164 137 SLPP-GVPADFYAELVRLAREKGARVILDTSGE--------ALL----AALAAKPFLIKPNREELEELFGRPLGDEEDVI 203 (289)
T ss_pred CCCC-CcCHHHHHHHHHHHHHcCCeEEEECChH--------HHH----HHHhcCCcEECCCHHHHHHHhCCCCCCHHHHH
Confidence 5321 2234567788888999999999999631 122 233 69999999999999999875433 23
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++.+++.+++.++||+|++|++++.+++.+++++++++++|||||||+|.|||++++++|++ +++|+++|+
T Consensus 204 ~~~~~l~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~~vvDttGAGDaf~a~~i~~l~~g~~-------~~~a~~~A~ 276 (289)
T cd01164 204 AAARKLIERGAENVLVSLGADGALLVTKDGVYRASPPKVKVVSTVGAGDSMVAGFVAGLAQGLS-------LEEALRLAV 276 (289)
T ss_pred HHHHHHHHcCCCEEEEecCCCCCEEEcCCcEEEecCCCccccCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 4566788889999999999999999988888899999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCC
Q 015777 370 ACGALTVMERGA 381 (400)
Q Consensus 370 a~Aa~~v~~~G~ 381 (400)
++|+++|++.|+
T Consensus 277 ~~Aa~~~~~~G~ 288 (289)
T cd01164 277 AAGSATAFSPGT 288 (289)
T ss_pred HHHHHHhcCccC
Confidence 999999999985
No 41
>PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional
Probab=100.00 E-value=8.8e-37 Score=312.28 Aligned_cols=288 Identities=21% Similarity=0.215 Sum_probs=225.7
Q ss_pred CcEEEEccceeecccCcC--CC----C--ccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCC
Q 015777 61 PLVVCFGEMLIDFVPTVS--GL----S--LAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPC 132 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~--~~----~--~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~ 132 (400)
++|+|||++++|++..++ +. | ..........+|| ++|+|++|++||.++.++|.
T Consensus 11 ~~ilviG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG-a~NvA~~la~LG~~v~~i~~----------------- 72 (473)
T PRK11316 11 AGVLVVGDVMLDRYWYGPTSRISPEAPVPVVKVNQIEERPGG-AANVAMNIASLGAQARLVGL----------------- 72 (473)
T ss_pred CcEEEECccEEeeeeecccceeCCCCCCCEEEeeeEEecCcH-HHHHHHHHHHcCCcEEEEEE-----------------
Confidence 479999999999997642 22 2 1234567788999 59999999999999999999
Q ss_pred CcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc---hhhcCCccEE
Q 015777 133 PKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD---LSLITKAKIF 209 (400)
Q Consensus 133 ~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~---~~~i~~~~~v 209 (400)
+|+|.+|+++++.|++.||+++++.. ++.+|+.++++++.+++...... ......+..+.+. .+.+++++++
T Consensus 73 --vG~D~~g~~i~~~L~~~gI~~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~~~~v 147 (473)
T PRK11316 73 --TGIDEAARALSKLLAAVGVKCDFVSV-PTHPTITKLRVLSRNQQLIRLDF--EEGFEGVDPQPLLERIEQALPSIGAL 147 (473)
T ss_pred --EcCCHHHHHHHHHHHHcCCceeEEEc-CCCCCCeeEEEEeCCceEEeccc--ccCCCchhHHHHHHHHHHHhccCCEE
Confidence 99999999999999999999998876 56679888888875544222111 1111122333221 2568899999
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH-
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD- 288 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~- 288 (400)
|++++.... .+...++++.++++|+++++||+... ...++.+|++++|++|++.+++......
T Consensus 148 ~is~~~~~~---~~~~~~~~~~~k~~g~~vv~Dp~~~~-------------~~~~~~~dil~pN~~Ea~~l~g~~~~~~~ 211 (473)
T PRK11316 148 VLSDYAKGA---LASVQAMIQLARKAGVPVLIDPKGTD-------------FERYRGATLLTPNLSEFEAVVGKCKDEAE 211 (473)
T ss_pred EEecCCccc---hhHHHHHHHHHHhcCCeEEEeCCCCC-------------ccccCCCeEECcCHHHHHHHhCCCCCHHH
Confidence 997664311 24567888899999999999997421 1235689999999999999998532211
Q ss_pred -HHHHHHH-HhCCCcEEEEEecCCcEEEEeCCc-eEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHH
Q 015777 289 -DAVVYKL-FHANLKLLLVTEGPDGCRYYTKDF-SGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 365 (400)
Q Consensus 289 -~~~~~~l-~~~g~~~vvvT~G~~G~~~~~~~~-~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al 365 (400)
.+.++++ .+.|++.++||+|.+|++++.+++ .+++|+++++++||+||||+|.|||+++|++|++ +++|+
T Consensus 212 ~~~~~~~l~~~~g~~~vvVT~G~~G~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~aa~~~~l~~g~~-------~~~al 284 (473)
T PRK11316 212 LVEKGMKLIADYDLSALLVTRSEQGMTLLQPGKAPLHLPTQAREVYDVTGAGDTVISVLAAALAAGNS-------LEEAC 284 (473)
T ss_pred HHHHHHHHHHhcCCCEEEEEecCCCcEEEecCCceEEecCcCCCCCCCCCCcHHHHHHHHHHHHcCCC-------HHHHH
Confidence 2233444 467999999999999999888775 5789999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 366 RFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 366 ~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
++|+++|++++++.|+.+ ++.+++++++.
T Consensus 285 ~~A~a~Aa~~v~~~G~~~--~~~~~l~~~l~ 313 (473)
T PRK11316 285 ALANAAAGVVVGKLGTST--VSPIELENALR 313 (473)
T ss_pred HHHHHHHHhhcccCCCcc--CCHHHHHHHHh
Confidence 999999999999999864 78999999887
No 42
>PLN02630 pfkB-type carbohydrate kinase family protein
Probab=100.00 E-value=5.6e-36 Score=291.58 Aligned_cols=273 Identities=20% Similarity=0.231 Sum_probs=220.3
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.+.++|+|||++++|++....+ .....+||+++|+|.+|+|||.++.++|+ +|+
T Consensus 9 ~~~~~vlvvG~~~~D~i~~~g~-------~~~~~~GG~a~N~A~alarLG~~~~lis~-------------------VG~ 62 (335)
T PLN02630 9 IPQRRVLIVGNYCHDVLIQNGS-------VTAESLGGAASFISNVLDALSVECELVSK-------------------VGP 62 (335)
T ss_pred CCCCCEEEEeeeeeeEEEeCCc-------EEEEecCcHHHHHHHHHHHcCCceEEEEE-------------------ecC
Confidence 5667899999999999977532 24678999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcC-----CCCeeEEEecCCCccccCCccccchhhcCCccEEEEc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRS-----DGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYG 212 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~-----~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~ 212 (400)
|.. .+|+...+.. ++.+|+.+++++++ +|+++++.. .+++..+++++++...+..++++++.
T Consensus 63 D~~----------~~v~~~~~~~-~~~~T~~~~~~~~~g~~~~~~e~~i~~~--~ga~~~l~~~di~~~~~~~~~~~~l~ 129 (335)
T PLN02630 63 DFL----------YQVSHPPIVI-PDSKTTEFHADFDQGIDGNGHEDRVLKR--VCACDPIEPSDIPDMRYEFGMAVGVA 129 (335)
T ss_pred Ccc----------ccccccceec-CCCCceEEEEEEcCCcccCCCCeEEEEe--ccccCCCChHHCCHHHhcccceeeec
Confidence 952 3777655544 67789999998876 567777765 67777888888876567777777664
Q ss_pred cccccCchhHHHHHHHHHHHhh-----CCCeEEEeCCCC-CCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC
Q 015777 213 SISLITEPCKSAHIAAAKAAKD-----AGVVLSYDPNLR-LPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP 286 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~-----~g~~v~~D~~~~-~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~ 286 (400)
+. .+.++..++++.++. +|+.+++|+++. ...|...+ ..+.++++++|++++|++|++.+
T Consensus 130 ~e-----i~~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~~~~---~~~~~~L~~iDil~~ne~Ea~~l------ 195 (335)
T PLN02630 130 GE-----ILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEE---TGFYDMLPRIGFLKASSEEALFI------ 195 (335)
T ss_pred CC-----CcHHHHHHHHHHhhhheeccCceEEecCCcccccccchhhH---HHHHHHHHhCCEEEecHHHHhhc------
Confidence 32 335678888888887 799999999863 44442111 23567889999999999999876
Q ss_pred cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHH
Q 015777 287 YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 366 (400)
Q Consensus 287 ~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~ 366 (400)
+.++. .+ ...|+||+|++|++++.+++.+++|+++++++|||||||+|+|||++++++|++ +++|++
T Consensus 196 ~~~~~----~~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vDttGAGDaF~agfi~~l~~g~~-------~~~a~~ 262 (335)
T PLN02630 196 DVEEV----RQ--KCCVIVTNGKKGCRIYWKDGEMRVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA-------VPDAAL 262 (335)
T ss_pred CHHHH----cc--CCEEEEEECCCceEEEECCeeEEeCCCCCCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHH
Confidence 11222 12 248999999999999998888899999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 367 FANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 367 ~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+++|++++++.|. .-.+++++++.++++
T Consensus 263 ~A~a~aa~~v~~~G~--~~~~~~~l~~~~~~i 292 (335)
T PLN02630 263 LGNYFGSLAVEQVGI--PKFDLRQLQRVKDEV 292 (335)
T ss_pred HHHHHHHHHhCcCCC--CCCCHHHHHHHhhcE
Confidence 999999999999995 335899999998775
No 43
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=279.80 Aligned_cols=285 Identities=25% Similarity=0.328 Sum_probs=233.9
Q ss_pred cceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHH
Q 015777 68 EMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYML 144 (400)
Q Consensus 68 ~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i 144 (400)
+..+|+...++..... +.......+||+|.|+|..|++||.++..+|+ +|.+ .|+++
T Consensus 8 NPaiD~~~~l~~l~~g~vNr~~~~~~~aGGKGINVa~vL~~lG~~~~a~Gf-------------------lGg~-tg~~~ 67 (310)
T COG1105 8 NPALDYTVFLDELELGEVNRVRAVTKTAGGKGINVARVLKDLGIPVTALGF-------------------LGGF-TGEFF 67 (310)
T ss_pred ChhHhheeecccccccceeeeccceecCCCCceeHHHHHHHcCCCceEEEe-------------------cCCc-cHHHH
Confidence 4567777666544332 45567889999999999999999999999999 9995 89999
Q ss_pred HHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEEEccccccC
Q 015777 145 ADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFHYGSISLIT 218 (400)
Q Consensus 145 ~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~~~~~~~~~ 218 (400)
.+.|++.||..+++++..++|+++.+.. +.+|+.+-+.. ++. .+++++++. ..+++.|+++++| ++..
T Consensus 68 ~~~l~~~gi~~~fv~v~g~TRinvki~~-~~~~~~Tein~--~Gp--~is~~~~~~~l~~~~~~l~~~d~VvlsG-SlP~ 141 (310)
T COG1105 68 VALLKDEGIPDAFVEVKGDTRINVKILD-EEDGEETEINF--PGP--EISEAELEQFLEQLKALLESDDIVVLSG-SLPP 141 (310)
T ss_pred HHHHHhcCCCceEEEccCCCeeeEEEEe-cCCCcEEEecC--CCC--CCCHHHHHHHHHHHHHhcccCCEEEEeC-CCCC
Confidence 9999999999999998877777666553 12444555543 332 356555542 3477889887755 3334
Q ss_pred chhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHHHHH
Q 015777 219 EPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKL 295 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l 295 (400)
..+.+.+.++++.++++|+++++|.. .+.+.+.++. .++++|||.+|++.++|.+..+. .+.++++
T Consensus 142 g~~~d~y~~li~~~~~~g~~vilD~S--------g~~L~~~L~~---~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a~~l 210 (310)
T COG1105 142 GVPPDAYAELIRILRQQGAKVILDTS--------GEALLAALEA---KPWLIKPNREELEALFGRELTTLEDVIKAAREL 210 (310)
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEECC--------hHHHHHHHcc---CCcEEecCHHHHHHHhCCCCCChHHHHHHHHHH
Confidence 45578899999999999999999974 5555555443 59999999999999999987744 3455678
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
+..|+++|+|++|.+|+++.+++..+++.++++++++|+||||+|+|||+++++++++ +++++++|+++|+.+
T Consensus 211 ~~~g~~~ViVSlG~~Gal~~~~~~~~~a~~p~~~vvstVGAGDs~VAGf~~~~~~~~~-------~e~~l~~avA~g~a~ 283 (310)
T COG1105 211 LAEGIENVIVSLGADGALLVTAEGVYFASPPKVQVVSTVGAGDSMVAGFLAGLLKGKS-------LEEALRFAVACGAAA 283 (310)
T ss_pred HHCCCCEEEEEecCcccEEEccCCeEEEeCCCcceecCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999989999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++.+. +++++++++++++++
T Consensus 284 ~~~~~~--~~~~~~~~~~~~~~v 304 (310)
T COG1105 284 ASQKGT--GIPDLDQLKKIYAQV 304 (310)
T ss_pred hhcCCC--CCCCHHHHHHHhhhe
Confidence 999996 679999999988875
No 44
>cd01937 ribokinase_group_D Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=9.3e-36 Score=280.27 Aligned_cols=254 Identities=20% Similarity=0.241 Sum_probs=201.4
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
+|+++|++++|++...+ .....+||++.|+|++|++||.++.++|. +|+|.+|
T Consensus 1 ~il~iG~~~iD~~~~~~--------~~~~~~GG~~~Nva~~la~lG~~~~~i~~-------------------vG~D~~g 53 (254)
T cd01937 1 KIVIIGHVTIDEIVTNG--------SGVVKPGGPATYASLTLSRLGLTVKLVTK-------------------VGRDYPD 53 (254)
T ss_pred CeEEEcceeEEEEecCC--------ceEEecCchhhhHHHHHHHhCCCeEEEEe-------------------eCCCchH
Confidence 58999999999998642 34688999999999999999999999999 9999999
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchh
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPC 221 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~ 221 (400)
+ ++.|+++||++.. . ...+|+.+++.++.+|++.+.++.+. ....... ...+.++|++|+++++
T Consensus 54 ~--~~~l~~~gv~~~~--~-~~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~------ 117 (254)
T cd01937 54 K--WSDLFDNGIEVIS--L-LSTETTTFELNYTNEGRTRTLLAKCA--AIPDTES---PLSTITAEIVILGPVP------ 117 (254)
T ss_pred H--HHHHHHCCcEEEE--e-cCCCeEEEEEEecCCCCeeeeecccc--CCccccc---ccccCcccEEEECCCc------
Confidence 9 6889999999642 2 33367777777777788888776432 2122111 2456789999998752
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+....+.+.+ .++++|++.....|... +..+.++++++|++++|++|++.+ .+.++.++.+.+.|++
T Consensus 118 ~~~~~~~~~~~----~~v~~D~~~~~~~~~~~---~~~~~~~l~~~di~~~n~~E~~~~-----~~~~~~~~~l~~~g~~ 185 (254)
T cd01937 118 EEISPSLFRKF----AFISLDAQGFLRRANQE---KLIKCVILKLHDVLKLSRVEAEVI-----STPTELARLIKETGVK 185 (254)
T ss_pred chhcHHHHhhh----hheeEccccceeecccc---chHHHhhcccCcEEEEcHHHHhhc-----CCHHHHHHHHHHcCCC
Confidence 22333333322 78999998643323221 122567899999999999999883 2345677788889999
Q ss_pred EEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 302 LLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 302 ~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|+||+|.+|+.++++++.+++++++++++|||||||+|+|||++++++|++ +++|+++|+++|+++|+
T Consensus 186 ~vvvt~g~~g~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~i~ 254 (254)
T cd01937 186 EIIVTDGEEGGYIFDGNGKYTIPASKKDVVDPTGAGDVFLAAFLYSRLSGKD-------IKEAAEFAAAAAAKFIE 254 (254)
T ss_pred EEEEeeCCcceEEEECCccEEccccCceeccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhC
Confidence 9999999999999999888899999999999999999999999999999999 99999999999999874
No 45
>cd01946 ribokinase_group_C Ribokinase-like subgroup C. Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Probab=100.00 E-value=2.5e-35 Score=281.00 Aligned_cols=273 Identities=19% Similarity=0.250 Sum_probs=208.3
Q ss_pred cEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHH
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFG 141 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g 141 (400)
.|+|+|++++|++.... . .....+||++.|+|.+++||| ++.+++. +|+| +|
T Consensus 1 ~v~~~G~~~~D~~~~~~------~-~~~~~~GG~a~N~a~~la~lg-~v~~i~~-------------------vG~D-~g 52 (277)
T cd01946 1 SLLVVGSVAFDAIETPF------G-KVDKALGGSATYFSLSASYFT-DVRLVGV-------------------VGED-FP 52 (277)
T ss_pred CeEEEEEeeeeeecCCC------c-eeeeccCchHHHHHHHHHHhc-cceeEEe-------------------ccCc-Ch
Confidence 38999999999994321 1 245779999999999999998 6999999 9999 89
Q ss_pred HHHHHHHHHCCCCCCCceecCCCCceEEEEEEc--CCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 142 YMLADILKENNVNGAGMRFDPGARTALAFVTLR--SDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 142 ~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~--~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+.+++.|+++||+++++++.++.+|........ .++++..... ......+.+ .+ .+.+++++++|++++.
T Consensus 53 ~~~~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~-~~~~~~~~~v~~~~~~---- 124 (277)
T cd01946 53 EEDYKLLNSHNIVTLGLLSKEDGKTFHWAGRYHYDLNEADTLDTD--LNVFADFDP-QL-PEHYKDSEFVFLGNIA---- 124 (277)
T ss_pred HHHHHHHHhccCcceeEEEecCCCeEEEeeEehhhcccccchhhh--hhHHhhcCC-CC-hHHhhcCCEEEECCCC----
Confidence 999999999999999998877666622111100 0122222111 111111211 12 2557889999998653
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCC
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g 299 (400)
.+...++++.+++. .++++|+. ..|. ....+.++++++++|++++|++|++.+++.. +..+.++.+.+.|
T Consensus 125 --~~~~~~~~~~~~~~-~~v~~D~~---~~~~--~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~--~~~~~~~~l~~~g 194 (277)
T cd01946 125 --PELQREVLEQVKDP-KLVVMDTM---NFWI--SIKPEKLKKVLAKVDVVIINDGEARQLTGAA--NLVKAARLILAMG 194 (277)
T ss_pred --HHHHHHHHHHHHhC-CEEEEccH---HHhh--hhhHHHHHHHhccCCEEeCCHHHHHHHhCCc--hHHHHHHHHHHcC
Confidence 34566778878777 88999983 2342 1234567778999999999999999999854 2356677888899
Q ss_pred CcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 300 ~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++.|++|+|.+|++++.+++.+++|+++++ ++|||||||+|.|||+++|++|++. .+.++++|+++|+++|+++|++
T Consensus 195 ~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vDttGAGDaF~Agfl~~l~~~~~~--~~~~~~~a~~~a~~~aa~~~~~ 272 (277)
T cd01946 195 PKALIIKRGEYGALLFTDDGYFAAPAYPLESVFDPTGAGDTFAGGFIGYLASQKDT--SEANMRRAIIYGSAMASFCVED 272 (277)
T ss_pred CCEEEEecCCCcEEEEECCceEEcCCcccCccCCCCCchHHHHHHHHHHHHhCCCc--chhhHHHHHHHhHHHHhhhhhh
Confidence 999999999999999998888899998885 8999999999999999999998541 2445999999999999999999
Q ss_pred cCCC
Q 015777 379 RGAI 382 (400)
Q Consensus 379 ~G~~ 382 (400)
.|+.
T Consensus 273 ~G~~ 276 (277)
T cd01946 273 FGTK 276 (277)
T ss_pred cCCC
Confidence 9964
No 46
>KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism]
Probab=99.98 E-value=7.4e-31 Score=244.35 Aligned_cols=288 Identities=25% Similarity=0.314 Sum_probs=231.1
Q ss_pred cEEEEccceeecccCcCCCCcc------------------------CCCCceecCCChHHHHHHHHHHcCC---Cceeee
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA------------------------ESPAFKKAPGGAPANVAVGIARLGG---SSAFIG 114 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~------------------------~~~~~~~~~GG~~~N~A~~larLG~---~~~~i~ 114 (400)
-.+.+|+.++|+...++...+. +....+..+||+.-|.++.+++++- .+.++|
T Consensus 8 il~G~gnpLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~~~E~~~~~~~~~~AGGs~qNt~R~aq~~~~~p~~~~f~G 87 (343)
T KOG2854|consen 8 ILVGLGNPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGLFDELMEGFNVKYSAGGSAQNTLRIAQWLLQQPGATVFFG 87 (343)
T ss_pred eeeccCccceeeeeccCHHHHHHcCCCCCcceecchhhHHHHHHHhhcccEEecCCchhHHHHHHHHHHccCCCceEEEe
Confidence 4677999999999888733211 2346788999999999999999987 799999
Q ss_pred cccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCC
Q 015777 115 KTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQ 194 (400)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~ 194 (400)
. ||+|.+|+++.+.+++.||+..+- ..++.+|++|.++++.++ |++.-+ .++...++
T Consensus 88 s-------------------vG~Dk~ge~l~~~~~~aGv~~~yq-~~~d~~TGtCavli~~~n-RSL~an--LgAAn~f~ 144 (343)
T KOG2854|consen 88 S-------------------VGKDKFGELLKSKARAAGVNVHYQ-VKEDGPTGTCAVLITGDN-RSLCAN--LGAANCFK 144 (343)
T ss_pred e-------------------ccCchHHHHHHHHHHhcCceEEEE-eccCCCCceEEEEEeCCC-cchhhc--cchhhccC
Confidence 9 999999999999999999999865 567779999999998777 776654 56666777
Q ss_pred ccccc----hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 195 EAELD----LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 195 ~~~l~----~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
.++++ +..++++.+++++++.+. .+++++..+.+.+.+.+.+..++.+-.. ......+.+.++++++|++
T Consensus 145 ~dhl~~~~~~~lveka~v~yv~Gfflt--v~p~ai~~v~qh~~e~~r~~~lnlsapf----I~q~~~~~l~~v~~y~Dii 218 (343)
T KOG2854|consen 145 VDHLDKEENWALVEKAKVFYVAGFFLT--VSPDAIRKVAQHAAENNRVFTLNLSAPF----ISQFFKDALDKVLPYADII 218 (343)
T ss_pred HHHhcchhhhhhhhheeEEEEEEEEEE--eChHHHHHHHHHHHHhcchhheeccchh----HHHHHHHHHHhhcCcceEE
Confidence 77774 357899999999998653 3467888888889888887777664321 2456678888899999999
Q ss_pred EcCHhHHhcccCCCC---CcHHHHHHHHH------hCCCcEEEEEecCCcEEEEeCCceEEEccccc---cccCCCCchH
Q 015777 271 KISEEEISFLTQGED---PYDDAVVYKLF------HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDATGAGD 338 (400)
Q Consensus 271 ~~N~~E~~~l~~~~~---~~~~~~~~~l~------~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v---~vvDttGAGD 338 (400)
+.|++|++.+..... .+..+....+. ....+.++||.|.+++++...++...+|..+. +++||+||||
T Consensus 219 fgNe~EA~af~~~~~~~t~dv~eia~~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGD 298 (343)
T KOG2854|consen 219 FGNEDEAAAFARAHGWETKDVKEIALKLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGD 298 (343)
T ss_pred EcCHHHHHHHHHhhCCcccchHHHhhHhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchH
Confidence 999999999976542 22222222221 23578899999999999999887766665544 6999999999
Q ss_pred HHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCC
Q 015777 339 AFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPT 387 (400)
Q Consensus 339 aF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~ 387 (400)
+|++||+++|.+|.+ +++|++.|+.+|+..+...|. .+|+
T Consensus 299 aFvgGFl~~l~qg~~-------l~~cir~g~~aa~~vi~~~G~--~~p~ 338 (343)
T KOG2854|consen 299 AFVGGFLSQLVQGKS-------LEECIRAGSYAASHVIRRVGC--TVPE 338 (343)
T ss_pred HHHHHHHHHHHcCCC-------HHHHHHHHHHHhhheeeccCC--CCCC
Confidence 999999999999999 999999999999999999996 3454
No 47
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.97 E-value=6.9e-30 Score=242.57 Aligned_cols=289 Identities=22% Similarity=0.252 Sum_probs=228.6
Q ss_pred CCCcEEEEccceeecccCcCC------CCc--cCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeecc
Q 015777 59 ESPLVVCFGEMLIDFVPTVSG------LSL--AESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL 130 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~------~~~--~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~ 130 (400)
.+.+|+|+|+.++|.+...+- .|. ........++||+ +|+|.+++.||.++.++|.
T Consensus 9 ~~~kVLVvGDvmLDrY~~G~~~RISPEAPVPVv~v~~e~~rlGGA-aNVa~NiasLGa~a~l~Gv--------------- 72 (467)
T COG2870 9 KQAKVLVVGDVMLDRYWYGKVSRISPEAPVPVVKVEKEEERLGGA-ANVAKNIASLGANAYLVGV--------------- 72 (467)
T ss_pred cCCcEEEEcceeeeeeccccccccCCCCCCceEEecccccccccH-HHHHHHHHHcCCCEEEEEe---------------
Confidence 456899999999999876542 222 2566778899996 7999999999999999999
Q ss_pred CCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc---hhhcCCcc
Q 015777 131 PCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD---LSLITKAK 207 (400)
Q Consensus 131 ~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~---~~~i~~~~ 207 (400)
+|+|+.|+.+.+.|+..+|+.. +..+++.+|.....++..+.+-.-+.+.. ... ......+- .+.+++.|
T Consensus 73 ----vG~Deag~~L~~~l~~~~i~~~-l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee-~~~-~~~~~~ll~~~~~~l~~~~ 145 (467)
T COG2870 73 ----VGKDEAGKALIELLKANGIDSD-LLRDKNRPTIVKLRVLSRNQQLLRLDFEE-KFP-IEDENKLLEKIKNALKSFD 145 (467)
T ss_pred ----eccchhHHHHHHHHHhcCcccc-eEeecCCCceeeeeeecccceEEEecccc-cCc-chhHHHHHHHHHHHhhcCC
Confidence 9999999999999999999955 55678889988888876544332222211 111 11111111 25678999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc
Q 015777 208 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY 287 (400)
Q Consensus 208 ~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~ 287 (400)
+++++.|.-..-. ....+++.|++.|++|.+||.+.. .+.+..+..++||..|++...|....+
T Consensus 146 ~vVLSDY~KG~L~---~~q~~I~~ar~~~~pVLvDPKg~D-------------f~~Y~GAtLiTPN~~E~~~~vg~~~~e 209 (467)
T COG2870 146 ALVLSDYAKGVLT---NVQKMIDLAREAGIPVLVDPKGKD-------------FEKYRGATLITPNLKEFEEAVGKCKSE 209 (467)
T ss_pred EEEEeccccccch---hHHHHHHHHHHcCCcEEECCCCcc-------------hhhhCCCeecCCCHHHHHHHHcccccH
Confidence 9999988754322 256788899999999999996421 124568999999999999999988764
Q ss_pred HH--HHHHHHH-hCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 288 DD--AVVYKLF-HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 288 ~~--~~~~~l~-~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
.+ +..++|. +.+...++||++++|..++..++..|+|+...++.|.|||||+-+|.|..+++.|.+ +++|
T Consensus 210 ~el~~~g~kL~~~~~L~alLvTRsE~GMtL~~~~~~~h~pt~AkEVyDVTGAGDTVIa~la~~laaG~s-------~~eA 282 (467)
T COG2870 210 EELEERGQKLKEELDLSALLVTRSEKGMTLFQEGKPLHFPARAKEVYDVTGAGDTVIAVLAAALAAGAS-------LEEA 282 (467)
T ss_pred HHHHHHHHHHHHhhCcceEEEEeccCCceeecCCcccccchhheeeeeccCCCchHHHHHHHHHHcCCC-------HHHH
Confidence 31 2234444 468899999999999999998888999999889999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
+.+||++|++.+...|+. ..+.+||.+.+
T Consensus 283 c~lAN~AagiVVgKlGTa--tvs~~EL~nAV 311 (467)
T COG2870 283 CELANAAAGIVVGKLGTA--TVSPEELEMAV 311 (467)
T ss_pred HHHhhhhcceEEeeccce--eecHHHHHhhh
Confidence 999999999999999984 47889888743
No 48
>KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.7e-28 Score=218.24 Aligned_cols=281 Identities=18% Similarity=0.264 Sum_probs=217.2
Q ss_pred CCCCcEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
.+++.|+|+|.+.+|++..++..|.+. ..+-.++.||.+.|++.+|++||.++.|+|.
T Consensus 2 ~~~k~VLcVG~~~lD~iTivd~~~fe~~~~r~~~g~wqRgG~asNvcTvlrlLG~~cef~Gv------------------ 63 (308)
T KOG2947|consen 2 EEPKQVLCVGCTVLDVITIVDKYPFEDSEIRCLSGRWQRGGNASNVCTVLRLLGAPCEFFGV------------------ 63 (308)
T ss_pred CCcceEEEeccEEEEEEEeccCCCCCccceehhhhhhhcCCCcchHHHHHHHhCCchheeee------------------
Confidence 445689999999999999999888763 4556789999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGS 213 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~ 213 (400)
+.....-+++++.|++.|||++++......+.-..+|.-...|.|+++++ .......+.+++..-.+.+..|+|+..
T Consensus 64 -lsr~~~f~~lLddl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~--dks~p~vT~~dF~kvdl~qy~WihfE~ 140 (308)
T KOG2947|consen 64 -LSRGHVFRFLLDDLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYC--DKSLPDVTATDFEKVDLTQYGWIHFEA 140 (308)
T ss_pred -cccchhHHHHHHHHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEe--cCCCccccHHHhhhcccceeeeEEEec
Confidence 99888889999999999999999998877555555555557789999987 445566788888766788999999987
Q ss_pred ccccCchhHHHHHHHHHHHh----hCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHH
Q 015777 214 ISLITEPCKSAHIAAAKAAK----DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDD 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~----~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~ 289 (400)
..... ..+.+..+.+.=. +.+|.+++|.- ..++...++...+|+++.+++-++.+.-... .
T Consensus 141 Rnp~e--tlkM~~~I~~~N~r~pe~qrI~vSvd~e----------n~req~~~l~am~DyVf~sK~~a~~~gfks~---r 205 (308)
T KOG2947|consen 141 RNPSE--TLKMLQRIDAHNTRQPEEQRIRVSVDVE----------NPREQLFQLFAMCDYVFVSKDVAKHLGFKSP---R 205 (308)
T ss_pred CChHH--HHHHHHHHHHhhcCCCccceEEEEEEec----------CcHHHHHHHhhcccEEEEEHHHHhhhccCCH---H
Confidence 53211 1122222222111 13577888863 2356667788999999999999887755443 3
Q ss_pred HHHHHHHhC-----CCcEEEEEecCCcEEEEeC-CceEEEccccc-cccCCCCchHHHHHHHHHHHH-cCCccccchHHH
Q 015777 290 AVVYKLFHA-----NLKLLLVTEGPDGCRYYTK-DFSGRVQGLKV-EAVDATGAGDAFVAGILSQLS-TDFSLLQKEDQL 361 (400)
Q Consensus 290 ~~~~~l~~~-----g~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~-~g~~~~~~~~~l 361 (400)
++...+..+ ....+|+-++++|+-.... |+.+++++.+- ++||+.|+||+|.|||+|+++ ++.+ +
T Consensus 206 ea~~~l~~r~~~~~pkpv~I~~w~~eGA~~l~adg~yfev~a~~ppkvVD~lg~~DtF~A~vIyA~lk~~r~-------l 278 (308)
T KOG2947|consen 206 EACEGLYGRVPKGKPKPVLICPWASEGAGALGADGKYFEVDAFKPPKVVDTLGAGDTFNAGVIYALLKQGRS-------L 278 (308)
T ss_pred HHHHHHHhhcccCCCCcEEEeccccccccccCCCCCEEecCCCCCccceeeccCCCcchHHHHHHHHHhhhh-------H
Confidence 444444322 2356788899999877764 46778888865 899999999999999999955 5677 9
Q ss_pred HHHHHHHHHHHHHHhcccCC
Q 015777 362 RDALRFANACGALTVMERGA 381 (400)
Q Consensus 362 ~~al~~A~a~Aa~~v~~~G~ 381 (400)
.||++||+++|+.++...|-
T Consensus 279 ~eAvdfg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 279 AEAVDFGNRVASKKLGGQGF 298 (308)
T ss_pred HHHHHHHHHhhhcccccccc
Confidence 99999999999999999884
No 49
>cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).
Probab=99.96 E-value=2.5e-27 Score=213.54 Aligned_cols=188 Identities=31% Similarity=0.407 Sum_probs=157.1
Q ss_pred cEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+++|++++|.+..+++.|.. +.......+||.+.|+|.+|++||.++.++ |
T Consensus 1 ~v~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~LG~~~~~~----------------------~- 57 (196)
T cd00287 1 RVLVVGSLLVDVILRVDALPLPGGLVRPGDTEERAGGGAANVAVALARLGVSVTLV----------------------G- 57 (196)
T ss_pred CEEEEccceEEEEEEeccCCCCCCeEEeceeeecCCCcHHHHHHHHHHCCCcEEEE----------------------E-
Confidence 4899999999999999887765 355678899999999999999999988874 3
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
+|++|+++....
T Consensus 58 --------------------------------------------------------------------~~~v~i~~~~~~ 69 (196)
T cd00287 58 --------------------------------------------------------------------ADAVVISGLSPA 69 (196)
T ss_pred --------------------------------------------------------------------ccEEEEecccCc
Confidence 788888775422
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYK 294 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~ 294 (400)
.+...++++.+++.|+++++|++.+...|.. ..+.++++++|++++|++|++.+++....+. .+.++.
T Consensus 70 ----~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~-----~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~~~~ 140 (196)
T cd00287 70 ----PEAVLDALEEARRRGVPVVLDPGPRAVRLDG-----EELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAAL 140 (196)
T ss_pred ----HHHHHHHHHHHHHcCCeEEEeCCcccccccc-----chHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHHHHH
Confidence 3567788889999999999999876554432 1156678899999999999999999765542 245677
Q ss_pred HHhCCCcEEEEEecCCcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHH
Q 015777 295 LFHANLKLLLVTEGPDGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 349 (400)
Q Consensus 295 l~~~g~~~vvvT~G~~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 349 (400)
+.+.+++.+++|+|++|+++++ +++.+++|+++++++||+||||+|+|||+++++
T Consensus 141 l~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 141 LLSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPVKVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred HHhcCCCEEEEEECCCccEEEecCCceEEcCCccCCcccCCCchHHHHHHHHHHhC
Confidence 8889999999999999999999 777888998888999999999999999999874
No 50
>PRK12413 phosphomethylpyrimidine kinase; Provisional
Probab=99.81 E-value=1e-18 Score=164.57 Aligned_cols=150 Identities=17% Similarity=0.152 Sum_probs=118.9
Q ss_pred HHHHHHHHHHh-hCCCeEEEeCCCCCCCCC--ChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---HHHHHHHH
Q 015777 223 SAHIAAAKAAK-DAGVVLSYDPNLRLPLWP--SADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---DAVVYKLF 296 (400)
Q Consensus 223 ~~~~~~~~~a~-~~g~~v~~D~~~~~~~~~--~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~~~~~~l~ 296 (400)
+....+++.++ +.++++++||+.+...|. ..+.+.+.++++++++|++++|++|++.|+|.+..+. .+.++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~g~~~~~~~~~~~~a~~l~ 162 (253)
T PRK12413 83 EIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLSGKEIKTLEDMKEAAKKLY 162 (253)
T ss_pred HHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHhCcCCCCHHHHHHHHHHHH
Confidence 34455555555 468999999999988883 4556667777789999999999999999999765433 35567888
Q ss_pred hCCCcEEEEEecCCcE-----EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGC-----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~-----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+.|++.|+||.|++|+ .++..++..+++..++..+|++||||+|.|+|+++|++|++ +++|+++|.++
T Consensus 163 ~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGDaf~a~~~~~l~~g~~-------l~ea~~~A~~~ 235 (253)
T PRK12413 163 DLGAKAVVIKGGNRLSQKKAIDLFYDGKEFVILESPVLEKNNIGAGCTFASSIASQLVKGKS-------PLEAVKNSKDF 235 (253)
T ss_pred HcCCCEEEEeCCCCCCCCcceEEEEcCCEEEEEeecccCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 8999999999998742 23334444556667778899999999999999999999999 99999999998
Q ss_pred HHHHhccc
Q 015777 372 GALTVMER 379 (400)
Q Consensus 372 Aa~~v~~~ 379 (400)
....+...
T Consensus 236 ~~~~l~~~ 243 (253)
T PRK12413 236 VYQAIQQS 243 (253)
T ss_pred HHHHHHHH
Confidence 88777653
No 51
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.
Probab=99.80 E-value=1.5e-18 Score=163.45 Aligned_cols=165 Identities=22% Similarity=0.107 Sum_probs=128.7
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhC--CCeEEEeCCCCC--CCCCChHHHHHhHHhhhc-cCcEEEcCHhHHh
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDA--GVVLSYDPNLRL--PLWPSADKAREGILSIWE-TADIIKISEEEIS 278 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~~~~--~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~ 278 (400)
...+.+..+.+ ......+.+.++++.++++ ++++++||+.+. .+|...+...+.+.+++. ++|++++|.+|++
T Consensus 71 ~~~~~v~~G~l--~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~ 148 (254)
T cd01173 71 LEYDAVLTGYL--GSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELE 148 (254)
T ss_pred ccCCEEEEecC--CCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHH
Confidence 45677765543 2344567788888888877 899999997533 444333455666777666 9999999999999
Q ss_pred cccCCCCCcH---HHHHHHHHhCCCcEEEEEecCC------cEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHH
Q 015777 279 FLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD------GCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQL 348 (400)
Q Consensus 279 ~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~------G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l 348 (400)
.|+|.+..+. .+.++++.++|++.|+||.|.. |++++.+++.++++.++++ ++|++||||+|.|+|+++|
T Consensus 149 ~l~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~~~~~l 228 (254)
T cd01173 149 LLTGKKINDLEDAKAAARALHAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKIPFPAYFNGTGDLFAALLLARL 228 (254)
T ss_pred HHcCCCcCCHHHHHHHHHHHHHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeeccCCCCCcCChHHHHHHHHHHHH
Confidence 9999765432 4566788889999999999985 7888877665555555555 7999999999999999999
Q ss_pred HcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 349 STDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 349 ~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
++|++ +++|+++|++.....+.
T Consensus 229 ~~g~~-------~~~a~~~A~~~~~~~i~ 250 (254)
T cd01173 229 LKGKS-------LAEALEKALNFVHEVLE 250 (254)
T ss_pred HcCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999 99999999998776664
No 52
>PRK05756 pyridoxamine kinase; Validated
Probab=99.78 E-value=6.3e-18 Score=162.05 Aligned_cols=167 Identities=21% Similarity=0.114 Sum_probs=129.2
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCCCCCC---CCCChHHHHHhHHhhhccCcEEEcCHhHH
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEI 277 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~---~~~~~~~~~~~~~~ll~~~dvl~~N~~E~ 277 (400)
+...+.+..|.+ ......+.+.++++.+++.+ +.+++||+.+.. .|...+......+.+++++|++++|..|+
T Consensus 72 l~~~~~v~~G~l--~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea 149 (286)
T PRK05756 72 LGECDAVLSGYL--GSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFEL 149 (286)
T ss_pred cccCCEEEECCC--CCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHH
Confidence 457787766543 34445667788888887765 568999987652 33333333334445889999999999999
Q ss_pred hcccCCCCCcH---HHHHHHHHhCCCcEEEEEecCC--------cEEEEeCCceEEEccccccc-cCCCCchHHHHHHHH
Q 015777 278 SFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD--------GCRYYTKDFSGRVQGLKVEA-VDATGAGDAFVAGIL 345 (400)
Q Consensus 278 ~~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~--------G~~~~~~~~~~~vpa~~v~v-vDttGAGDaF~Agfl 345 (400)
+.|+|....+. .+.++++++.|++.|+||.|.. |++++++++.++++.++++. +|++||||+|.|+|+
T Consensus 150 ~~L~g~~~~~~~~~~~~~~~l~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~~GaGD~f~a~~~ 229 (286)
T PRK05756 150 EWLSGRPVETLEDAVAAARALIARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLVDFMRQPVGVGDLTSALFL 229 (286)
T ss_pred HHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCccCCCCCCCChHHHHHHHHH
Confidence 99999764433 3455678888999999999876 57777777777777777777 799999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+++++|++ +++|+++|++.....+..
T Consensus 230 a~l~~g~~-------~~~al~~A~~~~~~~i~~ 255 (286)
T PRK05756 230 ARLLQGGS-------LEEALEHTTAAVYEVMAR 255 (286)
T ss_pred HHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999998887765
No 53
>PRK12412 pyridoxal kinase; Reviewed
Probab=99.78 E-value=1.4e-17 Score=158.08 Aligned_cols=161 Identities=13% Similarity=0.084 Sum_probs=124.5
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCe-EEEeCCCCCCCC---CChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRLPLW---PSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~~~---~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
.+.+.++-+ .+.+.+..+.+.+++.+.+ +++||....... ...+......+++++++|+++||+.|++.|+
T Consensus 73 ~~~ikiG~l-----~~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~ 147 (268)
T PRK12412 73 VDALKTGML-----GSVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLS 147 (268)
T ss_pred CCEEEECCC-----CCHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHh
Confidence 788887754 2356777788888888876 999997533211 0112222334458899999999999999999
Q ss_pred CCCCCc---HHHHHHHHHhCCCcEEEEEecCCcE------EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 282 QGEDPY---DDAVVYKLFHANLKLLLVTEGPDGC------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 282 ~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~G~------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
|....+ ..+++++++++|++.|+||.|++|+ +++.++..++++.++++.+|++||||+|.|+|+++|++|+
T Consensus 148 g~~~~~~~~~~~aa~~l~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v~~~~t~GaGD~f~aa~aa~l~~g~ 227 (268)
T PRK12412 148 GVKINSLEDMKEAAKKIHALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKIDTTNTHGAGCTYSAAITAELAKGK 227 (268)
T ss_pred CcCCCCHHHHHHHHHHHHhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCccCCCCCCchHHHHHHHHHHHHHCCC
Confidence 975443 2355678888999999999999764 3455555567888889999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+ +++|+++|.++....+..
T Consensus 228 ~-------l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 228 P-------VKEAVKTAKEFITAAIRY 246 (268)
T ss_pred C-------HHHHHHHHHHHHHHHHHH
Confidence 9 999999999999887775
No 54
>TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase. This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species.
Probab=99.77 E-value=2e-17 Score=155.80 Aligned_cols=161 Identities=17% Similarity=0.150 Sum_probs=126.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCC-eEEEeCCCCCC----CCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRLP----LWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~-~v~~D~~~~~~----~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.+.+.+|-+ .+.+.+..+++.+++.+. ++++||..+.. ++ +.+......+++++++|++++|..|++.
T Consensus 67 ~~~aikiG~l-----~~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~-~~~~~~~~~~~ll~~~dvitpN~~Ea~~ 140 (254)
T TIGR00097 67 PVDAAKTGML-----ASAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLL-EEEAIEALRKRLLPLATLITPNLPEAEA 140 (254)
T ss_pred CCCEEEECCc-----CCHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCC-CHHHHHHHHHhccccccEecCCHHHHHH
Confidence 4577777643 234677788888888888 69999975432 22 2222223334578999999999999999
Q ss_pred ccCCCCCcH---HHHHHHHHhCCCcEEEEEecC----CcE-EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC
Q 015777 280 LTQGEDPYD---DAVVYKLFHANLKLLLVTEGP----DGC-RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 351 (400)
Q Consensus 280 l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~----~G~-~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g 351 (400)
|++....+. .+.++.+.+.|++.|+||.|+ +|. +++.+++.++++.++++.+|++||||+|.|+|+++|++|
T Consensus 141 L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~aalaa~la~g 220 (254)
T TIGR00097 141 LLGTKIRTEQDMIKAAKKLRELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRIETKNTHGTGCTLSAAIAANLAKG 220 (254)
T ss_pred HhCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEecccCCCCCCChHHHHHHHHHHHHHCC
Confidence 999754332 355678888999999999997 344 556777677888888999999999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 352 FSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 352 ~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++ +++|+++|++++...+..
T Consensus 221 ~~-------l~eA~~~A~~~~~~~i~~ 240 (254)
T TIGR00097 221 LS-------LKEAVKEAKEFVTGAIRY 240 (254)
T ss_pred CC-------HHHHHHHHHHHHHHHHHH
Confidence 99 999999999999998875
No 55
>TIGR00687 pyridox_kin pyridoxal kinase. ThiD and related proteins form an outgroup.
Probab=99.77 E-value=1.5e-17 Score=159.44 Aligned_cols=161 Identities=19% Similarity=0.175 Sum_probs=122.0
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCCCCCC---CCCChHHHHHhH-HhhhccCcEEEcCHh
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRLP---LWPSADKAREGI-LSIWETADIIKISEE 275 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~~---~~~~~~~~~~~~-~~ll~~~dvl~~N~~ 275 (400)
.+.++|+++.|.+. .....+.+.++++.+++.+ +.+++||..+.. .|.. +.+.+.+ .++++++|++++|..
T Consensus 71 ~~~~~d~v~~G~l~--~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~-~~~~~~~~~~ll~~adii~pN~~ 147 (286)
T TIGR00687 71 KLNQCDAVLSGYLG--SAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVA-PDLLEVYREKAIPVADIITPNQF 147 (286)
T ss_pred ccccCCEEEECCCC--CHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeC-hhHHHHHHHhccccccEecCCHH
Confidence 34588988766543 3334567778888888765 678999965432 2222 3344444 358899999999999
Q ss_pred HHhcccCCCCCcHH---HHHHHHHhCCCcEEEEE-ecCCcE--------EEEeCCceEEEcccccc-ccCCCCchHHHHH
Q 015777 276 EISFLTQGEDPYDD---AVVYKLFHANLKLLLVT-EGPDGC--------RYYTKDFSGRVQGLKVE-AVDATGAGDAFVA 342 (400)
Q Consensus 276 E~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvT-~G~~G~--------~~~~~~~~~~vpa~~v~-vvDttGAGDaF~A 342 (400)
|++.|+|.+..+.+ ++++.+++.|++.|+|| .|.+|+ +++.+++.++.+.++++ ++|++||||+|+|
T Consensus 148 Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~GaGD~f~A 227 (286)
T TIGR00687 148 ELELLTGRKINTVEEALAAADALIAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLAVFMRQPVGTGDLIAA 227 (286)
T ss_pred HHHHHhCCCcCCHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCcCCCCCCCChHHHHHH
Confidence 99999997654333 44677888899999999 688875 44555666677766777 6999999999999
Q ss_pred HHHHHHHcCCccccchHHHHHHHHHHHHHH
Q 015777 343 GILSQLSTDFSLLQKEDQLRDALRFANACG 372 (400)
Q Consensus 343 gfl~~l~~g~~~~~~~~~l~~al~~A~a~A 372 (400)
+|++++++|++ +++|+++|+++.
T Consensus 228 ~~l~~l~~g~~-------~~~al~~A~~~v 250 (286)
T TIGR00687 228 LLLATLLHGNS-------LKEALEKTVSAV 250 (286)
T ss_pred HHHHHHhcCCC-------HHHHHHHHHHHH
Confidence 99999999999 999999999993
No 56
>cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.
Probab=99.77 E-value=3.9e-17 Score=152.53 Aligned_cols=161 Identities=18% Similarity=0.149 Sum_probs=124.6
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhC-CCeEEEeCCCCCCCCC---ChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLPLWP---SADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~-g~~v~~D~~~~~~~~~---~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.+.+.+|-+. +.+....+.+.+++. ++++++||+.+...+. +.+........+++++|++++|..|++.|
T Consensus 68 ~~~~i~~G~l~-----~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L 142 (242)
T cd01169 68 PVDAIKIGMLG-----SAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELL 142 (242)
T ss_pred CCCEEEECCCC-----CHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHH
Confidence 57888876432 245666677777775 8899999986543221 12222333445679999999999999999
Q ss_pred cCCCCCcH---HHHHHHHHhCCCcEEEEEecCCc-----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 281 TQGEDPYD---DAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 281 ~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G-----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
+|....+. .+.++.+.++|++.|+||.|++| .+++.+++.++++.++++++|++|+||+|.|+|++++++|.
T Consensus 143 ~g~~~~~~~~~~~~~~~l~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~a~l~~g~ 222 (242)
T cd01169 143 TGLEIATEEDMMKAAKALLALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRIDTKNTHGTGCTLSSAIAANLAKGL 222 (242)
T ss_pred hCCCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCCCceeEEEEECCcEEEEecceeCCCCCCChHHHHHHHHHHHHHCCC
Confidence 99765432 34567788899999999999985 36677777788898888899999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+ +++|+++|++.-...+.
T Consensus 223 ~-------~~~A~~~A~~~~~~~i~ 240 (242)
T cd01169 223 S-------LEEAVREAKEYVTQAIR 240 (242)
T ss_pred C-------HHHHHHHHHHHHHHHHH
Confidence 9 99999999988776654
No 57
>PRK07105 pyridoxamine kinase; Validated
Probab=99.76 E-value=1.3e-17 Score=159.71 Aligned_cols=165 Identities=20% Similarity=0.178 Sum_probs=124.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC--CCCCC-hHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL--PLWPS-ADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--~~~~~-~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
++|.+++|.+. .....+.+.++++.+++.++++++||+.+. .+|.. .+...+.++++++++|++++|+.|++.|+
T Consensus 75 ~~~aik~G~l~--~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~ 152 (284)
T PRK07105 75 KFDAIYSGYLG--SPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLLL 152 (284)
T ss_pred ccCEEEECcCC--CHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHHc
Confidence 67888877542 222344555556666667899999998543 24431 23455667789999999999999999999
Q ss_pred CCCCC----cH---HHHHHHHHhCCCcEEEEEe-----cCCcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 282 QGEDP----YD---DAVVYKLFHANLKLLLVTE-----GPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 282 ~~~~~----~~---~~~~~~l~~~g~~~vvvT~-----G~~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
|.... +. .++++++.+.|++.|+||. |..|+++++++ ..++.+.+.++ +|++||||+|.|+|+++
T Consensus 153 g~~~~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~aa~~~~ 231 (284)
T PRK07105 153 DKPYLEKSYSEEEIKQLLRKLADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKYIP-AHYPGTGDIFTSVITGS 231 (284)
T ss_pred CCCcCcCCCCHHHHHHHHHHHHhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeecccC-CCcCChhHHHHHHHHHH
Confidence 97532 12 3456777888999999999 67788888753 34445544444 89999999999999999
Q ss_pred HHcCCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 348 LSTDFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 348 l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
+++|++ +++|+++|+++....+...
T Consensus 232 l~~g~~-------l~~av~~A~~~~~~~i~~~ 256 (284)
T PRK07105 232 LLQGDS-------LPIALDRAVQFIEKGIRAT 256 (284)
T ss_pred HhCCCC-------HHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999888754
No 58
>PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed
Probab=99.76 E-value=3.7e-17 Score=155.05 Aligned_cols=161 Identities=19% Similarity=0.179 Sum_probs=125.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCC-eEEEeCCCCCC----CCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRLP----LWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~-~v~~D~~~~~~----~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.+.+.++.+. +.+....+.+.+++.+. ++++||..+.. +| ..+......+++++++|+++||..|++.
T Consensus 73 ~~~ai~iG~l~-----~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~-~~~~~~~~~~~ll~~~dvitpN~~Ea~~ 146 (266)
T PRK06427 73 RIDAVKIGMLA-----SAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLL-ADDAVAALRERLLPLATLITPNLPEAEA 146 (266)
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCC-CHHHHHHHHHhhhCcCeEEcCCHHHHHH
Confidence 56778777532 24566677777887775 89999975432 22 2222223334588999999999999999
Q ss_pred ccCCCCCc----HHHHHHHHHhCCCcEEEEEecC--CcE----EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH
Q 015777 280 LTQGEDPY----DDAVVYKLFHANLKLLLVTEGP--DGC----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 349 (400)
Q Consensus 280 l~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~--~G~----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 349 (400)
|+|.+..+ ..++++++.++|++.|+||.|+ +|. +++.+++.++++.++++.+|++|+||+|.|+|+++++
T Consensus 147 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~GaGD~f~a~l~~~l~ 226 (266)
T PRK06427 147 LTGLPIADTEDEMKAAARALHALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRIPTKNTHGTGCTLSAAIAAELA 226 (266)
T ss_pred HhCCCCCCcHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeECCCCCCChHHHHHHHHHHHHH
Confidence 99975332 2356678888999999999998 554 5666666778888888899999999999999999999
Q ss_pred cCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 350 TDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 350 ~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+|.+ +++|+++|++.+...+..
T Consensus 227 ~g~~-------l~~A~~~A~~~~~~~i~~ 248 (266)
T PRK06427 227 KGAS-------LLDAVQTAKDYVTRAIRH 248 (266)
T ss_pred CCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999988876
No 59
>PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed
Probab=99.73 E-value=1.2e-16 Score=152.75 Aligned_cols=165 Identities=19% Similarity=0.147 Sum_probs=121.7
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhh--CCCeEEEeCCCCC---CCCCChHHHHHhHH-hhhccCcEEEcCHhH
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL---PLWPSADKAREGIL-SIWETADIIKISEEE 276 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~~-~ll~~~dvl~~N~~E 276 (400)
+.++|.+++|.+. .....+.+.+.++..+. .+.++++||.... .+|.+.+. .+.++ .+++++|+++||+.|
T Consensus 86 l~~~d~i~~G~l~--s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~-~~~~~~~Ll~~advitPN~~E 162 (281)
T PRK08176 86 LRQLRAVTTGYMG--SASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDL-PEAYRQHLLPLAQGLTPNIFE 162 (281)
T ss_pred cccCCEEEECCCC--CHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccH-HHHHHHHhHhhcCEeCCCHHH
Confidence 4578999887653 33333455555554443 4788999997443 24433332 33444 588999999999999
Q ss_pred HhcccCCCCCcHH---HHHHHHHhCCCcEEEEEecCCc-------EEEEeCCceEEEccccccccCCCCchHHHHHHHHH
Q 015777 277 ISFLTQGEDPYDD---AVVYKLFHANLKLLLVTEGPDG-------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 277 ~~~l~~~~~~~~~---~~~~~l~~~g~~~vvvT~G~~G-------~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
++.|+|.+..+.+ ++++++++.|++.|+||.|+.| ++++++++.+ ....+...+|++||||+|.|+|++
T Consensus 163 a~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~GaGD~faa~~~a 241 (281)
T PRK08176 163 LEILTGKPCRTLDSAIAAAKSLLSDTLKWVVITSAAGNEENQEMQVVVVTADSVN-VISHPRVDTDLKGTGDLFCAELVS 241 (281)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHhcCCCEEEEeeccCCCCCCcEEEEEEeCCceE-EEecCccCCCCCChhHHHHHHHHH
Confidence 9999997644333 4567888899999999999998 5667766544 344455568999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 347 QLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 347 ~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++++|.+ +++|+++|+..-...+..
T Consensus 242 ~l~~g~~-------l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 242 GLLKGKA-------LTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999887766654
No 60
>PRK08573 phosphomethylpyrimidine kinase; Provisional
Probab=99.73 E-value=1.8e-16 Score=160.89 Aligned_cols=159 Identities=19% Similarity=0.199 Sum_probs=124.6
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC----CCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
.+.+..+.+. +.+.+..+++.+++.++++++||+.+. .+|. .+.......++++++|++++|+.|++.|+
T Consensus 72 ~~~ik~G~l~-----~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~-~~~~~~l~~~llp~adli~pN~~Ea~~L~ 145 (448)
T PRK08573 72 IDAAKTGMLS-----NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLR-EDAVDALIKRLLPLATVVTPNRPEAEKLT 145 (448)
T ss_pred CCEEEECCcC-----CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCC-HHHHHHHHHhhhccCEEEcCCHHHHHHHh
Confidence 3455555422 357788889999999999999998664 3442 22223334568899999999999999999
Q ss_pred CCCCCcH---HHHHHHHHh-CCCcEEEEEecC----CcE-EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 282 QGEDPYD---DAVVYKLFH-ANLKLLLVTEGP----DGC-RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 282 ~~~~~~~---~~~~~~l~~-~g~~~vvvT~G~----~G~-~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
|....+. .++++++.+ .|++.|+||.|. +|+ +++.+++.++++.++++++|++||||+|.|+|++++++|+
T Consensus 146 g~~i~~~~d~~~aa~~L~~~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v~~~dt~GAGDaFsAa~aa~l~~G~ 225 (448)
T PRK08573 146 GMKIRSVEDARKAAKYIVEELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRVESGCTHGTGCSFSAAIAAGLAKGL 225 (448)
T ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEecccCCCCceeEEEEECCeEEEEEecCcCCCCCCChHHHHHHHHHHHHHcCC
Confidence 9764432 345667764 799999999985 354 4456666678888888999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+ +++|+++|+.+....++
T Consensus 226 ~-------l~eAl~~A~~~~~~al~ 243 (448)
T PRK08573 226 D-------PEEAIKTAKKFITMAIK 243 (448)
T ss_pred C-------HHHHHHHHHHHHHHHHH
Confidence 9 99999999999999888
No 61
>PRK12616 pyridoxal kinase; Reviewed
Probab=99.70 E-value=8.8e-16 Score=145.94 Aligned_cols=162 Identities=16% Similarity=0.122 Sum_probs=122.2
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCC-CeEEEeCCCCCCCCC---ChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLPLWP---SADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~~~~---~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.+.+.+|-+ .+.+.+..+.+.+++.+ .++++||.....-.. ..+........+++.+|+++||..|++.|
T Consensus 74 ~~~aikiG~l-----~s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L 148 (270)
T PRK12616 74 GVDAMKTGML-----PTVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQL 148 (270)
T ss_pred CCCEEEECCC-----CCHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHH
Confidence 4577777654 23456677777777776 469999986432111 12222223334788999999999999999
Q ss_pred cCC-CCCcH---HHHHHHHHhCCCcEEEEEecCCcE------EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQG-EDPYD---DAVVYKLFHANLKLLLVTEGPDGC------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~-~~~~~---~~~~~~l~~~g~~~vvvT~G~~G~------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|. ...+. .++++++.+.|++.|+||.|.+|. +++.+++.++++.++++.+|++||||+|.|+|+++|++
T Consensus 149 ~g~~~~~~~~~~~~aa~~l~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~GaGD~fsaalaa~l~~ 228 (270)
T PRK12616 149 SGMGEIKTVEQMKEAAKKIHELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (270)
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeeeCCCCCCcHHHHHHHHHHHHHHC
Confidence 986 23322 355678888999999999998862 55666666677888888999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|.+ +++|+++|.......+..
T Consensus 229 g~~-------l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 229 GSE-------VKEAIYAAKEFITAAIKE 249 (270)
T ss_pred CCC-------HHHHHHHHHHHHHHHHHH
Confidence 999 999999999998877765
No 62
>PTZ00344 pyridoxal kinase; Provisional
Probab=99.61 E-value=4e-14 Score=136.37 Aligned_cols=162 Identities=18% Similarity=0.125 Sum_probs=115.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCCC--CCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNL--RLPLWPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~--~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.+++..|.++ .....+.+.++++.+++.+ +++++||+. +..+|. .+.+.+.++++++++|++++|++|++.|
T Consensus 77 ~~~~v~sG~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~-~~~~~~~~~~ll~~~dii~pN~~E~~~L 153 (296)
T PTZ00344 77 DYTYVLTGYIN--SADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYV-KEEVVDAYRELIPYADVITPNQFEASLL 153 (296)
T ss_pred cCCEEEECCCC--CHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEe-CHHHHHHHHHHhhhCCEEeCCHHHHHHH
Confidence 45677777654 2222334445555555555 589999854 445564 4567777888999999999999999999
Q ss_pred cCCCCCcH---HHHHHHHHhCCCcEEEEE---ecCCc----EEEEe--C----CceEEEccccccccCCCCchHHHHHHH
Q 015777 281 TQGEDPYD---DAVVYKLFHANLKLLLVT---EGPDG----CRYYT--K----DFSGRVQGLKVEAVDATGAGDAFVAGI 344 (400)
Q Consensus 281 ~~~~~~~~---~~~~~~l~~~g~~~vvvT---~G~~G----~~~~~--~----~~~~~vpa~~v~vvDttGAGDaF~Agf 344 (400)
+|.+..+. .+.++.+.+.|++.|+|| .|.+| +++.. . ++.+.+..++++ ++++|+||+|.|+|
T Consensus 154 ~g~~~~~~~~~~~~~~~l~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~GaGD~f~A~~ 232 (296)
T PTZ00344 154 SGVEVKDLSDALEAIDWFHEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYIE-GRYTGTGDLFAALL 232 (296)
T ss_pred hCCCCCCHHHHHHHHHHHHHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEeccccC-CCCCCchHHHHHHH
Confidence 99764333 245677878899999999 55566 44432 1 234555555555 57799999999999
Q ss_pred HHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 345 LSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 345 l~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++.+.+| + +++|+++|.+.-...+..
T Consensus 233 ~a~l~~g-~-------~~~a~~~A~a~~~~~i~~ 258 (296)
T PTZ00344 233 LAFSHQH-P-------MDLAVGKAMGVLQDIIKA 258 (296)
T ss_pred HHHHhcC-C-------HHHHHHHHHHHHHHHHHH
Confidence 9888887 8 999999998887766654
No 63
>PTZ00347 phosphomethylpyrimidine kinase; Provisional
Probab=99.56 E-value=8.2e-14 Score=143.67 Aligned_cols=159 Identities=18% Similarity=0.176 Sum_probs=115.6
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC----CCCCC--hHHHHHhHH-hhhccCcEEEcCHhHHh
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPS--ADKAREGIL-SIWETADIIKISEEEIS 278 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~--~~~~~~~~~-~ll~~~dvl~~N~~E~~ 278 (400)
.+.+.+|.+. +.+.+..+.+.++ ++++++||..+. .++.. .+...+.++ ++++.+|+++||..|++
T Consensus 300 ~~~Ik~G~l~-----s~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~ 372 (504)
T PTZ00347 300 ISVVKLGLVP-----TARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIPEAE 372 (504)
T ss_pred CCEEEECCcC-----CHHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHHHHH
Confidence 4555555432 2456666666664 678999997642 22221 111122333 57899999999999999
Q ss_pred cccCCC-CCc---HHHHHHHHHhCCCcEEEEEecCCc-------EEEEeC--CceEEEccccccccCCCCchHHHHHHHH
Q 015777 279 FLTQGE-DPY---DDAVVYKLFHANLKLLLVTEGPDG-------CRYYTK--DFSGRVQGLKVEAVDATGAGDAFVAGIL 345 (400)
Q Consensus 279 ~l~~~~-~~~---~~~~~~~l~~~g~~~vvvT~G~~G-------~~~~~~--~~~~~vpa~~v~vvDttGAGDaF~Agfl 345 (400)
.|+|.. ..+ ..++++.+.+.|++.|+||.|.+| .+++.+ ++.++++.++++++|++|+||+|.|+|+
T Consensus 373 ~L~g~~~~~~~~~~~~aa~~l~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~GaGD~fsaaia 452 (504)
T PTZ00347 373 RILGRKEITGVYEARAAAQALAQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRIATINTHGTGCTLASAIS 452 (504)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeECCCCCCChHHHHHHHHH
Confidence 999964 222 235567788899999999999963 344543 3456788888899999999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+++++|.+ +++|+++|.+.-...+..
T Consensus 453 a~la~G~~-------l~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 453 SFLARGYT-------VPDAVERAIGYVHEAIVR 478 (504)
T ss_pred HHHhCCCC-------HHHHHHHHHHHHHHHHHh
Confidence 99999999 999999998877766654
No 64
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase
Probab=99.55 E-value=1.3e-13 Score=142.23 Aligned_cols=162 Identities=15% Similarity=0.159 Sum_probs=122.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCe-EEEeCCCCCC---CCCChHHHHHhH-HhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRLP---LWPSADKAREGI-LSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~~---~~~~~~~~~~~~-~~ll~~~dvl~~N~~E~~~ 279 (400)
+.+.+.+|.+. +.+.+..+++.+++.+.+ +++||..... .+.+ +...+.+ .++++++|+++||..|++.
T Consensus 78 ~~~aik~G~l~-----~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~-~~~~~~l~~~Ll~~adiitPN~~Ea~~ 151 (502)
T PLN02898 78 PVDVVKTGMLP-----SAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAG-PSILSALREELLPLATIVTPNVKEASA 151 (502)
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCC-HHHHHHHHHhhhccCeEEcCCHHHHHH
Confidence 45677776542 256777788888887774 9999953221 1111 2223334 3578999999999999999
Q ss_pred ccCCCC-Cc---HHHHHHHHHhCCCcEEEEEecCCc------EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH
Q 015777 280 LTQGED-PY---DDAVVYKLFHANLKLLLVTEGPDG------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 349 (400)
Q Consensus 280 l~~~~~-~~---~~~~~~~l~~~g~~~vvvT~G~~G------~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 349 (400)
|+|... .+ ..+.++++.+.|++.|+||.|+.+ .+++++++.++++.++++.+|++|+||+|.|+|+++++
T Consensus 152 L~g~~~~~~~~~~~~~a~~l~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~t~GaGD~fsaaiaa~l~ 231 (502)
T PLN02898 152 LLGGDPLETVADMRSAAKELHKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRIKTRNTHGTGCTLASCIAAELA 231 (502)
T ss_pred HhCCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEecceeCCCCCCchhhhHHHHHHHHHH
Confidence 998532 12 235567888889999999999853 35566555667888888889999999999999999999
Q ss_pred cCCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 350 TDFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 350 ~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
+|++ +++|+++|+.+....+...
T Consensus 232 ~G~~-------l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 232 KGSD-------MLSAVKVAKRYVETALEYS 254 (502)
T ss_pred cCCC-------HHHHHHHHHHHHHHHHHhh
Confidence 9999 9999999999999888763
No 65
>KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only]
Probab=99.53 E-value=9.3e-14 Score=134.36 Aligned_cols=230 Identities=20% Similarity=0.260 Sum_probs=157.3
Q ss_pred EEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 64 VCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 64 ~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
+++|...+|+...++.-.+.+ .....+..||.+.|.|.++++||+++.+|+. ||+|.
T Consensus 344 v~vGa~i~D~~~k~d~d~K~dG~sy~~~~~Qa~GGVarN~A~a~~~lg~d~~liSa-------------------vG~d~ 404 (614)
T KOG3009|consen 344 VSVGATIVDFEAKTDEDVKDDGGSYNGQVVQAMGGVARNHADALARLGCDSVLISA-------------------VGDDN 404 (614)
T ss_pred eeecceEEEeEEeecccccccCCcccchhhhhccchhhhHHHHHHHhcCCeeEEEE-------------------eccCC
Confidence 999999999998887644432 3346789999999999999999999999999 99983
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
.|++.+.. + ...-+..++++ .++++.+++-
T Consensus 405 n~~~~~~~----------------------------------------~----~~~~e~~~dl~-~a~~I~~DsN----- 434 (614)
T KOG3009|consen 405 NGHFFRQN----------------------------------------S----HKIVESNEDLL-SADFILLDSN----- 434 (614)
T ss_pred cchhhhhh----------------------------------------h----hhhhhhhhhhh-cCCEEEEcCC-----
Confidence 11111100 0 01111222344 7888877653
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhHHhccc-CCCC---CcH----H-
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISFLT-QGED---PYD----D- 289 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E~~~l~-~~~~---~~~----~- 289 (400)
+....+.++++ ++.+.++|+|+|.. .......++-++ ..++.++||..|+-... +... ++. .
T Consensus 435 iS~~~Ma~il~-ak~~k~~V~fEPTd-------~~k~~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~~~~ 506 (614)
T KOG3009|consen 435 ISVPVMARILE-AKKHKKQVWFEPTD-------IDKVKKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPSVIQTADG 506 (614)
T ss_pred CCHHHHHHHHH-hhhccCceEecCCC-------chhhhhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChhhhccchH
Confidence 44567888888 99999999999953 223333333322 25899999999984222 1111 110 1
Q ss_pred --HHH---HHHHhCCCcEEEEEecCCcEEEEeCCc-----eEEEccccc--cccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 290 --AVV---YKLFHANLKLLLVTEGPDGCRYYTKDF-----SGRVQGLKV--EAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 290 --~~~---~~l~~~g~~~vvvT~G~~G~~~~~~~~-----~~~vpa~~v--~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
+.+ +.........+|+|.-.+|+++...+. ....|++.+ ++++..||||+|++||+.+++.+.+
T Consensus 507 ~~~~~~~~~~k~~~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~~~n~vsvsgaGdsf~~g~i~~l~~~~~---- 582 (614)
T KOG3009|consen 507 VLELIEKEKTKLLLNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQMNNVVSVSGAGDSFNSGVIAGLAHNKT---- 582 (614)
T ss_pred HHHHHHHHHHHhhcccceEEEEeccCceEEEecCCCCCcccccCCCcccccceeEeccCCcccccceeehhhcCcc----
Confidence 111 222334677899999999998877652 333444433 7999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhc
Q 015777 358 EDQLRDALRFANACGALTVM 377 (400)
Q Consensus 358 ~~~l~~al~~A~a~Aa~~v~ 377 (400)
+.+++.-+..++-...+
T Consensus 583 ---v~es~~gg~~~~ralls 599 (614)
T KOG3009|consen 583 ---VVESLQGGQECARALLS 599 (614)
T ss_pred ---hHhhccccHHHHHHHHh
Confidence 99999998555544443
No 66
>PLN02978 pyridoxal kinase
Probab=99.52 E-value=1e-12 Score=127.21 Aligned_cols=162 Identities=17% Similarity=0.055 Sum_probs=115.0
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhh--CCCeEEEeCCCCC--CCCCChHHHHHhHH-hhhccCcEEEcCHhHHhcc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL--PLWPSADKAREGIL-SIWETADIIKISEEEISFL 280 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~--~~~~~~~~~~~~~~-~ll~~~dvl~~N~~E~~~l 280 (400)
++.+.++-+ ......+.+.++++.+++ .++++++||..+. .+|.. +...+.++ .+++.+|+++||+.|++.|
T Consensus 87 ~~ai~~G~l--~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~-~~~~~~~~~~ll~~adiitPN~~Ea~~L 163 (308)
T PLN02978 87 YTHLLTGYI--GSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVP-PELVPVYREKVVPLATMLTPNQFEAEQL 163 (308)
T ss_pred cCEEEeccc--CCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCC-hhHHHHHHHHHHhhCCeeccCHHHHHHH
Confidence 666766543 234445677778887776 4578999998654 34433 33445564 5899999999999999999
Q ss_pred cCCCCCcH---HHHHHHHHhCCCcEEEEEecC-CcEEEEeC---------CceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 281 TQGEDPYD---DAVVYKLFHANLKLLLVTEGP-DGCRYYTK---------DFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 281 ~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~-~G~~~~~~---------~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
+|.+..+. .++++++.+.|++.||||-+. +|...... ++.+++..++++.. ++|+||+|.|.+++.
T Consensus 164 ~g~~~~~~~~~~~a~~~l~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~GtGD~fsA~laa~ 242 (308)
T PLN02978 164 TGIRIVTEEDAREACAILHAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKIPAY-FTGTGDLMAALLLGW 242 (308)
T ss_pred hCCCCCCHHHHHHHHHHHHHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCCCCC-CCCchHHHHHHHHHH
Confidence 99764433 355677888899999998754 34332211 24556666666655 489999999988888
Q ss_pred HHcC-CccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 348 LSTD-FSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 348 l~~g-~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+.+| .+ +++|+++|...-...+..
T Consensus 243 l~~g~~~-------l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 243 SHKYPDN-------LDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HhcCCcC-------HHHHHHHHHHHHHHHHHH
Confidence 8887 68 999999998877766654
No 67
>PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional
Probab=99.45 E-value=1.6e-12 Score=134.69 Aligned_cols=159 Identities=18% Similarity=0.151 Sum_probs=111.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC----CCCCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
..+.+.+|-+ ......+.+.++++.. .+.+|++||..+. .++ .+...+.++++++++|+++||..|++.|
T Consensus 98 ~~~aikiG~l--~s~~~i~~v~~~l~~~--~~~~vVlDPv~~~~~G~~l~--~~~~~~~~~~Ll~~advItPN~~Ea~~L 171 (530)
T PRK14713 98 TVDAVKIGML--GDAEVIDAVRTWLAEH--RPPVVVLDPVMVATSGDRLL--EEDAEAALRELVPRADLITPNLPELAVL 171 (530)
T ss_pred CCCEEEECCc--CCHHHHHHHHHHHHhC--CCCCEEECCcccCCCCCCCC--CHHHHHHHHHHhhhhheecCChHHHHHH
Confidence 3466666543 2222233444444332 2346999998653 233 2345666778999999999999999999
Q ss_pred cCCCCC-cHH---HHHHHHHhCCCcEEEEEecCCc-----EEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQGEDP-YDD---AVVYKLFHANLKLLLVTEGPDG-----CRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~~~~-~~~---~~~~~l~~~g~~~vvvT~G~~G-----~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|.+.. +.+ ++++++.+.+...||||.|..+ ..++. +++.++++.++++.+|++|+||+|.|+|+++|++
T Consensus 172 tg~~~~~~~~d~~~aa~~L~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~~v~~~~t~GaGD~fsaalaa~La~ 251 (530)
T PRK14713 172 LGEPPATTWEEALAQARRLAAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGPRVDTRNTHGTGCSLSSALATRLGR 251 (530)
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeeeeeCCCCCCcHHHHHHHHHHHHHHC
Confidence 996532 222 3456776665578999988642 33444 4446778888889999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHh
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
|.+ +++|+++|...-...+
T Consensus 252 G~~-------l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 252 GGD-------WAAALRWATAWLHGAI 270 (530)
T ss_pred CCC-------HHHHHHHHHHHHHHHH
Confidence 999 9999999987433333
No 68
>cd01171 YXKO-related B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.
Probab=99.45 E-value=2.2e-12 Score=121.47 Aligned_cols=158 Identities=15% Similarity=-0.016 Sum_probs=114.3
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHH--hhhccCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGIL--SIWETADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~--~ll~~~dvl~~N~~E~~ 278 (400)
..+.+.|+++++.- +... +...++++.++++++++++|+... .+..... .+.+.+++++||..|++
T Consensus 73 ~~~~~~d~v~ig~g-l~~~---~~~~~i~~~~~~~~~pvVlDa~~~--------~~~~~~~~~~~~~~~~iltPn~~E~~ 140 (254)
T cd01171 73 ELLERADAVVIGPG-LGRD---EEAAEILEKALAKDKPLVLDADAL--------NLLADEPSLIKRYGPVVLTPHPGEFA 140 (254)
T ss_pred hhhccCCEEEEecC-CCCC---HHHHHHHHHHHhcCCCEEEEcHHH--------HHhhcChhhhccCCCEEECCCHHHHH
Confidence 34567888888652 2111 566778888888899999998521 1111100 13567999999999999
Q ss_pred cccCCCCCc----HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 279 FLTQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 279 ~l~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
.|++....+ ..+.++++.+++. .+++..|. +.+++++++.++++....+.++++|+||+|.|.+.+.+.+|++
T Consensus 141 ~L~g~~~~~~~~~~~~~a~~l~~~~~-~~vvlkG~-~~~i~~~~~~~~~~~~~~~~~~~~GaGD~lag~iaa~la~g~~- 217 (254)
T cd01171 141 RLLGALVEEIQADRLAAAREAAAKLG-ATVVLKGA-VTVIADPDGRVYVNPTGNPGLATGGSGDVLAGIIAALLAQGLS- 217 (254)
T ss_pred HHhCCChhhhhhHHHHHHHHHHHHcC-cEEEEcCC-CCEEECCCCcEEEECCCCcccccCchHHHHHHHHHHHHHcCCC-
Confidence 999976432 1245677777764 45556674 6666766555677777788999999999998888888889999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhccc
Q 015777 355 LQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
+++|+++|+.+.+.+.+..
T Consensus 218 ------~~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 218 ------PLEAAALAVYLHGLAGDLA 236 (254)
T ss_pred ------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999998888753
No 69
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional
Probab=99.44 E-value=2.4e-12 Score=138.42 Aligned_cols=160 Identities=14% Similarity=0.138 Sum_probs=119.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhC-CCeEEEeCCCCCC----CCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLP----LWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~-g~~v~~D~~~~~~----~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.+.+.+|-+. +.+....+.+.+++. +.++++||..... ++ .+...+.++++++.+|+++||..|++.
T Consensus 310 ~~~aiKiGmL~-----s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~--~~~~~~~l~~Llp~adlItPN~~Ea~~ 382 (755)
T PRK09517 310 TVDAVKLGMLG-----SADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLL--DADATEALRRLAVHVDVVTPNIPELAV 382 (755)
T ss_pred CCCEEEECCCC-----CHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCC--CHHHHHHHHHHhCcccCccCCHHHHHH
Confidence 35667766431 245666777777774 5779999975422 22 123344456789999999999999999
Q ss_pred ccCCC-CCcH---HHHHHHHHhCCCcEEEEEecC------CcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH
Q 015777 280 LTQGE-DPYD---DAVVYKLFHANLKLLLVTEGP------DGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS 349 (400)
Q Consensus 280 l~~~~-~~~~---~~~~~~l~~~g~~~vvvT~G~------~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~ 349 (400)
|+|.. ..+. .+.++++.+.+...||||.|. .|+++..++..++++.++++.+|++|+||+|.|+|+++|+
T Consensus 383 L~g~~~~~~~~d~~~aa~~L~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v~~~~t~GaGDtfsaaiaa~La 462 (755)
T PRK09517 383 LCGEAPAITMDEAIAQARGFARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRVNTTNSHGTGCSLSAALATLIA 462 (755)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeecccCCCCCcChHHHHHHHHHHHHH
Confidence 99953 2222 234567766544589999994 5676665555678888889999999999999999999999
Q ss_pred cCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 350 TDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 350 ~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+|.+ +++|+++|...-...+..
T Consensus 463 ~G~s-------l~eAv~~A~~~v~~~i~~ 484 (755)
T PRK09517 463 AGES-------VEKALEWATRWLNEALRH 484 (755)
T ss_pred CCCC-------HHHHHHHHHHHHHHHHHh
Confidence 9999 999999999888877754
No 70
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=99.43 E-value=5.8e-12 Score=118.11 Aligned_cols=161 Identities=19% Similarity=0.190 Sum_probs=111.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC---CCCCChHHHHHhHHh-hhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL---PLWPSADKAREGILS-IWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---~~~~~~~~~~~~~~~-ll~~~dvl~~N~~E~~~l 280 (400)
+.+.+.+|-+. +.+.+..+.+..++.+.++++||.... .... .+...+.+++ +++.+|+++||..|++.|
T Consensus 60 ~~~aikiG~l~-----~~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~-~~~~~~~~~~~Llp~AdiitPN~~Ea~~L 133 (246)
T PF08543_consen 60 KFDAIKIGYLG-----SAEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYV-DPDVVEAMREELLPLADIITPNLTEAELL 133 (246)
T ss_dssp C-SEEEE-S-S-----SHHHHHHHHHHHHHTTTEEEEE---EETTTECTS-SHHHHHHHHHHCGGG-SEEE-BHHHHHHH
T ss_pred cccEEEEcccC-----CchhhhhHHHHHhccCCCEEEecccccCCCCcCC-CHHHHHHHHhccCCcCeEEeCCHHHHHHH
Confidence 67888877542 234555556666667789999995321 1111 2334445554 999999999999999999
Q ss_pred cCCCCCcHH---HHHHHHHhCCCcEEEEEecCC----c---EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQGEDPYDD---AVVYKLFHANLKLLLVTEGPD----G---CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~~~~~~~---~~~~~l~~~g~~~vvvT~G~~----G---~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|.+..+.+ +++++++++|++.|+||-+.. + -+++.+++.+.+..++.+..+..|.||.|.++|++.|++
T Consensus 134 ~g~~i~~~~~~~~~~~~l~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~GTGd~fss~laa~l~~ 213 (246)
T PF08543_consen 134 TGREINSEEDIEEAAKALLALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRIPTGSFHGTGDLFSSALAAFLAK 213 (246)
T ss_dssp HTS--SSHHHHHHHHHHHHHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEECTSGCTTHHHHHHHHHHHHHHT
T ss_pred hCCCCCChHhHHHHHHHHHHhCCceEEEeeeccccccccccceeeeccceeecceeEEcCCCCCCchhHHHHHHHHHHHc
Confidence 997665543 456888899999999998863 2 344555666666666666678999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|.+ +++|++.|...-...+..
T Consensus 214 g~~-------l~~Av~~A~~~v~~~i~~ 234 (246)
T PF08543_consen 214 GYS-------LEEAVEKAKNFVRRAIKN 234 (246)
T ss_dssp TSS-------HHHHHHHHHHHHHHHHHH
T ss_pred CCC-------HHHHHHHHHHHHHHHHHH
Confidence 999 999999998877776653
No 71
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.
Probab=99.40 E-value=9.7e-12 Score=116.20 Aligned_cols=164 Identities=18% Similarity=0.019 Sum_probs=116.2
Q ss_pred hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc--CcEEEcCHhHH
Q 015777 200 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET--ADIIKISEEEI 277 (400)
Q Consensus 200 ~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~--~dvl~~N~~E~ 277 (400)
.+.++++|+++++.- +..+...+.+..+++.+++.++++++||..... +... .+.+.+++.. +|+++||..|+
T Consensus 44 ~~~l~~~d~vvi~~G-~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~---~~~~-~~~~~~ll~~~~~~ilTPN~~Ea 118 (242)
T cd01170 44 EELAKIAGALVINIG-TLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGA---TSFR-TEVAKELLAEGQPTVIRGNASEI 118 (242)
T ss_pred HHHHHHcCcEEEeCC-CCChHHHHHHHHHHHHHHhcCCCEEEcccccCc---chhH-HHHHHHHHhcCCCeEEcCCHHHH
Confidence 366788898888532 223334556667777788899999999964321 1111 1234455554 99999999999
Q ss_pred hcccCCCCC------------cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHH
Q 015777 278 SFLTQGEDP------------YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGIL 345 (400)
Q Consensus 278 ~~l~~~~~~------------~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl 345 (400)
..|++.... +..+.++++.+++...|++| |.... ++++++.++++..+..+.++.|+||+|.|++.
T Consensus 119 ~~L~g~~~~~~~~~~~~~~~~~~~~aa~~l~~~~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~~~~~v~GtGdtLa~aiA 196 (242)
T cd01170 119 AALAGLTGLGKGVDSSSSDEEDALELAKALARKYGAVVVVT-GEVDY-ITDGERVVVVKNGHPLLTKITGTGCLLGAVIA 196 (242)
T ss_pred HHHhCCCCCcCcccCCCcchHHHHHHHHHHHHHhCCEEEEE-CCCcE-EEECCEEEEEeCCCccccCCCchHHHHHHHHH
Confidence 999986532 12345567776666678898 66654 55666677777655455667999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
..+.+|.+ +.+|+..|...-+..+.
T Consensus 197 a~LA~g~~-------~~~A~~~A~~~~~~a~~ 221 (242)
T cd01170 197 AFLAVGDD-------PLEAAVSAVLVYGIAGE 221 (242)
T ss_pred HHHhCCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999999 99999999766665553
No 72
>COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism]
Probab=99.37 E-value=4.1e-11 Score=111.11 Aligned_cols=161 Identities=14% Similarity=0.108 Sum_probs=122.6
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCC-CeEEEeCCCCCCCC---CChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLPLW---PSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~~~---~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.+.+-++-+ .+.+.+..+.+..++++ .++++||......- ...+......++++|+++++.||..|++.|
T Consensus 72 ~v~avKtGML-----~~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L 146 (263)
T COG0351 72 PVDAVKTGML-----GSAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEAL 146 (263)
T ss_pred CCCEEEECCc-----CCHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHH
Confidence 3456665533 23567778888888888 78999995332211 122333334447999999999999999999
Q ss_pred cCC-CCCcHHH---HHHHHHhCCCcEEEEEecCCc----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 281 TQG-EDPYDDA---VVYKLFHANLKLLLVTEGPDG----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 281 ~~~-~~~~~~~---~~~~l~~~g~~~vvvT~G~~G----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
+|. ...+.++ +.+.+.+.|++.|+||-|... -++|.++..+.+..+.++-.++-|+|++|.+++.+.|++|.
T Consensus 147 ~g~~~i~~~~d~~~a~~~i~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri~t~~tHGTGCTlSaAIaa~LA~G~ 226 (263)
T COG0351 147 SGLPKIKTEEDMKEAAKLLHELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRIPTKNTHGTGCTLSAAIAANLAKGL 226 (263)
T ss_pred cCCCccCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCceeEEEcCCceEEEeccccCCCCCCCccHHHHHHHHHHHHcCC
Confidence 995 5544433 335666889999999988754 35566666777788888999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhc
Q 015777 353 SLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+ +++|++.|-..-...+.
T Consensus 227 ~-------l~~AV~~Ak~fv~~AI~ 244 (263)
T COG0351 227 S-------LEEAVKKAKEFVTRAIR 244 (263)
T ss_pred C-------HHHHHHHHHHHHHHHHh
Confidence 9 99999999988887777
No 73
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=99.32 E-value=4.6e-11 Score=113.74 Aligned_cols=175 Identities=15% Similarity=0.055 Sum_probs=118.6
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.++.+|++.+++- +... +.+.++++.+++.++++++|+. ...+..........+++++||..|++.|
T Consensus 88 ~~~~~~davvig~G-l~~~---~~~~~l~~~~~~~~~pvVlDa~--------g~~l~~~~~~~~~~~~vItPN~~El~~L 155 (272)
T TIGR00196 88 ELLERYDVVVIGPG-LGQD---PSFKKAVEEVLELDKPVVLDAD--------ALNLLTYDKPKREGEVILTPHPGEFKRL 155 (272)
T ss_pred hhhccCCEEEEcCC-CCCC---HHHHHHHHHHHhcCCCEEEEhH--------HHHHHhhcccccCCCEEECCCHHHHHHH
Confidence 44567888888652 2222 2266778888888999999984 2222222211134689999999999999
Q ss_pred cCCCCCcH---HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 281 TQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 281 ~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
+|...... .+.++++.+. ...+|++.|..+.++..++..+. .....+..+++|+||++.|.+.+.+.+|.+
T Consensus 156 ~g~~~~~~~~~~~aa~~l~~~-~~~vVv~kG~~~~i~~~~~~~~~-~~~~~~~~~~~GaGD~lag~iaa~la~g~~---- 229 (272)
T TIGR00196 156 LGLVNEIQGDRLEAAQDIAQK-LQAVVVLKGAADVIAAPDGDLWI-NKTGNAALAKGGTGDVLAGLIGGLLAQNLD---- 229 (272)
T ss_pred hCCchhhhhhHHHHHHHHHHH-hCCEEEEcCCCCEEEcCCCeEEE-ECCCCCccCCCCchHHHHHHHHHHHhCCCC----
Confidence 99754322 2445666665 34588889999986654444444 344567788999999965555555668998
Q ss_pred hHHHHHHHHHH---HHHHHHHhccc-CCCCCCCCHHHHHHHHhCC
Q 015777 358 EDQLRDALRFA---NACGALTVMER-GAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 358 ~~~l~~al~~A---~a~Aa~~v~~~-G~~~~~p~~~~l~~~l~~~ 398 (400)
+.+|+..| +..|+..+... |+.. .+.+||.+.+.+.
T Consensus 230 ---~~~A~~~a~~~~~~a~~~~~~~~g~~~--~~~~dl~~~i~~~ 269 (272)
T TIGR00196 230 ---PFDAACNAAFAHGLAGDLALKNHGAYG--LTALDLIEKIPRV 269 (272)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCCC--cCHHHHHHHHHHH
Confidence 89999777 77787776554 6432 4778888877654
No 74
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=99.19 E-value=7.2e-10 Score=103.41 Aligned_cols=166 Identities=23% Similarity=0.149 Sum_probs=116.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhC--CCeEEEeCC--CCCCCCCChHHHHHhHHhhhccCcEEEcCHhH
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA--GVVLSYDPN--LRLPLWPSADKAREGILSIWETADIIKISEEE 276 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~--g~~v~~D~~--~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E 276 (400)
+.+..+|.+..|.+ ........+.++++..|+. ...+++||. ....++...+.......++++.+|++.||..|
T Consensus 69 ~~~~~~davltGYl--gs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fE 146 (281)
T COG2240 69 DKLGECDAVLTGYL--GSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFE 146 (281)
T ss_pred ccccccCEEEEccC--CCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHH
Confidence 45678888876643 3344455666777777776 456899994 22244443333333333689999999999999
Q ss_pred HhcccCCCCCcHHHH---HHHHHhCCCcEEEEEecCC-----cEEEEeCC---ceEEEccccccccCCCCchHHHHHHHH
Q 015777 277 ISFLTQGEDPYDDAV---VYKLFHANLKLLLVTEGPD-----GCRYYTKD---FSGRVQGLKVEAVDATGAGDAFVAGIL 345 (400)
Q Consensus 277 ~~~l~~~~~~~~~~~---~~~l~~~g~~~vvvT~G~~-----G~~~~~~~---~~~~vpa~~v~vvDttGAGDaF~Agfl 345 (400)
++.|+|....+.+++ ++.|.+.|.+.|+||.=.. |.+++... ...|+- +.++ .+.+|.||.|.|.|+
T Consensus 147 Le~Ltg~~~~~~~da~~aa~~L~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v~-~~~~GtGDL~salll 224 (281)
T COG2240 147 LEILTGKPLNTLDDAVKAARKLGADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLVP-FIPNGTGDLFSALLL 224 (281)
T ss_pred HHHHhCCCCCCHHHHHHHHHHHhhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcCC-CCCCCchHHHHHHHH
Confidence 999999987665544 4666677899999995433 55555433 233443 3333 339999999999999
Q ss_pred HHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 346 SQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 346 ~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
+++++|.+ +++|+..+..+-...+.
T Consensus 225 a~lL~g~~-------~~~al~~~~~~V~evl~ 249 (281)
T COG2240 225 ARLLEGLS-------LTQALERATAAVYEVLQ 249 (281)
T ss_pred HHHHcCCC-------HHHHHHHHHHHHHHHHH
Confidence 99999999 99999998877766655
No 75
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=99.10 E-value=4.6e-09 Score=99.42 Aligned_cols=175 Identities=18% Similarity=0.085 Sum_probs=112.3
Q ss_pred CCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-
Q 015777 187 PSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE- 265 (400)
Q Consensus 187 ~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~- 265 (400)
.++-|...++++. +.++.++.++++. ....+...+.+..+++.+++.++++++||...... ... .+...++++
T Consensus 37 ~sp~m~~~~~e~~-~~~~~~~alvi~~-G~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~-~~~---~~~~~~ll~~ 110 (263)
T PRK09355 37 ASPAMAHAPEEAE-EMAKIAGALVINI-GTLTEERIEAMLAAGKIANEAGKPVVLDPVGVGAT-SYR---TEFALELLAE 110 (263)
T ss_pred CCcccCCCHHHHH-HHHHhcCceEEeC-CCCCHHHHHHHHHHHHHHHhcCCCEEECCcccCcc-hhh---HHHHHHHHHh
Confidence 3334444444443 5667778777643 33344334445666777888999999999653221 111 122223333
Q ss_pred -cCcEEEcCHhHHhcccCCCCC-----------cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCC
Q 015777 266 -TADIIKISEEEISFLTQGEDP-----------YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDA 333 (400)
Q Consensus 266 -~~dvl~~N~~E~~~l~~~~~~-----------~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDt 333 (400)
++++++||..|+..|++.... +..+.++++.+++...|++|-+.+ ++++++..+.++.-.....+.
T Consensus 111 ~~~~vItPN~~E~~~L~g~~~~~~~vd~~~~~~~~~~~a~~la~~~~~~VvvkG~~d--~I~~~~~~~~~~~g~~~~~~v 188 (263)
T PRK09355 111 VKPAVIRGNASEIAALAGEAAETKGVDSTDGSADAVEIAKAAAKKYGTVVVVTGEVD--YITDGERVVSVHNGHPLMTKV 188 (263)
T ss_pred cCCcEecCCHHHHHHHhCCCcccCCcCCCCCHHHHHHHHHHHHHHhCCEEEEECCCc--EEEeCCEEEEEeCCCcccCCc
Confidence 689999999999999986421 223455677776666788885443 444555555555323345566
Q ss_pred CCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHh
Q 015777 334 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
+|+||++.|.+.+.+..|.+ +.+|+..|...-+.+-
T Consensus 189 ~GtGc~L~~~iaa~lA~g~~-------~~~A~~~A~~~~~~a~ 224 (263)
T PRK09355 189 TGTGCLLSAVVAAFAAVEKD-------YLEAAAAACAVYGIAG 224 (263)
T ss_pred ccccHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHH
Confidence 99999999999999999998 8888888876554443
No 76
>PTZ00493 phosphomethylpyrimidine kinase; Provisional
Probab=99.09 E-value=5.2e-09 Score=100.90 Aligned_cols=161 Identities=10% Similarity=0.033 Sum_probs=106.1
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhC------CCeEEEeCCCCCCCCC---C-hHHHHHhHHhhhccCcEEEcCHh
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDA------GVVLSYDPNLRLPLWP---S-ADKAREGILSIWETADIIKISEE 275 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~------g~~v~~D~~~~~~~~~---~-~~~~~~~~~~ll~~~dvl~~N~~ 275 (400)
.+.+-+|-+. +.+.+..+.+..++. ..++++||......-. . .+......+.+++++|++.||..
T Consensus 74 i~aIKiGmL~-----s~e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~ 148 (321)
T PTZ00493 74 IDVVKLGVLY-----SKKIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFY 148 (321)
T ss_pred CCEEEECCcC-----CHHHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHH
Confidence 5677766432 234445555555443 2248999963222111 1 12223333569999999999999
Q ss_pred HHhcccC-----CCCC--cHHHHHHHHHh-CCCcEEEEEecCCc------E------EEEeC---------------C--
Q 015777 276 EISFLTQ-----GEDP--YDDAVVYKLFH-ANLKLLLVTEGPDG------C------RYYTK---------------D-- 318 (400)
Q Consensus 276 E~~~l~~-----~~~~--~~~~~~~~l~~-~g~~~vvvT~G~~G------~------~~~~~---------------~-- 318 (400)
|++.|++ .... +..++++++.+ +|++.|+||-|... . +++.+ +
T Consensus 149 Ea~~L~g~~~~~~~~~~~~~~~aA~~l~~~~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~~~~~ 228 (321)
T PTZ00493 149 ECKVILEALDCQMDLSKANMTELCKLVTEKLNINACLFKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQIDAGGV 228 (321)
T ss_pred HHHHHhCCCcccCCCCHHHHHHHHHHHHHhcCCCEEEECcCCCcccccccccccceeEEecCCccccccccccccccccc
Confidence 9999998 2211 22355677776 69999999987632 1 22321 1
Q ss_pred ----ceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 319 ----FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 319 ----~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+.+++...+++..++.|.||+|.+++++.|++|.+ +++|++.|...-...+..
T Consensus 229 ~~~~~~~~~~~~ri~~~~~hGTGc~fASAIAa~LA~G~~-------l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 229 TYLYDVYKLRSKRKPGKDIHGTGCTLSTAIACYLAKKHN-------ILQSCIESKKYIYNCIRY 285 (321)
T ss_pred cccceEEEEEecccCCCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 12345555555667899999999999999999999 999999998777666654
No 77
>TIGR00694 thiM hydroxyethylthiazole kinase. This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE.
Probab=99.00 E-value=1.8e-08 Score=94.66 Aligned_cols=194 Identities=19% Similarity=0.070 Sum_probs=116.0
Q ss_pred CccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--
Q 015777 188 SADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-- 265 (400)
Q Consensus 188 ~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-- 265 (400)
++-|...++++. ++.+.++.+.+..-.+ .+...+.+..+++.+++.++|+++||..... +..+. +...++++
T Consensus 33 sp~m~~~~~e~~-~~~~~~~al~ik~G~l-~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~---s~~r~-~~~~~Ll~~~ 106 (249)
T TIGR00694 33 SPVMSEAEEEVA-ELAKIAGALVINIGTL-DKESIEAMIAAGKSANELGVPVVLDPVGVGA---TKFRT-ETALELLSEG 106 (249)
T ss_pred ChhhcCCHHHHH-HHHHHcCceEEeCCCC-CHHHHHHHHHHHHHHHhcCCCEEEccccccc---chhHH-HHHHHHHhhc
Confidence 333444454443 5556677666543222 2233456667777788889999999974322 22221 23344555
Q ss_pred cCcEEEcCHhHHhcccCCCC-----------CcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCC
Q 015777 266 TADIIKISEEEISFLTQGED-----------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDAT 334 (400)
Q Consensus 266 ~~dvl~~N~~E~~~l~~~~~-----------~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDtt 334 (400)
+++++++|..|++.|++... .+..+.++++.+++...|++|-+.+ +++++++.+.+..-....-..+
T Consensus 107 ~~~vITpN~~E~~~L~g~~~~~~gvd~~~~~~d~~~~a~~la~~~~~~VllkG~~D--~i~~~~~~~~~~~g~~~~~~~~ 184 (249)
T TIGR00694 107 RFAAIRGNAGEIASLAGETGLMKGVDSGEGAADAIRAAQQAAQKYGTVVVITGEVD--YVSDGTSVYTIHNGTELLGKIT 184 (249)
T ss_pred CCceeCCCHHHHHHHhCCCCCCCCcCCccchHHHHHHHHHHHHHhCCEEEEECCCc--EEEeCCEEEEECCCChHHhCCc
Confidence 47999999999999998541 1123455667666444777764432 4555555555433222122247
Q ss_pred CchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc---ccCCCCCCCCHHHHHHHHhC
Q 015777 335 GAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM---ERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 335 GAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~---~~G~~~~~p~~~~l~~~l~~ 397 (400)
|.||++.+.+.+.+.+|.+ +.+|+..|...-..+.. +.+..++. ...++.+.|.+
T Consensus 185 GtGc~LssaIaa~LA~g~~-------~~~A~~~A~~~~~~a~~~a~~~~~g~g~-~~~~l~d~l~~ 242 (249)
T TIGR00694 185 GSGCLLGSVVAAFCAVEED-------PLDAAISACLLYKIAGELAAERSKGPGS-FQIELLDALSQ 242 (249)
T ss_pred cchHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHHHHhcCCCCcc-HHHHHHHHHHc
Confidence 9999999999999999999 88998888744333332 22111222 35566665544
No 78
>KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism]
Probab=98.45 E-value=6.3e-06 Score=75.86 Aligned_cols=161 Identities=21% Similarity=0.139 Sum_probs=99.0
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCC--CCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhH
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPN--LRLPLWPSADKAREGILSIW-ETADIIKISEEE 276 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~--~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E 276 (400)
.+...+.+..|-+. .......+.++.+..|+.+ ...++||. ...+++.+ +.....+++++ +.+|++.||..|
T Consensus 78 n~~~Y~~vLTGY~~--n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~-eelipvYr~~i~~ladiiTPNqFE 154 (308)
T KOG2599|consen 78 NLNKYDAVLTGYLP--NVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVP-EELIPVYRDLIIPLADIITPNQFE 154 (308)
T ss_pred cccccceeeeeccC--ChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEecc-HHHHHHHHHhhcchhhhcCCcchh
Confidence 34466776555332 2223445556666666654 56677883 33344443 34445555554 459999999999
Q ss_pred HhcccCCCCCcHHHH---HHHHHhCCCcEEEEEecCC----cEEEE----eCC-ceEEEccccccccCCCCchHHHHHHH
Q 015777 277 ISFLTQGEDPYDDAV---VYKLFHANLKLLLVTEGPD----GCRYY----TKD-FSGRVQGLKVEAVDATGAGDAFVAGI 344 (400)
Q Consensus 277 ~~~l~~~~~~~~~~~---~~~l~~~g~~~vvvT~G~~----G~~~~----~~~-~~~~vpa~~v~vvDttGAGDaF~Agf 344 (400)
++.|+|....+.+++ +++++++|++.||||...- |..++ ..+ +.+.+.-+++.. --||.||.|.|-+
T Consensus 155 ~EiLtg~~I~t~eda~~a~~~lhq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki~~-~FtGTGDLfsaLL 233 (308)
T KOG2599|consen 155 AEILTGMEIRTEEDAKRAVEKLHQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKIDG-VFTGTGDLFSALL 233 (308)
T ss_pred hhhhcCCeeccHHHHHHHHHHHHHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEecccce-EEecccHHHHHHH
Confidence 999999998876654 4677888999999996543 42222 222 333333333221 2389999999988
Q ss_pred HHHHHcCCccccchHHHHHHHHHHHH
Q 015777 345 LSQLSTDFSLLQKEDQLRDALRFANA 370 (400)
Q Consensus 345 l~~l~~g~~~~~~~~~l~~al~~A~a 370 (400)
++.+.+-.+ ..++..++..+..
T Consensus 234 la~~~~~~~----~~~l~~a~e~~ls 255 (308)
T KOG2599|consen 234 LAWLHESPD----NDDLSKAVEQVLS 255 (308)
T ss_pred HHHHhcCCC----cchHHHHHHHHHH
Confidence 888877642 1235555555443
No 79
>KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription]
Probab=98.18 E-value=2.1e-05 Score=76.81 Aligned_cols=162 Identities=17% Similarity=0.084 Sum_probs=111.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCC---CCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP---LWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
+|+++-.|-++ .+.....+.+.++. .+-..+++||..... .....+-..-..++++|.+||+.+|..|+-.|.
T Consensus 92 ~C~VvKTGML~--~~~I~~vi~q~l~~--~~~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll 167 (523)
T KOG2598|consen 92 KCDVVKTGMLP--SPEIVKVIEQSLQK--FNIPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILL 167 (523)
T ss_pred cccEEeecCcC--chHHHHHHHHHHHh--hcCcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHH
Confidence 57777766432 22223334444433 233578899842211 111233445566779999999999999999998
Q ss_pred CCCC------Cc---HHHHHHHHHhCCCcEEEEEecCCcE-----------------EEEeCCceEEEccccccccCCCC
Q 015777 282 QGED------PY---DDAVVYKLFHANLKLLLVTEGPDGC-----------------RYYTKDFSGRVQGLKVEAVDATG 335 (400)
Q Consensus 282 ~~~~------~~---~~~~~~~l~~~g~~~vvvT~G~~G~-----------------~~~~~~~~~~vpa~~v~vvDttG 335 (400)
+... .+ -+..+..+.+.|+++|+++.|.-.. ++|.+.+.+.++.+-+.-..+-|
T Consensus 168 ~~~~~~~~~i~~v~di~~~~~~ihk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~~t~~tHG 247 (523)
T KOG2598|consen 168 KKEKREISKIQSVFDIAKDAAKIHKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYLATKHTHG 247 (523)
T ss_pred hhcccCCcccccHHHHHHHHHHHHhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEecccccccccccC
Confidence 8422 11 1334567888999999999875321 34556677788888788889999
Q ss_pred chHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 336 AGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|-+..+++..-|+.|.+ +.+|++.|...--.+++
T Consensus 248 tgCtLaSAIASnLA~g~s-------l~qAv~~ai~yvq~Ai~ 282 (523)
T KOG2598|consen 248 TGCTLASAIASNLARGYS-------LLQAVQGAIEYVQNAIA 282 (523)
T ss_pred ccchHHHHHHHHHhhcCC-------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999 88999888765444443
No 80
>PRK03979 ADP-specific phosphofructokinase; Provisional
Probab=97.94 E-value=0.00043 Score=69.73 Aligned_cols=74 Identities=14% Similarity=0.053 Sum_probs=51.2
Q ss_pred CCccEEEEccccccCch-----h----HHHHHHHHHHH--hhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEc
Q 015777 204 TKAKIFHYGSISLITEP-----C----KSAHIAAAKAA--KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI 272 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~-----~----~~~~~~~~~~a--~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~ 272 (400)
...|.++++|+-++.+. . .+...+.++.. +..++++.+.... +.+.+-....+..+++++|.+-+
T Consensus 221 ~~~D~avlSG~q~i~~~y~dg~~~~~~l~r~~~~i~~L~~~~~~i~iH~E~As----~~~~~ir~~i~~~ilp~vDSlGm 296 (463)
T PRK03979 221 KMVDGAILSGYQGIKEEYSDGKTAEYYLKRAKEDIKLLKKKNKDIKIHVEFAS----IQNREIRKKIITYILPHVDSVGM 296 (463)
T ss_pred cCCCEEEEechhhhhccccccccHHHHHHHHHHHHHHHhhCCCCceEEEEecc----ccCHHHHHHHHHhhccccccccC
Confidence 45899999998765441 1 22233344444 3457899999864 33456666667789999999999
Q ss_pred CHhHHhccc
Q 015777 273 SEEEISFLT 281 (400)
Q Consensus 273 N~~E~~~l~ 281 (400)
||.|+..+.
T Consensus 297 NE~ELa~l~ 305 (463)
T PRK03979 297 DETEIANIL 305 (463)
T ss_pred CHHHHHHHH
Confidence 999998665
No 81
>PRK14039 ADP-dependent glucokinase; Provisional
Probab=97.87 E-value=0.0014 Score=65.98 Aligned_cols=78 Identities=17% Similarity=0.156 Sum_probs=53.9
Q ss_pred hcCCccEEEEccccccCch------hHHH---HHHHHHHH--hhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 202 LITKAKIFHYGSISLITEP------CKSA---HIAAAKAA--KDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~------~~~~---~~~~~~~a--~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
...+.|.++++|+.++.+. -.+. ..+.++.. +..++++.+.... +.+.+-....+..+++++|.+
T Consensus 207 ~~~~~D~avlSG~q~l~d~y~dg~~~~e~l~~~~~~i~~l~~~~~~i~iH~E~As----~~~~~i~~~v~~~Ilp~VDSl 282 (453)
T PRK14039 207 HAGEMDGALISGFHLLLETYPDGSTYREKLEDSLAQLKWWKSKNEKLRIHAELGH----FASKEIANSVFLILAGIVDSI 282 (453)
T ss_pred hccCCCEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHHHhcCCCceEEEEecC----cccHHHHHHHHHHhhcccccc
Confidence 3447899999998765331 1222 22334444 2345899999864 345666677777899999999
Q ss_pred EcCHhHHhcccCC
Q 015777 271 KISEEEISFLTQG 283 (400)
Q Consensus 271 ~~N~~E~~~l~~~ 283 (400)
-+||.|+..+...
T Consensus 283 GmNEqELa~l~~~ 295 (453)
T PRK14039 283 GMNEDELAMLANL 295 (453)
T ss_pred cCCHHHHHHHHHH
Confidence 9999999988765
No 82
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []. Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....
Probab=97.86 E-value=0.0014 Score=60.99 Aligned_cols=146 Identities=19% Similarity=0.099 Sum_probs=86.2
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh--ccCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW--ETADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll--~~~dvl~~N~~E~~ 278 (400)
++.+.++.+++.--. ..+...+.+....+.+++.++|+++||..... ...-++...+++ -++++++.|..|..
T Consensus 45 e~~~~a~al~iNiGT-l~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGa----s~~R~~~~~~LL~~~~~~vIrGN~sEI~ 119 (246)
T PF02110_consen 45 EFASIADALVINIGT-LTDERIEAMKKAAKAANELGIPVVLDPVGVGA----SKFRTEFALELLNNYKPTVIRGNASEIA 119 (246)
T ss_dssp HHHHCTSEEEEESTT-SSHHHHHHHHHHHHHHHHTT--EEEE-TTBTT----BHHHHHHHHHHHCHS--SEEEEEHHHHH
T ss_pred HHHHHcCEEEEECCC-CCHhHHHHHHHHHHHHHHcCCCEEEeCcccCC----cHHHHHHHHHHHHhCCCcEEEeCHHHHH
Confidence 455566666543211 22333567788899999999999999964322 122234555666 37999999999999
Q ss_pred cccCCCCC---------cH--HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 279 FLTQGEDP---------YD--DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 279 ~l~~~~~~---------~~--~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
.|.+.... .. .+.++.+.++.-..|++| |+.-.+ .++.+.+.++--.--.-.-||.|+...+-+.+.
T Consensus 120 aLag~~~~~kGVDs~~~~~~~~~~a~~lA~k~~~vVvvT-G~~D~I-sdg~~~~~i~nG~~~l~~itGtGC~lgaliaaf 197 (246)
T PF02110_consen 120 ALAGEDSKAKGVDSGDSDEDAIEAAKQLAQKYNCVVVVT-GEVDYI-SDGNRVYRIPNGSPLLSKITGTGCMLGALIAAF 197 (246)
T ss_dssp HHHTCCCCSCSSSSSCGSHHHHHHHHHHHHHTTSEEEEE-SSSEEE-EESSCEEEECSSSGGGGGSTTHHHHHHHHHHHH
T ss_pred HHhCcCCCCCCcCcCCcchHHHHHHHHHHHhcCCEEEEe-cCCcEE-ECCCeEEEeCCCChHhcceeccchHHHHHHHHH
Confidence 99876531 11 244566655544445554 665443 444555665544333445599999877766666
Q ss_pred HHcCCc
Q 015777 348 LSTDFS 353 (400)
Q Consensus 348 l~~g~~ 353 (400)
+....+
T Consensus 198 ~av~~d 203 (246)
T PF02110_consen 198 LAVAED 203 (246)
T ss_dssp HCCCSS
T ss_pred Hhcccc
Confidence 656555
No 83
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase. Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases.
Probab=97.77 E-value=0.0042 Score=62.40 Aligned_cols=153 Identities=13% Similarity=0.096 Sum_probs=91.1
Q ss_pred hhcCCccEEEEccccccCch---------hHHHHHHHHHHHhh-CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 201 SLITKAKIFHYGSISLITEP---------CKSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~---------~~~~~~~~~~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
++-..+|.++++|+.++.+. -.+...+.++..++ .++++.+.... +.+.+-....+..+++++|.+
T Consensus 205 ~i~~~~d~~vlSG~q~m~~~y~dg~~~~~~~er~~~~i~~L~~~~~i~iH~E~As----~~~~~l~~~i~~~ilp~vDSl 280 (446)
T TIGR02045 205 EIGEPVDGAILSGYQGIKEEYSDGKTAKYYLERAKEDIELLKKNKDLKIHVEFAS----IQNREIRKKVVTNIFPHVDSV 280 (446)
T ss_pred hhhhcccEEEEEchhhhhhhccCCccHhHHHHHHHHHHHHHhhCCCCeEEEEecc----cccHHHHHHHHHhhccccccc
Confidence 44567899999998765432 12233444555533 67899999864 344666666777899999999
Q ss_pred EcCHhHHhccc---CCCCC-----------cHHHHHHHHHh-CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCC
Q 015777 271 KISEEEISFLT---QGEDP-----------YDDAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATG 335 (400)
Q Consensus 271 ~~N~~E~~~l~---~~~~~-----------~~~~~~~~l~~-~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttG 335 (400)
-+||.|+..+. |.... +..+.+..+++ .|.+.+.|-. .+....+...
T Consensus 281 GMNE~ELa~ll~~lg~~~l~~~i~~~~~i~~vi~a~~~l~~~~~leri~vHT---------~~y~l~i~~~--------- 342 (446)
T TIGR02045 281 GMDEAEIANVLSVLGYDELSDRIFRYNRIEDLILGAKILLDELNLEVVQVHT---------IYYIMYITHA--------- 342 (446)
T ss_pred cCCHHHHHHHHHHhcCCchhhhhhccccHHHHHHHHHHHHHHcCCCEEEEEe---------cceeEEEecc---------
Confidence 99999999876 22111 11223344443 4666555431 1111111110
Q ss_pred chHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 336 AGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
+.+ .+...+++||.+|+.+||... ..|. +.++++++.-++
T Consensus 343 ---------------~~p--~~~~~~~~aL~f~~~~Aa~rA-~~G~---i~~~~d~~~~l~ 382 (446)
T TIGR02045 343 ---------------DNP--LSEEELRRSLEFSTILAATRA-SLGN---IENPDDAEAGLE 382 (446)
T ss_pred ---------------CCC--CCHHHHHHHHHHHHHHHHHHH-hcCC---CCCHHHHHHHhc
Confidence 100 112238999999999998776 5563 457777766544
No 84
>PRK14038 ADP-dependent glucokinase; Provisional
Probab=97.58 E-value=0.0043 Score=62.41 Aligned_cols=149 Identities=19% Similarity=0.223 Sum_probs=92.2
Q ss_pred hhcCCccEEEEccccccCchhH-H---HHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhH
Q 015777 201 SLITKAKIFHYGSISLITEPCK-S---AHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEE 276 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~-~---~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E 276 (400)
++....|.++++|+.++.+... + ...+.++..++.++++.++.... . ....+..+.++++.+|-+-+||.|
T Consensus 220 ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i~iH~EfAs~----~-d~~~r~~i~~ilp~vDSlGmNE~E 294 (453)
T PRK14038 220 EIAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGIPAHLEFAFT----P-DETVREEILGLLGKFYSVGLNEVE 294 (453)
T ss_pred hhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCceEEEEeecc----c-hHHHHHHHHhhCccccccccCHHH
Confidence 4556899999999876554322 2 22233444455688999998632 2 234566666799999999999999
Q ss_pred HhcccCCCCC-------------cH---HHHHHHHHh-CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHH
Q 015777 277 ISFLTQGEDP-------------YD---DAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDA 339 (400)
Q Consensus 277 ~~~l~~~~~~-------------~~---~~~~~~l~~-~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDa 339 (400)
+..+...-.. .. .+++.+|++ .|.+.+.|-. .+-+++ +..+
T Consensus 295 La~ll~~lg~~~l~~~i~~~~~~~~~~v~e~~~~L~~~~gleri~vHT--~~y~l~-------i~~~------------- 352 (453)
T PRK14038 295 LASIMEVMGEKTLAEKLLAKDPVDPIAVTEAMLKLAEKTGVKRIHFHT--YGYYLA-------LTKY------------- 352 (453)
T ss_pred HHHHHHHhccchhhhhhhhcCccCHHHHHHHHHHHHHHcCCCEEEEEe--cceeEE-------EecC-------------
Confidence 9988741110 11 233445554 4776655431 111111 1010
Q ss_pred HHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 340 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 340 F~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++.. +++||.+|..+||.... .|. +.+++++++.++-
T Consensus 353 ----------~~~~-------~~~aL~f~~~~AaarA~-~G~---i~~~~d~~~~l~v 389 (453)
T PRK14038 353 ----------RGEH-------VRDALLFAALAAAAKAM-LGN---IEKIDDVRKALDV 389 (453)
T ss_pred ----------CHHH-------HHHHHHHHHHHHHHHHH-cCC---CCCHHHHHHHhcC
Confidence 3334 99999999999998874 664 4678888776653
No 85
>PRK10565 putative carbohydrate kinase; Provisional
Probab=97.54 E-value=0.003 Score=65.43 Aligned_cols=146 Identities=12% Similarity=-0.004 Sum_probs=87.6
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHh--hhccCcEEEcCHhHHhc
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS--IWETADIIKISEEEISF 279 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~--ll~~~dvl~~N~~E~~~ 279 (400)
.++.++.+.++.-.... . ...++++.+++.++++++|+.. ...+.. ......|++||..|+..
T Consensus 317 ~~~~~~a~viGpGlg~~---~-~~~~~~~~~~~~~~P~VLDAda-----------L~ll~~~~~~~~~~VLTPh~gE~~r 381 (508)
T PRK10565 317 SLEWADVVVIGPGLGQQ---E-WGKKALQKVENFRKPMLWDADA-----------LNLLAINPDKRHNRVITPHPGEAAR 381 (508)
T ss_pred HhhcCCEEEEeCCCCCC---H-HHHHHHHHHHhcCCCEEEEchH-----------HHHHhhCccccCCeEECCCHHHHHH
Confidence 34667888776432222 2 2244456677788999999852 111111 01125799999999999
Q ss_pred ccCCCCCc----HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccc
Q 015777 280 LTQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLL 355 (400)
Q Consensus 280 l~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~ 355 (400)
|++..... ..+.++++.++....|++ .|..- ++.+.++..++...--...-++|.||++.|.+.+.+.++.+
T Consensus 382 L~~~~~~~v~~~~~~~a~~~a~~~~~~vvl-KG~~~-iI~~~~~~~~~~~~G~~~ma~~GsGDvLaGiIaalla~g~~-- 457 (508)
T PRK10565 382 LLGCSVAEIESDRLLSARRLVKRYGGVVVL-KGAGT-VIAAEPDALAIIDVGNAGMASGGMGDVLSGIIGALLGQKLS-- 457 (508)
T ss_pred HhCCChhhhhhhHHHHHHHHHHHhCCEEEE-eCCCc-EEEcCCceEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCC--
Confidence 99854322 123445555544344555 45533 44443333333332234455699999999988888888888
Q ss_pred cchHHHHHHHHHHHHH
Q 015777 356 QKEDQLRDALRFANAC 371 (400)
Q Consensus 356 ~~~~~l~~al~~A~a~ 371 (400)
+.+|+..|+..
T Consensus 458 -----~~~Aa~~a~~l 468 (508)
T PRK10565 458 -----PYDAACAGCVA 468 (508)
T ss_pred -----HHHHHHHHHHH
Confidence 78888877743
No 86
>COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]
Probab=97.43 E-value=0.0089 Score=55.42 Aligned_cols=159 Identities=16% Similarity=0.043 Sum_probs=89.3
Q ss_pred CCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-
Q 015777 187 PSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE- 265 (400)
Q Consensus 187 ~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~- 265 (400)
.++-|...+++.. ++.+-++.+.+.--. ......+.+..+.+.+++.|.|+++||..... ...-++...+++.
T Consensus 38 aSP~Ma~~~eE~~-e~~kia~AL~INIGT-L~~~~~~~m~~A~~~An~~~~PvvLDPVgvgA----t~~R~~~~~~LL~~ 111 (265)
T COG2145 38 ASPVMADAPEEVE-EFAKIADALLINIGT-LSAERIQAMRAAIKAANESGKPVVLDPVGVGA----TKFRTKFALELLAE 111 (265)
T ss_pred CCchhccCHHHHH-HHHHhccceEEeecc-CChHHHHHHHHHHHHHHhcCCCEEecCccCCc----hHHHHHHHHHHHHh
Confidence 3444444555543 454555555432211 23344677888899999999999999964322 1112334445555
Q ss_pred -cCcEEEcCHhHHhcccCCCCC--------cH---HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCC
Q 015777 266 -TADIIKISEEEISFLTQGEDP--------YD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDA 333 (400)
Q Consensus 266 -~~dvl~~N~~E~~~l~~~~~~--------~~---~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDt 333 (400)
+.++++.|..|...|.|.... .. .+.++.+.... ..+++-.|+.-. +.++++.+.+.--.--.-.-
T Consensus 112 ~~~~~IrGN~sEI~~Lag~~~~~kGVDa~~~~~~~~~~a~~~A~~~-~~vvvvTG~vD~-Isdg~~~~~i~nG~pll~~I 189 (265)
T COG2145 112 VKPAAIRGNASEIAALAGEAGGGKGVDAGDGAADAIEAAKKAAQKY-GTVVVVTGEVDY-ISDGTRVVVIHNGSPLLGKI 189 (265)
T ss_pred cCCcEEeccHHHHHHHhcccccccccccccchhhHHHHHHHHHHHh-CcEEEEECCeeE-EEcCCeEEEEECCCcHHhhh
Confidence 479999999999999854321 11 12233333322 244444466443 23444444443332234455
Q ss_pred CCchHHHHHHHHHHHHcCCc
Q 015777 334 TGAGDAFVAGILSQLSTDFS 353 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~g~~ 353 (400)
||+|+...|-..+.+....+
T Consensus 190 tGtGCllgav~aaF~av~~d 209 (265)
T COG2145 190 TGTGCLLGAVVAAFLAVEKD 209 (265)
T ss_pred hccccHHHHHHHHHHhcCCC
Confidence 99998876666555555554
No 87
>PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ]. ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A.
Probab=97.43 E-value=0.0025 Score=64.74 Aligned_cols=78 Identities=13% Similarity=0.194 Sum_probs=49.7
Q ss_pred hhcCCccEEEEccccccCc-----hh----HHHHHHHHHHHh-hCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 201 SLITKAKIFHYGSISLITE-----PC----KSAHIAAAKAAK-DAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~-----~~----~~~~~~~~~~a~-~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
+...+.|.++++|+.++.+ .. .+.+.+.++..+ ..++++.++... +.+.+-.+..+..+++++|.+
T Consensus 205 ~~~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~l~~~~~~~iH~E~As----~~d~~l~~~i~~~ilp~vDSl 280 (444)
T PF04587_consen 205 EIAFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKLLKSNPDIPIHLELAS----FADEELRKEILEKILPHVDSL 280 (444)
T ss_dssp HHHTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHHHH-HTT-EEEEE--------SSHHHHHHHHHHHGGGSSEE
T ss_pred hhccCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHhccCCCCCceEEEecc----ccCHHHHHHHHHHhhcccccc
Confidence 3456799999999987653 11 222333344555 688999999864 345666667777899999999
Q ss_pred EcCHhHHhcccC
Q 015777 271 KISEEEISFLTQ 282 (400)
Q Consensus 271 ~~N~~E~~~l~~ 282 (400)
-+||.|+..+..
T Consensus 281 GmNEqEL~~l~~ 292 (444)
T PF04587_consen 281 GMNEQELANLLS 292 (444)
T ss_dssp EEEHHHHHHHHH
T ss_pred ccCHHHHHHHHH
Confidence 999999998753
No 88
>PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase. Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A ....
Probab=97.32 E-value=0.011 Score=55.34 Aligned_cols=169 Identities=12% Similarity=0.025 Sum_probs=100.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHh---hhccCcEEEcCHhHH
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS---IWETADIIKISEEEI 277 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~---ll~~~dvl~~N~~E~ 277 (400)
+.++++|.+.++.- +... . ...++++...+...++++|.. . ...+.. .....-|++|+..|+
T Consensus 63 ~~~~~~~av~iGPG-lg~~--~-~~~~~~~~~~~~~~p~VlDAD----------a-L~~l~~~~~~~~~~~IlTPH~gE~ 127 (242)
T PF01256_consen 63 ELLEKADAVVIGPG-LGRD--E-ETEELLEELLESDKPLVLDAD----------A-LNLLAENPKKRNAPVILTPHPGEF 127 (242)
T ss_dssp HHHCH-SEEEE-TT--SSS--H-HHHHHHHHHHHHCSTEEEECH----------H-HHCHHHCCCCSSSCEEEE-BHHHH
T ss_pred hhhccCCEEEeecC-CCCc--h-hhHHHHHHHHhhcceEEEehH----------H-HHHHHhccccCCCCEEECCCHHHH
Confidence 45678999988753 2222 1 223355555566778999963 1 122222 345678999999999
Q ss_pred hcccCCCCC---cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 278 SFLTQGEDP---YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 278 ~~l~~~~~~---~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
..|++.... +..+.++++.+..- .+++=.|..-.++..+++.+..+.- -.-.-+-|.||.+.+-+..-+.++.+
T Consensus 128 ~rL~~~~~~~~~~~~~~a~~~a~~~~-~~vvLKG~~t~I~~p~~~~~~n~~g-n~~la~gGsGDvLaGii~~llaq~~~- 204 (242)
T PF01256_consen 128 ARLLGKSVEIQEDRIEAAREFAKEYG-AVVVLKGAVTIIASPGGRVYVNPTG-NPGLATGGSGDVLAGIIAGLLAQGYD- 204 (242)
T ss_dssp HHHHTTTCHHCCSHHHHHHHHHHHHT-SEEEEESTSSEEEEETSEEEEE-----GGGSSTTHHHHHHHHHHHHHHHTSS-
T ss_pred HHHhCCcccchhhHHHHHHHHHhhcC-cEEEEeCCCcEEEecCcceeEeCCC-CCCCCCCCcccHHHHHHHHHHHccCC-
Confidence 999998762 33445555554322 2455557766665556666554433 24456789999999888888889998
Q ss_pred ccchHHHHHHHHHHHHH---HHHHhcccCCCCCCCCHHHHHHHH
Q 015777 355 LQKEDQLRDALRFANAC---GALTVMERGAIPALPTREAVLNAI 395 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~---Aa~~v~~~G~~~~~p~~~~l~~~l 395 (400)
+.+|+..|... |+..+...... ++ ...||-+.+
T Consensus 205 ------~~~Aa~~av~lHg~Ag~~~~~~~~~-~~-~a~dli~~i 240 (242)
T PF01256_consen 205 ------PFEAACLAVYLHGRAGDLAAEKYGR-GM-LASDLIDNI 240 (242)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHCTTCSS-C---HHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHhCCC-cC-cHHHHHHhc
Confidence 88888887643 33333333322 33 566776655
No 89
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=96.92 E-value=0.014 Score=53.93 Aligned_cols=141 Identities=12% Similarity=0.076 Sum_probs=88.9
Q ss_pred hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 200 LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 200 ~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.++++-..++++.-.-.++.....+..++++++++++|+++|... +|--.+.....+.. . ..-|+.||.-|+..
T Consensus 96 ~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaDG---L~Lv~q~~e~l~~~-~-~~viLTPNvvEFkR 170 (306)
T KOG3974|consen 96 EKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDADG---LWLVEQLPERLIGG-Y-PKVILTPNVVEFKR 170 (306)
T ss_pred HHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCc---eEehhhchhhhhcc-C-ceeeeCCcHHHHHH
Confidence 3567788888887644345556777889999999999999999852 34211111111111 1 23578999999999
Q ss_pred ccCC--CCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHH
Q 015777 280 LTQG--EDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 280 l~~~--~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
|++. ...+....+..|...-....++-.|+.-.++..+.+....+. .-...-.-|-||...+.+..
T Consensus 171 Lcd~~l~~~d~~~~~~~L~~~l~nv~vvqKG~~D~ils~~~ev~~~s~-eGs~kRcGGQGDiLaGsla~ 238 (306)
T KOG3974|consen 171 LCDAELDKVDSHSQMQHLAAELMNVTVVQKGESDKILSPDSEVRVCST-EGSLKRCGGQGDILAGSLAT 238 (306)
T ss_pred HHHHhhccccchHHHHHHHHHhcCeEEEEecCCceeeCCCCeeEEccC-CCCccccCCCcchhhhHHHH
Confidence 9987 333333444555544455677777887765554444433332 23344557899998876543
No 90
>cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK). ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers.
Probab=96.75 E-value=0.0097 Score=60.25 Aligned_cols=163 Identities=12% Similarity=0.125 Sum_probs=91.1
Q ss_pred ceecCCChHHHHHHHHHHcCC-CceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCc
Q 015777 88 FKKAPGGAPANVAVGIARLGG-SSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGART 166 (400)
Q Consensus 88 ~~~~~GG~~~N~A~~larLG~-~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t 166 (400)
...+.||.+.-+|..++++|. +|.+.+. +... .....+.+.+|-.-...- .....
T Consensus 101 ~~~~mGGnAgimAn~la~~g~~~Vil~~p-------------------~~~k----~~~~L~~d~~i~~p~~e~-~~~~d 156 (445)
T cd01938 101 DELRMGGNAGLMANRLAGEGDLKVLLGVP-------------------QSSK----LQAELFLDGPIVVPTFEN-LIEED 156 (445)
T ss_pred ceEEeCChHHHHHHHHHhcCCceEEEecC-------------------CCcH----HHHHhCCCCCeeeccccc-CCCCC
Confidence 468999999999999999999 7666665 3332 112222211221110000 01122
Q ss_pred eEEEEEEcCCCC----------eeEEEe-cCCCccccCCccccchhhcCC-ccEEEEccccccCchh--HHHHHHH----
Q 015777 167 ALAFVTLRSDGE----------REFMFY-RNPSADMLLQEAELDLSLITK-AKIFHYGSISLITEPC--KSAHIAA---- 228 (400)
Q Consensus 167 ~~~~i~~~~~g~----------r~~~~~-~~~~~~~~l~~~~l~~~~i~~-~~~v~~~~~~~~~~~~--~~~~~~~---- 228 (400)
-..+|+-.+.|+ ++|++. +..+. . ...+++..++.+. .|.++++|+-++.+.. ..+..+.
T Consensus 157 ~IHlIlEy~~G~~~~~~~aPraNRfI~~~d~~n~-l-~~~ee~~~~i~~~~pDl~vlSGlqmm~~~~~~~~~~~~~l~~~ 234 (445)
T cd01938 157 EIHLILEYPRGESWGDFVAPRANRFIFHDDDNNP-M-LMREEFFSSILEFQPDLAVLSGLQMMEGQSFDEGTRKELLERV 234 (445)
T ss_pred ccEEEEEcCCCCEecceEcCCCCeEEEecCCcch-h-hhhHHHHHHHhhcCCCEEEEechhhhcccCCChhhHHHHHHHH
Confidence 233333223333 233333 22222 2 2223333345554 8999999987654421 1122222
Q ss_pred ---HHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 229 ---AKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 229 ---~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
++..+ ..+++.++... +.+.+-..+.+..+++++|-+-+||.|+..+.
T Consensus 235 ~~~l~~l~-~~i~iH~E~As----~~d~~l~~~i~~~ilp~VDSlGmNEqEL~~l~ 285 (445)
T cd01938 235 KSILEILP-PLIPIHLELAS----TVDEELREEILHEVVPYVDSLGLNEQELANLL 285 (445)
T ss_pred HHHHHhcc-ccCcEEEEecc----cccHHHHHHHHHHhcccccccccCHHHHHHHH
Confidence 22222 34889998864 34566667777789999999999999998886
No 91
>COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=96.61 E-value=0.11 Score=49.57 Aligned_cols=174 Identities=13% Similarity=0.026 Sum_probs=90.9
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCC-CeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~ 278 (400)
...+++|.+.++.-.-..+-..+.+.++ -+.. +++++|...- ........+.. .--|+.|+..|++
T Consensus 97 ~~~~~~~avviGpGlG~~~~~~~~~~~~----l~~~~~p~ViDADaL--------~~la~~~~~~~~~~~VlTPH~gEf~ 164 (284)
T COG0063 97 ELVERADAVVIGPGLGRDAEGQEALKEL----LSSDLKPLVLDADAL--------NLLAELPDLLDERKVVLTPHPGEFA 164 (284)
T ss_pred hhhccCCEEEECCCCCCCHHHHHHHHHH----HhccCCCEEEeCcHH--------HHHHhCcccccCCcEEECCCHHHHH
Confidence 3456788888874222222223333333 3333 8999997420 11111112222 2378899999999
Q ss_pred cccCCCCCc----HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 279 FLTQGEDPY----DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 279 ~l~~~~~~~----~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
.|++...++ ..+.++.+.++. ..+||=.|..-.+...+++.+..+.- -.-.-+=|.||+..+-+.+-|.++ ..
T Consensus 165 rL~g~~~~~~~~~r~~~a~~~a~~~-~~vvVLKG~~tvI~~~~g~~~~n~~G-~~~ma~GGtGDvLaGii~alLAq~-~~ 241 (284)
T COG0063 165 RLLGTEVDEIEVDRLEAARELAAKY-GAVVVLKGAVTVIADPDGEVFVNPTG-NPGMATGGTGDVLAGIIGALLAQG-PA 241 (284)
T ss_pred HhcCCcccccccchHHHHHHHHHHc-CCEEEEeCCCCEEEcCCCcEEEcCCC-CHHhccCcchHHHHHHHHHHHhCC-CC
Confidence 999854332 234455555443 33455556655544433344333221 123345699999877655555666 30
Q ss_pred ccchHHHHHHHHHHHH---HHH-HHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 355 LQKEDQLRDALRFANA---CGA-LTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a---~Aa-~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++.+|+..|+. .|+ +.-...| + .+..|+.+.+.++
T Consensus 242 -----~~~~Aa~~g~~~h~~ag~la~~~~g---~-~~a~Dl~~~ip~~ 280 (284)
T COG0063 242 -----DPLEAAAAGAWLHGRAGELAAKKHG---G-LTATDLIEAIPRA 280 (284)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHhhccC---C-CCHHHHHHHHHHH
Confidence 25566655543 333 3333334 2 4667777766554
No 92
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=85.71 E-value=5.1 Score=36.62 Aligned_cols=75 Identities=9% Similarity=0.033 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE-----cCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-----ISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~-----~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
.+.+.++++.+++.|+.+.+|.+...+ .+.+.++++.+|.+. ++.+..+.++|......-+.++.+.
T Consensus 53 ~~fl~~l~~~~k~~gi~~~leTnG~~~--------~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG~~~~~il~nl~~l~ 124 (213)
T PRK10076 53 AEFATRFLQRLRLWGVSCAIETAGDAP--------ASKLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLV 124 (213)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCC--------HHHHHHHHHhcCEEEEeeccCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 456778999999999999999986433 234455566666554 4677777888876543334456666
Q ss_pred hCCCcEEE
Q 015777 297 HANLKLLL 304 (400)
Q Consensus 297 ~~g~~~vv 304 (400)
+.|....+
T Consensus 125 ~~g~~v~i 132 (213)
T PRK10076 125 SEGVNVIP 132 (213)
T ss_pred hCCCcEEE
Confidence 77765443
No 93
>KOG4184 consensus Predicted sugar kinase [Carbohydrate transport and metabolism; General function prediction only]
Probab=77.71 E-value=6.3 Score=38.39 Aligned_cols=74 Identities=14% Similarity=0.220 Sum_probs=46.7
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhh------CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHh
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKD------AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEIS 278 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~------~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~ 278 (400)
+.|+++++|+.+..-...+.-.+-++..+. .|+++-++... ..+.+...+.+..++|++|=+-+||.|+.
T Consensus 238 qPdLvVvsGlhmme~qske~r~~rl~~V~r~L~~iP~gip~HlElaS----~~~~~l~~~i~h~VlPyVdSLGlNEQEL~ 313 (478)
T KOG4184|consen 238 QPDLVVVSGLHMMEMQSKEEREARLQQVVRSLSDIPTGIPVHLELAS----MTNRELMSSIVHQVLPYVDSLGLNEQELL 313 (478)
T ss_pred CCCEEEEechhHHhhhhHHHHHHHHHHHHHHHhcCCCCCchhhhHhH----HHHHHHHHHHHHHhhhhccccCCCHHHHH
Confidence 468888888766443333322222222221 47788877642 22344445555668999999999999999
Q ss_pred cccC
Q 015777 279 FLTQ 282 (400)
Q Consensus 279 ~l~~ 282 (400)
.|+.
T Consensus 314 fL~q 317 (478)
T KOG4184|consen 314 FLTQ 317 (478)
T ss_pred HHHH
Confidence 8874
No 94
>COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism]
Probab=74.35 E-value=42 Score=33.41 Aligned_cols=80 Identities=11% Similarity=0.030 Sum_probs=53.4
Q ss_pred hhcCCccEEEEccccccCc-----hh----HHHHHHHHHHHhh-CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 201 SLITKAKIFHYGSISLITE-----PC----KSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~-----~~----~~~~~~~~~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
++....|...++|+....+ .. .+...+-++..++ .++++.++.... .+..-.+..+..+++.++=+
T Consensus 221 ~i~~~vDgaiiSGyq~l~eey~dg~t~~~yle~s~e~i~~lk~~~~irvHlEfas~----~d~~irk~i~~~il~~v~Sv 296 (466)
T COG4809 221 EIAKEVDGAIISGYQGLKEEYSDGSTYKYYLERSREDIKALKDRENIRVHLEFASI----QDRKIRKEILTNILSIVYSV 296 (466)
T ss_pred HHhhhcceeeeechhhhhhhcCCCCcHHHHHHHHHHHHHHHhccccceEEEEeccc----ccHHHHHHHHHHHHhhhhhc
Confidence 4556688888888765322 11 2223344556666 788999988642 34555556666789999999
Q ss_pred EcCHhHHhcccCCC
Q 015777 271 KISEEEISFLTQGE 284 (400)
Q Consensus 271 ~~N~~E~~~l~~~~ 284 (400)
=+|+.|+..+...-
T Consensus 297 GldE~ElA~vl~vl 310 (466)
T COG4809 297 GLDEVELANVLNVL 310 (466)
T ss_pred CCCHHHHHHHHHhh
Confidence 99999998876543
No 95
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=73.00 E-value=24 Score=33.27 Aligned_cols=90 Identities=16% Similarity=0.115 Sum_probs=56.1
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE-----cCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-----ISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~-----~N~~E~~~ 279 (400)
..+-|.+++- -..+..+.+.++++.+++.|+.+.+|.+.... . +...++++..|.+. .+++..+.
T Consensus 83 ~~~gvt~SGG--EP~~q~e~~~~~~~~ake~Gl~~~l~TnG~~~----~----~~~~~l~~~~D~v~~DlK~~~~~~y~~ 152 (260)
T COG1180 83 SGGGVTFSGG--EPTLQAEFALDLLRAAKERGLHVALDTNGFLP----P----EALEELLPLLDAVLLDLKAFDDELYRK 152 (260)
T ss_pred CCCEEEEECC--cchhhHHHHHHHHHHHHHCCCcEEEEcCCCCC----H----HHHHHHHhhcCeEEEeeccCChHHHHH
Confidence 4565554331 11134677889999999999999999986543 2 22344555566654 45555888
Q ss_pred ccCCCCCcHHHHHHHHHhCCCcEEE
Q 015777 280 LTQGEDPYDDAVVYKLFHANLKLLL 304 (400)
Q Consensus 280 l~~~~~~~~~~~~~~l~~~g~~~vv 304 (400)
+++......-+.++.+.+.|+...+
T Consensus 153 ~tg~~~~~vl~~~~~l~~~g~~ve~ 177 (260)
T COG1180 153 LTGADNEPVLENLELLADLGVHVEI 177 (260)
T ss_pred HhCCCcHHHHHHHHHHHcCCCeEEE
Confidence 8888774434455566666655433
No 96
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=71.30 E-value=72 Score=28.03 Aligned_cols=59 Identities=25% Similarity=0.395 Sum_probs=44.1
Q ss_pred eeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCcee----cCCCCceEEEEEEcCCCCeeEEEe
Q 015777 125 VKVIILPCPKVGADEFGYMLADILKENNVNGAGMRF----DPGARTALAFVTLRSDGEREFMFY 184 (400)
Q Consensus 125 ~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~----~~~~~t~~~~i~~~~~g~r~~~~~ 184 (400)
.++.+-++|.+|+-..-..+.+.|++.|.++-++.. ..+.++|+.++.++ +|++.++-+
T Consensus 6 mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR~GF~Ivdl~-tg~~~~la~ 68 (179)
T COG1618 6 MKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKRIGFKIVDLA-TGEEGILAR 68 (179)
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeEeeeEEEEcc-CCceEEEEE
Confidence 456667778899988899999999999887776643 45778888888875 466555443
No 97
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=65.66 E-value=56 Score=28.82 Aligned_cols=83 Identities=18% Similarity=0.165 Sum_probs=58.2
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhc---cc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF---LT 281 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~---l~ 281 (400)
+++.+...|..+ ..+++..+.+..+.+|+.|+.||.+ .++..+..+.+.+|.+-..++...++.. -.
T Consensus 22 d~~~I~T~Gs~i----~~~~i~~i~~~~~~rgVIIfTDpD~------~GekIRk~i~~~vp~~khafi~~~~a~~~~~~i 91 (174)
T TIGR00334 22 DVDVIETNGSAL----KDETINLIKKAQKKQGVIILTDPDF------PGEKIRKKIEQHLPGYENCFIPKHLAKPNKKKI 91 (174)
T ss_pred CceEEEECCCcc----CHHHHHHHHHHhhcCCEEEEeCCCC------chHHHHHHHHHHCCCCeEEeeeHHhcCcCCCCc
Confidence 478888777543 3456666666677889999999974 3678888888888989999999988753 23
Q ss_pred CCCCCcHHHHHHHHHh
Q 015777 282 QGEDPYDDAVVYKLFH 297 (400)
Q Consensus 282 ~~~~~~~~~~~~~l~~ 297 (400)
|....+.++..+.|..
T Consensus 92 GVE~As~e~I~~AL~~ 107 (174)
T TIGR00334 92 GVEEASVEAIIAALEN 107 (174)
T ss_pred ccCCCCHHHHHHHHHH
Confidence 4444445555555543
No 98
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=64.77 E-value=51 Score=33.58 Aligned_cols=43 Identities=26% Similarity=0.176 Sum_probs=27.5
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhH
Q 015777 225 HIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEE 276 (400)
Q Consensus 225 ~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E 276 (400)
+.++.+.|+++|+++++|-....+. ..+.+-..+||++-+...
T Consensus 166 i~~I~~iA~~~gi~livD~T~~tP~---------~~~pl~~GADIvv~S~TK 208 (432)
T PRK06702 166 FKEFSDAAKELEVPFIVDNTLATPY---------LCQAFEHGANIIVHSTTK 208 (432)
T ss_pred HHHHHHHHHHcCCEEEEECCCCchh---------hCChhhcCCCEEEEcccc
Confidence 5677888999999999997643221 111122358887766543
No 99
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=53.30 E-value=49 Score=31.07 Aligned_cols=98 Identities=17% Similarity=0.216 Sum_probs=65.2
Q ss_pred hhcCCccEEEEccccccC-------c------hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccC
Q 015777 201 SLITKAKIFHYGSISLIT-------E------PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETA 267 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~-------~------~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~ 267 (400)
+.++++++++.+|+++.. . ...+.+..+++.+.+.+.+|++=-+- +. ..+.....+...++..
T Consensus 60 ~~i~~A~li~pDG~gvV~~ar~~~g~~~~~rv~G~Dl~~~Ll~~a~~~~~~vfllGgk-p~---V~~~a~~~l~~~~p~l 135 (253)
T COG1922 60 EILNQADLILPDGIGVVRAARRLLGQPLPERVAGTDLVEALLKRAAEEGKRVFLLGGK-PG---VAEQAAAKLRAKYPGL 135 (253)
T ss_pred HHHhhcCEEccCchhHHHHHHHHhCccCcccCChHHHHHHHHHHhCccCceEEEecCC-HH---HHHHHHHHHHHHCCCc
Confidence 678889999988876411 1 12567888999999988988885331 11 1345555666666777
Q ss_pred cEEEcCHhHHhcccCCCCCcH-HHHHHHHHhCCCcEEEEEecC
Q 015777 268 DIIKISEEEISFLTQGEDPYD-DAVVYKLFHANLKLLLVTEGP 309 (400)
Q Consensus 268 dvl~~N~~E~~~l~~~~~~~~-~~~~~~l~~~g~~~vvvT~G~ 309 (400)
+|+-...--+ .+++ +..++++...+.+.++|-+|.
T Consensus 136 ~ivg~h~GYf-------~~~e~~~i~~~I~~s~pdil~VgmG~ 171 (253)
T COG1922 136 KIVGSHDGYF-------DPEEEEAIVERIAASGPDILLVGMGV 171 (253)
T ss_pred eEEEecCCCC-------ChhhHHHHHHHHHhcCCCEEEEeCCC
Confidence 7776654322 1222 356678888899999998886
No 100
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=50.81 E-value=85 Score=27.70 Aligned_cols=77 Identities=9% Similarity=0.002 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+.+..+++.+.+++.++++=-+. +. ..+.+.+.+.+-++..+++-.+ -.+ ...++++.++.+.+.+.+
T Consensus 34 ~dl~~~l~~~~~~~~~~vfllG~~-~~---v~~~~~~~l~~~yP~l~i~g~~-----g~f--~~~~~~~i~~~I~~s~~d 102 (177)
T TIGR00696 34 PDLMEELCQRAGKEKLPIFLYGGK-PD---VLQQLKVKLIKEYPKLKIVGAF-----GPL--EPEERKAALAKIARSGAG 102 (177)
T ss_pred HHHHHHHHHHHHHcCCeEEEECCC-HH---HHHHHHHHHHHHCCCCEEEEEC-----CCC--ChHHHHHHHHHHHHcCCC
Confidence 466778888888888777764321 10 1233444555555566655431 111 112224456777778888
Q ss_pred EEEEEecC
Q 015777 302 LLLVTEGP 309 (400)
Q Consensus 302 ~vvvT~G~ 309 (400)
.++|-+|.
T Consensus 103 il~VglG~ 110 (177)
T TIGR00696 103 IVFVGLGC 110 (177)
T ss_pred EEEEEcCC
Confidence 88888775
No 101
>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0
Probab=45.87 E-value=1.2e+02 Score=28.65 Aligned_cols=74 Identities=15% Similarity=0.101 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE-----cCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-----ISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~-----~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
++.+.++++++++.|..+.++.+.... . +.+.++++..|++. .+++....+.|.......+.++.+.
T Consensus 140 ~~~l~~l~~~~k~~g~~~~i~TnG~~~----~----~~~~~ll~~~d~~~isl~~~~~~~~~~~~g~~~~~vl~~i~~l~ 211 (295)
T TIGR02494 140 PEFALALLQACHERGIHTAVETSGFTP----W----ETIEKVLPYVDLFLFDIKHLDDERHKEVTGVDNEPILENLEALA 211 (295)
T ss_pred HHHHHHHHHHHHHcCCcEeeeCCCCCC----H----HHHHHHHhhCCEEEEeeccCChHHHHHHhCCChHHHHHHHHHHH
Confidence 344568889999999999998875321 1 23344555666654 3555556666654322223445666
Q ss_pred hCCCcEE
Q 015777 297 HANLKLL 303 (400)
Q Consensus 297 ~~g~~~v 303 (400)
+.+.+..
T Consensus 212 ~~~~~~~ 218 (295)
T TIGR02494 212 AAGKNVV 218 (295)
T ss_pred hCCCcEE
Confidence 6665443
No 102
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=42.39 E-value=1.8e+02 Score=28.67 Aligned_cols=47 Identities=21% Similarity=0.198 Sum_probs=30.2
Q ss_pred ceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCC
Q 015777 88 FKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNG 155 (400)
Q Consensus 88 ~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~ 155 (400)
.--.|||+....|..+..-|..+..+=. +..-.+.+.+.+++.|+..
T Consensus 163 ~cAAPGGKTthla~~~~~~~~iV~A~D~---------------------~~~Rl~~l~~nl~RlG~~n 209 (355)
T COG0144 163 LCAAPGGKTTHLAELMENEGAIVVAVDV---------------------SPKRLKRLRENLKRLGVRN 209 (355)
T ss_pred ECCCCCCHHHHHHHhcCCCCceEEEEcC---------------------CHHHHHHHHHHHHHcCCCc
Confidence 3457999987766555543433333222 2246778899999999986
No 103
>PRK15452 putative protease; Provisional
Probab=40.74 E-value=1.5e+02 Score=30.42 Aligned_cols=82 Identities=11% Similarity=0.008 Sum_probs=46.7
Q ss_pred cccchhhcCCccEEEEcccccc-----CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcE
Q 015777 196 AELDLSLITKAKIFHYGSISLI-----TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADI 269 (400)
Q Consensus 196 ~~l~~~~i~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dv 269 (400)
+.+...+-.++|.|++++-... .+...+.+.+++++++++|+++++-.+.... ...-+.+.+.+..+.. .+|-
T Consensus 14 e~l~aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt~n~i~~-e~el~~~~~~l~~l~~~gvDg 92 (443)
T PRK15452 14 KNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVVNIAPH-NAKLKTFIRDLEPVIAMKPDA 92 (443)
T ss_pred HHHHHHHHCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEEecCcCC-HHHHHHHHHHHHHHHhCCCCE
Confidence 4444456678999999653221 1223466888899999999999987663222 0111233333444333 3775
Q ss_pred EEcC-HhHHh
Q 015777 270 IKIS-EEEIS 278 (400)
Q Consensus 270 l~~N-~~E~~ 278 (400)
+++. ...+.
T Consensus 93 vIV~d~G~l~ 102 (443)
T PRK15452 93 LIMSDPGLIM 102 (443)
T ss_pred EEEcCHHHHH
Confidence 5554 44443
No 104
>COG0269 SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
Probab=39.95 E-value=1.7e+02 Score=26.85 Aligned_cols=95 Identities=16% Similarity=0.052 Sum_probs=54.7
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
.-..+||+.+.+.. +.++...+++.+++.|+.+.+|.-.. |+ .+.....+++ -.+|++..-..-=.+..
T Consensus 77 ~~aGAd~~tV~g~A-----~~~TI~~~i~~A~~~~~~v~iDl~~~---~~-~~~~~~~l~~--~gvd~~~~H~g~D~q~~ 145 (217)
T COG0269 77 FEAGADWVTVLGAA-----DDATIKKAIKVAKEYGKEVQIDLIGV---WD-PEQRAKWLKE--LGVDQVILHRGRDAQAA 145 (217)
T ss_pred HHcCCCEEEEEecC-----CHHHHHHHHHHHHHcCCeEEEEeecC---CC-HHHHHHHHHH--hCCCEEEEEecccHhhc
Confidence 34588998765542 35688899999999999999998432 22 2222333332 25666554332222235
Q ss_pred CCCCC-cHHHHHHHHHhCCCcEEEEEec
Q 015777 282 QGEDP-YDDAVVYKLFHANLKLLLVTEG 308 (400)
Q Consensus 282 ~~~~~-~~~~~~~~l~~~g~~~vvvT~G 308 (400)
|.... +.-+.++++.+.|.+ +-|+-|
T Consensus 146 G~~~~~~~l~~ik~~~~~g~~-vAVaGG 172 (217)
T COG0269 146 GKSWGEDDLEKIKKLSDLGAK-VAVAGG 172 (217)
T ss_pred CCCccHHHHHHHHHhhccCce-EEEecC
Confidence 66552 333445666666644 555544
No 105
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=37.68 E-value=1.3e+02 Score=26.11 Aligned_cols=79 Identities=10% Similarity=0.136 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCCCc
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHANLK 301 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~ 301 (400)
.+.+.++++.+.+.+.++++=-+.. ...+.+.+.+.+..+..+++-...-.. +..+.++.++.+.+.+.+
T Consensus 34 ~dl~~~l~~~~~~~~~~ifllG~~~----~~~~~~~~~l~~~yP~l~ivg~~~g~f------~~~~~~~i~~~I~~~~pd 103 (172)
T PF03808_consen 34 SDLFPDLLRRAEQRGKRIFLLGGSE----EVLEKAAANLRRRYPGLRIVGYHHGYF------DEEEEEAIINRINASGPD 103 (172)
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCH----HHHHHHHHHHHHHCCCeEEEEecCCCC------ChhhHHHHHHHHHHcCCC
Confidence 4556677777777777666643210 012333344444455555543222111 112234556677777777
Q ss_pred EEEEEecCC
Q 015777 302 LLLVTEGPD 310 (400)
Q Consensus 302 ~vvvT~G~~ 310 (400)
.|+|-+|.-
T Consensus 104 iv~vglG~P 112 (172)
T PF03808_consen 104 IVFVGLGAP 112 (172)
T ss_pred EEEEECCCC
Confidence 777777753
No 106
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=35.94 E-value=53 Score=24.32 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=34.0
Q ss_pred HHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCC
Q 015777 96 PANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNG 155 (400)
Q Consensus 96 ~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~ 155 (400)
|.=.|..++++|.+++++.....+- | .+.. ...+.+.+.|++.||+.
T Consensus 11 g~E~A~~l~~~g~~vtli~~~~~~~----------~--~~~~-~~~~~~~~~l~~~gV~v 57 (80)
T PF00070_consen 11 GIELAEALAELGKEVTLIERSDRLL----------P--GFDP-DAAKILEEYLRKRGVEV 57 (80)
T ss_dssp HHHHHHHHHHTTSEEEEEESSSSSS----------T--TSSH-HHHHHHHHHHHHTTEEE
T ss_pred HHHHHHHHHHhCcEEEEEeccchhh----------h--hcCH-HHHHHHHHHHHHCCCEE
Confidence 6778899999999999988721111 1 0233 57888899999998874
No 107
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=34.42 E-value=2.9e+02 Score=25.24 Aligned_cols=75 Identities=16% Similarity=0.077 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEc-----CHhHHhcccCCCCCcHHHHHHHHH
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI-----SEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~-----N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
.+.+.++++.+++.|+.+.++.+.....+ .+.+.++++.+|.+.+ +++....++|......-+.++.+.
T Consensus 85 ~~~~~~l~~~~k~~g~~i~l~TNG~~~~~------~~~~~~ll~~~d~v~islk~~~~e~~~~~~g~~~~~~l~~i~~l~ 158 (246)
T PRK11145 85 AEFVRDWFRACKKEGIHTCLDTNGFVRRY------DPVIDELLDVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFARYLA 158 (246)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcc------hHHHHHHHHhCCEEEECCCcCChhhcccccCCChHHHHHHHHHHH
Confidence 44556888999999999999987543211 1334445556776554 344445566643322222334556
Q ss_pred hCCCcE
Q 015777 297 HANLKL 302 (400)
Q Consensus 297 ~~g~~~ 302 (400)
+.|.+.
T Consensus 159 ~~g~~v 164 (246)
T PRK11145 159 KRNQKT 164 (246)
T ss_pred hCCCcE
Confidence 666554
No 108
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=34.36 E-value=3.6e+02 Score=24.54 Aligned_cols=46 Identities=20% Similarity=0.193 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCc
Q 015777 98 NVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGM 158 (400)
Q Consensus 98 N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v 158 (400)
-.+.+|..+|.++.-++.-|++| .|.+.+-+ .++.|++.|+...+.
T Consensus 68 ~~~~~L~~~G~d~~tlaNNH~fD--------------~G~~gl~~-t~~~l~~~~i~~~g~ 113 (239)
T cd07381 68 EVADALKAAGFDVVSLANNHTLD--------------YGEEGLLD-TLDALDEAGIAHAGA 113 (239)
T ss_pred HHHHHHHHhCCCEEEcccccccc--------------cchHHHHH-HHHHHHHcCCceeEC
Confidence 46778999999998888668888 88765443 456788888875433
No 109
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=33.60 E-value=2.5e+02 Score=28.54 Aligned_cols=42 Identities=26% Similarity=0.239 Sum_probs=26.9
Q ss_pred HHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHh
Q 015777 225 HIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEE 275 (400)
Q Consensus 225 ~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~ 275 (400)
+.++.+.++++|+++++|.....+... ..+--.+|++..+-.
T Consensus 168 i~~I~~la~~~gi~livD~t~a~~~~~---------~pl~~GaD~vv~S~t 209 (433)
T PRK08134 168 IPTVAAIAHEAGVPLLVDSTFTTPYLL---------RPFEHGADLVYHSAT 209 (433)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccC---------CchhcCCCEEEeccc
Confidence 467788899999999999764322111 111125888887733
No 110
>PHA00438 hypothetical protein
Probab=33.59 E-value=33 Score=25.79 Aligned_cols=17 Identities=41% Similarity=0.726 Sum_probs=15.3
Q ss_pred CCchHHHHHHHHHHHHc
Q 015777 334 TGAGDAFVAGILSQLST 350 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~ 350 (400)
-|..++|++||++|+..
T Consensus 47 ~G~SE~~IaGfl~Gl~y 63 (81)
T PHA00438 47 AGYSEAFIAGFLAGLQY 63 (81)
T ss_pred cCCcHHHHHHHHHHHHH
Confidence 79999999999999864
No 111
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=32.69 E-value=3.2e+02 Score=24.82 Aligned_cols=112 Identities=17% Similarity=0.046 Sum_probs=57.3
Q ss_pred ecCCChHHHHHHHHHHcCCCceeeecccccccccceeeec--cCCC-cCCCChHHHHHHHHHHHCCCCCCCceecCCCCc
Q 015777 90 KAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVII--LPCP-KVGADEFGYMLADILKENNVNGAGMRFDPGART 166 (400)
Q Consensus 90 ~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~--~~~~-~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t 166 (400)
.-.||.|.++|..|++.|.....+- +++.++..++.. +... -+|. .-.+.+.+.|++.+-+++ +.
T Consensus 27 vG~GglGs~va~~La~~Gvg~i~lv---D~D~ve~sNL~Rq~l~~~~diG~-~Ka~~~~~~l~~~np~~~---i~----- 94 (228)
T cd00757 27 VGAGGLGSPAAEYLAAAGVGKLGLV---DDDVVELSNLQRQILHTEADVGQ-PKAEAAAERLRAINPDVE---IE----- 94 (228)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEE---cCCEEcCcccccccccChhhCCC-hHHHHHHHHHHHhCCCCE---EE-----
Confidence 3579999999999999997433222 234443333333 1111 2444 233455555655432211 10
Q ss_pred eEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEE
Q 015777 167 ALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241 (400)
Q Consensus 167 ~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~ 241 (400)
.++ . .++.+.+ .+.++++|+++.+.- . .+....+.+.+++++++++.
T Consensus 95 -----~~~-----~-----------~i~~~~~-~~~~~~~DvVi~~~d----~--~~~r~~l~~~~~~~~ip~i~ 141 (228)
T cd00757 95 -----AYN-----E-----------RLDAENA-EELIAGYDLVLDCTD----N--FATRYLINDACVKLGKPLVS 141 (228)
T ss_pred -----Eec-----c-----------eeCHHHH-HHHHhCCCEEEEcCC----C--HHHHHHHHHHHHHcCCCEEE
Confidence 000 0 0111122 255678898865421 1 23445567778888887764
No 112
>PRK05967 cystathionine beta-lyase; Provisional
Probab=31.99 E-value=3.5e+02 Score=27.12 Aligned_cols=41 Identities=20% Similarity=0.146 Sum_probs=27.6
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLR 246 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 246 (400)
+.++|++....- .......+.++.+.|+++|+.+++|-.+.
T Consensus 149 ~TklV~lesPsN-P~l~v~dl~~I~~la~~~g~~vvVD~t~a 189 (395)
T PRK05967 149 NTKVVHTEAPGS-NTFEMQDIPAIAEAAHRHGAIVMMDNTWA 189 (395)
T ss_pred CceEEEEECCCC-CCCcHHHHHHHHHHHHHhCCEEEEECCcc
Confidence 466777664321 11234457788899999999999997643
No 113
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=31.88 E-value=3e+02 Score=27.13 Aligned_cols=81 Identities=15% Similarity=0.115 Sum_probs=51.8
Q ss_pred hhcCCccEEEEccc--cc---cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCH
Q 015777 201 SLITKAKIFHYGSI--SL---ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISE 274 (400)
Q Consensus 201 ~~i~~~~~v~~~~~--~~---~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~ 274 (400)
.+-..+|.|++|.- .. ..+.+.+.+.+.+++++++|+++.+-.|....- ...+.+.+.+..+.+ .+|-|++++
T Consensus 22 ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~-~~~~~~~~~l~~l~e~GvDaviv~D 100 (347)
T COG0826 22 AIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYVAVNTLLHN-DELETLERYLDRLVELGVDAVIVAD 100 (347)
T ss_pred HHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEEEecccccc-chhhHHHHHHHHHHHcCCCEEEEcC
Confidence 34456899998743 11 123456678899999999999888776643321 122333455555544 689999888
Q ss_pred hHHhcccC
Q 015777 275 EEISFLTQ 282 (400)
Q Consensus 275 ~E~~~l~~ 282 (400)
--+-.+..
T Consensus 101 pg~i~l~~ 108 (347)
T COG0826 101 PGLIMLAR 108 (347)
T ss_pred HHHHHHHH
Confidence 77666654
No 114
>PF13986 DUF4224: Domain of unknown function (DUF4224)
Probab=31.21 E-value=57 Score=22.07 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=24.3
Q ss_pred EcCHhHHhcccCCCCCcHHHHHHHHHhCCCcEEE
Q 015777 271 KISEEEISFLTQGEDPYDDAVVYKLFHANLKLLL 304 (400)
Q Consensus 271 ~~N~~E~~~l~~~~~~~~~~~~~~l~~~g~~~vv 304 (400)
+++.+|+..|+|..-. ...++.|...|+..++
T Consensus 2 fLT~~El~elTG~k~~--~~Q~~~L~~~Gi~~~~ 33 (47)
T PF13986_consen 2 FLTDEELQELTGYKRP--SKQIRWLRRNGIPFVV 33 (47)
T ss_pred CCCHHHHHHHHCCCCH--HHHHHHHHHCCCeeEE
Confidence 5689999999998764 3456788888877544
No 115
>PRK08223 hypothetical protein; Validated
Probab=31.03 E-value=4.1e+02 Score=25.50 Aligned_cols=116 Identities=15% Similarity=0.096 Sum_probs=60.9
Q ss_pred eecCCChHHHHHHHHHHcCCCceeeecccccccccceeeecc---CCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCC
Q 015777 89 KKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL---PCPKVGADEFGYMLADILKENNVNGAGMRFDPGAR 165 (400)
Q Consensus 89 ~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~---~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~ 165 (400)
..-.||-|..++..|++.|.....+- ++|-++..++.+- ...-+|. .--+...+.+++.+=+++ +
T Consensus 32 IvG~GGLGs~va~~LA~aGVG~i~lv---D~D~Ve~SNLnRQ~l~~~~diG~-~Kve~a~~~l~~iNP~v~---V----- 99 (287)
T PRK08223 32 IAGLGGVGGIHLLTLARLGIGKFTIA---DFDVFELRNFNRQAGAMMSTLGR-PKAEVLAEMVRDINPELE---I----- 99 (287)
T ss_pred EECCCHHHHHHHHHHHHhCCCeEEEE---eCCCcchhccccccCcChhHCCC-cHHHHHHHHHHHHCCCCE---E-----
Confidence 34589999999999999998543332 3455555555441 1112444 223334444544331111 0
Q ss_pred ceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEe
Q 015777 166 TALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYD 242 (400)
Q Consensus 166 t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D 242 (400)
. .+. ..++++.+ .++++++|+|+ +.. +....++...+.+.|++++++++.-
T Consensus 100 -----~----------~~~------~~l~~~n~-~~ll~~~DlVv-D~~---D~~~~~~r~~ln~~c~~~~iP~V~~ 150 (287)
T PRK08223 100 -----R----------AFP------EGIGKENA-DAFLDGVDVYV-DGL---DFFEFDARRLVFAACQQRGIPALTA 150 (287)
T ss_pred -----E----------EEe------cccCccCH-HHHHhCCCEEE-ECC---CCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 0 000 01222222 25677899875 322 2211244556677889999988764
No 116
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=30.36 E-value=2.5e+02 Score=27.94 Aligned_cols=21 Identities=33% Similarity=0.327 Sum_probs=17.0
Q ss_pred HHHHHHHHhhCCCeEEEeCCC
Q 015777 225 HIAAAKAAKDAGVVLSYDPNL 245 (400)
Q Consensus 225 ~~~~~~~a~~~g~~v~~D~~~ 245 (400)
+.++.+.|+++|+++++|-..
T Consensus 165 l~~I~~la~~~gi~livD~t~ 185 (390)
T PRK08133 165 IAALAEIAHAAGALLVVDNCF 185 (390)
T ss_pred HHHHHHHHHHcCCEEEEECCC
Confidence 457778889999999999754
No 117
>PRK09028 cystathionine beta-lyase; Provisional
Probab=30.11 E-value=3.2e+02 Score=27.37 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=28.6
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL 247 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~ 247 (400)
++.+++++....-. ......+.++.+.|+++|+.+++|-.+..
T Consensus 145 ~~TklV~lespsNP-tg~v~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 145 PNTKVLFLESPGSI-TMEVQDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred cCceEEEEECCCCC-CCcHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 35667776653321 12245567888999999999999976543
No 118
>PRK05973 replicative DNA helicase; Provisional
Probab=29.91 E-value=3.5e+02 Score=25.11 Aligned_cols=104 Identities=14% Similarity=0.152 Sum_probs=58.2
Q ss_pred HHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcC
Q 015777 96 PANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRS 175 (400)
Q Consensus 96 ~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~ 175 (400)
+.+.+...++-|.++.+++. + +..+.+.+.+...|++.+... .. +.+...
T Consensus 81 alqfa~~~a~~Ge~vlyfSl---------------------E-es~~~i~~R~~s~g~d~~~~~-----~~---~~~d~~ 130 (237)
T PRK05973 81 GLELAVEAMKSGRTGVFFTL---------------------E-YTEQDVRDRLRALGADRAQFA-----DL---FEFDTS 130 (237)
T ss_pred HHHHHHHHHhcCCeEEEEEE---------------------e-CCHHHHHHHHHHcCCChHHhc-----cc---eEeecC
Confidence 45667767677889999987 2 345778888888888754321 00 111000
Q ss_pred CCCeeEEEecCCCccccCCccccchhhc--CCccEEEEccccccCc-----hhHHHHHHHHHHHhhCCCeEEEeCC
Q 015777 176 DGEREFMFYRNPSADMLLQEAELDLSLI--TKAKIFHYGSISLITE-----PCKSAHIAAAKAAKDAGVVLSYDPN 244 (400)
Q Consensus 176 ~g~r~~~~~~~~~~~~~l~~~~l~~~~i--~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~a~~~g~~v~~D~~ 244 (400)
+ . +..+.+-..+. .+.++++++++..... .....+..+...+++.|+++++=.+
T Consensus 131 d----------~-----~~~~~ii~~l~~~~~~~lVVIDsLq~l~~~~~~~el~~~~~~Lk~~Ak~~gitvIl~sQ 191 (237)
T PRK05973 131 D----------A-----ICADYIIARLASAPRGTLVVIDYLQLLDQRREKPDLSVQVRALKSFARERGLIIVFISQ 191 (237)
T ss_pred C----------C-----CCHHHHHHHHHHhhCCCEEEEEcHHHHhhcccchhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 0 0 11111111111 2467888888764321 1123344567788999999888654
No 119
>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional
Probab=29.69 E-value=2.3e+02 Score=27.64 Aligned_cols=85 Identities=13% Similarity=0.118 Sum_probs=50.8
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSI 214 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~ 214 (400)
.| ..|+.+++.|++.+.....++.-... ....| +.+.+ ++ ..+.-+++....+++.|++.+.+
T Consensus 11 Tg--~VG~~~l~~Leer~fpv~~l~l~~s~--------~~s~g-k~i~f-~g----~~~~V~~l~~~~f~~vDia~fag- 73 (322)
T PRK06901 11 EF--ELSEKLLEALEQSDLEIEQISIVEIE--------PFGEE-QGIRF-NN----KAVEQIAPEEVEWADFNYVFFAG- 73 (322)
T ss_pred Cc--HHHHHHHHHHHhcCCchhheeecccc--------cccCC-CEEEE-CC----EEEEEEECCccCcccCCEEEEcC-
Confidence 55 58999999999998877655443221 01123 22222 11 12444555556678899887632
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCC
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPN 244 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 244 (400)
.+...+....+.+.|+.| +|-+
T Consensus 74 -------~~~s~~~ap~a~~aG~~V-IDnS 95 (322)
T PRK06901 74 -------KMAQAEHLAQAAEAGCIV-IDLY 95 (322)
T ss_pred -------HHHHHHHHHHHHHCCCEE-EECC
Confidence 245666777788888755 4654
No 120
>PF10911 DUF2717: Protein of unknown function (DUF2717); InterPro: IPR020121 The proteins in this entry are uncharacterised.
Probab=29.23 E-value=43 Score=25.15 Aligned_cols=18 Identities=22% Similarity=0.516 Sum_probs=15.8
Q ss_pred CCCchHHHHHHHHHHHHc
Q 015777 333 ATGAGDAFVAGILSQLST 350 (400)
Q Consensus 333 ttGAGDaF~Agfl~~l~~ 350 (400)
..|+.|+|++||+.|+..
T Consensus 46 ~~G~SE~~I~Gfl~Gl~~ 63 (77)
T PF10911_consen 46 KQGWSESYILGFLAGLQY 63 (77)
T ss_pred HccccHHHHHHHHHHHHH
Confidence 469999999999999865
No 121
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=28.63 E-value=4.5e+02 Score=25.81 Aligned_cols=88 Identities=19% Similarity=0.264 Sum_probs=45.6
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSI 214 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~ 214 (400)
-| ..|+.+.+.|++.....+-+...-. ...-|++...+. +.......+..+...+++.|++.++.-
T Consensus 10 TG--~VG~~~~~~L~e~~f~~~~~~~~AS---------~rSaG~~~~~f~---~~~~~v~~~~~~~~~~~~~Divf~~ag 75 (334)
T COG0136 10 TG--AVGQVLLELLEERHFPFEELVLLAS---------ARSAGKKYIEFG---GKSIGVPEDAADEFVFSDVDIVFFAAG 75 (334)
T ss_pred cc--hHHHHHHHHHHhcCCCcceEEEEec---------ccccCCcccccc---CccccCccccccccccccCCEEEEeCc
Confidence 66 4899999999987555442222211 122344422221 111111111123345568888876431
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCC
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPN 244 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 244 (400)
.+...++...+.+.|+ +++|-.
T Consensus 76 -------~~~s~~~~p~~~~~G~-~VIdns 97 (334)
T COG0136 76 -------GSVSKEVEPKAAEAGC-VVIDNS 97 (334)
T ss_pred -------hHHHHHHHHHHHHcCC-EEEeCC
Confidence 2344677778888885 555654
No 122
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=28.35 E-value=1.6e+02 Score=25.09 Aligned_cols=49 Identities=16% Similarity=0.090 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHH
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEI 277 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~ 277 (400)
...+.+.++++.+++.|..+.++.++.. .+...++++..|+++....+.
T Consensus 72 l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~---------~~~~~~il~~iD~l~~g~y~~ 120 (147)
T TIGR02826 72 WNREALLSLLKIFKEKGLKTCLYTGLEP---------KDIPLELVQHLDYLKTGRWIH 120 (147)
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECCCCC---------HHHHHHHHHhCCEEEEChHHH
Confidence 3456778899999999999999987422 123456778999999887543
No 123
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=27.90 E-value=4.1e+02 Score=24.57 Aligned_cols=113 Identities=19% Similarity=0.085 Sum_probs=59.6
Q ss_pred ecCCChHHHHHHHHHHcCCCceeeecccccccccceeeec--cCC-CcCCCChHHHHHHHHHHHCCCCCCCceecCCCCc
Q 015777 90 KAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVII--LPC-PKVGADEFGYMLADILKENNVNGAGMRFDPGART 166 (400)
Q Consensus 90 ~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~--~~~-~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t 166 (400)
.-.||.|.+++..|++.|..-..+- ++|.++..++.+ +.. ..+|. .-.+...+.|++.+-++. +.
T Consensus 30 vG~GglGs~va~~La~~Gvg~i~lv---D~D~ve~sNL~RQ~l~~~~diG~-~Ka~~a~~~l~~inp~v~---i~----- 97 (240)
T TIGR02355 30 VGLGGLGCAASQYLAAAGVGNLTLL---DFDTVSLSNLQRQVLHSDANIGQ-PKVESAKDALTQINPHIA---IN----- 97 (240)
T ss_pred ECcCHHHHHHHHHHHHcCCCEEEEE---eCCcccccCcccceeeeHhhCCC-cHHHHHHHHHHHHCCCcE---EE-----
Confidence 3478999999999999997533321 344444444333 111 12444 233444555554432211 10
Q ss_pred eEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEe
Q 015777 167 ALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYD 242 (400)
Q Consensus 167 ~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D 242 (400)
. +. ..++.+.+ .++++++|+++.+.- . .++...+-+.+.+.++|++.-
T Consensus 98 -----~----------~~------~~i~~~~~-~~~~~~~DlVvd~~D----~--~~~r~~ln~~~~~~~ip~v~~ 145 (240)
T TIGR02355 98 -----P----------IN------AKLDDAEL-AALIAEHDIVVDCTD----N--VEVRNQLNRQCFAAKVPLVSG 145 (240)
T ss_pred -----E----------Ee------ccCCHHHH-HHHhhcCCEEEEcCC----C--HHHHHHHHHHHHHcCCCEEEE
Confidence 0 00 01222222 256778998865431 1 334455677888999988763
No 124
>PRK05968 hypothetical protein; Provisional
Probab=27.84 E-value=3.6e+02 Score=26.75 Aligned_cols=41 Identities=27% Similarity=0.075 Sum_probs=26.6
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCC
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNL 245 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 245 (400)
.+.+++++.... ........+.++.+.++++|+++++|-..
T Consensus 146 ~~tklV~ie~pt-~~~~~~~dl~~i~~la~~~gi~vivD~a~ 186 (389)
T PRK05968 146 PGAKLLYLESPT-SWVFELQDVAALAALAKRHGVVTMIDNSW 186 (389)
T ss_pred ccCCEEEEECCC-CCCCcHHHHHHHHHHHHHcCCEEEEECCC
Confidence 455666655322 11222345677888899999999999754
No 125
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=27.18 E-value=70 Score=30.64 Aligned_cols=39 Identities=15% Similarity=0.094 Sum_probs=25.1
Q ss_pred ccEEEEccccc---cCchhHHHHHHHHHHHhhCCCeEEEeCC
Q 015777 206 AKIFHYGSISL---ITEPCKSAHIAAAKAAKDAGVVLSYDPN 244 (400)
Q Consensus 206 ~~~v~~~~~~~---~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 244 (400)
..+|.+..-.. ....+.+.+.++.+.|+++|+++.+|-.
T Consensus 125 ~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGA 166 (290)
T PF01212_consen 125 PAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGA 166 (290)
T ss_dssp EEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEET
T ss_pred ccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehh
Confidence 44565543332 2334567888999999999999999963
No 126
>PLN02572 UDP-sulfoquinovose synthase
Probab=26.95 E-value=1.4e+02 Score=30.41 Aligned_cols=25 Identities=16% Similarity=0.186 Sum_probs=21.0
Q ss_pred cCCChHHHHHHHHHHcCCCceeeec
Q 015777 91 APGGAPANVAVGIARLGGSSAFIGK 115 (400)
Q Consensus 91 ~~GG~~~N~A~~larLG~~~~~i~~ 115 (400)
..|+-|.+++..|...|.++..+..
T Consensus 55 atGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 55 GDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEEec
Confidence 3577799999999999999888764
No 127
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=26.88 E-value=5e+02 Score=23.98 Aligned_cols=111 Identities=16% Similarity=0.022 Sum_probs=58.9
Q ss_pred cCCChHHHHHHHHHHcCCCceeeecccccccccceeeecc--C-CCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCce
Q 015777 91 APGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL--P-CPKVGADEFGYMLADILKENNVNGAGMRFDPGARTA 167 (400)
Q Consensus 91 ~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~--~-~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~ 167 (400)
..||-|..++.+|++.|..-..+- ++|.++..++.+- . -..+|. .-.+.+.+.|++.+=+++ +
T Consensus 39 G~GglGs~va~~La~~Gvg~i~lv---D~D~ve~sNL~Rq~l~~~~dvG~-~Ka~~a~~~l~~lnp~v~---i------- 104 (245)
T PRK05690 39 GLGGLGCAASQYLAAAGVGTLTLV---DFDTVSLSNLQRQVLHDDATIGQ-PKVESARAALARINPHIA---I------- 104 (245)
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEE---cCCEECcchhhhhhcCChhhCCC-hHHHHHHHHHHHHCCCCE---E-------
Confidence 478999999999999997432221 3455555554431 1 112444 234444555555432111 1
Q ss_pred EEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEE
Q 015777 168 LAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241 (400)
Q Consensus 168 ~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~ 241 (400)
..++ ..++.+.+ .++++++|+++.+.- +.+....+-+.++++++|++.
T Consensus 105 ---~~~~----------------~~i~~~~~-~~~~~~~DiVi~~~D------~~~~r~~ln~~~~~~~ip~v~ 152 (245)
T PRK05690 105 ---ETIN----------------ARLDDDEL-AALIAGHDLVLDCTD------NVATRNQLNRACFAAKKPLVS 152 (245)
T ss_pred ---EEEe----------------ccCCHHHH-HHHHhcCCEEEecCC------CHHHHHHHHHHHHHhCCEEEE
Confidence 0000 01222222 256778998865431 123445566778888998775
No 128
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.28 E-value=1.2e+02 Score=23.57 Aligned_cols=39 Identities=28% Similarity=0.221 Sum_probs=28.6
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeC
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDP 243 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~ 243 (400)
..++++|+|++- ..-.....+..+-+.|++.++|+++--
T Consensus 44 ~~i~~aD~VIv~----t~~vsH~~~~~vk~~akk~~ip~~~~~ 82 (97)
T PF10087_consen 44 SKIKKADLVIVF----TDYVSHNAMWKVKKAAKKYGIPIIYSR 82 (97)
T ss_pred HhcCCCCEEEEE----eCCcChHHHHHHHHHHHHcCCcEEEEC
Confidence 567789987531 122346678888899999999999875
No 129
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=26.00 E-value=2.5e+02 Score=29.77 Aligned_cols=24 Identities=13% Similarity=0.048 Sum_probs=20.4
Q ss_pred CCChHHHHHHHHHHcCCCceeeec
Q 015777 92 PGGAPANVAVGIARLGGSSAFIGK 115 (400)
Q Consensus 92 ~GG~~~N~A~~larLG~~~~~i~~ 115 (400)
.||.|..++..|.+.|.++.++..
T Consensus 89 TGgIG~aLAr~LLk~G~~Vval~R 112 (576)
T PLN03209 89 TGKVGSRTVRELLKLGFRVRAGVR 112 (576)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeC
Confidence 577899999999999998887665
No 130
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=25.87 E-value=3.9e+02 Score=26.56 Aligned_cols=41 Identities=17% Similarity=0.128 Sum_probs=24.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLR 246 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 246 (400)
+.+++++......... ...+.++.+.++++|+++++|-.+.
T Consensus 144 ~tklV~le~p~Np~G~-v~dl~~I~~la~~~gi~livD~a~a 184 (391)
T TIGR01328 144 NTKIVYFETPANPTMK-LIDMERVCRDAHSQGVKVIVDNTFA 184 (391)
T ss_pred CCeEEEEECCCCCCCc-ccCHHHHHHHHHHcCCEEEEECCCc
Confidence 4566665433211111 1124567778899999999997643
No 131
>TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase. Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases.
Probab=25.76 E-value=42 Score=34.25 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=20.0
Q ss_pred ecCCChHHHHHHHHHHcCCCce
Q 015777 90 KAPGGAPANVAVGIARLGGSSA 111 (400)
Q Consensus 90 ~~~GG~~~N~A~~larLG~~~~ 111 (400)
.+.||.+..+|..++++|.++.
T Consensus 86 ~rmGGqAgimAn~la~lg~~~v 107 (446)
T TIGR02045 86 ERMGGQAGIISNLLGRLGLKKV 107 (446)
T ss_pred eeeCCHHHHHHHHHHhcCCceE
Confidence 5899999999999999999854
No 132
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=25.61 E-value=4.8e+02 Score=24.72 Aligned_cols=80 Identities=13% Similarity=0.265 Sum_probs=44.1
Q ss_pred CCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc------cCchhHHHHHHHHH-HHhhC
Q 015777 163 GARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL------ITEPCKSAHIAAAK-AAKDA 235 (400)
Q Consensus 163 ~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~------~~~~~~~~~~~~~~-~a~~~ 235 (400)
+.+.|..+.+.-.+|+.++++..+ ..-....+.+++-+=.+.++++++|-+. ......+...+-++ .+.+.
T Consensus 161 GskLGyVl~v~V~dg~~~i~faSD--vqGp~~~~~l~~i~e~~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~ 238 (304)
T COG2248 161 GSKLGYVLMVAVTDGKSSIVFASD--VQGPINDEALEFILEKRPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEET 238 (304)
T ss_pred ccccceEEEEEEecCCeEEEEccc--ccCCCccHHHHHHHhcCCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhC
Confidence 355666666655678888877532 1112344444433334678888877443 22223333333333 34445
Q ss_pred CCeEEEeCC
Q 015777 236 GVVLSYDPN 244 (400)
Q Consensus 236 g~~v~~D~~ 244 (400)
+..+++|-+
T Consensus 239 ~~~lViDHH 247 (304)
T COG2248 239 NATLVIDHH 247 (304)
T ss_pred cceEEEeeh
Confidence 588999975
No 133
>COG0206 FtsZ Cell division GTPase [Cell division and chromosome partitioning]
Probab=25.59 E-value=4.6e+02 Score=25.82 Aligned_cols=79 Identities=20% Similarity=0.195 Sum_probs=41.7
Q ss_pred hhcCCccEE-EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCC--CChHHHHHhHHhhhccCc--EEEcCHh
Q 015777 201 SLITKAKIF-HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLW--PSADKAREGILSIWETAD--IIKISEE 275 (400)
Q Consensus 201 ~~i~~~~~v-~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~--~~~~~~~~~~~~ll~~~d--vl~~N~~ 275 (400)
+.++.+|.+ +..++.-... .....-+.+.+++.|++++-=...+.... .........++++-+.+| ++++|+.
T Consensus 91 ~~l~g~dmvfitaG~GGGTG--tGaaPVvakiake~g~ltvavvt~Pf~~EG~~r~~~A~~gi~~L~~~~DtlIvi~Ndk 168 (338)
T COG0206 91 EALKGADMVFVTAGMGGGTG--TGAAPVVAEIAKELGALTVAVVTLPFSFEGSPRMENAEEGIEELREVVDTLIVIPNDK 168 (338)
T ss_pred HHhccCCeEEEEeeecCCcc--ccccHHHHHHHHhcCCcEEEEEEecchhcCchHHHHHHHHHHHHHHhCCcEEEEecHH
Confidence 678888944 4444332221 12333456677888875443222111111 123455567777777776 5557777
Q ss_pred HHhccc
Q 015777 276 EISFLT 281 (400)
Q Consensus 276 E~~~l~ 281 (400)
-++..-
T Consensus 169 ll~~~~ 174 (338)
T COG0206 169 LLKGKD 174 (338)
T ss_pred HHhccC
Confidence 665544
No 134
>cd00562 NifX_NifB This CD represents a family of iron-molybdenum cluster-binding proteins that includes NifB, NifX, and NifY, all of which are involved in the synthesis of an iron-molybdenum cofactor (FeMo-co) that binds the active site of the dinitrogenase enzyme. This domain is a predicted small-molecule-binding domain (SMBD) with an alpha/beta fold that is present either as a stand-alone domain (e.g. NifX and NifY) or fused to another conserved domain (e.g. NifB) however, its function is still undetermined.The SCOP database suggests that this domain is most similar to structures within the ribonuclease H superfamily. This conserved domain is represented in two of the three major divisions of life (bacteria and archaea).
Probab=25.50 E-value=1.1e+02 Score=23.56 Aligned_cols=39 Identities=23% Similarity=0.331 Sum_probs=32.7
Q ss_pred CChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCC
Q 015777 93 GGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNG 155 (400)
Q Consensus 93 GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~ 155 (400)
+|.+...+..+...|+++.+.+. +|... .+.|++.||..
T Consensus 47 ~~~~~~~~~~l~~~~v~~vi~~~-------------------iG~~a-----~~~l~~~gI~v 85 (102)
T cd00562 47 GGEGKLAARLLALEGCDAVLVGG-------------------IGGPA-----AAKLEAAGIKP 85 (102)
T ss_pred CccchHHHHHHHHCCCcEEEEcc-------------------cCccH-----HHHHHHcCCEE
Confidence 46778899999999999999999 88753 77888899874
No 135
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=25.26 E-value=2.6e+02 Score=27.47 Aligned_cols=40 Identities=23% Similarity=0.136 Sum_probs=24.2
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNL 245 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 245 (400)
+.+++++.+..-.... ..-+.++.+.++++|+++++|-..
T Consensus 125 ~~~~v~~e~~~np~g~-~~dl~~i~~la~~~g~~livD~t~ 164 (369)
T cd00614 125 ETKLVYVESPTNPTLK-VVDIEAIAELAHEHGALLVVDNTF 164 (369)
T ss_pred CCeEEEEECCCCCCCe-ecCHHHHHHHHHHcCCEEEEECCC
Confidence 4566665543211111 112457788889999999999753
No 136
>PRK07050 cystathionine beta-lyase; Provisional
Probab=25.21 E-value=5.9e+02 Score=25.35 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=26.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLR 246 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~ 246 (400)
+.++|++....- .......+.++.+.|+++|+.+++|-.+.
T Consensus 150 ~tklV~le~p~N-p~~~~~di~~I~~ia~~~gi~livD~a~a 190 (394)
T PRK07050 150 NTRLIWLEAPGS-VTMEVPDVPAITAAARARGVVTAIDNTYS 190 (394)
T ss_pred CCeEEEEECCCC-CCccHhhHHHHHHHHHHcCCEEEEECCcc
Confidence 456666543221 11234456788888999999999997643
No 137
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=25.13 E-value=6e+02 Score=25.40 Aligned_cols=43 Identities=16% Similarity=0.152 Sum_probs=25.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP 248 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~ 248 (400)
+.++|++......... ...+.++.+.|+++|+.+++|-.+...
T Consensus 155 ~tklV~~esp~Nptg~-v~dl~~I~~la~~~g~~vivD~a~a~~ 197 (403)
T PRK07810 155 PTQAVFFETPSNPMQS-LVDIAAVSELAHAAGAKVVLDNVFATP 197 (403)
T ss_pred CceEEEEECCCCCCCe-ecCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 4566665433211111 112456777889999999999865433
No 138
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=24.50 E-value=2.2e+02 Score=22.78 Aligned_cols=40 Identities=10% Similarity=-0.002 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccc
Q 015777 288 DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK 327 (400)
Q Consensus 288 ~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~ 327 (400)
..++++.+.++|++.+.+|....+-+.-..+....++..+
T Consensus 63 ~~~~~~~a~~~g~~vi~iT~~~~s~la~~ad~~l~~~~~~ 102 (128)
T cd05014 63 LLNLLPHLKRRGAPIIAITGNPNSTLAKLSDVVLDLPVEE 102 (128)
T ss_pred HHHHHHHHHHCCCeEEEEeCCCCCchhhhCCEEEECCCCc
Confidence 3466788888999999999988777665555555555433
No 139
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=24.43 E-value=5.5e+02 Score=26.10 Aligned_cols=21 Identities=29% Similarity=0.202 Sum_probs=17.2
Q ss_pred HHHHHHHHhhCCCeEEEeCCC
Q 015777 225 HIAAAKAAKDAGVVLSYDPNL 245 (400)
Q Consensus 225 ~~~~~~~a~~~g~~v~~D~~~ 245 (400)
+.++.+.|+++|+++++|...
T Consensus 174 i~~I~~la~~~gi~livD~t~ 194 (437)
T PRK05613 174 IPAVAEVAHRNQVPLIVDNTI 194 (437)
T ss_pred HHHHHHHHHHcCCeEEEECCC
Confidence 456777889999999999853
No 140
>PRK15447 putative protease; Provisional
Probab=24.21 E-value=6.3e+02 Score=24.15 Aligned_cols=74 Identities=11% Similarity=0.033 Sum_probs=43.6
Q ss_pred CCccEEEEcccc--ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCc-EEEcCHhHHhc
Q 015777 204 TKAKIFHYGSIS--LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TAD-IIKISEEEISF 279 (400)
Q Consensus 204 ~~~~~v~~~~~~--~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~d-vl~~N~~E~~~ 279 (400)
+.+|.|+++.-. ...+...+.+.++++.++++|+.+++-...... ..+ ..+.+.+++. ..| |+.-|..++..
T Consensus 27 ~gaDaVY~g~~~~~~R~~f~~~~l~e~v~~~~~~gkkvyva~p~i~~---~~~-e~~~l~~~l~~~~~~v~v~d~g~l~~ 102 (301)
T PRK15447 27 SPVDIVYLGETVCSKRRELKVGDWLELAERLAAAGKEVVLSTLALVE---APS-ELKELRRLVENGEFLVEANDLGAVRL 102 (301)
T ss_pred CCCCEEEECCccCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccccc---CHH-HHHHHHHHHhcCCCEEEEeCHHHHHH
Confidence 379999987322 122345678889999999999999986532111 111 1233334444 345 44456666655
Q ss_pred cc
Q 015777 280 LT 281 (400)
Q Consensus 280 l~ 281 (400)
+-
T Consensus 103 ~~ 104 (301)
T PRK15447 103 LA 104 (301)
T ss_pred HH
Confidence 54
No 141
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=24.14 E-value=2e+02 Score=23.23 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=28.9
Q ss_pred cchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCC
Q 015777 198 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP 248 (400)
Q Consensus 198 l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~ 248 (400)
.+.+.+.++|++.++. +.....++.+.+.+.|+ .++|.+...+
T Consensus 59 ~~~~~~~~~Dvvf~a~-------~~~~~~~~~~~~~~~g~-~ViD~s~~~R 101 (121)
T PF01118_consen 59 ADPEELSDVDVVFLAL-------PHGASKELAPKLLKAGI-KVIDLSGDFR 101 (121)
T ss_dssp TSGHHHTTESEEEE-S-------CHHHHHHHHHHHHHTTS-EEEESSSTTT
T ss_pred cchhHhhcCCEEEecC-------chhHHHHHHHHHhhCCc-EEEeCCHHHh
Confidence 3446678999987653 13456677777788888 7779876544
No 142
>COG2200 Rtn c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms]
Probab=23.89 E-value=5.7e+02 Score=23.70 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC
Q 015777 223 SAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED 285 (400)
Q Consensus 223 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~ 285 (400)
+.....++..++.|+++.+|== ..+-.-...+.++ .+|++|........+.....
T Consensus 136 ~~~~~~l~~L~~~G~~ialDDF------GtG~ssl~~L~~l--~~d~iKID~~fi~~i~~~~~ 190 (256)
T COG2200 136 DTALALLRQLRELGVRIALDDF------GTGYSSLSYLKRL--PPDILKIDRSFVRDLETDAR 190 (256)
T ss_pred HHHHHHHHHHHHCCCeEEEECC------CCCHHHHHHHhhC--CCCeEEECHHHHhhcccCcc
Confidence 3567788999999999999841 1122222333332 79999999999988765543
No 143
>PRK14852 hypothetical protein; Provisional
Probab=23.84 E-value=5.1e+02 Score=29.44 Aligned_cols=38 Identities=21% Similarity=0.155 Sum_probs=27.9
Q ss_pred eecCCChHHHHHHHHHHcCCCceeeecccccccccceeeec
Q 015777 89 KKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVII 129 (400)
Q Consensus 89 ~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~ 129 (400)
....||.|..++..|++.|.....+- ++|.++..++..
T Consensus 337 VvGlGGlGs~ia~~LAraGVG~I~L~---D~D~Ve~SNLNR 374 (989)
T PRK14852 337 IAGLGGVGGIHLMTLARTGIGNFNLA---DFDAYSPVNLNR 374 (989)
T ss_pred EECCcHHHHHHHHHHHHcCCCeEEEE---cCCEeccccccc
Confidence 44689999999999999998533332 467777766655
No 144
>PRK14851 hypothetical protein; Provisional
Probab=23.75 E-value=5.2e+02 Score=28.10 Aligned_cols=38 Identities=24% Similarity=0.193 Sum_probs=26.9
Q ss_pred eecCCChHHHHHHHHHHcCCCceeeecccccccccceeeec
Q 015777 89 KKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVII 129 (400)
Q Consensus 89 ~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~ 129 (400)
..-.||.|.+++.+|++.|..-..+- ++|.++..|+.+
T Consensus 48 IvG~GGlGs~va~~Lar~GVG~l~Lv---D~D~ve~sNLNR 85 (679)
T PRK14851 48 IPGMGGVGGVHLITMVRTGIGRFHIA---DFDQFEPVNVNR 85 (679)
T ss_pred EECcCHHHHHHHHHHHHhCCCeEEEE---cCCEeccccccc
Confidence 34688999999999999998433332 456666666554
No 145
>TIGR01093 aroD 3-dehydroquinate dehydratase, type I. Type II 3-dehydroquinate dehydratase, designated AroQ, is described by TIGR01088.
Probab=23.68 E-value=5.6e+02 Score=23.28 Aligned_cols=95 Identities=19% Similarity=0.132 Sum_probs=55.1
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc-CcEEEc-----CHhHHhc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET-ADIIKI-----SEEEISF 279 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~-~dvl~~-----N~~E~~~ 279 (400)
+|++-+.-. ...+...++++.+++.+.+++.--+....-|. .+.+.+.+.+.... +|++++ +.++...
T Consensus 93 ~d~vDiEl~-----~~~~~~~~l~~~~~~~~~kvI~S~H~f~~tp~-~~~l~~~~~~~~~~gaDivKia~~a~~~~D~~~ 166 (228)
T TIGR01093 93 PDFVDIELF-----LPDDAVKELINIAKKGGTKIIMSYHDFQKTPS-WEEIVERLEKALSYGADIVKIAVMANSKEDVLT 166 (228)
T ss_pred CCEEEEEcc-----CCHHHHHHHHHHHHHCCCEEEEeccCCCCCCC-HHHHHHHHHHHHHhCCCEEEEEeccCCHHHHHH
Confidence 577755421 12345667777778888888887765444443 34455666665554 899986 2233322
Q ss_pred ccCCCCCcHHHHHHHHHh-CCCcEEEEEecCCcEEE
Q 015777 280 LTQGEDPYDDAVVYKLFH-ANLKLLLVTEGPDGCRY 314 (400)
Q Consensus 280 l~~~~~~~~~~~~~~l~~-~g~~~vvvT~G~~G~~~ 314 (400)
|. .....+.+ .....+.+.+|+.|..-
T Consensus 167 ll--------~~~~~~~~~~~~p~i~~~MG~~G~~S 194 (228)
T TIGR01093 167 LL--------EITNKVDEHADVPLITMSMGDRGKIS 194 (228)
T ss_pred HH--------HHHHHHHhcCCCCEEEEeCCCCChhH
Confidence 21 11122221 24678899999998643
No 146
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Probab=23.22 E-value=1.2e+02 Score=32.58 Aligned_cols=26 Identities=35% Similarity=0.497 Sum_probs=22.4
Q ss_pred cCCChHHHHHHHHHHcCCCceeeecc
Q 015777 91 APGGAPANVAVGIARLGGSSAFIGKT 116 (400)
Q Consensus 91 ~~GG~~~N~A~~larLG~~~~~i~~~ 116 (400)
-.|++|..+|+.++..|.+|.++.+.
T Consensus 57 G~G~AGl~AAl~Aae~G~~VilveK~ 82 (635)
T PLN00128 57 GAGGAGLRAAIGLSEHGFNTACITKL 82 (635)
T ss_pred CccHHHHHHHHHHHhcCCcEEEEEcC
Confidence 36778999999999999999998884
No 147
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=23.04 E-value=1.3e+02 Score=30.17 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=41.7
Q ss_pred CccccCCccccchhhcCCccEEEEcccc--ccCchhHHHHHHHHHHHhhCCCeEEEeCC
Q 015777 188 SADMLLQEAELDLSLITKAKIFHYGSIS--LITEPCKSAHIAAAKAAKDAGVVLSYDPN 244 (400)
Q Consensus 188 ~~~~~l~~~~l~~~~i~~~~~v~~~~~~--~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 244 (400)
+.+..++.++++..+-++.+++++..-. .+.--+++.+.++.+.|+++|..|+.|-.
T Consensus 155 s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDev 213 (420)
T KOG0257|consen 155 SSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEV 213 (420)
T ss_pred CccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhH
Confidence 4456677777777777889988875422 12234588899999999999998888854
No 148
>PRK14039 ADP-dependent glucokinase; Provisional
Probab=22.81 E-value=53 Score=33.59 Aligned_cols=26 Identities=23% Similarity=0.258 Sum_probs=22.6
Q ss_pred CceecCCChHHHHHHHHHHcCCCcee
Q 015777 87 AFKKAPGGAPANVAVGIARLGGSSAF 112 (400)
Q Consensus 87 ~~~~~~GG~~~N~A~~larLG~~~~~ 112 (400)
....+.||.+..+|..++++|.++.+
T Consensus 85 ~~~~rmGGnAgimAn~la~lg~~~Vi 110 (453)
T PRK14039 85 NSEIRMGGNAGIMANVLSELGASRVV 110 (453)
T ss_pred CceEEeCChHHHHHHHHHhcCCceEE
Confidence 34689999999999999999998655
No 149
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=22.58 E-value=6.6e+02 Score=23.74 Aligned_cols=26 Identities=27% Similarity=0.277 Sum_probs=20.4
Q ss_pred eecCCChHHHHHHHHHHcCC-Cceeee
Q 015777 89 KKAPGGAPANVAVGIARLGG-SSAFIG 114 (400)
Q Consensus 89 ~~~~GG~~~N~A~~larLG~-~~~~i~ 114 (400)
-.-.||.|..+|.+|+|.|. +.+++-
T Consensus 35 VvG~GGVGs~vae~Lar~GVg~itLiD 61 (268)
T PRK15116 35 VVGIGGVGSWAAEALARTGIGAITLID 61 (268)
T ss_pred EECcCHHHHHHHHHHHHcCCCEEEEEe
Confidence 34689999999999999995 445544
No 150
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=22.54 E-value=3.8e+02 Score=23.26 Aligned_cols=18 Identities=17% Similarity=0.054 Sum_probs=8.9
Q ss_pred HHHHHHHHHhhCCCeEEE
Q 015777 224 AHIAAAKAAKDAGVVLSY 241 (400)
Q Consensus 224 ~~~~~~~~a~~~g~~v~~ 241 (400)
.+.++++.+.+++.++++
T Consensus 34 l~~~ll~~~~~~~~~v~l 51 (171)
T cd06533 34 LMPALLELAAQKGLRVFL 51 (171)
T ss_pred HHHHHHHHHHHcCCeEEE
Confidence 444555555555554444
No 151
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=22.52 E-value=4.5e+02 Score=25.74 Aligned_cols=40 Identities=23% Similarity=0.184 Sum_probs=26.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNL 245 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~ 245 (400)
+.+++++..... .......+.++.+.++++|+.+++|-.+
T Consensus 136 ~tklv~le~P~N-P~~~~~dl~~I~~la~~~g~~lIvD~t~ 175 (366)
T PRK08247 136 NTKAIFIETPTN-PLMQETDIAAIAKIAKKHGLLLIVDNTF 175 (366)
T ss_pred CceEEEEECCCC-CCCcHHHHHHHHHHHHHcCCEEEEECCC
Confidence 456776643221 1122445678888899999999999765
No 152
>TIGR01826 CofD_related conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam model pfam01933.
Probab=22.39 E-value=5.7e+02 Score=24.84 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=36.4
Q ss_pred hhcCCccEEEEccccccCchhHHH-HHHHHHHHhhCCCeEEEeCCCC-CCCCC---ChHHHHHhHHhhhc--cCcEEEcC
Q 015777 201 SLITKAKIFHYGSISLITEPCKSA-HIAAAKAAKDAGVVLSYDPNLR-LPLWP---SADKAREGILSIWE--TADIIKIS 273 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~-~~~~~~~a~~~g~~v~~D~~~~-~~~~~---~~~~~~~~~~~ll~--~~dvl~~N 273 (400)
+.|+++|+|+++.-++...+.+.. ...+.+..++...+.++=+|.. .+-.+ +....-+.+.+.+. ..|++..|
T Consensus 168 ~AI~~ADlIvlgPGSlyTSIiPnLlv~gI~eAI~~s~a~kV~v~N~~tq~gEt~g~~~~dhv~~i~~~~g~~~~D~vlvn 247 (310)
T TIGR01826 168 EAIREADLIILGPGSLYTSIIPNLLVPEIAEALRESKAPKVYVCNLMTQPGETDGFSLEDHVDALHRHLGKPFIDTVLVN 247 (310)
T ss_pred HHHHhCCEEEECCCcCHHHhchhcCchhHHHHHHhCCCCEEEEeCCCCCCCCCCCCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence 678899999987655433322221 1122222333344444433321 11011 22233333333333 47999988
Q ss_pred HhHH
Q 015777 274 EEEI 277 (400)
Q Consensus 274 ~~E~ 277 (400)
..+.
T Consensus 248 ~~~~ 251 (310)
T TIGR01826 248 TEKV 251 (310)
T ss_pred CCCC
Confidence 7655
No 153
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=22.08 E-value=1.7e+02 Score=24.89 Aligned_cols=42 Identities=17% Similarity=0.223 Sum_probs=29.3
Q ss_pred chhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCC
Q 015777 199 DLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPN 244 (400)
Q Consensus 199 ~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 244 (400)
.++++..||++.+.+-++.+. ++.++++.+++....+++=|.
T Consensus 56 ~~~~l~~aD~viiTGsTlvN~----Ti~~iL~~~~~~~~vil~GpS 97 (147)
T PF04016_consen 56 AEEILPWADVVIITGSTLVNG----TIDDILELARNAREVILYGPS 97 (147)
T ss_dssp HHHHGGG-SEEEEECHHCCTT----THHHHHHHTTTSSEEEEESCC
T ss_pred HHHHHccCCEEEEEeeeeecC----CHHHHHHhCccCCeEEEEecC
Confidence 347889999999888766654 677888888855555666553
No 154
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=21.35 E-value=3.2e+02 Score=21.47 Aligned_cols=60 Identities=10% Similarity=0.157 Sum_probs=32.3
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhC---CCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDA---GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK 271 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~---g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~ 271 (400)
+++|++++.+-........+....+ ..+++. +.++++--.. .+...+.+.+..+.+|+++
T Consensus 35 e~AD~iiiNTC~V~~~Ae~k~~~~i-~~l~~~~~~~~~ivv~GC~-------aq~~~~~l~~~~p~vd~v~ 97 (98)
T PF00919_consen 35 EEADVIIINTCTVRESAEQKSRNRI-RKLKKLKKPGAKIVVTGCM-------AQRYGEELKKEFPEVDLVV 97 (98)
T ss_pred ccCCEEEEEcCCCCcHHHHHHHHHH-HHHHHhcCCCCEEEEEeCc-------cccChHHHHhhCCCeEEEe
Confidence 4677777665444444444444333 333333 3666665432 1223455666777888875
No 155
>PF11469 Ribonucleas_3_2: Ribonuclease III; InterPro: IPR021568 This archaeal family of proteins has no known function. ; PDB: 1ZTD_A.
Probab=20.92 E-value=1.5e+02 Score=23.76 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=26.4
Q ss_pred ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHH
Q 015777 330 AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRF 367 (400)
Q Consensus 330 vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~ 367 (400)
-.|-.|-||..-|-+.++|++|.- +.+||++.
T Consensus 52 R~dkh~kGd~aEA~iAyAWLeg~i------t~eEavei 83 (120)
T PF11469_consen 52 RTDKHGKGDIAEALIAYAWLEGKI------TIEEAVEI 83 (120)
T ss_dssp CGGCCGHHHHHHHHHHHHHHTTSS-------HHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHhccc------cHHHHHHH
Confidence 358899999999999999999965 37887764
No 156
>COG1433 Uncharacterized conserved protein [Function unknown]
Probab=20.62 E-value=1.4e+02 Score=24.62 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=36.5
Q ss_pred eecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCC
Q 015777 89 KKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNG 155 (400)
Q Consensus 89 ~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~ 155 (400)
.....|.|.-++..|...|.++.+++. +|... .+.|++.||++
T Consensus 47 ~~~~~g~G~~~a~~l~~~gvdvvi~~~-------------------iG~~a-----~~~l~~~GIkv 89 (121)
T COG1433 47 ASAEKGAGIRIAELLVDEGVDVVIASN-------------------IGPNA-----YNALKAAGIKV 89 (121)
T ss_pred ccccCcchHHHHHHHHHcCCCEEEECc-------------------cCHHH-----HHHHHHcCcEE
Confidence 456788899999999999999999999 88643 67899999984
No 157
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=20.42 E-value=7.5e+02 Score=23.58 Aligned_cols=45 Identities=27% Similarity=0.365 Sum_probs=34.6
Q ss_pred ceecCCChHHHHHHHHHHcCCC-ceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCC
Q 015777 88 FKKAPGGAPANVAVGIARLGGS-SAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNV 153 (400)
Q Consensus 88 ~~~~~GG~~~N~A~~larLG~~-~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV 153 (400)
...-.||++.=++.+|+.+|.+ ..++-. +.+..+.+.+.+.+.+.
T Consensus 130 lilGAGGAarAv~~aL~~~g~~~i~V~NR---------------------t~~ra~~La~~~~~~~~ 175 (283)
T COG0169 130 LILGAGGAARAVAFALAEAGAKRITVVNR---------------------TRERAEELADLFGELGA 175 (283)
T ss_pred EEECCcHHHHHHHHHHHHcCCCEEEEEeC---------------------CHHHHHHHHHHhhhccc
Confidence 4557899999999999999974 555555 34567888888887764
No 158
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=20.17 E-value=1.5e+02 Score=27.46 Aligned_cols=45 Identities=11% Similarity=0.158 Sum_probs=34.7
Q ss_pred HHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCc
Q 015777 99 VAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGM 158 (400)
Q Consensus 99 ~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v 158 (400)
.+..|..+|.++.-++.-|.+| .|.+.+-+ -++.|++.||...+.
T Consensus 67 ~~~~L~~~G~d~vslANNH~~D--------------~G~~gl~~-Tl~~L~~~gi~~~Ga 111 (250)
T PF09587_consen 67 ILDALKDAGFDVVSLANNHIFD--------------YGEEGLLD-TLEALDKAGIPYVGA 111 (250)
T ss_pred HHHHHHHcCCCEEEecCCCCcc--------------ccHHHHHH-HHHHHHHCCCcEeEC
Confidence 4789999999988888767777 77755444 467889999887664
Done!