Query 015779
Match_columns 400
No_of_seqs 275 out of 1926
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 09:29:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015779.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015779hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2413 Xaa-Pro aminopeptidase 100.0 1.7E-74 3.7E-79 568.6 25.1 364 4-399 11-376 (606)
2 PRK09795 aminopeptidase; Provi 99.9 9E-25 1.9E-29 215.9 10.0 275 2-354 1-289 (361)
3 PRK09795 aminopeptidase; Provi 99.9 1.7E-23 3.8E-28 206.7 17.0 183 170-399 2-188 (361)
4 COG0006 PepP Xaa-Pro aminopept 99.8 1.7E-18 3.7E-23 172.6 17.9 199 163-400 5-216 (384)
5 TIGR02993 ectoine_eutD ectoine 99.8 2.5E-18 5.4E-23 171.6 18.0 202 161-400 4-224 (391)
6 COG0006 PepP Xaa-Pro aminopept 99.7 1E-17 2.2E-22 167.0 11.5 278 2-354 11-311 (384)
7 PF01321 Creatinase_N: Creatin 99.7 6.8E-17 1.5E-21 136.1 9.6 126 4-147 1-132 (132)
8 PRK14575 putative peptidase; P 99.7 3.3E-16 7.3E-21 156.9 15.3 193 172-399 13-239 (406)
9 TIGR02993 ectoine_eutD ectoine 99.7 5.7E-17 1.2E-21 161.8 9.3 264 1-338 11-304 (391)
10 PRK14576 putative endopeptidas 99.7 1.4E-15 3.1E-20 152.3 15.6 194 172-400 13-239 (405)
11 PRK14575 putative peptidase; P 99.6 1.6E-15 3.4E-20 152.1 8.7 275 4-353 12-333 (406)
12 PRK14576 putative endopeptidas 99.5 7.2E-14 1.6E-18 140.1 9.3 273 6-353 14-332 (405)
13 PRK10879 proline aminopeptidas 99.3 1.3E-11 2.8E-16 124.9 14.4 188 166-400 4-235 (438)
14 PF01321 Creatinase_N: Creatin 99.3 3.1E-11 6.6E-16 101.5 11.3 127 171-310 1-132 (132)
15 PRK15173 peptidase; Provisiona 98.9 1.2E-08 2.6E-13 99.4 11.1 99 273-399 54-156 (323)
16 PRK10879 proline aminopeptidas 98.7 6.8E-08 1.5E-12 97.9 9.1 267 2-334 7-312 (438)
17 KOG2414 Putative Xaa-Pro amino 98.4 2E-06 4.3E-11 83.1 10.8 206 147-400 42-290 (488)
18 PRK13607 proline dipeptidase; 98.4 7.8E-07 1.7E-11 90.2 8.5 70 302-400 153-222 (443)
19 PRK07281 methionine aminopepti 98.3 1.8E-06 3.9E-11 82.5 6.8 64 309-399 3-74 (286)
20 PRK15173 peptidase; Provisiona 98.1 1.3E-06 2.8E-11 85.1 3.0 189 104-353 55-250 (323)
21 PRK12897 methionine aminopepti 98.1 6.7E-06 1.4E-10 77.1 7.1 63 309-399 3-70 (248)
22 PRK12318 methionine aminopepti 98.1 5.9E-06 1.3E-10 79.3 6.4 69 303-399 35-111 (291)
23 KOG2737 Putative metallopeptid 98.0 4.3E-05 9.3E-10 73.3 9.7 71 303-400 178-248 (492)
24 cd01085 APP X-Prolyl Aminopept 97.9 2.6E-05 5.7E-10 72.0 6.5 60 318-400 1-62 (224)
25 TIGR00500 met_pdase_I methioni 97.9 3.5E-05 7.5E-10 72.2 7.2 63 309-399 2-69 (247)
26 KOG2414 Putative Xaa-Pro amino 97.8 1.3E-05 2.8E-10 77.6 4.0 262 2-324 68-359 (488)
27 PRK12896 methionine aminopepti 97.7 6.1E-05 1.3E-09 70.8 6.7 64 307-398 7-75 (255)
28 PLN03158 methionine aminopepti 97.7 8.7E-05 1.9E-09 74.0 6.6 69 304-399 131-203 (396)
29 PRK05716 methionine aminopepti 97.6 0.00016 3.4E-09 67.8 7.4 63 309-399 4-71 (252)
30 KOG2413 Xaa-Pro aminopeptidase 97.5 0.00034 7.3E-09 71.2 7.6 101 171-291 11-127 (606)
31 TIGR00495 crvDNA_42K 42K curve 97.3 0.0006 1.3E-08 68.1 7.1 64 308-398 11-83 (389)
32 PTZ00053 methionine aminopepti 97.2 0.0009 2E-08 67.7 7.4 63 309-398 151-217 (470)
33 TIGR00501 met_pdase_II methion 96.9 0.0023 5E-08 61.6 7.2 58 313-399 2-59 (295)
34 PRK13607 proline dipeptidase; 96.9 0.001 2.2E-08 67.6 4.5 64 6-71 17-89 (443)
35 cd01091 CDC68-like Related to 96.4 0.0059 1.3E-07 57.1 5.5 63 316-400 1-73 (243)
36 COG0024 Map Methionine aminope 93.9 0.2 4.2E-06 47.0 7.1 58 310-394 5-68 (255)
37 PRK12897 methionine aminopepti 91.6 0.065 1.4E-06 50.2 0.5 76 225-308 33-120 (248)
38 PRK12318 methionine aminopepti 90.3 0.11 2.4E-06 49.9 0.9 75 225-307 72-160 (291)
39 KOG1189 Global transcriptional 89.6 11 0.00023 40.4 14.4 39 296-334 123-161 (960)
40 PF05195 AMP_N: Aminopeptidase 88.6 2.7 5.9E-05 35.3 8.1 87 166-262 4-118 (134)
41 PF14826 FACT-Spt16_Nlob: FACT 87.6 1 2.2E-05 39.4 4.9 133 2-136 7-159 (163)
42 PF05195 AMP_N: Aminopeptidase 84.9 0.91 2E-05 38.3 3.1 64 2-69 7-77 (134)
43 cd01089 PA2G4-like Related to 81.8 0.82 1.8E-05 42.1 1.8 23 316-338 1-23 (228)
44 PRK12896 methionine aminopepti 81.7 0.21 4.6E-06 46.7 -2.2 61 225-292 39-111 (255)
45 PRK07281 methionine aminopepti 80.7 0.29 6.2E-06 46.9 -1.7 52 225-282 33-100 (286)
46 cd01092 APP-like Similar to Pr 79.4 1.3 2.7E-05 39.8 2.1 120 225-353 24-151 (208)
47 cd01090 Creatinase Creatine am 78.0 0.61 1.3E-05 43.0 -0.4 127 225-354 24-158 (228)
48 TIGR00500 met_pdase_I methioni 77.7 1.1 2.4E-05 41.7 1.2 76 225-308 32-119 (247)
49 PLN03158 methionine aminopepti 77.5 0.39 8.4E-06 48.1 -2.0 75 225-307 166-252 (396)
50 KOG1189 Global transcriptional 72.6 12 0.00025 40.1 7.1 112 43-155 21-145 (960)
51 KOG2738 Putative methionine am 67.5 17 0.00038 34.7 6.5 54 309-389 115-168 (369)
52 PRK05716 methionine aminopepti 66.6 0.68 1.5E-05 43.2 -3.0 77 225-309 34-122 (252)
53 KOG2737 Putative metallopeptid 63.5 2.7 6E-05 41.2 0.5 67 244-317 234-311 (492)
54 cd01087 Prolidase Prolidase. E 61.0 5.9 0.00013 36.6 2.2 106 225-338 24-137 (243)
55 cd01066 APP_MetAP A family inc 56.1 30 0.00066 30.2 6.0 112 225-384 24-142 (207)
56 cd01091 CDC68-like Related to 46.5 18 0.00039 33.7 2.9 101 228-337 34-152 (243)
57 PF14826 FACT-Spt16_Nlob: FACT 42.8 51 0.0011 28.7 5.0 58 166-231 4-79 (163)
58 KOG2775 Metallopeptidase [Gene 38.8 1E+02 0.0022 29.7 6.5 30 366-395 108-141 (397)
59 PRK08671 methionine aminopepti 37.5 66 0.0014 30.7 5.4 61 225-293 25-93 (291)
60 COG1084 Predicted GTPase [Gene 33.7 1.5E+02 0.0032 29.0 6.9 64 302-399 112-175 (346)
61 TIGR00501 met_pdase_II methion 32.2 75 0.0016 30.5 4.8 61 225-293 28-96 (295)
62 cd01086 MetAP1 Methionine Amin 30.9 23 0.00049 32.5 1.0 109 225-338 24-142 (238)
63 PF08799 PRP4: pre-mRNA proces 28.3 64 0.0014 19.7 2.3 21 159-179 10-30 (30)
64 cd01085 APP X-Prolyl Aminopept 27.2 47 0.001 30.4 2.4 80 225-312 26-118 (224)
65 PF14503 YhfZ_C: YhfZ C-termin 25.8 2.3E+02 0.005 26.2 6.6 34 101-136 111-144 (232)
66 PF02879 PGM_PMM_II: Phosphogl 25.4 3.2E+02 0.007 21.1 7.2 71 104-193 21-93 (104)
67 PRK06732 phosphopantothenate-- 25.1 3.4E+02 0.0074 24.8 7.7 59 131-194 133-191 (229)
68 PF09413 DUF2007: Domain of un 23.3 1.7E+02 0.0036 20.8 4.3 50 5-77 12-61 (67)
69 PF04555 XhoI: Restriction end 23.1 1.5E+02 0.0033 26.4 4.6 35 148-182 136-170 (196)
70 PF00557 Peptidase_M24: Metall 22.8 88 0.0019 27.7 3.3 60 226-292 24-91 (207)
71 COG3636 Predicted transcriptio 21.9 1.9E+02 0.0042 22.9 4.4 19 308-326 15-33 (100)
72 cd01090 Creatinase Creatine am 21.6 1.6E+02 0.0034 26.9 4.7 23 316-338 1-23 (228)
73 PRK03094 hypothetical protein; 20.6 1.7E+02 0.0037 22.3 3.8 24 5-28 10-45 (80)
No 1
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-74 Score=568.56 Aligned_cols=364 Identities=44% Similarity=0.776 Sum_probs=339.8
Q ss_pred HHHHHHHHhhcCCCCceEEEEcCCCCCCcccccCccccceecccccccceEEEEeCCceEEEEecccHHHHHhhccCCEE
Q 015779 4 ILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTGEWK 83 (400)
Q Consensus 4 Rl~~lr~~m~~~~~~lDa~li~~~D~h~~e~~~~~~~~~~yltGf~gs~g~~li~~~~a~l~vd~Ry~~qa~~~~~~~~~ 83 (400)
++.++|+.|+..+ ++|||||+.|+|||||++++|+|++|+|||+||+|+++||..+|.|||||||+.||.+|++++|+
T Consensus 11 ~~~~~~~~~~~~~--i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsag~Avit~~~a~lwtD~RY~~QA~~qld~~W~ 88 (606)
T KOG2413|consen 11 ELMRLRELMKSPP--IDAYILPSTDAHQSEYIADRDERRAFLSGFSGSAGTAVITEEEAALWTDGRYFQQAEQQLDSNWT 88 (606)
T ss_pred HHHHHHHHhcCCC--ceEEEccCCchhhhhhhcchhhhhhhhcccCCCcceEEEecCcceEEEccHHHHHHHhhhcccce
Confidence 6788999999988 99999999999999999999999999999999999999999999999999999999999998999
Q ss_pred EEEcCCC-CCHHHHHhccCCCCCEEEECCCcccHHHHHHHHHHHhhcCCeEEeCCcChhhhhhhcCCCCCCCCccccccc
Q 015779 84 LMRMLED-PAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIE 162 (400)
Q Consensus 84 ~~~~~~~-~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~~~~~~~~lid~ir~~K~~~e~~~i~~~~~~ 162 (400)
+++.+.+ +++.+||.+.++.+++||+||.++|+..|+++.+.+..++.+++++..|+||.+|..||+.+.+|+..++..
T Consensus 89 l~k~~~~~~~v~~wl~~~l~~~~~vG~Dp~Lis~~~~~~~~~~l~s~~~~Lv~i~~nLVD~iW~~rP~~~~~~v~~l~~~ 168 (606)
T KOG2413|consen 89 LMKMGEDVPTVEEWLAKVLPEGSRVGIDPTLISFDAWKQLEKSLTSKGLELVPIPGNLVDEIWGDRPERPGNPVIVLDLE 168 (606)
T ss_pred eeeccCCCccHHHHHHHhCCCccccccCcceechhHHHhHHHHHhhCCCeEeeccccchhhhhccCCccCCCceEEeecc
Confidence 9999887 889999999999999999999999999999999999988999999989999999999999999999999999
Q ss_pred ccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEEEECCceEEeecCccccHHHHHHhhc
Q 015779 163 FAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKE 242 (400)
Q Consensus 163 ~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~~~~l~vd~r~~~~~~~~~~~~ 242 (400)
|+|.++..|++.+|+.|+..++++++++.+++|+||+|+||+|+||+|||++|++|+.+++.||+|+.++......++..
T Consensus 169 ~~G~~~~~Kv~~LR~~l~~~~~~a~Vvs~LdeIaWllNLRGsDipynPv~~sY~~it~dei~lfvd~~k~~~~~~~~~~~ 248 (606)
T KOG2413|consen 169 FAGLSVDDKVDNLRKKLKEKKCDAFVVTALDEIAWLLNLRGSDIPYNPVFYSYAIITMDEIFLFVDNSKLSDESKKHLRE 248 (606)
T ss_pred ccCcchhHHHHHHHHHHhhcCCcEEehhhHHHHHHHHhcccCcCCCCchhhhhhhhhhhhhheeecCcccCchhHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999898888888877
Q ss_pred CCcEEEeCccHHHHHHHHHhcCCCCCCCCCCCcEEEECCCcccHHHHhccCCCceeecCChhHHHHhcCCHHHHhhHHHH
Q 015779 243 SGVEVRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKKA 322 (400)
Q Consensus 243 ~g~~~~~~~~i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~~~~~~y~~l~~~~~~~~~~~i~~lRaiK~~~EI~~mr~A 322 (400)
.++++.+|+.+...+..++.+. ....+++-+ .+++...+.+.+...+...+||..+|++||..|+++||.|
T Consensus 249 ~~v~i~pY~~i~~~i~~~~~~~--------~~~~i~ia~-~~~~~i~~~i~~~~~~~~~Spi~~~kAiKN~~E~~gmr~s 319 (606)
T KOG2413|consen 249 DGVEIRPYDQIWSDIKNWASAF--------ADKKIWISP-ETNYGIGELIGEDHSMIDPSPISRAKAIKNDDELKGMRNS 319 (606)
T ss_pred CceeeeeHHHHHHHHHHHhccc--------CceeEeecc-cceeeecccccccccccccCHHHHHHHhcChHHhhhhhhc
Confidence 8999999999998888887531 245677776 4777777777766777778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCCCCCccccccc-c
Q 015779 323 HIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVMLTSIFPKYIIC-C 399 (400)
Q Consensus 323 ~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~~~SF~tIva~-~ 399 (400)
|++|++|+++++.|++.++.+ +..+||.++|++||+||+++.+|.|+||+|||++ |
T Consensus 320 hirD~~Alve~~~wle~~~~~---------------------g~~itE~~~A~kle~fR~~~~~fmglSFeTIS~s~G 376 (606)
T KOG2413|consen 320 HIRDGAALVEYFAWLEKELHK---------------------GYTITEYDAADKLEEFRSRQDHFMGLSFETISSSVG 376 (606)
T ss_pred chhhHHHHHHHHHHHhhhhhc---------------------CcccchhhHHHHHHHHHHhhccccCcCcceeeccCC
Confidence 999999999999999988763 1249999999999999999999999999999977 5
No 2
>PRK09795 aminopeptidase; Provisional
Probab=99.91 E-value=9e-25 Score=215.90 Aligned_cols=275 Identities=19% Similarity=0.255 Sum_probs=190.3
Q ss_pred HHHHHHHHHHhhcCCCCceEEEEcCCCCCCcccccCccccceecccccccceEEEEeCCceEEEEecccHHHHHhhccCC
Q 015779 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQELTGE 81 (400)
Q Consensus 2 ~~Rl~~lr~~m~~~~~~lDa~li~~~D~h~~e~~~~~~~~~~yltGf~gs~g~~li~~~~a~l~vd~Ry~~qa~~~~~~~ 81 (400)
++||++||+.|++++ +||++|+++ .|++|||||+|++|+++|+.++++||||+||.+||++++.+
T Consensus 1 ~~Rl~~l~~~m~~~~--lDa~lI~~~------------~n~~YLTGf~g~~g~llIt~~~~~l~td~ry~~qa~~~~~~- 65 (361)
T PRK09795 1 MTLLASLRDWLKAQQ--LDAVLLSSR------------QNKQPHLGISTGSGYVVISRESAHILVDSRYYADVEARAQG- 65 (361)
T ss_pred CcHHHHHHHHHHHCC--CCEEEECCc------------cccccccCccCCCeEEEEECCCCEEEcCcchHHHHHhhCCC-
Confidence 369999999999998 999999999 59999999999999999999999999999999999888763
Q ss_pred EEEEEcCCCCCHHHHHhccCCC--CCEEEECCCcccHHHHHHHHHHHhhcCCeEEeCCcChhhhhhhcCCCCCCCCcccc
Q 015779 82 WKLMRMLEDPAVDVWMANNLPN--DAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQ 159 (400)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~l~~--~~~vg~d~~~~s~~~~~~l~~~l~~~~~~~~~~~~~lid~ir~~K~~~e~~~i~~~ 159 (400)
+++......+.+.+++.+.++. .++||+|+..+++..++.|.+.+. .++++ ..++.+|.+|++.|
T Consensus 66 ~~v~~~~~~~~~~~~L~~~L~~~~~~~Ig~e~~~~s~~~~~~L~~~l~---~~~~~---~~~~~lR~iKs~~E------- 132 (361)
T PRK09795 66 YQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSWETAHRWQSELN---AKLVS---ATPDVLRQIKTPEE------- 132 (361)
T ss_pred ceEEEecCCccHHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhcC---ccccc---ccHHHHhcCCCHHH-------
Confidence 3333222223455677776653 268999999999999998876542 34443 34899999999999
Q ss_pred cccccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEEEECCceEEeecCccccHHHHHH
Q 015779 160 QIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISF 239 (400)
Q Consensus 160 ~~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~~~~l~vd~r~~~~~~~~~ 239 (400)
|+.+|++.+- +|..+-...+ ....+++++++..+++..
T Consensus 133 ------------i~~~r~a~~i--~~~~~~~~~~----------------------------~i~~G~tE~e~~~~~~~~ 170 (361)
T PRK09795 133 ------------VEKIRLACGI--ADRGAEHIRR----------------------------FIQAGMSEREIAAELEWF 170 (361)
T ss_pred ------------HHHHHHHHHH--HHHHHHHHHH----------------------------hccCCCcHHHHHHHHHHH
Confidence 9999986542 2222111111 122578888888888888
Q ss_pred hhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhccCCCceeecC-ChhH---HHH
Q 015779 240 LKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSDKVLLQQ-SPLA---LAK 308 (400)
Q Consensus 240 ~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l~~~~~~~~~-~~i~---~lR 308 (400)
+...|.+..+|+.+ +++|.+++ |+.| +.++.|.+|.+ +.+.+|.+-..-+++.++ ++.+ .+|
T Consensus 171 ~~~~G~~~~~f~~i------v~sG~~~~~ph~~~~~~~l~~gd~v~~d~g-~~~~gY~sd~tRt~~~g~~~~~~~~~~~~ 243 (361)
T PRK09795 171 MRQQGAEKASFDTI------VASGWRGALPHGKASDKIVAAGEFVTLDFG-ALYQGYCSDMTRTLLVNGEGVSAESHPLF 243 (361)
T ss_pred HHHCCCCcCCCCeE------EEEeccccccCCCCCCceecCCCEEEEEec-cccCCEeecceEEEEeCCcCCchhHHHHH
Confidence 87778887788776 67888877 7655 57899999998 788888764332343322 2222 233
Q ss_pred hcCCHH-HHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccccc
Q 015779 309 AIKNPV-ELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEG 354 (400)
Q Consensus 309 aiK~~~-EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~ 354 (400)
.+-+.. |....--+..++|+...++..-... +....|.+.||.|+
T Consensus 244 ~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~-~~~~~g~~~~~~h~ 289 (361)
T PRK09795 244 NVYQIVLQAQLAAISAIRPGVRCQQVDDAARR-VITEAGYGDYFGHN 289 (361)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH-HHHHcCCCccCCCC
Confidence 333222 2222222345666666565544443 23346777788765
No 3
>PRK09795 aminopeptidase; Provisional
Probab=99.91 E-value=1.7e-23 Score=206.72 Aligned_cols=183 Identities=14% Similarity=0.199 Sum_probs=145.6
Q ss_pred HHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEEEECCceEEeecCccccHHHHHHhhcCCcEEEe
Q 015779 170 EKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRD 249 (400)
Q Consensus 170 ~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~~~~l~vd~r~~~~~~~~~~~~~g~~~~~ 249 (400)
+|++++++.|+++++|+++|++++|++|||||+|+. ++++|+.++.++++|.||..+ ++... .+.++..
T Consensus 2 ~Rl~~l~~~m~~~~lDa~lI~~~~n~~YLTGf~g~~--------g~llIt~~~~~l~td~ry~~q-a~~~~--~~~~v~~ 70 (361)
T PRK09795 2 TLLASLRDWLKAQQLDAVLLSSRQNKQPHLGISTGS--------GYVVISRESAHILVDSRYYAD-VEARA--QGYQLHL 70 (361)
T ss_pred cHHHHHHHHHHHCCCCEEEECCccccccccCccCCC--------eEEEEECCCCEEEcCcchHHH-HHhhC--CCceEEE
Confidence 589999999999999999999999999999999976 788999999899999998764 44443 3344443
Q ss_pred C--c-cHHHHHHHHHhcCCCCCCCCCCCcEEEECCCcccHHHHhccCCC-ceeecCChhHHHHhcCCHHHHhhHHHHHHH
Q 015779 250 Y--D-AVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLNSD-KVLLQQSPLALAKAIKNPVELDGLKKAHIR 325 (400)
Q Consensus 250 ~--~-~i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~~~~~~y~~l~~~-~~~~~~~~i~~lRaiK~~~EI~~mr~A~~~ 325 (400)
+ . .+.+.+..+... .+.++|++|...+++..|..+... .....+..+..+|+||++.||+.||+|+.+
T Consensus 71 ~~~~~~~~~~L~~~L~~--------~~~~~Ig~e~~~~s~~~~~~L~~~l~~~~~~~~~~~lR~iKs~~Ei~~~r~a~~i 142 (361)
T PRK09795 71 LDATNTLTTIVNQIIAD--------EQLQTLGFEGQQVSWETAHRWQSELNAKLVSATPDVLRQIKTPEEVEKIRLACGI 142 (361)
T ss_pred ecCCccHHHHHHHHHHh--------cCCcEEEEecCcccHHHHHHHHHhcCcccccccHHHHhcCCCHHHHHHHHHHHHH
Confidence 3 2 233455555432 134689999988888888776432 222223348999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcccccccc
Q 015779 326 DGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVMLTSIFPKYIICC 399 (400)
Q Consensus 326 d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~~~SF~tIva~~ 399 (400)
.+.++...+.+++ +|+||+|++..+++.+++. |+.+.||+|||+||
T Consensus 143 ~~~~~~~~~~~i~---------------------------~G~tE~e~~~~~~~~~~~~-G~~~~~f~~iv~sG 188 (361)
T PRK09795 143 ADRGAEHIRRFIQ---------------------------AGMSEREIAAELEWFMRQQ-GAEKASFDTIVASG 188 (361)
T ss_pred HHHHHHHHHHhcc---------------------------CCCcHHHHHHHHHHHHHHC-CCCcCCCCeEEEEe
Confidence 8889988777666 6999999999999999876 89999999999998
No 4
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.7e-18 Score=172.59 Aligned_cols=199 Identities=17% Similarity=0.176 Sum_probs=144.9
Q ss_pred ccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEEEECC-ceEEeecCccccHHHHHHhh
Q 015779 163 FAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISFLK 241 (400)
Q Consensus 163 ~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~-~~~l~vd~r~~~~~~~~~~~ 241 (400)
++......|+.+++..|.+.+.|++++++..|++||||++. .++...+ .+++..+ ..+|+++.++... +.....
T Consensus 5 ~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~n~~yltg~~~--~~~~~~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~ 79 (384)
T COG0006 5 FADEEYRARLARLRELMEEAGLDALLLTSPSNFYYLTGFDA--FGFERLQ--ALLVPAEGEPVLFVRGRDEEA-AKETSW 79 (384)
T ss_pred cchHHHHHHHHHHHHHHHHcCCcEEEecCCCceEEEeCCCC--CcccceE--EEEEcCCCceEEEEcchhHHH-HHhhcc
Confidence 44556788999999999999999999999999999999994 1222222 2344444 4889999988654 332221
Q ss_pred cC--CcEEEeCc-c---HHHHHHHHHhcCCCCCCCCCCCcEEEECCCc--ccHHHHhccCC----CceeecCChhHHHHh
Q 015779 242 ES--GVEVRDYD-A---VSSDVVLLQSNQLNPPADVQGSDLIWADPNS--CSYALYSKLNS----DKVLLQQSPLALAKA 309 (400)
Q Consensus 242 ~~--g~~~~~~~-~---i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~--~~~~~y~~l~~----~~~~~~~~~i~~lRa 309 (400)
.. ++.....+ . ..+.+........ .....++++... .++..+..+.. .++++..+++..+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~lR~ 153 (384)
T COG0006 80 IKLENVEVYEDDEDPAAPLDLLGALLEELG------LAGKRIGIESASIFLTLAAFERLQAALPRAELVDASDLVDRLRL 153 (384)
T ss_pred cccCceEEEecCCccccHHHHHHHHHHhcc------ccccceEEEeccCccCHHHHHHHHhhCCCCEEeccHHHHHHHHh
Confidence 11 22222211 1 1223333332210 124678888774 45555554432 267888999999999
Q ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCCC
Q 015779 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVMLT 389 (400)
Q Consensus 310 iK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~~ 389 (400)
|||+.||+.||+|+.+++.|+..++.|++ +|+||++++++|++.+++. |+.+
T Consensus 154 iKs~~EI~~ir~A~~i~~~a~~~~~~~~~---------------------------~g~tE~ev~a~l~~~~~~~-G~~~ 205 (384)
T COG0006 154 IKSPAEIAKIRKAAEIADAALEAALEAIR---------------------------PGMTEAEIAAELEYALRKG-GAEG 205 (384)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------CCCcHHHHHHHHHHHHHHc-CCCc
Confidence 99999999999999999999999999988 5899999999999999987 6999
Q ss_pred CCccccccccC
Q 015779 390 SIFPKYIICCQ 400 (400)
Q Consensus 390 ~SF~tIva~~~ 400 (400)
+||+|||+||.
T Consensus 206 ~sf~~iv~~G~ 216 (384)
T COG0006 206 PSFDTIVASGE 216 (384)
T ss_pred cCcCcEEeccc
Confidence 99999999984
No 5
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.79 E-value=2.5e-18 Score=171.58 Aligned_cols=202 Identities=10% Similarity=0.083 Sum_probs=139.6
Q ss_pred ccccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEEEECC-ceEEeecCccccHHHHHH
Q 015779 161 IEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN-AAFLYVDKRKVSSEVISF 239 (400)
Q Consensus 161 ~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~-~~~l~vd~r~~~~~~~~~ 239 (400)
..|+-.++.+|++++|+.|+++++|++++++++||+|||||++.. +++ ..+++|+.+ +++++++..+... +...
T Consensus 4 ~~f~~~E~~~Rl~rl~~~m~~~~lDalli~~~~ni~YltG~~~~~--~~~--~~~l~v~~~~~~~l~~~~~~~~~-~~~~ 78 (391)
T TIGR02993 4 LFFTRAEYQARLDKTRAAMEARGIDLLIVTDPSNMAWLTGYDGWS--FYV--HQCVLLPPEGEPIWYGRGQDANG-AKRT 78 (391)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCCEEEEcCcccceeeccCCCCc--eEE--EEEEEEcCCCceEEEehhhhhhh-Hhhe
Confidence 346777889999999999999999999999999999999999643 222 134666654 5677776554432 2111
Q ss_pred hhcCCcEEEeCc---------cHHHHHHHHHhcCCCCCCCCCCCcEEEECCCc--ccHHHHhccCC----CceeecCChh
Q 015779 240 LKESGVEVRDYD---------AVSSDVVLLQSNQLNPPADVQGSDLIWADPNS--CSYALYSKLNS----DKVLLQQSPL 304 (400)
Q Consensus 240 ~~~~g~~~~~~~---------~i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~--~~~~~y~~l~~----~~~~~~~~~i 304 (400)
......++..|. +..+.+..+..... ....+|++|.+. +++..|..+.+ .++++.+..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g------~~~~~ig~e~~~~~~~~~~~~~l~~~l~~~~~~d~~~~~ 152 (391)
T TIGR02993 79 AFMDHDNIVGYPDHYVQSTERHPMDYLSEILQDRG------WDSLTIGVEMDNYYFSAAAFASLQKHLPNARFVDATALV 152 (391)
T ss_pred eeccccceeecccccccCCCCCHHHHHHHHHHhcC------CCCCcEEEecCCCccCHHHHHHHHHhCCCCEEEehHHHH
Confidence 000011222222 22233333332210 123479999764 57777766543 3678888899
Q ss_pred HHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhh-
Q 015779 305 ALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS- 383 (400)
Q Consensus 305 ~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~- 383 (400)
..+|+||++.||+.||+|+.+.+.++......++ +|+||.|++..+......
T Consensus 153 ~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~---------------------------pG~tE~ei~~~~~~~~~~~ 205 (391)
T TIGR02993 153 NWQRAVKSETEISYMRVAARIVEKMHQRIFERIE---------------------------PGMRKCDLVADIYDAGIRG 205 (391)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------CCCCHHHHHHHHHHhhhhc
Confidence 9999999999999999999998899988877665 699999999999754221
Q ss_pred C--CCCCCCCccccccccC
Q 015779 384 K--EVMLTSIFPKYIICCQ 400 (400)
Q Consensus 384 ~--~~~~~~SF~tIva~~~ 400 (400)
. .|...++|.+|++||.
T Consensus 206 ~~~~g~~~~~~~~iv~sG~ 224 (391)
T TIGR02993 206 VDGFGGDYPAIVPLLPSGA 224 (391)
T ss_pred ccCcCCCcCCcccccccCc
Confidence 1 2455689999999983
No 6
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.74 E-value=1e-17 Score=167.00 Aligned_cols=278 Identities=22% Similarity=0.284 Sum_probs=201.0
Q ss_pred HHHHHHHHHHhhcCCCCceEEEEcCCCCCCcccccCccccceecccccc--cc--eEEEEeCC-ceEEEEecccHHHHHh
Q 015779 2 AEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTG--SA--GLALITMN-EALLWTDGRYFLQATQ 76 (400)
Q Consensus 2 ~~Rl~~lr~~m~~~~~~lDa~li~~~D~h~~e~~~~~~~~~~yltGf~g--s~--g~~li~~~-~a~l~vd~Ry~~qa~~ 76 (400)
..|+.+++..|.+++ +|+++++++ .|++|+|||+. .. ..++++.+ ++.||++++|..++..
T Consensus 11 ~~rl~~~~~~~~~~~--~~~~~~~~~------------~n~~yltg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 76 (384)
T COG0006 11 RARLARLRELMEEAG--LDALLLTSP------------SNFYYLTGFDAFGFERLQALLVPAEGEPVLFVRGRDEEAAKE 76 (384)
T ss_pred HHHHHHHHHHHHHcC--CcEEEecCC------------CceEEEeCCCCCcccceEEEEEcCCCceEEEEcchhHHHHHh
Confidence 468999999999988 999999999 79999999994 33 34455555 4899999999999988
Q ss_pred hccC---CEEEEEcCCCCC-HHHHHhccCC----CCCEEEECCCc--ccHHHHHHHHHHHhhcCCeEEeCCcChhhhhhh
Q 015779 77 ELTG---EWKLMRMLEDPA-VDVWMANNLP----NDAAIGVDPWC--VSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWK 146 (400)
Q Consensus 77 ~~~~---~~~~~~~~~~~~-~~~~l~~~l~----~~~~vg~d~~~--~s~~~~~~l~~~l~~~~~~~~~~~~~lid~ir~ 146 (400)
.... .+..+.....+. ..+.+...+. ...++|++... ++...+..++..++. .++++. .++++++|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~--~~~~~~-~~~i~~lR~ 153 (384)
T COG0006 77 TSWIKLENVEVYEDDEDPAAPLDLLGALLEELGLAGKRIGIESASIFLTLAAFERLQAALPR--AELVDA-SDLVDRLRL 153 (384)
T ss_pred hcccccCceEEEecCCccccHHHHHHHHHHhccccccceEEEeccCccCHHHHHHHHhhCCC--CEEecc-HHHHHHHHh
Confidence 7642 344554333221 1122332222 24679999875 788889999887764 378887 899999999
Q ss_pred cCCCCCCCCcccccccccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEEEECCceEEe
Q 015779 147 NRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLY 226 (400)
Q Consensus 147 ~K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~~~~l~ 226 (400)
+|++.| |+.||+++.- +++.+....+.+ ..+
T Consensus 154 iKs~~E-------------------I~~ir~A~~i--~~~a~~~~~~~~----------------------------~~g 184 (384)
T COG0006 154 IKSPAE-------------------IAKIRKAAEI--ADAALEAALEAI----------------------------RPG 184 (384)
T ss_pred cCCHHH-------------------HHHHHHHHHH--HHHHHHHHHHhc----------------------------cCC
Confidence 999999 9999998753 222221111111 145
Q ss_pred ecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhccCCCceee
Q 015779 227 VDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSDKVLL 299 (400)
Q Consensus 227 vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l~~~~~~~ 299 (400)
++|+++..++...+...|.+..+|+.+ +++|.|++ |+.+ +.++.|.||.+ +.|.+|++.. ++.+.
T Consensus 185 ~tE~ev~a~l~~~~~~~G~~~~sf~~i------v~~G~n~a~pH~~~~~~~~~~gd~vliD~G-~~~~gY~sDi-TRT~~ 256 (384)
T COG0006 185 MTEAEIAAELEYALRKGGAEGPSFDTI------VASGENAALPHYTPSDRKLRDGDLVLIDLG-GVYNGYCSDI-TRTFP 256 (384)
T ss_pred CcHHHHHHHHHHHHHHcCCCccCcCcE------EeccccccCcCCCCCcccccCCCEEEEEee-eEECCccccc-eeEEe
Confidence 688888888888887778777788888 78899988 7665 57899999998 7888887644 25555
Q ss_pred cCChhHHHHhcCCHHHHhhHHH-HHHHHHHHHHHHHHHHHHHhhhhhccCcccccc
Q 015779 300 QQSPLALAKAIKNPVELDGLKK-AHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEG 354 (400)
Q Consensus 300 ~~~~i~~lRaiK~~~EI~~mr~-A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~ 354 (400)
.+.|-+.+|.+.+.+.-+..+. +++++|....+ ++-+..+.....|.+.+|.|+
T Consensus 257 ~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~-vd~~ar~~i~~~g~~~~~~h~ 311 (384)
T COG0006 257 IGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGE-VDAAARQVLEKAGYGLYFLHG 311 (384)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHH-HHHHHHHHHHhcCCcccccCC
Confidence 6688899998877776666655 45788875544 343444555567888889888
No 7
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.70 E-value=6.8e-17 Score=136.14 Aligned_cols=126 Identities=24% Similarity=0.371 Sum_probs=101.7
Q ss_pred HHHHHHHHhhcCCCCceEEEEcCCCCCCcccccCccccceecccc---cccceEEE-EeCCceEEEEe-cccHHHHHhhc
Q 015779 4 ILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGF---TGSAGLAL-ITMNEALLWTD-GRYFLQATQEL 78 (400)
Q Consensus 4 Rl~~lr~~m~~~~~~lDa~li~~~D~h~~e~~~~~~~~~~yltGf---~gs~g~~l-i~~~~a~l~vd-~Ry~~qa~~~~ 78 (400)
|+++||+.|+++| +|++||+++ .|++|+||| +++.++++ |+.++++||+| ++|..+++...
T Consensus 1 Rl~rl~~~m~~~g--id~lll~~~------------~ni~YltG~~~~~~~~~~~l~i~~~~~~l~~~~~~~~~~~~~~~ 66 (132)
T PF01321_consen 1 RLERLRAAMAEAG--IDALLLTSP------------ENIRYLTGFRWQPGERPVLLVITADGAVLFVPKGEYERAAEESA 66 (132)
T ss_dssp HHHHHHHHHHHTT---SEEEEESH------------HHHHHHHS--ST-TSSEEEEEEESSSEEEEEEGGGHHHHHHHHT
T ss_pred CHHHHHHHHHHCC--CCEEEEcCh------------hhceEecCCCcCCCcceEEEEecccCcEEEeccccHHHHHHhhc
Confidence 8999999999998 999999999 699999999 88888877 88998899999 77766666651
Q ss_pred cCCEEEEEcCC-CCCHHHHHhccCCCCCEEEECCCcccHHHHHHHHHHHhhcCCeEEeCCcChhhhhhhc
Q 015779 79 TGEWKLMRMLE-DPAVDVWMANNLPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKN 147 (400)
Q Consensus 79 ~~~~~~~~~~~-~~~~~~~l~~~l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~~~~~~~~lid~ir~~ 147 (400)
. ..++..+.+ .+.+.++|.+.+.+.++||+|+..+|+..++.|++.+++ .++++. +++++++|++
T Consensus 67 ~-~~~v~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~~~~~~--~~~v~~-~~~i~~~R~I 132 (132)
T PF01321_consen 67 P-DDEVVEYEDPYEAIAEALKKLGPEGKRIGVEPDSLSAAEYQRLQEALPG--AEFVDA-SPLIEELRMI 132 (132)
T ss_dssp T-SSEEEEESTHHHHHHHHHHHHTTTTSEEEEETTTSBHHHHHHHHHHSTT--SEEEEE-HHHHHHHHTS
T ss_pred C-CceEEEEecccchHHHHHHHhCCCCCEEEEcCCcChHHHHHHHHHhCCC--CEEEEc-HHHHHHcCcC
Confidence 2 235554444 345668888877777899999999999999999998864 699997 8899999975
No 8
>PRK14575 putative peptidase; Provisional
Probab=99.69 E-value=3.3e-16 Score=156.92 Aligned_cols=193 Identities=15% Similarity=0.079 Sum_probs=132.3
Q ss_pred HHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccce-eEEEEECC-c-eE-EeecCccccHHHHHHhhcCCc-E
Q 015779 172 LKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVH-AFAIVTTN-A-AF-LYVDKRKVSSEVISFLKESGV-E 246 (400)
Q Consensus 172 i~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~-~~lli~~~-~-~~-l~vd~r~~~~~~~~~~~~~g~-~ 246 (400)
++++|+.|+++++|+++++.++|++||||+.+....+++... +.++|+.+ . +. ++++..+... ++........ +
T Consensus 13 ~~rlr~~m~~~glD~lvl~~p~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~~~-~~~~~~~~~~~~ 91 (406)
T PRK14575 13 SRKLRTIMERDNIDAVIVTTCDNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEAAS-LTLDMPNAELKT 91 (406)
T ss_pred HHHHHHHHHHcCCCEEeecCcchheeecccccccceecccCCceEEEEEcCCCCCceEEechhhhhh-hccccccccccc
Confidence 789999999999999999999999999999976545555432 45677766 3 44 7777655443 2211100000 1
Q ss_pred EE-------eCc------------------cHHHHHHHHHhcCCCCCCCCCCCcEEEECCCcccHHHHhccC----CCce
Q 015779 247 VR-------DYD------------------AVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKLN----SDKV 297 (400)
Q Consensus 247 ~~-------~~~------------------~i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~~~~~~y~~l~----~~~~ 297 (400)
+. ++. ...+.+........ ..+++|++|.+.++...|..+. ..++
T Consensus 92 ~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~igve~~~~~~~~~~~l~~~lp~~~~ 165 (406)
T PRK14575 92 FPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDAR------VLNKKIAIDLNIMSNGGKRVIDAVMPNVDF 165 (406)
T ss_pred CCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcC------CcCCEEEEccCCCCHHHHHHHHHhCCCCeE
Confidence 11 121 11112222221100 1457899998877877776653 3358
Q ss_pred eecCChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHH
Q 015779 298 LLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKL 377 (400)
Q Consensus 298 ~~~~~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l 377 (400)
++....+..+|+||++.||+.||+|..+.+.++...+..++ +|+||.|++..+
T Consensus 166 ~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~---------------------------pG~tE~elaa~~ 218 (406)
T PRK14575 166 VDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIR---------------------------VGCTSAELTAAY 218 (406)
T ss_pred EEcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------CCCCHHHHHHHH
Confidence 88888999999999999999999999998889888776655 699999999999
Q ss_pred HHHHhhCCCCCCCCcccccccc
Q 015779 378 ESFRASKEVMLTSIFPKYIICC 399 (400)
Q Consensus 378 ~~~~~~~~~~~~~SF~tIva~~ 399 (400)
.+..... |....++.+|+++|
T Consensus 219 ~~~~~~~-g~~~~~~~~~v~~G 239 (406)
T PRK14575 219 KAAVMSK-SETHFSRFHLISVG 239 (406)
T ss_pred HHHHHHc-CCCcCCcCceEEEC
Confidence 8776654 45444444677766
No 9
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.69 E-value=5.7e-17 Score=161.84 Aligned_cols=264 Identities=12% Similarity=0.086 Sum_probs=161.3
Q ss_pred CHHHHHHHHHHhhcCCCCceEEEEcCCCCCCcccccCccccceecccccccc----eEEEEeCC-ceEEEEecccHHHHH
Q 015779 1 MAEILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSA----GLALITMN-EALLWTDGRYFLQAT 75 (400)
Q Consensus 1 ~~~Rl~~lr~~m~~~~~~lDa~li~~~D~h~~e~~~~~~~~~~yltGf~gs~----g~~li~~~-~a~l~vd~Ry~~qa~ 75 (400)
|++|+++||+.|++++ +|++||+++ .|++|||||++.. ..++|+.+ +++|+++.++..+++
T Consensus 11 ~~~Rl~rl~~~m~~~~--lDalli~~~------------~ni~YltG~~~~~~~~~~~l~v~~~~~~~l~~~~~~~~~~~ 76 (391)
T TIGR02993 11 YQARLDKTRAAMEARG--IDLLIVTDP------------SNMAWLTGYDGWSFYVHQCVLLPPEGEPIWYGRGQDANGAK 76 (391)
T ss_pred HHHHHHHHHHHHHHcC--CCEEEEcCc------------ccceeeccCCCCceEEEEEEEEcCCCceEEEehhhhhhhHh
Confidence 4689999999999998 999999999 6999999999754 35666654 567777666666665
Q ss_pred hhccC-CEEEEEcC------CCCCHHHHHhccCC----CCCEEEECCCc--ccHHHHHHHHHHHhhcCCeEEeCCcChhh
Q 015779 76 QELTG-EWKLMRML------EDPAVDVWMANNLP----NDAAIGVDPWC--VSIDTAQRWERAFAKKQQKLVQTSTNLVD 142 (400)
Q Consensus 76 ~~~~~-~~~~~~~~------~~~~~~~~l~~~l~----~~~~vg~d~~~--~s~~~~~~l~~~l~~~~~~~~~~~~~lid 142 (400)
.+... .-.+..+. ..+...+++.+.++ ...+||+|.+. +++..++.|.+.++ ++++++. +.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~e~~~~~~~~~~~~~l~~~l~--~~~~~d~-~~~~~ 153 (391)
T TIGR02993 77 RTAFMDHDNIVGYPDHYVQSTERHPMDYLSEILQDRGWDSLTIGVEMDNYYFSAAAFASLQKHLP--NARFVDA-TALVN 153 (391)
T ss_pred heeeccccceeecccccccCCCCCHHHHHHHHHHhcCCCCCcEEEecCCCccCHHHHHHHHHhCC--CCEEEeh-HHHHH
Confidence 43210 00111111 11122334444332 23479999874 78999999998875 3688887 78999
Q ss_pred hhhhcCCCCCCCCcccccccccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEEEECCc
Q 015779 143 KVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNA 222 (400)
Q Consensus 143 ~ir~~K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~~ 222 (400)
++|++|++.| |+.||++-+- ++..+ ..+. +.
T Consensus 154 ~lR~iKs~~E-------------------I~~lr~A~~i--~~~~~----~~~~------------------------~~ 184 (391)
T TIGR02993 154 WQRAVKSETE-------------------ISYMRVAARI--VEKMH----QRIF------------------------ER 184 (391)
T ss_pred HHHccCCHHH-------------------HHHHHHHHHH--HHHHH----HHHH------------------------HH
Confidence 9999999999 9999986531 12111 1110 01
Q ss_pred eEEeecCccccHHHHHHhhc----CCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhc
Q 015779 223 AFLYVDKRKVSSEVISFLKE----SGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSK 291 (400)
Q Consensus 223 ~~l~vd~r~~~~~~~~~~~~----~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~ 291 (400)
...+++|+++..++...... .|.....+..+ +++|.+++ |+.| +.++.|.+|.+ +.|.+|.+
T Consensus 185 i~pG~tE~ei~~~~~~~~~~~~~~~g~~~~~~~~i------v~sG~~~a~pH~~~~~~~l~~gd~v~iD~g-~~~~GY~s 257 (391)
T TIGR02993 185 IEPGMRKCDLVADIYDAGIRGVDGFGGDYPAIVPL------LPSGADASAPHLTWDDSPMKVGEGTFFEIA-GCYKRYHC 257 (391)
T ss_pred hcCCCCHHHHHHHHHHhhhhcccCcCCCcCCcccc------cccCccccCCCCCCCCCcccCCCEEEEEee-eecccCcc
Confidence 12467777776555432111 11112222222 56777766 7655 56789999998 78888876
Q ss_pred cCCCceeecCChhHHHHhcCCHHH-HhhHHHHHHHHHHHHHHHHHHHH
Q 015779 292 LNSDKVLLQQSPLALAKAIKNPVE-LDGLKKAHIRDGAAIVQYIIWLD 338 (400)
Q Consensus 292 l~~~~~~~~~~~i~~lRaiK~~~E-I~~mr~A~~~d~~a~~~~l~~l~ 338 (400)
-.. +.+..+.|-..+|.+-+... ....--+.+++|+.+.++.....
T Consensus 258 D~t-RT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~ 304 (391)
T TIGR02993 258 PLS-RTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFF 304 (391)
T ss_pred cee-EEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 432 33444456556654433322 22222244666666655544433
No 10
>PRK14576 putative endopeptidase; Provisional
Probab=99.66 E-value=1.4e-15 Score=152.31 Aligned_cols=194 Identities=15% Similarity=0.027 Sum_probs=128.8
Q ss_pred HHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCcc-ceeEEEEECCc---eEEeecCccccHHHHHHhhcCCc-E
Q 015779 172 LKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPV-VHAFAIVTTNA---AFLYVDKRKVSSEVISFLKESGV-E 246 (400)
Q Consensus 172 i~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~-~~~~lli~~~~---~~l~vd~r~~~~~~~~~~~~~g~-~ 246 (400)
-+++|+.|+++++|++++++++|++||||+.+....+.+. ...+++++.+. ..++++..+... ++.......+ +
T Consensus 13 ~~r~r~~M~~~gldalll~~p~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~~-~~~~~~~~~~~~ 91 (405)
T PRK14576 13 SRKARVVMEREGIDALVVTVCDNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAAS-THFDMPNSVLKT 91 (405)
T ss_pred HHHHHHHHHHcCCCEEEeccccceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhhh-hhcccccccccc
Confidence 3589999999999999999999999999999764344422 22344454442 356776554332 2110000000 0
Q ss_pred EEeCcc------------------------HHHHHHHHHhcCCCCCCCCCCCcEEEECCCcccHHHHhcc----CCCcee
Q 015779 247 VRDYDA------------------------VSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVL 298 (400)
Q Consensus 247 ~~~~~~------------------------i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~~~~~~y~~l----~~~~~~ 298 (400)
+..|.+ +.+.+..+..... ..+.+|++|.+.++...+..+ +..+++
T Consensus 92 ~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g------~~~~rigve~~~~~~~~~~~l~~~~~~~~~v 165 (405)
T PRK14576 92 FPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAG------VLDKTIAIELQAMSNGGKGVLDKVAPGLKLV 165 (405)
T ss_pred CCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhC------CCCCEEEEccCCCCHHHHHHHHhhCCCCeEE
Confidence 111100 1122222222110 135799999877777766544 334688
Q ss_pred ecCChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHH
Q 015779 299 LQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLE 378 (400)
Q Consensus 299 ~~~~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~ 378 (400)
+.+..+..+|+||++.||+.||+|+.+.+.++...+..++ +|+||.|++..++
T Consensus 166 d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~---------------------------pG~tE~elaa~~~ 218 (405)
T PRK14576 166 DSTALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIR---------------------------VGCTAAELTAAFK 218 (405)
T ss_pred EcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------CCCCHHHHHHHHH
Confidence 8888999999999999999999999999899988776665 6999999999999
Q ss_pred HHHhhCCCCCCCCccccccccC
Q 015779 379 SFRASKEVMLTSIFPKYIICCQ 400 (400)
Q Consensus 379 ~~~~~~~~~~~~SF~tIva~~~ 400 (400)
..+... |....++.+||++|.
T Consensus 219 ~~~~~~-g~~~~~~~~~v~~G~ 239 (405)
T PRK14576 219 AAVMSF-PETNFSRFNLISVGD 239 (405)
T ss_pred HHHHHc-CCCcCCCCCEEEECC
Confidence 888766 444455558888873
No 11
>PRK14575 putative peptidase; Provisional
Probab=99.60 E-value=1.6e-15 Score=152.11 Aligned_cols=275 Identities=12% Similarity=0.109 Sum_probs=167.7
Q ss_pred HHHHHHHHhhcCCCCceEEEEcCCCCCCcccccCccccceecccccccc---------eEEEEeCC-c-eE-EEEecccH
Q 015779 4 ILAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSA---------GLALITMN-E-AL-LWTDGRYF 71 (400)
Q Consensus 4 Rl~~lr~~m~~~~~~lDa~li~~~D~h~~e~~~~~~~~~~yltGf~gs~---------g~~li~~~-~-a~-l~vd~Ry~ 71 (400)
-+.+||+.|+++| +|++||+++ .|++|||||.+.. ..++|+.+ + +. ++++....
T Consensus 12 ~~~rlr~~m~~~g--lD~lvl~~p------------~n~~ylTG~~~~~~~~~r~~~~~~lvv~~~~~~p~~~i~p~~E~ 77 (406)
T PRK14575 12 VSRKLRTIMERDN--IDAVIVTTC------------DNFYHVTGILSFFMYTFRNTGTAIAVVFRDVKIPSLIIMNEFEA 77 (406)
T ss_pred HHHHHHHHHHHcC--CCEEeecCc------------chheeecccccccceecccCCceEEEEEcCCCCCceEEechhhh
Confidence 3679999999998 999999999 5999999998743 23678876 3 45 77877777
Q ss_pred HHHHhhccC----CEEEEEcCCCCC-----------------HH---HHHhccC----CCCCEEEECCCcccHHHHHHHH
Q 015779 72 LQATQELTG----EWKLMRMLEDPA-----------------VD---VWMANNL----PNDAAIGVDPWCVSIDTAQRWE 123 (400)
Q Consensus 72 ~qa~~~~~~----~~~~~~~~~~~~-----------------~~---~~l~~~l----~~~~~vg~d~~~~s~~~~~~l~ 123 (400)
.+++.+... .+.++...++|. .. +.+.+.| ..+++||+|.+.++...++.|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~igve~~~~~~~~~~~l~ 157 (406)
T PRK14575 78 ASLTLDMPNAELKTFPVWVDVDDPFNMRDSANNNKERPIGPPIESVCNILKDALNDARVLNKKIAIDLNIMSNGGKRVID 157 (406)
T ss_pred hhhcccccccccccCCceEeeeccccccchhhhhhcCCCCCCHHHHHHHHHHHHHhcCCcCCEEEEccCCCCHHHHHHHH
Confidence 777754211 122332211111 11 1233322 2457999999999999999998
Q ss_pred HHHhhcCCeEEeCCcChhhhhhhcCCCCCCCCcccccccccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCC
Q 015779 124 RAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRG 203 (400)
Q Consensus 124 ~~l~~~~~~~~~~~~~lid~ir~~K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG 203 (400)
..++. +++++. +.+++++|.+|++.| |+.+|++-+- ++..+-...
T Consensus 158 ~~lp~--~~~~d~-~~~l~~lR~iKs~~E-------------------I~~~r~A~~i--~~~a~~~~~----------- 202 (406)
T PRK14575 158 AVMPN--VDFVDS-SSIFNELRVIKSPWE-------------------IKRLRKSAEI--TEYGITEAS----------- 202 (406)
T ss_pred HhCCC--CeEEEc-HHHHHHHHhcCCHHH-------------------HHHHHHHHHH--HHHHHHHHH-----------
Confidence 87753 688887 789999999999999 9999986532 111110000
Q ss_pred CCCCCCccceeEEEEECCceEEeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC-CCCC-----CCCcEE
Q 015779 204 TDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP-PADV-----QGSDLI 277 (400)
Q Consensus 204 ~d~~~~p~~~~~lli~~~~~~l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~-h~~~-----~~~~~v 277 (400)
+....++++.++...+...+...+....++..+ +..|.+.. |+.+ +.++.|
T Consensus 203 -----------------~~i~pG~tE~elaa~~~~~~~~~g~~~~~~~~~------v~~G~~~~~h~~~~~~~l~~Gd~v 259 (406)
T PRK14575 203 -----------------KLIRVGCTSAELTAAYKAAVMSKSETHFSRFHL------ISVGADFSPKLIPSNTKACSGDLI 259 (406)
T ss_pred -----------------HhccCCCCHHHHHHHHHHHHHHcCCCcCCcCce------EEECCCcccCCCCCCCcCCCCCEE
Confidence 011246777777766655543333221111111 22233322 5444 567899
Q ss_pred EECCCcccHHHHhccCCCceeecCChhHHHHhcCCHHH-HhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccc
Q 015779 278 WADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVE-LDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLE 353 (400)
Q Consensus 278 ~id~~~~~~~~y~~l~~~~~~~~~~~i~~lRaiK~~~E-I~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~ 353 (400)
.+|.+ +.+.+|.+-. .+.+.++.|-..+|.+.+..- ....--+..++|+.+.++.......+ ..+|...|+.|
T Consensus 260 ~iD~g-~~~~GY~sdi-tRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~-~~~G~~~~~~~ 333 (406)
T PRK14575 260 KFDCG-VDVDGYGADI-ARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVI-KKSGLPNYNRG 333 (406)
T ss_pred EEEec-eEECCEeeee-EEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH-HHcCCccccCC
Confidence 99987 6778886533 244444556566665444333 22222245677777767666554333 34566666543
No 12
>PRK14576 putative endopeptidase; Provisional
Probab=99.49 E-value=7.2e-14 Score=140.08 Aligned_cols=273 Identities=15% Similarity=0.108 Sum_probs=163.6
Q ss_pred HHHHHHhhcCCCCceEEEEcCCCCCCcccccCccccceecccccccc-------eEEE--EeCC-c-e-EEEEecccHHH
Q 015779 6 AALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSA-------GLAL--ITMN-E-A-LLWTDGRYFLQ 73 (400)
Q Consensus 6 ~~lr~~m~~~~~~lDa~li~~~D~h~~e~~~~~~~~~~yltGf~gs~-------g~~l--i~~~-~-a-~l~vd~Ry~~q 73 (400)
+++|+.|+++| +|++|++++ .|++|+|||.... ++++ ++.+ + + .++++......
T Consensus 14 ~r~r~~M~~~g--ldalll~~p------------~ni~YlTG~~~~~~~~~r~~~~~v~v~~~d~~~p~~~i~~~~e~~~ 79 (405)
T PRK14576 14 RKARVVMEREG--IDALVVTVC------------DNFYYLTGFASFFMYTFRHTGAAVAIMFRDANIPSQIIMNEFEAAS 79 (405)
T ss_pred HHHHHHHHHcC--CCEEEeccc------------cceeeeccccccceeeeccCCeEEEEecCCCCCCcEEEechhhhhh
Confidence 58999999998 999999999 5999999999651 3232 2344 2 3 67776665555
Q ss_pred HHhhcc----CCEEEEEcCCCC--C-----------------HHHHHhccCC----CCCEEEECCCcccHHHHHHHHHHH
Q 015779 74 ATQELT----GEWKLMRMLEDP--A-----------------VDVWMANNLP----NDAAIGVDPWCVSIDTAQRWERAF 126 (400)
Q Consensus 74 a~~~~~----~~~~~~~~~~~~--~-----------------~~~~l~~~l~----~~~~vg~d~~~~s~~~~~~l~~~l 126 (400)
++.... ..+.++...+++ . +.+.+.+.|. .+++||+|.+.++...+..|...+
T Consensus 80 ~~~~~~~~~~~~~~~~~d~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~rigve~~~~~~~~~~~l~~~~ 159 (405)
T PRK14576 80 THFDMPNSVLKTFPVWVDVDDPRNPHHHYKKRDRPIGPPVEAVFSLVKNALEDAGVLDKTIAIELQAMSNGGKGVLDKVA 159 (405)
T ss_pred hhccccccccccCCceEeecCCcccchhhhccccCCCCcHHHHHHHHHHHHHHhCCCCCEEEEccCCCCHHHHHHHHhhC
Confidence 542210 012222111111 0 1122222221 347999999889999888888766
Q ss_pred hhcCCeEEeCCcChhhhhhhcCCCCCCCCcccccccccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCC
Q 015779 127 AKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDV 206 (400)
Q Consensus 127 ~~~~~~~~~~~~~lid~ir~~K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~ 206 (400)
+ ++++++. +.+++++|.+|++.| |+.+|++.+- ++..+....+
T Consensus 160 ~--~~~~vd~-~~~l~~lR~iKs~~E-------------------I~~~r~A~~i--~~~~~~~~~~------------- 202 (405)
T PRK14576 160 P--GLKLVDS-TALFNEIRMIKSPWE-------------------IEHLRKSAEI--TEYGIASAAK------------- 202 (405)
T ss_pred C--CCeEEEc-HHHHHHHHcCCCHHH-------------------HHHHHHHHHH--HHHHHHHHHH-------------
Confidence 4 3688886 789999999999999 9999986542 2222211111
Q ss_pred CCCccceeEEEEECCceEEeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC-CCCC-----CCCcEEEEC
Q 015779 207 PYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP-PADV-----QGSDLIWAD 280 (400)
Q Consensus 207 ~~~p~~~~~lli~~~~~~l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~-h~~~-----~~~~~v~id 280 (400)
....+++++++...+...+...|....++..+ ++++.+.. |+.| +.++.|.+|
T Consensus 203 ---------------~i~pG~tE~elaa~~~~~~~~~g~~~~~~~~~------v~~G~~~~~h~~~~~~~l~~Gd~v~~d 261 (405)
T PRK14576 203 ---------------KIRVGCTAAELTAAFKAAVMSFPETNFSRFNL------ISVGDNFSPKIIADTTPAKVGDLIKFD 261 (405)
T ss_pred ---------------hccCCCCHHHHHHHHHHHHHHcCCCcCCCCCE------EEECCcccCCCCCCCcccCCCCEEEEE
Confidence 12256788888777766654444321121122 34454433 5444 568899999
Q ss_pred CCcccHHHHhccCCCceeecCChhHHHHhcCCH-HHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccc
Q 015779 281 PNSCSYALYSKLNSDKVLLQQSPLALAKAIKNP-VELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLE 353 (400)
Q Consensus 281 ~~~~~~~~y~~l~~~~~~~~~~~i~~lRaiK~~-~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~ 353 (400)
.+ +.+.+|.+-.. +.+..+.|-+.+|.+-+. .|...---+..++|+.+.++...... ....+|+..|+.+
T Consensus 262 ~g-~~~~GY~sd~t-RT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~-~~~~~G~~~~~~~ 332 (405)
T PRK14576 262 CG-IDVAGYGADLA-RTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMA-VIKTSGLPHYNRG 332 (405)
T ss_pred ec-eeECCEEeeee-EEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH-HHHHcCCccccCC
Confidence 98 67888865432 334444565666553333 33322223457777777777665553 3345677666654
No 13
>PRK10879 proline aminopeptidase P II; Provisional
Probab=99.34 E-value=1.3e-11 Score=124.88 Aligned_cols=188 Identities=11% Similarity=0.141 Sum_probs=122.2
Q ss_pred ccHHHHHHHHHHHHhhcCCcEEEEeCc---------------cccccccCCCCCCCCCCccceeEEEEECC-----ceEE
Q 015779 166 SSVVEKLKELREKLTNEKARGIIITTL---------------DEVAWLYNIRGTDVPYCPVVHAFAIVTTN-----AAFL 225 (400)
Q Consensus 166 ~s~~~ki~~lr~~l~~~~~dallit~~---------------~ni~yltg~rG~d~~~~p~~~~~lli~~~-----~~~l 225 (400)
..+..|++++.+.|.... -+++.+.. .|.+||||+.--+ +.+++.++ +.+|
T Consensus 4 ~~~~~rR~~l~~~~~~~~-~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~--------~~lv~~~~~~~~~~~~L 74 (438)
T PRK10879 4 QEFQRRRQALLAKMQPGS-AALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPE--------AVLVLIKSDDTHNHSVL 74 (438)
T ss_pred HHHHHHHHHHHhhCCCCc-EEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCC--------eEEEEecCCCCCCeEEE
Confidence 457788999988886432 22333322 4789999997332 45555321 3578
Q ss_pred eecCccccHH--------HHHHhhcCCcE-EEeCccHHHHHHHHHhcCCCCCCCCCCCcEEEECCCcc------cHHHHh
Q 015779 226 YVDKRKVSSE--------VISFLKESGVE-VRDYDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSC------SYALYS 290 (400)
Q Consensus 226 ~vd~r~~~~~--------~~~~~~~~g~~-~~~~~~i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~~------~~~~y~ 290 (400)
|++++.-..+ .+......|++ +.+++.+.+.|..+..+ ...+..+.+.. ....+.
T Consensus 75 f~~~~d~~~e~W~G~~~~~~~a~~~~g~d~v~~~~~l~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 144 (438)
T PRK10879 75 FNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALPFSEINQQLYQLLNG----------LDVVYHAQGEYAYADEIVFSALE 144 (438)
T ss_pred EeCCCCCCccEEcCcCCCHHHHHHHhCCCEEeeHHHHHHHHHHHhcC----------CceEEecCCccccchhHHHHHHH
Confidence 8877654321 11111224654 66677777777666532 23344443321 111122
Q ss_pred ccC---------CCceeecCChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccc
Q 015779 291 KLN---------SDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKK 361 (400)
Q Consensus 291 ~l~---------~~~~~~~~~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 361 (400)
.+. ...+++....+..+|+||++.||+.||+|+.+.+.++...+..++
T Consensus 145 ~~~~~~~~~~~~~~~~~d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~----------------------- 201 (438)
T PRK10879 145 KLRKGSRQNLTAPATLTDWRPWVHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCR----------------------- 201 (438)
T ss_pred HHHhhhccccCCcccchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcC-----------------------
Confidence 111 113445566789999999999999999999999999988876554
Q ss_pred cCCCCCCCHHHHHHHHHHHHhhCCCCCCCCccccccccC
Q 015779 362 HSGTVKLTEVTVSDKLESFRASKEVMLTSIFPKYIICCQ 400 (400)
Q Consensus 362 ~~~~~g~tE~~~a~~l~~~~~~~~~~~~~SF~tIva~~~ 400 (400)
+|+||+++++.+++....+ |+..++|+|||++|.
T Consensus 202 ----pG~tE~ei~a~~~~~~~~~-G~~~~~~~~iv~~G~ 235 (438)
T PRK10879 202 ----PGMFEYQLEGEIHHEFNRH-GARYPSYNTIVGSGE 235 (438)
T ss_pred ----CCCcHHHHHHHHHHHHHHC-CCCCCCCCcEEEEcC
Confidence 6999999999999877766 788899999999983
No 14
>PF01321 Creatinase_N: Creatinase/Prolidase N-terminal domain; InterPro: IPR000587 Creatinase or creatine amidinohydrolase (3.5.3.3 from EC) catalyses the conversion of creatine and water to sarcosine and urea. The enzyme works as a homodimer, and is induced by choline chloride. Each monomer of creatinase has two clearly defined domains, a small N-terminal domain, and a large C-terminal domain. The structure of the C-terminal region represents the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. ; GO: 0016787 hydrolase activity; PDB: 1PV9_A 3CTZ_A 3IL0_B 3PN9_A 2HOW_A 1WN1_B 3I7M_A 1CHM_B 3QOC_D 1KP0_B ....
Probab=99.29 E-value=3.1e-11 Score=101.47 Aligned_cols=127 Identities=18% Similarity=0.251 Sum_probs=88.3
Q ss_pred HHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEE-EECCceEEeecCccccHHHHHHhhcCCcEEEe
Q 015779 171 KLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAI-VTTNAAFLYVDKRKVSSEVISFLKESGVEVRD 249 (400)
Q Consensus 171 ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~ll-i~~~~~~l~vd~r~~~~~~~~~~~~~g~~~~~ 249 (400)
|++++|+.|++.++|++++++++|++||||++. .+.++ ++++ |+.++.+++++..+........ ....++..
T Consensus 1 Rl~rl~~~m~~~gid~lll~~~~ni~YltG~~~--~~~~~---~~~l~i~~~~~~l~~~~~~~~~~~~~~--~~~~~v~~ 73 (132)
T PF01321_consen 1 RLERLRAAMAEAGIDALLLTSPENIRYLTGFRW--QPGER---PVLLVITADGAVLFVPKGEYERAAEES--APDDEVVE 73 (132)
T ss_dssp HHHHHHHHHHHTT-SEEEEESHHHHHHHHS--S--T-TSS---EEEEEEESSSEEEEEEGGGHHHHHHHH--TTSSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEcChhhceEecCCCc--CCCcc---eEEEEecccCcEEEeccccHHHHHHhh--cCCceEEE
Confidence 789999999999999999999999999999951 12222 3444 8888889999955444333332 25677888
Q ss_pred CccHHHHHHHHHhcCCCCCCCCCCCcEEEECCCcccHHHHhcc----CCCceeecCChhHHHHhc
Q 015779 250 YDAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSKL----NSDKVLLQQSPLALAKAI 310 (400)
Q Consensus 250 ~~~i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~~~~~~y~~l----~~~~~~~~~~~i~~lRai 310 (400)
|.+..+.+..+..... ....+|++|.+.+++..|..+ ++.++++.++++..+|+|
T Consensus 74 ~~~~~~~~~~~l~~~~------~~~~~igve~~~~~~~~~~~l~~~~~~~~~v~~~~~i~~~R~I 132 (132)
T PF01321_consen 74 YEDPYEAIAEALKKLG------PEGKRIGVEPDSLSAAEYQRLQEALPGAEFVDASPLIEELRMI 132 (132)
T ss_dssp ESTHHHHHHHHHHHHT------TTTSEEEEETTTSBHHHHHHHHHHSTTSEEEEEHHHHHHHHTS
T ss_pred EecccchHHHHHHHhC------CCCCEEEEcCCcChHHHHHHHHHhCCCCEEEEcHHHHHHcCcC
Confidence 7763333333332211 134899999988899988765 445899999999999986
No 15
>PRK15173 peptidase; Provisional
Probab=98.88 E-value=1.2e-08 Score=99.44 Aligned_cols=99 Identities=17% Similarity=0.034 Sum_probs=78.3
Q ss_pred CCcEEEECCCcccHHHHhccCC----CceeecCChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 015779 273 GSDLIWADPNSCSYALYSKLNS----DKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGAS 348 (400)
Q Consensus 273 ~~~~v~id~~~~~~~~y~~l~~----~~~~~~~~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~ 348 (400)
...+|++|.+.+++..+..+.. .++++...++..+|+||++.||+.||+|..+.+.++......++
T Consensus 54 ~~~rigve~~~~~~~~~~~l~~~l~~~~~~d~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~---------- 123 (323)
T PRK15173 54 LNKKIAIDLNIMSNGGKRVIDAVMPNVDFVDSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIR---------- 123 (323)
T ss_pred cCCEEEEecCccCHHHHHHHHhhCCCCeEEEhHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHcc----------
Confidence 3568999988788888877643 36788888999999999999999999999988888887766555
Q ss_pred ccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcccccccc
Q 015779 349 GYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVMLTSIFPKYIICC 399 (400)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~~~SF~tIva~~ 399 (400)
+|+||.|++..++...... +..+.++.+|+++|
T Consensus 124 -----------------~G~tE~el~a~~~~~~~~~-g~~~~~~~~~i~~G 156 (323)
T PRK15173 124 -----------------VGCTSAELTAAYKAAVMSK-SETHFSRFHLISVG 156 (323)
T ss_pred -----------------CCCCHHHHHHHHHHHHHHc-CCCCCCCCcEEEEC
Confidence 6999999999998766654 45444444566655
No 16
>PRK10879 proline aminopeptidase P II; Provisional
Probab=98.67 E-value=6.8e-08 Score=97.92 Aligned_cols=267 Identities=13% Similarity=0.125 Sum_probs=147.0
Q ss_pred HHHHHHHHHHhhcCCCCceEEEEcCCCCC----CcccccCccccceecccccccceEEEEeCC-----ceEEEEecccH-
Q 015779 2 AEILAALRSLMSSHDPPLHALVVPSEDYH----QSEYVSARDKRREFVSGFTGSAGLALITMN-----EALLWTDGRYF- 71 (400)
Q Consensus 2 ~~Rl~~lr~~m~~~~~~lDa~li~~~D~h----~~e~~~~~~~~~~yltGf~gs~g~~li~~~-----~a~l~vd~Ry~- 71 (400)
..|.++|.+.|.+. .++||++.++. ..+|.=-.+.+.+|||||.--.+++|+.++ +.+||++.+--
T Consensus 7 ~~rR~~l~~~~~~~----~~~v~~~~~~~~~~~d~~y~Frq~s~F~YltG~~ep~~~lv~~~~~~~~~~~~Lf~~~~d~~ 82 (438)
T PRK10879 7 QRRRQALLAKMQPG----SAALIFAAPEATRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLT 82 (438)
T ss_pred HHHHHHHHhhCCCC----cEEEEeCCCccccCCCCCCCccCCCceeeeeCCCCCCeEEEEecCCCCCCeEEEEeCCCCCC
Confidence 46777787777542 36677666544 345666667899999999954455555332 25788865532
Q ss_pred -----------HHHHhhccCCEEEEEcCCCCCHHHHHhccCCCCCEEEECCCc------ccHHHHHHHHHHHhh---cCC
Q 015779 72 -----------LQATQELTGEWKLMRMLEDPAVDVWMANNLPNDAAIGVDPWC------VSIDTAQRWERAFAK---KQQ 131 (400)
Q Consensus 72 -----------~qa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~vg~d~~~------~s~~~~~~l~~~l~~---~~~ 131 (400)
+.|++...-+ ++... ..+.+.|...+.....+-.+... .....++.+...... ...
T Consensus 83 ~e~W~G~~~~~~~a~~~~g~d-~v~~~---~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (438)
T PRK10879 83 AEIWFGRRLGQDAAPEKLGVD-RALPF---SEINQQLYQLLNGLDVVYHAQGEYAYADEIVFSALEKLRKGSRQNLTAPA 158 (438)
T ss_pred ccEEcCcCCCHHHHHHHhCCC-EEeeH---HHHHHHHHHHhcCCceEEecCCccccchhHHHHHHHHHHhhhccccCCcc
Confidence 2222222111 12211 12334454444443444444322 112233333322211 012
Q ss_pred eEEeCCcChhhhhhhcCCCCCCCCcccccccccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCcc
Q 015779 132 KLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPV 211 (400)
Q Consensus 132 ~~~~~~~~lid~ir~~K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~ 211 (400)
.++++ ..++.++|.+|++.| |+.+|++.+-. +..+ ....
T Consensus 159 ~~~d~-~~~l~~lR~iKs~~E-------------------I~~~r~A~~i~--~~a~----~~~~--------------- 197 (438)
T PRK10879 159 TLTDW-RPWVHEMRLFKSPEE-------------------IAVLRRAGEIS--ALAH----TRAM--------------- 197 (438)
T ss_pred cchHH-HHHHHHHHhcCCHHH-------------------HHHHHHHHHHH--HHHH----HHHH---------------
Confidence 45555 678899999999999 99999764321 1111 0000
Q ss_pred ceeEEEEECCceEEeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcc
Q 015779 212 VHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSC 284 (400)
Q Consensus 212 ~~~~lli~~~~~~l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~ 284 (400)
.....++.+.++...+...+...|.....|..+ ++++.+++ |..+ +.++.|.+|.+ +
T Consensus 198 ---------~~~~pG~tE~ei~a~~~~~~~~~G~~~~~~~~i------v~~G~na~~~H~~~~~~~l~~GDlVliD~G-~ 261 (438)
T PRK10879 198 ---------EKCRPGMFEYQLEGEIHHEFNRHGARYPSYNTI------VGSGENGCILHYTENESEMRDGDLVLIDAG-C 261 (438)
T ss_pred ---------HhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCcE------EEEcCccccccCCCCccccCCCCEEEEEeC-e
Confidence 001145677777766666666667665667665 67777766 8665 46899999998 7
Q ss_pred cHHHHhccCCCceeec-CChhHHHHhcCCHHHHhhHHH-HHHHHHHHHHHHH
Q 015779 285 SYALYSKLNSDKVLLQ-QSPLALAKAIKNPVELDGLKK-AHIRDGAAIVQYI 334 (400)
Q Consensus 285 ~~~~y~~l~~~~~~~~-~~~i~~lRaiK~~~EI~~mr~-A~~~d~~a~~~~l 334 (400)
.+.+|.+--. +.+.+ +.+-..+|.+-+.+.-..-.. +..++|+.+.++-
T Consensus 262 ~~~GY~sDit-RT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~ 312 (438)
T PRK10879 262 EYKGYAGDIT-RTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVT 312 (438)
T ss_pred EECCEEEEeE-EEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 7788865332 33333 455566666655443333222 2356665555543
No 17
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=98.41 E-value=2e-06 Score=83.11 Aligned_cols=206 Identities=17% Similarity=0.147 Sum_probs=119.9
Q ss_pred cCCCCCCCCcccccccc----cCccHHHHHHHHHHHHhhcCCcEEEEeCc---------------cccccccCCCCCCCC
Q 015779 147 NRPPVETYPVTVQQIEF----AGSSVVEKLKELREKLTNEKARGIIITTL---------------DEVAWLYNIRGTDVP 207 (400)
Q Consensus 147 ~K~~~e~~~i~~~~~~~----~G~s~~~ki~~lr~~l~~~~~dallit~~---------------~ni~yltg~rG~d~~ 207 (400)
..|....+|-.+.|-+. +-.++.+|..+|.+.+.++ +-.++.+++ .|.+||||+.-.|
T Consensus 42 GQpt~~thPhli~pgEltPgis~~Ey~~RR~rl~~ll~~~-a~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~-- 118 (488)
T KOG2414|consen 42 GQPTSVTHPHLIQPGELTPGISATEYKERRSRLMSLLPAN-AMVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPD-- 118 (488)
T ss_pred CCCCCCCCccccCCCCcCCCccHHHHHHHHHHHHHhCCcc-cEEEEccCchhhhcCccceeeecCCCeEEEeccCCCC--
Confidence 34555556655555433 3356678888888887654 334444444 4777888887544
Q ss_pred CCccceeEEEEE-CC----ceEEeecCccccHHHHHHhhcCCcEEE----------eCccHHHHHHHHHhcCCCCCCCCC
Q 015779 208 YCPVVHAFAIVT-TN----AAFLYVDKRKVSSEVISFLKESGVEVR----------DYDAVSSDVVLLQSNQLNPPADVQ 272 (400)
Q Consensus 208 ~~p~~~~~lli~-~~----~~~l~vd~r~~~~~~~~~~~~~g~~~~----------~~~~i~~~l~~l~~~~~~~h~~~~ 272 (400)
+.+++. .+ ...+|++++.-..+.=+-. ..|.... +-..+...|.....
T Consensus 119 ------~vl~l~~~d~~s~~~~lf~p~kdP~~e~WeG~-rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~---------- 181 (488)
T KOG2414|consen 119 ------AVLLLLKGDERSVAYDLFMPPKDPTAELWEGP-RTGTDGASEIFGVDEAYPLSGLAVFLPKMSA---------- 181 (488)
T ss_pred ------eeEEEeecccccceeeEecCCCCccHHhhcCc-cccchhhhhhhcchhhcchhhHHHHHHHHHh----------
Confidence 445553 22 1346776654332110000 1121111 00111222222221
Q ss_pred CCcEEEECCCcccH-HHH---hccC-----CCceeecCChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015779 273 GSDLIWADPNSCSY-ALY---SKLN-----SDKVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQE 343 (400)
Q Consensus 273 ~~~~v~id~~~~~~-~~y---~~l~-----~~~~~~~~~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~ 343 (400)
....++.|...... ..+ +.+. ..++..+.+.++.+|.||++.|++.||+|+.+.+++|.+.+.--
T Consensus 182 ~~~~i~~d~~ss~a~s~~~~~~dl~~~~~~~~~~~~~~~li~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~s------ 255 (488)
T KOG2414|consen 182 LLYKIWQDKASSKASSALKNMQDLLGFQSKSSTVRPVSNLIERLRLIKSPAELELMREACNIASQTFSETMFGS------ 255 (488)
T ss_pred hhhhhhhhhccchhhhHHHHHHhhhhhcccCcccccHHHHHHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhc------
Confidence 23456666542211 111 1111 12477788899999999999999999999999988765543211
Q ss_pred hhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCCCCCccccccccC
Q 015779 344 IYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVMLTSIFPKYIICCQ 400 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~~~SF~tIva~~~ 400 (400)
.....|..+.+++++--+.. |++.++|+|.||.|.
T Consensus 256 ---------------------r~~~~E~~l~a~~eye~r~r-Gad~~AYpPVVAgG~ 290 (488)
T KOG2414|consen 256 ---------------------RDFHNEAALSALLEYECRRR-GADRLAYPPVVAGGK 290 (488)
T ss_pred ---------------------cCCcchhhHhhhhhhheeec-CccccccCCeeecCc
Confidence 13678999999999766654 899999999999883
No 18
>PRK13607 proline dipeptidase; Provisional
Probab=98.40 E-value=7.8e-07 Score=90.21 Aligned_cols=70 Identities=13% Similarity=0.030 Sum_probs=57.3
Q ss_pred ChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHH
Q 015779 302 SPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR 381 (400)
Q Consensus 302 ~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~ 381 (400)
..+..+|+||++.||+.||+|+.+.+.++......++ +|+||.|++..+..
T Consensus 153 ~~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~---------------------------pG~tE~ei~~~~~~-- 203 (443)
T PRK13607 153 DYLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFR---------------------------AGMSEFDINLAYLT-- 203 (443)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------------cCCCHHHHHHHHHH--
Confidence 5689999999999999999999999888877766555 69999999986543
Q ss_pred hhCCCCCCCCccccccccC
Q 015779 382 ASKEVMLTSIFPKYIICCQ 400 (400)
Q Consensus 382 ~~~~~~~~~SF~tIva~~~ 400 (400)
....+..+.+|++||++|.
T Consensus 204 ~~~~~~~~~~y~~iva~G~ 222 (443)
T PRK13607 204 ATGQRDNDVPYGNIVALNE 222 (443)
T ss_pred HhCCCCcCCCCCcEEEecC
Confidence 2223567799999999973
No 19
>PRK07281 methionine aminopeptidase; Reviewed
Probab=98.25 E-value=1.8e-06 Score=82.48 Aligned_cols=64 Identities=9% Similarity=0.055 Sum_probs=52.8
Q ss_pred hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCC---
Q 015779 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKE--- 385 (400)
Q Consensus 309 aiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~--- 385 (400)
.+|++.||+.||+|..+...++..+..+++ +|+||+|++..++++.++.+
T Consensus 3 ~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~---------------------------pG~te~ei~~~~~~~~~~~g~~~ 55 (286)
T PRK07281 3 TLKSAREIEAMDRAGDFLASIHIGLRDLIK---------------------------PGVDMWEVEEYVRRRCKEENVLP 55 (286)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHCc---------------------------CCCcHHHHHHHHHHHHHHcCCcc
Confidence 689999999999999888888877666555 69999999999998877652
Q ss_pred ---CCC--CCCcccccccc
Q 015779 386 ---VML--TSIFPKYIICC 399 (400)
Q Consensus 386 ---~~~--~~SF~tIva~~ 399 (400)
|+. ..+|++|++||
T Consensus 56 ~~~G~~~~~~~f~~~v~~G 74 (286)
T PRK07281 56 LQIGVDGAMMDYPYATCCG 74 (286)
T ss_pred cccCCCCcccCCCcceEEe
Confidence 122 37999999987
No 20
>PRK15173 peptidase; Provisional
Probab=98.13 E-value=1.3e-06 Score=85.15 Aligned_cols=189 Identities=11% Similarity=0.061 Sum_probs=111.3
Q ss_pred CCEEEECCCcccHHHHHHHHHHHhhcCCeEEeCCcChhhhhhhcCCCCCCCCcccccccccCccHHHHHHHHHHHHhhcC
Q 015779 104 DAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEK 183 (400)
Q Consensus 104 ~~~vg~d~~~~s~~~~~~l~~~l~~~~~~~~~~~~~lid~ir~~K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~~ 183 (400)
.++||+|...++...++.|++.++. +++++. .++++++|.+|++.| |+.+|++.+-
T Consensus 55 ~~rigve~~~~~~~~~~~l~~~l~~--~~~~d~-~~~i~~lR~iKs~~E-------------------I~~mr~A~~i-- 110 (323)
T PRK15173 55 NKKIAIDLNIMSNGGKRVIDAVMPN--VDFVDS-SSIFNELRVIKSPWE-------------------IKRLRKSAEI-- 110 (323)
T ss_pred CCEEEEecCccCHHHHHHHHhhCCC--CeEEEh-HHHHHHHHccCCHHH-------------------HHHHHHHHHH--
Confidence 4699999999999999999988753 688887 789999999999999 9999986431
Q ss_pred CcEEEEeCccccccccCCCCCCCCCCccceeEEEEECCceEEeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhc
Q 015779 184 ARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSN 263 (400)
Q Consensus 184 ~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~~~~l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~ 263 (400)
++..+-... +....++++.++...+...+...+.....+..+ +..+
T Consensus 111 ~~~~~~~~~----------------------------~~i~~G~tE~el~a~~~~~~~~~g~~~~~~~~~------i~~G 156 (323)
T PRK15173 111 TEYGITEAS----------------------------KLIRVGCTSAELTAAYKAAVMSKSETHFSRFHL------ISVG 156 (323)
T ss_pred HHHHHHHHH----------------------------HHccCCCCHHHHHHHHHHHHHHcCCCCCCCCcE------EEEC
Confidence 111110000 011135667777665554443333221111111 2223
Q ss_pred CCCC-CCCC-----CCCcEEEECCCcccHHHHhccCCCceeecCChhHHHHhcCCHHHHhhHHH-HHHHHHHHHHHHHHH
Q 015779 264 QLNP-PADV-----QGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKNPVELDGLKK-AHIRDGAAIVQYIIW 336 (400)
Q Consensus 264 ~~~~-h~~~-----~~~~~v~id~~~~~~~~y~~l~~~~~~~~~~~i~~lRaiK~~~EI~~mr~-A~~~d~~a~~~~l~~ 336 (400)
.+.. |..+ +.++.|.+|.+ +.+.+|.+-- ++.+.++.|-..+|.+-+...-..... +.+++|+.+.++...
T Consensus 157 ~~~~~h~~~~~~~l~~Gd~V~iD~g-~~~~GY~aDi-tRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a 234 (323)
T PRK15173 157 ADFSPKLIPSNTKACSGDLIKFDCG-VDVDGYGADI-ARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDS 234 (323)
T ss_pred CCCccCCCCCCCccCCCCEEEEEeC-ccCCCEeeee-EEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 2222 4333 46789999987 6788886533 244444556666665554433332222 346777777666655
Q ss_pred HHHHhhhhhccCccccc
Q 015779 337 LDKQMQEIYGASGYFLE 353 (400)
Q Consensus 337 l~~~~~~~~~~~~~~~~ 353 (400)
....+ ..+|+..|+.|
T Consensus 235 ~~~~~-~~~G~~~~~~~ 250 (323)
T PRK15173 235 TMEVI-KKSGLPNYNRG 250 (323)
T ss_pred HHHHH-HHcCCccccCC
Confidence 44333 34566655543
No 21
>PRK12897 methionine aminopeptidase; Reviewed
Probab=98.10 E-value=6.7e-06 Score=77.15 Aligned_cols=63 Identities=13% Similarity=0.116 Sum_probs=53.0
Q ss_pred hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCC
Q 015779 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVML 388 (400)
Q Consensus 309 aiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~ 388 (400)
.||++.||+.||+|+.+.+.++......++ +|+||.|++..+++.+.++ |+.
T Consensus 3 ~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~---------------------------~G~tE~el~~~~~~~~~~~-G~~ 54 (248)
T PRK12897 3 TIKTKNEIDLMHESGKLLASCHREIAKIMK---------------------------PGITTKEINTFVEAYLEKH-GAT 54 (248)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHhhcC---------------------------CCCcHHHHHHHHHHHHHHc-CCc
Confidence 689999999999999999888877765554 6999999999999988876 565
Q ss_pred C-----CCcccccccc
Q 015779 389 T-----SIFPKYIICC 399 (400)
Q Consensus 389 ~-----~SF~tIva~~ 399 (400)
+ .+|++++++|
T Consensus 55 ~~~~~~~~~~~~i~~g 70 (248)
T PRK12897 55 SEQKGYNGYPYAICAS 70 (248)
T ss_pred ccccccCCCCcceEec
Confidence 3 5898887765
No 22
>PRK12318 methionine aminopeptidase; Provisional
Probab=98.09 E-value=5.9e-06 Score=79.31 Aligned_cols=69 Identities=14% Similarity=0.098 Sum_probs=55.1
Q ss_pred hhHHHHh-cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHH
Q 015779 303 PLALAKA-IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR 381 (400)
Q Consensus 303 ~i~~lRa-iK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~ 381 (400)
.+..+|. ||++.||+.||+|+.+.+.++..++..++ +|+||.|+++..+.+.
T Consensus 35 ~~~~~~i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~ir---------------------------pG~tE~Eiaa~~~~~~ 87 (291)
T PRK12318 35 YASQYDIIIKTPEQIEKIRKACQVTARILDALCEAAK---------------------------EGVTTNELDELSRELH 87 (291)
T ss_pred ccCCCceEECCHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------CCCCHHHHHHHHHHHH
Confidence 3445655 99999999999999999888888776555 6999999999888777
Q ss_pred hhCCCC-------CCCCcccccccc
Q 015779 382 ASKEVM-------LTSIFPKYIICC 399 (400)
Q Consensus 382 ~~~~~~-------~~~SF~tIva~~ 399 (400)
+.. |+ .+++|++++++|
T Consensus 88 ~~~-G~~~~~~~~~~~~f~~~v~~g 111 (291)
T PRK12318 88 KEY-NAIPAPLNYGSPPFPKTICTS 111 (291)
T ss_pred HHc-CCCccccccCCCCCCcceEee
Confidence 655 43 246899988776
No 23
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=97.97 E-value=4.3e-05 Score=73.33 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=61.5
Q ss_pred hhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHh
Q 015779 303 PLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRA 382 (400)
Q Consensus 303 ~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~ 382 (400)
.+.+.|.||++.||+-||.|+.+.+.|-.++...+. +|+.|+++....++.--
T Consensus 178 ~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~---------------------------pg~~Eyq~eslF~hh~y 230 (492)
T KOG2737|consen 178 ILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVR---------------------------PGMKEYQLESLFLHHSY 230 (492)
T ss_pred HHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCC---------------------------chHhHHhHHHHHHHhhh
Confidence 468899999999999999999998888766665444 69999999999998777
Q ss_pred hCCCCCCCCccccccccC
Q 015779 383 SKEVMLTSIFPKYIICCQ 400 (400)
Q Consensus 383 ~~~~~~~~SF~tIva~~~ 400 (400)
.++|....|+..|.+||.
T Consensus 231 ~~GGcRh~sYtcIc~sG~ 248 (492)
T KOG2737|consen 231 SYGGCRHLSYTCICASGD 248 (492)
T ss_pred ccCCccccccceeeecCC
Confidence 788889999999999983
No 24
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=97.88 E-value=2.6e-05 Score=71.99 Aligned_cols=60 Identities=33% Similarity=0.629 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCC--CCHHHHHHHHHHHHhhCCCCCCCCcccc
Q 015779 318 GLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVK--LTEVTVSDKLESFRASKEVMLTSIFPKY 395 (400)
Q Consensus 318 ~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~tE~~~a~~l~~~~~~~~~~~~~SF~tI 395 (400)
+||.|++++++.+.+.+.+++..+. +| +||+|+++.++++++..+++.+++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i~-----------------------~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~ 57 (224)
T cd01085 1 GMRAAHIRDGVALVEFLAWLEQEVP-----------------------KGETITELSAADKLEEFRRQQKGYVGLSFDTI 57 (224)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhc-----------------------cCCCEeHHHHHHHHHHHHHHcCCCcCCCcceE
Confidence 5899999999999999999987665 68 9999999999998887766778999999
Q ss_pred ccccC
Q 015779 396 IICCQ 400 (400)
Q Consensus 396 va~~~ 400 (400)
|++|.
T Consensus 58 v~~g~ 62 (224)
T cd01085 58 SGFGP 62 (224)
T ss_pred EEecC
Confidence 99873
No 25
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.87 E-value=3.5e-05 Score=72.16 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=51.1
Q ss_pred hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCC
Q 015779 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVML 388 (400)
Q Consensus 309 aiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~ 388 (400)
+||++.||+.||+|+.+.+.++...+..++ +|+||.|++..+++.+.+. |+.
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~---------------------------~G~tE~el~~~~~~~~~~~-G~~ 53 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVK---------------------------PGVSTKELDRIAKDFIEKH-GAK 53 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------CCCCHHHHHHHHHHHHHHC-CCC
Confidence 689999999999999999888877766554 6999999999999888876 543
Q ss_pred C-----CCcccccccc
Q 015779 389 T-----SIFPKYIICC 399 (400)
Q Consensus 389 ~-----~SF~tIva~~ 399 (400)
. .+|++++++|
T Consensus 54 ~~~~~~~~~~~~~~~~ 69 (247)
T TIGR00500 54 PAFLGYYGFPGSVCIS 69 (247)
T ss_pred ccccCCCCCCceeEec
Confidence 2 3688776654
No 26
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=97.85 E-value=1.3e-05 Score=77.57 Aligned_cols=262 Identities=15% Similarity=0.158 Sum_probs=142.4
Q ss_pred HHHHHHHHHHhhcCCCCceEEEEcC-CCCCCcc---cccCccccceecccccccceEEEEeC-C----ceEEEEeccc--
Q 015779 2 AEILAALRSLMSSHDPPLHALVVPS-EDYHQSE---YVSARDKRREFVSGFTGSAGLALITM-N----EALLWTDGRY-- 70 (400)
Q Consensus 2 ~~Rl~~lr~~m~~~~~~lDa~li~~-~D~h~~e---~~~~~~~~~~yltGf~gs~g~~li~~-~----~a~l~vd~Ry-- 70 (400)
..|..+|-+.+.++ +.+||.+ +--|+|- |+=-.+.+.+||||+.-.++.+++.+ + ...||++++.
T Consensus 68 ~~RR~rl~~ll~~~----a~~il~sap~~~msg~ipY~f~Qd~df~YLtGc~EP~~vl~l~~~d~~s~~~~lf~p~kdP~ 143 (488)
T KOG2414|consen 68 KERRSRLMSLLPAN----AMVILGSAPVKYMSGAIPYTFRQDNDFYYLTGCLEPDAVLLLLKGDERSVAYDLFMPPKDPT 143 (488)
T ss_pred HHHHHHHHHhCCcc----cEEEEccCchhhhcCccceeeecCCCeEEEeccCCCCeeEEEeecccccceeeEecCCCCcc
Confidence 56888888888764 3555544 4445554 33345689999999998888887752 2 2568887764
Q ss_pred HHHHHhhccC---CEEEEEcCCCCC---HHHHHhccCCCCCEEEECCCcccH-HHHHHHHHHHh--hcCCeEEeCCcChh
Q 015779 71 FLQATQELTG---EWKLMRMLEDPA---VDVWMANNLPNDAAIGVDPWCVSI-DTAQRWERAFA--KKQQKLVQTSTNLV 141 (400)
Q Consensus 71 ~~qa~~~~~~---~~~~~~~~~~~~---~~~~l~~~l~~~~~vg~d~~~~s~-~~~~~l~~~l~--~~~~~~~~~~~~li 141 (400)
.+.-+....+ ..++....+.-+ +...|.+.......|-+|....+. +.++.++..+. .++-+++++ .+++
T Consensus 144 ~e~WeG~rtG~~~a~~if~v~ea~~~s~l~~~L~k~~~~~~~i~~d~~ss~a~s~~~~~~dl~~~~~~~~~~~~~-~~li 222 (488)
T KOG2414|consen 144 AELWEGPRTGTDGASEIFGVDEAYPLSGLAVFLPKMSALLYKIWQDKASSKASSALKNMQDLLGFQSKSSTVRPV-SNLI 222 (488)
T ss_pred HHhhcCccccchhhhhhhcchhhcchhhHHHHHHHHHhhhhhhhhhhccchhhhHHHHHHhhhhhcccCcccccH-HHHH
Confidence 2221111111 122222112111 112222111112345666443322 33444444432 222347777 8999
Q ss_pred hhhhhcCCCCCCCCcccccccccCccHHHHHHHHHHHHhhcCCcEEEEeCccccccccCCCCCCCCCCccceeEEEEECC
Q 015779 142 DKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDEVAWLYNIRGTDVPYCPVVHAFAIVTTN 221 (400)
Q Consensus 142 d~ir~~K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~ni~yltg~rG~d~~~~p~~~~~lli~~~ 221 (400)
.++|.+|++.| ++.+|++-+ +--..+-+. ..+-|
T Consensus 223 ~~lRlIKSpaE-------------------l~~Mr~a~~------I~sq~~~~~--m~~sr------------------- 256 (488)
T KOG2414|consen 223 ERLRLIKSPAE-------------------LELMREACN------IASQTFSET--MFGSR------------------- 256 (488)
T ss_pred HHHHccCCHHH-------------------HHHHHHHhh------hhhHHHHHH--Hhhcc-------------------
Confidence 99999999999 999987432 111101111 01111
Q ss_pred ceEEeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhccCC
Q 015779 222 AAFLYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNS 294 (400)
Q Consensus 222 ~~~l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l~~ 294 (400)
-|.+|..+.+.++.....-|.+...|..+ ++.|.|+. |.+. ..++.|++|.| |.+.+|.+.-.
T Consensus 257 ---~~~~E~~l~a~~eye~r~rGad~~AYpPV------VAgG~na~tIHY~~Nnq~l~d~emVLvDaG-celgGYvSDIT 326 (488)
T KOG2414|consen 257 ---DFHNEAALSALLEYECRRRGADRLAYPPV------VAGGKNANTIHYVRNNQLLKDDEMVLVDAG-CELGGYVSDIT 326 (488)
T ss_pred ---CCcchhhHhhhhhhheeecCccccccCCe------eecCcccceEEEeecccccCCCcEEEEecC-cccCceEccce
Confidence 24566666665666555567777778776 67776666 7543 46789999998 89999976432
Q ss_pred CceeecCChhHHHHhcCCH---HHHhhHHHHHH
Q 015779 295 DKVLLQQSPLALAKAIKNP---VELDGLKKAHI 324 (400)
Q Consensus 295 ~~~~~~~~~i~~lRaiK~~---~EI~~mr~A~~ 324 (400)
.++-.-+-..+.+|...+. +.-+.++-++-
T Consensus 327 RTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~ 359 (488)
T KOG2414|consen 327 RTWPISGKFSDAQRDLYEAVLQVQEECIKYCKP 359 (488)
T ss_pred eccCCCCccCcHHHHHHHHHHHHHHHHHHhhcC
Confidence 2333223333445544443 23344444443
No 27
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.74 E-value=6.1e-05 Score=70.81 Aligned_cols=64 Identities=17% Similarity=0.100 Sum_probs=51.1
Q ss_pred HHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCC
Q 015779 307 AKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEV 386 (400)
Q Consensus 307 lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~ 386 (400)
+++||++.||+.||+|+.+.+.++...+..++ +|+||.|++..+...+... |
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~---------------------------pG~te~el~~~~~~~~~~~-G 58 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMGKAVE---------------------------PGMTTKELDRIAEKRLEEH-G 58 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHHhhcc---------------------------CCCCHHHHHHHHHHHHHHC-C
Confidence 45799999999999999999888887776555 6999999999999887765 4
Q ss_pred CC-----CCCccccccc
Q 015779 387 ML-----TSIFPKYIIC 398 (400)
Q Consensus 387 ~~-----~~SF~tIva~ 398 (400)
+. ..+|++++++
T Consensus 59 ~~~~~~~~~~~~~~~~~ 75 (255)
T PRK12896 59 AIPSPEGYYGFPGSTCI 75 (255)
T ss_pred CEeCcccCCCCCcceEe
Confidence 54 3457766544
No 28
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.66 E-value=8.7e-05 Score=73.98 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=55.0
Q ss_pred hHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhh
Q 015779 304 LALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS 383 (400)
Q Consensus 304 i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~ 383 (400)
+...|.||++.||+.||+|+.+...++......++ +|+||.|++..+.....+
T Consensus 131 ~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~ir---------------------------pGvTe~EI~~~v~~~~~~ 183 (396)
T PLN03158 131 LQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIK---------------------------PGVTTDEIDRVVHEATIA 183 (396)
T ss_pred cccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHcc---------------------------CCCCHHHHHHHHHHHHHH
Confidence 45679999999999999999999888887776555 699999999999988777
Q ss_pred CCCCCC----CCcccccccc
Q 015779 384 KEVMLT----SIFPKYIICC 399 (400)
Q Consensus 384 ~~~~~~----~SF~tIva~~ 399 (400)
.+++-. ..|++++.+|
T Consensus 184 ~Ga~ps~l~y~~fp~svcts 203 (396)
T PLN03158 184 AGGYPSPLNYHFFPKSCCTS 203 (396)
T ss_pred cCCccccccccCCCceeeec
Confidence 643321 3688877554
No 29
>PRK05716 methionine aminopeptidase; Validated
Probab=97.61 E-value=0.00016 Score=67.85 Aligned_cols=63 Identities=17% Similarity=0.194 Sum_probs=50.3
Q ss_pred hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCC
Q 015779 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVML 388 (400)
Q Consensus 309 aiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~ 388 (400)
+||++.||+.||+|+.+.+.++...+..++ +|+||.|++..+....... |..
T Consensus 4 ~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~---------------------------pG~se~ela~~~~~~~~~~-G~~ 55 (252)
T PRK05716 4 TIKTPEEIEKMRVAGRLAAEVLDEIEPHVK---------------------------PGVTTKELDRIAEEYIRDQ-GAI 55 (252)
T ss_pred eeCCHHHHHHHHHHHHHHHHHHHHHHHHcc---------------------------CCCCHHHHHHHHHHHHHHC-CCE
Confidence 699999999999999998888877665554 6999999999998877765 442
Q ss_pred -----CCCcccccccc
Q 015779 389 -----TSIFPKYIICC 399 (400)
Q Consensus 389 -----~~SF~tIva~~ 399 (400)
..+|++++.+|
T Consensus 56 ~~~~~~~~~~~~~~~g 71 (252)
T PRK05716 56 PAPLGYHGFPKSICTS 71 (252)
T ss_pred ecccCCCCCCcCeEec
Confidence 35777776654
No 30
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=97.45 E-value=0.00034 Score=71.19 Aligned_cols=101 Identities=20% Similarity=0.263 Sum_probs=77.8
Q ss_pred HHHHHHHHHhhcCCcEEEEeCcc------------ccccccCCCCCCCCCCccceeEEEEECCceEEeecCccccHHHHH
Q 015779 171 KLKELREKLTNEKARGIIITTLD------------EVAWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYVDKRKVSSEVIS 238 (400)
Q Consensus 171 ki~~lr~~l~~~~~dallit~~~------------ni~yltg~rG~d~~~~p~~~~~lli~~~~~~l~vd~r~~~~~~~~ 238 (400)
++.++|+.|+..+++|.++.+-| .++||+||.|+. |+++|+..++.++||.||+.+ +.+
T Consensus 11 ~~~~~~~~~~~~~i~aYi~Ps~DaH~sEy~~~~D~R~~flsGFsGsa--------g~Avit~~~a~lwtD~RY~~Q-A~~ 81 (606)
T KOG2413|consen 11 ELMRLRELMKSPPIDAYILPSTDAHQSEYIADRDERRAFLSGFSGSA--------GTAVITEEEAALWTDGRYFQQ-AEQ 81 (606)
T ss_pred HHHHHHHHhcCCCceEEEccCCchhhhhhhcchhhhhhhhcccCCCc--------ceEEEecCcceEEEccHHHHH-HHh
Confidence 48889999999999999998764 578999999998 999999999999999999975 666
Q ss_pred HhhcCCcEEEe--C--ccHHHHHHHHHhcCCCCCCCCCCCcEEEECCCcccHHHHhc
Q 015779 239 FLKESGVEVRD--Y--DAVSSDVVLLQSNQLNPPADVQGSDLIWADPNSCSYALYSK 291 (400)
Q Consensus 239 ~~~~~g~~~~~--~--~~i~~~l~~l~~~~~~~h~~~~~~~~v~id~~~~~~~~y~~ 291 (400)
++.. +...+. . ..+.+.|.... ..+.+||+|+.-.++..|..
T Consensus 82 qld~-~W~l~k~~~~~~~v~~wl~~~l----------~~~~~vG~Dp~Lis~~~~~~ 127 (606)
T KOG2413|consen 82 QLDS-NWTLMKMGEDVPTVEEWLAKVL----------PEGSRVGIDPTLISFDAWKQ 127 (606)
T ss_pred hhcc-cceeeeccCCCccHHHHHHHhC----------CCccccccCcceechhHHHh
Confidence 6643 344331 1 24556655554 24678999998778877754
No 31
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=97.29 E-value=0.0006 Score=68.07 Aligned_cols=64 Identities=17% Similarity=0.153 Sum_probs=53.2
Q ss_pred HhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhC---
Q 015779 308 KAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK--- 384 (400)
Q Consensus 308 RaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~--- 384 (400)
-.+||+.||+.||+|+.+...++..+..+++ +|+||+|+++..+.+..+.
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ik---------------------------pG~t~~el~~~~~~~i~~~~a~ 63 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACS---------------------------PGAKVVDICEKGDAFIMEETAK 63 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------CCCCHHHHHHHHHHHHHHhhhh
Confidence 4699999999999999999888888777665 6999999999887766652
Q ss_pred ------CCCCCCCccccccc
Q 015779 385 ------EVMLTSIFPKYIIC 398 (400)
Q Consensus 385 ------~~~~~~SF~tIva~ 398 (400)
.++.|.+|+|+++.
T Consensus 64 ~~~~~~~~~~g~afpt~vSv 83 (389)
T TIGR00495 64 IFKKEKEMEKGIAFPTCISV 83 (389)
T ss_pred hhcccccccCCCCCCeEEec
Confidence 24689999999864
No 32
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=97.20 E-value=0.0009 Score=67.74 Aligned_cols=63 Identities=10% Similarity=0.021 Sum_probs=50.1
Q ss_pred hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhC---C
Q 015779 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASK---E 385 (400)
Q Consensus 309 aiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~---~ 385 (400)
..+++.||+.||+|+.+...++..+..+++ +|+||.|++..++.++++. .
T Consensus 151 ~~~s~~EI~~~R~AaeIa~~vl~~~~~~Ik---------------------------pG~se~EIa~~ie~~ir~~~~~~ 203 (470)
T PTZ00053 151 EKLSEEQYQDLRRAAEVHRQVRRYAQSVIK---------------------------PGVKLIDICERIESKSRELIEAD 203 (470)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHhh---------------------------CCCCHHHHHHHHHHHHHHHHHhc
Confidence 347999999999999998888877776666 6999999999999765432 1
Q ss_pred CC-CCCCccccccc
Q 015779 386 VM-LTSIFPKYIIC 398 (400)
Q Consensus 386 ~~-~~~SF~tIva~ 398 (400)
|. .+++|||+++.
T Consensus 204 G~~~g~aFPt~vS~ 217 (470)
T PTZ00053 204 GLKCGWAFPTGCSL 217 (470)
T ss_pred CCcccCCCCceeec
Confidence 44 58999997753
No 33
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.92 E-value=0.0023 Score=61.58 Aligned_cols=58 Identities=10% Similarity=-0.095 Sum_probs=49.0
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCCCCCc
Q 015779 313 PVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVMLTSIF 392 (400)
Q Consensus 313 ~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~~~SF 392 (400)
-+||+.||+|..+.+.++...+.+++ +|+||.|+++.++...++. |+. ++|
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~---------------------------~G~se~el~~~~e~~~~~~-g~~-~aF 52 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIV---------------------------PGVKLLEVAEFVENRIREL-GAE-PAF 52 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCc---------------------------CCCCHHHHHHHHHHHHHHc-CCC-CCC
Confidence 47899999999999889888777665 6999999999999998876 554 899
Q ss_pred ccccccc
Q 015779 393 PKYIICC 399 (400)
Q Consensus 393 ~tIva~~ 399 (400)
||+++.+
T Consensus 53 p~~vs~n 59 (295)
T TIGR00501 53 PCNISIN 59 (295)
T ss_pred CcceecC
Confidence 9987653
No 34
>PRK13607 proline dipeptidase; Provisional
Probab=96.87 E-value=0.001 Score=67.60 Aligned_cols=64 Identities=16% Similarity=0.239 Sum_probs=38.5
Q ss_pred HHHHHHhhcCCCCceEEEEcCCCCCC-----cccccCccccceecccccccce-EEEEeC--C-ceEEEEecccH
Q 015779 6 AALRSLMSSHDPPLHALVVPSEDYHQ-----SEYVSARDKRREFVSGFTGSAG-LALITM--N-EALLWTDGRYF 71 (400)
Q Consensus 6 ~~lr~~m~~~~~~lDa~li~~~D~h~-----~e~~~~~~~~~~yltGf~gs~g-~~li~~--~-~a~l~vd~Ry~ 71 (400)
+++++.|++.+ -+++|+.+..+.. ++|+=-.+.+.+|+||+.-.++ +++|.. + +.+||.+.-+|
T Consensus 17 ~r~~~~~~~~~--~~~i~l~~g~~~~~~~~D~~~~Frq~s~F~yl~G~~~~p~~~~~i~~~~~~~~~l~~~~d~W 89 (443)
T PRK13607 17 QRTRDALAREG--LDALLIHSGELHRVFLDDHDYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYQPVDYW 89 (443)
T ss_pred HHHHHHHhccC--CCEEEEECCCcccccCCCCCCCcCcCCCcchhcCCCCCCCeEEEEEeCCCCEEEEEecCccc
Confidence 34445666655 7888887665543 3556566778889999974333 444432 2 45666653333
No 35
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.36 E-value=0.0059 Score=57.07 Aligned_cols=63 Identities=21% Similarity=0.273 Sum_probs=47.4
Q ss_pred HhhHHHHHHHHHHHHHHHHH-HHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCC------
Q 015779 316 LDGLKKAHIRDGAAIVQYII-WLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVML------ 388 (400)
Q Consensus 316 I~~mr~A~~~d~~a~~~~l~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~------ 388 (400)
++.||+|+.+...+|..++. .++..+.+ ...+||.+++++++.++... ++.
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~---------------------~~~~t~~~l~~~~e~~~~~~-~~~~~~~~~ 58 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQ---------------------EKKVTHSKLSDKVEKAIEDK-KKYKAKLDP 58 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------cccccHHHHHHHHHHHHhCc-hhhhcCCCH
Confidence 46799999998888876654 34433331 02399999999999999875 555
Q ss_pred ---CCCccccccccC
Q 015779 389 ---TSIFPKYIICCQ 400 (400)
Q Consensus 389 ---~~SF~tIva~~~ 400 (400)
+.+|+||++||.
T Consensus 59 ~~~~~~y~~iv~sG~ 73 (243)
T cd01091 59 EQLDWCYPPIIQSGG 73 (243)
T ss_pred HHcCcccCCeEeECc
Confidence 789999999983
No 36
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=93.89 E-value=0.2 Score=46.95 Aligned_cols=58 Identities=19% Similarity=0.213 Sum_probs=45.2
Q ss_pred cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhh------
Q 015779 310 IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRAS------ 383 (400)
Q Consensus 310 iK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~------ 383 (400)
+|++.||+.||+|..+...++..+...++ ||+|=+|+....+.+.++
T Consensus 5 ikt~~eiek~r~Ag~i~a~~l~~~~~~v~---------------------------pGvtt~Eld~~~~~~i~~~ga~pa 57 (255)
T COG0024 5 IKTPEEIEKMREAGKIAAKALKEVASLVK---------------------------PGVTTLELDEIAEEFIREKGAYPA 57 (255)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHcC---------------------------CCCCHHHHHHHHHHHHHHcCceeh
Confidence 89999999999999988777766554333 799999999999988885
Q ss_pred CCCCCCCCccc
Q 015779 384 KEVMLTSIFPK 394 (400)
Q Consensus 384 ~~~~~~~SF~t 394 (400)
..|+.+..|++
T Consensus 58 ~~gy~g~~~~~ 68 (255)
T COG0024 58 FLGYKGFPFPT 68 (255)
T ss_pred hccCcCCCcce
Confidence 23566655554
No 37
>PRK12897 methionine aminopeptidase; Reviewed
Probab=91.56 E-value=0.065 Score=50.16 Aligned_cols=76 Identities=11% Similarity=0.020 Sum_probs=46.5
Q ss_pred EeecCccccHHHHHHhhcCCcEEE-----eCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhcc
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVR-----DYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKL 292 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~-----~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l 292 (400)
.++.+.++...+...+...|.... .|..+ ++.+.+++ |+.| +.++.|.+|.+ +.+.+|.+-
T Consensus 33 ~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~------i~~g~n~~~~H~~p~~~~l~~Gd~V~iD~g-~~~~GY~sD 105 (248)
T PRK12897 33 PGITTKEINTFVEAYLEKHGATSEQKGYNGYPYA------ICASVNDEMCHAFPADVPLTEGDIVTIDMV-VNLNGGLSD 105 (248)
T ss_pred CCCcHHHHHHHHHHHHHHcCCcccccccCCCCcc------eEeccCCEeecCCCCCcccCCCCEEEEEee-EEECCEEEE
Confidence 577788887777777766666532 23322 34456655 7665 56889999998 677777653
Q ss_pred CCCceeecCChhHHHH
Q 015779 293 NSDKVLLQQSPLALAK 308 (400)
Q Consensus 293 ~~~~~~~~~~~i~~lR 308 (400)
.. +.+..+.|...+|
T Consensus 106 ~t-RT~~vG~~s~~~~ 120 (248)
T PRK12897 106 SA-WTYRVGKVSDEAE 120 (248)
T ss_pred EE-EEEEcCCCCHHHH
Confidence 32 3333344444433
No 38
>PRK12318 methionine aminopeptidase; Provisional
Probab=90.29 E-value=0.11 Score=49.88 Aligned_cols=75 Identities=11% Similarity=0.050 Sum_probs=40.2
Q ss_pred EeecCccccHHHHHHhhcCCcEE-------EeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHh
Q 015779 225 LYVDKRKVSSEVISFLKESGVEV-------RDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYS 290 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~-------~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~ 290 (400)
.++.+.++...+...+...|..- .+|..+ ++.+.+++ |+.| +.++.|.+|.+ +.+.+|.
T Consensus 72 pG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~------v~~g~n~~~~H~~p~~~~l~~GD~V~vD~g-~~~~GY~ 144 (291)
T PRK12318 72 EGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKT------ICTSLNEVICHGIPNDIPLKNGDIMNIDVS-CIVDGYY 144 (291)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcc------eEeeccceeecCCCCCCccCCCCEEEEEEe-EEECcEE
Confidence 46677777654544443334311 123322 34455554 7655 56889999998 6777775
Q ss_pred ccCCCceeecCChhHHH
Q 015779 291 KLNSDKVLLQQSPLALA 307 (400)
Q Consensus 291 ~l~~~~~~~~~~~i~~l 307 (400)
.-.. +.+.++.|-+.+
T Consensus 145 aDit-RT~~vG~~~~~~ 160 (291)
T PRK12318 145 GDCS-RMVMIGEVSEIK 160 (291)
T ss_pred EEEE-EEEECCCCCHHH
Confidence 5322 333344444433
No 39
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=89.55 E-value=11 Score=40.36 Aligned_cols=39 Identities=18% Similarity=0.243 Sum_probs=32.9
Q ss_pred ceeecCChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHH
Q 015779 296 KVLLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYI 334 (400)
Q Consensus 296 ~~~~~~~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l 334 (400)
..++++-.+..+=++||+.||+.||.|+......|..++
T Consensus 123 n~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~ 161 (960)
T KOG1189|consen 123 NKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYL 161 (960)
T ss_pred ceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHH
Confidence 456676678999999999999999999988887887554
No 40
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=88.63 E-value=2.7 Score=35.33 Aligned_cols=87 Identities=22% Similarity=0.239 Sum_probs=48.2
Q ss_pred ccHHHHHHHHHHHHhhcCCcEEEEeCc----------------cccccccCCCCCCCCCCccceeEEEE-EC--CceEEe
Q 015779 166 SSVVEKLKELREKLTNEKARGIIITTL----------------DEVAWLYNIRGTDVPYCPVVHAFAIV-TT--NAAFLY 226 (400)
Q Consensus 166 ~s~~~ki~~lr~~l~~~~~dallit~~----------------~ni~yltg~rG~d~~~~p~~~~~lli-~~--~~~~l~ 226 (400)
+.+.+|+++|.+.|...+ .+++.+- .|..||||+.--+ +++++ .. ++.+||
T Consensus 4 ~~~~~RR~~l~~~l~~~~--~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~--------~~lvl~~~~~~~~~LF 73 (134)
T PF05195_consen 4 EEYAERRKKLAEKLPDNS--IVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPD--------AVLVLKDGESGKSTLF 73 (134)
T ss_dssp HHHHHHHHHHHHHSHSSE--EEEEE----EEEETTEEE-----HHHHHHH---STT---------EEEEEECTTEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCc--EEEEECCCeeeecCCCccccccCCcEEEEeCCCCCC--------EEEEEecCCCCeEEEE
Confidence 467889999999997522 2233221 4788999997544 67778 43 367899
Q ss_pred ecCccccHH--------HHHHhhcCCc-EEEeCccHHHHHHHHHh
Q 015779 227 VDKRKVSSE--------VISFLKESGV-EVRDYDAVSSDVVLLQS 262 (400)
Q Consensus 227 vd~r~~~~~--------~~~~~~~~g~-~~~~~~~i~~~l~~l~~ 262 (400)
++.+....+ .+......|+ ++.+.+.+...|..+..
T Consensus 74 ~~~~d~~~e~W~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~~ 118 (134)
T PF05195_consen 74 VPPKDPDDEIWDGPRPGPEEAKEIYGVDEVYYIDELEEVLSELLK 118 (134)
T ss_dssp E----CCGHHCCSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHHT
T ss_pred eCCCCcCccEECccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHHc
Confidence 987654321 1222222466 56677788888877764
No 41
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=87.62 E-value=1 Score=39.36 Aligned_cols=133 Identities=15% Similarity=0.188 Sum_probs=74.5
Q ss_pred HHHHHHHHHHhhcCC----CCceEEEEcCCC-CCCcccccCccccceecccccccceEEEEeCCceEEEEecc---cHHH
Q 015779 2 AEILAALRSLMSSHD----PPLHALVVPSED-YHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGR---YFLQ 73 (400)
Q Consensus 2 ~~Rl~~lr~~m~~~~----~~lDa~li~~~D-~h~~e~~~~~~~~~~yltGf~gs~g~~li~~~~a~l~vd~R---y~~q 73 (400)
..||++|.+..++.+ .++||++|.... ...+.|.-..- =-.||.||.=.+.++++|+++-++++... +..+
T Consensus 7 ~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~a-Lq~WLlGYEfpdTiiv~tk~~i~~ltS~KKa~~L~~ 85 (163)
T PF14826_consen 7 HKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKSTA-LQTWLLGYEFPDTIIVFTKKKIHFLTSKKKAKFLEP 85 (163)
T ss_dssp HHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHHH-HHHHHHSS--SSEEEEEETTEEEEEEEHHHHHCCCC
T ss_pred HHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHHH-HHHHHhcccHhhhhhhhcCCEEEEEeCHHHHHHHHH
Confidence 479999999998874 258999885552 12222221111 12499999877778888999888888765 3444
Q ss_pred HHhhc--cC--CEEEEEcC-CC-----CCHHHHHhccCC-CCCEEEECCCc-ccHHHHHHHHHHHhhcCCeEEeC
Q 015779 74 ATQEL--TG--EWKLMRML-ED-----PAVDVWMANNLP-NDAAIGVDPWC-VSIDTAQRWERAFAKKQQKLVQT 136 (400)
Q Consensus 74 a~~~~--~~--~~~~~~~~-~~-----~~~~~~l~~~l~-~~~~vg~d~~~-~s~~~~~~l~~~l~~~~~~~~~~ 136 (400)
+++.. .+ .++++.-. .+ ..+ +-+.+.++ .+++||+=..- ..-.+.+.+.+.+...+.+.|++
T Consensus 86 l~~~~~~~~~~~v~ll~R~k~d~~~~~~~f-~kl~~~ik~~g~~vG~~~Kd~~~G~f~~~w~~~l~~~~~~~vDv 159 (163)
T PF14826_consen 86 LKKPAKEGGSIPVELLVRNKKDPEKNKANF-EKLIEAIKKAGKKVGVLAKDKFEGKFVDEWKEALKKSGFEKVDV 159 (163)
T ss_dssp HCCCTTTT-SSEEEEEEE-TT-HHHHHHHH-HHHHHHHHCCTSEEEE-TT----SHHHHHHHHHHCHHCSEEEE-
T ss_pred HhhccccCCCceEEEEEeCCCCccchHHHH-HHHHHHHHhcCCeEeEecCCCCCCchHHHHHHHHhhcCCceeec
Confidence 54321 11 35544222 21 112 22333343 56899986533 44467778888887767888876
No 42
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=84.94 E-value=0.91 Score=38.26 Aligned_cols=64 Identities=16% Similarity=0.299 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhhcCCCCceEEEEcCCCCC-C---cccccCccccceecccccccceEEEE-eC--CceEEEEecc
Q 015779 2 AEILAALRSLMSSHDPPLHALVVPSEDYH-Q---SEYVSARDKRREFVSGFTGSAGLALI-TM--NEALLWTDGR 69 (400)
Q Consensus 2 ~~Rl~~lr~~m~~~~~~lDa~li~~~D~h-~---~e~~~~~~~~~~yltGf~gs~g~~li-~~--~~a~l~vd~R 69 (400)
.+|.++|-+.|.+. .++||++.++. . .+|+=-.+.+.+||||+.--.+++++ .. ++.+||++.+
T Consensus 7 ~~RR~~l~~~l~~~----~~vil~~~~~~~~~~D~~y~FrQ~s~F~YLTG~~ep~~~lvl~~~~~~~~~LF~~~~ 77 (134)
T PF05195_consen 7 AERRKKLAEKLPDN----SIVILPGGPEKYRSNDIEYPFRQDSNFYYLTGFNEPDAVLVLKDGESGKSTLFVPPK 77 (134)
T ss_dssp HHHHHHHHHHSHSS----EEEEEE----EEEETTEEE-----HHHHHHH---STT-EEEEEECTTEEEEEEE---
T ss_pred HHHHHHHHHhcCCC----cEEEEECCCeeeecCCCccccccCCcEEEEeCCCCCCEEEEEecCCCCeEEEEeCCC
Confidence 46888888888763 45566555433 2 25555567789999999977777777 33 3788999654
No 43
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=81.78 E-value=0.82 Score=42.09 Aligned_cols=23 Identities=17% Similarity=0.007 Sum_probs=19.0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Q 015779 316 LDGLKKAHIRDGAAIVQYIIWLD 338 (400)
Q Consensus 316 I~~mr~A~~~d~~a~~~~l~~l~ 338 (400)
++.||+|+.+.+.++...+.+++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~ 23 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCV 23 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcc
Confidence 36899999999999988877766
No 44
>PRK12896 methionine aminopeptidase; Reviewed
Probab=81.68 E-value=0.21 Score=46.71 Aligned_cols=61 Identities=11% Similarity=0.015 Sum_probs=35.7
Q ss_pred EeecCccccHHHHHHhhcCCcEEE-----eCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhcc
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVR-----DYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKL 292 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~-----~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l 292 (400)
.++++.++...+...+...|.... .|... ...+.+.. |+.| +.++.|.+|.+ +.+.+|..-
T Consensus 39 pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~------~~~~~n~~~~h~~p~~~~l~~Gd~v~iD~g-~~~~gY~aD 111 (255)
T PRK12896 39 PGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGS------TCISVNEEVAHGIPGPRVIKDGDLVNIDVS-AYLDGYHGD 111 (255)
T ss_pred CCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcc------eEecCCCeeEecCCCCccCCCCCEEEEEEe-EEECcEEEe
Confidence 466777777666666655665521 12221 12233332 6544 45789999998 677887653
No 45
>PRK07281 methionine aminopeptidase; Reviewed
Probab=80.69 E-value=0.29 Score=46.92 Aligned_cols=52 Identities=25% Similarity=0.086 Sum_probs=34.4
Q ss_pred EeecCccccHHHHHHhhcCCcE---------EEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCC
Q 015779 225 LYVDKRKVSSEVISFLKESGVE---------VRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPN 282 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~---------~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~ 282 (400)
.++++.++...+...+...|+. ...|..+ ++.+.|++ |+.| +.++.|.+|.+
T Consensus 33 pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~------v~~G~n~~~~H~~p~~~~l~~Gd~v~iD~g 100 (286)
T PRK07281 33 PGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYA------TCCGLNDEVAHAFPRHYILKEGDLLKVDMV 100 (286)
T ss_pred CCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcc------eEEeccccccCCCCCCcCcCCCCEEEEEec
Confidence 5677888877777666554432 1234443 56667766 7766 57899999987
No 46
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=79.37 E-value=1.3 Score=39.82 Aligned_cols=120 Identities=17% Similarity=0.210 Sum_probs=63.7
Q ss_pred EeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhccCCCce
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSDKV 297 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l~~~~~ 297 (400)
.++++.++...+...+...|.+...|..+ +.++.++. |..| +.++.|.+|.+ ..+.+|..-.. +.
T Consensus 24 ~G~te~ei~~~~~~~~~~~g~~~~~~~~~------v~~g~~~~~~h~~~~~~~l~~gd~v~id~g-~~~~gy~~d~~-RT 95 (208)
T cd01092 24 PGMTEREVAAELEYFMRKLGAEGPSFDTI------VASGPNSALPHGVPSDRKIEEGDLVLIDFG-AIYDGYCSDIT-RT 95 (208)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCCCcE------EEECccccccCCCCCCcCcCCCCEEEEEee-eeECCEeccce-eE
Confidence 46777777777776666666654455554 45555543 5444 56789999987 56677754322 33
Q ss_pred eecCChhHHHHh-cCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccc
Q 015779 298 LLQQSPLALAKA-IKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLE 353 (400)
Q Consensus 298 ~~~~~~i~~lRa-iK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~ 353 (400)
+..++|...+|. ..-..+....--+..++|..+.++...+...+. .+|...+|.|
T Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~-~~g~~~~~~~ 151 (208)
T cd01092 96 VAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIE-EAGYGEYFIH 151 (208)
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH-HcCccccCCC
Confidence 334444444432 222222222222345566666666555544332 3444444433
No 47
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=78.02 E-value=0.61 Score=43.04 Aligned_cols=127 Identities=13% Similarity=-0.034 Sum_probs=70.8
Q ss_pred EeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhccCCCce
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSDKV 297 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l~~~~~ 297 (400)
.++.+.++...+...+...|....++........-+.++.+++ |+.+ +.++.|.+|.+ ..+.+|..-.. +.
T Consensus 24 pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~GD~v~~d~g-~~~~GY~ad~~-RT 101 (228)
T cd01090 24 EGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRGDILSLNCF-PMIAGYYTALE-RT 101 (228)
T ss_pred CCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCCCEEEEEEe-EEECCEeeeeE-EE
Confidence 4667777776666666555543323321100000034556655 7554 67899999987 67788865432 33
Q ss_pred eecCChhHHHH-hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCcccccc
Q 015779 298 LLQQSPLALAK-AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEG 354 (400)
Q Consensus 298 ~~~~~~i~~lR-aiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~ 354 (400)
+..+.|-..+| ..+-..|....-.+.+++|+.+.++-......+ +.+|+..++.|+
T Consensus 102 ~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~-~~~G~~~~~~~~ 158 (228)
T cd01090 102 LFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMY-REHDLLRYRTFG 158 (228)
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHH-HHcCCCcccccc
Confidence 33445555554 444444444444466788887777766555433 346666666553
No 48
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=77.66 E-value=1.1 Score=41.70 Aligned_cols=76 Identities=13% Similarity=0.125 Sum_probs=41.5
Q ss_pred EeecCccccHHHHHHhhcCCcEEE-----eCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhcc
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVR-----DYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKL 292 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~-----~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l 292 (400)
.++++.++...+...+...|.... .|..+ +..+.+++ |+.| +.++.|.+|.+ +.+.+|.+-
T Consensus 32 ~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~------~~~~~n~~~~H~~~~~~~l~~Gd~v~iD~g-~~~~gY~aD 104 (247)
T TIGR00500 32 PGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGS------VCISVNEVVIHGIPDKKVLKDGDIVNIDVG-VIYDGYHGD 104 (247)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCccccCCCCCCce------eEeccccEEEecCCCCcccCCCCEEEEEEE-EEECCEEEE
Confidence 466777776666666655554321 12211 22333433 6544 56789999998 778888653
Q ss_pred CCCceeecCChhHHHH
Q 015779 293 NSDKVLLQQSPLALAK 308 (400)
Q Consensus 293 ~~~~~~~~~~~i~~lR 308 (400)
-. +.+..+.|-..+|
T Consensus 105 ~~-RT~~vG~~~~~~~ 119 (247)
T TIGR00500 105 TA-KTFLVGKISPEAE 119 (247)
T ss_pred EE-EEEEcCCCCHHHH
Confidence 32 3333334444443
No 49
>PLN03158 methionine aminopeptidase; Provisional
Probab=77.47 E-value=0.39 Score=48.14 Aligned_cols=75 Identities=8% Similarity=-0.068 Sum_probs=42.1
Q ss_pred EeecCccccHHHHHHhhcCCcEEE-----eCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhcc
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVR-----DYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKL 292 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~-----~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l 292 (400)
.++.+.++...+...+...|..-. .|... +..+.|.. |+.| +.++.|.+|.+ +.+.+|...
T Consensus 166 pGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~s------vcts~N~~i~Hgip~~r~L~~GDiV~iDvg-~~~~GY~aD 238 (396)
T PLN03158 166 PGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKS------CCTSVNEVICHGIPDARKLEDGDIVNVDVT-VYYKGCHGD 238 (396)
T ss_pred CCCCHHHHHHHHHHHHHHcCCccccccccCCCce------eeecccccccCCCCCCccCCCCCEEEEEEe-EEECCEEEe
Confidence 467777777777666554554321 12211 23344443 7655 56899999987 677777653
Q ss_pred CCCceeecCChhHHH
Q 015779 293 NSDKVLLQQSPLALA 307 (400)
Q Consensus 293 ~~~~~~~~~~~i~~l 307 (400)
.. +.+.++.+-+.+
T Consensus 239 ~t-RT~~VG~~~~e~ 252 (396)
T PLN03158 239 LN-ETFFVGNVDEAS 252 (396)
T ss_pred EE-eEEEcCCCCHHH
Confidence 22 333344444433
No 50
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=72.58 E-value=12 Score=40.14 Aligned_cols=112 Identities=10% Similarity=0.110 Sum_probs=69.3
Q ss_pred eecccccccceEEEEeCCceEEEEecccHH---HHHhhc--cC---CEEEE-Ec-CC-CCCHHHHHhccCC-CCCEEEEC
Q 015779 43 EFVSGFTGSAGLALITMNEALLWTDGRYFL---QATQEL--TG---EWKLM-RM-LE-DPAVDVWMANNLP-NDAAIGVD 110 (400)
Q Consensus 43 ~yltGf~gs~g~~li~~~~a~l~vd~Ry~~---qa~~~~--~~---~~~~~-~~-~~-~~~~~~~l~~~l~-~~~~vg~d 110 (400)
-||.|+.-.+.++|+++++.++.+-.+-.+ ++.+-. ++ .+.+. +. .+ +....+-|.+.++ .+++||+=
T Consensus 21 ~WLlGYEfpdTilv~~~~~i~iltSkkKa~~l~~~~~~~~~~~~~~~v~llvR~k~d~n~~~fdkii~~ik~~gk~vGvf 100 (960)
T KOG1189|consen 21 TWLLGYEFPDTILVLCKDKIYILTSKKKAEFLQKVTNLAQSSEGKPTVNLLVRDKNDDNKGLFDKIIKAIKSAGKKVGVF 100 (960)
T ss_pred HHHhccccCceEEEEecCcEEEEecchhHHHHHhhcccccCcccCcceEEEecccCccccccHHHHHHHHHhcCCeeeee
Confidence 489998866666667777777777555332 221111 11 23333 21 11 2222233444444 46788865
Q ss_pred C-CcccHHHHHHHHHHHhhcCCeEEeCCcChhhhhhhcCCCCCCCC
Q 015779 111 P-WCVSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKNRPPVETYP 155 (400)
Q Consensus 111 ~-~~~s~~~~~~l~~~l~~~~~~~~~~~~~lid~ir~~K~~~e~~~ 155 (400)
+ +.++-.+...|...|.+.+.+.+++ +--+..+|.+|++.|.+.
T Consensus 101 ~ke~~~G~F~~~W~~~l~~~~fn~vDi-s~~ls~l~avKDd~Ei~~ 145 (960)
T KOG1189|consen 101 AKEKFQGEFMESWNKRLEAGGFNKVDI-SLGLSKLFAVKDDEEIAN 145 (960)
T ss_pred cccccchhHHHHHHHHhhhcCCceeeh-hhhhhhheeeccHHHHHH
Confidence 4 5577778888888888777788887 566899999999998443
No 51
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=67.50 E-value=17 Score=34.65 Aligned_cols=54 Identities=11% Similarity=0.174 Sum_probs=36.0
Q ss_pred hcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCC
Q 015779 309 AIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFRASKEVML 388 (400)
Q Consensus 309 aiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~~~~~~~~ 388 (400)
.|.++++|++||+|+++...++ ..-...+. +|+|=-|+...+...--+.+.|-
T Consensus 115 ~i~~~e~ie~mR~ac~LarevL----d~Aa~~v~-----------------------PgvTTdEiD~~VH~a~Ierg~YP 167 (369)
T KOG2738|consen 115 KILDPEGIEGMRKACRLAREVL----DYAATLVR-----------------------PGVTTDEIDRAVHNAIIERGAYP 167 (369)
T ss_pred eccCHHHHHHHHHHHHHHHHHH----HHHhhhcC-----------------------CCccHHHHHHHHHHHHHhcCCcC
Confidence 4678999999999999986444 32222121 78987788777776555554443
Q ss_pred C
Q 015779 389 T 389 (400)
Q Consensus 389 ~ 389 (400)
+
T Consensus 168 S 168 (369)
T KOG2738|consen 168 S 168 (369)
T ss_pred C
Confidence 3
No 52
>PRK05716 methionine aminopeptidase; Validated
Probab=66.60 E-value=0.68 Score=43.18 Aligned_cols=77 Identities=9% Similarity=0.037 Sum_probs=40.9
Q ss_pred EeecCccccHHHHHHhhcCCcEEE-----eCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhcc
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVR-----DYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKL 292 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~-----~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l 292 (400)
.++++.++...+...+...|.... .|..+ +..+.++. |+.+ +.++.|.+|.+ +.+.+|..-
T Consensus 34 pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~------~~~g~~~~~~h~~~~~~~l~~Gd~v~id~g-~~~~gY~~d 106 (252)
T PRK05716 34 PGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKS------ICTSVNEVVCHGIPSDKVLKEGDIVNIDVT-VIKDGYHGD 106 (252)
T ss_pred CCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcC------eEecccceeecCCCCCcccCCCCEEEEEEE-EEECCEEEE
Confidence 466777776666666655555321 12211 12233322 5543 56789999998 677777653
Q ss_pred CCCceeecCChhHHHHh
Q 015779 293 NSDKVLLQQSPLALAKA 309 (400)
Q Consensus 293 ~~~~~~~~~~~i~~lRa 309 (400)
.. +....+.|-..+|.
T Consensus 107 ~~-RT~~vG~~~~~~~~ 122 (252)
T PRK05716 107 TS-RTFGVGEISPEDKR 122 (252)
T ss_pred eE-EEEECCCCCHHHHH
Confidence 32 33333444444443
No 53
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=63.49 E-value=2.7 Score=41.17 Aligned_cols=67 Identities=21% Similarity=0.154 Sum_probs=42.2
Q ss_pred CcEEEeCccHHHHHHHHHhcCCCC--C---C-CC-----CCCcEEEECCCcccHHHHhccCCCceeecCChhHHHHhcCC
Q 015779 244 GVEVRDYDAVSSDVVLLQSNQLNP--P---A-DV-----QGSDLIWADPNSCSYALYSKLNSDKVLLQQSPLALAKAIKN 312 (400)
Q Consensus 244 g~~~~~~~~i~~~l~~l~~~~~~~--h---~-~~-----~~~~~v~id~~~~~~~~y~~l~~~~~~~~~~~i~~lRaiK~ 312 (400)
|..-.+|.-| .++|.|++ | + .| ++++..+||.+ ..|..|.+.-...+-.-+...+.+|.|.|
T Consensus 234 GcRh~sYtcI------c~sG~ns~vLHYgha~apNd~~iqdgd~cLfDmG-aey~~yaSDITcsFP~nGKFTadqk~VYn 306 (492)
T KOG2737|consen 234 GCRHLSYTCI------CASGDNSAVLHYGHAGAPNDRTIQDGDLCLFDMG-AEYHFYASDITCSFPVNGKFTADQKLVYN 306 (492)
T ss_pred Ccccccccee------eecCCCcceeeccccCCCCCcccCCCCEEEEecC-cceeeeecccceeccCCCccchhHHHHHH
Confidence 4566678777 68888888 4 2 33 67889999998 67777754221122222345577777777
Q ss_pred HHHHh
Q 015779 313 PVELD 317 (400)
Q Consensus 313 ~~EI~ 317 (400)
.+-.+
T Consensus 307 aVLda 311 (492)
T KOG2737|consen 307 AVLDA 311 (492)
T ss_pred HHHHH
Confidence 65433
No 54
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=60.96 E-value=5.9 Score=36.64 Aligned_cols=106 Identities=9% Similarity=0.078 Sum_probs=60.2
Q ss_pred EeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhccCCCce
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSDKV 297 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l~~~~~ 297 (400)
.++++.++...+...+...|.+ ..|..+ ++.+.+++ |..| +.++.|.+|.+ +.+.+|..-..-++
T Consensus 24 pG~tE~ei~~~~~~~~~~~G~~-~~~~~~------v~~g~~~~~~H~~~~~~~l~~Gd~v~vD~g-~~~~GY~ad~~Rt~ 95 (243)
T cd01087 24 PGMSEYELEAEFEYEFRSRGAR-LAYSYI------VAAGSNAAILHYVHNDQPLKDGDLVLIDAG-AEYGGYASDITRTF 95 (243)
T ss_pred CCCcHHHHHHHHHHHHHHcCCC-cCCCCe------EEECCCccccCCCcCCCcCCCCCEEEEEeC-ceECCEeeeeeEEE
Confidence 4667778877777776666766 445443 45566655 7554 56899999998 67777765332233
Q ss_pred eecCChhHHH-HhcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 015779 298 LLQQSPLALA-KAIKNPVELDGLKKAHIRDGAAIVQYIIWLD 338 (400)
Q Consensus 298 ~~~~~~i~~l-RaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~ 338 (400)
...+.|-..+ |..+-..|....--+.+++|+.+.++.....
T Consensus 96 ~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~ 137 (243)
T cd01087 96 PVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAH 137 (243)
T ss_pred EeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 3223443434 3443333333333345566665555544333
No 55
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=56.07 E-value=30 Score=30.25 Aligned_cols=112 Identities=15% Similarity=0.089 Sum_probs=60.8
Q ss_pred EeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhccCCCce
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSDKV 297 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l~~~~~ 297 (400)
.++.+.++...+...+...|. ..++..+ ++.+.++. |..+ +.++.|.+|.+ ..+.+|..-.. +.
T Consensus 24 ~G~te~ei~~~~~~~~~~~g~-~~~~~~~------v~~g~~~~~~h~~~~~~~i~~gd~v~~d~g-~~~~gy~~d~~-rt 94 (207)
T cd01066 24 PGVTEAEVAAAIEQALRAAGG-YPAGPTI------VGSGARTALPHYRPDDRRLQEGDLVLVDLG-GVYDGYHADLT-RT 94 (207)
T ss_pred CCCCHHHHHHHHHHHHHHcCC-CCCCCcE------EEECccccCcCCCCCCCCcCCCCEEEEEec-eeECCCcccee-ce
Confidence 356677776666666655555 1122222 23333222 5443 56789999998 67767755332 33
Q ss_pred eecCChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHH
Q 015779 298 LLQQSPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKL 377 (400)
Q Consensus 298 ~~~~~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l 377 (400)
+..+.+- +.+++++.....++...+..++ +|+|=.++....
T Consensus 95 ~~~g~~~------------~~~~~~~~~~~~~~~~~~~~i~---------------------------pG~~~~ei~~~~ 135 (207)
T cd01066 95 FVIGEPS------------DEQRELYEAVREAQEAALAALR---------------------------PGVTAEEVDAAA 135 (207)
T ss_pred eEcCCCC------------HHHHHHHHHHHHHHHHHHHHhc---------------------------CCCcHHHHHHHH
Confidence 3333331 2333444333333334444333 588888888888
Q ss_pred HHHHhhC
Q 015779 378 ESFRASK 384 (400)
Q Consensus 378 ~~~~~~~ 384 (400)
..+.+++
T Consensus 136 ~~~~~~~ 142 (207)
T cd01066 136 REVLEEH 142 (207)
T ss_pred HHHHHHc
Confidence 8777765
No 56
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=46.50 E-value=18 Score=33.69 Aligned_cols=101 Identities=15% Similarity=0.120 Sum_probs=52.6
Q ss_pred cCccccHHHHHHhhcCCcE---------EEeCccHHHHHHHHHhcCCC-C--CCCC-----CCCcEEEECCCcccHHHHh
Q 015779 228 DKRKVSSEVISFLKESGVE---------VRDYDAVSSDVVLLQSNQLN-P--PADV-----QGSDLIWADPNSCSYALYS 290 (400)
Q Consensus 228 d~r~~~~~~~~~~~~~g~~---------~~~~~~i~~~l~~l~~~~~~-~--h~~~-----~~~~~v~id~~~~~~~~y~ 290 (400)
.+..+..+++..+...+.. -..|.++ +++|.++ . |+.+ ..++.|.+|.+ +.|.+|+
T Consensus 34 t~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~y~~i------v~sG~~~~~l~h~~~s~~~~~~~~~vl~d~G-~~y~gY~ 106 (243)
T cd01091 34 THSKLSDKVEKAIEDKKKYKAKLDPEQLDWCYPPI------IQSGGNYDLLKSSSSSDKLLYHFGVIICSLG-ARYKSYC 106 (243)
T ss_pred cHHHHHHHHHHHHhCchhhhcCCCHHHcCcccCCe------EeECcCcccCCCCCCCccccCCCCEEEEEeC-cccCCEe
Confidence 3445555666666544432 1245454 5667766 4 5443 45577889987 7888887
Q ss_pred ccCCCceeecCChhHHHHhcCC-HHHHhhHHHHHHHHHHHHHHHHHHH
Q 015779 291 KLNSDKVLLQQSPLALAKAIKN-PVELDGLKKAHIRDGAAIVQYIIWL 337 (400)
Q Consensus 291 ~l~~~~~~~~~~~i~~lRaiK~-~~EI~~mr~A~~~d~~a~~~~l~~l 337 (400)
+--. +.+.+. |-..+|.+.+ ..|+..---++.++|+.+.++....
T Consensus 107 sdit-RT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a 152 (243)
T cd01091 107 SNIA-RTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKT 152 (243)
T ss_pred ecce-EEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 6432 333333 4444443333 2333322224456666555554433
No 57
>PF14826 FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain; PDB: 3BIQ_A 3BIT_A 3BIP_A 3CB6_A 3CB5_A.
Probab=42.81 E-value=51 Score=28.68 Aligned_cols=58 Identities=21% Similarity=0.369 Sum_probs=39.9
Q ss_pred ccHHHHHHHHHHHHhhcC------CcEEEEeCcc---c-c--------ccccCCCCCCCCCCccceeEEEEECCceEEee
Q 015779 166 SSVVEKLKELREKLTNEK------ARGIIITTLD---E-V--------AWLYNIRGTDVPYCPVVHAFAIVTTNAAFLYV 227 (400)
Q Consensus 166 ~s~~~ki~~lr~~l~~~~------~dallit~~~---n-i--------~yltg~rG~d~~~~p~~~~~lli~~~~~~l~v 227 (400)
....+|+++|.+..++.. +|++++.... + . .||+|+.=.| ..++++++..++++
T Consensus 4 ~~F~~RL~~L~~~W~~~~~~~~~~~dal~i~~G~~~e~~~Y~Ks~aLq~WLlGYEfpd--------Tiiv~tk~~i~~lt 75 (163)
T PF14826_consen 4 ETFHKRLKRLYSSWKEHKDDLWGGADALVIAVGKADEDNPYSKSTALQTWLLGYEFPD--------TIIVFTKKKIHFLT 75 (163)
T ss_dssp HHHHHHHHHHHHHHHCCCHHTSTT-SEEEEEE-S--TTSTT-HHHHHHHHHHSS--SS--------EEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHhccCccccCCCCEEEEEeCCcccCccchhHHHHHHHHhcccHhh--------hhhhhcCCEEEEEe
Confidence 356789999999988765 8888886552 2 2 4899986433 55678888888888
Q ss_pred cCcc
Q 015779 228 DKRK 231 (400)
Q Consensus 228 d~r~ 231 (400)
+..+
T Consensus 76 S~KK 79 (163)
T PF14826_consen 76 SKKK 79 (163)
T ss_dssp EHHH
T ss_pred CHHH
Confidence 7654
No 58
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=38.84 E-value=1e+02 Score=29.66 Aligned_cols=30 Identities=13% Similarity=0.169 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHHHHH----hhCCCCCCCCcccc
Q 015779 366 VKLTEVTVSDKLESFR----ASKEVMLTSIFPKY 395 (400)
Q Consensus 366 ~g~tE~~~a~~l~~~~----~~~~~~~~~SF~tI 395 (400)
||||=.++.+.||..- .+.+-..|+.|||=
T Consensus 108 PGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG 141 (397)
T KOG2775|consen 108 PGMTMIEICETIENTTRKLILENGLNAGIGFPTG 141 (397)
T ss_pred CcccHHHHHHHHHHHHHHHHHhccccccccCCCc
Confidence 7999999999998433 45566778999983
No 59
>PRK08671 methionine aminopeptidase; Provisional
Probab=37.55 E-value=66 Score=30.72 Aligned_cols=61 Identities=13% Similarity=0.074 Sum_probs=36.5
Q ss_pred EeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCCCCCC--------CCCcEEEECCCcccHHHHhccC
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADV--------QGSDLIWADPNSCSYALYSKLN 293 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~h~~~--------~~~~~v~id~~~~~~~~y~~l~ 293 (400)
.++++.++...++..+...|.. ..|... +..+...+|..| +.++.|.+|.+ +.+.+|....
T Consensus 25 pG~se~ei~~~~~~~i~~~g~~-~afp~~------vs~n~~~~H~~p~~~d~~~l~~GDvV~iD~G-~~~dGY~aD~ 93 (291)
T PRK08671 25 PGAKLLDVAEFVENRIRELGAK-PAFPCN------ISINEVAAHYTPSPGDERVFPEGDVVKLDLG-AHVDGYIADT 93 (291)
T ss_pred CCCcHHHHHHHHHHHHHHcCCc-cCCCCE------EeeCCCccCCCCCCCCCcccCCCCEEEEEEe-EEECCEEEEE
Confidence 4566677777677776555543 233332 222333346544 46789999998 7888886543
No 60
>COG1084 Predicted GTPase [General function prediction only]
Probab=33.68 E-value=1.5e+02 Score=29.04 Aligned_cols=64 Identities=17% Similarity=0.258 Sum_probs=46.2
Q ss_pred ChhHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccccccccccccCCCCCCCHHHHHHHHHHHH
Q 015779 302 SPLALAKAIKNPVELDGLKKAHIRDGAAIVQYIIWLDKQMQEIYGASGYFLEGEATKEKKHSGTVKLTEVTVSDKLESFR 381 (400)
Q Consensus 302 ~~i~~lRaiK~~~EI~~mr~A~~~d~~a~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~tE~~~a~~l~~~~ 381 (400)
.-+..+|.-|++.+...+|++ |+.++...++. +. .+++.-.+...++
T Consensus 112 eYi~~lk~a~~~~~~~~lrR~------a~GR~aSiik~-i~--------------------------~~L~fL~~~r~~l 158 (346)
T COG1084 112 EYIRLLKAAKDPKEANQLRRQ------AFGRVASIIKK-ID--------------------------DDLEFLRKARDHL 158 (346)
T ss_pred HHHHHHhcCCChhHHHHHHHH------HHHHHHHHHHH-hh--------------------------HHHHHHHHHHHHH
Confidence 457888888899999888886 33344444442 21 3667777777788
Q ss_pred hhCCCCCCCCcccccccc
Q 015779 382 ASKEVMLTSIFPKYIICC 399 (400)
Q Consensus 382 ~~~~~~~~~SF~tIva~~ 399 (400)
+..| ...+.-+|||.+|
T Consensus 159 ~~LP-~Idp~~pTivVaG 175 (346)
T COG1084 159 KKLP-AIDPDLPTIVVAG 175 (346)
T ss_pred hcCC-CCCCCCCeEEEec
Confidence 8776 8888899999988
No 61
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=32.25 E-value=75 Score=30.45 Aligned_cols=61 Identities=16% Similarity=0.105 Sum_probs=37.6
Q ss_pred EeecCccccHHHHHHhhcCCcEEEeCccHHHHHHHHHhcCCCCCCCC--------CCCcEEEECCCcccHHHHhccC
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVRDYDAVSSDVVLLQSNQLNPPADV--------QGSDLIWADPNSCSYALYSKLN 293 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~~~~~i~~~l~~l~~~~~~~h~~~--------~~~~~v~id~~~~~~~~y~~l~ 293 (400)
.++++.++...++..+.+.|.+ ..|+.. +..+...+|.+| +.++.|.+|.+ +.+.+|....
T Consensus 28 ~G~se~el~~~~e~~~~~~g~~-~aFp~~------vs~n~~~~H~~p~~~d~~~l~~GDvV~iD~G-~~~dGY~aD~ 96 (295)
T TIGR00501 28 PGVKLLEVAEFVENRIRELGAE-PAFPCN------ISINECAAHFTPKAGDKTVFKDGDVVKLDLG-AHVDGYIADT 96 (295)
T ss_pred CCCCHHHHHHHHHHHHHHcCCC-CCCCcc------eecCCEeeCCCCCCCcCccCCCCCEEEEEEe-EEECCEEEEE
Confidence 4667777777777777666654 344442 222222236544 46789999998 7888886543
No 62
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=30.90 E-value=23 Score=32.48 Aligned_cols=109 Identities=12% Similarity=0.057 Sum_probs=55.9
Q ss_pred EeecCccccHHHHHHhhcCCcEEEe--CccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhccCCC
Q 015779 225 LYVDKRKVSSEVISFLKESGVEVRD--YDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKLNSD 295 (400)
Q Consensus 225 l~vd~r~~~~~~~~~~~~~g~~~~~--~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l~~~ 295 (400)
.++++.++...+...+...|.+... +..+.. .+..+.+++ |+.| +.++.|.+|.+ +.+.+|..-- .
T Consensus 24 pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~---~~~~~~~~~~~h~~~~~~~l~~Gd~v~id~g-~~~~GY~ad~-~ 98 (238)
T cd01086 24 PGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPK---SICTSVNEVVCHGIPDDRVLKDGDIVNIDVG-VELDGYHGDS-A 98 (238)
T ss_pred CCCCHHHHHHHHHHHHHHcCCCcccccCCCCCc---ceecCCCCceeCCCCCCcccCCCCEEEEEEE-EEECCEEEEE-E
Confidence 5677887777777776656654221 111100 012233333 6543 56889999997 7778886522 2
Q ss_pred ceeecCChhHHHH-hcCCHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 015779 296 KVLLQQSPLALAK-AIKNPVELDGLKKAHIRDGAAIVQYIIWLD 338 (400)
Q Consensus 296 ~~~~~~~~i~~lR-aiK~~~EI~~mr~A~~~d~~a~~~~l~~l~ 338 (400)
+.+..+.|-..+| ......+....--+.+++|+.+.++..-+.
T Consensus 99 RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~ 142 (238)
T cd01086 99 RTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIE 142 (238)
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 3333444444444 333333333333344555555555544444
No 63
>PF08799 PRP4: pre-mRNA processing factor 4 (PRP4) like; InterPro: IPR014906 This small protein is found on PRP4 ribonuleoproteins. PRP4 is a U4/U6 small nuclear ribonucleoprotein that is involved in pre-mRNA processing. ; PDB: 1MZW_B 2DK4_A.
Probab=28.26 E-value=64 Score=19.68 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=14.6
Q ss_pred ccccccCccHHHHHHHHHHHH
Q 015779 159 QQIEFAGSSVVEKLKELREKL 179 (400)
Q Consensus 159 ~~~~~~G~s~~~ki~~lr~~l 179 (400)
.|+.+-|++..+|.+++++.+
T Consensus 10 ePi~lFGE~~~~R~~RLr~l~ 30 (30)
T PF08799_consen 10 EPITLFGETDADRRERLRRLL 30 (30)
T ss_dssp --SCETT--HHHHHHHHHHHH
T ss_pred CChhhhCCChHHHHHHHHHhC
Confidence 477889999999999998753
No 64
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=27.23 E-value=47 Score=30.43 Aligned_cols=80 Identities=10% Similarity=0.012 Sum_probs=47.9
Q ss_pred Ee--ecCccccHHHHHHhhcCC-cEEEeCccHHHHHHHHHhcCCCC--CCCC--------CCCcEEEECCCcccHHHHhc
Q 015779 225 LY--VDKRKVSSEVISFLKESG-VEVRDYDAVSSDVVLLQSNQLNP--PADV--------QGSDLIWADPNSCSYALYSK 291 (400)
Q Consensus 225 l~--vd~r~~~~~~~~~~~~~g-~~~~~~~~i~~~l~~l~~~~~~~--h~~~--------~~~~~v~id~~~~~~~~y~~ 291 (400)
.+ +++.++...++..+...+ .....|..+ ++++.+++ |+.| +.++.|.+|.+ +.+.+|..
T Consensus 26 ~G~~~tE~eiaa~~~~~~~~~g~~~~~~f~~~------v~~g~n~~~~H~~p~~~~~r~l~~GD~V~iD~g-~~~~gY~a 98 (224)
T cd01085 26 KGETITELSAADKLEEFRRQQKGYVGLSFDTI------SGFGPNGAIVHYSPTEESNRKISPDGLYLIDSG-GQYLDGTT 98 (224)
T ss_pred cCCCEeHHHHHHHHHHHHHHcCCCcCCCcceE------EEecCccCcCCCCcCcccCcccCCCCEEEEEeC-ccCCCccc
Confidence 56 777888777766554322 222244444 56677766 7654 36789999998 78888865
Q ss_pred cCCCceeecCChhHHHHhcCC
Q 015779 292 LNSDKVLLQQSPLALAKAIKN 312 (400)
Q Consensus 292 l~~~~~~~~~~~i~~lRaiK~ 312 (400)
-.. +.+..+.+-+.+|.+-+
T Consensus 99 D~~-RT~~vG~~~~~~~~~~~ 118 (224)
T cd01085 99 DIT-RTVHLGEPTAEQKRDYT 118 (224)
T ss_pred ccE-EeecCCCCCHHHHHHHH
Confidence 432 33334445555655433
No 65
>PF14503 YhfZ_C: YhfZ C-terminal domain; PDB: 2OZZ_B.
Probab=25.80 E-value=2.3e+02 Score=26.23 Aligned_cols=34 Identities=26% Similarity=0.441 Sum_probs=15.8
Q ss_pred CCCCCEEEECCCcccHHHHHHHHHHHhhcCCeEEeC
Q 015779 101 LPNDAAIGVDPWCVSIDTAQRWERAFAKKQQKLVQT 136 (400)
Q Consensus 101 l~~~~~vg~d~~~~s~~~~~~l~~~l~~~~~~~~~~ 136 (400)
+..+.|||+|++. ..+..--+..++++++++|.+
T Consensus 111 i~dGmRVGiD~~S--~Dq~~LT~~~~~gk~Ve~Vei 144 (232)
T PF14503_consen 111 IEDGMRVGIDPSS--IDQKILTEAEFEGKNVEFVEI 144 (232)
T ss_dssp -----EEEE-TT---HHHHHHHHHHHTTS--EEEE-
T ss_pred eeeeeEeecCCCC--ccHHHHHHHHhCCCceEEEEe
Confidence 3446799999864 444333344566777888876
No 66
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain II found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 2F7L_A 3PDK_B 1KFQ_B 1KFI_A 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B ....
Probab=25.42 E-value=3.2e+02 Score=21.14 Aligned_cols=71 Identities=20% Similarity=0.070 Sum_probs=41.9
Q ss_pred CCEEEECCCc-ccHHHHHHHHHHHhhcCCeEEeCCcChhhhhhhc-CCCCCCCCcccccccccCccHHHHHHHHHHHHhh
Q 015779 104 DAAIGVDPWC-VSIDTAQRWERAFAKKQQKLVQTSTNLVDKVWKN-RPPVETYPVTVQQIEFAGSSVVEKLKELREKLTN 181 (400)
Q Consensus 104 ~~~vg~d~~~-~s~~~~~~l~~~l~~~~~~~~~~~~~lid~ir~~-K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~ 181 (400)
+-+|.+|+.. .+...+..+-+. .|++.+.+ ....+..+.. +.+.+.. +-++.+.+.+++
T Consensus 21 ~~kivvD~~~G~~~~~~~~ll~~---lg~~~~~~-n~~~d~~f~~~~~p~p~~---------------~~l~~~~~~v~~ 81 (104)
T PF02879_consen 21 GLKIVVDCMNGAGSDILPRLLER---LGCDVIEL-NCDPDPDFPNQHAPNPEE---------------ESLQRLIKIVRE 81 (104)
T ss_dssp TCEEEEE-TTSTTHHHHHHHHHH---TTCEEEEE-SSS-STTGTTTSTSSTST---------------TTTHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHH---cCCcEEEE-eccccccccccccccccc---------------chhHHHHHHhhc
Confidence 3489999855 444555554443 45666655 4556666644 3222210 117888888888
Q ss_pred cCCcEEEEeCcc
Q 015779 182 EKARGIIITTLD 193 (400)
Q Consensus 182 ~~~dallit~~~ 193 (400)
.++|..+..+++
T Consensus 82 ~~ad~g~~~DgD 93 (104)
T PF02879_consen 82 SGADLGIAFDGD 93 (104)
T ss_dssp STTSEEEEE-TT
T ss_pred cCceEEEEECCc
Confidence 999998888775
No 67
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=25.11 E-value=3.4e+02 Score=24.81 Aligned_cols=59 Identities=24% Similarity=0.173 Sum_probs=38.4
Q ss_pred CeEEeCCcChhhhhhhcCCCCCCCCcccccccccCccHHHHHHHHHHHHhhcCCcEEEEeCccc
Q 015779 131 QKLVQTSTNLVDKVWKNRPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNEKARGIIITTLDE 194 (400)
Q Consensus 131 ~~~~~~~~~lid~ir~~K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~~~dallit~~~n 194 (400)
+++++. ++++..++..+|. .+.+---.-+|.+..+-+++-++.|.+.++|.++...+..
T Consensus 133 l~l~~~-p~il~~~~~~~~~----~~~vgF~~e~~~~~~~l~~~a~~kl~~~~~d~vvaN~~~~ 191 (229)
T PRK06732 133 LFLKKT-PKVISYVKKWNPN----ITLVGFKLLVNVSKEELIKVARASLIKNQADYILANDLTD 191 (229)
T ss_pred EEEEEC-hHHHHHHHhhCCC----cEEEEEEeccCCCHHHHHHHHHHHHHHcCCCEEEEecccc
Confidence 356665 6788888764432 1222222223444567788999999999999998877654
No 68
>PF09413 DUF2007: Domain of unknown function (DUF2007); InterPro: IPR018551 This is a family of proteins with unknown function. ; PDB: 2HFV_A.
Probab=23.30 E-value=1.7e+02 Score=20.79 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCCceEEEEcCCCCCCcccccCccccceecccccccceEEEEeCCceEEEEecccHHHHHhh
Q 015779 5 LAALRSLMSSHDPPLHALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITMNEALLWTDGRYFLQATQE 77 (400)
Q Consensus 5 l~~lr~~m~~~~~~lDa~li~~~D~h~~e~~~~~~~~~~yltGf~gs~g~~li~~~~a~l~vd~Ry~~qa~~~ 77 (400)
...++..|+++| |.+++....+ ... .|+.|..|. .-+||+...+++|++=
T Consensus 12 a~~i~~~L~~~g--I~~~v~~~~~-----------~~~---~g~~g~~~~-------~~v~V~~~d~~~A~~i 61 (67)
T PF09413_consen 12 AELIKGLLEENG--IPAFVKNEHM-----------SGY---AGEPGTGGQ-------VEVYVPEEDYERAREI 61 (67)
T ss_dssp HHHHHHHHHHTT----EE--S---------------SS------S--SSS-------EEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHHhCC--CcEEEECCcc-----------chh---hcccCccCc-------eEEEECHHHHHHHHHH
Confidence 456889999988 9998865442 111 444333322 4578877777777653
No 69
>PF04555 XhoI: Restriction endonuclease XhoI; InterPro: IPR007636 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry represents type II restriction enzymes such as XhoI (3.1.21.4 from EC), which recognises the double-stranded sequence CTCGAG and cleave after C-1 [].; GO: 0003677 DNA binding, 0009036 Type II site-specific deoxyribonuclease activity, 0009307 DNA restriction-modification system
Probab=23.09 E-value=1.5e+02 Score=26.40 Aligned_cols=35 Identities=31% Similarity=0.414 Sum_probs=28.2
Q ss_pred CCCCCCCCcccccccccCccHHHHHHHHHHHHhhc
Q 015779 148 RPPVETYPVTVQQIEFAGSSVVEKLKELREKLTNE 182 (400)
Q Consensus 148 K~~~e~~~i~~~~~~~~G~s~~~ki~~lr~~l~~~ 182 (400)
+|-...+|-|..+..|.|.||..|-+.+.+.|-..
T Consensus 136 ~pVr~~~phFpv~p~F~g~SY~~Ry~ilc~rLv~e 170 (196)
T PF04555_consen 136 RPVRVSEPHFPVDPEFKGASYLKRYEILCERLVQE 170 (196)
T ss_pred CCCcCCCCCCCccHHhcCCcHHHHHHHHHHHHHHh
Confidence 34445578899999999999999999998877544
No 70
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=22.77 E-value=88 Score=27.71 Aligned_cols=60 Identities=15% Similarity=0.165 Sum_probs=37.9
Q ss_pred eecCccccHHHHHH-hhcCCcEEEeCccHHHHHHHHHhcCCCC--CCCC-----CCCcEEEECCCcccHHHHhcc
Q 015779 226 YVDKRKVSSEVISF-LKESGVEVRDYDAVSSDVVLLQSNQLNP--PADV-----QGSDLIWADPNSCSYALYSKL 292 (400)
Q Consensus 226 ~vd~r~~~~~~~~~-~~~~g~~~~~~~~i~~~l~~l~~~~~~~--h~~~-----~~~~~v~id~~~~~~~~y~~l 292 (400)
++++.++...+... +...|.....|..+ +.++.++. |..| +.++.|.+|.+ +.+.+|...
T Consensus 24 G~te~ei~~~~~~~~~~~~g~~~~~~~~~------~~~g~~~~~~~~~~~~~~l~~gd~v~id~~-~~~~gy~~d 91 (207)
T PF00557_consen 24 GMTEYEIAAAIERAMLRRHGGEEPAFPPI------VGSGPNTDLPHYTPTDRRLQEGDIVIIDFG-PRYDGYHAD 91 (207)
T ss_dssp TCBHHHHHHHHHHHHHHHTTTTEESSESE------EEECCCCGETTTBCCSSBESTTEEEEEEEE-EEETTEEEE
T ss_pred CCcHHHHHHHHHHHHHHHcCCCcccCCce------EecCCcceecceeccceeeecCCcceeecc-ceeeeeEee
Confidence 56677777766665 44456555555544 44555544 5444 56789999987 777777654
No 71
>COG3636 Predicted transcriptional regulator [Transcription]
Probab=21.90 E-value=1.9e+02 Score=22.88 Aligned_cols=19 Identities=5% Similarity=0.211 Sum_probs=13.4
Q ss_pred HhcCCHHHHhhHHHHHHHH
Q 015779 308 KAIKNPVELDGLKKAHIRD 326 (400)
Q Consensus 308 RaiK~~~EI~~mr~A~~~d 326 (400)
--.+|+++|+..-.++.-+
T Consensus 15 e~l~~ee~ia~yL~~~le~ 33 (100)
T COG3636 15 ELLTDEEAIAAYLNAALEE 33 (100)
T ss_pred HHhCCHHHHHHHHHHHHHc
Confidence 3468899998887766433
No 72
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=21.61 E-value=1.6e+02 Score=26.92 Aligned_cols=23 Identities=0% Similarity=-0.110 Sum_probs=19.3
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Q 015779 316 LDGLKKAHIRDGAAIVQYIIWLD 338 (400)
Q Consensus 316 I~~mr~A~~~d~~a~~~~l~~l~ 338 (400)
|+.||+|..+.+.++...+..++
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~ 23 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIR 23 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc
Confidence 57899999998899988876666
No 73
>PRK03094 hypothetical protein; Provisional
Probab=20.59 E-value=1.7e+02 Score=22.27 Aligned_cols=24 Identities=17% Similarity=0.282 Sum_probs=16.1
Q ss_pred HHHHHHHhhcCC------------CCceEEEEcCCC
Q 015779 5 LAALRSLMSSHD------------PPLHALVVPSED 28 (400)
Q Consensus 5 l~~lr~~m~~~~------------~~lDa~li~~~D 28 (400)
|..+++.|+++| .++||++++..|
T Consensus 10 Ls~i~~~L~~~GYeVv~l~~~~~~~~~Da~VitG~d 45 (80)
T PRK03094 10 LTDVQQALKQKGYEVVQLRSEQDAQGCDCCVVTGQD 45 (80)
T ss_pred cHHHHHHHHHCCCEEEecCcccccCCcCEEEEeCCC
Confidence 667888887776 136666666664
Done!