Query 015777
Match_columns 400
No_of_seqs 258 out of 1707
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 18:29:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015777.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015777hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ljs_A Fructokinase; fructokia 100.0 6E-54 2E-58 419.1 24.7 314 57-397 1-328 (338)
2 3pl2_A Sugar kinase, ribokinas 100.0 4.8E-52 1.6E-56 402.2 31.2 312 57-397 5-317 (319)
3 3iq0_A Putative ribokinase II; 100.0 6.9E-51 2.4E-55 396.2 32.1 310 59-397 2-312 (330)
4 2qcv_A Putative 5-dehydro-2-de 100.0 5.1E-50 1.7E-54 390.1 34.4 313 59-397 10-325 (332)
5 4du5_A PFKB; structural genomi 100.0 1.8E-50 6.1E-55 394.4 29.4 309 57-394 23-334 (336)
6 3hj6_A Fructokinase, FRK; fruc 100.0 3.8E-52 1.3E-56 404.6 15.8 308 58-396 19-326 (327)
7 3ktn_A Carbohydrate kinase, PF 100.0 4.4E-49 1.5E-53 385.7 33.1 310 59-397 1-331 (346)
8 2v78_A Fructokinase; transfera 100.0 2.5E-49 8.6E-54 382.2 29.5 305 61-398 2-311 (313)
9 1v1a_A 2-keto-3-deoxygluconate 100.0 7.9E-49 2.7E-53 378.1 31.8 300 61-397 2-303 (309)
10 1tyy_A Putative sugar kinase; 100.0 1E-49 3.4E-54 389.6 24.0 301 60-397 24-329 (339)
11 2dcn_A Hypothetical fructokina 100.0 1.9E-48 6.7E-53 375.5 29.5 304 61-399 2-310 (311)
12 3h49_A Ribokinase; transferase 100.0 2.8E-48 9.7E-53 377.0 29.4 305 60-398 5-315 (325)
13 4gm6_A PFKB family carbohydrat 100.0 7.2E-48 2.5E-52 377.8 29.3 310 58-397 22-344 (351)
14 3ry7_A Ribokinase; transferase 100.0 2.6E-48 8.7E-53 373.4 25.1 292 59-393 1-303 (304)
15 3ewm_A Uncharacterized sugar k 100.0 1.1E-47 3.9E-52 370.7 28.3 297 60-397 1-300 (313)
16 3go6_A Ribokinase RBSK; phosph 100.0 3.2E-47 1.1E-51 367.4 29.8 286 53-398 12-305 (310)
17 1rkd_A Ribokinase; carbohydrat 100.0 3.5E-47 1.2E-51 366.4 28.2 297 58-397 2-307 (309)
18 4e69_A 2-dehydro-3-deoxyglucon 100.0 7.4E-47 2.5E-51 367.7 30.5 297 48-383 15-317 (328)
19 2rbc_A Sugar kinase, AGR_C_456 100.0 6.6E-47 2.2E-51 370.3 30.3 293 59-397 28-328 (343)
20 3lhx_A Ketodeoxygluconokinase; 100.0 3.2E-47 1.1E-51 368.6 27.2 291 57-383 1-304 (319)
21 3kzh_A Probable sugar kinase; 100.0 5.5E-47 1.9E-51 368.4 27.5 299 58-398 4-310 (328)
22 4e3a_A Sugar kinase protein; s 100.0 1.2E-46 4.1E-51 369.7 29.0 300 60-394 25-349 (352)
23 3ikh_A Carbohydrate kinase; tr 100.0 4.8E-47 1.7E-51 364.2 25.0 281 59-398 1-289 (299)
24 2c4e_A Sugar kinase MJ0406; tr 100.0 8.2E-47 2.8E-51 363.0 25.1 289 61-397 6-299 (302)
25 2fv7_A Ribokinase; structural 100.0 3.2E-46 1.1E-50 363.5 25.0 295 57-393 21-328 (331)
26 2nwh_A AGR_C_3442P, carbohydra 100.0 1.8E-45 6.1E-50 356.1 26.9 297 60-397 3-307 (317)
27 3vas_A Putative adenosine kina 100.0 5.1E-46 1.7E-50 367.6 23.5 296 60-392 24-365 (370)
28 1vm7_A Ribokinase; TM0960, str 100.0 3.3E-45 1.1E-49 353.5 28.6 291 59-398 13-311 (311)
29 2qhp_A Fructokinase; NP_810670 100.0 5.5E-45 1.9E-49 348.9 25.9 287 59-393 2-293 (296)
30 2afb_A 2-keto-3-deoxygluconate 100.0 7.9E-44 2.7E-48 349.2 33.9 309 59-397 11-343 (351)
31 2pkf_A Adenosine kinase; trans 100.0 6.9E-45 2.3E-49 354.6 25.8 292 60-397 10-319 (334)
32 3b1n_A Ribokinase, putative; r 100.0 5.9E-45 2E-49 354.0 25.3 289 61-397 1-305 (326)
33 3otx_A Adenosine kinase, putat 100.0 1.5E-44 5E-49 353.9 24.6 292 59-388 6-342 (347)
34 3ie7_A LIN2199 protein; phosph 100.0 3.2E-43 1.1E-47 340.5 31.4 290 60-398 2-304 (320)
35 2jg1_A Tagatose-6-phosphate ki 100.0 3.6E-43 1.2E-47 341.9 27.5 290 60-398 20-325 (330)
36 3loo_A Anopheles gambiae adeno 100.0 1.6E-44 5.6E-49 356.2 18.0 287 61-383 24-355 (365)
37 3umo_A 6-phosphofructokinase i 100.0 1.7E-42 5.7E-47 333.7 28.3 291 62-399 3-308 (309)
38 3uq6_A Adenosine kinase, putat 100.0 2E-43 6.8E-48 349.3 22.2 298 62-396 28-371 (372)
39 2f02_A Tagatose-6-phosphate ki 100.0 3.1E-42 1.1E-46 334.2 28.4 292 60-398 2-308 (323)
40 4e84_A D-beta-D-heptose 7-phos 100.0 3.6E-43 1.2E-47 345.0 22.0 287 59-392 52-351 (352)
41 2ajr_A Sugar kinase, PFKB fami 100.0 1.2E-42 4.1E-47 338.3 25.3 291 59-398 11-325 (331)
42 3bf5_A Ribokinase related prot 100.0 2.1E-43 7.3E-48 340.1 17.4 277 59-397 19-300 (306)
43 3cqd_A 6-phosphofructokinase i 100.0 4.6E-42 1.6E-46 330.7 26.6 288 62-398 3-307 (309)
44 1bx4_A Protein (adenosine kina 100.0 6.9E-43 2.4E-47 341.6 20.5 291 60-388 6-341 (345)
45 2abs_A Adenosine kinase, AK; r 100.0 2.5E-42 8.6E-47 342.6 23.9 288 59-382 31-375 (383)
46 2hlz_A Ketohexokinase; non-pro 100.0 2.1E-41 7.3E-46 326.9 29.1 276 60-382 17-309 (312)
47 3kd6_A Carbohydrate kinase, PF 100.0 5.1E-42 1.8E-46 331.3 23.4 292 59-397 1-297 (313)
48 2abq_A Fructose 1-phosphate ki 100.0 7.7E-41 2.6E-45 321.8 27.2 285 62-398 2-298 (306)
49 2jg5_A Fructose 1-phosphate ki 100.0 1.9E-40 6.6E-45 318.8 29.0 285 62-398 2-298 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 4.1E-38 1.4E-42 301.9 15.7 278 61-392 12-293 (298)
51 2ddm_A Pyridoxine kinase; pyri 99.9 4.5E-25 1.5E-29 209.5 14.7 216 135-380 30-268 (283)
52 2yxt_A Pyridoxal kinase; beta 99.9 4E-25 1.4E-29 212.9 12.8 211 135-378 19-269 (312)
53 1jxh_A Phosphomethylpyrimidine 99.9 8.7E-22 3E-26 187.5 15.8 160 206-379 95-269 (288)
54 1ub0_A THID, phosphomethylpyri 99.9 6.8E-22 2.3E-26 184.9 13.3 161 205-379 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.9 8.3E-21 2.8E-25 178.9 16.8 163 205-379 74-250 (271)
56 3mbh_A Putative phosphomethylp 99.8 5.8E-19 2E-23 168.2 17.3 164 205-378 77-258 (291)
57 3h74_A Pyridoxal kinase; PSI-I 99.8 9.5E-19 3.3E-23 166.0 16.7 161 205-378 74-248 (282)
58 3pzs_A PM kinase, pyridoxamine 99.8 8.6E-19 3E-23 166.9 15.8 165 203-378 75-259 (289)
59 3zs7_A Pyridoxal kinase; trans 99.7 2.4E-17 8.2E-22 157.6 16.7 163 204-378 75-261 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.6 2.8E-14 9.6E-19 134.4 15.7 163 201-377 54-234 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.6 4.9E-14 1.7E-18 145.3 16.1 159 205-375 91-272 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.2 1.6E-10 5.6E-15 108.1 13.1 146 201-353 52-210 (265)
63 3bgk_A SMU.573, putative uncha 99.0 2.4E-09 8E-14 102.4 13.1 172 201-397 121-304 (311)
64 3dzv_A 4-methyl-5-(beta-hydrox 99.0 1.5E-08 5.2E-13 94.7 17.3 166 191-371 45-229 (273)
65 2r3b_A YJEF-related protein; p 99.0 3.6E-09 1.2E-13 101.1 12.7 170 201-397 107-287 (310)
66 3rpz_A ADP/ATP-dependent NAD(P 98.8 1.4E-07 5E-12 88.5 15.8 171 202-397 95-273 (279)
67 3rss_A Putative uncharacterize 98.6 8.7E-07 3E-11 89.8 17.6 174 201-397 316-495 (502)
68 3drw_A ADP-specific phosphofru 98.6 2.1E-06 7.1E-11 85.6 17.4 78 202-283 233-319 (474)
69 3nl6_A Thiamine biosynthetic b 98.4 1.3E-05 4.4E-10 82.0 18.8 164 191-371 292-495 (540)
70 1ua4_A Glucokinase, ADP-depend 98.3 2.6E-06 8.8E-11 85.0 11.4 163 91-282 109-301 (455)
71 3hpd_A Hydroxyethylthiazole ki 98.2 1.4E-05 4.7E-10 74.2 12.8 154 201-369 52-218 (265)
72 1gc5_A ADP-dependent glucokina 98.0 0.00011 3.8E-09 73.2 15.2 161 91-281 117-313 (467)
73 1l2l_A ADP-dependent glucokina 97.9 7.2E-05 2.5E-09 74.4 11.8 75 201-280 224-302 (457)
74 3k5w_A Carbohydrate kinase; 11 97.4 0.002 6.8E-08 64.7 14.6 166 203-397 290-466 (475)
75 2fcj_A Small toprim domain pro 54.9 22 0.00075 28.2 5.5 80 205-299 26-105 (119)
76 3can_A Pyruvate-formate lyase- 52.0 99 0.0034 25.4 11.0 74 223-304 19-97 (182)
77 2yci_X 5-methyltetrahydrofolat 43.6 1.1E+02 0.0039 27.6 9.3 91 203-311 45-137 (271)
78 1f6y_A 5-methyltetrahydrofolat 32.5 2.7E+02 0.0092 24.8 10.8 90 204-311 37-128 (262)
79 3c8f_A Pyruvate formate-lyase 26.5 2.9E+02 0.0099 23.3 9.8 76 222-303 84-164 (245)
80 3r3s_A Oxidoreductase; structu 25.9 3.4E+02 0.012 24.1 9.6 24 92-115 58-81 (294)
81 3kkj_A Amine oxidase, flavin-c 22.6 68 0.0023 26.9 3.9 21 95-115 13-33 (336)
82 4fyk_A Deoxyribonucleoside 5'- 21.8 3.3E+02 0.011 22.2 7.8 80 221-311 17-106 (152)
83 1v95_A Nuclear receptor coacti 21.5 37 0.0013 27.3 1.7 30 124-156 8-39 (130)
84 1y8q_A Ubiquitin-like 1 activa 21.0 4.9E+02 0.017 24.0 9.8 111 89-241 41-155 (346)
85 3kgw_A Alanine-glyoxylate amin 20.2 1.4E+02 0.0049 27.2 5.8 20 225-244 167-186 (393)
No 1
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=6e-54 Score=419.08 Aligned_cols=314 Identities=37% Similarity=0.596 Sum_probs=270.5
Q ss_pred CCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
|.++++|+|||++++|++...++.|.. ...+...+||++.|+|++|+|||.++.++|. +|
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~~~~~~-~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG 60 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPLVKKGM-PRAFLQCAGGAPANVAVAVARLGGAVQFVGM-------------------LG 60 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCCSSTTS-CCCEEEEEECHHHHHHHHHHHHTCCEEEESE-------------------EE
T ss_pred CCCCCCEEEEChhhhheeccCCCCccc-hhceeecCCChHHHHHHHHHhCCCCEEEEee-------------------cc
Confidence 456689999999999999988776553 6778899999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~ 216 (400)
+|.+|+++++.|+++||+++++.+.++.+|+.+++.++++|+|++.+++.++++..+++++++.+.+++++++|++++.+
T Consensus 61 ~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l 140 (338)
T 3ljs_A 61 SDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSM 140 (338)
T ss_dssp SSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGG
T ss_pred CCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHh
Confidence 99999999999999999999999888889999999999999999988877788888888888877889999999999887
Q ss_pred cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
..+...+.+.++++.++++|+++++||+++..+|.+.+...+.+.++++++|++++|++|++.|++....+.+++++.|+
T Consensus 141 ~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~ 220 (338)
T 3ljs_A 141 TDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLW 220 (338)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCHHHHHHHHT
T ss_pred cCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhHHHHHHHHH
Confidence 77777888999999999999999999999998887666667788889999999999999999999876655445788888
Q ss_pred hCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC--------------CccccchHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD--------------FSLLQKEDQLR 362 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g--------------~~~~~~~~~l~ 362 (400)
+.|++.|+||+|++|++++.+++.+++|+++++++|||||||+|+|||+++|++| ++ ++
T Consensus 221 ~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~-------l~ 293 (338)
T 3ljs_A 221 QGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPES-------IV 293 (338)
T ss_dssp TTTCCEEEEEETTEEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHH-------HH
T ss_pred hcCCCEEEEeeCCCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHH-------HH
Confidence 9999999999999999999999999999999999999999999999999999998 55 99
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 363 DALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 363 ~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+|+++|+++|+++|++.|+.+++|++++|++++++
T Consensus 294 ~al~~A~~~aa~~v~~~Ga~~~~p~~~ev~~~~~~ 328 (338)
T 3ljs_A 294 STLRFAAAVGALAVTRQGAFTAMPMLSEVLSLIQE 328 (338)
T ss_dssp HHHHHHHHHHGGGC----CCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHhh
Confidence 99999999999999999999999999999999875
No 2
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=4.8e-52 Score=402.19 Aligned_cols=312 Identities=27% Similarity=0.421 Sum_probs=281.7
Q ss_pred CCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
|.++++|++||++++|++...++.|..+...+...+||++.|+|++|++||.++.++|. +|
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG 65 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSR-------------------VG 65 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEE-------------------EE
T ss_pred cccCCCEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEE-------------------eC
Confidence 34567899999999999998888888778888999999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCc-cccCCccccchhhcCCccEEEEcccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSA-DMLLQEAELDLSLITKAKIFHYGSIS 215 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~-~~~l~~~~l~~~~i~~~~~v~~~~~~ 215 (400)
+|.+|+++++.|+++||+++++.+.++.+|+.+++.++.+|++.+.+++.+++ +..+++++++.+.+++++++|++++.
T Consensus 66 ~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~ 145 (319)
T 3pl2_A 66 NDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTG 145 (319)
T ss_dssp SSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGG
T ss_pred CCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEeccc
Confidence 99999999999999999999998888889999999888889998888876655 67788888887888999999999887
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
+..++..+....+++.+++ +.++++|++++..+|.+.+...+.+.++++++|++++|++|++.|+|... .++.++.|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~~~l 222 (319)
T 3pl2_A 146 FSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETE--PERAGRAL 222 (319)
T ss_dssp GSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCS--HHHHHHHH
T ss_pred ccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCC--HHHHHHHH
Confidence 7666666677777777666 66789999999999988888888889999999999999999999998753 46678889
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
+++|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+++
T Consensus 223 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~ 295 (319)
T 3pl2_A 223 LERGVELAIVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWP-------LEKVLRFANTAGALV 295 (319)
T ss_dssp HHTTCSEEEEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 9999999999999999999999889999999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhC
Q 015777 376 VMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++.|+..++|+++|+++++++
T Consensus 296 v~~~G~~~~~p~~~ev~~~l~~ 317 (319)
T 3pl2_A 296 ASRLECSTAMPTTDEVEASLNQ 317 (319)
T ss_dssp HTSSCSGGGCCCHHHHHHHCC-
T ss_pred HhccCCcCCCCCHHHHHHHHhc
Confidence 9999998889999999999876
No 3
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=6.9e-51 Score=396.22 Aligned_cols=310 Identities=28% Similarity=0.413 Sum_probs=269.9
Q ss_pred CCCcEEEEccceeecccCcCCCCccC-CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAE-SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~-~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|++|+|||++++|++...++..... .......+||++.|+|++|++||.++.++|. +|+
T Consensus 2 ~m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~ 62 (330)
T 3iq0_A 2 SLSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISC-------------------VGN 62 (330)
T ss_dssp --CEEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------EES
T ss_pred CCCCEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEE-------------------eCC
Confidence 35689999999999997643322211 1123568999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|++.||+++++.+.++.+|+.+++.++.+|+|++.+++..++...++++++..+.+++++++|++++...
T Consensus 63 D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~ 142 (330)
T 3iq0_A 63 DGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLF 142 (330)
T ss_dssp SHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCS
T ss_pred ChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhc
Confidence 99999999999999999999988888899999999999999977776656677778888888788999999999988765
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
.+...+.+.++++.++++|+++++||+++..+|... ..++.+.++++++|++++|++|++.|++.. +.+++++.+++
T Consensus 143 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~ 219 (330)
T 3iq0_A 143 SFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIP-EMRDALHFVLELTDIYMPSEGEVLLLSPHS--TPERAIAGFLE 219 (330)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSH-HHHHHHHHHHHTCSEECCBGGGTTTTCSCS--SHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcH-HHHHHHHHHHhhCCEEecCHHHHHHHhCCC--CHHHHHHHHHH
Confidence 566677888999999999999999999988877643 366778889999999999999999999875 34677888888
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+++|+
T Consensus 220 ~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~v~ 292 (330)
T 3iq0_A 220 EGVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFD-------AHRALQYANACGALAVT 292 (330)
T ss_dssp HTCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEEeCCCceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHc
Confidence 99999999999999999999889999999999999999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHhC
Q 015777 378 ERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~~~l~~ 397 (400)
+.|+.+++|++++|++++++
T Consensus 293 ~~G~~~~~p~~~ev~~~~~~ 312 (330)
T 3iq0_A 293 RRGPMEGTSRLMEIETFIQR 312 (330)
T ss_dssp SCSSSTTCCCHHHHHHHHHH
T ss_pred CcCCCCCCCCHHHHHHHHHh
Confidence 99998889999999998875
No 4
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=5.1e-50 Score=390.07 Aligned_cols=313 Identities=25% Similarity=0.426 Sum_probs=272.1
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
++++|+|+|++++|++....+.+......+...+||++.|+|++|++||.++.++|. +|+|
T Consensus 10 ~~~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~D 70 (332)
T 2qcv_A 10 REFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGK-------------------IADD 70 (332)
T ss_dssp CSEEEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEE-------------------ECSS
T ss_pred cCCcEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEE-------------------eCCC
Confidence 346899999999999988766665556678899999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecC-CCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDP-GARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~-~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
.+|+++++.|+++||+++++...+ +.+|+.+++.++.+|++++.+++...++..+++++++...+++++++|++++...
T Consensus 71 ~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~ 150 (332)
T 2qcv_A 71 QHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALS 150 (332)
T ss_dssp HHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGS
T ss_pred HHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCcccc
Confidence 999999999999999999998765 4689999998777888888887766677778888887777889999999887665
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC-CcHHHHHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED-PYDDAVVYKLF 296 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~-~~~~~~~~~l~ 296 (400)
.+.+.+.+.++++.++++|+++++||+.+...|...+...+.+.++++++|++++|++|++.|++... .+..+.+++++
T Consensus 151 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~ 230 (332)
T 2qcv_A 151 KSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLF 230 (332)
T ss_dssp STTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHH
Confidence 55566788899999999999999999988888876666677788899999999999999999998752 23456778888
Q ss_pred hCCCcEEEEEecCCcEEEEeC-CceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYTK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
++|++.|+||+|++|++++.+ ++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 231 ~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~aa~~ 303 (332)
T 2qcv_A 231 KHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKG-------IETALKYGSASASIV 303 (332)
T ss_dssp TSSCSEEEEECGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HcCCCEEEEEECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 899999999999999999988 668899999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhC
Q 015777 376 VMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++.|+.+.+|+++++++++++
T Consensus 304 v~~~G~~~~~p~~~ev~~~l~~ 325 (332)
T 2qcv_A 304 VSKHSSSDAMPSVEEIEALIEK 325 (332)
T ss_dssp HHC-----CCCCHHHHHHHHHH
T ss_pred HccCCCccCCCCHHHHHHHHhc
Confidence 9999998889999999998864
No 5
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=1.8e-50 Score=394.42 Aligned_cols=309 Identities=29% Similarity=0.422 Sum_probs=263.8
Q ss_pred CCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
|.++++|+|||++++|++...++. ......+...+||++.|+|++|++||.++.++|. +|
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG 82 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRPGP-LEHAEAFHKRTAGAETNVAIGLARLGLKVGWASR-------------------LG 82 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------EC
T ss_pred cCCCCCEEEEChhhhhccCCCCCc-cchhhheeecCCCHHHHHHHHHHhCCCcEEEEEE-------------------eC
Confidence 345678999999999999876542 3356678899999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCC-eeEEEecCCCccccCCccccchhhcCCccEEEEcccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE-REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSIS 215 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~-r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~ 215 (400)
+|.+|+++++.|+++||+++++.+.++.+|+.+++.++++|+ +.+.+++..++...+++++++.+.+++++++|++++.
T Consensus 83 ~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~ 162 (336)
T 4du5_A 83 TDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVF 162 (336)
T ss_dssp SSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSG
T ss_pred CCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCch
Confidence 999999999999999999999998888899999999988894 4555666677888889988888889999999988875
Q ss_pred c-cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHH
Q 015777 216 L-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYK 294 (400)
Q Consensus 216 ~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~ 294 (400)
. ..+...+.+.++++.+++.|+++++||++++.+|...+.+.+.+.++++++|++++|++|++.|+|..+ .+++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~--~~~~~~~ 240 (336)
T 4du5_A 163 PAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETT--PEGVARF 240 (336)
T ss_dssp GGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCS--HHHHHHH
T ss_pred hhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCC--HHHHHHH
Confidence 4 355566788899999999999999999999999988777788888999999999999999999999753 4677888
Q ss_pred HHhCCCcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 295 l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
+.++|++.|+||+|++|++++.+++.+++|+++++ ++|||||||+|.|||+++|++|++ +++|+++|+++|+
T Consensus 241 l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~-------l~~a~~~A~~~aa 313 (336)
T 4du5_A 241 YRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLG-------VPEAVKRGAWIGA 313 (336)
T ss_dssp HHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEecCCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 99999999999999999999999989999999997 999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHH
Q 015777 374 LTVMERGAIPALPTREAVLNA 394 (400)
Q Consensus 374 ~~v~~~G~~~~~p~~~~l~~~ 394 (400)
++|++.|+.+++|+++||+++
T Consensus 314 ~~v~~~G~~~~~p~~~ev~~~ 334 (336)
T 4du5_A 314 RAVQVLGDSEGLPTRAELNAA 334 (336)
T ss_dssp HHHC------CCCCHHHHHCC
T ss_pred HHhccCCCccCCCCHHHHHhc
Confidence 999999999889999999864
No 6
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=3.8e-52 Score=404.59 Aligned_cols=308 Identities=30% Similarity=0.550 Sum_probs=251.1
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.++++|+|||++++|++...++.|..+...+...+||++.|+|++|++||.++.++|. +|+
T Consensus 19 ~~~~~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG~ 79 (327)
T 3hj6_A 19 KGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISR-------------------LGA 79 (327)
T ss_dssp ---CCEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECE-------------------EES
T ss_pred cCCCCEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEE-------------------eCC
Confidence 4567899999999999999888888788889999999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI 217 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~ 217 (400)
|.+|+++++.|+++||+++++.+.++.+|+++++..+ +|++++.+++ +++..++++++..+.++++|++|++++.+.
T Consensus 80 D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~ 156 (327)
T 3hj6_A 80 DAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYR--EADMYLQEDDIIFELIKRSKVFHLSTFILS 156 (327)
T ss_dssp SHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEEC--SGGGGCCSCCCHHHHHC--CEEEEESHHHH
T ss_pred CHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEec-CCCccEEEec--ChhhhCChhhcCHhHhccCCEEEECchHhc
Confidence 9999999999999999999998888889999988765 6899888874 467777777777778899999999998766
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
.+.+.+.+.++++.++++|+++++||+++..+|...+...+.+.++++++|++++|++|++.|++..+. ++.++.+++
T Consensus 157 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~--~~~~~~l~~ 234 (327)
T 3hj6_A 157 RKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSP--ENYVKRYLE 234 (327)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCS--SGGGGGGTT
T ss_pred CchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHHHHHHh
Confidence 666778889999999999999999999988888765555677788899999999999999999998443 346677888
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhc
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVM 377 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~ 377 (400)
.|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|+++++
T Consensus 235 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~a~aa~~v~ 307 (327)
T 3hj6_A 235 LGVKAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYT-------VKRSIKLGNGVAAFKIR 307 (327)
T ss_dssp TTCSEEEEECSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCST-------THHHHHHHHCCCSSCC-
T ss_pred CCCCEEEEEECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHhc
Confidence 89999999999999999998889999999999999999999999999999999999 99999999999999999
Q ss_pred ccCCCCCCCCHHHHHHHHh
Q 015777 378 ERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 378 ~~G~~~~~p~~~~l~~~l~ 396 (400)
+.|+..++|++++++++++
T Consensus 308 ~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 308 GVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp -------------------
T ss_pred CCCCCCCCCCHHHHHHHhc
Confidence 9999889999999999875
No 7
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=4.4e-49 Score=385.70 Aligned_cols=310 Identities=23% Similarity=0.289 Sum_probs=267.8
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|+++|+|||++++|++.... .+..+...+...+||++.|+|++|++||.++.++|. +|+|
T Consensus 1 m~~~v~viG~~~~D~~~~~~-~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~D 60 (346)
T 3ktn_A 1 MSLKIAAFGEVMLRFTPPEY-LMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITK-------------------LPAN 60 (346)
T ss_dssp -CCEEEEECCCEEEEECSTT-CCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEE-------------------ECSS
T ss_pred CCCcEEEeChhhhhhcCCCC-CcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEe-------------------cCCC
Confidence 45789999999999997432 233356778899999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEe--cCCCccccCCccccc-hhhcCCccEEEEcccc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFY--RNPSADMLLQEAELD-LSLITKAKIFHYGSIS 215 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~--~~~~~~~~l~~~~l~-~~~i~~~~~v~~~~~~ 215 (400)
.+|+++++.|++.||+++++... +.+|+++++..+.+++++++.+ +..++...+++++++ .+.+++++++|++++.
T Consensus 61 ~~g~~i~~~l~~~gv~~~~v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~ 139 (346)
T 3ktn_A 61 RLGEAGKAALRKLGISDQWVGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGIS 139 (346)
T ss_dssp HHHHHHHHHHHHTTCBCTTEEEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHH
T ss_pred HHHHHHHHHHHHcCCcceEEEeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCcc
Confidence 99999999999999999999875 5699999998876667666554 555677778888887 4678999999999876
Q ss_pred c-cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCCh--HHHHHhHHhhhccCcEEEcCHhHHhcccCCC-CC-----
Q 015777 216 L-ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSA--DKAREGILSIWETADIIKISEEEISFLTQGE-DP----- 286 (400)
Q Consensus 216 ~-~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~--~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~-~~----- 286 (400)
. ..+...+.+.++++.++++|+++++||+++..+|... +...+.+.++++++|++++|++|++.|++.. ..
T Consensus 140 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 219 (346)
T 3ktn_A 140 LSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGE 219 (346)
T ss_dssp HHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHH
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccch
Confidence 4 3444567888999999999999999999998888743 5567788889999999999999999999987 32
Q ss_pred -cHHHHHHHHHhC-CCcEEEEEecCCc-------EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 287 -YDDAVVYKLFHA-NLKLLLVTEGPDG-------CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 287 -~~~~~~~~l~~~-g~~~vvvT~G~~G-------~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
+..+++++|.+. |++.|+||+|.+| ++++.+++.+++|+++++++|||||||+|+|||+++|++|++
T Consensus 220 ~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~---- 295 (346)
T 3ktn_A 220 AQETELIQRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWS---- 295 (346)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCC----
T ss_pred HHHHHHHHHHHHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCC----
Confidence 234556777764 9999999999998 988888888999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 358 EDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 358 ~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|+++|+++|++++++.|+.+ +|++++|++++++
T Consensus 296 ---l~~a~~~A~a~aa~~v~~~G~~~-~p~~~ev~~~l~~ 331 (346)
T 3ktn_A 296 ---LEKAVTFATVNGVLAHTIQGDIP-LTTVKQVNHVLEH 331 (346)
T ss_dssp ---HHHHHHHHHHHHHHHTTSSSSCC-CCCHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHHHhccCCCCC-CCCHHHHHHHHhc
Confidence 99999999999999999999986 8999999999875
No 8
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=2.5e-49 Score=382.21 Aligned_cols=305 Identities=27% Similarity=0.375 Sum_probs=268.1
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
|+|+|+|++++|++...++ +......+...+||++.|+|++++|||.++.++|. +|+|.+
T Consensus 2 ~~v~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~-------------------vG~D~~ 61 (313)
T 2v78_A 2 VDVIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIAR-------------------VGNDEF 61 (313)
T ss_dssp CCEEEECCCEEEEEESSSS-CGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------EESSHH
T ss_pred CeEEEECcceEEEecCCCC-cccccceeEecCCChHHHHHHHHHHCCCcEEEEEE-------------------eCCCHH
Confidence 5899999999999974332 22345667889999999999999999999999999 999999
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEE--EcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc-
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVT--LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI- 217 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~--~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~- 217 (400)
|+++++.|+++||+++++...++.+|+.+++. ++++|++++.+++..++...+++++++.+.+++++++|++++...
T Consensus 62 g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~ 141 (313)
T 2v78_A 62 GKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAI 141 (313)
T ss_dssp HHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHH
T ss_pred HHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhc
Confidence 99999999999999999988788899999998 888899998888766677778888887777889999999887542
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCc--EEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETAD--IIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~d--vl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
.+...+.+.++++.+++. ++||+.+..+|.+.+.+++.+.++++++| ++++|++|++.|++.. +.++.++++
T Consensus 142 ~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~--~~~~~~~~l 215 (313)
T 2v78_A 142 SDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVT--DPDEAYRKY 215 (313)
T ss_dssp CHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCC--CHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCC--CHHHHHHHH
Confidence 344566777777777654 89999988888766677778888999999 9999999999999864 345677888
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
++.|++.|+||+|++|++++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 216 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~a~~~aa~~ 288 (313)
T 2v78_A 216 KELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKD-------IEYSLAHGIAASTLV 288 (313)
T ss_dssp HHTTEEEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 8899999999999999999988888899999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++.|+.+++|++++++++++++
T Consensus 289 v~~~G~~~~~~~~~~v~~~~~~~ 311 (313)
T 2v78_A 289 ITVRGDNELTPTLEDAERFLNEF 311 (313)
T ss_dssp HTSSSSSTTCCCHHHHHHHHHHC
T ss_pred hccCCCCCCCCCHHHHHHHHHhc
Confidence 99999988889999999998875
No 9
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=7.9e-49 Score=378.09 Aligned_cols=300 Identities=30% Similarity=0.425 Sum_probs=262.4
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
|+|+|+|++++|++...++ +......+...+||++.|+|++|++||.++.++|. +|+|.+
T Consensus 2 ~~i~viG~~~~D~~~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------vG~D~~ 61 (309)
T 1v1a_A 2 LEVVTAGEPLVALVPQEPG-HLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGR-------------------VGEDEL 61 (309)
T ss_dssp CSEEEESCCEEEEECSSSS-CGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEE-------------------ECSSHH
T ss_pred CcEEEEccceEEEecCCCC-cccchheeeeecCcHHHHHHHHHHHcCCCeEEEEE-------------------eCCCHH
Confidence 5899999999999974332 22345667889999999999999999999999999 999999
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccccc-Cc
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI-TE 219 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~-~~ 219 (400)
|+++++.|+++||+++++...++ +|+++++.++.+|++++.+++..++...+++++++.+.+++++++|++++... .+
T Consensus 62 g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 140 (309)
T 1v1a_A 62 GAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSP 140 (309)
T ss_dssp HHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCH
T ss_pred HHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCc
Confidence 99999999999999999988888 99999999988899998887766677778888887778899999999987653 45
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCC
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g 299 (400)
...+.+.++++.++++|+++++||+.+..+|. .+.+.+.+.++++++|++++|++|++.|++.. +++++ +.|
T Consensus 141 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----~~~~~---~~g 212 (309)
T 1v1a_A 141 EARAFSLWAMEEAKRRGVRVSLDVNYRQTLWS-PEEARGFLERALPGVDLLFLSEEEAELLFGRV----EEALR---ALS 212 (309)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH----HHHHH---HTC
T ss_pred hHHHHHHHHHHHHHHcCCEEEEeCCCCcccCC-HHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH----HHHHH---hcC
Confidence 56678888999999999999999999888884 55666778889999999999999999999864 34443 789
Q ss_pred CcEEEEEecCCcEEEEeC-CceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 300 LKLLLVTEGPDGCRYYTK-DFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 300 ~~~vvvT~G~~G~~~~~~-~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
++.|+||+|++|+++ .+ ++.+++|+++++++|||||||+|+|||+++|++|++ +++|+++|+++|++++++
T Consensus 213 ~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~v~~ 284 (309)
T 1v1a_A 213 APEVVLKRGAKGAWA-FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLP-------VEERLRLANLLGASVAAS 284 (309)
T ss_dssp CSEEEEECGGGCEEE-EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEEecCCCeeE-ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcC
Confidence 999999999999998 65 677899999999999999999999999999999999 999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHhC
Q 015777 379 RGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 379 ~G~~~~~p~~~~l~~~l~~ 397 (400)
.|+.+++|+++++++++++
T Consensus 285 ~G~~~~~~~~~~v~~~~~~ 303 (309)
T 1v1a_A 285 RGDHEGAPYREDLEVLLKA 303 (309)
T ss_dssp STTTTTCCCHHHHTTCC--
T ss_pred CCCCcCCCCHHHHHHHHhh
Confidence 9998888999999887654
No 10
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=1e-49 Score=389.62 Aligned_cols=301 Identities=34% Similarity=0.533 Sum_probs=259.2
Q ss_pred CCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
|++|+|+|++++|++... ...+...+||++.|+|++|+|||.++.++|. +|+|.
T Consensus 24 m~~ilviG~~~~D~~~~~-------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG~D~ 77 (339)
T 1tyy_A 24 MNKVWVIGDASVDLVPEK-------QNSYLKCPGGASANVGVCVARLGGECGFIGC-------------------LGDDD 77 (339)
T ss_dssp -CCEEEESCCEEEEEECS-------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------ECSSH
T ss_pred cCCEEEECcceeEEeccC-------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEe-------------------eCCCH
Confidence 358999999999999863 3356778999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+|+++++.|+++||+++++.+.++.+|+++++.++++|+|++.+++..+++..++++ ..+.+++++++|++++.+..+
T Consensus 78 ~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~--~~~~l~~~~~v~~~~~~l~~~ 155 (339)
T 1tyy_A 78 AGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQ--DLPPFRQYEWFYFSSIGLTDR 155 (339)
T ss_dssp HHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGG--GCCCCCTTCEEEEEHHHHSSH
T ss_pred HHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcc--hhhHhccCCEEEEcchhhcCc
Confidence 999999999999999999998888899999998888899998887655677666655 235678899999988766566
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhCC
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHAN 299 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~g 299 (400)
.+.+.+.++++.++++|+++++||+++..+|.+.+.+.+.+.++++++|++++|++|++.|++..+. ++.++++++.|
T Consensus 156 ~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~--~~~~~~l~~~g 233 (339)
T 1tyy_A 156 PAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHW--QDARYYLRDLG 233 (339)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSG--GGGSSTTGGGT
T ss_pred ccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCH--HHHHHHHHHcC
Confidence 6678888999999999999999999988888766667777888999999999999999999987643 34556777889
Q ss_pred CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC-----CccccchHHHHHHHHHHHHHHHH
Q 015777 300 LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD-----FSLLQKEDQLRDALRFANACGAL 374 (400)
Q Consensus 300 ~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g-----~~~~~~~~~l~~al~~A~a~Aa~ 374 (400)
++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++| .+ +++|+++|+++|++
T Consensus 234 ~~~VvvT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~-------l~~a~~~A~a~aa~ 306 (339)
T 1tyy_A 234 CDTTIISLGADGALLITAEGEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHAL-------LAEAISNANACGAM 306 (339)
T ss_dssp CSCEEEECGGGCEEEESSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHH-------HHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCceEEEeCCceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhcccccccc-------HHHHHHHHHHHHHH
Confidence 9999999999999999888888999999999999999999999999999997 56 99999999999999
Q ss_pred HhcccCCCCCCCCHHHHHHHHhC
Q 015777 375 TVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 375 ~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++++.|+.+++|+++++++++++
T Consensus 307 ~v~~~G~~~~~p~~~ev~~~l~~ 329 (339)
T 1tyy_A 307 AVTAKGAMTALPFPDQLNTFLSS 329 (339)
T ss_dssp GGGSSSTTTTCCCHHHHHHHHC-
T ss_pred HhCCCCCCCCCCCHHHHHHHHhc
Confidence 99999998889999999998865
No 11
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=1.9e-48 Score=375.54 Aligned_cols=304 Identities=28% Similarity=0.441 Sum_probs=265.8
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
++|+|+|++++|++....+. ..+...+...+||++.|+|++|+|||.++.++|. +|+|.+
T Consensus 2 ~~v~viG~~~~D~~~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------vG~D~~ 61 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSPGP-LRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAK-------------------VGDDEF 61 (311)
T ss_dssp CEEEEESCCEEEEEESSSSC-GGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------EESSHH
T ss_pred CCEEEECCceEEEecCCCCc-ccccceeeecCCChHHHHHHHHHHCCCceEEEEE-------------------eCCCHH
Confidence 57999999999999843332 2245667889999999999999999999999999 999999
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCC--eeEEEecCCCccccCCccccchhhcCCccEEEEcccccc-
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE--REFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLI- 217 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~--r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~- 217 (400)
|+++++.|+++||+++++...++.+|+.+++.++++|+ |++.+++..++...+++++++.+.+++++++|++++...
T Consensus 62 g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 141 (311)
T 2dcn_A 62 GYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAI 141 (311)
T ss_dssp HHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHS
T ss_pred HHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCccccc
Confidence 99999999999999999988888899999999988898 888887766677778888887778899999999887552
Q ss_pred CchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 218 TEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 218 ~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
.+.+.+.+.++++.+++. ++||+.+..+|. .+..++.+.++++ ++|++++|++|++.|++.. +.++.++++
T Consensus 142 ~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~-~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~--~~~~~~~~l 214 (311)
T 2dcn_A 142 SSTAKEAVYKAFEIASNR----SFDTNIRLKLWS-AEEAKREILKLLSKFHLKFLITDTDDSKIILGES--DPDKAAKAF 214 (311)
T ss_dssp CHHHHHHHHHHHHHCSSE----EEECCCCTTTSC-HHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCC--CHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHh----CcCccCchhhCC-hHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCC--CHHHHHHHH
Confidence 445567777888777654 899999888886 5556677788999 9999999999999999874 345677888
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
++. ++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 215 ~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~ 286 (311)
T 2dcn_A 215 SDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFE-------MEKALDYAIVASTLN 286 (311)
T ss_dssp TTT-EEEEEEEEETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHH
T ss_pred HHh-CCEEEEEECCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 888 999999999999999998888899999999999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhCCC
Q 015777 376 VMERGAIPALPTREAVLNAIHAPV 399 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~~~ 399 (400)
+++.|+.+++|++++++++++++.
T Consensus 287 v~~~G~~~~~~~~~~v~~~~~~~~ 310 (311)
T 2dcn_A 287 VMIRGDQENLPTTKDIETFLREMK 310 (311)
T ss_dssp TTSSSSSTTCCCHHHHHHHHHHC-
T ss_pred hccCCCCCCCCCHHHHHHHHHhcc
Confidence 999999888999999999988753
No 12
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=2.8e-48 Score=376.99 Aligned_cols=305 Identities=24% Similarity=0.340 Sum_probs=259.1
Q ss_pred CCcEEEEccceeecccCcCCCCcc-----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCc
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLA-----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPK 134 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~-----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~ 134 (400)
+++|+|||++++|++......... ....+...+||++.|+|++|++||.++.++|.
T Consensus 5 ~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~------------------- 65 (325)
T 3h49_A 5 NLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSR------------------- 65 (325)
T ss_dssp CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECE-------------------
T ss_pred CCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEE-------------------
Confidence 468999999999996443211100 11356789999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSI 214 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~ 214 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.++++++++|+|+++++++ .+...++.++++.+.+.+++++|++++
T Consensus 66 vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (325)
T 3h49_A 66 IGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRN-GSLWKLNIDDVDFARFSQAKLLSLASI 144 (325)
T ss_dssp EESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTT-SHHHHCCGGGCCGGGGGGCSEEEEEEE
T ss_pred ECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccC-cccccCChhhcChhhhccCCEEEEecc
Confidence 9999999999999999999999998888889999999999999999887643 445567777887778899999999886
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHH
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYK 294 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~ 294 (400)
.....+..+.+.++++.+++++ .+++|++.++.+|... +.+.++++++|++++|++|++.|+|... .+++++.
T Consensus 145 ~~~~~~~~~~~~~~~~~a~~~~-~~~~d~~~~~~~~~~~----~~~~~~l~~~dil~~N~~E~~~l~g~~~--~~~~~~~ 217 (325)
T 3h49_A 145 FNSPLLDGKALTEIFTQAKARQ-MIICADMIKPRLNETL----DDICEALSYVDYLFPNFAEAKLLTGKET--LDEIADC 217 (325)
T ss_dssp TTSTTSCHHHHHHHHHHHHHTT-CEEEEEECCCSSCCCH----HHHHHHHTTCSEEECBHHHHHHHHTCSS--HHHHHHH
T ss_pred cCCcccCHHHHHHHHHHHHhcC-CEEEecCCchhhhhHH----HHHHHHHhhCCEEecCHHHHHHHhCCCC--HHHHHHH
Confidence 5443344567888999999998 6778887777777543 3456678899999999999999998764 4567788
Q ss_pred HHhCCCcEEEEEecCCcEEEEeCCceEEEccccc-cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 295 LFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 295 l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
+.+.|++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|+
T Consensus 218 l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa 290 (325)
T 3h49_A 218 FLACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKN-------LRECARFANATAA 290 (325)
T ss_dssp HHTTTCSEEEEECTTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEeCCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 8899999999999999999999998899999886 8999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 374 LTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 374 ~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++.|+.+++|++++++++++++
T Consensus 291 ~~v~~~G~~~~~p~~~ev~~~l~~~ 315 (325)
T 3h49_A 291 ISVLSVGATTGVKNRKLVEQLLEEY 315 (325)
T ss_dssp HHHTSSSSSSSCSSSHHHHTC----
T ss_pred HHHcccCCCCCCCCHHHHHHHHHhc
Confidence 9999999998999999999988764
No 13
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=7.2e-48 Score=377.82 Aligned_cols=310 Identities=18% Similarity=0.266 Sum_probs=255.5
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
.||++|++||++++|+.+. .+.|..+...+...+||+++|+|++|+|||.++.++|. ||+
T Consensus 22 ~mm~kv~~~GE~m~~l~p~-~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~-------------------vG~ 81 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQ-QGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATV-------------------VPA 81 (351)
T ss_dssp ---CEEEEECCCEEEEECC-TTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEE-------------------ECS
T ss_pred hccCCEEEEcceeEEecCC-CCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEE-------------------eCC
Confidence 4677999999999999876 34566678888999999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc-hhhcCCccEEEEccccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD-LSLITKAKIFHYGSISL 216 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~-~~~i~~~~~v~~~~~~~ 216 (400)
|.+|+++++.|+++||+++++...++.+|+.+++..+..+++.+.+++...+...+...++. .+++++++++|++++.+
T Consensus 82 D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l 161 (351)
T 4gm6_A 82 NPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITI 161 (351)
T ss_dssp SHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHH
T ss_pred CHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccch
Confidence 99999999999999999999998888666666666667778888888776665555555554 36789999999998765
Q ss_pred -cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 217 -ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 217 -~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
..+...+.+.++++.++++|++++|||++|+.+|. .+..++.+.++++++|++++|++|++.+++...... +..+.+
T Consensus 162 ~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~-~~~~~~ 239 (351)
T 4gm6_A 162 ALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWE-LEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETT-DYYQAM 239 (351)
T ss_dssp HHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSC-HHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCS-CHHHHH
T ss_pred hhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhh-hhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchh-HHHHHH
Confidence 45556788899999999999999999999999995 566788888999999999999999999998765432 222222
Q ss_pred HhC--------CCcEEEEEec--CCcEEEEeCCceEEEccccc-cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 296 FHA--------NLKLLLVTEG--PDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 296 ~~~--------g~~~vvvT~G--~~G~~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
.+. +.+.++++.+ ..|..++..++.++.+++++ ++||||||||+|+|||+++|++|++ +++|
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~-------~~~a 312 (351)
T 4gm6_A 240 HDKYPNIELFYATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWR-------PDET 312 (351)
T ss_dssp HHHCTTCCEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCC-------HHHH
T ss_pred HhhhhhhhhhhccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCC-------HHHH
Confidence 221 2233444443 44667788888888888776 8999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|+++||++|++.|+.+.+| .++|++++.+
T Consensus 313 l~~A~aaaal~v~~~Ga~~~~~-~~ev~~~l~~ 344 (351)
T 4gm6_A 313 VKFATAAAGLKHSIHGDINPFD-EKTIADFAAD 344 (351)
T ss_dssp HHHHHHHHHHHTTSSSSSCCCC-HHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCCCCCCCC-HHHHHHHHhC
Confidence 9999999999999999998876 5789998864
No 14
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=2.6e-48 Score=373.39 Aligned_cols=292 Identities=27% Similarity=0.340 Sum_probs=257.5
Q ss_pred CCCcEEEEccceeecccCcCCCCcc-----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA-----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~-----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
||++|+|+|++++|++..+++.|.. +...+...+||++.|+|++|++||.++.++|.
T Consensus 1 Mm~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~------------------ 62 (304)
T 3ry7_A 1 MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITK------------------ 62 (304)
T ss_dssp -CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECE------------------
T ss_pred CCCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEE------------------
Confidence 4578999999999999988887654 34467889999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEE
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHY 211 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~ 211 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.+++.++++|+++++++ .++...+++++++. +.+++++++|+
T Consensus 63 -vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~~v~~ 139 (304)
T 3ry7_A 63 -IGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVY--GGANMTMTPEDVINAKDAIINADFVVA 139 (304)
T ss_dssp -EESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEE--CGGGGGCCHHHHHTTHHHHHTCSEEEE
T ss_pred -eCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEe--cCchhcCCHHHHHHHHHHhccCCEEEE
Confidence 99999999999999999999999988888899999999999999998877 45666777776653 46889999998
Q ss_pred ccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---H
Q 015777 212 GSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---D 288 (400)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~---~ 288 (400)
++ +.+.+.+.++++.++++|+++++||+... +.+.++++++|++++|++|++.|++....+ .
T Consensus 140 ~~-----~~~~~~~~~~~~~a~~~~~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~ 204 (304)
T 3ry7_A 140 QL-----EVPIPAIISAFEIAKAHGVTTVLNPAPAK----------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSM 204 (304)
T ss_dssp ET-----TSCHHHHHHHHHHHHHTTCEEEEECCSCC----------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHH
T ss_pred cC-----CCCHHHHHHHHHHHHHcCCEEEEeCCccc----------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHH
Confidence 64 23467888999999999999999997532 234557889999999999999999987543 2
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC-CccccchHHHHHHHHH
Q 015777 289 DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD-FSLLQKEDQLRDALRF 367 (400)
Q Consensus 289 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g-~~~~~~~~~l~~al~~ 367 (400)
.+.++++++.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++| ++ +++|+++
T Consensus 205 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~-------~~~a~~~ 277 (304)
T 3ry7_A 205 KDNANYFLSIGIKTVLITLGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDN-------LADAIDF 277 (304)
T ss_dssp HHHHHHHHHTTCCEEEEECGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTT-------HHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCC-------HHHHHHH
Confidence 456678888999999999999999999988899999999999999999999999999999999 99 9999999
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHH
Q 015777 368 ANACGALTVMERGAIPALPTREAVLN 393 (400)
Q Consensus 368 A~a~Aa~~v~~~G~~~~~p~~~~l~~ 393 (400)
|+++|++++++.|+.+++|+++|+++
T Consensus 278 A~~~aa~~~~~~G~~~~~p~~~ev~~ 303 (304)
T 3ry7_A 278 GNKASSLTVQKHGAQASIPLLEEVNQ 303 (304)
T ss_dssp HHHHHHTTSCCCCTGGGCCCHHHHHT
T ss_pred HHHHHHHHhCCCCccccCCCHHHHhh
Confidence 99999999999999989999999985
No 15
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=1.1e-47 Score=370.74 Aligned_cols=297 Identities=34% Similarity=0.565 Sum_probs=260.7
Q ss_pred CCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCCh
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADE 139 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~ 139 (400)
|++|+|+|++++|++...++. ..+...+...+||++.|+|++|++||.++.++|. +|+|.
T Consensus 1 M~~v~viG~~~iD~~~~~~g~-~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~-------------------vG~D~ 60 (313)
T 3ewm_A 1 MSLIASIGELLIDLISVEEGD-LKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISK-------------------VGNDP 60 (313)
T ss_dssp -CEEEEESCCEEEEEESSSSC-TTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEE-------------------EESSH
T ss_pred CCcEEEECceeeeeecCCCCC-cccccceeecCCCHHHHHHHHHHHCCCCeEEEEE-------------------eCCCH
Confidence 468999999999999875442 2356678899999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCc
Q 015777 140 FGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITE 219 (400)
Q Consensus 140 ~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~ 219 (400)
+|+++++.|+++||+++++.+.++.+|+++++.++. |+++++++. ..+...+++++++.+.+++++++|++++.+..+
T Consensus 61 ~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~-~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~ 138 (313)
T 3ewm_A 61 FGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYD-DVAYFNMTLNDINWDIVEEAKIVNFGSVILARN 138 (313)
T ss_dssp HHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSS-SSCEEEECC-SSGGGCCCGGGCCHHHHHHCSEEEEESGGGGST
T ss_pred HHHHHHHHHHHcCCCccceeecCCCCceEEEEEecC-CCcceEeec-cCHHHhCChhhCCHHHhCCCCEEEEcCcccCCc
Confidence 999999999999999999988888899999998765 999988873 345567888888877888999999999877667
Q ss_pred hhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCC-ChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHhC
Q 015777 220 PCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWP-SADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFHA 298 (400)
Q Consensus 220 ~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~~ 298 (400)
.+.+.+.++++.++ .++++++||+++..+|. ..+.+.+.+.++++++|++++|++|++.|++.... ..
T Consensus 139 ~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~----------~~ 207 (313)
T 3ewm_A 139 PSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE----------VK 207 (313)
T ss_dssp THHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC----------CC
T ss_pred chHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc----------cc
Confidence 77788889999888 47999999999888887 55667788888999999999999999998875432 13
Q ss_pred CCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHH--cCCccccchHHHHHHHHHHHHHHHHHh
Q 015777 299 NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLS--TDFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 299 g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~--~g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
+.+.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|+ +|++ +++|+++|+++|+++|
T Consensus 208 ~~~~vviT~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~-------l~~a~~~A~~~aa~~v 280 (313)
T 3ewm_A 208 GSMLTAITLGPKGCRLIKNETVVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLD-------LLKLGKFANLVAALST 280 (313)
T ss_dssp CSSEEEEECGGGEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCC-------HHHHHHHHHHHHHHHT
T ss_pred CceEEEEEECCCCeEEEECCeeEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHHHH
Confidence 466789999999999999998999999999999999999999999999999 9999 9999999999999999
Q ss_pred cccCCCCCCCCHHHHHHHHhC
Q 015777 377 MERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 377 ~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++.|+.+ +|++++|++++++
T Consensus 281 ~~~G~~~-~p~~~ev~~~l~~ 300 (313)
T 3ewm_A 281 QKRGAWS-TPRKDELLKYKEA 300 (313)
T ss_dssp TSCSSCC-CCCHHHHTTSHHH
T ss_pred ccCCCCC-CCCHHHHHHHHHH
Confidence 9999964 8999999988754
No 16
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=3.2e-47 Score=367.45 Aligned_cols=286 Identities=25% Similarity=0.281 Sum_probs=247.3
Q ss_pred CCccCCCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeee
Q 015777 53 ETKETRESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVI 128 (400)
Q Consensus 53 ~~~~~~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~ 128 (400)
+++..+||++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|++||.++.++|.
T Consensus 12 ~~~~~~mm~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~------------- 78 (310)
T 3go6_A 12 ETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGA------------- 78 (310)
T ss_dssp -------CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------
T ss_pred hhccccccCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEE-------------
Confidence 3344467889999999999999988877654 34567889999999999999999999999999
Q ss_pred ccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccE
Q 015777 129 ILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKI 208 (400)
Q Consensus 129 ~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~ 208 (400)
+|+|.+|+++++.|+++||+++++... +.+|+.+++.++++|+|+++.++ ++...++ ++ .+.++++++
T Consensus 79 ------vG~D~~g~~i~~~L~~~gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~--~~-~~~l~~~~~ 146 (310)
T 3go6_A 79 ------FGDDPAAAQLRAHLRANAVGLDRTVTV-PGPSGTAIIVVDASAENTVLVAP--GANAHLT--PV-PSAVANCDV 146 (310)
T ss_dssp ------ECSSHHHHHHHHHHHHTTCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEEC--GGGGGCC--CC-TTTTTTCSE
T ss_pred ------ECCCHHHHHHHHHHHHcCCccceeEec-CCCCCEEEEEEcCCCCEEEEecC--ChhhhHH--HH-HHHhhcCCE
Confidence 999999999999999999999999754 45999999999999999998874 4554555 44 467889999
Q ss_pred EEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH
Q 015777 209 FHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD 288 (400)
Q Consensus 209 v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~ 288 (400)
+|+++. .+.+.+.++++.+++.|+++++|++++.. .++.+.++++++|++++|++|++.|++.
T Consensus 147 v~~~~~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-------~~~~~~~ll~~~dil~~N~~Ea~~l~g~----- 209 (310)
T 3go6_A 147 LLTQLE-----IPVATALAAARAAQSADAVVMVNASPAGQ-------DRSSLQDLAAIADVVIANEHEANDWPSP----- 209 (310)
T ss_dssp EEECSS-----SCHHHHHHHHHHHHHTTCEEEEECCSSSC-------CHHHHHHHHHHCSEEEEEHHHHHHSSSC-----
T ss_pred EEECCC-----CCHHHHHHHHHHHHHcCCEEEEcCCcccc-------chHHHHHHHhhCCEEEeCHHHHHHHhCC-----
Confidence 998752 34677889999999999999999986432 2455667889999999999999999875
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc----CCccccchHHHHHH
Q 015777 289 DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST----DFSLLQKEDQLRDA 364 (400)
Q Consensus 289 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~----g~~~~~~~~~l~~a 364 (400)
++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++ |++ +++|
T Consensus 210 -----------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~-------l~~a 271 (310)
T 3go6_A 210 -----------PTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPAE-------RLRA 271 (310)
T ss_dssp -----------CSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHH-------HHHH
T ss_pred -----------CCEEEEEECCCCEEEEECCceEEeCCCCCCcCcCCCchHHHHHHHHHHHHhcccCCCC-------HHHH
Confidence 689999999999999999989999999999999999999999999999999 877 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|+++|+++|++.|+.+++|+++|+++++++.
T Consensus 272 ~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 305 (310)
T 3go6_A 272 LRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 305 (310)
T ss_dssp HHHHHHHHHHHTTSSCSTTCCCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHhc
Confidence 9999999999999999998999999999999874
No 17
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=3.5e-47 Score=366.41 Aligned_cols=297 Identities=25% Similarity=0.336 Sum_probs=256.5
Q ss_pred CCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCC
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
.++++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|+|||.++.++|.
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~------------------ 63 (309)
T 1rkd_A 2 QNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIAC------------------ 63 (309)
T ss_dssp --CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEE------------------
T ss_pred CCCCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEE------------------
Confidence 34568999999999999988877654 23467789999999999999999999999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEEE
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFHY 211 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~~ 211 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.+++.++++|++++.++ .+++..+++++++. +.+++++++|+
T Consensus 64 -vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~v~~ 140 (309)
T 1rkd_A 64 -TGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIH--AGANAALSPALVEAQRERIANASALLM 140 (309)
T ss_dssp -EESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEE--CGGGGGCCHHHHHTTHHHHHHCSEEEE
T ss_pred -ECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEe--CCchhcCCHHHHHHHHHhcccCCEEEE
Confidence 99999999999999999999999988788899999999998899998876 45556677776653 46778999998
Q ss_pred ccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---H
Q 015777 212 GSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY---D 288 (400)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~---~ 288 (400)
++. .+.+.+.++++.+++.|+++++||+++.. | ..++++++|++++|++|++.|++....+ .
T Consensus 141 ~~~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-~---------~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~ 205 (309)
T 1rkd_A 141 QLE-----SPLESVMAAAKIAHQNKTIVALNPAPARE-L---------PDELLALVDIITPNETEAEKLTGIRVENDEDA 205 (309)
T ss_dssp CSS-----SCHHHHHHHHHHHHHTTCEEEECCCSCCC-C---------CHHHHTTCSEECCCHHHHHHHHSCCCSSHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHcCCEEEEECCcccc-c---------hHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHH
Confidence 642 23467788899999999999999987532 1 2347789999999999999999875432 2
Q ss_pred HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHH
Q 015777 289 DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFA 368 (400)
Q Consensus 289 ~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A 368 (400)
.+.++++++.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|+|+++|++|++ +++|+++|
T Consensus 206 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~-------~~~a~~~a 278 (309)
T 1rkd_A 206 AKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKP-------LPEAIRFA 278 (309)
T ss_dssp HHHHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEECCCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCC-------HHHHHHHH
Confidence 45567888899999999999999999998888899999999999999999999999999999999 99999999
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 369 NACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 369 ~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|++++++.|+.+.+|+++++++++++
T Consensus 279 ~~~aa~~~~~~G~~~~~p~~~ev~~~~~~ 307 (309)
T 1rkd_A 279 HAAAAIAVTRKGAQPSVPWREEIDAFLDR 307 (309)
T ss_dssp HHHHHHHHTSSSSGGGCCCHHHHHHHHHT
T ss_pred HHHHHHHcCCCCccCCCCCHHHHHHHHhc
Confidence 99999999999998788999999998864
No 18
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=7.4e-47 Score=367.67 Aligned_cols=297 Identities=25% Similarity=0.405 Sum_probs=259.7
Q ss_pred CCCCCCCccCCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHc--CCCceeeecccccccccce
Q 015777 48 GDGLSETKETRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARL--GGSSAFIGKTTLFCFYEHV 125 (400)
Q Consensus 48 ~~~~~~~~~~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larL--G~~~~~i~~~~~~~~~~~~ 125 (400)
++++... +|++|+|||++++|++.... ...+...+||++.|+|++|+|| |.++.++|.
T Consensus 15 ~~~y~~~----~m~~i~viG~~~iD~~~~~~------~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~---------- 74 (328)
T 4e69_A 15 TENLYFQ----SMMHILSIGECMAELAPADL------PGTYRLGFAGDTFNTAWYLARLRPESRISYFSA---------- 74 (328)
T ss_dssp CBCSSCB----SSCEEEEESCCEEEEEECSS------TTEEEEEEECHHHHHHHHHHHHCTTSEEEEECE----------
T ss_pred ccccccc----cCCcEEEecCcEEEEecCCC------CCceEEecCCHHHHHHHHHHhcCCCCcEEEEEe----------
Confidence 4455544 45789999999999998621 1467789999999999999999 899999999
Q ss_pred eeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccc-cCCccccchhhcC
Q 015777 126 KVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM-LLQEAELDLSLIT 204 (400)
Q Consensus 126 ~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~-~l~~~~l~~~~i~ 204 (400)
+|+|.+|+++++.|+++||+++++.+.++.+|+.+++.++ +|+|+++++++..... .++.+++..+.++
T Consensus 75 ---------vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (328)
T 4e69_A 75 ---------IGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALAAAMA 144 (328)
T ss_dssp ---------ECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHHHHHT
T ss_pred ---------eCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccchHHhc
Confidence 9999999999999999999999999888889999999999 9999999886654432 2344444457789
Q ss_pred CccEEEEccccc--cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccC
Q 015777 205 KAKIFHYGSISL--ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282 (400)
Q Consensus 205 ~~~~v~~~~~~~--~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~ 282 (400)
++|++|++++.+ ..+...+.+.++++.+++.++++++||++++.+|.+.+..++.+.++++++|++++|++|++.|+|
T Consensus 145 ~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 224 (328)
T 4e69_A 145 RADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFG 224 (328)
T ss_dssp TCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcC
Confidence 999999998654 235567788899999999999999999988888977777888888999999999999999999998
Q ss_pred CCCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccc-ccccCCCCchHHHHHHHHHHHHcCCccccchHHH
Q 015777 283 GEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361 (400)
Q Consensus 283 ~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l 361 (400)
.. +.+++++.+.++|++.|+||+|++|++++++++.+++|+++ ++++|||||||+|+|+|+++|++|++ +
T Consensus 225 ~~--~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------l 295 (328)
T 4e69_A 225 DA--GPDATADRYARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQP-------L 295 (328)
T ss_dssp CS--SHHHHHHHHHTTTCSEEEEBCTTSCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCC-------H
T ss_pred CC--CHHHHHHHHHhcCCCEEEEEeCCCCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCC-------H
Confidence 76 34677888999999999999999999999999899999986 79999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHhcccCCCC
Q 015777 362 RDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 362 ~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
++|+++|+++|+++|++.|+.+
T Consensus 296 ~~a~~~A~~~aa~~v~~~Ga~~ 317 (328)
T 4e69_A 296 ETAIAAAAALAGQVVQGKGALV 317 (328)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSC
T ss_pred HHHHHHHHHHHHHHHccCCCcC
Confidence 9999999999999999999865
No 19
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=6.6e-47 Score=370.28 Aligned_cols=293 Identities=24% Similarity=0.308 Sum_probs=256.4
Q ss_pred CCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCc
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPK 134 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~ 134 (400)
++++|+|||++++|++..+++.|.. ....+...+||++.|+|++|++||.++.++|.
T Consensus 28 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~------------------- 88 (343)
T 2rbc_A 28 GGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGA------------------- 88 (343)
T ss_dssp CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------
T ss_pred cCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEE-------------------
Confidence 3458999999999999888776543 23456788999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSI 214 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~ 214 (400)
+|+|.+|+++++.|+++||+++++.+.++.+|+.++++++++|+|+++++++ ....++++++..+.+++++++|++++
T Consensus 89 vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~--~~~~~~~~~l~~~~l~~~~~v~~~~~ 166 (343)
T 2rbc_A 89 VGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYD--HRLHEKKRACTPEDIALFDAVLVDVR 166 (343)
T ss_dssp EESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECC--GGGGSSCCCCCHHHHTTCSEEEECSS
T ss_pred eCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCC--CcccCChhHhcHhhhCCCCEEEEcCC
Confidence 9999999999999999999999998888889999999999899999877644 44556667776677889999999875
Q ss_pred cccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHh-hhccCcEEEcCHhHHhcccCCCCCcHHHHHH
Q 015777 215 SLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILS-IWETADIIKISEEEISFLTQGEDPYDDAVVY 293 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~-ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~ 293 (400)
. .+...++++.+++.++++++||... .+.+.+ +++++|++++|++|++.|++.. +.+++++
T Consensus 167 ~------~~~~~~~~~~a~~~g~~v~~Dp~~~----------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~--~~~~~~~ 228 (343)
T 2rbc_A 167 W------PELALDVLTVARALGKPAILDGDVA----------PVETLEGLAPAATHIVFSEPAATRLTGLE--TVKDMLP 228 (343)
T ss_dssp S------HHHHHHHHHHHHHTTCCEEEEECSC----------CHHHHHHHGGGCSEEEEEHHHHHHHHCCS--SHHHHHH
T ss_pred C------HHHHHHHHHHHHHCCCEEEEECCcc----------ccccHHHHHhcCCEEEeCHHHHHHHcCCC--CHHHHHH
Confidence 3 2467788899999999999999631 234555 7889999999999999999875 3456778
Q ss_pred HHHhCCC-cEEEEEecCCcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHH
Q 015777 294 KLFHANL-KLLLVTEGPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 370 (400)
Q Consensus 294 ~l~~~g~-~~vvvT~G~~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a 370 (400)
.+.+.|+ +.|+||+|++|++++.++ +.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|++
T Consensus 229 ~l~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~ 301 (343)
T 2rbc_A 229 VLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQ-------SRAAVRLSSV 301 (343)
T ss_dssp HHHHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHH
T ss_pred HHHHhCCCceEEEEECCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHH
Confidence 8888999 999999999999999887 78899999999999999999999999999999999 9999999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 371 CGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 371 ~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+|++++++.|+.+++|+++++++++++
T Consensus 302 ~aa~~v~~~G~~~~~p~~~ev~~~l~~ 328 (343)
T 2rbc_A 302 AAALKCTVFGGRIGAPTREETEEAMRQ 328 (343)
T ss_dssp HHHHHHTSSSGGGGCCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCccCCCCHHHHHHHHHh
Confidence 999999999998778999999998865
No 20
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=3.2e-47 Score=368.58 Aligned_cols=291 Identities=23% Similarity=0.326 Sum_probs=248.7
Q ss_pred CCCCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcC----CCceeeecccccccccceeeeccCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLG----GSSAFIGKTTLFCFYEHVKVIILPC 132 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG----~~~~~i~~~~~~~~~~~~~~~~~~~ 132 (400)
|.|+++|+|||++++|++... ..+...+||++.|+|++|+||| .++.++|.
T Consensus 1 m~m~~~i~viG~~~~D~~~~~--------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~----------------- 55 (319)
T 3lhx_A 1 MSLSKKIAVIGECMIELSEKG--------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTA----------------- 55 (319)
T ss_dssp ---CEEEEEESCCEEEEEC-----------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECE-----------------
T ss_pred CCccCceeeechhhhhhccCC--------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEE-----------------
Confidence 345568999999999998753 3467899999999999999999 89999999
Q ss_pred CcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCC-ccccCCccccc--hhhcCCccEE
Q 015777 133 PKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPS-ADMLLQEAELD--LSLITKAKIF 209 (400)
Q Consensus 133 ~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~-~~~~l~~~~l~--~~~i~~~~~v 209 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.+++.++++|+|+++++++.. +...+++++++ .+.+++++++
T Consensus 56 --vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 133 (319)
T 3lhx_A 56 --LGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYL 133 (319)
T ss_dssp --ECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEE
T ss_pred --eCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEE
Confidence 999999999999999999999999988888999999999989999999886543 33345554443 2578899999
Q ss_pred EEccccc--cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc
Q 015777 210 HYGSISL--ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY 287 (400)
Q Consensus 210 ~~~~~~~--~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~ 287 (400)
|++++.+ ..+.+.+.+.++++.++++|+++++||+++..+|.+.+...+.+.++++++|++++|++|++.|+|.. +
T Consensus 134 ~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~--~ 211 (319)
T 3lhx_A 134 YLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQ--P 211 (319)
T ss_dssp EEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCC--C
T ss_pred EEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCC--C
Confidence 9988654 23455678889999999999999999999888898877888888899999999999999999999874 3
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceE-EEccc---cccccCCCCchHHHHHHHHHHHHcCCccccchHHHHH
Q 015777 288 DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSG-RVQGL---KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRD 363 (400)
Q Consensus 288 ~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~-~vpa~---~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~ 363 (400)
.++++++++++|++.|+||+|++|++++++++.+ ++|++ +++++|||||||+|+|||+++|++|++ +++
T Consensus 212 ~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-------~~~ 284 (319)
T 3lhx_A 212 VEDVIARTHNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGS-------AEN 284 (319)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCC-------HHH
T ss_pred HHHHHHHHHhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCC-------HHH
Confidence 4677888999999999999999999999988655 88986 678999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHhcccCCCC
Q 015777 364 ALRFANACGALTVMERGAIP 383 (400)
Q Consensus 364 al~~A~a~Aa~~v~~~G~~~ 383 (400)
|+++|+++|++++++.|+.+
T Consensus 285 a~~~A~~~aa~~v~~~Ga~~ 304 (319)
T 3lhx_A 285 AAKRGHLTASTVIQYRGAII 304 (319)
T ss_dssp HHHHHHHHHHHHTTSSSSSC
T ss_pred HHHHHHHHHHhhhccCCCcC
Confidence 99999999999999999864
No 21
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=5.5e-47 Score=368.38 Aligned_cols=299 Identities=19% Similarity=0.210 Sum_probs=257.0
Q ss_pred CCCCcEEEEccceeecccCcCCCCccCC---CCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCc
Q 015777 58 RESPLVVCFGEMLIDFVPTVSGLSLAES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPK 134 (400)
Q Consensus 58 ~~~~~v~viG~~~vD~~~~~~~~~~~~~---~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~ 134 (400)
.++++|+|+|++++|++..+++.|.... ..+...+||++.|+|++|++||.++.++|.
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~------------------- 64 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSI------------------- 64 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECE-------------------
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEE-------------------
Confidence 4567899999999999998887665421 146789999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYG 212 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~ 212 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.++++++++|+|.+.+.. ++....++++.++ .+.+..+++++++
T Consensus 65 vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (328)
T 3kzh_A 65 LGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIAD-MKSIGAMNTDFIDSKREIFENAEYTVLD 143 (328)
T ss_dssp ECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEE-CGGGGGCCHHHHHHTHHHHHTCSEEEEE
T ss_pred ecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEc-hhhhhhCCHHHHHHHHHhhccCCEEEEe
Confidence 999999999999999999999999888888999999999999999886542 4455556665554 2567899999987
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcH---H
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYD---D 289 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~---~ 289 (400)
+.. + +.+..+++ +++.++++++||+. ....+.+.++++++|++++|++|++.|++....+. +
T Consensus 144 ~~~-----~-~~~~~l~~-a~~~~~~v~~D~~~--------~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~ 208 (328)
T 3kzh_A 144 SDN-----P-EIMEYLLK-NFKDKTNFILDPVS--------AEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLI 208 (328)
T ss_dssp SSC-----H-HHHHHHHH-HHTTTSEEEEECCS--------HHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHH
T ss_pred CCc-----H-HHHHHHHH-HhhcCCcEEEEeCC--------HHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHH
Confidence 632 2 56666666 88899999999963 22345577789999999999999999999765432 4
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
++++.+++.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+
T Consensus 209 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~-------~~~a~~~A~ 281 (328)
T 3kzh_A 209 KASNYFLGLGIKKVFISLDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMP-------IEDIVKFAM 281 (328)
T ss_dssp HHHHHHHHHTCCEEEEECGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEeCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 5567888889999999999999999998888999999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|+++|++.|+.++.|+++++++++++.
T Consensus 282 a~aa~~v~~~G~~~~~~~~~~v~~~~~~~ 310 (328)
T 3kzh_A 282 TMSNITISHEETIHPDMALDTVLAKLEKT 310 (328)
T ss_dssp HHHHHHHTSSSSSCTTCSHHHHHHHHHTC
T ss_pred HHHHHHhcCCCCCCCcCCHHHHHHHhhhc
Confidence 99999999999998999999999999864
No 22
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=1.2e-46 Score=369.71 Aligned_cols=300 Identities=23% Similarity=0.328 Sum_probs=260.3
Q ss_pred CCcEEEEccceeecccCcCCC-------CccC---------------CCCceecCCChHHHHHHHHHHcCCCceeeeccc
Q 015777 60 SPLVVCFGEMLIDFVPTVSGL-------SLAE---------------SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTT 117 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~-------~~~~---------------~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~ 117 (400)
+++|+|+|++++|++..++.. +... .......+||++.|+|+++++||.++.++|.
T Consensus 25 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~-- 102 (352)
T 4e3a_A 25 RFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGN-- 102 (352)
T ss_dssp SEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECC--
T ss_pred cccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEE--
Confidence 468999999999999988752 2111 1234678999999999999999999999999
Q ss_pred ccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccc
Q 015777 118 LFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAE 197 (400)
Q Consensus 118 ~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~ 197 (400)
+|+|.+|+++++.|++.||+++++...++.+|+.++++++++|+|++..+ .++...+++++
T Consensus 103 -----------------vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~--~ga~~~l~~~~ 163 (352)
T 4e3a_A 103 -----------------VAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTY--LGACVELGPED 163 (352)
T ss_dssp -----------------CCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEE--CGGGGGCCGGG
T ss_pred -----------------ECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEec--cChhhcCChhh
Confidence 99999999999999999999999988777899999999999999999877 45667788888
Q ss_pred cchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cCcEEEcCHh
Q 015777 198 LDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEE 275 (400)
Q Consensus 198 l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dvl~~N~~ 275 (400)
++.+.+++++++|++++....+...+.+.++++.++++|+++++|++... ..+..++.+.++++ ++|++++|++
T Consensus 164 ~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~l~~ll~~~~~dil~~N~~ 239 (352)
T 4e3a_A 164 VEADVVADAKVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSF----CVDRYRGEFLDLMRSGKVDIVFANRQ 239 (352)
T ss_dssp CCHHHHHTEEEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHH----HHHHHHHHHHHHHHTTSCCEEEEEHH
T ss_pred CCHHHHhhCCEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchh----hHHHHHHHHHHHhcccCCcEEEeCHH
Confidence 88888999999999988765666778889999999999999999996311 12345667788898 8999999999
Q ss_pred HHhcccCCCCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 276 EISFLTQGEDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 276 E~~~l~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
|++.|++..+ .+++++.+.. +++.|+||+|++|++++.+++.+++|+++++ ++|||||||+|+|||+++|++|++
T Consensus 240 Ea~~l~g~~~--~~~a~~~l~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~- 315 (352)
T 4e3a_A 240 EALSLYQTDD--FEEALNRIAA-DCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRS- 315 (352)
T ss_dssp HHHHHTTCSC--HHHHHHHHHH-HSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-
T ss_pred HHHHHhCCCC--HHHHHHHHhc-CCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCC-
Confidence 9999999754 3456666654 7899999999999999999999999999986 899999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 015777 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNA 394 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~ 394 (400)
+++|+++|+++|+++|++.|+.+.+|.++.+++.
T Consensus 316 ------l~~a~~~A~~aAa~~v~~~G~~~~~~~~~~~~~~ 349 (352)
T 4e3a_A 316 ------LEDCGKLGCLAAGIVIQQIGPRPMTSLSEAAKQA 349 (352)
T ss_dssp ------HHHHHHHHHHHHHHHTTSSSSSCSSCHHHHHHHT
T ss_pred ------HHHHHHHHHHHHHHHHcCCCCCCCcCHHHHHHHh
Confidence 9999999999999999999999998888777653
No 23
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=4.8e-47 Score=364.23 Aligned_cols=281 Identities=21% Similarity=0.264 Sum_probs=248.1
Q ss_pred CCCcEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCc
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPK 134 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~ 134 (400)
|+|+|+|+|++++|++..+++.|.+. ...+...+||++.|+|++|++||.++.++|.
T Consensus 1 M~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~------------------- 61 (299)
T 3ikh_A 1 MSLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAA------------------- 61 (299)
T ss_dssp -CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECC-------------------
T ss_pred CCceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEE-------------------
Confidence 45789999999999999988877652 3457789999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccc--hhhcCCccEEEEc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELD--LSLITKAKIFHYG 212 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~--~~~i~~~~~v~~~ 212 (400)
+|+|.+|+++++.|+++||++++++ .++.+|+.+++.++++|+|+++++ .+++..+++++++ .+.+++++++|++
T Consensus 62 vG~D~~g~~i~~~l~~~gv~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~--~~a~~~l~~~~~~~~~~~~~~~~~v~~~ 138 (299)
T 3ikh_A 62 TGNDSNGAWIRQQIKNEPLMLLPDG-HFNQHSDTSIILNSADGDNAIITT--TAAADTFSLDEMIPHMADAVAGDILLQQ 138 (299)
T ss_dssp CCSSHHHHHHHHHGGGSSCEEESSS-CCSSCCEEEEEECSSSCSCEEEEE--CHHHHHCCHHHHGGGGTTCCTTCEEEEC
T ss_pred ECCCHHHHHHHHHHHHcCCceeeeE-ecCCCCcEEEEEEcCCCCeEEEEe--CCccccCCHHHHHHHHhhhccCCEEEEC
Confidence 9999999999999999999999985 566799999999999999998876 4566667777665 2567899999987
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHH
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV 292 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~ 292 (400)
+. .+.+...++++.++++|+++++||+.+. +.+.++++++|++++|++|++.|++
T Consensus 139 g~-----~~~~~~~~~~~~a~~~g~~v~~D~~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g---------- 193 (299)
T 3ikh_A 139 GN-----FSLDKTRALFQYARSRGMTTVFNPSPVN----------PDFCHLWPLIDIAVVNESEAELLQP---------- 193 (299)
T ss_dssp SC-----SCHHHHHHHHHHHHHTTCEEEECCCSCC----------GGGGGCGGGCSEEEEEHHHHHHHCC----------
T ss_pred CC-----CCHHHHHHHHHHHHHcCCEEEEccccch----------hhHHHHHhhCCEEEecHHHHHHHhc----------
Confidence 63 2356788899999999999999997542 3456688999999999999999887
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHH-HHHHHHHcCCccccchHHHHH-HHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVA-GILSQLSTDFSLLQKEDQLRD-ALRFANA 370 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~A-gfl~~l~~g~~~~~~~~~l~~-al~~A~a 370 (400)
.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.| ||+++|++|++ +++ |+++|++
T Consensus 194 -----~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~-------~~~~a~~~a~~ 261 (299)
T 3ikh_A 194 -----YGVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLRGVA-------PDALALAHASR 261 (299)
T ss_dssp -----CSCSEEEEECGGGCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTTSS-------SCHHHHHHHHH
T ss_pred -----CCCCEEEEEECCCceEEEeCCceEEeCCCCCccCCCCCchHHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 688999999999999999988899999999999999999999999 99999999999 999 9999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 371 CGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 371 ~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+++|++.|+.+++|+++++++++++.
T Consensus 262 ~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 289 (299)
T 3ikh_A 262 AAAITVSRRGTLSAFPGSRELAALLTTD 289 (299)
T ss_dssp HHHHHHHSSSSTTTSCCHHHHHHHHC--
T ss_pred HHHHHhCCCcccccCCCHHHHHHHHHhc
Confidence 9999999999998899999999998763
No 24
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=8.2e-47 Score=362.97 Aligned_cols=289 Identities=26% Similarity=0.379 Sum_probs=249.3
Q ss_pred CcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
++|+++|++++|++..+++.|.. ....+...+||++.|+|++|+|||.++.++|. +|
T Consensus 6 ~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~-------------------vG 66 (302)
T 2c4e_A 6 EKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSC-------------------VG 66 (302)
T ss_dssp EEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------EC
T ss_pred CcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEE-------------------Ee
Confidence 47999999999999988776553 23457789999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISL 216 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~ 216 (400)
+|.+|+++++.|+++||+++++...++.+|+.+++.++++|++++++++ ++...+++++++. ++++++|+++..
T Consensus 67 ~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~---~~~~~v~~~~~~- 140 (302)
T 2c4e_A 67 YDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLW--GAAKHYKELNPPN---FNTEIVHIATGD- 140 (302)
T ss_dssp TTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEEC--GGGGGGGGCCCCC---CCEEEEEECSSC-
T ss_pred CCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeC--ChhhhCCHhhcCc---ccCCEEEEeCCC-
Confidence 9999999999999999999999887787899999999989999988773 3555566666543 689999987531
Q ss_pred cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHH
Q 015777 217 ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 217 ~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
++...++++.++++| ++++||+.+...|. .+.+.++++++|++++|++|++.|++....+.. +++
T Consensus 141 -----~~~~~~~~~~a~~~g-~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l~ 205 (302)
T 2c4e_A 141 -----PEFNLKCAKKAYGNN-LVSFDPGQDLPQYS-----KEMLLEIIEHTNFLFMNKHEFERASNLLNFEID----DYL 205 (302)
T ss_dssp -----HHHHHHHHHHHBTTB-EEEECCGGGGGGCC-----HHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHH----HHH
T ss_pred -----cHHHHHHHHHHHhcC-CEEEeCchhhhhhh-----HHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHH----HHH
Confidence 267788899999999 99999986543332 345667889999999999999999886554332 566
Q ss_pred hCCCcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 297 HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 297 ~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
++ ++.|+||+|++|++++.+++.+++|+++++ ++|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 206 ~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~a~~~aa~~ 277 (302)
T 2c4e_A 206 ER-VDALIVTKGSKGSVIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYD-------LEKCGLIGAATASFV 277 (302)
T ss_dssp TT-CSEEEEECGGGCEEEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred hc-CCEEEEEECCCceEEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 77 999999999999999988888899999998 999999999999999999999999 999999999999999
Q ss_pred hcccCCCCCCCCHHHHHHHHhC
Q 015777 376 VMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 376 v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++.|+.+.+|+++++++++++
T Consensus 278 ~~~~G~~~~~p~~~ev~~~~~~ 299 (302)
T 2c4e_A 278 VEAKGCQTNLPTWDKVVERLEK 299 (302)
T ss_dssp TTSSSSSTTCCCHHHHHHHHHH
T ss_pred HccccccccCCCHHHHHHHHHh
Confidence 9999998889999999998865
No 25
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=3.2e-46 Score=363.54 Aligned_cols=295 Identities=25% Similarity=0.349 Sum_probs=251.6
Q ss_pred CCCCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCC
Q 015777 57 TRESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPC 132 (400)
Q Consensus 57 ~~~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~ 132 (400)
|.++++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|+|||.++.++|.
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~----------------- 83 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCK----------------- 83 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEE-----------------
T ss_pred ccccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEE-----------------
Confidence 345578999999999999988877654 23457788999999999999999999999999
Q ss_pred CcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hhcCCccEEE
Q 015777 133 PKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SLITKAKIFH 210 (400)
Q Consensus 133 ~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~i~~~~~v~ 210 (400)
+|+|.+|+++++.|+++||+++++...++.+|+.+++.++++|+|++++++ +++..+++++++. +.++.+++++
T Consensus 84 --vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~--ga~~~l~~~~~~~~~~~l~~~~~v~ 159 (331)
T 2fv7_A 84 --VGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVA--GANLLLNTEDLRAAANVISRAKVMV 159 (331)
T ss_dssp --EESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEEC--GGGGGCCHHHHHHTHHHHHHCSEEE
T ss_pred --ECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecC--CccccCCHHHHHHHHHhhccCCEEE
Confidence 999999999999999999999999887788999999999988999988873 4555677776643 3567899999
Q ss_pred EccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCc---
Q 015777 211 YGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPY--- 287 (400)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~--- 287 (400)
+++. .+.+.+.++++.+++.++++++||+++...| ..++++++|++++|++|++.|++....+
T Consensus 160 ~~~~-----~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~---------~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~ 225 (331)
T 2fv7_A 160 CQLE-----ITPATSLEALTMARRSGVKTLFNPAPAIADL---------DPQFYTLSDVFCCNESEAEILTGLTVGSAAD 225 (331)
T ss_dssp ECSS-----SCHHHHHHHHHHHHHTTCEEEECCCSCCTTC---------CTHHHHTCSEEEEEHHHHHHHHSSCCCSHHH
T ss_pred EecC-----CCHHHHHHHHHHHHHcCCEEEEeCCcccccc---------hHHHHhcCCEEEeCHHHHHHHhCCCCCChhH
Confidence 8642 2346778889999999999999998753222 2347889999999999999999875432
Q ss_pred HHHHHHHHHhCCCcEEEEEecCCcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHHHHHcC--CccccchHHHHH
Q 015777 288 DDAVVYKLFHANLKLLLVTEGPDGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD--FSLLQKEDQLRD 363 (400)
Q Consensus 288 ~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g--~~~~~~~~~l~~ 363 (400)
..+.++++++.|++.|+||+|++|++++.++ +.+++|+++++++|||||||+|.|+|+++|++| ++ +++
T Consensus 226 ~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~-------~~~ 298 (331)
T 2fv7_A 226 AGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLS-------LED 298 (331)
T ss_dssp HHHHHHHHHTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSC-------HHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCC-------HHH
Confidence 2456678888999999999999999999887 788999999999999999999999999999999 99 999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 015777 364 ALRFANACGALTVMERGAIPALPTREAVLN 393 (400)
Q Consensus 364 al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~ 393 (400)
|+++|+++|++++++.|+.+.+|+++++++
T Consensus 299 a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~ 328 (331)
T 2fv7_A 299 MLNRSNFIAAVSVQAAGTQSSYPYKKDLPL 328 (331)
T ss_dssp HHHHHHHHHHHHHTSSSGGGGCCCGGGSCG
T ss_pred HHHHHHHHHHHHhCCCCCccCCCCHHHHhh
Confidence 999999999999999999888899988754
No 26
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.8e-45 Score=356.09 Aligned_cols=297 Identities=20% Similarity=0.163 Sum_probs=247.2
Q ss_pred CCcEEEEccceeecccCcCCCCccCC---CCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~~---~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
|++|+|+|++++|++..+++.+.+.. ..+...+||++.|+|++|+|||.++.++|. +|
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG 63 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAP-------------------RG 63 (317)
T ss_dssp CCEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECE-------------------EE
T ss_pred CCeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEe-------------------ec
Confidence 35899999999999988776554321 136788999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch----hhcCCccEEEEc
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL----SLITKAKIFHYG 212 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~----~~i~~~~~v~~~ 212 (400)
+|.+|+++++.|+++||++++ ...++.+|+.++++++++|++++.+++. .....++++.++. +.+..++++|++
T Consensus 64 ~D~~G~~l~~~L~~~gV~~~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 141 (317)
T 2nwh_A 64 GDVTGEVVAEAARQAGVEDTP-FTFLDRRTPSYTAILERDGNLVIALADM-DLYKLFTPRRLKVRAVREAIIASDFLLCD 141 (317)
T ss_dssp SSHHHHHHHHHHHHTTCEECC-EEETTSCCCEEEEEECTTSCEEEEEEEC-GGGGGCCHHHHTSHHHHHHHHHCSEEEEE
T ss_pred CCchHHHHHHHHHHcCCCCCC-cccCCCCCceEEEEEcCCCCEEEEEcch-HHHhhCCHHHhhhhhhhhHhccCCEEEEe
Confidence 999999999999999999998 5566779999999999999998876542 3334466655542 457789999986
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHH
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV 292 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~ 292 (400)
+. .+.+.+.++++.+++.|+++++||+. . ...+.+.++++++|++++|++|++.|++.+..+..+.+
T Consensus 142 ~~-----~~~~~~~~~~~~a~~~g~~v~~Dp~~-------~-~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 208 (317)
T 2nwh_A 142 AN-----LPEDTLTALGLIARACEKPLAAIAIS-------P-AKAVKLKAALGDIDILFMNEAEARALTGETAENVRDWP 208 (317)
T ss_dssp TT-----SCHHHHHHHHHHHHHTTCCEEEECCS-------H-HHHGGGTTTGGGCSEEEEEHHHHHHHHC-----CTTHH
T ss_pred CC-----CCHHHHHHHHHHHHhcCCeEEEeCCC-------H-HHHHHHHHHhhhCeEecCCHHHHHHHhCCChhHHHHHH
Confidence 42 23567888999999999999999963 1 12355677889999999999999999987323334567
Q ss_pred HHHHhCCCcEEEEEecCCcEEEEeCC-ceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 293 YKLFHANLKLLLVTEGPDGCRYYTKD-FSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 293 ~~l~~~g~~~vvvT~G~~G~~~~~~~-~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+.+++.|++.|+||+|++|+++++++ ..+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+++
T Consensus 209 ~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~~ 281 (317)
T 2nwh_A 209 NILRKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKT-------IREALRQGAAA 281 (317)
T ss_dssp HHHHHTTCCCEEEEETTTEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCC-------HHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCC-------HHHHHHHHHHH
Confidence 78888999999999999999998866 46889999999999999999999999999999999 99999999999
Q ss_pred HHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 372 GALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 372 Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
|++++++.|+.+.+|++++++++...
T Consensus 282 aa~~v~~~G~~~~~~~~~~v~~~~~~ 307 (317)
T 2nwh_A 282 AAITVQSSFATSQDLSKDSVEAMLGL 307 (317)
T ss_dssp HHHHHSSTTCCGGGCCHHHHHHHHTT
T ss_pred HHHHHcCCCCCCCCCCHHHHHhHhhh
Confidence 99999999998888999999986443
No 27
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=5.1e-46 Score=367.60 Aligned_cols=296 Identities=18% Similarity=0.230 Sum_probs=253.0
Q ss_pred CCcEEEEccceeecccCcCC--------------------CCcc----CCCCceecCCChHHHHHHHHHHc---CCCcee
Q 015777 60 SPLVVCFGEMLIDFVPTVSG--------------------LSLA----ESPAFKKAPGGAPANVAVGIARL---GGSSAF 112 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~N~A~~larL---G~~~~~ 112 (400)
+.+|+++|++++|++..++. .|.. ........+||++.|+|+++++| |.++.+
T Consensus 24 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ 103 (370)
T 3vas_A 24 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 103 (370)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEE
T ss_pred CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEE
Confidence 36799999999999999884 3322 34577889999999999999999 999999
Q ss_pred eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCcccc
Q 015777 113 IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 192 (400)
Q Consensus 113 i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~ 192 (400)
+|. ||+|.+|+++++.|++.||+++++...++.+|+.++++++ +|+|+++.+ .+++..
T Consensus 104 ig~-------------------vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~--~ga~~~ 161 (370)
T 3vas_A 104 VGC-------------------IGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACD 161 (370)
T ss_dssp EEE-------------------ECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGG
T ss_pred EEE-------------------EcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe-CCceeEEEc--cchhhh
Confidence 999 9999999999999999999999987756779999999998 899999876 456667
Q ss_pred CCccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCc
Q 015777 193 LQEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETAD 268 (400)
Q Consensus 193 l~~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~d 268 (400)
+++++++. +.+++++++|++++... .+.+.+.++++.++++|+++++|+.. +.| .+..++.+.++++++|
T Consensus 162 l~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~ld~~~--~~~--~~~~~~~l~~ll~~~d 235 (370)
T 3vas_A 162 LSLAHIEQPHVWSLVEKAQVYYIAGFVIN--TCYEGMLKIAKHSLENEKLFCFNLSA--PFL--SQFNTKEVDEMISYSN 235 (370)
T ss_dssp CCHHHHTSHHHHHHHHHCSEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCC--HHH--HHHCHHHHHHHHTTCS
T ss_pred CCHHHcCchhhHHHHhhCCEEEEEeeecc--CCHHHHHHHHHHHHHcCCEEEEECCc--HHH--HHHHHHHHHHHHhhCC
Confidence 88777764 56889999999987543 44678889999999999999999852 111 1233566778899999
Q ss_pred EEEcCHhHHhcccCCCC---CcHHHHHHHHHhC-------CCcEEEEEecCCcEEEEe--CCceEEEccccc---cccCC
Q 015777 269 IIKISEEEISFLTQGED---PYDDAVVYKLFHA-------NLKLLLVTEGPDGCRYYT--KDFSGRVQGLKV---EAVDA 333 (400)
Q Consensus 269 vl~~N~~E~~~l~~~~~---~~~~~~~~~l~~~-------g~~~vvvT~G~~G~~~~~--~~~~~~vpa~~v---~vvDt 333 (400)
++++|++|++.|++... .+.+++++++.++ +++.||||+|++|++++. +++.+++|++++ ++|||
T Consensus 236 il~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDt 315 (370)
T 3vas_A 236 IVFGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDT 315 (370)
T ss_dssp EEEEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCC
T ss_pred EEEcCHHHHHHHhcccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCC
Confidence 99999999999987643 3345677788875 999999999999999999 788899999987 89999
Q ss_pred CCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 015777 334 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVL 392 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~ 392 (400)
|||||+|+|||+++|++|++ +++|+++|+++|+++|++.|+. +|+++++.
T Consensus 316 tGAGDaF~ag~l~~l~~g~~-------l~~a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 316 NGAGDAFAAGFIADYIRGKP-------MITSLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp TTHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred CChHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 99999999999999999999 9999999999999999999984 58887764
No 28
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=3.3e-45 Score=353.47 Aligned_cols=291 Identities=22% Similarity=0.309 Sum_probs=250.3
Q ss_pred CCCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCC-ceeeecccccccccceeeeccCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGS-SAFIGKTTLFCFYEHVKVIILPCP 133 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~-~~~i~~~~~~~~~~~~~~~~~~~~ 133 (400)
|-++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|+|||.+ +.++|.
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~------------------ 74 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTC------------------ 74 (311)
T ss_dssp CCCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEE------------------
T ss_pred ccCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEE------------------
Confidence 5578999999999999998887654 24567788999999999999999999 999999
Q ss_pred cCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcc
Q 015777 134 KVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGS 213 (400)
Q Consensus 134 ~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~ 213 (400)
+|+|.+|+++++.|+++|| ++.+.++.+|+.+++.++++|++++++++ ++...+++++++.+.+++++++++++
T Consensus 75 -vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~l~~~~~~~~~~~~~~~v~~~~ 148 (311)
T 1vm7_A 75 -IGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFP--GANAELKKELIDWNTLSESDILLLQN 148 (311)
T ss_dssp -ECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEEC--GGGGGCCGGGCCHHHHTTCSEEEECS
T ss_pred -ECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEec--CccccCCHHHhChhhcccCCEEEEeC
Confidence 9999999999999999999 67776777999999999988999998874 56666787777667788999999875
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCC---CCcHHH
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDA 290 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~---~~~~~~ 290 (400)
.. +.+.+. +.+++.++++++||+++. +.+.++++++|++++|++|++.|++.. ..+..+
T Consensus 149 ~~-----~~~~~~---~~a~~~~~~v~~Dp~~~~----------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 210 (311)
T 1vm7_A 149 EI-----PFETTL---ECAKRFNGIVIFDPAPAQ----------GINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEK 210 (311)
T ss_dssp SS-----CHHHHH---HHHHHCCSEEEECCCSCT----------TCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHH
T ss_pred CC-----CHHHHH---HHHHHcCCEEEEeCcchh----------hhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHH
Confidence 32 223333 337888999999998632 233457889999999999999998752 133456
Q ss_pred HHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHH
Q 015777 291 VVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANA 370 (400)
Q Consensus 291 ~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a 370 (400)
.++++.++|++.|+||+|++|++++.+++.+++|+++++++|||||||+|.|+|+++|++|++ +++|+++|++
T Consensus 211 ~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~~ 283 (311)
T 1vm7_A 211 AAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKN-------PEEAVIFGTA 283 (311)
T ss_dssp HHHHHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEECCCCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCC-------HHHHHHHHHH
Confidence 778888999999999999999999988888899999999999999999999999999999999 9999999999
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 371 CGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 371 ~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+.++++.|+.+.+|++++++++++++
T Consensus 284 ~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 311 (311)
T 1vm7_A 284 AAAISVTRLGAQSSIPAREEVEAFLKNL 311 (311)
T ss_dssp HHHHHTTSSSSGGGCCCHHHHHHHHHTC
T ss_pred HHHHHhCcCCccccCCCHHHHHHHHhcC
Confidence 9999999999987899999999998764
No 29
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=5.5e-45 Score=348.88 Aligned_cols=287 Identities=25% Similarity=0.346 Sum_probs=236.0
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
|+++|+|+|++++|+++. ...+||++.|+|++++|||.++.++|. +|+|
T Consensus 2 m~~~v~viG~~~~D~~p~------------~~~~GG~~~N~A~~la~LG~~~~~~~~-------------------vG~D 50 (296)
T 2qhp_A 2 MNNIIVGMGEALWDVLPE------------GKKIGGAPANFAYHVSQFGFDSRVVSA-------------------VGND 50 (296)
T ss_dssp -CCEEEEESCCEEEEETT------------EEEEECHHHHHHHHHHHTTCEEEEEEE-------------------EESS
T ss_pred CcceEEEEchhheEecCC------------CCCCCCHHHHHHHHHHHcCCCeeEEEE-------------------eCCC
Confidence 446899999999999842 368999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccC
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLIT 218 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~ 218 (400)
.+|+++++.|+++|| +++.+.++.+|+++++.++++|+|++.++++ .....+..++...+.++++|++|++++....
T Consensus 51 ~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~ 127 (296)
T 2qhp_A 51 ELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEG-VAWDNIPFTDELKRLALNTRAVCFGSLAQRN 127 (296)
T ss_dssp HHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSS-CGGGCCCCCHHHHHHHHTEEEEEECSGGGSS
T ss_pred hHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecC-ChhhhCCcchhhHhhhcCCCEEEECChHhcC
Confidence 999999999999999 7787777789999999888889988877643 2223343332233567899999999876666
Q ss_pred chhHHHHHHHHHHHhh-CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCC---CCcHHHHHHH
Q 015777 219 EPCKSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE---DPYDDAVVYK 294 (400)
Q Consensus 219 ~~~~~~~~~~~~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~---~~~~~~~~~~ 294 (400)
+.+.+.+.++++.+++ +++++++||+.+...|. .+.+.++++++|++++|++|++.|++.. ..+.++++++
T Consensus 128 ~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~ 202 (296)
T 2qhp_A 128 EVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT-----KEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWI 202 (296)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEECcCCccccC-----HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHH
Confidence 6667788888988887 69999999998877663 2455667889999999999999998743 2344567778
Q ss_pred HHhC-CCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHH
Q 015777 295 LFHA-NLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGA 373 (400)
Q Consensus 295 l~~~-g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa 373 (400)
++++ |++.|+||+|++|++++++++.+++|+++++++|||||||+|.|+|+++|++|++ +++|+++|+++|+
T Consensus 203 l~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~-------~~~a~~~a~~~aa 275 (296)
T 2qhp_A 203 LLAKYNLKMLILTCGINGSYVFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKS-------VPEAHKLAVEVSA 275 (296)
T ss_dssp HHHHTTCSEEEEECGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHH
Confidence 8775 9999999999999999998888999999999999999999999999999999999 9999999999999
Q ss_pred HHhcccCCCCCCCCHHHHHH
Q 015777 374 LTVMERGAIPALPTREAVLN 393 (400)
Q Consensus 374 ~~v~~~G~~~~~p~~~~l~~ 393 (400)
.++++.|+.+.+| +++.+
T Consensus 276 ~~v~~~G~~~~~~--~~l~~ 293 (296)
T 2qhp_A 276 YVCTQSGAMPELP--VILKD 293 (296)
T ss_dssp HHHTSSSSSCCCC--HHHHG
T ss_pred HHHcCCCCCCCCc--HHHHh
Confidence 9999999987654 44443
No 30
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=7.9e-44 Score=349.22 Aligned_cols=309 Identities=22% Similarity=0.302 Sum_probs=255.8
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
.-|+|++||+.+.++... ...+......+...+||++.|+|++|++||.++.++|. +|+|
T Consensus 11 ~~~~~~~~ge~l~~~~~~-~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~D 70 (351)
T 2afb_A 11 HHMKVVTFGEIMLRLSPP-DHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTK-------------------LPNN 70 (351)
T ss_dssp CCCEEEEESCCEEEEECS-TTCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEE-------------------ECSS
T ss_pred ccceEEEechhhheecCC-CCccccccceeeEecCChHHHHHHHHHHcCCCeEEEEE-------------------eCCC
Confidence 457999999999997653 22233345678889999999999999999999999999 9999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEE-EecCCCccccCCccccch-hhcCCccEEEEccccc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFM-FYRNPSADMLLQEAELDL-SLITKAKIFHYGSISL 216 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~-~~~~~~~~~~l~~~~l~~-~~i~~~~~v~~~~~~~ 216 (400)
.+|+++++.|+++||+++++.. .+.+|+++++..+.++++.++ +.+...+...++++++.. ..+++++++|++++..
T Consensus 71 ~~G~~i~~~L~~~gv~~~~v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~ 149 (351)
T 2afb_A 71 PLGDAAAGHLRKFGVKTDYIAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITP 149 (351)
T ss_dssp HHHHHHHHHHHHTTCBCTTEEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSG
T ss_pred HHHHHHHHHHHHcCCcceeEEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCccc
Confidence 9999999999999999999986 567999999877654444443 344334445566666654 3568999999987754
Q ss_pred -cCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC---------
Q 015777 217 -ITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP--------- 286 (400)
Q Consensus 217 -~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~--------- 286 (400)
..+...+.+.++++.+++.|+++++||+.+..+|. .+..++.+.++++++|++++|++|++.|++....
T Consensus 150 ~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~-~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 228 (351)
T 2afb_A 150 PLGKELPLILEDALKVANEKGVTVSCDLNYRARLWT-KEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKL 228 (351)
T ss_dssp GGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCC-HHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------
T ss_pred ccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCC-hHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCccccccccccc
Confidence 34445678889999999999999999999888885 3445677788999999999999999999987643
Q ss_pred c---HHHHHHHHHhC-CCcEEEEEecCCcE--------EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcc
Q 015777 287 Y---DDAVVYKLFHA-NLKLLLVTEGPDGC--------RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSL 354 (400)
Q Consensus 287 ~---~~~~~~~l~~~-g~~~vvvT~G~~G~--------~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~ 354 (400)
+ ..++++++++. |++.|+||+|++|+ +++.+++.+++|+++++++|||||||+|+|||+++|++|++
T Consensus 229 ~~~~~~~~~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~- 307 (351)
T 2afb_A 229 NREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFD- 307 (351)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCC-
T ss_pred chhhHHHHHHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCC-
Confidence 2 23456677774 99999999999975 77777778899999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|+++|+++|++++++.|+.+ +|+++++++++++
T Consensus 308 ------l~~a~~~A~~~aa~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 308 ------SQKKAEFAAAASCLKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp ------HHHHHHHHHHHHHHHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred ------HHHHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhc
Confidence 99999999999999999999875 8999999998865
No 31
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=6.9e-45 Score=354.62 Aligned_cols=292 Identities=23% Similarity=0.263 Sum_probs=246.7
Q ss_pred CCcEEEEccceeecccCc----------CCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccce
Q 015777 60 SPLVVCFGEMLIDFVPTV----------SGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHV 125 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~----------~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~ 125 (400)
.|+|+|+|++++|++..+ ++.|.. ....+...+||++.|+|+++++||.++.++|.
T Consensus 10 ~m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~---------- 79 (334)
T 2pkf_A 10 HMTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGA---------- 79 (334)
T ss_dssp SSEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECE----------
T ss_pred CCeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEE----------
Confidence 368999999999999876 444433 23457789999999999999999999999999
Q ss_pred eeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchh--hc
Q 015777 126 KVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLS--LI 203 (400)
Q Consensus 126 ~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~--~i 203 (400)
+|+| +|+ +++.|++.||+++++.+.++.+|+.+++.++++|++.+.+++ ++...++.+++... .+
T Consensus 80 ---------vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~--ga~~~~~~~~~~~~~~~l 146 (334)
T 2pkf_A 80 ---------AGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYP--GAMSEARNIKLADVVSAI 146 (334)
T ss_dssp ---------ECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEEC--GGGGGGGGCCHHHHHHHH
T ss_pred ---------EeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECC--chhhhCCHhhcChhhhhh
Confidence 9999 899 999999999999999888788999999999988999887763 34555555555432 35
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCC
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQG 283 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~ 283 (400)
++++++|+++.. ++...++++.+++.|+++++||+++..+|. .+.+.++++++|++++|++|++.|++.
T Consensus 147 ~~~~~v~~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~l~~~l~~~dil~~N~~E~~~l~g~ 215 (334)
T 2pkf_A 147 GKPELVIIGAND------PEAMFLHTEECRKLGLAFAADPSQQLARLS-----GEEIRRLVNGAAYLFTNDYEWDLLLSK 215 (334)
T ss_dssp CSCSEEEEESCC------HHHHHHHHHHHHHHTCCEEEECGGGGGTSC-----HHHHHTTTTTCSEEEEEHHHHHHHHHH
T ss_pred cCCCEEEEcCCC------hHHHHHHHHHHHhcCCeEEEeccchhhhhh-----HHHHHHHHhcCCEEecCHHHHHHHhcc
Confidence 889999987642 456778888899999999999988766663 234567889999999999999999876
Q ss_pred CCCcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCc-eEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHH
Q 015777 284 EDPYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDF-SGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQL 361 (400)
Q Consensus 284 ~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~-~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l 361 (400)
...+.+ .+.+. ++.|+||+|++|++++.+++ .+++|+++++ ++|||||||+|.|||+++|++|++ +
T Consensus 216 ~~~~~~----~l~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~-------~ 283 (334)
T 2pkf_A 216 TGWSEA----DVMAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLG-------L 283 (334)
T ss_dssp HCCCHH----HHHTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------H
T ss_pred CCCCHH----HHHhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCC-------H
Confidence 443332 24443 89999999999999998887 8899999987 789999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 362 RDALRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 362 ~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
++|+++|+++|++++++.|+.+.+|+++++++++++
T Consensus 284 ~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~ 319 (334)
T 2pkf_A 284 ERSAQLGSLVAVLVLESTGTQEWQWDYEAAASRLAG 319 (334)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcCCCCHHHHHHHHHH
Confidence 999999999999999999999889999999998764
No 32
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=5.9e-45 Score=353.97 Aligned_cols=289 Identities=24% Similarity=0.358 Sum_probs=243.1
Q ss_pred CcEEEEccceeecccCc----------CCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeeccccccccccee
Q 015777 61 PLVVCFGEMLIDFVPTV----------SGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVK 126 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~----------~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~ 126 (400)
|+|+|+|++++|++..+ ++.|.. ....+...+||++.|+|++|+|||.++.++|.
T Consensus 1 m~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~----------- 69 (326)
T 3b1n_A 1 MATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGT----------- 69 (326)
T ss_dssp -CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEE-----------
T ss_pred CcEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEE-----------
Confidence 36999999999999887 544443 23567788999999999999999999999999
Q ss_pred eeccCCCcCCC-ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCC
Q 015777 127 VIILPCPKVGA-DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITK 205 (400)
Q Consensus 127 ~~~~~~~~vG~-D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~ 205 (400)
+|+ | +|+ +++.|+++||+++++.+.++.+|+.+++.++++|++.+.++ +++...+.++++... ++
T Consensus 70 --------vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~--~ga~~~~~~~~~~~~--~~ 135 (326)
T 3b1n_A 70 --------LGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFH--PGAMMQSHVNHAGEA--KD 135 (326)
T ss_dssp --------EETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEE--CGGGGGGGGSCGGGC--CS
T ss_pred --------ECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEe--cChhhhcChhhcccc--cC
Confidence 999 9 899 99999999999999988888899999999998899887666 345545555555422 78
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCC
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGED 285 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~ 285 (400)
++++|+++.. ++.+.++++.+++.|+++++||+.+...|. .+.+.++++++|++++|++|++.|++...
T Consensus 136 ~~~v~~~~~~------~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~-----~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 204 (326)
T 3b1n_A 136 IKLAIVGPDG------FQGMVQHTEELAQAGVPFIFDPGQGLPLFD-----GATLRRSIELATYIAVNDYEAKLVCDKTG 204 (326)
T ss_dssp CSEEEECSCC------HHHHHHHHHHHHHHTCCEEECCGGGGGGCC-----HHHHHHHHHHCSEEEEEHHHHHHHHHHHC
T ss_pred CCEEEECCcc------HHHHHHHHHHHHHCCCEEEEeCchhhhhcc-----HHHHHHHHHhCCEEecCHHHHHHHhCCCC
Confidence 9999987542 457778889999999999999987665553 23456788899999999999999987644
Q ss_pred CcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEcccccc-ccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 286 PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVE-AVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 286 ~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~-vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
.+.++ +.+ +++.|+||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|++ +++|
T Consensus 205 ~~~~~----l~~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~-------~~~a 272 (326)
T 3b1n_A 205 WSEDE----IAS-RVQALIITRGEHGATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFD-------WATA 272 (326)
T ss_dssp CCHHH----HHT-TSSEEEEECGGGCEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHH
T ss_pred CCHHH----HHh-cCCEEEEecCCCceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCC-------HHHH
Confidence 33322 333 3899999999999999998888899999986 789999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+++|+++|++++++.|+...+|+++++++++++
T Consensus 273 ~~~A~~~aa~~v~~~G~~~~~~~~~ev~~~l~~ 305 (326)
T 3b1n_A 273 GRLASLMGALKIAHQGPQTYAPTRAEIDARFET 305 (326)
T ss_dssp HHHHHHHHHHHHTSSSTTCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999998888999999998864
No 33
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=1.5e-44 Score=353.89 Aligned_cols=292 Identities=18% Similarity=0.239 Sum_probs=244.2
Q ss_pred CCCcEEEEccceeecccCcCC--------------------CCcc----CCCCceecCCChHHHHHHHHHHc----CCC-
Q 015777 59 ESPLVVCFGEMLIDFVPTVSG--------------------LSLA----ESPAFKKAPGGAPANVAVGIARL----GGS- 109 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~--------------------~~~~----~~~~~~~~~GG~~~N~A~~larL----G~~- 109 (400)
+.++|+++|++++|++..++. .|.. +...+...+||++.|+|+++++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 456899999999999998874 2221 34567899999999999999999 999
Q ss_pred ceeeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCc
Q 015777 110 SAFIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSA 189 (400)
Q Consensus 110 ~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~ 189 (400)
+.++|. ||+|.+|+++++.|+++||++++++ .++.+|+.+++.++ +|+|+++.+ .++
T Consensus 86 ~~~ig~-------------------vG~D~~g~~~~~~l~~~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~--~ga 142 (347)
T 3otx_A 86 VTYVGC-------------------IADDRYGKVLKEAAEHEGIVMAVEH-TTKAGSGACAVCIT-GKERTLVAD--LGA 142 (347)
T ss_dssp EEEECE-------------------ECSSHHHHHHHHHHHHHTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEE--EEG
T ss_pred EEEEEE-------------------ecCChHHHHHHHHHHHCCCceeccc-CCCCCCeEEEEEEE-CCceeeeec--hhh
Confidence 999999 9999999999999999999999985 56679999999998 899988776 456
Q ss_pred cccCCccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc
Q 015777 190 DMLLQEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE 265 (400)
Q Consensus 190 ~~~l~~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~ 265 (400)
...+++++++. +.+++++++|++++... .+.+.+.++++.++++|+++++|+... .| .+.+++.+.++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~ 216 (347)
T 3otx_A 143 ANHLSSEHMRSPAVVRAMDESRIFYFSGFTLT--VDVNHVLQACRKAREVDGLFMINLSAP--FI--MQFFSAQLGEVLP 216 (347)
T ss_dssp GGGCCHHHHTSHHHHHHHHHCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCCH--HH--HHHCHHHHHHHGG
T ss_pred hhcCCHHHcCchhhHHHHhhCCEEEEeeeecc--cCHHHHHHHHHHHHHhCCEEEeeCchh--hh--HHHHHHHHHHHHh
Confidence 66677777753 57889999999987543 346788899999999999999998521 11 1233567788999
Q ss_pred cCcEEEcCHhHHhcccCCC---CCcHHHHHHHHH------hCCCcEEEEEecCCcEEEEeCCceEEEccccc---cccCC
Q 015777 266 TADIIKISEEEISFLTQGE---DPYDDAVVYKLF------HANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDA 333 (400)
Q Consensus 266 ~~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~------~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v---~vvDt 333 (400)
++|++++|++|++.|++.. ..+.+++++.+. +.+++.|+||+|++|++++++++.+++|++++ ++|||
T Consensus 217 ~~dil~~N~~Ea~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDt 296 (347)
T 3otx_A 217 YTDIIVANRHEAKEFANMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDM 296 (347)
T ss_dssp GCSEEEEEHHHHHHHHHHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSS
T ss_pred hCCEEecCHHHHHHHhcccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCC
Confidence 9999999999999998652 234566777777 47999999999999999999998889998877 89999
Q ss_pred CCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCH
Q 015777 334 TGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 388 (400)
Q Consensus 334 tGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~ 388 (400)
|||||+|+|||+++|++|++ +++|+++|+++|+++|++.|+ .+|++
T Consensus 297 tGAGDaF~ag~l~~l~~g~~-------l~~a~~~a~~~aa~~v~~~G~--~~p~~ 342 (347)
T 3otx_A 297 NGAGDAFMGGFLSAYAVGKD-------LRRCCETGHYTAQEVIQRDGC--SFPEK 342 (347)
T ss_dssp CCSHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHTCC------CCS
T ss_pred CChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcccCC--CCCCC
Confidence 99999999999999999999 999999999999999999996 44654
No 34
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=3.2e-43 Score=340.48 Aligned_cols=290 Identities=20% Similarity=0.187 Sum_probs=242.8
Q ss_pred CCcEEEEccceeec-ccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 60 SPLVVCFGEMLIDF-VPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 60 ~~~v~viG~~~vD~-~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
.|-+.|.+++++|+ +..++++... ....+...+||++.|+|++|++||.++.++|. +
T Consensus 2 ~mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------v 62 (320)
T 3ie7_A 2 SLIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGI-------------------A 62 (320)
T ss_dssp CCEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEE-------------------E
T ss_pred ceEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEE-------------------e
Confidence 35677789999999 9988876321 34567889999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCC--eeEEEecCCCccccCCccccch------hhcCCcc
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGE--REFMFYRNPSADMLLQEAELDL------SLITKAK 207 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~--r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~ 207 (400)
|+| +|+++++.|+++||+++++...++ +|+.++++++ +|+ |+++..+ +. .+++++++. +.+++++
T Consensus 63 G~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~~--g~--~~~~~~~~~~~~~~~~~~~~~~ 135 (320)
T 3ie7_A 63 GSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLS-DDTNGSTMIPEA--GF--TVSQTNKDNLLKQIAKKVKKED 135 (320)
T ss_dssp EST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEE-TTCSCCEEEECC--CC--CCCHHHHHHHHHHHHHHCCTTC
T ss_pred cCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEE-CCCceeEEEeCC--CC--CCCHHHHHHHHHHHHHHhcCCC
Confidence 998 999999999999999999955555 8999999988 788 8776653 22 355555542 5688999
Q ss_pred EEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHhcccCCCCC
Q 015777 208 IFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDP 286 (400)
Q Consensus 208 ~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~~l~~~~~~ 286 (400)
++|++++.. .....+.+.++++.+++.|+++++||+. + .+.+.+. ++|++++|++|++.|+|....
T Consensus 136 ~v~~~g~~~-~~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~----~l~~~l~~~~dil~~N~~E~~~l~g~~~~ 202 (320)
T 3ie7_A 136 MVVIAGSPP-PHYTLSDFKELLRTVKATGAFLGCDNSG--------E----YLNLAVEMGVDFIKPNEDEVIAILDEKTN 202 (320)
T ss_dssp EEEEESCCC-TTCCHHHHHHHHHHHHHHTCEEEEECCH--------H----HHHHHHHHCCSEECCBTTGGGGGSCTTCC
T ss_pred EEEEeCCCC-CCCCHHHHHHHHHHHHhcCCEEEEECCh--------H----HHHHHHhcCCeEEeeCHHHHHHHhCCCcC
Confidence 999976532 2344678889999999999999999962 2 2334444 899999999999999998765
Q ss_pred cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHH
Q 015777 287 YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 366 (400)
Q Consensus 287 ~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~ 366 (400)
...+.+.++.+. ++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|++
T Consensus 203 ~~~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~-------~~~a~~ 274 (320)
T 3ie7_A 203 SLEENIRTLAEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMP-------ITETLK 274 (320)
T ss_dssp CHHHHHHHHTTT-CSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHH
T ss_pred CCHHHHHHHHhh-CCEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCC-------HHHHHH
Confidence 233444455555 999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 367 FANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 367 ~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+|+++|+++|++.|+ .+|++++++++++++
T Consensus 275 ~A~a~aa~~v~~~G~--~~~~~~ev~~~~~~~ 304 (320)
T 3ie7_A 275 VATGCSASKVMQQDS--SSFDLEAAGKLKNQV 304 (320)
T ss_dssp HHHHHHHHHHTSSSS--SCCCHHHHHHHGGGC
T ss_pred HHHHHHHHHHhCcCC--CCCCHHHHHHHhhCe
Confidence 999999999999994 679999999999875
No 35
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=3.6e-43 Score=341.92 Aligned_cols=290 Identities=17% Similarity=0.169 Sum_probs=237.1
Q ss_pred CCcEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+|.++|+|++++|++..++++... ....+...+||++.|+|++|+|||.++.++|. +|
T Consensus 20 ~Mi~~v~G~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG 80 (330)
T 2jg1_A 20 HMILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGF-------------------IG 80 (330)
T ss_dssp CCEEEEESSCEEEEEEEESCCCTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEE-------------------EE
T ss_pred cEEEEEecchhheEEEecCCccCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEE-------------------ec
Confidence 356778999999999988865211 23467889999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEEE
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIFH 210 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v~ 210 (400)
+ .+|+++++.|+++||+++++...++ |++++++++++ +++++.. +++ .+++++++. +.++++|++|
T Consensus 81 ~-~~G~~l~~~L~~~gV~~~~v~~~~~--t~~~~~~v~~~-~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~~v~ 152 (330)
T 2jg1_A 81 G-ELGQFIAKKLDHADIKHAFYNIKGE--TRNCIAILHEG-QQTEILE--QGP--EIDNQEAAGFIKHFEQMMEKVEAVA 152 (330)
T ss_dssp H-HHHHHHHHHHHHTTCEECCEEESSC--CEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHGGGCSEEE
T ss_pred c-hhHHHHHHHHHHCCCceeEEEccCC--CeeEEEEEeCC-CcEEEEC--CCC--CCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6 7999999999999999999887654 66667777665 6655443 333 255544431 3467899999
Q ss_pred EccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc---cCcEEEcCHhHHhcccCCCCC-
Q 015777 211 YGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE---TADIIKISEEEISFLTQGEDP- 286 (400)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~---~~dvl~~N~~E~~~l~~~~~~- 286 (400)
++++... ..+.+.+.++++.++++|+++++||+. . .+.++++ ++|++++|++|++.|++....
T Consensus 153 ~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~----~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~ 219 (330)
T 2jg1_A 153 ISGSLPK-GLNQDYYAQIIERCQNKGVPVILDCSG--------A----TLQTVLENPYKPTVIKPNISELYQLLNQPLDE 219 (330)
T ss_dssp EESCCCB-TSCTTHHHHHHHHHHTTTCCEEEECCH--------H----HHHHHHTSSSCCSEECCBHHHHHHHTTSCCCC
T ss_pred EECCCCC-CCCHHHHHHHHHHHHHCCCEEEEECCc--------H----HHHHHHhccCCceEEEeCHHHHHHHhCCCCCC
Confidence 8765332 234567788899999999999999962 2 2444555 899999999999999987533
Q ss_pred ---cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHH
Q 015777 287 ---YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRD 363 (400)
Q Consensus 287 ---~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~ 363 (400)
+..+.+++++++|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++
T Consensus 220 ~~~~~~~~~~~l~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~-------l~~ 292 (330)
T 2jg1_A 220 SLESLKQAVSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHEN-------DHD 292 (330)
T ss_dssp CHHHHHHHHHSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCC-------HHH
Confidence 2344567778889999999999999999998888899999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 364 ALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 364 al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
|+++|+++|++++++.|+. +|++++++++++++
T Consensus 293 al~~A~a~aa~~v~~~G~~--~~~~~ev~~~~~~i 325 (330)
T 2jg1_A 293 LLKKANTLGMLNAQEAQTG--YVNLNNYDDLFNQI 325 (330)
T ss_dssp HHHHHHHHHHHHHTSSSSS--CCCGGGHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCcCCC--CCCHHHHHHHHhce
Confidence 9999999999999999984 69999999998875
No 36
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-44 Score=356.17 Aligned_cols=287 Identities=19% Similarity=0.217 Sum_probs=239.3
Q ss_pred CcEEEEccceeecccCcCCC--------------------Ccc----CCCCceecCCChHHHHHHHHHHc---CCCceee
Q 015777 61 PLVVCFGEMLIDFVPTVSGL--------------------SLA----ESPAFKKAPGGAPANVAVGIARL---GGSSAFI 113 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~--------------------~~~----~~~~~~~~~GG~~~N~A~~larL---G~~~~~i 113 (400)
.+|+++|++++|++..++.. |.. +.......+||++.|+|+++++| |.++.++
T Consensus 24 ~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~i 103 (365)
T 3loo_A 24 GMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIFF 103 (365)
T ss_dssp TSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEEE
T ss_pred ccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEEE
Confidence 47999999999999998862 110 11246789999999999999987 9999999
Q ss_pred ecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccC
Q 015777 114 GKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLL 193 (400)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l 193 (400)
|. ||+|.+|+++++.|++.||+++++.. ++.+|+++++.++ +|+|+++.+ .++...+
T Consensus 104 g~-------------------vG~D~~g~~~~~~l~~~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~--~ga~~~~ 160 (365)
T 3loo_A 104 GC-------------------VGQDEYARILEERATSNGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCAN--LAAANDF 160 (365)
T ss_dssp EE-------------------EESBHHHHHHHHHHHHHTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEE--CGGGGGC
T ss_pred EE-------------------ecCCchHHHHHHHHHHCCCceecccc-CCCCCeEEEEEEE-CCceEEEec--cchHhhC
Confidence 99 99999999999999999999999887 6779999999998 788988876 5666678
Q ss_pred Cccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcE
Q 015777 194 QEAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADI 269 (400)
Q Consensus 194 ~~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dv 269 (400)
++++++. +.+++++++|++++.+. .+.+.+.++++.++++|+++++|+... .| .+..++.+.++++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~v~i~G~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~~--~~--~~~~~~~l~~~l~~~di 234 (365)
T 3loo_A 161 TPEHLRSDGNRAYLQGAQFFYVSGFFFT--VSFESALSVAKEAAATGRMFMMNLSAP--FV--PQFYKNNLEEIFPYVDV 234 (365)
T ss_dssp CGGGGGSHHHHHHHHHCSEEEEEGGGHH--HHHHHHHHHHHHHHHTTCEEEEECCST--HH--HHHCHHHHHHHGGGCSE
T ss_pred CHhHcCchhhHHHHhhCCEEEEeeeecc--CCHHHHHHHHHHHHHcCCEEEEECCch--hh--hHHHHHHHHHHHHhCCE
Confidence 8877763 56789999999987543 346788899999999999999998521 11 13345677888999999
Q ss_pred EEcCHhHHhcccCCC---CCcHHHHHHHHHhC------CCcEEEEEecCCcEEEE--eCCceEEEccccc---cccCCCC
Q 015777 270 IKISEEEISFLTQGE---DPYDDAVVYKLFHA------NLKLLLVTEGPDGCRYY--TKDFSGRVQGLKV---EAVDATG 335 (400)
Q Consensus 270 l~~N~~E~~~l~~~~---~~~~~~~~~~l~~~------g~~~vvvT~G~~G~~~~--~~~~~~~vpa~~v---~vvDttG 335 (400)
+++|++|++.|++.. ..+.+++++++.++ +++.||||+|++|++++ .+++.+++|++++ ++|||||
T Consensus 235 l~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttG 314 (365)
T 3loo_A 235 LFGNETEAIALAKEFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNG 314 (365)
T ss_dssp EEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTT
T ss_pred EecCHHHHHHHhcccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCC
Confidence 999999999998753 23456677788774 89999999999999999 7778889999988 8999999
Q ss_pred chHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCC
Q 015777 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIP 383 (400)
Q Consensus 336 AGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~ 383 (400)
|||+|+|||+++|++|++ +++|+++|+++|+++|++.|++.
T Consensus 315 AGDaF~agfl~~l~~g~~-------l~~a~~~a~~~Aa~~v~~~G~~~ 355 (365)
T 3loo_A 315 AGDAFVGGFLAQLLQSRT-------VDVCIKCGIWAAREIIQRSGCTF 355 (365)
T ss_dssp HHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHHGGGGG
T ss_pred hHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999 99999999999999999999853
No 37
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=1.7e-42 Score=333.74 Aligned_cols=291 Identities=22% Similarity=0.241 Sum_probs=239.8
Q ss_pred cEEEE-ccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCC
Q 015777 62 LVVCF-GEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 62 ~v~vi-G~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
+|+++ +++++|++..+++.... ....+...+||++.|+|+++++||.++.++|. +|+
T Consensus 3 ~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~ 63 (309)
T 3umo_A 3 RIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFP-------------------AGG 63 (309)
T ss_dssp CEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEE-------------------ECH
T ss_pred cEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEE-------------------ecC
Confidence 46666 67999999999887321 35678899999999999999999999999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch-----hhcCCccEEEEc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL-----SLITKAKIFHYG 212 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~-----~~i~~~~~v~~~ 212 (400)
| +|+++++.|+++||+++++...++.+++.++ ..+.+|+++++.+++ +. +++++++. +.+..++++|++
T Consensus 64 d-~g~~i~~~l~~~gv~~~~v~~~~~t~~~~~~-~~~~~g~~~~~~~~g--~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (309)
T 3umo_A 64 A-TGEHLVSLLADENVPVATVEAKDWTRQNLHV-HVEASGEQYRFVMPG--AA--LNEDEFRQLEEQVLEIESGAILVIS 137 (309)
T ss_dssp H-HHHHHHHHHHHTTCCEEEEECSSCCCCCEEE-EETTTCCEEEEECCC--CC--CCHHHHHHHHHHHTTSCTTCEEEEE
T ss_pred c-hHHHHHHHHHHcCCceEEEEecCCCeeEEEE-EECCCCcEEEEEcCC--CC--CCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 8 9999999999999999998776554444443 334478888777643 32 55555431 124578899988
Q ss_pred cccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc--CcEEEcCHhHHhcccCCCCC---c
Q 015777 213 SISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET--ADIIKISEEEISFLTQGEDP---Y 287 (400)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~--~dvl~~N~~E~~~l~~~~~~---~ 287 (400)
++. ....+.+.+.++++.++++|+++++||+ . +.+.+++++ +|++++|++|++.|+|.... +
T Consensus 138 g~~-~~~~~~~~~~~~~~~a~~~~~~v~~D~~--------~----~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~ 204 (309)
T 3umo_A 138 GSL-PPGVKLEKLTQLISAAQKQGIRCIVDSS--------G----EALSAALAIGNIELVKPNQKELSALVNRELTQPDD 204 (309)
T ss_dssp SCC-CTTCCHHHHHHHHHHHHHTTCEEEEECC--------H----HHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTH
T ss_pred ccC-CCCCCHHHHHHHHHHHHhcCCEEEEECC--------c----HHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHH
Confidence 753 2234567888999999999999999995 1 235566776 59999999999999997633 3
Q ss_pred HHHHHHHHHhCCC-cEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHH
Q 015777 288 DDAVVYKLFHANL-KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALR 366 (400)
Q Consensus 288 ~~~~~~~l~~~g~-~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~ 366 (400)
..+.++.+++++. +.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|++
T Consensus 205 ~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~-------~~~a~~ 277 (309)
T 3umo_A 205 VRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEMVR 277 (309)
T ss_dssp HHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCC-------HHHHHH
Confidence 3456778888887 89999999999999999889999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHhCCC
Q 015777 367 FANACGALTVMERGAIPALPTREAVLNAIHAPV 399 (400)
Q Consensus 367 ~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~~ 399 (400)
+|+++|+++|++.|+. +|+++||+++++++.
T Consensus 278 ~A~~~aa~~v~~~G~~--~~~~~ev~~~l~~~~ 308 (309)
T 3umo_A 278 FGVAAGSAATLNQGTR--LCSHDDTQKIYAYLS 308 (309)
T ss_dssp HHHHHHHHHTTSSTTC--CCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCC--CCCHHHHHHHHHHhc
Confidence 9999999999999985 699999999998763
No 38
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=2e-43 Score=349.30 Aligned_cols=298 Identities=18% Similarity=0.238 Sum_probs=239.5
Q ss_pred cEEEEccceeecccCcCCCCcc------------------------CCCCceecCCChHHHHHHHHHHcCCC---ceeee
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA------------------------ESPAFKKAPGGAPANVAVGIARLGGS---SAFIG 114 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~------------------------~~~~~~~~~GG~~~N~A~~larLG~~---~~~i~ 114 (400)
.|++||+.++|++..++...+. +.......+||++.|+|+++++||.+ +.|+|
T Consensus 28 ~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fiG 107 (372)
T 3uq6_A 28 YVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYVG 107 (372)
T ss_dssp CEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEEE
T ss_pred eEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEEe
Confidence 5999999999999888732110 23345678999999999999999975 88999
Q ss_pred cccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCC
Q 015777 115 KTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQ 194 (400)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~ 194 (400)
+ ||+|.+|+++++.|++.||+++++...++.+|+.++++++ +|+|++..+ .++...+.
T Consensus 108 ~-------------------VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~--~ga~~~l~ 165 (372)
T 3uq6_A 108 C-------------------IGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTY--LGAACDLS 165 (372)
T ss_dssp E-------------------ECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEE--EEGGGGCC
T ss_pred e-------------------ecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC-CCceEEEEe--ccchhhcc
Confidence 9 9999999999999999999999998888888999988875 899999887 45666677
Q ss_pred ccccch----hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEE
Q 015777 195 EAELDL----SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADII 270 (400)
Q Consensus 195 ~~~l~~----~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl 270 (400)
+++++. +.++.++++|++++.. +...+...++++.++++|+++++|++.... .+..++.+.++++++|++
T Consensus 166 ~~~i~~~~~~~~i~~a~~~~~~g~~~--~~~~~~~~~~~~~a~~~g~~v~ldls~~~~----~~~~~~~l~~ll~~~Dil 239 (372)
T 3uq6_A 166 LAHIEQPHVWSLVEKAQVYYIAGFVI--NTCYEGMLKIAKHSLENEKLFCFNLSAPFL----SQFNTKEVDEMISYSNIV 239 (372)
T ss_dssp HHHHTSHHHHHHHHHCSEEEEEGGGH--HHHHHHHHHHHHHHHHTTCEEEEECCCHHH----HHHCHHHHHHHHTTCSEE
T ss_pred hhhhhhhhHHHHhhcccEEEEecccc--cccHHHHHHHHHHHHHcCCeEeeccccchh----hhhhHHHHHHHhhcCCcc
Confidence 777653 5678899999998754 345677888999999999999999863211 233456778889999999
Q ss_pred EcCHhHHhcccCCCC---CcHHHHHHHHHh-------CCCcEEEEEecCCcEEEEeCCc--eEE--Ecccc-ccccCCCC
Q 015777 271 KISEEEISFLTQGED---PYDDAVVYKLFH-------ANLKLLLVTEGPDGCRYYTKDF--SGR--VQGLK-VEAVDATG 335 (400)
Q Consensus 271 ~~N~~E~~~l~~~~~---~~~~~~~~~l~~-------~g~~~vvvT~G~~G~~~~~~~~--~~~--vpa~~-v~vvDttG 335 (400)
++|++|++.|++... .+.++.++.+.+ .+.+.||||+|++|++++.+++ ... +++.+ .++|||||
T Consensus 240 ~~Ne~Ea~~l~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtG 319 (372)
T 3uq6_A 240 FGNESEAEAYGEVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNG 319 (372)
T ss_dssp EEEHHHHHHHHHHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTT
T ss_pred cCCHHHHHHHhCCCCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCc
Confidence 999999999987543 233455555544 4678999999999999998763 233 34433 47999999
Q ss_pred chHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHh
Q 015777 336 AGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIH 396 (400)
Q Consensus 336 AGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~ 396 (400)
|||+|+|||+++|++|++ +++|+++|+++|+.+|++.|+ .+|++++++-.|+
T Consensus 320 AGDaF~agfl~~l~~g~~-------l~~a~~~a~~aAa~vv~~~Ga--~lp~r~~~~lkln 371 (372)
T 3uq6_A 320 AGDAFAAGFIADYIRGKP-------MITSLHAAVKAAAYIICRSGF--SLGSRDSYSLKIN 371 (372)
T ss_dssp HHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHHTSSSS--CCCCGGGCC----
T ss_pred hHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHcCCCC--CCCChhHHHHHhc
Confidence 999999999999999999 999999999999999999997 4688887764443
No 39
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=3.1e-42 Score=334.21 Aligned_cols=292 Identities=22% Similarity=0.197 Sum_probs=236.7
Q ss_pred CCcEEEEccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
+|.++|+|++++|++..+++ +.. ....+...+||++.|+|++|+|||.++.++|. +
T Consensus 2 ~m~i~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~-------------------v 61 (323)
T 2f02_A 2 SLIVTVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGV-------------------L 61 (323)
T ss_dssp CCEEEEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEE-------------------E
T ss_pred ceEEEEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEE-------------------e
Confidence 46899999999999999887 432 23467889999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhcCCccEE
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLITKAKIF 209 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i~~~~~v 209 (400)
|+ .+|+++++.|+++||+++++...++ |++++++++++ +++++.. +++ .+++++++. +.++++|++
T Consensus 62 G~-~~G~~i~~~L~~~gV~~~~v~~~~~--t~~~~~~~~~~-~~~~~~~--~g~--~l~~~~~~~~~~~~~~~~~~~~~v 133 (323)
T 2f02_A 62 GG-FHGAFIANELKKANIPQAFTSIKEE--TRDSIAILHEG-NQTEILE--AGP--TVSPEEISNFLENFDQLIKQAEIV 133 (323)
T ss_dssp EH-HHHHHHHHHHHHTTCCBCCEEESSC--CEEEEEEEETT-EEEEEEE--CCC--BCCHHHHHHHHHHHHHHHTTCSEE
T ss_pred cc-chHHHHHHHHHHCCCceeEEEcCCC--CeeEEEEEcCC-CeEEEEC--CCC--CCCHHHHHHHHHHHHHhccCCCEE
Confidence 96 6999999999999999999887654 56666666665 6655443 333 255554432 246899999
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC---
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP--- 286 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~--- 286 (400)
|+.++... ....+.+.++++.+++.|+++++||+. ..+.+.+..+ +++|++++|++|++.|++....
T Consensus 134 ~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~Dp~~--------~~~~~~l~~~-~~~dil~~N~~E~~~l~g~~~~~~~ 203 (323)
T 2f02_A 134 TISGSLAK-GLPSDFYQELVQKAHAQEVKVLLDTSG--------DSLRQVLQGP-WKPYLIKPNLEELEGLLGQDFSENP 203 (323)
T ss_dssp EEESCCCB-TSCTTHHHHHHHHHHHTTCEEEEECCT--------HHHHHHHHSS-CCCSEECCBHHHHHHHHTCCCCSSC
T ss_pred EEECCCCC-CCChHHHHHHHHHHHHCCCEEEEECCh--------HHHHHHHhcc-CCCeEEecCHHHHHHHhCCCCCCCc
Confidence 98654332 223457788899999999999999962 2222222211 5899999999999999987632
Q ss_pred --cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 287 --YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 287 --~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
+..+.+++++++|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|
T Consensus 204 ~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a 276 (323)
T 2f02_A 204 LAAVQTALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAP-------AAEL 276 (323)
T ss_dssp HHHHHHHHTSGGGTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHH
Confidence 2234566777889999999999999999998888899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|+++|++++++.|+. +|++++++++++++
T Consensus 277 ~~~A~~~aa~~v~~~G~~--~~~~~ev~~~~~~~ 308 (323)
T 2f02_A 277 LKWGMAAGMANAQERMTG--HVDVENVKKHLMNI 308 (323)
T ss_dssp HHHHHHHHHHHHHSSSSS--CCCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCcC--CCCHHHHHHHhhcE
Confidence 999999999999999974 69999999998765
No 40
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=3.6e-43 Score=344.96 Aligned_cols=287 Identities=21% Similarity=0.264 Sum_probs=230.6
Q ss_pred CCCcEEEEccceeecccC--cCCC----Ccc--CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeecc
Q 015777 59 ESPLVVCFGEMLIDFVPT--VSGL----SLA--ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIIL 130 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~--~~~~----~~~--~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~ 130 (400)
.+++|+|+|++++|++.. +++. |.+ ....+...+||+ .|+|++|+|||.++.++|.
T Consensus 52 ~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~--------------- 115 (352)
T 4e84_A 52 ARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCV--------------- 115 (352)
T ss_dssp TTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEE---------------
T ss_pred CCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEE---------------
Confidence 457899999999999875 3332 222 335678899998 8999999999999999999
Q ss_pred CCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCcccc--chhhcCCccE
Q 015777 131 PCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAEL--DLSLITKAKI 208 (400)
Q Consensus 131 ~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l--~~~~i~~~~~ 208 (400)
+|+|.+|+++++.|+++||++ .+...++.+|+.+++.++.++++..+.+. .........+.+ ..+.++++|+
T Consensus 116 ----vG~D~~G~~i~~~L~~~GV~~-~~~~~~~~~T~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 189 (352)
T 4e84_A 116 ----VGCDEPGERIVELLGSSGVTP-HLERDPALPTTIKLRVLARQQQLLRVDFE-AMPTHEVLLAGLARFDVLLPQHDV 189 (352)
T ss_dssp ----EESSHHHHHHHHHHTTTSCEE-EEEEETTSCCCEEEEEEESSCEEEEEEEC-CCCCHHHHHHHHHHHHHHGGGCSE
T ss_pred ----eCCChhHHHHHHHHHHcCCce-eeEECCCCCCceEEEEEcCCceEEEEEcC-CCCCHHHHHHHHHHHHHhcccCCE
Confidence 999999999999999999999 45556777999999998876665444332 122211222111 1356889999
Q ss_pred EEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC--
Q 015777 209 FHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP-- 286 (400)
Q Consensus 209 v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~-- 286 (400)
+|++++.... .+...++++.++++|+++++||+++ .| ++++++|++++|++|++.|++....
T Consensus 190 v~~~g~~~~~---~~~~~~~~~~a~~~g~~v~~D~~~~--~~-----------~~l~~~dil~pN~~Ea~~l~g~~~~~~ 253 (352)
T 4e84_A 190 VLMSDYAKGG---LTHVTTMIEKARAAGKAVLVDPKGD--DW-----------ARYRGASLITPNRAELREVVGQWKSED 253 (352)
T ss_dssp EEEECCSSSS---CSSHHHHHHHHHHTTCEEEEECCSS--CC-----------STTTTCSEECCBHHHHHHHHCCCSSHH
T ss_pred EEEeCCCCCC---HHHHHHHHHHHHhcCCEEEEECCCc--ch-----------hhccCCcEEcCCHHHHHHHhCCCCCHH
Confidence 9998765322 1236778889999999999999753 22 3678999999999999999993211
Q ss_pred cHHHHHHHHHh-CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHH
Q 015777 287 YDDAVVYKLFH-ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDAL 365 (400)
Q Consensus 287 ~~~~~~~~l~~-~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al 365 (400)
+..+.++++++ .|++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|++ +++|+
T Consensus 254 ~~~~~a~~l~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~-------l~~al 326 (352)
T 4e84_A 254 DLRARVANLRAELDIDALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVP-------LVDAV 326 (352)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCC-------HHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCC-------HHHHH
Confidence 12345566764 69999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHH
Q 015777 366 RFANACGALTVMERGAIPALPTREAVL 392 (400)
Q Consensus 366 ~~A~a~Aa~~v~~~G~~~~~p~~~~l~ 392 (400)
++|+++|+++|++.|+.+ ++++||+
T Consensus 327 ~~A~aaaa~~v~~~Ga~~--~t~~el~ 351 (352)
T 4e84_A 327 VLANRAAGIVVGKLGTAT--VDYDELF 351 (352)
T ss_dssp HHHHHHHHHHHTSSSSCC--CCHHHHT
T ss_pred HHHHHHHHHHhcCCCCcc--CCHHHhc
Confidence 999999999999999876 7999885
No 41
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.2e-42 Score=338.30 Aligned_cols=291 Identities=14% Similarity=0.133 Sum_probs=238.1
Q ss_pred CCCcEEEEccceeecccCcCCCCcc----CC---CCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA----ES---PAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILP 131 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~----~~---~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~ 131 (400)
.-|.++|+|++++|++..+++ +.+ .. ..+...+||++.|+|++|+|||.++.++|.
T Consensus 11 ~~~~~~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~---------------- 73 (331)
T 2ajr_A 11 HHMVLTVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGF---------------- 73 (331)
T ss_dssp -CCEEEEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEE----------------
T ss_pred cceEEEEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEE----------------
Confidence 347899999999999999887 433 23 577889999999999999999999999999
Q ss_pred CCcCCCChHHHHHHHHHHHCC--CCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------hhc
Q 015777 132 CPKVGADEFGYMLADILKENN--VNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------SLI 203 (400)
Q Consensus 132 ~~~vG~D~~g~~i~~~L~~~g--V~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~~i 203 (400)
+|+| +|+++++.|+++| |+++++...++ |++++++++++|++.+.+.. +++ .+++++++. +.+
T Consensus 74 ---vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~~--t~~~~~~v~~~g~~~~~~~~-~g~--~l~~~~~~~~~~~~~~~~ 144 (331)
T 2ajr_A 74 ---VGGY-MGKILVEELRKISKLITTNFVYVEGE--TRENIEIIDEKNKTITAINF-PGP--DVTDMDVNHFLRRYKMTL 144 (331)
T ss_dssp ---EEHH-HHHHHHHHHHHHCTTEEEEEEEESSC--CEEEEEEEETTTTEEEEEEC-CCC--CCCHHHHHHHHHHHHHHH
T ss_pred ---ecCc-hHHHHHHHHHHcCCccceEEEEcCCC--CeEEEEEEeCCCceEEEEeC-CCC--CCCHHHHHHHHHHHHHhc
Confidence 9998 9999999999999 99998877653 66667777778988333432 333 255554432 356
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc---cCcEEEcCHhH-Hhc
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE---TADIIKISEEE-ISF 279 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~---~~dvl~~N~~E-~~~ 279 (400)
++++++|+++.... ..+.+.+.++++.++++|+++++||+. +. +.++++ ++|++++|++| ++.
T Consensus 145 ~~~~~v~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~----~~~~l~~~~~~dil~~N~~E~~~~ 211 (331)
T 2ajr_A 145 SKVDCVVISGSIPP-GVNEGICNELVRLARERGVFVFVEQTP--------RL----LERIYEGPEFPNVVKPDLRGNHAS 211 (331)
T ss_dssp TTCSEEEEESCCCT-TSCTTHHHHHHHHHHHTTCEEEEECCH--------HH----HHHHHHSSCCCSEECCCCTTCCSC
T ss_pred ccCCEEEEECCCCC-CCCHHHHHHHHHHHHHcCCEEEEECCh--------HH----HHHHHhcCCCCeEEEeCccchHHH
Confidence 88999999764322 233467788899999999999999962 22 334444 49999999999 999
Q ss_pred ccCCCCCcH---HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEc-cccccccCCCCchHHHHHHHHHHHH-cCCcc
Q 015777 280 LTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQ-GLKVEAVDATGAGDAFVAGILSQLS-TDFSL 354 (400)
Q Consensus 280 l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vp-a~~v~vvDttGAGDaF~Agfl~~l~-~g~~~ 354 (400)
|++....+. .+.+++++++ ++.|+||+|++|++++++++.+++| +++++++|||||||+|+|||+++|+ +|++
T Consensus 212 l~g~~~~~~~~~~~~~~~l~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~- 289 (331)
T 2ajr_A 212 FLGVDLKTFDDYVKLAEKLAEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGAN- 289 (331)
T ss_dssp BTTBCCCSHHHHHHHHHHHHHH-SSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSC-
T ss_pred HhCCCCCCHHHHHHHHHHHHHh-cCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCC-
Confidence 998764332 3456778777 9999999999999999888888999 9999999999999999999999999 9999
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 355 LQKEDQLRDALRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 355 ~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|+++|+++|++++++.|+ .+|++++++++++++
T Consensus 290 ------~~~al~~A~a~aa~~v~~~G~--~~~~~~ev~~~~~~~ 325 (331)
T 2ajr_A 290 ------FLEMAKFGFASALAATRRKEK--YMPDLEAIKKEYDHF 325 (331)
T ss_dssp ------HHHHHHHHHHHHHHHTTSSSC--CCCCHHHHHTTGGGE
T ss_pred ------HHHHHHHHHHHHHHHHcCcCc--CCCCHHHHHHHHhhc
Confidence 999999999999999999997 469999999988764
No 42
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=2.1e-43 Score=340.10 Aligned_cols=277 Identities=13% Similarity=0.212 Sum_probs=231.2
Q ss_pred CCCcEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
++++|+|+|++++|++..+++.|.. ....+...+||++.|+|++|++||.++.++|. +
T Consensus 19 ~~~~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------v 79 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSA-------------------V 79 (306)
T ss_dssp CCEEEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEE-------------------E
T ss_pred CCCcEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEE-------------------E
Confidence 4468999999999999988776621 23456788999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccc
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSIS 215 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~ 215 (400)
|+| +|+++++.|++.||+++++...++.+|+.+++.+++ |+|+++.++ ++...++ ++++ ++++++|+++..
T Consensus 80 G~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~--ga~~~~~-~~l~----~~~~~v~~~~~~ 150 (306)
T 3bf5_A 80 GMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQ--GAMAAWA-PQLA----DEYEYVHFSTGP 150 (306)
T ss_dssp ETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEEC--THHHHCC-CCCC----SCEEEEEECSSS
T ss_pred eCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcC-CeeEEEEeC--Chhhhhh-Hhhc----CCCCEEEECChH
Confidence 999 999999999999999999877777789999999988 999888773 4544455 4442 689999998753
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
...++++.+++ ++++||+.+...| ..+.+.++++++|++++|++|++.|++....+.. ++
T Consensus 151 --------~~~~~~~~a~~---~v~~D~~~~~~~~-----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~----~l 210 (306)
T 3bf5_A 151 --------NYLDMAKSIRS---KIIFDPSQEIHKY-----SKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP----KV 210 (306)
T ss_dssp --------SHHHHHHHCCS---EEEECCGGGGGGS-----CHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC----SS
T ss_pred --------HHHHHHHHhCC---cEEEcCchhhhhc-----cHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc----cE
Confidence 34566676665 9999998532111 1345667889999999999999999875443221 11
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
.|+||+|++|++++.+++.+++|+++++ +|||||||+|.|||+++|++|++ +++|+++|+++|+++
T Consensus 211 ------~vvvT~G~~Ga~~~~~~~~~~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~ 276 (306)
T 3bf5_A 211 ------TTIVTNGERGSSLFMDGKKYDFPAIPSS-GDTVGAGDSFRAGLYLALYNRRS-------IEKGMIYGTIIAHHV 276 (306)
T ss_dssp ------CEEEEEGGGEEEEEETTEEEEEECCCCC-SCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred ------EEEEeecccCeEEEeCCcEEEecCCcCC-CCCCCccHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 1999999999999998888899999999 99999999999999999999999 999999999999999
Q ss_pred hcc--cCCCCCCCCHHHHHHHHhC
Q 015777 376 VME--RGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 376 v~~--~G~~~~~p~~~~l~~~l~~ 397 (400)
+++ .|+.+.+|+++++++++++
T Consensus 277 v~~~~~G~~~~~p~~~ev~~~~~~ 300 (306)
T 3bf5_A 277 IDDGIENFSLNMEDLERETENYRR 300 (306)
T ss_dssp HHHCSTTCCCCHHHHHHHHHHHHH
T ss_pred hccCCccccccCCCHHHHHHHHHh
Confidence 999 9998788999999998865
No 43
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=4.6e-42 Score=330.65 Aligned_cols=288 Identities=22% Similarity=0.249 Sum_probs=230.4
Q ss_pred cEEEE-ccceeecccCcCCCCcc----CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCC
Q 015777 62 LVVCF-GEMLIDFVPTVSGLSLA----ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVG 136 (400)
Q Consensus 62 ~v~vi-G~~~vD~~~~~~~~~~~----~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG 136 (400)
+|+++ |++++|++..+++. .. ....+...+||++.|+|++|++||.++.++|. +|
T Consensus 3 ~I~~v~g~~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG 62 (309)
T 3cqd_A 3 RIYTLTLAPSLDSATITPQI-YPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFP-------------------AG 62 (309)
T ss_dssp CEEEECSSCEEEEEEEESCC-CSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEE-------------------EC
T ss_pred eEEEEeccchheEEEEcCCC-cCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEE-------------------ec
Confidence 57755 69999999988873 32 24567889999999999999999999999999 99
Q ss_pred CChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEE-EcCCCCeeEEEecCCCccccCCccccc------hhhcCCccEE
Q 015777 137 ADEFGYMLADILKENNVNGAGMRFDPGARTALAFVT-LRSDGEREFMFYRNPSADMLLQEAELD------LSLITKAKIF 209 (400)
Q Consensus 137 ~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~-~~~~g~r~~~~~~~~~~~~~l~~~~l~------~~~i~~~~~v 209 (400)
+| +|+++++.|+++||+++++...++.++ ++++ ++++|+++++.. ++.. +++++++ .+.+++ +++
T Consensus 63 ~d-~g~~i~~~l~~~gv~~~~v~~~~~t~~--~~~~~~~~~g~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~-~~v 134 (309)
T 3cqd_A 63 GA-TGEHLVSLLADENVPVATVEAKDWTRQ--NLHVHVEASGEQYRFVM--PGAA--LNEDEFRQLEEQVLEIESG-AIL 134 (309)
T ss_dssp HH-HHHHHHHHHHHTTCCEEEEECSSCCCC--CEEEEETTTCCEEEEEC--CCCC--CCHHHHHHHHHHHHTSCTT-CEE
T ss_pred Cc-hHHHHHHHHHHcCCCceeEEcCCCCee--EEEEEEcCCCCEEEEEc--CCCC--CCHHHHHHHHHHHHHhhcC-CEE
Confidence 97 999999999999999999876654444 4455 678888866554 3332 4444443 134677 999
Q ss_pred EEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccC-cEEEcCHhHHhcccCCCCC--
Q 015777 210 HYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETA-DIIKISEEEISFLTQGEDP-- 286 (400)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~-dvl~~N~~E~~~l~~~~~~-- 286 (400)
|++++... ....+.+.++++.+++.|+++++||+. ..+++. +.+.+ |++++|++|++.|++....
T Consensus 135 ~~~g~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~~~~~~---l~~~~~dil~~N~~E~~~l~g~~~~~~ 202 (309)
T 3cqd_A 135 VISGSLPP-GVKLEKLTQLISAAQKQGIRCIVDSSG--------EALSAA---LAIGNIELVKPNQKELSALVNRELTQP 202 (309)
T ss_dssp EEESCCCT-TCCHHHHHHHHHHHHTTTCEEEEECCH--------HHHHHH---TTTCCBSEECCBHHHHHHHHTSCCCST
T ss_pred EEECCCCC-CCCHHHHHHHHHHHHHcCCeEEEECCh--------HHHHHH---HHhCCCEEEeeCHHHHHHHhCCCCCCH
Confidence 98765332 234677888999999999999999962 222222 23688 9999999999999987532
Q ss_pred -cHHHHHHHHHhCC-CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHH
Q 015777 287 -YDDAVVYKLFHAN-LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDA 364 (400)
Q Consensus 287 -~~~~~~~~l~~~g-~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~a 364 (400)
+..+.++++++.| ++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|
T Consensus 203 ~~~~~~~~~l~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~-------~~~a 275 (309)
T 3cqd_A 203 DDVRKAAQEIVNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENAS-------LEEM 275 (309)
T ss_dssp THHHHHHHHHHHTTSBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCC-------HHHH
Confidence 2345677888899 999999999999999988888899999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 365 LRFANACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 365 l~~A~a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
+++|+++|+.++++.|+. .|++++++++++++
T Consensus 276 ~~~A~~~aa~~~~~~G~~--~~~~~~v~~~~~~~ 307 (309)
T 3cqd_A 276 VRFGVAAGSAATLNQGTR--LCSHDDTQKIYAYL 307 (309)
T ss_dssp HHHHHHHHHHHTC-------CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcCCC--CCCHHHHHHHHHHh
Confidence 999999999999999974 59999999998875
No 44
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=6.9e-43 Score=341.62 Aligned_cols=291 Identities=20% Similarity=0.296 Sum_probs=240.9
Q ss_pred CCcEEEEccceeecccCcCC-------CCcc-----------------CCCCceecCCChHHHHHHHHHHcC----CCce
Q 015777 60 SPLVVCFGEMLIDFVPTVSG-------LSLA-----------------ESPAFKKAPGGAPANVAVGIARLG----GSSA 111 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~-------~~~~-----------------~~~~~~~~~GG~~~N~A~~larLG----~~~~ 111 (400)
.++|+|+|++++|++..+++ .... +...+...+||++.|+|+++++|| .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 35799999999999988775 1110 124677899999999999999996 8999
Q ss_pred eeecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccc
Q 015777 112 FIGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADM 191 (400)
Q Consensus 112 ~i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~ 191 (400)
++|. +|+|.+|+++++.|+++||+++++.. ++.+|+.+++.++ +|+|+++.+ .++..
T Consensus 86 ~ig~-------------------vG~D~~G~~i~~~L~~~gv~~~~v~~-~~~~T~~~~~~~~-~g~r~~~~~--~~a~~ 142 (345)
T 1bx4_A 86 FFGC-------------------IGIDKFGEILKRKAAEAHVDAHYYEQ-NEQPTGTCAACIT-GDNRSLIAN--LAAAN 142 (345)
T ss_dssp EEEE-------------------EESSHHHHHHHHHHHHTTCEEEEEEE-SSSCCCEEEEEEE-TTEEEEEEE--CGGGG
T ss_pred EEEE-------------------eCCChhHHHHHHHHHHcCCceeeeec-CCCCCceEEEEEc-CCceEeeec--cchHh
Confidence 9999 99999999999999999999998864 5668999999887 788877655 45555
Q ss_pred cCCcc-ccc----hhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhcc
Q 015777 192 LLQEA-ELD----LSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWET 266 (400)
Q Consensus 192 ~l~~~-~l~----~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~ 266 (400)
.++++ +++ .+.+++++++|++++... .+.+.+.++++.++++|+++++|+.. ..| .+..++.+.+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~g~~v~~d~~~--~~~--~~~~~~~~~~~l~~ 216 (345)
T 1bx4_A 143 CYKKEKHLDLEKNWMLVEKARVCYIAGFFLT--VSPESVLKVAHHASENNRIFTLNLSA--PFI--SQFYKESLMKVMPY 216 (345)
T ss_dssp GCCGGGTTTSHHHHHHHHHCSEEEEEGGGGG--TCHHHHHHHHHHHHHTTCEEEEECCS--HHH--HHHTHHHHHHHGGG
T ss_pred hcCcccccCcHHHHHHHhhCCEEEEEEEecc--CCHHHHHHHHHHHHHcCCEEEEeCCc--HHH--HHHHHHHHHHHhcc
Confidence 66666 665 355778999999887543 34578888999999999999999852 112 12234566778999
Q ss_pred CcEEEcCHhHHhcccCCC---CCcHHHHHHHHHh------CCCcEEEEEecCCcEEEEeCCceEEEccccc---cccCCC
Q 015777 267 ADIIKISEEEISFLTQGE---DPYDDAVVYKLFH------ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV---EAVDAT 334 (400)
Q Consensus 267 ~dvl~~N~~E~~~l~~~~---~~~~~~~~~~l~~------~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v---~vvDtt 334 (400)
+|++++|++|++.|++.. ..+.+++++++++ .|++.|+||+|++|++++.+++.+++|++++ +++|||
T Consensus 217 ~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDtt 296 (345)
T 1bx4_A 217 VDILFGNETEAATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTN 296 (345)
T ss_dssp CSEEEEEHHHHHHHHHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHH
T ss_pred CCEEeCCHHHHHHHhcccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCC
Confidence 999999999999998643 2345667788887 5999999999999999998888889999887 899999
Q ss_pred CchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCH
Q 015777 335 GAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAIPALPTR 388 (400)
Q Consensus 335 GAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~~~~p~~ 388 (400)
||||+|+|||+++|++|++ +++|+++|+++|++++++.|+. +|++
T Consensus 297 GAGDaf~ag~~~~l~~g~~-------~~~a~~~A~~~aa~~v~~~G~~--~p~~ 341 (345)
T 1bx4_A 297 GAGDAFVGGFLSQLVSDKP-------LTECIRAGHYAASIIIRRTGCT--FPEK 341 (345)
T ss_dssp HHHHHHHHHHHHHHTTTCC-------HHHHHHHHHHHHHHHTTSSSSC--CCSS
T ss_pred CcchHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhccCCC--CCCc
Confidence 9999999999999999999 9999999999999999999975 4543
No 45
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=2.5e-42 Score=342.61 Aligned_cols=288 Identities=22% Similarity=0.284 Sum_probs=235.1
Q ss_pred CCCcEEEEccceeecccCcCC-C-----Ccc-----------------CCCCceecCCChHHHHHHHHHHc---CCCcee
Q 015777 59 ESPLVVCFGEMLIDFVPTVSG-L-----SLA-----------------ESPAFKKAPGGAPANVAVGIARL---GGSSAF 112 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~-~-----~~~-----------------~~~~~~~~~GG~~~N~A~~larL---G~~~~~ 112 (400)
++++|+|+|++++|++..+++ . +.. +...+...+||++.|+|++|++| |.++.+
T Consensus 31 ~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~ 110 (383)
T 2abs_A 31 GPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGY 110 (383)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEEE
Confidence 446899999999999988765 1 111 13356778999999999999999 899999
Q ss_pred eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCcccc
Q 015777 113 IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADML 192 (400)
Q Consensus 113 i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~ 192 (400)
+|. ||+|.+|+++++.|+++||+++++. .++.+|+.+++.++ +|+|+++.+ .++...
T Consensus 111 ig~-------------------vG~D~~G~~i~~~L~~~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~--~~a~~~ 167 (383)
T 2abs_A 111 MGA-------------------IGDDPRGQVLKELCDKEGLATRFMV-APGQSTGVCAVLIN-EKERTLCTH--LGACGS 167 (383)
T ss_dssp EEE-------------------ECSSHHHHHHHHHHHHHTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEE--CGGGGG
T ss_pred EEE-------------------ecCChhHHHHHHHHHHcCCceeeee-cCCCCCeEEEEEEc-CCceeEeec--cChhhh
Confidence 999 9999999999999999999999886 45669999999987 788887665 455555
Q ss_pred CCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhh-CCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE
Q 015777 193 LQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKD-AGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK 271 (400)
Q Consensus 193 l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~-~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~ 271 (400)
+++++...+.+++++++|++++... .+.+.+.++++.+++ .|+++++|+.. ..| .+..++.+.++++++|+++
T Consensus 168 l~~~~~~~~~l~~~~~v~~~g~~~~--~~~~~~~~~~~~a~~~~g~~v~~d~~~--~~~--~~~~~~~l~~ll~~~dil~ 241 (383)
T 2abs_A 168 FRLPEDWTTFASGALIFYATAYTLT--ATPKNALEVAGYAHGIPNAIFTLNLSA--PFC--VELYKDAMQSLLLHTNILF 241 (383)
T ss_dssp CCCCTTHHHHTTTCCEEEEEGGGGT--TCHHHHHHHHHHHHTSTTCEEEEECCC--HHH--HHHCHHHHHHHHHTCSEEE
T ss_pred CChhhhhHHHhhcCCEEEEeeeccc--CCHHHHHHHHHHHHHhcCCEEEEeCCc--HHH--HHHHHHHHHHHHhhCCEEe
Confidence 6655444467889999999887553 335788889999999 89999999852 112 1233456677899999999
Q ss_pred cCHhHHhcccCCCC---------------CcHHHHHHHHHh------C-CCcEEEEEecCCcEEEE-----eCCceEEEc
Q 015777 272 ISEEEISFLTQGED---------------PYDDAVVYKLFH------A-NLKLLLVTEGPDGCRYY-----TKDFSGRVQ 324 (400)
Q Consensus 272 ~N~~E~~~l~~~~~---------------~~~~~~~~~l~~------~-g~~~vvvT~G~~G~~~~-----~~~~~~~vp 324 (400)
+|++|++.|++... .+.+++++++.+ . |++.||||+|++|++++ .+++.+++|
T Consensus 242 pN~~Ea~~L~g~~~~~~~~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~ 321 (383)
T 2abs_A 242 GNEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVG 321 (383)
T ss_dssp EEHHHHHHHHHHHTCC----------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CCHHHHHHHhcccCcccccccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEec
Confidence 99999999976431 112345566766 4 89999999999999998 555677889
Q ss_pred cccc---cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcccCCC
Q 015777 325 GLKV---EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVMERGAI 382 (400)
Q Consensus 325 a~~v---~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~~G~~ 382 (400)
++++ +++|||||||+|+|||+++|++|++ +++|+++|+++|+++|++.|+.
T Consensus 322 ~~~v~~~~vvDttGAGDaF~ag~~~~l~~g~~-------l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 322 VPVVAAEKIVDTNGAGDAFVGGFLYALSQGKT-------VKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp CCCCCGGGCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTSSSCC
T ss_pred CccCCcCCcCcCCChHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHHhcCCcc
Confidence 8877 8999999999999999999999999 9999999999999999999986
No 46
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=2.1e-41 Score=326.85 Aligned_cols=276 Identities=18% Similarity=0.277 Sum_probs=227.5
Q ss_pred CCcEEEEccceeecccCcCCCCccC----CCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcC
Q 015777 60 SPLVVCFGEMLIDFVPTVSGLSLAE----SPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKV 135 (400)
Q Consensus 60 ~~~v~viG~~~vD~~~~~~~~~~~~----~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~v 135 (400)
+++|+|+|++++|++..+++.|... .......+||++.|+|++|+|||.++.++|. +
T Consensus 17 ~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~-------------------v 77 (312)
T 2hlz_A 17 GSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGS-------------------M 77 (312)
T ss_dssp CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEE-------------------E
T ss_pred CCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEE-------------------e
Confidence 4579999999999998887765432 3345678999999999999999999999999 9
Q ss_pred CCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEc-CCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccc
Q 015777 136 GADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLR-SDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSI 214 (400)
Q Consensus 136 G~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~-~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~ 214 (400)
|+|.+|+++++.|+++||+++++...++.+|++++++++ .+|+|+++++++ ....+++++++...+++++++|++++
T Consensus 78 G~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~--~~~~~~~~~~~~~~l~~~~~v~~~~~ 155 (312)
T 2hlz_A 78 APGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDR--SLPDVSATDFEKVDLTQFKWIHIEGR 155 (312)
T ss_dssp CSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECC--CCCCCCHHHHHTSCGGGEEEEEEECS
T ss_pred cCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCC--ccccCCHHHhhHhhhccCCEEEEecc
Confidence 999999999999999999999998876667777777665 579999888743 34556777666556788999999886
Q ss_pred cccCchhHHHHHHHHHHHhhC--------CCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCC
Q 015777 215 SLITEPCKSAHIAAAKAAKDA--------GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDP 286 (400)
Q Consensus 215 ~~~~~~~~~~~~~~~~~a~~~--------g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~ 286 (400)
. .+...++++.+++. ++++++|+... ++.+.++++++|++++|++|++.+ +. .
T Consensus 156 ~------~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~----------~~~~~~~l~~~dil~~n~~ea~~l-g~--~ 216 (312)
T 2hlz_A 156 N------ASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP----------REELFQLFGYGDVVFVSKDVAKHL-GF--Q 216 (312)
T ss_dssp S------HHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC----------CGGGGGGGGSSSEEEECHHHHHHT-TC--C
T ss_pred C------HHHHHHHHHHHHHhcccccCCCCeEEEEEcccc----------hHHHHHHHhcCCEEEEcHHHHHHc-CC--C
Confidence 3 24556677777665 78999998532 235667899999999999999987 54 2
Q ss_pred cHHHHHHHHHhCCC--cEEEEEecCCcEEEEeC-CceEEEccc-cccccCCCCchHHHHHHHHHHHHcCCccccchHHHH
Q 015777 287 YDDAVVYKLFHANL--KLLLVTEGPDGCRYYTK-DFSGRVQGL-KVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLR 362 (400)
Q Consensus 287 ~~~~~~~~l~~~g~--~~vvvT~G~~G~~~~~~-~~~~~vpa~-~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~ 362 (400)
+.++.++.+.+.+. +.|+||+|++|++++++ ++.+++|++ +++++|||||||+|.|+|+++|++|++ ++
T Consensus 217 ~~~~~~~~l~~~~~~g~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~-------~~ 289 (312)
T 2hlz_A 217 SAEEALRGLYGRVRKGAVLVCAWAEEGADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRS-------VQ 289 (312)
T ss_dssp SHHHHHHHHGGGSCTTCEEEEECGGGCEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCC-------HH
T ss_pred CHHHHHHHHHHhcCCCCEEEEEecccCeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCC-------HH
Confidence 34566777766543 89999999999999875 457789986 468999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHHhcccCCC
Q 015777 363 DALRFANACGALTVMERGAI 382 (400)
Q Consensus 363 ~al~~A~a~Aa~~v~~~G~~ 382 (400)
+|+++|+++|+++|++.|+.
T Consensus 290 ~a~~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 290 EALRFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp HHHHHHHHHHHHHHTSSSSG
T ss_pred HHHHHHHHHHHHHHhhcCcc
Confidence 99999999999999999963
No 47
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=5.1e-42 Score=331.32 Aligned_cols=292 Identities=17% Similarity=0.226 Sum_probs=231.8
Q ss_pred CCCcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCC-CceeeecccccccccceeeeccCCCcCCC
Q 015777 59 ESPLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGG-SSAFIGKTTLFCFYEHVKVIILPCPKVGA 137 (400)
Q Consensus 59 ~~~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~-~~~~i~~~~~~~~~~~~~~~~~~~~~vG~ 137 (400)
|+|+|+|||++++|++.... ......+||++.|+|+++++||. ++.++|. +|+
T Consensus 1 M~~~ilviG~~~iD~~~~~~-------~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~-------------------vG~ 54 (313)
T 3kd6_A 1 MSLSLLVIGSLAFDDIETPF-------GRSDNTLGGSSTYIALSASYFTDEPIRMVGV-------------------VGS 54 (313)
T ss_dssp --CCEEEESCCEEEEEECSS-------CEEEEEEECHHHHHHHHHTTTCSSCEEEEEE-------------------EET
T ss_pred CCccEEEEeEEEEeeecCCC-------CcccccCCCHHHHHHHHHHHhCCCceEEEEe-------------------cCC
Confidence 34689999999999997532 24578999999999999999999 9999999 999
Q ss_pred ChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEE--EcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEcccc
Q 015777 138 DEFGYMLADILKENNVNGAGMRFDPGARTALAFVT--LRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSIS 215 (400)
Q Consensus 138 D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~--~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~ 215 (400)
| +|+++++.|+++||+++++.+.++.+|....-. .+.++++.+... .+....+.++ + .+.++++|++|++++.
T Consensus 55 D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~v~~~~~~ 129 (313)
T 3kd6_A 55 D-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQ--LNVFAEFDPH-V-PQYYRDSKFVCLGNID 129 (313)
T ss_dssp T-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEE--CGGGTTCCCC-C-CGGGTTCSEEEECSSC
T ss_pred C-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecc--cchHhhcCcc-c-hHHHccCCEEEEcCCC
Confidence 9 999999999999999999988876677432111 233445554443 2333333332 2 3568899999998753
Q ss_pred ccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHH
Q 015777 216 LITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKL 295 (400)
Q Consensus 216 ~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l 295 (400)
.+...++++.+ +.+.++++||. .+|. +...+.+.++++++|++++|++|++.|++.. +.++.++.+
T Consensus 130 ------~~~~~~~~~~~-~~~~~v~~Dp~---~~~~--~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l 195 (313)
T 3kd6_A 130 ------PELQLKVLDQI-DDPKLVVCDTM---NFWI--EGKPEELKKVLARVDVFIVNDSEARLLSGDP--NLVKTARII 195 (313)
T ss_dssp ------HHHHHHHHTTC-SSCSEEEEECC---HHHH--HHCHHHHHHHHTTCSEEEEEHHHHHHHHSCS--CHHHHHHHH
T ss_pred ------HHHHHHHHHHH-hhCCEEEEcCh---hhhh--hhhHHHHHHHHhcCCEEEeCHHHHHHHhCCC--CHHHHHHHH
Confidence 23445666666 57889999983 2231 2234667778999999999999999999865 346778889
Q ss_pred HhCCCcEEEEEecCCcEEEEeCCceEEEccccc-cccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHH
Q 015777 296 FHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKV-EAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANACGAL 374 (400)
Q Consensus 296 ~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v-~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~ 374 (400)
++.|++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|.++ .+.++++|+++|+++|++
T Consensus 196 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~--~~~~l~~a~~~a~~~aa~ 273 (313)
T 3kd6_A 196 REMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLESIYDPTGAGDTFAGGFIGHLARCGNT--SEAEMRKAVLYGSAMASF 273 (313)
T ss_dssp HTTSCSEEEEECTTSCEEEEETTEEEEECCCTTCCCSCCTTHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCCCcCCCCCccHHHHHHHHHHHHcCCCc--cccCHHHHHHHHHHHHHH
Confidence 999999999999999999999998999999998 79999999999999999999998820 122399999999999999
Q ss_pred HhcccCCCCC-CCCHHHHHHHHhC
Q 015777 375 TVMERGAIPA-LPTREAVLNAIHA 397 (400)
Q Consensus 375 ~v~~~G~~~~-~p~~~~l~~~l~~ 397 (400)
+|++.|+.+. .|++++|++++++
T Consensus 274 ~v~~~G~~~~~~~~~~ev~~~l~~ 297 (313)
T 3kd6_A 274 CVEQFGPYRYNDLDLLEVDDRYQS 297 (313)
T ss_dssp HTTSSTTGGGGTCCHHHHHHHHHH
T ss_pred HHeecCCCCCCCCCHHHHHHHHHH
Confidence 9999998753 5899999998865
No 48
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=7.7e-41 Score=321.80 Aligned_cols=285 Identities=21% Similarity=0.252 Sum_probs=233.9
Q ss_pred cEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
=+.+.|++++|++..++++... ....+...+||++.|+|++++|||.++.++|. +|+
T Consensus 2 i~tv~~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~-------------------vG~- 61 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGF-------------------LGG- 61 (306)
T ss_dssp EEEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEE-------------------EEH-
T ss_pred EEEEecCchheEEEEcCCcccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEE-------------------ecc-
Confidence 3677899999999998875221 24467788999999999999999999999999 998
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hh---cCCccEEEEcc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SL---ITKAKIFHYGS 213 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~---i~~~~~v~~~~ 213 (400)
.+|+++++.|+++||+++++...++ |++++++ .+|+++++.. .+. .+++++++. +. ++++|++|+++
T Consensus 62 ~~g~~i~~~L~~~gv~~~~v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g 133 (306)
T 2abq_A 62 FTGAYVRNALEKEEIGLSFIEVEGD--TRINVKI--KGKQETELNG--TAP--LIKKEHVQALLEQLTELEKGDVLVLAG 133 (306)
T ss_dssp HHHHHHHHHHHHTTCEECCEEESSC--CEEEEEE--ESSSCEEEBC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred hhHHHHHHHHHHcCCceEEEEcCCC--CceEEEE--eCCceEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEec
Confidence 8999999999999999999987543 5666655 4788865443 333 355554432 11 57899999866
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHhcccCCCCCcH---H
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYD---D 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~~l~~~~~~~~---~ 289 (400)
+... ..+.+.+.++++.++++|+++++||+ . +.+.++++ ++|++++|++|++.|++....+. .
T Consensus 134 ~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~--------~----~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 200 (306)
T 2abq_A 134 SVPQ-AMPQTIYRSMTQIAKERGAFVAVDTS--------G----EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAI 200 (306)
T ss_dssp CCCT-TSCTTHHHHHHHHHHTTTCEEEEECC--------H----HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHH
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCEEEEECC--------h----HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHH
Confidence 5332 23346778889999999999999995 2 23456788 99999999999999998754332 3
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++++++.|++.|+||+|++|++++.+++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+
T Consensus 201 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~-------~~~a~~~A~ 273 (306)
T 2abq_A 201 PHVQRLIGEGIESILVSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKS-------LEDAVPFAV 273 (306)
T ss_dssp HHHHHHHHTTCCEEEEECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 4567888889999999999999999988888899999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++++++. ++|++++++++++++
T Consensus 274 a~aa~~v~~~----~~p~~~ev~~~~~~~ 298 (306)
T 2abq_A 274 AAGSATAFSD----GFCTREEVERLQQQL 298 (306)
T ss_dssp HHHHHHHHSS----SCCCHHHHHHHHHHH
T ss_pred HHHHHHhcCc----CCCCHHHHHHHHhhE
Confidence 9999999998 468999999988764
No 49
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=1.9e-40 Score=318.77 Aligned_cols=285 Identities=20% Similarity=0.253 Sum_probs=232.4
Q ss_pred cEEEEccceeecccCcCCCCcc---CCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCC
Q 015777 62 LVVCFGEMLIDFVPTVSGLSLA---ESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGAD 138 (400)
Q Consensus 62 ~v~viG~~~vD~~~~~~~~~~~---~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D 138 (400)
-+.|.|++++|++..++++... ....+...+||++.|+|++++|||.++.++|. +|+
T Consensus 2 i~tvt~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~-------------------vG~- 61 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGF-------------------AGG- 61 (306)
T ss_dssp EEEEESSCEEEEEEECSSCCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEE-------------------ECH-
T ss_pred EEEEecCceEEEEEEcCCcccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEE-------------------ecC-
Confidence 4678899999999998874211 24567888999999999999999999999999 999
Q ss_pred hHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch---hh--cCCccEEEEcc
Q 015777 139 EFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL---SL--ITKAKIFHYGS 213 (400)
Q Consensus 139 ~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~---~~--i~~~~~v~~~~ 213 (400)
.+|+++++.|+++||+++++...++ |++++++ .+|++.++.. .++ .+.+++++. .+ ++++|++|+++
T Consensus 62 ~~g~~i~~~l~~~gv~~~~v~~~~~--t~~~~~~--~~g~~~~~~~--~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g 133 (306)
T 2jg5_A 62 FPGKFIIDTLNNSAIQSNFIEVDED--TRINVKL--KTGQETEINA--PGP--HITSTQFEQLLQQIKNTTSEDIVIVAG 133 (306)
T ss_dssp HHHHHHHHHHHHTTCEECCEECSSC--CEEEEEE--ESSSEEEEEC--CCC--CCCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred cchHHHHHHHHHCCCceeEEEcCCC--CeEEEEE--cCCCEEEEEC--CCC--CCCHHHHHHHHHHHHhccCCCEEEEeC
Confidence 7999999999999999999877543 5556554 4788765544 333 245554432 11 57899999876
Q ss_pred ccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHhcccCCCCCcH---H
Q 015777 214 ISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISFLTQGEDPYD---D 289 (400)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~~l~~~~~~~~---~ 289 (400)
.... ..+.+...++++.++++|+++++||+. . .+.++++ ++|++++|++|++.|++....+. .
T Consensus 134 ~~~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~--------~----~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 200 (306)
T 2jg5_A 134 SVPS-SIPSDAYAQIAQITAQTGAKLVVDAEK--------E----LAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVI 200 (306)
T ss_dssp CCCT-TSCTTHHHHHHHHHHHHCCEEEEECCH--------H----HHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHH
T ss_pred CCCC-CCChHHHHHHHHHHHHCCCEEEEECCh--------H----HHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHH
Confidence 5332 223457778889999999999999862 2 2444566 69999999999999998764332 3
Q ss_pred HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHH
Q 015777 290 AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 290 ~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++.+++.|++.|+||+|++|++++++++.+++|+++++++|||||||+|.|||+++|++|++ +++|+++|+
T Consensus 201 ~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~-------~~~a~~~A~ 273 (306)
T 2jg5_A 201 KYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLS-------IEKAFQQAV 273 (306)
T ss_dssp HHHHHHHHTTCSCEEEECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCC-------HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCC-------HHHHHHHHH
Confidence 4567788899999999999999999988888899999999999999999999999999999999 999999999
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHhCC
Q 015777 370 ACGALTVMERGAIPALPTREAVLNAIHAP 398 (400)
Q Consensus 370 a~Aa~~v~~~G~~~~~p~~~~l~~~l~~~ 398 (400)
++|++++++.| +|++++++++++++
T Consensus 274 a~aa~~v~~~G----~~~~~ev~~~~~~~ 298 (306)
T 2jg5_A 274 ACGTATAFDED----LATRDAIEKIKSQV 298 (306)
T ss_dssp HHHHHHHTSSS----SCCHHHHHHHHTTC
T ss_pred HHHHHHHcCCC----CCCHHHHHHHHhce
Confidence 99999999999 58999999998775
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=4.1e-38 Score=301.90 Aligned_cols=278 Identities=18% Similarity=0.118 Sum_probs=217.0
Q ss_pred CcEEEEccceeecccCcCCCCccCCCCceecCCChHHHHHHHHHHcCCCceeeecccccccccceeeeccCCCcCCCChH
Q 015777 61 PLVVCFGEMLIDFVPTVSGLSLAESPAFKKAPGGAPANVAVGIARLGGSSAFIGKTTLFCFYEHVKVIILPCPKVGADEF 140 (400)
Q Consensus 61 ~~v~viG~~~vD~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~larLG~~~~~i~~~~~~~~~~~~~~~~~~~~~vG~D~~ 140 (400)
-.|.++|....|.+.+.. .+...+||++.|+|++|+|||.++.++|. +|+|.
T Consensus 12 ~~~~~~~~~~~~~~~~~~--------~~~~~~GG~~~NvA~~la~LG~~~~~i~~-------------------vG~D~- 63 (298)
T 1vk4_A 12 HMITFIGHVSKDVNVVDG--------KREIAYGGGVVMGAITSSLLGVKTKVITK-------------------CTRED- 63 (298)
T ss_dssp SEEEEECCCEEEEEEETT--------EEEEEEECHHHHHHHHHHHTTCEEEEEEE-------------------ECTTT-
T ss_pred eeEEEeccccCceEeecC--------eEEEecCCHHHHHHHHHHHcCCceEEEEE-------------------EcCCH-
Confidence 358999999999887643 45788999999999999999999999999 99997
Q ss_pred HHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCch
Q 015777 141 GYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEP 220 (400)
Q Consensus 141 g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~ 220 (400)
+.+++.|+++||+++++.. +.+|+++.++ +++|++++..+.. +...+++++++. ..++++|++++... +.
T Consensus 64 -~~~~~~L~~~gVd~~~v~~--~~~t~~~~i~-~~~g~~~~~~~~~--~~~~l~~~~~~~---~~~~~v~~~~~~~~-~~ 133 (298)
T 1vk4_A 64 -VSKFSFLRDNGVEVVFLKS--PRTTSIENRY-GSDPDTRESFLIS--AADPFTESDLAF---IEGEAVHINPLWYG-EF 133 (298)
T ss_dssp -GGGGTTTGGGTCEEEEEEC--SSCEEEEEEC------CCEEEEEE--CCCCCCGGGGGG---CCSSEEEECCSSTT-SS
T ss_pred -HHHHHHHHHcCCceEEEec--CCCcEEEEEE-cCCCCeeEEEecc--ccccCCHHHcCc---CCCCEEEECCcccc-cc
Confidence 7889999999999998754 3466666655 5578887766533 334566666542 67999999887432 22
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCC-CCCCCCh--HHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLR-LPLWPSA--DKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~-~~~~~~~--~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
..++++.++++|+++++|++.. ..+|... ....+.+.++++++|++++|++|++.|++.. +.+++++.+.+
T Consensus 134 ----~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~--~~~~~~~~l~~ 207 (298)
T 1vk4_A 134 ----PEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTN--DLRESCRIIRS 207 (298)
T ss_dssp ----CGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSCS--CHHHHHHHHHH
T ss_pred ----cHHHHHHHHHcCCEEEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCCC--CHHHHHHHHHh
Confidence 2355667788899999999621 0001000 0001235567889999999999999999875 34567788889
Q ss_pred CCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc-CCccccchHHHHHHHHHHHHHHHHHh
Q 015777 298 ANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST-DFSLLQKEDQLRDALRFANACGALTV 376 (400)
Q Consensus 298 ~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~-g~~~~~~~~~l~~al~~A~a~Aa~~v 376 (400)
.|++.|+||+ ++|++++.+ +.+++|+++++++|||||||+|.|||+++|++ |++ +++|+++|+++|++++
T Consensus 208 ~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~-------~~~a~~~A~a~aa~~v 278 (298)
T 1vk4_A 208 FGAKIILATH-ASGVIVFDG-NFYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMS-------IEKATKFAAAVTSVKM 278 (298)
T ss_dssp TTCSSEEEEE-TTEEEEESS-SEEEEECCCSSGGGGTTHHHHHHHHHHHHHHTSCCC-------HHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEEc-CCCcEEEeC-CEEEeccCCcccCCCcCccHHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHHHHH
Confidence 9999999999 999999887 78899999999999999999999999999999 999 9999999999999999
Q ss_pred cccCCCCCCCCHHHHH
Q 015777 377 MERGAIPALPTREAVL 392 (400)
Q Consensus 377 ~~~G~~~~~p~~~~l~ 392 (400)
++.|+.+. |+++++.
T Consensus 279 ~~~G~~~~-~~~~el~ 293 (298)
T 1vk4_A 279 RHPGPLRR-EDLEAIS 293 (298)
T ss_dssp TSSSSCCG-GGGGGCC
T ss_pred ccCCCCCC-CCHHHHh
Confidence 99998765 6776654
No 51
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.92 E-value=4.5e-25 Score=209.54 Aligned_cols=216 Identities=17% Similarity=0.125 Sum_probs=159.9
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceecCCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch------h--hcCCc
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL------S--LITKA 206 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~------~--~i~~~ 206 (400)
+|.| ..+..|++.||++.++.. . +..+.+|.+.+.. ..++.+++.. + .++++
T Consensus 30 ~G~d----~~~~~l~~~Gv~~~~v~t--------~-i~~~~~g~~~~~g-------~~~~~~~~~~~~~~l~~~~~~~~~ 89 (283)
T 2ddm_A 30 VGNS----IAVPAIKQNGLNVFAVPT--------V-LLSNTPHYDTFYG-------GAIPDEWFSGYLRALQERDALRQL 89 (283)
T ss_dssp STHH----HHHHHHHHTTCCEEEEEE--------E-EESSCTTSSCCCE-------EECCHHHHHHHHHHHHHTTCCTTC
T ss_pred chHH----HHHHHHHHcCCeeeEEeE--------E-EeccCCCcCceee-------eeCCHHHHHHHHHHHHhcCCcccC
Confidence 8886 356789999999887642 1 2224556554211 1233333321 1 46688
Q ss_pred cEEEEccccccCchhHHHHHHHHHHHhh--CCCeEEEeCCCCC---CCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 207 KIFHYGSISLITEPCKSAHIAAAKAAKD--AGVVLSYDPNLRL---PLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 207 ~~v~~~~~~~~~~~~~~~~~~~~~~a~~--~g~~v~~D~~~~~---~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
++++++.+.. ....+.+.++++.+++ .|+++++||+++. ..|.+.+.......++++++|++++|++|++.|+
T Consensus 90 ~~v~~G~l~~--~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~ 167 (283)
T 2ddm_A 90 RAVTTGYMGT--ASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILT 167 (283)
T ss_dssp CEEEECCCSC--HHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHH
T ss_pred CEEEECCcCC--HHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHh
Confidence 9999987543 2345677788888887 7899999998764 4554332233333457899999999999999999
Q ss_pred CCCCCc---HHHHHHHHHhCCCcEEEEEecCC-------cEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcC
Q 015777 282 QGEDPY---DDAVVYKLFHANLKLLLVTEGPD-------GCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTD 351 (400)
Q Consensus 282 ~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~-------G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g 351 (400)
|....+ ..+.++++.+.|++.|+||.|++ |++++++++.+++++++++ +||+||||+|.|+|++++++|
T Consensus 168 g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~g 246 (283)
T 2ddm_A 168 GKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQLISGLLKG 246 (283)
T ss_dssp TSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHHHHHHHHcC
Confidence 976433 23456778888999999999999 8999888888889988886 899999999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhcccC
Q 015777 352 FSLLQKEDQLRDALRFANACGALTVMERG 380 (400)
Q Consensus 352 ~~~~~~~~~l~~al~~A~a~Aa~~v~~~G 380 (400)
++ +++|+++|+++++.++++..
T Consensus 247 ~~-------~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 247 KA-------LTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp CC-------HHHHHHHHHHHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHHHH
Confidence 99 99999999999999998753
No 52
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.92 E-value=4e-25 Score=212.89 Aligned_cols=211 Identities=17% Similarity=0.100 Sum_probs=154.8
Q ss_pred CCCChHHHHHHHHHHHCCCCCCCceec--CCCCceEEEEEEcCCCCeeEEEecCCCccccCCccccch--hh-----cCC
Q 015777 135 VGADEFGYMLADILKENNVNGAGMRFD--PGARTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDL--SL-----ITK 205 (400)
Q Consensus 135 vG~D~~g~~i~~~L~~~gV~~~~v~~~--~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~--~~-----i~~ 205 (400)
+|+|. |+++ |+++||+++++... .+ +|++.+ + .+ ..+++++++. +. +++
T Consensus 19 vG~D~-g~~i---L~~~GV~~~~v~~~~~~~-~t~~~~-------------~--~g--~~l~~~~i~~~~~~~~~~~~~~ 76 (312)
T 2yxt_A 19 VGNRA-ATFP---LQVLGFEIDAVNSVQFSN-HTGYAH-------------W--KG--QVLNSDELQELYEGLRLNNMNK 76 (312)
T ss_dssp STHHH-HHHH---HHHTTCEEEEEEEEEESS-CTTSSC-------------C--CE--EECCHHHHHHHHHHHHHTTCCC
T ss_pred cchHh-hHHH---HHHcCCeEEEEEEEEecC-CCCcCC-------------c--cC--ccCCHHHHHHHHHHHHhcCCcc
Confidence 99998 9998 99999999887653 21 232111 1 11 1244444431 11 678
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCC--eEEEeCCCCCC------CCCChHHHHHhHHh-hhccCcEEEcCHhH
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGV--VLSYDPNLRLP------LWPSADKAREGILS-IWETADIIKISEEE 276 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~--~v~~D~~~~~~------~~~~~~~~~~~~~~-ll~~~dvl~~N~~E 276 (400)
+++++++.+. .+...+.+.++++.++++|. ++++||+.+.. +|.. +.+.+.+.+ +++++|++++|++|
T Consensus 77 ~~~v~~G~~~--~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~-~~~~~~l~~~ll~~~dil~pN~~E 153 (312)
T 2yxt_A 77 YDYVLTGYTR--DKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVP-EDLLPVYKEKVVPLADIITPNQFE 153 (312)
T ss_dssp CSEEEECCCC--CHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSC-TTHHHHHHHTTGGGCSEECCCHHH
T ss_pred CCEEEECCCC--CHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCC-HHHHHHHHHHhhhhCCEEcCCHHH
Confidence 9998876543 22335666688888888875 48999987643 3432 234556664 89999999999999
Q ss_pred HhcccCCCCCc---HHHHHHHHHhCCCcEEEEEecCC------cEEEE-------eC-C----ceEEEccccccccCCCC
Q 015777 277 ISFLTQGEDPY---DDAVVYKLFHANLKLLLVTEGPD------GCRYY-------TK-D----FSGRVQGLKVEAVDATG 335 (400)
Q Consensus 277 ~~~l~~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~------G~~~~-------~~-~----~~~~vpa~~v~vvDttG 335 (400)
++.|+|....+ ..++++++++.|++.|+||.|+. |++++ ++ + +.+++|++++++ ||||
T Consensus 154 a~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-dttG 232 (312)
T 2yxt_A 154 AELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKVDA-VFVG 232 (312)
T ss_dssp HHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECCSS-CCSS
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeecccCC-CCCC
Confidence 99999975433 24556778888999999998886 47765 44 2 567889888887 9999
Q ss_pred chHHHHHHHHHHHHc-CCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 336 AGDAFVAGILSQLST-DFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 336 AGDaF~Agfl~~l~~-g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|||+|.|+|+++|++ |++ +++|+++|+++++.+++.
T Consensus 233 AGDaf~a~~~~~l~~~g~~-------l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 233 TGDLFAAMLLAWTHKHPNN-------LKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp HHHHHHHHHHHHHHHSTTC-------HHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999 999 999999999999888764
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.87 E-value=8.7e-22 Score=187.49 Aligned_cols=160 Identities=16% Similarity=0.116 Sum_probs=125.0
Q ss_pred ccEEEEccccccCchhHHHHHHHHHHHhhCCCe-EEEeCCCCC----CCCCChHHHHHhHHh-hhccCcEEEcCHhHHhc
Q 015777 206 AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVV-LSYDPNLRL----PLWPSADKAREGILS-IWETADIIKISEEEISF 279 (400)
Q Consensus 206 ~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~-v~~D~~~~~----~~~~~~~~~~~~~~~-ll~~~dvl~~N~~E~~~ 279 (400)
+|+++++.+. +.+....+++.+++.+++ +++||+.+. .+|. +...+.+.+ +++++|++++|+.|++.
T Consensus 95 ~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~--~~~~~~l~~~ll~~~dil~pN~~Ea~~ 167 (288)
T 1jxh_A 95 IDTTKIGMLA-----ETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLS--PSAIETLRVRLLPQVSLITPNLPEAAA 167 (288)
T ss_dssp CSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEEECCCC------CCC--HHHHHHHHHHTGGGCSEEECBHHHHHH
T ss_pred CCEEEECCCC-----CHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCC--HHHHHHHHHHHHhhCcEEcCCHHHHHH
Confidence 6888877532 356778888999999986 999998764 2342 223344543 78899999999999999
Q ss_pred ccCC-CCCc---HHHHHHHHHhCCCcEEEEEecCCc-----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 280 LTQG-EDPY---DDAVVYKLFHANLKLLLVTEGPDG-----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 280 l~~~-~~~~---~~~~~~~l~~~g~~~vvvT~G~~G-----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
|++. ...+ ..++++++.+.|++.|+||.|.+| ++++++++.+++++++++++||+||||+|.|+|+++|++
T Consensus 168 L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~ 247 (288)
T 1jxh_A 168 LLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPR 247 (288)
T ss_dssp HHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGG
T ss_pred HcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHc
Confidence 9987 4433 234567888899999999999999 888887778889998899999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
|.+ +++|+++|+++++.+++..
T Consensus 248 g~~-------~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 248 HRS-------WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp SSS-------HHHHHHHHHHHHHHHHTTG
T ss_pred CCC-------HHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999999776
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.87 E-value=6.8e-22 Score=184.91 Aligned_cols=161 Identities=19% Similarity=0.154 Sum_probs=127.4
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCC-CeEEEeCCCCCC----CCCChHHHHHhH-HhhhccCcEEEcCHhHHh
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAG-VVLSYDPNLRLP----LWPSADKAREGI-LSIWETADIIKISEEEIS 278 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g-~~v~~D~~~~~~----~~~~~~~~~~~~-~~ll~~~dvl~~N~~E~~ 278 (400)
+.+.++++.+. +.+....+++.+++.+ +++++||+++.. +|. +...+.+ .++++++|++++|+.|++
T Consensus 70 ~~~~v~~G~l~-----~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~--~~~~~~~~~~ll~~~dil~pN~~E~~ 142 (258)
T 1ub0_A 70 PLHAAKTGALG-----DAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLA--KEAAAALKERLFPLADLVTPNRLEAE 142 (258)
T ss_dssp CCSEEEECCCC-----SHHHHHHHHHHHHHTTCCSEEECCCC---------C--HHHHHHHHHHTGGGCSEECCBHHHHH
T ss_pred CCCEEEECCcC-----CHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccC--hHHHHHHHHhhcccCeEEeCCHHHHH
Confidence 46788777532 3456777888888888 899999987643 343 1222344 457889999999999999
Q ss_pred cccCCCCCcH---HHHHHHHHhCCCcEEEEEecCC-c----EEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 279 FLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPD-G----CRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 279 ~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~-G----~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
.|+|....+. .+.++++.+.|++.|++|.|++ | ++++++++.+++++++++++||+||||+|.|+|++++++
T Consensus 143 ~L~g~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 222 (258)
T 1ub0_A 143 ALLGRPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAK 222 (258)
T ss_dssp HHHCSCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9999764332 3456778888999999999998 9 788888888889999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
|++ +++|+++|+++++.++++.
T Consensus 223 g~~-------~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 223 GRP-------LAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999988753
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.85 E-value=8.3e-21 Score=178.86 Aligned_cols=163 Identities=16% Similarity=0.132 Sum_probs=133.0
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCC-eEEEeCCCCCCCCCC--hHHHHHhHH-hhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGV-VLSYDPNLRLPLWPS--ADKAREGIL-SIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~-~v~~D~~~~~~~~~~--~~~~~~~~~-~ll~~~dvl~~N~~E~~~l 280 (400)
+.|.++++.+. . .+....+++.+++.+. ++++||+.+...|.. .+...+.+. ++++++|++++|+.|++.|
T Consensus 74 ~~d~v~~G~l~--~---~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L 148 (271)
T 2i5b_A 74 GVDAMKTGMLP--T---VDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQL 148 (271)
T ss_dssp CCSEEEECCCC--S---HHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCCC--C---HHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHH
Confidence 67888887542 1 4677788888888898 699999887655432 122334554 6789999999999999999
Q ss_pred cCCC-CCc---HHHHHHHHHhCCCcEEEEEecC--CcE----EEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQGE-DPY---DDAVVYKLFHANLKLLLVTEGP--DGC----RYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~~-~~~---~~~~~~~l~~~g~~~vvvT~G~--~G~----~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|.. ..+ ..+.++++.+.|++.|++|.|. +|+ +++++++.+++++++++++||+||||+|.|+|++++++
T Consensus 149 ~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~ 228 (271)
T 2i5b_A 149 SGMDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAK 228 (271)
T ss_dssp HTCCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHc
Confidence 9976 332 2345678888899999999999 784 67777778889999999999999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhccc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVMER 379 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~~ 379 (400)
|++ +++|+++|+++++.+++..
T Consensus 229 g~~-------~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 229 GAE-------VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHTC
T ss_pred CCC-------HHHHHHHHHHHHHHHHHHh
Confidence 999 9999999999999999874
No 56
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.81 E-value=5.8e-19 Score=168.22 Aligned_cols=164 Identities=16% Similarity=0.106 Sum_probs=130.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCC--CCC-ChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLP--LWP-SADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~--~~~-~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
+.|.+.+|-+ ......+.+.++++.+++.++++++||+.+.. +|. ..+...+.++++++++|+++||+.|++.|+
T Consensus 77 ~~~aik~G~l--~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~ 154 (291)
T 3mbh_A 77 QFDAIYTGYL--GSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLL 154 (291)
T ss_dssp CCSEEEECCC--SSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHH
T ss_pred ccCEEEECCC--CCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHh
Confidence 5788887643 23344567777777776678999999988754 454 235556677889999999999999999999
Q ss_pred CCCCC------cHHHHHHHHHhCCCcEEEEEecC-------CcEEEEeCC--ceEEEccccccccCCCCchHHHHHHHHH
Q 015777 282 QGEDP------YDDAVVYKLFHANLKLLLVTEGP-------DGCRYYTKD--FSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 282 ~~~~~------~~~~~~~~l~~~g~~~vvvT~G~-------~G~~~~~~~--~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
|.... +.++++++++++|++.|+||.|. .|+++++++ +.++++.+++. +|++|+||+|.|+|++
T Consensus 155 g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a 233 (291)
T 3mbh_A 155 DEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITG 233 (291)
T ss_dssp TCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHH
Confidence 98642 23456788889999999999654 577888763 45677877775 8999999999999999
Q ss_pred HHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 347 QLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 347 ~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+|++|.+ +++|+++|+++++.++..
T Consensus 234 ~l~~g~~-------l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 234 SLMQGDS-------LPMALDRATQFILQGIRA 258 (291)
T ss_dssp HHHTTCC-------HHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCC-------HHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999998888765
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.80 E-value=9.5e-19 Score=165.96 Aligned_cols=161 Identities=17% Similarity=0.172 Sum_probs=127.5
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhh-CCCeEEEeCCCCC--CCCC-ChHHHHHhHHhhhccCcEEEcCHhHHhcc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKD-AGVVLSYDPNLRL--PLWP-SADKAREGILSIWETADIIKISEEEISFL 280 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~-~g~~v~~D~~~~~--~~~~-~~~~~~~~~~~ll~~~dvl~~N~~E~~~l 280 (400)
+.|.+.+|.+. . .+....+.+..++ .+.++++||+.+. .+|. ..+...+.++++++++|+++||+.|++.|
T Consensus 74 ~~daik~G~l~--s---~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L 148 (282)
T 3h74_A 74 HFDQALIGYVG--S---VALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALL 148 (282)
T ss_dssp CCSEEEECCCC--S---HHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHH
T ss_pred ccCEEEECCCC--C---HHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHH
Confidence 67888887542 2 3334444444444 4689999998874 3454 24555667778999999999999999999
Q ss_pred cCCCCC---cHHHHHHHHHh-CCC-cEEEEEecC----CcEEEEe-CCceEEEccccccccCCCCchHHHHHHHHHHHHc
Q 015777 281 TQGEDP---YDDAVVYKLFH-ANL-KLLLVTEGP----DGCRYYT-KDFSGRVQGLKVEAVDATGAGDAFVAGILSQLST 350 (400)
Q Consensus 281 ~~~~~~---~~~~~~~~l~~-~g~-~~vvvT~G~----~G~~~~~-~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~ 350 (400)
+|.... +.+++++++.+ .|+ +.|+||.|. .|+++++ +++.++++.+++. +|++|+||+|.|+|+++|++
T Consensus 149 ~g~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~ 227 (282)
T 3h74_A 149 TGAPYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGR 227 (282)
T ss_dssp HTCCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHT
T ss_pred hCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHC
Confidence 997642 44667788888 899 999999995 7888885 6667788887775 89999999999999999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 351 DFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 351 g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|++ +++|+++|+++++.+++.
T Consensus 228 g~~-------l~~A~~~A~~~~~~ai~~ 248 (282)
T 3h74_A 228 GYP-------LAPTLARANQWLNMAVAE 248 (282)
T ss_dssp TCC-------HHHHHHHHHHHHHHHHHH
T ss_pred CCC-------HHHHHHHHHHHHHHHHHH
Confidence 999 999999999998888865
No 58
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.79 E-value=8.6e-19 Score=166.87 Aligned_cols=165 Identities=19% Similarity=0.106 Sum_probs=130.3
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhhCC--CeEEEeCCCCC----CCCCChHHHHHhHHh-hhccCcEEEcCHh
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG--VVLSYDPNLRL----PLWPSADKAREGILS-IWETADIIKISEE 275 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g--~~v~~D~~~~~----~~~~~~~~~~~~~~~-ll~~~dvl~~N~~ 275 (400)
+.+.|++..|.+ ......+.+.++++.+++++ +++++||..+. .+|. +...+.+++ +++++|+++||+.
T Consensus 75 l~~~d~v~~G~l--~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~--~~~~~~l~~~ll~~~diitpN~~ 150 (289)
T 3pzs_A 75 LKDCDAVLSGYI--GSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVA--PGVAEFFCNEALPASDMIAPNLL 150 (289)
T ss_dssp GGGCCEEEECCC--SSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSC--HHHHHHHHHTHHHHCSEECCCHH
T ss_pred ccCCCEEEECCC--CCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccC--HHHHHHHHHHhhccCCEEeCCHH
Confidence 357888877654 34445677788888888766 89999985432 2332 344555554 7899999999999
Q ss_pred HHhcccCCCCCcH---HHHHHHHHhCCCcEEEEEec-CCcE-------EEEeCCceEEEccccccc--cCCCCchHHHHH
Q 015777 276 EISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEG-PDGC-------RYYTKDFSGRVQGLKVEA--VDATGAGDAFVA 342 (400)
Q Consensus 276 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G-~~G~-------~~~~~~~~~~vpa~~v~v--vDttGAGDaF~A 342 (400)
|++.|+|....+. .++++++.++|++.|+||.| .+|+ +++++++.++++.+++++ +|++||||+|.|
T Consensus 151 E~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dt~GaGD~f~a 230 (289)
T 3pzs_A 151 ELEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDFGKRQPVGVGDLTSG 230 (289)
T ss_dssp HHHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCCTTSCCTTHHHHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecCCCCCCCcHHHHHHH
Confidence 9999999875433 34567888899999999985 5787 777777788888887776 999999999999
Q ss_pred HHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 343 GILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 343 gfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
+|++++++|.+ +++|+++|+++++..+..
T Consensus 231 ~~~~~l~~g~~-------~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 231 LLLVNLLKGEP-------LDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHHTTCC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCC-------HHHHHHHHHHHHHHHHHH
Confidence 99999999999 999999999987777664
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.75 E-value=2.4e-17 Score=157.64 Aligned_cols=163 Identities=14% Similarity=0.058 Sum_probs=120.7
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhCC------CeEEEeCCCCCC--CCCChHHHHHhHHhhhccCcEEEcCHh
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDAG------VVLSYDPNLRLP--LWPSADKAREGILSIWETADIIKISEE 275 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g------~~v~~D~~~~~~--~~~~~~~~~~~~~~ll~~~dvl~~N~~ 275 (400)
.++|.+..|.+. .....+.+.++++..++.+ .++++||..+.. +|. .+...+.++++++++|+++||..
T Consensus 75 ~~~daV~tG~l~--s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~-~~~~~~~~~~Ll~~adiitPN~~ 151 (300)
T 3zs7_A 75 SNYRYILTGYIN--NVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYC-KKEVLDAYRELVPLADIVTPNYF 151 (300)
T ss_dssp GGCSEEEECCCC--CHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC----------CTHHHHHHHHGGGCSEECCCHH
T ss_pred ccCCEEEECCCC--CHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeec-CHHHHHHHHHHhhhCCEecCCHH
Confidence 468888776542 3334566667777776654 799999976543 554 34455667779999999999999
Q ss_pred HHhcccCCCCCcH---HHHHHHHHhCCCcEEEEEecCCc-------EEEEeC------CceEEEccccccccCCCCchHH
Q 015777 276 EISFLTQGEDPYD---DAVVYKLFHANLKLLLVTEGPDG-------CRYYTK------DFSGRVQGLKVEAVDATGAGDA 339 (400)
Q Consensus 276 E~~~l~~~~~~~~---~~~~~~l~~~g~~~vvvT~G~~G-------~~~~~~------~~~~~vpa~~v~vvDttGAGDa 339 (400)
|++.|+|.+..+. .+++++|+++|++.|+||.|..| +++..+ ++.++++.++++. |++|+||+
T Consensus 152 Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~GtGD~ 230 (300)
T 3zs7_A 152 EASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYHEG-RYTGTGDV 230 (300)
T ss_dssp HHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECCSS-CBTTHHHH
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccCCC-CCcCHHHH
Confidence 9999999875443 34567888899999999999988 333334 4667788887776 89999999
Q ss_pred HHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHHHhcc
Q 015777 340 FVAGILSQLSTDFSLLQKEDQLRDALRFANACGALTVME 378 (400)
Q Consensus 340 F~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~v~~ 378 (400)
|.|+|+++| +|.+ +++|+++|+++....+..
T Consensus 231 fsaal~a~l-~g~~-------~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 231 FAACLLAFS-HSHP-------MDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp HHHHHHHHH-TTSC-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCC-------HHHHHHHHHHHHHHHHHH
Confidence 999999999 9999 999999999996666543
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.58 E-value=2.8e-14 Score=134.44 Aligned_cols=163 Identities=15% Similarity=0.014 Sum_probs=112.8
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~dvl~~N~~E~~ 278 (400)
+.++.++.+++..-. ..+...+.+.++++.+++.++++++||..... . ....+...++++ ++|+++||..|++
T Consensus 54 ~~~~~a~~lvi~~G~-~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~---~-~~~~~~~~~ll~~~~~~vitPN~~E~~ 128 (272)
T 1ekq_A 54 DMAKIAGALVLNIGT-LSKESVEAMIIAGKSANEHGVPVILDPVGAGA---T-PFRTESARDIIREVRLAAIRGNAAEIA 128 (272)
T ss_dssp HHHHHSSEEEEECTT-CCHHHHHHHHHHHHHHHHTTCCEEEECTTBTT---B-HHHHHHHHHHHHHSCCSEEEECHHHHH
T ss_pred HHHHhCCEEEEECCC-CCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCc---c-cchHHHHHHHHccCCCeEECCCHHHHH
Confidence 455678887763322 23334567778888888999999999964211 1 111233345666 8999999999999
Q ss_pred cccCCC-C--------Cc---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHH
Q 015777 279 FLTQGE-D--------PY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILS 346 (400)
Q Consensus 279 ~l~~~~-~--------~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~ 346 (400)
.|+|.. . .+ ..+.++++.+++...|++| |..+ +++++++.++++.....+.|++|+||+|.|.+.+
T Consensus 129 ~L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa 206 (272)
T 1ekq_A 129 HTVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGA 206 (272)
T ss_dssp HHCC---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHH
T ss_pred HHhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHH
Confidence 999875 3 11 2345566766654555555 9887 5556667788887777788999999999888888
Q ss_pred HHHcCCccccchHHHHHHHHHHHH----HHHHHhc
Q 015777 347 QLSTDFSLLQKEDQLRDALRFANA----CGALTVM 377 (400)
Q Consensus 347 ~l~~g~~~~~~~~~l~~al~~A~a----~Aa~~v~ 377 (400)
.+.+|.+ +.+|+++|+. ++.....
T Consensus 207 ~la~g~~-------~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 207 FCAVEEN-------PLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHTTCSS-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCC-------HHHHHHHHHHHHHHHHHHHHh
Confidence 8888999 9999999986 5544444
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.55 E-value=4.9e-14 Score=145.33 Aligned_cols=159 Identities=18% Similarity=0.080 Sum_probs=117.1
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCC----CCCCChHHHHHhHH-hhhccCcEEEcCHhHHhc
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRL----PLWPSADKAREGIL-SIWETADIIKISEEEISF 279 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~~~-~ll~~~dvl~~N~~E~~~ 279 (400)
+.|.|.+|.+ .....+.+.++++..++.+.++++||+.+. .++. +...+.+. ++++.+|+|+||..|++.
T Consensus 91 ~~daIkiG~l---s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~--~~~~~~l~~~Ll~~a~iitPN~~Ea~~ 165 (550)
T 3rm5_A 91 KCNVIKTGML---TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAG--KDIVSLITEKVAPFADILTPNIPECYK 165 (550)
T ss_dssp CCSEEEECSC---CHHHHHHHHHHHHHHGGGSCEEEECCCC---------C--TTHHHHHHHHTGGGCSEECCBHHHHHH
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCC--HHHHHHHHHHhhCcceEEecCHHHHHH
Confidence 6788888754 444455666777766666899999997642 2221 22334444 688999999999999999
Q ss_pred ccCCC--CC---cHHHHHHHHHhCCC-cEEEEEecCCc--------E--EEE--eCCceEEEccccccccCCCCchHHHH
Q 015777 280 LTQGE--DP---YDDAVVYKLFHANL-KLLLVTEGPDG--------C--RYY--TKDFSGRVQGLKVEAVDATGAGDAFV 341 (400)
Q Consensus 280 l~~~~--~~---~~~~~~~~l~~~g~-~~vvvT~G~~G--------~--~~~--~~~~~~~vpa~~v~vvDttGAGDaF~ 341 (400)
|+|.. .. +..++++++.++|. +.|+||.|..+ + +++ .+++.++++.++++.+|++|+||+|.
T Consensus 166 L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v~~~~t~GtGD~fs 245 (550)
T 3rm5_A 166 LLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFVNTTHTHGTGCTLA 245 (550)
T ss_dssp HHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECCCCSCCBTHHHHHH
T ss_pred HhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCcCCCCCcChhHHHH
Confidence 99974 22 23456678888876 89999998863 3 455 34566778888888899999999999
Q ss_pred HHHHHHHHcCCccccchHHHHHHHHHHHHHHHHH
Q 015777 342 AGILSQLSTDFSLLQKEDQLRDALRFANACGALT 375 (400)
Q Consensus 342 Agfl~~l~~g~~~~~~~~~l~~al~~A~a~Aa~~ 375 (400)
|+|++.|++|.+ +++|+++|+..-...
T Consensus 246 aaiaa~La~G~~-------l~eAv~~A~~~v~~a 272 (550)
T 3rm5_A 246 SAIASNLARGYS-------LPQSVYGGIEYVQNA 272 (550)
T ss_dssp HHHHHHHHTTCC-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-------HHHHHHHHHHHHHHH
Confidence 999999999999 999999999643333
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.18 E-value=1.6e-10 Score=108.12 Aligned_cols=146 Identities=16% Similarity=0.031 Sum_probs=99.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc-cCcEEEcCHhHHhc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE-TADIIKISEEEISF 279 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~-~~dvl~~N~~E~~~ 279 (400)
+.++.+|.+.++.- +..+...+.+..+++.+++.++++++||..... .. ...+...++++ .+++++||..|+..
T Consensus 52 ~~~~~~dalvi~~G-~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~---~~-~~~~~~~~ll~~~~~vITPN~~E~~~ 126 (265)
T 1v8a_A 52 EMIRLADAVVINIG-TLDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TK-FRTRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECT-TCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BH-HHHHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCEEEEEEC-CCCHHHHHHHHHHHHHHHHcCCcEEEcCccccc---cc-cCHHHHHHHHHhCCcEEcCCHHHHHH
Confidence 55677888887532 223323345667778888899999999964221 11 11222333443 39999999999999
Q ss_pred ccCCCC------------CcHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 280 LTQGED------------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 280 l~~~~~------------~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
|+|... .+..+.++++.+++...|++| |..+. ++++++.++++.......+++|+||+|.|.+.+.
T Consensus 127 L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCCcCcCCccChhHHHHHHHHHH
Confidence 988542 112345667776665667777 87764 4566667777766555679999999999999999
Q ss_pred HHcCCc
Q 015777 348 LSTDFS 353 (400)
Q Consensus 348 l~~g~~ 353 (400)
+.+|.+
T Consensus 205 lA~g~~ 210 (265)
T 1v8a_A 205 VAVTEP 210 (265)
T ss_dssp HTTSCH
T ss_pred HhcCCC
Confidence 999874
No 63
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.01 E-value=2.4e-09 Score=102.40 Aligned_cols=172 Identities=13% Similarity=0.087 Sum_probs=104.4
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhh-h-ccCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSI-W-ETADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l-l-~~~dvl~~N~~E~~ 278 (400)
+.++..|.+.++.-....+...+.+.++++..+ .++++++|+. ...+...-.++ + +.+++|+||..|++
T Consensus 121 ~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~l~L~~~~~viTPN~~E~~ 191 (311)
T 3bgk_A 121 EQITAADVVLMGPGLAEDDLAQTTFDVVWQAIE-PKQTLIIDGS--------AINLLAKRKPAIWPTKQIILTPHQKEWE 191 (311)
T ss_dssp HHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTSEEEEETH--------HHHHHHHCC-CCCSCSCEEEECCSCC-C
T ss_pred HHhccCCEEEEcCCCCCCHHHHHHHHHHHHHcC-CCCeEEEeCC--------hhhhhccChhhcCCCCCEEECCcHHHHH
Confidence 344567888886311112222344555555443 5899999983 22222211111 3 47899999999999
Q ss_pred cccCCCCCcH-H----HHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHH-Hc-C
Q 015777 279 FLTQGEDPYD-D----AVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQL-ST-D 351 (400)
Q Consensus 279 ~l~~~~~~~~-~----~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l-~~-g 351 (400)
.|+|....+. + +.++++.+ + .+|+..| .+.++++ ++.+++.....+..+++|+||+| +|+++++ .+ |
T Consensus 192 ~L~g~~~~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~L-ag~iaa~lA~~g 265 (311)
T 3bgk_A 192 RLSGLTIPEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTL-AGMIAGFVAQFH 265 (311)
T ss_dssp TTTCCCSTTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHH-HHHHHHHHHHCC
T ss_pred HHhCCCCCcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHH-HHHHHHHHHccC
Confidence 9999765432 2 23344444 3 3444445 5677777 44445556667788999999997 5566655 58 9
Q ss_pred CccccchHHHHHHHHHHHHHHHHHhcc---cCCCCCCCCHHHHHHHHhC
Q 015777 352 FSLLQKEDQLRDALRFANACGALTVME---RGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 352 ~~~~~~~~~l~~al~~A~a~Aa~~v~~---~G~~~~~p~~~~l~~~l~~ 397 (400)
.+ +.+|+++|+.+.+..-.. .| . + ....+|.+.|.+
T Consensus 266 ~~-------~~eA~~~A~~~~~~ag~~a~~~g-~-~-~~a~dl~~~l~~ 304 (311)
T 3bgk_A 266 TD-------RFEVAAAAVFLHSYIADQLSKEA-Y-V-VLPTRISAEITR 304 (311)
T ss_dssp SC-------HHHHHHHHHHHHHHHHHHHHTTC-S-S-CCHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHHHHHHHHHHHhhC-C-C-CCHHHHHHHHHH
Confidence 99 999999997766653321 24 2 3 367777776643
No 64
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.99 E-value=1.5e-08 Score=94.74 Aligned_cols=166 Identities=14% Similarity=-0.024 Sum_probs=110.7
Q ss_pred ccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcE
Q 015777 191 MLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADI 269 (400)
Q Consensus 191 ~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dv 269 (400)
|...++++. ++.+.++.++++.-. ..+...+.+..+++.+++.++|+++||..... +..+ .+...+++ ..+++
T Consensus 45 M~~~~~e~~-e~~~~a~alvIn~G~-l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~ga---s~~r-~~~~~~Ll~~~~~V 118 (273)
T 3dzv_A 45 MADDPREFP-QMFQQTSALVLNLGH-LSQEREQSLLAASDYARQVNKLTVVDLVGYGA---SDIR-NEVGEKLVHNQPTV 118 (273)
T ss_dssp CCCCGGGHH-HHHTTCSEEEEECCS-CCHHHHHHHHHHHHHHHHTTCCEEEECTTTTS---CHHH-HHHHHHHHHTCCSE
T ss_pred hcCCHHHHH-HHHHHCCeEEEecCC-CChHHHHHHHHHHHHHHHcCCcEEEchhhcCC---cccC-HHHHHHHHhcCCcE
Confidence 333444443 677788888876422 33333466777788899999999999964322 1111 12222222 37899
Q ss_pred EEcCHhHHhcccCCCCC-----------------cHHHHHHHHHhCCC-cEEEEEecCCcEEEEeCCceEEEcccccccc
Q 015777 270 IKISEEEISFLTQGEDP-----------------YDDAVVYKLFHANL-KLLLVTEGPDGCRYYTKDFSGRVQGLKVEAV 331 (400)
Q Consensus 270 l~~N~~E~~~l~~~~~~-----------------~~~~~~~~l~~~g~-~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vv 331 (400)
|++|..|+..|+|.... +..+.++++.++.. ..|++|-+. -+++++++.+.++.-....-
T Consensus 119 ItpN~~E~~~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~--D~i~dg~~~~~~~~G~~~~~ 196 (273)
T 3dzv_A 119 VKGNLSEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ--DVLVSQEQVIVLQNGVPELD 196 (273)
T ss_dssp EEEEHHHHHHHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS--EEEECSSCEEEECCCCGGGG
T ss_pred ECCCHHHHHHHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe--eEEEcCCEEEEeCCCCcccC
Confidence 99999999999986531 11234566766555 677777543 24555566667765544556
Q ss_pred CCCCchHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHH
Q 015777 332 DATGAGDAFVAGILSQLSTDFSLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 332 DttGAGDaF~Agfl~~l~~g~~~~~~~~~l~~al~~A~a~ 371 (400)
+++|.||++.|.+.+.+.+|.+ +.+|+..|...
T Consensus 197 ~v~GtGc~Ls~~Iaa~lA~g~~-------~~~Aa~~A~~~ 229 (273)
T 3dzv_A 197 CFTGTGDLVGALVAALLGEGNA-------PMTAAVAAVSY 229 (273)
T ss_dssp SSTTHHHHHHHHHHHHHHHTCC-------HHHHHHHHHHH
T ss_pred CcCCchHHHHHHHHHHHhCCCC-------HHHHHHHHHHH
Confidence 6799999999999999999999 88888877654
No 65
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.98 E-value=3.6e-09 Score=101.09 Aligned_cols=170 Identities=11% Similarity=-0.013 Sum_probs=102.5
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh--ccCcEEEcCHhHHh
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW--ETADIIKISEEEIS 278 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll--~~~dvl~~N~~E~~ 278 (400)
+.++.+|.+.++.-....+...+.+.++++..+ .++++++|+. ...+...-.+++ +.+++|+||..|++
T Consensus 107 ~~~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~~-~~~pvVlDa~--------g~~ll~~~~~~l~~~~~~viTPN~~E~~ 177 (310)
T 2r3b_A 107 NVVEQADVILIGPGLGLDATAQQILKMVLAQHQ-KQQWLIIDGS--------AITLFSQGNFSLTYPEKVVFTPHQMEWQ 177 (310)
T ss_dssp HHHHHCSEEEECTTCCSSHHHHHHHHHHHHHCC-TTCEEEEETH--------HHHHHHHTTCCCSSGGGEEEECCHHHHH
T ss_pred HHhccCCEEEEeCCCCCCHHHHHHHHHHHHhcC-CCCcEEEcCC--------cchhcccchhhhcCCCCEEEcCCHHHHH
Confidence 344567888876311112222344555555443 5899999983 222222101122 46889999999999
Q ss_pred cccCCCCCcH-----HHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHH-HcCC
Q 015777 279 FLTQGEDPYD-----DAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQL-STDF 352 (400)
Q Consensus 279 ~l~~~~~~~~-----~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l-~~g~ 352 (400)
.|+|....+. .++++++ ++ +|+..| .+.++++ ++..++.....+..+++|+||++ +|+++++ .+|.
T Consensus 178 ~L~g~~~~~~~~~~a~~aA~~l---g~--~VvlKG-~~~vi~~-~~~~~~~~~g~~~~~t~GtGD~L-ag~Iaa~lA~g~ 249 (310)
T 2r3b_A 178 RLSHLPIEQQTLANNQRQQAKL---GS--TIVLKS-HRTTIFH-AGEPFQNTGGNPGMATGGTGDTL-AGIIAGFLAQFK 249 (310)
T ss_dssp HHHCCCGGGCCHHHHHHHHHHH---TS--EEEECS-TTCEEEC-SSSCEECCCCCGGGCSTTHHHHH-HHHHHHHHHHSC
T ss_pred HHhCCCCCcccchHHHHHHHHh---Cc--EEEEeC-CceEEEE-CCEEEEECCCCCCCCCCChHHHH-HHHHHHHHHcCC
Confidence 9999764322 2333444 43 455555 5566666 43334555566778999999997 5555555 5899
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhc---ccCCCCCCCCHHHHHHHHhC
Q 015777 353 SLLQKEDQLRDALRFANACGALTVM---ERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~---~~G~~~~~p~~~~l~~~l~~ 397 (400)
+ +.+|+++|+.+.+..-. ..| .+ ....+|.+.|.+
T Consensus 250 ~-------~~eA~~~A~~~~~~ag~~a~~~g--~~-~~a~dl~~~l~~ 287 (310)
T 2r3b_A 250 P-------TIETIAGAVYLHSLIGDDLAKTD--YV-VLPTKISQALPT 287 (310)
T ss_dssp S-------SHHHHHHHHHHHHHHHHHHTTTC--SS-CCHHHHHHHHHH
T ss_pred C-------HHHHHHHHHHHHHHHHHHHHhhC--CC-CCHHHHHHHHHH
Confidence 9 89999998766665332 224 23 356777666543
No 66
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.78 E-value=1.4e-07 Score=88.48 Aligned_cols=171 Identities=15% Similarity=0.033 Sum_probs=108.2
Q ss_pred hcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 202 LITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
.++++|++.++.- +..+ +...++++.+.+.+.++++|...-.. +.+. .....+|++||..|++.|+
T Consensus 95 ~l~~~davviGPG-lg~~---~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~-~~~~~~vlTPN~~E~~~L~ 160 (279)
T 3rpz_A 95 LEETYRAIAIGPG-LPQT---ESVQQAVDHVLTADCPVILDAGALAK---------RTYP-KREGPVILTPHPGEFFRMT 160 (279)
T ss_dssp CSSCCSEEEECTT-CCCC---HHHHHHHHHHTTSSSCEEECGGGCCS---------CCCC-CCSSCEEECCCHHHHHHHH
T ss_pred hccCCCEEEECCC-CCCC---HHHHHHHHHHHhhCCCEEEECCccch---------hhhh-hccCCEEEecCHHHHHHHh
Confidence 4578899988742 2221 23345666666778899999852110 0111 1246789999999999999
Q ss_pred CCCCC----cHHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCccccc
Q 015777 282 QGEDP----YDDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQK 357 (400)
Q Consensus 282 ~~~~~----~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~~ 357 (400)
|.... +..+.++++.+++.. +|+-.|. +.++++.+..+++.....+...++|+||++.+.+...+.+|.+
T Consensus 161 g~~~~~~~~d~~~aa~~la~~~~~-~VvlKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~Lag~iaa~lA~g~~---- 234 (279)
T 3rpz_A 161 GVPVNELQKKRAEYAKEWAAQLQT-VIVLKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLTGMILGMLCCHED---- 234 (279)
T ss_dssp CCCHHHHTTSHHHHHHHHHHHHTS-EEEECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHHHHHHHHHHHCSS----
T ss_pred CCCccchHHHHHHHHHHHHHHcCe-EEEEeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHHHHHHHHHHCCCC----
Confidence 97642 233455666654333 4444454 4556665545555555556778999999876665566679999
Q ss_pred hHHHHHHHHHHHH----HHHHHhcccCCCCCCCCHHHHHHHHhC
Q 015777 358 EDQLRDALRFANA----CGALTVMERGAIPALPTREAVLNAIHA 397 (400)
Q Consensus 358 ~~~l~~al~~A~a----~Aa~~v~~~G~~~~~p~~~~l~~~l~~ 397 (400)
+.+|+..|.. ++-....+.|.+ + ....||.+.+.+
T Consensus 235 ---~~~A~~~a~~lh~~Ag~~a~~~~g~~-~-~~a~dl~~~lp~ 273 (279)
T 3rpz_A 235 ---PKHAVLNAVYLHGACAELWTDEHSAH-T-LLAHELSDILPR 273 (279)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHSCTT-S-CCHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHHH
Confidence 8999998864 444445555644 3 356777776643
No 67
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.63 E-value=8.7e-07 Score=89.85 Aligned_cols=174 Identities=11% Similarity=0.007 Sum_probs=107.9
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHH-HHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAK-AAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISF 279 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~-~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~ 279 (400)
+.++.+|.+.++.- +..+ . ...++++ .+++.++++++|+..... . . .+.+ +..+..++++||..|+..
T Consensus 316 ~~~~~~davviGpG-lg~~--~-~~~~~~~~~l~~~~~pvVlDadgl~~-l-~----~~ll-~~~~~~~vlTPN~~E~~~ 384 (502)
T 3rss_A 316 ELSKDVDVVAIGPG-LGNN--E-HVREFVNEFLKTLEKPAVIDADAINV-L-D----TSVL-KERKSPAVLTPHPGEMAR 384 (502)
T ss_dssp HHHTTCSEEEECTT-CCCS--H-HHHHHHHHHHHHCCSCEEECHHHHHT-C-C----HHHH-HHCSSCEEECCCHHHHHH
T ss_pred HHhccCCEEEEeCC-CCCC--H-HHHHHHHHHHHhcCCCEEEeCcccch-h-c----HHHH-hccCCCEEEeCCHHHHHH
Confidence 46788999988742 2222 1 1222222 456679999999842100 0 0 1111 123457999999999999
Q ss_pred ccCCCCCc---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCCcccc
Q 015777 280 LTQGEDPY---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDFSLLQ 356 (400)
Q Consensus 280 l~~~~~~~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~~~~~ 356 (400)
|+|....+ +.+.++++.+++.. +|+..|. +.++++.+..+ +.....+..+++|+||+|.|.+.+.+.+|.+
T Consensus 385 L~g~~~~~~~~d~~aa~~la~~~~~-~VvlKG~-~~vi~~~~~~~-~~~~g~~~~at~GsGD~Lag~iaa~lA~g~~--- 458 (502)
T 3rss_A 385 LVKKTVGDVKYNYELAEEFAKENDC-VLVLKSA-TTIVTDGEKTL-FNITGNTGLSKGGSGDVLTGMIAGFIAQGLS--- 458 (502)
T ss_dssp HHTCCHHHHTTCHHHHHHHHHHHTS-EEEECSS-SEEEECSSCEE-EECCCCGGGSSTTHHHHHHHHHHHHHHTTCC---
T ss_pred HhCCCccchHHHHHHHHHHHHHcCC-EEEEeCC-CeEEEcCCEEE-EECCCCCccccCCchHHHHHHHHHHHhCCCC---
Confidence 99975321 14556666655322 5555565 45556665444 4444556789999999988887777889999
Q ss_pred chHHHHHHHHHHHHHHHHHhccc--CCCCCCCCHHHHHHHHhC
Q 015777 357 KEDQLRDALRFANACGALTVMER--GAIPALPTREAVLNAIHA 397 (400)
Q Consensus 357 ~~~~l~~al~~A~a~Aa~~v~~~--G~~~~~p~~~~l~~~l~~ 397 (400)
+.+|+.+|+..-+..-... |.. + .+..||.+.+.+
T Consensus 459 ----~~~Aa~~A~~~hg~Ag~~aa~g~~-~-~~a~dl~~~lp~ 495 (502)
T 3rss_A 459 ----PLEASTVSVYLHGFAAELFEQDER-G-LTASELLRLIPE 495 (502)
T ss_dssp ----HHHHHHHHHHHHHHHHHTCSSCGG-G-CCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHHH
Confidence 9999999977666542221 432 2 356777766543
No 68
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.56 E-value=2.1e-06 Score=85.57 Aligned_cols=78 Identities=12% Similarity=0.007 Sum_probs=58.4
Q ss_pred hcCCccEEEEccccccCc-----hh----HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEc
Q 015777 202 LITKAKIFHYGSISLITE-----PC----KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI 272 (400)
Q Consensus 202 ~i~~~~~v~~~~~~~~~~-----~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~ 272 (400)
..+.+|.++++|+.++.+ .. .+...+.++..+..++++.++... +.+.+..+..+..+++++|.+-+
T Consensus 233 ~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~e~i~~l~~~~~~iH~E~As----~~~~~l~~~i~~~i~p~vDSlGm 308 (474)
T 3drw_A 233 IGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFAS----VQDRKLRKKIITNILPFVDSVGI 308 (474)
T ss_dssp HHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCC----CSCHHHHHHHHHHTGGGSSEEEE
T ss_pred hhcCCCEEEEeccccccccccccccHHHHHHHHHHHHHHhcCCCCeEEEEeCc----cccHHHHHHHHHHhccccccccc
Confidence 334689999999987655 11 223335556667889999999864 34566666777789999999999
Q ss_pred CHhHHhcccCC
Q 015777 273 SEEEISFLTQG 283 (400)
Q Consensus 273 N~~E~~~l~~~ 283 (400)
||.|+..+.+.
T Consensus 309 NEqELa~l~~~ 319 (474)
T 3drw_A 309 DEAEIAQILSV 319 (474)
T ss_dssp EHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999988764
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.39 E-value=1.3e-05 Score=81.95 Aligned_cols=164 Identities=15% Similarity=-0.030 Sum_probs=103.9
Q ss_pred ccCCccccchhhcCC-ccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhc--cC
Q 015777 191 MLLQEAELDLSLITK-AKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWE--TA 267 (400)
Q Consensus 191 ~~l~~~~l~~~~i~~-~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~--~~ 267 (400)
|...++++. ++.+. ++.++++.-.+ .+ .+.+..+.+.+++.++|+++||..... .. .-.+...++++ ..
T Consensus 292 M~~~~~E~~-e~~~~~~~alvin~G~l-~~--~~~~~~a~~~a~~~~~PvVlDPVg~~a---~~-~r~~~~~~Ll~~~~~ 363 (540)
T 3nl6_A 292 MSEIQSEVN-DLAAIPHATLLLNTGSV-AP--PEMLKAAIRAYNDVKRPIVFDPVGYSA---TE-TRLLLNNKLLTFGQF 363 (540)
T ss_dssp CCCCHHHHH-HHTTSTTCEEEEESSCS-CC--HHHHHHHHHHHHTTTCCEEEECTTCTT---SH-HHHHHHHHHTTSCCC
T ss_pred hcCCHHHHH-HHHhccCCeEEEeCCCC-CH--HHHHHHHHHHHHHcCCCEEEChHHhhc---cc-ccHHHHHHHHhhCCC
Confidence 333444443 56666 88887754322 22 677888888899999999999965322 12 11244455666 79
Q ss_pred cEEEcCHhHHhcccCCCC--------------CcHHHHHHHHHhCCCcEEEEEecCCcEEEEeC----------------
Q 015777 268 DIIKISEEEISFLTQGED--------------PYDDAVVYKLFHANLKLLLVTEGPDGCRYYTK---------------- 317 (400)
Q Consensus 268 dvl~~N~~E~~~l~~~~~--------------~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~---------------- 317 (400)
+||++|..|+..|+|... .+..+.++++.++....|++| |+. -++.++
T Consensus 364 ~vItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlk-G~~-D~I~dg~~~~~~~~~~~~~~~~ 441 (540)
T 3nl6_A 364 SCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCT-GEF-DFIADGTIEGKYSLSKGTNGTS 441 (540)
T ss_dssp SEEEECHHHHHHHTTC--------------CCHHHHHHHHHHHHHTTSEEEEC-SSS-EEEEECCGGGBCCSSSCCSSCC
T ss_pred eEECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEc-CCC-eEEECCCccccccccccccccc
Confidence 999999999999998652 111234566666555556665 433 234444
Q ss_pred ---CceEEEcccc-ccccCCCCchHHHHHHHHHHHHcCC---ccccchHHHHHHHHHHHHH
Q 015777 318 ---DFSGRVQGLK-VEAVDATGAGDAFVAGILSQLSTDF---SLLQKEDQLRDALRFANAC 371 (400)
Q Consensus 318 ---~~~~~vpa~~-v~vvDttGAGDaF~Agfl~~l~~g~---~~~~~~~~l~~al~~A~a~ 371 (400)
+..+.++.-. .-.-.++|.||++.+.+.+.+..+. + +.+|+..|...
T Consensus 442 ~~~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~-------~~~Aa~~a~~~ 495 (540)
T 3nl6_A 442 VEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGN-------LFHAVVAGVML 495 (540)
T ss_dssp TTSSCEEEEECSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCB-------HHHHHHHHHHH
T ss_pred cCCccEEEECCCChhhccCccCchHHHHHHHHHHHhcCcCCCC-------HHHHHHHHHHH
Confidence 3445555433 2233479999999998888888876 5 66776666543
No 70
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.32 E-value=2.6e-06 Score=84.96 Aligned_cols=163 Identities=9% Similarity=0.143 Sum_probs=97.3
Q ss_pred cCCChHHHHHHHHHHcCCCcee--eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCCCce--e------
Q 015777 91 APGGAPANVAVGIARLGGSSAF--IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGAGMR--F------ 160 (400)
Q Consensus 91 ~~GG~~~N~A~~larLG~~~~~--i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~--~------ 160 (400)
+.||.+..+|..++++|.++.+ ++. +|+ .+.+.|.+.+|..-.+. .
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~-------------------l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~ 164 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQ-------------------LSR-----LQANLFLDGPIYVPTLENGEVKLIHP 164 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSC-------------------CCH-----HHHTTSCSSSEEEEEEETTEEEEECG
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCC-------------------CCH-----HHHHhcCCCCeEeecccCCccccccc
Confidence 8999999999999999999988 666 665 23333332223220000 0
Q ss_pred ---cCCCCceEEEEEEcCCCC----------eeEEEecCCCccccCCccccch---hhcCCccEEEEccccccCchh---
Q 015777 161 ---DPGARTALAFVTLRSDGE----------REFMFYRNPSADMLLQEAELDL---SLITKAKIFHYGSISLITEPC--- 221 (400)
Q Consensus 161 ---~~~~~t~~~~i~~~~~g~----------r~~~~~~~~~~~~~l~~~~l~~---~~i~~~~~v~~~~~~~~~~~~--- 221 (400)
....+....+|+-.+.|+ ++|+...+.........+++.. +...++|.++++|+.++.+.+
T Consensus 165 ~e~~~~~~~~iH~I~Ef~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~ 244 (455)
T 1ua4_A 165 KEFSGDEENCIHYIYEFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKE 244 (455)
T ss_dssp GGCSCCCCCCEEEEEEECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHH
T ss_pred hhhccCCCCCceEEEEcCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHH
Confidence 012344555555445554 2343332222111112333331 233459999999998765532
Q ss_pred -HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccC
Q 015777 222 -KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282 (400)
Q Consensus 222 -~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~ 282 (400)
.+...+.++..+..++++.++.... .+.+.....+ .+++++|.+-+|+.|+..+.+
T Consensus 245 ~~~~~l~~i~~L~~~~~~iH~ElAs~----~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~ 301 (455)
T 1ua4_A 245 PFEIVKSNLEVLNEREIPVHLEFAFT----PDEKVREEIL-NVLGMFYSVGLNEVELASIME 301 (455)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECCCC----CCHHHHHHHH-HHGGGCSEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCceEEEEeCCc----cCHHHHHHHH-hhhccCcccccCHHHHHHHHH
Confidence 2222222223467789999999653 3455556666 899999999999999987754
No 71
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.21 E-value=1.4e-05 Score=74.18 Aligned_cols=154 Identities=17% Similarity=0.015 Sum_probs=89.8
Q ss_pred hhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhh-ccCcEEEcCHhHHhc
Q 015777 201 SLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIW-ETADIIKISEEEISF 279 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll-~~~dvl~~N~~E~~~ 279 (400)
++.+.++.+++..- ...+...+.+....+.+++.++|+++||..... +..+ .+..++++ .++++|++|..|+..
T Consensus 52 e~~~~a~al~iNiG-tl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~ga---s~~R-~~~~~~ll~~~~~vIrgN~sEi~~ 126 (265)
T 3hpd_A 52 EMIRLADAVVINIG-TLDSGWRRSMVKATEIANELGKPIVLDPVGAGA---TKFR-TRVSLEILSRGVDVLKGNFGEISA 126 (265)
T ss_dssp HHHHHCSEEEEECT-TCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTT---BHHH-HHHHHHHHHHCCSEEEEEHHHHHH
T ss_pred HHHHHCCeEEEECC-CCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCC---cHHH-HHHHHHHHhcCCcEEcCCHHHHHH
Confidence 45556666665422 223334556677788899999999999964322 1111 12233333 378999999999999
Q ss_pred ccCCCCC---------c---HHHHHHHHHhCCCcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHH
Q 015777 280 LTQGEDP---------Y---DDAVVYKLFHANLKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQ 347 (400)
Q Consensus 280 l~~~~~~---------~---~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~ 347 (400)
|.|.... . ..+.++.+.++.-..|++| |+. -++.++++.+.++.-..-.-..+|.||+..+.+.+.
T Consensus 127 L~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlk-G~~-d~I~dg~~~~~~~~G~~~m~~vtGtGc~Lsg~iaa~ 204 (265)
T 3hpd_A 127 LLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAV-DYVSDGRRTFAVYNGHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSS-EEEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHH
T ss_pred HhcccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEe-CCC-eEEEcCCEEEEECCCChHhhcCCccchHHHHHHHHH
Confidence 9864311 1 1234455655544455555 543 445555556655543333334589999976655555
Q ss_pred HHcCCccccchHHHHHHHHHHH
Q 015777 348 LSTDFSLLQKEDQLRDALRFAN 369 (400)
Q Consensus 348 l~~g~~~~~~~~~l~~al~~A~ 369 (400)
+.++ + +.+|+..|.
T Consensus 205 lA~~-~-------~~~Aa~~a~ 218 (265)
T 3hpd_A 205 VAVT-E-------PLKATTSAL 218 (265)
T ss_dssp HTTS-C-------HHHHHHHHH
T ss_pred HhcC-C-------hHHHHHHHH
Confidence 5555 4 445555554
No 72
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=97.99 E-value=0.00011 Score=73.19 Aligned_cols=161 Identities=7% Similarity=0.098 Sum_probs=93.5
Q ss_pred cCCChHHHHHHHHHHcCCCcee--eecccccccccceeeeccCCCcCCCChHHHHHHHHHHHCCCCCC-----Ccee---
Q 015777 91 APGGAPANVAVGIARLGGSSAF--IGKTTLFCFYEHVKVIILPCPKVGADEFGYMLADILKENNVNGA-----GMRF--- 160 (400)
Q Consensus 91 ~~GG~~~N~A~~larLG~~~~~--i~~~~~~~~~~~~~~~~~~~~~vG~D~~g~~i~~~L~~~gV~~~-----~v~~--- 160 (400)
+.||.+.-+|..|+++|.++.+ ++. +|+ ...+.|...+|..- .+..
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~-------------------~s~-----~~~~l~~~~~i~~p~~~~g~l~~~~~ 172 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQ-------------------NPK-----LQAELFVDGPIYVPVFEGNKLKLVHP 172 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSC-------------------CCH-----HHHTTSCSSSEEEEEECSSCEEEECG
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCC-------------------CCH-----HHHHhcCCCCeeeeeccCCceecccc
Confidence 9999999999999999999988 554 443 23333321222110 0000
Q ss_pred ---cCCCCceEEEEEEcCCCC----------eeEE-EecCCCccccCCccccch---hhcCCccEEEEccccccCc----
Q 015777 161 ---DPGARTALAFVTLRSDGE----------REFM-FYRNPSADMLLQEAELDL---SLITKAKIFHYGSISLITE---- 219 (400)
Q Consensus 161 ---~~~~~t~~~~i~~~~~g~----------r~~~-~~~~~~~~~~l~~~~l~~---~~i~~~~~v~~~~~~~~~~---- 219 (400)
..+.+.-..+|+-.+.|+ ++|+ ..+..+..... .+++.. +.....|.++++|+.++.+
T Consensus 173 ~ea~~~~~~~iH~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~~-~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~ 251 (467)
T 1gc5_A 173 KDAIAEEEELIHYIYEFPRGFQVFDVQAPRENRFIANADDYNARVYM-RREFREGFEEITRNVELAIISGLQVLKEYYPD 251 (467)
T ss_dssp GGSCCSCCCCEEEEEEECSSCEETTEECSSCEEEEEECCSSTTTTCC-CHHHHHSHHHHHTTCSEEEECCGGGCCSBCTT
T ss_pred hhhccCCCCcceEEEEcCCCCeecceeccCCceEEEecCCCCccccc-cHHHHHHHHhhccCCCEEEEechhcccCccCC
Confidence 001233334444333333 2343 33322322222 233321 3345699999999977555
Q ss_pred -hhH-HHH---HHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhccc
Q 015777 220 -PCK-SAH---IAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLT 281 (400)
Q Consensus 220 -~~~-~~~---~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~ 281 (400)
... +.+ .+.++.....++++.++... +.+.+-....+ .+++++|.+-+||.|+..+.
T Consensus 252 g~~~~~~l~~~~~~l~~l~~~~~~iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~ 313 (467)
T 1gc5_A 252 GTTYKDVLDRVESHLNILNRYNVKSHFEFAY----TANRRVREALV-ELLPKFTSVGLNEVELASIM 313 (467)
T ss_dssp SCBHHHHHHHHHHHHHHHHHTTCEEEEECCC----CCCHHHHHHHH-HHGGGCSEEEECHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhhcCCCCeEEEEECC----cccHHHHHHHH-hhccccccCccCHHHHHHHH
Confidence 212 222 23333336678999999865 34566666777 89999999999999998543
No 73
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=97.89 E-value=7.2e-05 Score=74.38 Aligned_cols=75 Identities=11% Similarity=0.104 Sum_probs=54.0
Q ss_pred hhcCCccEEEEccccccCchh----HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhH
Q 015777 201 SLITKAKIFHYGSISLITEPC----KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEE 276 (400)
Q Consensus 201 ~~i~~~~~v~~~~~~~~~~~~----~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E 276 (400)
+...+.|.++++|+.++.+.. .+...+.++..+..++++.++... +.+.+-.+..+ .+++++|.+-+||.|
T Consensus 224 e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As----~~~~~l~~~i~-~ilp~vDSlGmNEqE 298 (457)
T 1l2l_A 224 EIAKRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAF----TPDEVVRLEIV-KLLKHFYSVGLNEVE 298 (457)
T ss_dssp HHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCC----CSSHHHHHHHH-HHGGGCSEEEECHHH
T ss_pred hhccCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECC----cccHHHHHHHH-hhccccccCccCHHH
Confidence 344569999999997766511 122223333447789999999864 34566666777 899999999999999
Q ss_pred Hhcc
Q 015777 277 ISFL 280 (400)
Q Consensus 277 ~~~l 280 (400)
+..+
T Consensus 299 La~l 302 (457)
T 1l2l_A 299 LASV 302 (457)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.43 E-value=0.002 Score=64.67 Aligned_cols=166 Identities=19% Similarity=0.123 Sum_probs=99.0
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccC
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQ 282 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~ 282 (400)
.+++|.+.++.- +..+.. + +.++++ . + ++++|... ++ ...+.+.++...|++||..|+..|++
T Consensus 290 ~~~~~a~~iGPG-lG~~~~-~-l~~~l~---~-~-p~VlDADa---L~------~~~~~~~~~~~~VlTPh~~E~~rL~g 352 (475)
T 3k5w_A 290 PNLLSAFALGMG-LENIPK-D-FNRWLE---L-A-PCVLDAGV---FY------HKEILQALEKEAVLTPHPKEFLSLLN 352 (475)
T ss_dssp CSSCSEEEECTT-CSSCCT-T-HHHHHH---H-S-CEEEEGGG---GG------SGGGGTTTTSSEEEECCHHHHHHHHH
T ss_pred ccCCCEEEEcCC-CCCCHH-H-HHHHHh---c-C-CEEEECcc---cC------CchhhhccCCCEEECCCHHHHHHHhC
Confidence 367888888752 222222 2 344442 2 4 99999741 10 01122334566899999999999987
Q ss_pred C-----CCCc----HHHHHHHHHhCC-CcEEEEEecCCcEEEEeCCceEEEccccccccCCCCchHHHHHHHHHHHHcCC
Q 015777 283 G-----EDPY----DDAVVYKLFHAN-LKLLLVTEGPDGCRYYTKDFSGRVQGLKVEAVDATGAGDAFVAGILSQLSTDF 352 (400)
Q Consensus 283 ~-----~~~~----~~~~~~~l~~~g-~~~vvvT~G~~G~~~~~~~~~~~vpa~~v~vvDttGAGDaF~Agfl~~l~~g~ 352 (400)
. +..+ ..+.++++.++. ...|++| |.. .+++++++.+..+ .-..-..+.|.||++.+.+...+.+|.
T Consensus 353 ~~~~~v~~~~~~~d~~~aa~~la~~~g~~~VvlK-G~~-~vI~~~~~~~~~~-~g~~~mat~GtGdvLsg~Iaa~lA~g~ 429 (475)
T 3k5w_A 353 LVGINISMLELLDNKLEIARDFSQKYPKVVLLLK-GAN-TLIAHQGQVFINI-LGSVALAKAGSGDVLAGLILSLLSQNY 429 (475)
T ss_dssp HTSCCCCTTSGGGSCC--CHHHHHHCTTEEEEEC-SSS-EEEEETTEEEEEC-CCCGGGCSTTHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCcchhHHHHHHHHHHHHHHcCCeEEEEe-CCC-CEEECCCEEEEEC-CCCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 6 3221 124456666655 4455555 443 3444544444333 223345679999999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHhccc-CCCCCCCCHHHHHHHHhC
Q 015777 353 SLLQKEDQLRDALRFANACGALTVMER-GAIPALPTREAVLNAIHA 397 (400)
Q Consensus 353 ~~~~~~~~l~~al~~A~a~Aa~~v~~~-G~~~~~p~~~~l~~~l~~ 397 (400)
+ +.+|+..|...-+..-... +. .+ ....||.+.+.+
T Consensus 430 ~-------~~~Aa~~a~~lhg~ag~~a~~~-~~-~~a~dl~~~l~~ 466 (475)
T 3k5w_A 430 T-------PLDAAINASLAHALASLEFKNN-YA-LTPLDLIEKIKQ 466 (475)
T ss_dssp C-------HHHHHHHHHHHHHHGGGGCSST-TC-CCHHHHHHHHHT
T ss_pred C-------HHHHHHHHHHHHHHHHHHhccC-CC-cCHHHHHHHhhh
Confidence 9 8888887765544443332 21 23 367788877654
No 75
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=54.87 E-value=22 Score=28.16 Aligned_cols=80 Identities=14% Similarity=0.045 Sum_probs=57.3
Q ss_pred CccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCC
Q 015777 205 KAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKISEEEISFLTQGE 284 (400)
Q Consensus 205 ~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~ 284 (400)
.++++..+|. .+.+.+..+.+..+.+++.++.|+.. .++..+..+.+.++.+...++...+. |..
T Consensus 26 ~~~iI~t~Gs-----i~~~~l~~I~~~~~~r~VIi~TD~D~------~GekIRk~i~~~lp~~~hafi~r~~~----gVE 90 (119)
T 2fcj_A 26 PVVIVCTNGT-----ISDARLEELADELEGYDVYLLADADE------AGEKLRRQFRRMFPEAEHLYIDRAYR----EVA 90 (119)
T ss_dssp CCEEEECCSC-----CCHHHHHHHHHHTTTSEEEEECCSSH------HHHHHHHHHHHHCTTSEEECCCTTTC----STT
T ss_pred CCCEEEeCCc-----cCHHHHHHHHHHhcCCCEEEEECCCc------cHHHHHHHHHHHCCCCcEEeccCCcc----Ccc
Confidence 6777877764 23455666666667788888889853 46788888888999999999888875 555
Q ss_pred CCcHHHHHHHHHhCC
Q 015777 285 DPYDDAVVYKLFHAN 299 (400)
Q Consensus 285 ~~~~~~~~~~l~~~g 299 (400)
..+.+...+.|...+
T Consensus 91 ~a~~~~I~~aL~~~~ 105 (119)
T 2fcj_A 91 AAPIWHLAQVLLRAR 105 (119)
T ss_dssp TSCHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHhcc
Confidence 555566666665543
No 76
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=52.00 E-value=99 Score=25.42 Aligned_cols=74 Identities=11% Similarity=0.109 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEc-----CHhHHhcccCCCCCcHHHHHHHHHh
Q 015777 223 SAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI-----SEEEISFLTQGEDPYDDAVVYKLFH 297 (400)
Q Consensus 223 ~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~-----N~~E~~~l~~~~~~~~~~~~~~l~~ 297 (400)
+.+.++++++++.|..+.+..+... .. +.+..+++..|.+.+ +.+....+.|.......+.++.+.+
T Consensus 19 ~~~~~l~~~~~~~g~~~~l~TNG~l----~~----~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l~~ 90 (182)
T 3can_A 19 EFLIDILKRCGQQGIHRAVDTTLLA----RK----ETVDEVMRNCELLLIDLKSMDSTVHQTFCDVPNELILKNIRRVAE 90 (182)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTCC----CH----HHHHHHHHTCSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEECCCCC----CH----HHHHHHHhhCCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHHHh
Confidence 4446888999999999999988642 12 233445555777665 4444555666543222334456666
Q ss_pred CCCcEEE
Q 015777 298 ANLKLLL 304 (400)
Q Consensus 298 ~g~~~vv 304 (400)
.|.+..+
T Consensus 91 ~g~~v~i 97 (182)
T 3can_A 91 ADFPYYI 97 (182)
T ss_dssp TTCCEEE
T ss_pred CCCeEEE
Confidence 6765433
No 77
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=43.56 E-value=1.1e+02 Score=27.55 Aligned_cols=91 Identities=11% Similarity=0.040 Sum_probs=53.8
Q ss_pred cCCccEEEEccccccCchhHHHHHHHHHHHhhC-CCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE-cCHhHHhcc
Q 015777 203 ITKAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-ISEEEISFL 280 (400)
Q Consensus 203 i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~-g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~-~N~~E~~~l 280 (400)
-.++|++-+++-+... ...+.+..+++..++. ++++++|.. +.+.++..++. ++.++++- +|..+- .
T Consensus 45 ~~GAdiIDIg~~s~~~-eE~~rv~~vi~~l~~~~~~pisIDT~-------~~~v~~aal~a-~~Ga~iINdvs~~~d-~- 113 (271)
T 2yci_X 45 EKGAHYLDVNTGPTAD-DPVRVMEWLVKTIQEVVDLPCCLDST-------NPDAIEAGLKV-HRGHAMINSTSADQW-K- 113 (271)
T ss_dssp HTTCSEEEEECCSCSS-CHHHHHHHHHHHHHHHCCCCEEEECS-------CHHHHHHHHHH-CCSCCEEEEECSCHH-H-
T ss_pred HCCCCEEEEcCCcCch-hHHHHHHHHHHHHHHhCCCeEEEeCC-------CHHHHHHHHHh-CCCCCEEEECCCCcc-c-
Confidence 4679999888765322 2355566677766654 899999974 34455555443 35677764 443320 0
Q ss_pred cCCCCCcHHHHHHHHHhCCCcEEEEEecCCc
Q 015777 281 TQGEDPYDDAVVYKLFHANLKLLLVTEGPDG 311 (400)
Q Consensus 281 ~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G 311 (400)
-++++....+.++..|+..++++|
T Consensus 114 -------~~~~~~~~a~~~~~vv~m~~d~~G 137 (271)
T 2yci_X 114 -------MDIFFPMAKKYEAAIIGLTMNEKG 137 (271)
T ss_dssp -------HHHHHHHHHHHTCEEEEESCBTTB
T ss_pred -------cHHHHHHHHHcCCCEEEEecCCCC
Confidence 023444445567777777765555
No 78
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=32.51 E-value=2.7e+02 Score=24.82 Aligned_cols=90 Identities=12% Similarity=0.112 Sum_probs=47.8
Q ss_pred CCccEEEEccccccCchhHHHHHHHHHHHhhC-CCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEE-cCHhHHhccc
Q 015777 204 TKAKIFHYGSISLITEPCKSAHIAAAKAAKDA-GVVLSYDPNLRLPLWPSADKAREGILSIWETADIIK-ISEEEISFLT 281 (400)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~-g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~-~N~~E~~~l~ 281 (400)
.++|++-+++-.. .....+.+.++++..++. ++++++|.. +.+.++..++. ++.++++- +|-.+
T Consensus 37 ~GAdiIDIg~g~~-~v~~~ee~~rvv~~i~~~~~~pisIDT~-------~~~v~~aAl~a-~~Ga~iINdvs~~~----- 102 (262)
T 1f6y_A 37 GGARALDLNVGPA-VQDKVSAMEWLVEVTQEVSNLTLCLDST-------NIKAIEAGLKK-CKNRAMINSTNAER----- 102 (262)
T ss_dssp HTCSEEEEBCC-----CHHHHHHHHHHHHHTTCCSEEEEECS-------CHHHHHHHHHH-CSSCEEEEEECSCH-----
T ss_pred CCCcEEEECCCCC-CCChHHHHHHHHHHHHHhCCCeEEEeCC-------CHHHHHHHHhh-CCCCCEEEECCCCc-----
Confidence 5789998876322 112355666777766665 889999963 34444444443 23566663 44211
Q ss_pred CCCCCcHHHHHHHHHhCCCcEEEEEecCCc
Q 015777 282 QGEDPYDDAVVYKLFHANLKLLLVTEGPDG 311 (400)
Q Consensus 282 ~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G 311 (400)
...++++....+.++..|+..+..+|
T Consensus 103 ----d~~~~~~~~~a~~~~~vvlmh~~~~G 128 (262)
T 1f6y_A 103 ----EKVEKLFPLAVEHGAALIGLTMNKTG 128 (262)
T ss_dssp ----HHHHHHHHHHHHTTCEEEEESCCSSC
T ss_pred ----ccHHHHHHHHHHhCCcEEEEcCCCCC
Confidence 00013344445566766666654443
No 79
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=26.54 E-value=2.9e+02 Score=23.26 Aligned_cols=76 Identities=17% Similarity=0.093 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhhCCCeEEEeCCCCCCCCCChHHHHHhHHhhhccCcEEEc-----CHhHHhcccCCCCCcHHHHHHHHH
Q 015777 222 KSAHIAAAKAAKDAGVVLSYDPNLRLPLWPSADKAREGILSIWETADIIKI-----SEEEISFLTQGEDPYDDAVVYKLF 296 (400)
Q Consensus 222 ~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dvl~~-----N~~E~~~l~~~~~~~~~~~~~~l~ 296 (400)
++.+.++++.+++.|+.+.+..+.... ...+. +.++++.+|.+.+ +++....+.+.......+.++.+.
T Consensus 84 ~~~l~~l~~~~~~~~~~i~i~Tng~~~--~~~~~----~~~l~~~~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l~ 157 (245)
T 3c8f_A 84 AEFVRDWFRACKKEGIHTCLDTNGFVR--RYDPV----IDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLA 157 (245)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECCCCC--CCCHH----HHHHHHTCSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCcC--cCHHH----HHHHHHhCCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHHH
Confidence 445678899999999988888875221 01222 2334444665554 566666666654322234456666
Q ss_pred hCCCcEE
Q 015777 297 HANLKLL 303 (400)
Q Consensus 297 ~~g~~~v 303 (400)
+.|.+..
T Consensus 158 ~~g~~v~ 164 (245)
T 3c8f_A 158 NKNVKVW 164 (245)
T ss_dssp HHTCCEE
T ss_pred hcCCEEE
Confidence 7777643
No 80
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=25.90 E-value=3.4e+02 Score=24.05 Aligned_cols=24 Identities=25% Similarity=0.194 Sum_probs=20.5
Q ss_pred CCChHHHHHHHHHHcCCCceeeec
Q 015777 92 PGGAPANVAVGIARLGGSSAFIGK 115 (400)
Q Consensus 92 ~GG~~~N~A~~larLG~~~~~i~~ 115 (400)
.||-|..+|..|++.|.++.++..
T Consensus 58 s~GIG~aia~~la~~G~~V~~~~~ 81 (294)
T 3r3s_A 58 DSGIGRAAAIAYAREGADVAINYL 81 (294)
T ss_dssp TSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 467799999999999999887665
No 81
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=22.62 E-value=68 Score=26.92 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHcCCCceeeec
Q 015777 95 APANVAVGIARLGGSSAFIGK 115 (400)
Q Consensus 95 ~~~N~A~~larLG~~~~~i~~ 115 (400)
+|.-+|..|++.|.+|.++=+
T Consensus 13 aGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 13 AGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHHHCCCCEEEEEC
Confidence 478999999999999999865
No 82
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=21.85 E-value=3.3e+02 Score=22.21 Aligned_cols=80 Identities=11% Similarity=0.036 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHhhCCCeEEEeCCCCC-CC-------CCChHHHHHhHHhhhccCcEEEcCHhHHhcccCCCCCcHHHHH
Q 015777 221 CKSAHIAAAKAAKDAGVVLSYDPNLRL-PL-------WPSADKAREGILSIWETADIIKISEEEISFLTQGEDPYDDAVV 292 (400)
Q Consensus 221 ~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~-------~~~~~~~~~~~~~ll~~~dvl~~N~~E~~~l~~~~~~~~~~~~ 292 (400)
......++.+.+++.| .| ++..... .+ +.......+.-.+.+..+|+++.+.+ .++.-...
T Consensus 17 ~~~~~~~i~~~L~~~G-~V-l~~hv~~~~l~~~g~~~~~~~~~i~~~d~~~i~~aD~vvA~l~---------~~d~Gt~~ 85 (152)
T 4fyk_A 17 DQALYARIVSRLRRYG-KV-LTEHVADAELEPLGEEAAGGDQFIHEQNLNWLQQADVVVAEVT---------QPSLGVGY 85 (152)
T ss_dssp THHHHHHHHHHHTTTS-EE-CCCC-------------CCCHHHHHHHHHHHHHHCSEEEEECS---------SCCHHHHH
T ss_pred HHHHHHHHHHHHHHcC-cc-cccccCchhhhhccccccCCHHHHHHHHHHHHHHCCEEEEeCC---------CCCCCHHH
Confidence 4466778888889999 44 3332211 11 11222233333456889999998755 12222222
Q ss_pred --HHHHhCCCcEEEEEecCCc
Q 015777 293 --YKLFHANLKLLLVTEGPDG 311 (400)
Q Consensus 293 --~~l~~~g~~~vvvT~G~~G 311 (400)
.....+|.+.+++.....|
T Consensus 86 EiG~A~algkPV~~l~~~~~~ 106 (152)
T 4fyk_A 86 ELGRAVALGKPILCLFRPQSG 106 (152)
T ss_dssp HHHHHHHTTCCEEEEECGGGS
T ss_pred HHHHHHHcCCeEEEEEeCCcc
Confidence 2445678888887775543
No 83
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=21.50 E-value=37 Score=27.25 Aligned_cols=30 Identities=7% Similarity=0.157 Sum_probs=25.7
Q ss_pred ceeeeccCCCcCCCC--hHHHHHHHHHHHCCCCCC
Q 015777 124 HVKVIILPCPKVGAD--EFGYMLADILKENNVNGA 156 (400)
Q Consensus 124 ~~~~~~~~~~~vG~D--~~g~~i~~~L~~~gV~~~ 156 (400)
-+||.++| |+++ .|.+.+.+.|++.||.++
T Consensus 8 P~Qv~Ilp---Vs~~~~~YA~~V~~~L~~~GiRve 39 (130)
T 1v95_A 8 PVDCSVIV---VNKQTKDYAESVGRKVRDLGMVVD 39 (130)
T ss_dssp CCTEEEEE---SSSGGGHHHHHHHHHHHTTTCCEE
T ss_pred CCeEEEEE---eCcchHHHHHHHHHHHHHCCCEEE
Confidence 46889999 8865 789999999999999876
No 84
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=21.04 E-value=4.9e+02 Score=24.01 Aligned_cols=111 Identities=8% Similarity=-0.031 Sum_probs=62.3
Q ss_pred eecCCChHHHHHHHHHHcCCC-ceeeecccccccccceeeec---cCCCcCCCChHHHHHHHHHHHCCCCCCCceecCCC
Q 015777 89 KKAPGGAPANVAVGIARLGGS-SAFIGKTTLFCFYEHVKVII---LPCPKVGADEFGYMLADILKENNVNGAGMRFDPGA 164 (400)
Q Consensus 89 ~~~~GG~~~N~A~~larLG~~-~~~i~~~~~~~~~~~~~~~~---~~~~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~ 164 (400)
-...||.|..+|.+|++.|.. .+++ +++.++..++.+ ....-+|. .-.+.+.+.|++.+-++. +.
T Consensus 41 ivG~GGlG~~ia~~La~~Gvg~itlv----D~d~V~~sNL~rq~~~~~~diG~-~Ka~~~~~~l~~lnp~v~---v~--- 109 (346)
T 1y8q_A 41 LVGLKGLGAEIAKNLILAGVKGLTML----DHEQVTPEDPGAQFLIRTGSVGR-NRAEASLERAQNLNPMVD---VK--- 109 (346)
T ss_dssp EECCSHHHHHHHHHHHHHTCSEEEEE----CCCBCCSSCGGGCTTSCSSCTTS-BHHHHHHHHHHHTCTTSE---EE---
T ss_pred EECCCHHHHHHHHHHHHcCCCEEEEE----ECCCcchhhCCCCCccccccCcC-CHHHHHHHHHHhHCCCeE---EE---
Confidence 346899999999999999974 3333 223333333322 12223665 345667777776542221 10
Q ss_pred CceEEEEEEcCCCCeeEEEecCCCccccCCccccchhhcCCccEEEEccccccCchhHHHHHHHHHHHhhCCCeEEE
Q 015777 165 RTALAFVTLRSDGEREFMFYRNPSADMLLQEAELDLSLITKAKIFHYGSISLITEPCKSAHIAAAKAAKDAGVVLSY 241 (400)
Q Consensus 165 ~t~~~~i~~~~~g~r~~~~~~~~~~~~~l~~~~l~~~~i~~~~~v~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~ 241 (400)
... . . ++. ...+.++++|+|+.+.- +.+....+.+.+++.+++++.
T Consensus 110 -------~~~--~----------~----~~~--~~~~~~~~~dvVv~~~d------~~~~r~~ln~~~~~~~ip~i~ 155 (346)
T 1y8q_A 110 -------VDT--E----------D----IEK--KPESFFTQFDAVCLTCC------SRDVIVKVDQICHKNSIKFFT 155 (346)
T ss_dssp -------EEC--S----------C----GGG--CCHHHHTTCSEEEEESC------CHHHHHHHHHHHHHTTCEEEE
T ss_pred -------EEe--c----------c----cCc--chHHHhcCCCEEEEcCC------CHHHHHHHHHHHHHcCCCEEE
Confidence 000 0 0 111 12356788998875532 234555677788888987764
No 85
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=20.17 E-value=1.4e+02 Score=27.23 Aligned_cols=20 Identities=10% Similarity=-0.062 Sum_probs=16.4
Q ss_pred HHHHHHHHhhCCCeEEEeCC
Q 015777 225 HIAAAKAAKDAGVVLSYDPN 244 (400)
Q Consensus 225 ~~~~~~~a~~~g~~v~~D~~ 244 (400)
+.++.+.|+++|+.+++|-.
T Consensus 167 l~~i~~l~~~~~~~li~De~ 186 (393)
T 3kgw_A 167 LDGFGELCHRYQCLLLVDSV 186 (393)
T ss_dssp CTTHHHHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHcCCEEEEECC
Confidence 44677889999999999964
Done!