Query 015782
Match_columns 400
No_of_seqs 345 out of 2455
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 18:35:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015782.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015782hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hqi_A Speckle-type POZ protei 100.0 4.2E-57 1.4E-61 426.7 30.1 300 20-346 3-312 (312)
2 3htm_A Speckle-type POZ protei 100.0 2.5E-31 8.4E-36 228.6 16.0 160 170-346 12-172 (172)
3 3hve_A Gigaxonin; ubiquitin, c 100.0 3.3E-30 1.1E-34 235.9 15.5 191 176-392 15-208 (256)
4 3i3n_A Kelch-like protein 11; 100.0 1.6E-29 5.5E-34 234.2 10.4 188 176-389 16-213 (279)
5 4eoz_A Speckle-type POZ protei 100.0 5.2E-29 1.8E-33 207.9 9.9 142 170-328 3-145 (145)
6 3ivv_A Speckle-type POZ protei 99.9 2.5E-26 8.4E-31 191.5 13.0 135 17-161 4-144 (145)
7 4ghu_A TNF receptor-associated 99.9 1.6E-25 5.6E-30 195.1 11.0 139 21-161 37-188 (198)
8 4gjh_A TNF receptor-associated 99.9 3.7E-25 1.3E-29 190.4 11.1 138 20-161 20-174 (178)
9 2if5_A Zinc finger and BTB dom 99.9 1.6E-24 5.6E-29 174.5 10.2 110 176-302 9-119 (120)
10 2foj_A Ubiquitin carboxyl-term 99.9 3.7E-24 1.3E-28 180.4 12.5 127 22-161 17-149 (155)
11 1lb6_A TNF receptor-associated 99.9 3.4E-24 1.2E-28 181.5 12.3 139 21-161 2-157 (160)
12 1r29_A B-cell lymphoma 6 prote 99.9 6E-24 2E-28 172.9 11.6 114 175-305 12-126 (127)
13 2gkw_A TNF receptor-associated 99.9 3.9E-24 1.3E-28 186.1 9.3 135 22-160 38-187 (192)
14 2z8h_A Transcription regulator 99.9 3.4E-24 1.2E-28 176.9 8.2 120 173-310 17-137 (138)
15 2vkp_A BTB/POZ domain-containi 99.9 1E-23 3.5E-28 166.8 10.6 103 186-305 2-108 (109)
16 1ca9_A TRAF2, protein (TNF rec 99.9 5.9E-24 2E-28 185.4 9.6 135 21-160 40-190 (192)
17 3b84_A Zinc finger and BTB dom 99.9 1.2E-23 4.1E-28 169.0 9.5 110 176-305 8-117 (119)
18 1d00_A Tumor necrosis factor r 99.9 1.4E-23 4.6E-28 179.3 9.7 135 21-160 16-166 (168)
19 2ppi_A Gigaxonin; BTB domain, 99.9 1.5E-23 5E-28 174.2 9.6 110 176-302 31-143 (144)
20 2vpk_A Myoneurin; transcriptio 99.9 5E-23 1.7E-27 164.7 11.6 107 177-303 7-115 (116)
21 2yy9_A Zinc finger and BTB dom 99.9 2E-23 6.8E-28 171.5 9.4 113 177-309 10-122 (135)
22 1buo_A POZ domain, protein (pr 99.9 3.3E-23 1.1E-27 167.0 10.3 109 176-305 12-120 (121)
23 1flk_A TNF receptor associated 99.9 2.3E-23 7.8E-28 186.0 8.9 137 21-161 73-224 (228)
24 3ohu_A Transcription regulator 99.9 1.6E-23 5.3E-28 170.0 2.8 109 176-302 16-125 (125)
25 2q81_A MIZ-1 protein; BTB/POZ 99.9 6.5E-23 2.2E-27 164.7 6.2 107 176-303 11-117 (119)
26 2ihc_A Transcription regulator 99.9 1.9E-23 6.4E-28 169.2 2.2 112 174-303 11-123 (124)
27 3ga1_A Nucleus accumbens-assoc 99.9 9.7E-23 3.3E-27 166.2 5.8 110 176-305 17-127 (129)
28 3m5b_A Zinc finger and BTB dom 99.8 5.1E-21 1.7E-25 153.3 8.1 103 175-304 15-117 (119)
29 2f1z_A Ubiquitin carboxyl-term 99.8 2.2E-20 7.4E-25 187.6 13.1 128 21-161 28-161 (522)
30 3fkc_A Transcriptional regulat 99.8 1.9E-20 6.4E-25 149.5 9.7 100 176-296 15-115 (116)
31 2ast_A S-phase kinase-associat 99.4 9.4E-13 3.2E-17 110.5 9.1 130 195-325 3-148 (159)
32 4gwm_A Meprin A subunit beta; 99.4 2.8E-12 9.6E-17 127.8 12.3 134 19-161 401-567 (592)
33 4ajy_C Transcription elongatio 99.1 1.5E-10 5.2E-15 88.4 8.5 82 195-291 4-97 (97)
34 1fs1_B SKP1, cyclin A/CDK2-ass 99.0 7.2E-10 2.5E-14 90.7 7.7 112 195-310 4-125 (141)
35 2p1m_A SKP1-like protein 1A; F 98.9 3.6E-10 1.2E-14 94.6 2.9 125 195-322 6-144 (160)
36 3drz_A BTB/POZ domain-containi 98.6 3.9E-07 1.3E-11 70.5 11.0 94 194-304 7-106 (107)
37 2fnj_C Transcription elongatio 98.4 7.6E-07 2.6E-11 67.4 6.8 84 195-291 3-96 (96)
38 1hv2_A Elongin C, ELC1; protei 98.4 8.4E-07 2.9E-11 67.5 7.0 91 194-291 5-99 (99)
39 3v7d_A Suppressor of kinetocho 98.3 3.7E-06 1.3E-10 70.6 10.7 127 194-321 8-151 (169)
40 2eqx_A Kelch repeat and BTB do 98.1 2.1E-06 7.1E-11 66.3 4.1 75 303-389 5-79 (105)
41 1vcb_B Protein (elongin C); tu 97.9 1.9E-05 6.4E-10 61.4 5.7 90 194-291 18-112 (112)
42 3drx_A BTB/POZ domain-containi 97.8 6.7E-05 2.3E-09 64.0 7.9 94 194-304 13-112 (202)
43 3kvt_A Potassium channel prote 96.9 0.00068 2.3E-08 52.7 3.6 95 194-305 6-105 (115)
44 1t1d_A Protein (potassium chan 96.5 0.0038 1.3E-07 47.1 5.3 84 195-295 3-90 (100)
45 1s1g_A Potassium voltage-gated 96.4 0.0068 2.3E-07 47.7 6.6 90 193-302 13-109 (124)
46 2nz0_B Potassium voltage-gated 96.0 0.013 4.6E-07 47.0 6.5 84 191-294 33-121 (140)
47 1nn7_A Potassium channel KV4.2 95.8 0.0095 3.2E-07 45.4 4.4 80 195-294 2-86 (105)
48 2eqx_A Kelch repeat and BTB do 90.3 0.66 2.2E-05 34.9 6.3 27 279-305 13-39 (105)
49 2r9r_B Paddle chimera voltage 87.0 1 3.4E-05 44.4 6.6 85 194-295 53-141 (514)
50 2vkp_A BTB/POZ domain-containi 83.8 0.79 2.7E-05 34.4 3.3 32 306-337 77-108 (109)
51 1r29_A B-cell lymphoma 6 prote 71.9 2.9 0.0001 32.2 3.4 32 306-337 95-126 (127)
52 3htm_A Speckle-type POZ protei 71.1 4 0.00014 33.2 4.2 28 279-306 137-164 (172)
53 1buo_A POZ domain, protein (pr 67.3 4.8 0.00017 30.6 3.7 32 306-337 89-120 (121)
54 3v0r_A Major allergen ALT A 1; 67.2 1.3 4.3E-05 34.3 0.2 30 22-53 10-39 (133)
55 2yy9_A Zinc finger and BTB dom 66.8 2 6.8E-05 33.7 1.4 34 306-339 87-120 (135)
56 2q81_A MIZ-1 protein; BTB/POZ 66.6 4.8 0.00016 30.6 3.5 30 306-335 88-117 (119)
57 2vpk_A Myoneurin; transcriptio 65.0 5.3 0.00018 30.1 3.5 30 306-335 86-115 (116)
58 2if5_A Zinc finger and BTB dom 64.9 6.5 0.00022 29.7 4.0 29 306-334 91-119 (120)
59 3i3n_A Kelch-like protein 11; 64.0 11 0.00037 33.4 5.9 59 279-337 144-216 (279)
60 2z8h_A Transcription regulator 63.6 1.8 6.2E-05 34.1 0.6 33 306-338 101-133 (138)
61 3b84_A Zinc finger and BTB dom 63.2 3.3 0.00011 31.5 2.0 32 306-337 86-117 (119)
62 3hqi_A Speckle-type POZ protei 59.1 8.2 0.00028 34.9 4.2 28 279-306 277-304 (312)
63 2ppi_A Gigaxonin; BTB domain, 52.5 5.7 0.00019 31.5 1.7 29 306-334 115-143 (144)
64 4eoz_A Speckle-type POZ protei 49.7 6.8 0.00023 30.6 1.8 33 306-338 91-123 (145)
65 3m5b_A Zinc finger and BTB dom 48.9 11 0.00037 28.7 2.8 31 306-336 87-117 (119)
66 3hve_A Gigaxonin; ubiquitin, c 40.0 39 0.0013 29.2 5.4 32 306-337 99-130 (256)
67 2plx_B Peptide inhibitor; heli 39.9 26 0.00087 18.0 2.3 21 313-333 3-23 (26)
68 3ga1_A Nucleus accumbens-assoc 38.8 4.6 0.00016 31.2 -0.9 33 305-337 95-127 (129)
69 2ast_A S-phase kinase-associat 38.0 59 0.002 25.9 5.8 43 295-339 85-127 (159)
70 2ihc_A Transcription regulator 25.1 3.9 0.00013 31.4 -3.5 30 306-335 94-123 (124)
71 1fs1_B SKP1, cyclin A/CDK2-ass 21.2 2.9E+02 0.0098 21.3 7.9 44 294-339 79-122 (141)
No 1
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=100.00 E-value=4.2e-57 Score=426.71 Aligned_cols=300 Identities=36% Similarity=0.663 Sum_probs=251.2
Q ss_pred ceeceEEEEEEcCccccccCCCCCeEeeceeeecCe---EEEEEEecCCCCCCCCCCeEEEEEEEec-CCccceeEEEEE
Q 015782 20 ETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGGY---QWAIYFYPDGKNPEDNSAYVSVFIALAN-EGTDVRALFELT 95 (400)
Q Consensus 20 ~~~~~~~~w~I~nfs~~~~~~~~~~~~S~~f~~gg~---~W~l~lyp~g~~~~~~~~~lsl~L~~~~-~~w~v~~~~~~~ 95 (400)
++..++|+|+|.|||.++ .+.|+.++|++|.+||+ +|+|++||+|.+. ++++|+|+||.|.+ .+|++.|+|+++
T Consensus 3 ~~~~~~~~w~I~nfs~~~-~~~~~~i~S~~F~~gg~~~~~W~i~~yP~G~~~-~~~~~lslyL~~~~~~~~~v~a~~~~~ 80 (312)
T 3hqi_A 3 KVVKFSYMWTINNFSFCR-EEMGEVIKSSTFSSGANDKLKWCLRVNPKGLDE-ESKDYLSLYLLLVSCPKSEVRAKFKFS 80 (312)
T ss_dssp EEEEEEEEEEETTGGGCC-CCTTCCEECCCBCC--CCCCEEEEEEETTCCC---CTTEEEEEEEEEECCC-CEEEEEEEE
T ss_pred ceEEEEEEEEEcCcchhh-hcCCCeEeeCCcccCCCCCceEEEEEECCCCCc-cCCCcEEEEEEEcCCCCCcEEEEEEEE
Confidence 467899999999999987 46789999999999984 9999999999873 46799999999976 579999999999
Q ss_pred EecCCCCCccceecccccccccCCceecccCccccchhhhchhhh--ccCCCCCCCcEEEEEEeeeeeeee---ccCCcc
Q 015782 96 LLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVVSAI---DCSRLH 170 (400)
Q Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~wG~~~fi~~~~L--~~~~~l~~d~l~i~~~v~i~~~~~---~~~~~~ 170 (400)
|+|++++....... ...++|.. +.+|||++|++|++| +.+||+.||+++|+|+|.|..... ......
T Consensus 81 l~~~~~~~~~~~~~-------~~~~~F~~-~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~~~~~~~ 152 (312)
T 3hqi_A 81 ILNAKGEETKAMES-------QRAYRFVQ-GKDWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMN 152 (312)
T ss_dssp EECTTSCEEEEEEC-------SSCEEECT-TCEEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEECCCCCS
T ss_pred EEeCCCCccccccc-------CCceeCCC-CCCcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEecccccccccccc
Confidence 99998765432211 13456653 468999999999999 457999999999999999986432 222345
Q ss_pred cccCCCCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccc-cceEEEcCCCHHHHHHHhhh
Q 015782 171 SIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLHF 249 (400)
Q Consensus 171 ~~~~~~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~-~~~i~l~~~~~~~f~~~L~~ 249 (400)
.+.+|++.+.+++.++++++.++||+|.++|++|+|||.|||++|+||++||.+++.|+ ..+|.|+++++++|+.+|+|
T Consensus 153 ~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~ 232 (312)
T 3hqi_A 153 MVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCF 232 (312)
T ss_dssp SCCCCCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHH
T ss_pred ccCCCCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHh
Confidence 67899999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred hccCCCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCCCHHHHHHHHHHHHHcCchHHHHH
Q 015782 250 IYRDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATELKAV 329 (400)
Q Consensus 250 iYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~~ 329 (400)
+|+|.++.... .+.+||.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++..|++.
T Consensus 233 iYt~~~~~~~~-----------------~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~ 295 (312)
T 3hqi_A 233 IYTGKAPNLDK-----------------MADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQ 295 (312)
T ss_dssp HHHSCCTTHHH-----------------HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCCCCChHH-----------------HHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999876543 3999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHcccc
Q 015782 330 CLRFAAENLAAVMRSDG 346 (400)
Q Consensus 330 ~~~~i~~~~~~v~~~~~ 346 (400)
|++||..|+.+++++++
T Consensus 296 ~~~~i~~~~~~v~~s~g 312 (312)
T 3hqi_A 296 AVDFINYHATDVLETSG 312 (312)
T ss_dssp HHHHHHHTC--------
T ss_pred HHHHHHHHHHHHhhCCC
Confidence 99999999999987753
No 2
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=228.60 Aligned_cols=160 Identities=42% Similarity=0.697 Sum_probs=145.9
Q ss_pred ccccCCCCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccc-cceEEEcCCCHHHHHHHhh
Q 015782 170 HSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLH 248 (400)
Q Consensus 170 ~~~~~~~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~-~~~i~l~~~~~~~f~~~L~ 248 (400)
..+++|++.+.+++.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.|+ ...|.++++++++|+.+|+
T Consensus 12 ~~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~ 91 (172)
T 3htm_A 12 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 91 (172)
T ss_dssp CCSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHH
Confidence 457788999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hhccCCCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCCCHHHHHHHHHHHHHcCchHHHH
Q 015782 249 FIYRDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATELKA 328 (400)
Q Consensus 249 ~iYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~ 328 (400)
|+|+|.+..... + +.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|+++.|++
T Consensus 92 ~~Yt~~~~~~~~-------~----------~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~ 154 (172)
T 3htm_A 92 FIYTGKAPNLDK-------M----------ADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 154 (172)
T ss_dssp HHHHSCCTTGGG-------T----------HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHH
T ss_pred HHhCCCCCCcHH-------H----------HHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHH
Confidence 999999986655 3 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHcccc
Q 015782 329 VCLRFAAENLAAVMRSDG 346 (400)
Q Consensus 329 ~~~~~i~~~~~~v~~~~~ 346 (400)
.|++||.+|+.+++.+++
T Consensus 155 ~~~~~i~~~~~~v~~s~~ 172 (172)
T 3htm_A 155 QAVDFINYHATDVLETSG 172 (172)
T ss_dssp HHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 999999999999987653
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.97 E-value=3.3e-30 Score=235.88 Aligned_cols=191 Identities=19% Similarity=0.263 Sum_probs=155.3
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccc--cc-cceEEEcCCCHHHHHHHhhhhcc
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELE--ED-KQEIIISDLEPKVFKAMLHFIYR 252 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~--e~-~~~i~l~~~~~~~f~~~L~~iYt 252 (400)
++.+.+.+.+++.++.++||+|.+||+.|+|||.||+++|+||++||.+++. |+ ...|.++++++++|+.+|+|+||
T Consensus 15 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt 94 (256)
T 3hve_A 15 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 94 (256)
T ss_dssp HHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccC
Confidence 4568899999999999999999999999999999999999999999999887 55 88999999999999999999999
Q ss_pred CCCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCCCHHHHHHHHHHHHHcCchHHHHHHHH
Q 015782 253 DTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATELKAVCLR 332 (400)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~ 332 (400)
|.+.++.+ + +.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++..|++.|.+
T Consensus 95 ~~~~i~~~-------~----------v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~ 157 (256)
T 3hve_A 95 GQIRLNED-------T----------IQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATE 157 (256)
T ss_dssp SCCCCC-C-------C----------HHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcccHh-------H----------HHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHH
Confidence 99986655 4 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHcccchhHHHhhChHHHHHHHHHhhcccccCCCCCCcchhhhhhccCCCcc
Q 015782 333 FAAENLAAVMRSDGFEYLKENCPSLQSELLKTVAGCEEDCSSGGKSRSVWAQLSDGGDTN 392 (400)
Q Consensus 333 ~i~~~~~~v~~~~~f~~l~~~~p~l~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (400)
||..|+.++..+++|.+|+ .+.+..++..+...+. .+..+|..+-.|..-+
T Consensus 158 ~i~~~f~~v~~~~~f~~L~-------~~~l~~lL~~d~L~v~--~E~~v~~av~~W~~~~ 208 (256)
T 3hve_A 158 YLETHFRDVSSTEEFLELS-------PQKLKEVISLEKLNVG--NERYVFEAVIRWIAHD 208 (256)
T ss_dssp HHHHHHHHHTTCHHHHSSC-------HHHHHHHHHCC---------CTTHHHHTTTCCC-
T ss_pred HHHHHHHHHhCCcchhcCC-------HHHHHHHHccCCCCCC--CHHHHHHHHHHHHHcC
Confidence 9999999999999999887 3344444444444332 2345677766666544
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.96 E-value=1.6e-29 Score=234.18 Aligned_cols=188 Identities=22% Similarity=0.300 Sum_probs=157.6
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeC---CeEEeeeehhhhccCHHHHHhhcCccccc-cceEEEc------CCCHHHHHH
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVA---GEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIIS------DLEPKVFKA 245 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~---~~~f~~hk~iLa~~S~~F~~~f~~~~~e~-~~~i~l~------~~~~~~f~~ 245 (400)
++.+.+.+.+++.++.++||+|.|| |+.|+|||.||+++|+||++||.+++.|+ ...|.++ ++++++|+.
T Consensus 16 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ 95 (279)
T 3i3n_A 16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEA 95 (279)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHH
Confidence 4567889999999999999999998 99999999999999999999999999999 8999998 899999999
Q ss_pred HhhhhccCCCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCCCHHHHHHHHHHHHHcCchH
Q 015782 246 MLHFIYRDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATE 325 (400)
Q Consensus 246 ~L~~iYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~ 325 (400)
+|+|+|||.+.++.. + +.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|++..
T Consensus 96 ll~~~Ytg~~~i~~~-------~----------v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~ 158 (279)
T 3i3n_A 96 VIEYMYTGRIRVSTG-------S----------VHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQ 158 (279)
T ss_dssp HHHHHHHSEEEEETT-------T----------HHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHH
T ss_pred HHHhhCcCCcccCHH-------H----------HHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHH
Confidence 999999999876554 4 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHcccchhHHHhhChHHHHHHHHHhhcccccCCCCCCcchhhhhhccCC
Q 015782 326 LKAVCLRFAAENLAAVMRSDGFEYLKENCPSLQSELLKTVAGCEEDCSSGGKSRSVWAQLSDGG 389 (400)
Q Consensus 326 L~~~~~~~i~~~~~~v~~~~~f~~l~~~~p~l~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (400)
|.+.|.+||..|+.++..+++|.+|+ .+.+..++..+...+. .+..+|..+-.|.
T Consensus 159 L~~~~~~~i~~~f~~v~~~~~f~~L~-------~~~l~~lL~~d~L~v~--sE~~vf~av~~W~ 213 (279)
T 3i3n_A 159 LALKAADMIRRNFHKVIQDEEFYTLP-------FHLIRDWLSDLEITVD--SEEVLFETVLKWV 213 (279)
T ss_dssp HHHHHHHHHHHTHHHHTTSSGGGGSC-------HHHHHHHHTCSSCCCS--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcChhcCC-------HHHHHHHhcCcCCCCC--CHHHHHHHHHHHH
Confidence 99999999999999999999999887 3455555655544443 2344555444444
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.96 E-value=5.2e-29 Score=207.87 Aligned_cols=142 Identities=45% Similarity=0.740 Sum_probs=108.1
Q ss_pred ccccCCCCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccc-cceEEEcCCCHHHHHHHhh
Q 015782 170 HSIQVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLH 248 (400)
Q Consensus 170 ~~~~~~~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~-~~~i~l~~~~~~~f~~~L~ 248 (400)
+.+++|++.+.+++.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.|+ ...|.++++++++|+.+|+
T Consensus 3 ~~v~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~ 82 (145)
T 4eoz_A 3 NMVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 82 (145)
T ss_dssp --CCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHH
T ss_pred CcccCChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999988 8999999999999999999
Q ss_pred hhccCCCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCCCHHHHHHHHHHHHHcCchHHHH
Q 015782 249 FIYRDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNSVAKILSLADEHHATELKA 328 (400)
Q Consensus 249 ~iYt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~ 328 (400)
|+|+|.+....+ + +.+|+.+|++|+++.|+..|+++|.+.++.+|++.++.+|..|+++.|++
T Consensus 83 ~~Y~~~~~~~~~-------~----------~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 83 FIYTGKAPNLDK-------M----------ADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp HHHHSCCTTGGG-------T----------HHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred hhccCccCCcHH-------H----------HHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 999999986555 3 99999999999999999999999999999999999999999999998874
No 6
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=99.94 E-value=2.5e-26 Score=191.46 Aligned_cols=135 Identities=29% Similarity=0.616 Sum_probs=112.6
Q ss_pred eecceeceEEEEEEcCccccccCCCCCeEeeceeeecCe---EEEEEEecCCCCCCCCCCeEEEEEEEecC-CccceeEE
Q 015782 17 SVTETVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGGY---QWAIYFYPDGKNPEDNSAYVSVFIALANE-GTDVRALF 92 (400)
Q Consensus 17 ~~~~~~~~~~~w~I~nfs~~~~~~~~~~~~S~~f~~gg~---~W~l~lyp~g~~~~~~~~~lsl~L~~~~~-~w~v~~~~ 92 (400)
.+.+++.++|+|+|+|||.+++ +.|+.++|++|.+||+ +|+|++||+|++. ++.+|||+||.|.+. .|++.|+|
T Consensus 4 ~m~~~~~~~~~w~I~~fs~~~~-~~g~~~~S~~F~~gg~~g~~W~i~~yP~G~~~-~~~~~lSlyL~l~~~~~w~v~a~f 81 (145)
T 3ivv_A 4 GSGKVVKFSYMWTINNFSFCRE-EMGEVIKSSTFSSGANDKLKWCLRVNPKGLDE-ESKDYLSLYLLLVSCPKSEVRAKF 81 (145)
T ss_dssp -CCCCCEEEEEEEESSGGGCCC-CTTCCEECCCEEESGGGCEEEEEEEETTCSSG-GGTTEEEEEEEEEECSSSEEEEEE
T ss_pred CCCcEEEEEEEEEEcCchHHhh-cCCCEEECCCcCCCCcCCceEEEEEEcCCCCC-CCCCeEEEEEEEcCCCCCcEEEEE
Confidence 4566788999999999999875 5688999999999985 9999999999873 457999999999764 79999999
Q ss_pred EEEEecCCCCCccceecccccccccCCceecccCccccchhhhchhhh--ccCCCCCCCcEEEEEEeeeee
Q 015782 93 ELTLLDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVV 161 (400)
Q Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~wG~~~fi~~~~L--~~~~~l~~d~l~i~~~v~i~~ 161 (400)
+++|+||+++...... ....++|. +..+|||++|+++++| ++++||.||+++|+|+|.|++
T Consensus 82 ~l~llnq~~~~~~~~~-------~~~~~~F~-~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 82 KFSILNAKGEETKAME-------SQRAYRFV-QGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp EEEEECTTSCEEEEEE-------CSSCEEEE-TTCEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred EEEEEecCCCceeeec-------ccceEEec-CCCCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 9999999876432211 11346665 4678999999999999 668999999999999999864
No 7
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.92 E-value=1.6e-25 Score=195.12 Aligned_cols=139 Identities=24% Similarity=0.319 Sum_probs=111.0
Q ss_pred eeceEEEEEEcCcccccc---CCCCCeEeeceeeec--CeEEEEEEecCCCCCCCCCCeEEEEEEEecC------Cccce
Q 015782 21 TVNGSHKFVIQGYSLAKG---MGIGKHIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVR 89 (400)
Q Consensus 21 ~~~~~~~w~I~nfs~~~~---~~~~~~~~S~~f~~g--g~~W~l~lyp~g~~~~~~~~~lsl~L~~~~~------~w~v~ 89 (400)
+..|+|+|+|+|||.+++ ++.|++++|++|++| ||+|+|++||||++. +.++|||+||.+.++ +|++.
T Consensus 37 ~~~g~~~w~I~nfS~~~~~~~~~~g~~i~S~~F~vg~~Gy~W~i~~yPnG~~~-~~~~~lSlyL~l~~g~~D~~l~wp~~ 115 (198)
T 4ghu_A 37 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM-GKGTHLSLFFVIMRGEYDALLPWPFK 115 (198)
T ss_dssp CSSSEEEEEECCHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred ccccEEEEEECCHHHHHhhhccCCCcEEECCCeEECCCCcEEEEEEEeCCCCC-CCCCeEEEEEEecCCccCCCCCceEE
Confidence 567999999999999886 577899999999999 999999999999873 457999999998742 69999
Q ss_pred eEEEEEEecCCCCCccceeccccc--ccccCCceecccCccccchhhhchhhhccCCCCCCCcEEEEEEeeeee
Q 015782 90 ALFELTLLDQSGKGKHKVHSHFDR--SLESGPYTLKYRGSMWGYKRFFRRAMLETSDYLKDDCLKINCTVGVVV 161 (400)
Q Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~f~~~~~~wG~~~fi~~~~L~~~~~l~~d~l~i~~~v~i~~ 161 (400)
++|+++|+||.++..+... .+.. ........|...+.+|||++|+++++|+++|||+||+++|+|+|.+..
T Consensus 116 a~~~l~Lldq~~~~~~~~~-~~~~~~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~ 188 (198)
T 4ghu_A 116 QKVTLMLMDQGSSRRHLGD-AFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 188 (198)
T ss_dssp CCEEEEECCCSTTCCCEEE-EECCCTTSGGGSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTBEEEEEEECCTT
T ss_pred EEEEEEEEcCCCCccceEE-EeecCcccceecCCcccCcCCcCchhEeEHHHhhhcCCeeCCEEEEEEEEEecc
Confidence 9999999999875433221 1100 000111223445678999999999999989999999999999998864
No 8
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=99.92 E-value=3.7e-25 Score=190.43 Aligned_cols=138 Identities=25% Similarity=0.389 Sum_probs=109.3
Q ss_pred ceeceEEEEEEcCcccccc---CCCCCeEeeceeeec--CeEEEEEEecCCCCCCCCCCeEEEEEEEecC------Cccc
Q 015782 20 ETVNGSHKFVIQGYSLAKG---MGIGKHIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDV 88 (400)
Q Consensus 20 ~~~~~~~~w~I~nfs~~~~---~~~~~~~~S~~f~~g--g~~W~l~lyp~g~~~~~~~~~lsl~L~~~~~------~w~v 88 (400)
.+..|+|+|+|+|||.+++ .+.|.+++|++|.+| ||+|+|++||+|++ .+.++|||+||.|.++ +|++
T Consensus 20 ~~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~~g~~G~~W~i~~yP~G~~-~~~~~~lSlyL~l~~~~~d~~l~W~v 98 (178)
T 4gjh_A 20 ACYSGKLIWKVTDYRVKKREAVEGHTVSVFSQPFYTSRCGYRLCARAYLNGDG-SGKGTHLSLYFVVMRGEFDSLLQWPF 98 (178)
T ss_dssp CCSSSEEEEEECCHHHHHHHHHTTSCCCEECCCEESSTTSCEEEEEEETTCCG-GGTTTEEEEEEEEBCCTTGGGSCSSC
T ss_pred cccceEEEEEECCHHHHHhhhhcCCCcEEECCCeEeCCCCeEEEEEEEECCCC-CCCCCEEEEEEEEecCCCCcccCCce
Confidence 4678999999999999876 455668999999999 99999999999987 3457999999999643 4999
Q ss_pred eeEEEEEEecCCCCCccceecccccccccCCceec----ccCccccchhhhchhhhcc--CCCCCCCcEEEEEEeeeee
Q 015782 89 RALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLK----YRGSMWGYKRFFRRAMLET--SDYLKDDCLKINCTVGVVV 161 (400)
Q Consensus 89 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~wG~~~fi~~~~L~~--~~~l~~d~l~i~~~v~i~~ 161 (400)
.|+|+++|+||+++..+... .+... ...+.|. ..+.+|||++|+++++|++ ++||+||+++|+|+|.|..
T Consensus 99 ~a~~~l~Lldq~~~~~~~~~-~~~~~--~~~~~F~~p~~~~~~~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i~~ 174 (178)
T 4gjh_A 99 RQRVTLMLLDQSGKKNHIVE-TFKAD--PNSSSFKRPDGEMNIASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDLTD 174 (178)
T ss_dssp CCEEEEEECCTTSSCCCEEE-EEECC--TTCGGGSCCSSSBCCCEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECCTT
T ss_pred EEEEEEEEEcCCCCcceeEE-eeccC--CccccccCCcccccCCcChhheeEHHHhhccccCcCcCCEEEEEEEEEecC
Confidence 99999999999876533221 11000 0123343 2356899999999999986 8999999999999998753
No 9
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.91 E-value=1.6e-24 Score=174.51 Aligned_cols=110 Identities=26% Similarity=0.369 Sum_probs=99.4
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccc-cceEEEcCCCHHHHHHHhhhhccCC
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLHFIYRDT 254 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~-~~~i~l~~~~~~~f~~~L~~iYt~~ 254 (400)
++.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.|+ ...|.++++++++|+.+|+|+|+|.
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~ 88 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTAT 88 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCC
Confidence 466788999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred CCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHH
Q 015782 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHL 302 (400)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l 302 (400)
+..+.+ + +.+|+.+|++|+++.|++.|+++|
T Consensus 89 ~~~~~~-------~----------~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 89 LTVSTA-------N----------VGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCCCGG-------G----------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CccCHH-------H----------HHHHHHHHHHhCCHHHHHHHHHHh
Confidence 987655 4 999999999999999999999987
No 10
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=99.91 E-value=3.7e-24 Score=180.36 Aligned_cols=127 Identities=15% Similarity=0.246 Sum_probs=102.8
Q ss_pred eceEEEEEEcCccccccCCCCCeEeeceeeecCeEEEEEEecCCCCCCCCCCeEEEEEEEecC----CccceeEEEEEEe
Q 015782 22 VNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALANE----GTDVRALFELTLL 97 (400)
Q Consensus 22 ~~~~~~w~I~nfs~~~~~~~~~~~~S~~f~~gg~~W~l~lyp~g~~~~~~~~~lsl~L~~~~~----~w~v~~~~~~~l~ 97 (400)
..++|+|+|.|||.++ +.++|++|.+||++|+|.+||+|++..++++|||+||.|... +|++.|+|+++|+
T Consensus 17 ~~~~~~w~I~nfS~~~-----~~~~S~~f~~gg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~~~l~l~ 91 (155)
T 2foj_A 17 SEATFQFTVERFSRLS-----ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKII 91 (155)
T ss_dssp SEEEEEEEESSGGGCC-----SCEECCCEEETTEEEEEEEEEEC------CBEEEEEEEESTTCCCSSCEEEEEEEEEEC
T ss_pred CCcEEEEEECChhhcC-----CceEcCCEEECCccEEEEEEECCCCCCCCCCEEEEEEEeCCCCCCCCCEEEEEEEEEEE
Confidence 5699999999999995 579999999999999999999997631357899999999643 4999999999999
Q ss_pred cCCCCCccceecccccccccCCceecccCccccchhhhchhhhc--cCCCCCCCcEEEEEEeeeee
Q 015782 98 DQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAMLE--TSDYLKDDCLKINCTVGVVV 161 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~wG~~~fi~~~~L~--~~~~l~~d~l~i~~~v~i~~ 161 (400)
|+++...+.... ..+.|.....+|||++|++|++|+ .++||.||+++|+|+|.|.+
T Consensus 92 ~~~~~~~~~~~~--------~~~~F~~~~~~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V~~ 149 (155)
T 2foj_A 92 NYRDDEKSFSRR--------ISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 149 (155)
T ss_dssp CSSCGGGCEEEE--------EEEEEETTBCEEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEECC
T ss_pred cCCCCcceEEec--------cEEEeCCCCCCEeECCeEEHHHhcCcCCCceECCEEEEEEEEEEeC
Confidence 998754321111 235676556789999999999995 68999999999999999854
No 11
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=99.91 E-value=3.4e-24 Score=181.51 Aligned_cols=139 Identities=22% Similarity=0.333 Sum_probs=105.1
Q ss_pred eeceEEEEEEcCcccccc-CCCCC--eEeeceeeec--CeEEEEEEecCCCCCCCCCCeEEEEEEEecC------Cccce
Q 015782 21 TVNGSHKFVIQGYSLAKG-MGIGK--HIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVR 89 (400)
Q Consensus 21 ~~~~~~~w~I~nfs~~~~-~~~~~--~~~S~~f~~g--g~~W~l~lyp~g~~~~~~~~~lsl~L~~~~~------~w~v~ 89 (400)
...|+|+|+|+|||.+++ ++.|+ .++|++|.+| ||+|+|++||+|++.+.+++|||+||.+.++ +|++.
T Consensus 2 ~~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yP~G~~~~~~~~~lSlyL~l~~~~~d~~l~wp~~ 81 (160)
T 1lb6_A 2 QCNGIYIWKIGNFGMHLKCQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQ 81 (160)
T ss_dssp CCCEEEEEEECCHHHHHHHHHTTCCEEEECCCEESSSSCCEEEEEEEECCTTCTTTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCcEEEEEECCHHHHHHhhhcCCCeEEECcCeecCCCCeeEEEEEEecCCCCCCCCCEEEEEEEEeecCCCccCCCcee
Confidence 357999999999999875 55677 8999999999 9999999999998743247899999998642 39999
Q ss_pred eEEEEEEecCCCCCcc-ceecccccccccCCceec-----ccCccccchhhhchhhhccCCCCCCCcEEEEEEeeeee
Q 015782 90 ALFELTLLDQSGKGKH-KVHSHFDRSLESGPYTLK-----YRGSMWGYKRFFRRAMLETSDYLKDDCLKINCTVGVVV 161 (400)
Q Consensus 90 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~f~-----~~~~~wG~~~fi~~~~L~~~~~l~~d~l~i~~~v~i~~ 161 (400)
++|+++|+||.+.... .....+... .....|. ..+.+|||++|+++++|++++||+||+++|+|+|.|+.
T Consensus 82 a~~~l~lldq~~~~~~~~~~~~~~~~--~~~~~f~~p~~~~~~~~~G~~~Fi~~~~L~~~~yl~dD~l~I~~~V~v~~ 157 (160)
T 1lb6_A 82 GTIRLTILDQSEAPVRQNHEEIMDAK--PELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRF 157 (160)
T ss_dssp SEEEEEECCCSCTTSCCCEEEEEECC--TTSGGGSCCSSSBCSEEEEEEEEEEGGGGGTSCCCBTTBEEEEEEEEC--
T ss_pred eeEEEEEEcCCCccccccceEEeecC--CcchhccCCcccCCCCCcCEeeEeEHHHhhhCCCccCCEEEEEEEEEEee
Confidence 9999999999865321 111111100 0011121 11337999999999999989999999999999999864
No 12
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.90 E-value=6e-24 Score=172.95 Aligned_cols=114 Identities=26% Similarity=0.380 Sum_probs=105.7
Q ss_pred CCCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEE-cCCCHHHHHHHhhhhccC
Q 015782 175 PESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIII-SDLEPKVFKAMLHFIYRD 253 (400)
Q Consensus 175 ~~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l-~~~~~~~f~~~L~~iYt~ 253 (400)
.++.+.+.+.+++.++.++||+|.++|+.|+|||.||+++|+||++||.+++.|....|.| +++++++|+.+|+|+|+|
T Consensus 12 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~~~f~~ll~~~Ytg 91 (127)
T 1r29_A 12 HASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTS 91 (127)
T ss_dssp HHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCHHHHHHHHHHHcCC
Confidence 3567889999999999999999999999999999999999999999999998877788999 999999999999999999
Q ss_pred CCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcC
Q 015782 254 TLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (400)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 305 (400)
.+.++.. + +.+|+.+|++|+++.|++.|+++|.++
T Consensus 92 ~~~~~~~-------~----------~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 92 RLNLREG-------N----------IMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCCCTT-------T----------HHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CcCcCHH-------H----------HHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 9987655 4 999999999999999999999999763
No 13
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=99.90 E-value=3.9e-24 Score=186.11 Aligned_cols=135 Identities=24% Similarity=0.382 Sum_probs=106.3
Q ss_pred eceEEEEEEcCccccc-cCCCCC--eEeeceeeec--CeEEEEEEecCCCCCCCCCCeEEEEEEEecC------Ccccee
Q 015782 22 VNGSHKFVIQGYSLAK-GMGIGK--HIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVRA 90 (400)
Q Consensus 22 ~~~~~~w~I~nfs~~~-~~~~~~--~~~S~~f~~g--g~~W~l~lyp~g~~~~~~~~~lsl~L~~~~~------~w~v~~ 90 (400)
..|+|+|+|+|||.++ +++.|+ .++|++|++| ||+|+|++||||++. ++++|+|+||.+.++ +|++.+
T Consensus 38 ~~g~~~w~I~~fS~~~~~~~~g~~~~i~S~~F~vg~~Gykw~i~~yPnG~~~-~~~~~lSlyL~l~~~~~d~~l~wp~~a 116 (192)
T 2gkw_A 38 YNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM-GKGTHLSLFFVIMRGEYDALLPWPFKQ 116 (192)
T ss_dssp CSSEEEEEEECHHHHHHHHHHTSCSCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEECCTTGGGSCSSCCC
T ss_pred cCcEEEEEECCHHHHHHHhhcCCCceEEcccEEECCCCcEEEEEEEeCCCCC-CCCCEEEEEEEEecCCCCccCCCcEEE
Confidence 6799999999999987 345566 6999999999 999999999999873 467999999998642 499999
Q ss_pred EEEEEEecCCCCCccceecccccccccCCceec----ccCccccchhhhchhhhccCCCCCCCcEEEEEEeeee
Q 015782 91 LFELTLLDQSGKGKHKVHSHFDRSLESGPYTLK----YRGSMWGYKRFFRRAMLETSDYLKDDCLKINCTVGVV 160 (400)
Q Consensus 91 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~wG~~~fi~~~~L~~~~~l~~d~l~i~~~v~i~ 160 (400)
+|+++|+||.+...+.... +... ...+.|. ..+.+|||+.|+++++|+++||++||+++|+|+|.|.
T Consensus 117 ~~~l~lldq~~~~~~~~~~-~~~~--~~~~~F~~~~~~~~~~wG~~~Fi~~~~L~~~gyl~dD~l~I~~~V~v~ 187 (192)
T 2gkw_A 117 KVTLMLMDQGSSRRHLGDA-FKPD--PNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTS 187 (192)
T ss_dssp CEEEEECCCSTTCCCEEEE-ECCC--TTCTTSSCCSSSBCCCEEEEEEEEHHHHHHTTSCBTTEEEEEEEECCT
T ss_pred EEEEEEECCCCCccceEEE-EecC--CCcccccCCCCCCcCCCChHHEeEHHHhCcCCCeeCCEEEEEEEEEcC
Confidence 9999999998765432111 1100 0112232 2346799999999999988899999999999999774
No 14
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.90 E-value=3.4e-24 Score=176.89 Aligned_cols=120 Identities=19% Similarity=0.303 Sum_probs=108.5
Q ss_pred cCCCCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEc-CCCHHHHHHHhhhhc
Q 015782 173 QVPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIIS-DLEPKVFKAMLHFIY 251 (400)
Q Consensus 173 ~~~~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~-~~~~~~f~~~L~~iY 251 (400)
+.+++.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.+ ...|.++ +++++.|+.+|+|+|
T Consensus 17 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~v~~~~~~~lL~~~Y 95 (138)
T 2z8h_A 17 SVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA-ELTVTLPEEVTVKGFEPLIQFAY 95 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT-TEEEECCTTSCHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC-CceEEeCCCCCHHHHHHHHHHhc
Confidence 34456788999999999999999999999999999999999999999999988766 3578885 899999999999999
Q ss_pred cCCCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCCCHHH
Q 015782 252 RDTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNS 310 (400)
Q Consensus 252 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n 310 (400)
+|.+.+..+ | +.+|+.+|++|+++.|++.|+++|.+.++.+|
T Consensus 96 tg~~~i~~~-------~----------v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 96 TAKLILSKD-------N----------VDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HSCCCCCTT-------T----------HHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred CCCcccCHH-------H----------HHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 999986655 4 99999999999999999999999999887655
No 15
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.90 E-value=1e-23 Score=166.80 Aligned_cols=103 Identities=34% Similarity=0.562 Sum_probs=90.9
Q ss_pred hhhCCCCCcEEEEeCC----eEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCCCCCCccc
Q 015782 186 LLDNAESSDITFDVAG----EKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTLTEDVDV 261 (400)
Q Consensus 186 l~~~~~~sDv~l~v~~----~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~ 261 (400)
|++++.++||+|.++| +.|+|||.||+++|+||++||.+++.|+...|.++++++++|+.+|+|+|+|.+..+.+
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~l~~iYt~~~~~~~~- 80 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVKSEIHIPDVEPAAFLILLKYMYSDEIDLEAD- 80 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------CCEEEETTSCHHHHHHHHHHHHHCCCCCCTT-
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCCCeEEeCCCCHHHHHHHHHHHcCCCccCCHH-
Confidence 6788999999999998 89999999999999999999999988877889999999999999999999999986655
Q ss_pred CcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcC
Q 015782 262 DVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (400)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 305 (400)
| +.+|+.+|++|+++.|+..|+++|.+.
T Consensus 81 ------~----------~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 81 ------T----------VLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp ------T----------HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ------H----------HHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 4 999999999999999999999999764
No 16
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=99.90 E-value=5.9e-24 Score=185.35 Aligned_cols=135 Identities=20% Similarity=0.316 Sum_probs=105.7
Q ss_pred eeceEEEEEEcCcccccc-CCCCC--eEeeceeee--cCeEEEEEEecCCCCCCCCCCeEEEEEEEecC------Cccce
Q 015782 21 TVNGSHKFVIQGYSLAKG-MGIGK--HIASDNFTV--GGYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVR 89 (400)
Q Consensus 21 ~~~~~~~w~I~nfs~~~~-~~~~~--~~~S~~f~~--gg~~W~l~lyp~g~~~~~~~~~lsl~L~~~~~------~w~v~ 89 (400)
...++|+|+|.|||.+++ .+.|+ .++||+|.+ ||++|+|++||+|++ .++++|||+||.+.++ +|++.
T Consensus 40 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~v~~gG~~W~i~~yP~G~~-~~~~~~lSlyL~l~~~~~~~~~~W~~~ 118 (192)
T 1ca9_A 40 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDG-TGRGTHLSLFFVVMKGPNDALLRWPFN 118 (192)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCG-GGTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCceEEEEECCHHHHHHHhhcCCCceEECceEEeCCCCeEEEEEEEeCCCC-CCCCCEEEEEEEEccCCCCCcCCCceE
Confidence 467999999999999875 34565 699999999 999999999999987 3357999999998653 59999
Q ss_pred eEEEEEEecCCCCCccceecccccccccCCceec----ccCccccchhhhchhhhc-cCCCCCCCcEEEEEEeeee
Q 015782 90 ALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLK----YRGSMWGYKRFFRRAMLE-TSDYLKDDCLKINCTVGVV 160 (400)
Q Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~wG~~~fi~~~~L~-~~~~l~~d~l~i~~~v~i~ 160 (400)
++|+++|+|+++.... ...+... .....|. ..+.+|||+.|+++++|+ .+||+.||+++|+|+|.|.
T Consensus 119 a~~~l~lldq~~~~~~--~~~~~~~--~~~~~f~rp~~~~~~~wG~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~V~ 190 (192)
T 1ca9_A 119 QKVTLMLLDQNNREHV--IDAFRPD--VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLT 190 (192)
T ss_dssp CCEEEEECCTTSSCCE--EEEECCC--TTSGGGSCCSSSBCCCEEEEEEEETHHHHSSCSSCBTTEEEEEEEECCT
T ss_pred EEEEEEEECCCCCcee--eEeeccC--CchhhhcCCccCCCCCcChhheeEHHHhhhccCCEeCCEEEEEEEEEec
Confidence 9999999999876321 1111000 0111221 235689999999999998 7899999999999999874
No 17
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=169.04 Aligned_cols=110 Identities=24% Similarity=0.301 Sum_probs=99.2
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCCC
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTL 255 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~~ 255 (400)
++.+.+.+.++++++.++||+|.++|++|+|||.||+++|+||++||.+++ ...|.++++++++|+.+|+|+|||.+
T Consensus 8 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~~~~f~~ll~~iYtg~~ 84 (119)
T 3b84_A 8 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGFAEIFGLLLDFFYTGHL 84 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGGHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCCHHHHHHHHHHHcCCCC
Confidence 356778999999999999999999999999999999999999999998765 56899999999999999999999999
Q ss_pred CCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcC
Q 015782 256 TEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (400)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 305 (400)
..+.+ | +.+|+.+|++|+++.|++.|+++|.+.
T Consensus 85 ~~~~~-------~----------v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSG-------N----------RDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTT-------T----------HHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred ccCHH-------H----------HHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 86655 4 999999999999999999999998653
No 18
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=99.89 E-value=1.4e-23 Score=179.33 Aligned_cols=135 Identities=20% Similarity=0.316 Sum_probs=104.5
Q ss_pred eeceEEEEEEcCccccccC-CCCC--eEeeceee--ecCeEEEEEEecCCCCCCCCCCeEEEEEEEec------CCccce
Q 015782 21 TVNGSHKFVIQGYSLAKGM-GIGK--HIASDNFT--VGGYQWAIYFYPDGKNPEDNSAYVSVFIALAN------EGTDVR 89 (400)
Q Consensus 21 ~~~~~~~w~I~nfs~~~~~-~~~~--~~~S~~f~--~gg~~W~l~lyp~g~~~~~~~~~lsl~L~~~~------~~w~v~ 89 (400)
...++|+|+|+|||.+++. ..|+ .++||+|+ +||++|+|++||+|++. ++++|||+||.+.+ .+|++.
T Consensus 16 ~~~g~~~w~I~nfS~~~~~~~~g~~~~i~S~~F~~~~gG~~W~i~~yP~G~~~-~~~~~lSlyL~l~~~~~~~~~~w~~~ 94 (168)
T 1d00_A 16 TYDGVFIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGT-GRGTHLSLFFVVMKGPNDALLRWPFN 94 (168)
T ss_dssp CSSSEEEEEEESHHHHHHHHHTTSSCCEECCCEESSTTSCEEEEEEETTCCGG-GTTTEEEEEEEEECCTTGGGSCSSCC
T ss_pred ccCCEEEEEECCHHHHHHHhhcCCCeEEECCCeecCCCCEEEEEEEEeCCCCC-CCCcEEEEEEEEecCCCCccCCCceE
Confidence 3679999999999998753 4566 39999996 79999999999999873 35799999999865 359999
Q ss_pred eEEEEEEecCCCCCccceecccccccccCCceec----ccCccccchhhhchhhhccC-CCCCCCcEEEEEEeeee
Q 015782 90 ALFELTLLDQSGKGKHKVHSHFDRSLESGPYTLK----YRGSMWGYKRFFRRAMLETS-DYLKDDCLKINCTVGVV 160 (400)
Q Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f~----~~~~~wG~~~fi~~~~L~~~-~~l~~d~l~i~~~v~i~ 160 (400)
++|+++|+||++.... . ..+... ...+.|. ..+.+|||++|+++++|+++ |||.||+++|+|+|.|.
T Consensus 95 ~~~~l~ll~q~~~~~~-~-~~~~~~--~~~~~f~~p~~~~~~~~G~~~Fi~~~~L~~~~gyl~dD~l~I~~~V~v~ 166 (168)
T 1d00_A 95 QKVTLMLLDQNNREHV-I-DAFRPD--VTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLT 166 (168)
T ss_dssp CCEEEEECCTTSSCCE-E-EEECCC--TTSGGGSCCSSSBCCCEEEEEEEETTTTTSSSSSSBTTEEEEEEEECCT
T ss_pred EEEEEEEECCCCCccc-e-eccccC--cchhhccCCCcCCCCCcCcceEeEHHHhcccCCceeCCEEEEEEEEEec
Confidence 9999999999875321 1 111000 0012232 23568999999999999875 99999999999999874
No 19
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.89 E-value=1.5e-23 Score=174.17 Aligned_cols=110 Identities=22% Similarity=0.375 Sum_probs=98.1
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCcccc--c-cceEEEcCCCHHHHHHHhhhhcc
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEE--D-KQEIIISDLEPKVFKAMLHFIYR 252 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e--~-~~~i~l~~~~~~~f~~~L~~iYt 252 (400)
++.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.+ + ...|.|+++++++|+.+|+|+|+
T Consensus 31 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYt 110 (144)
T 2ppi_A 31 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 110 (144)
T ss_dssp HHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhC
Confidence 35678899999999999999999999999999999999999999999988876 4 78999999999999999999999
Q ss_pred CCCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHH
Q 015782 253 DTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHL 302 (400)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l 302 (400)
|.+.++.+ | +.+|+.+|++|+++.|++.|+++|
T Consensus 111 g~~~i~~~-------~----------v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 111 GQIRLNED-------T----------IQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp SCCCCCTT-------T----------HHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCCCCHH-------H----------HHHHHHHHHHhCcHHHHHHHHHHh
Confidence 99976655 4 999999999999999999999876
No 20
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.89 E-value=5e-23 Score=164.71 Aligned_cols=107 Identities=21% Similarity=0.309 Sum_probs=97.9
Q ss_pred CcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEc--CCCHHHHHHHhhhhccCC
Q 015782 177 SDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIIS--DLEPKVFKAMLHFIYRDT 254 (400)
Q Consensus 177 ~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~--~~~~~~f~~~L~~iYt~~ 254 (400)
+.+.+++.++++++.++||+|.++|+.|+|||.||+++|+||++||.++ +...|.|+ ++++++|+.+|+|+|+|.
T Consensus 7 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~~~~f~~ll~~~Yt~~ 83 (116)
T 2vpk_A 7 EHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVKADGFQKLLEFIYTGT 83 (116)
T ss_dssp HHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCCHHHHHHHHHHHcCCC
Confidence 4677899999999999999999999999999999999999999999876 34567777 999999999999999999
Q ss_pred CCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHh
Q 015782 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLC 303 (400)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 303 (400)
+.++.+ | +.+|+.+|++|+++.|++.|+++|.
T Consensus 84 ~~~~~~-------~----------v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 84 LNLDSW-------N----------VKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCCCTT-------T----------HHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cccCHH-------H----------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 986655 4 9999999999999999999999985
No 21
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.89 E-value=2e-23 Score=171.54 Aligned_cols=113 Identities=21% Similarity=0.271 Sum_probs=97.2
Q ss_pred CcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCCCC
Q 015782 177 SDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTLT 256 (400)
Q Consensus 177 ~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~~~ 256 (400)
+.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++ ...|.|+++++++|+.+|+|+|+|.+.
T Consensus 10 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~~~~f~~lL~fiYtg~~~ 86 (135)
T 2yy9_A 10 VRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGFAEIFGLLLDFFYTGHLA 86 (135)
T ss_dssp HHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGGHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCCHHHHHHHHHHHhCCCCC
Confidence 46778999999999999999999999999999999999999999998766 567999999999999999999999997
Q ss_pred CCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCCCHH
Q 015782 257 EDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVN 309 (400)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~ 309 (400)
+..+ | +.+|+.+|++|+++.|++.|+++|.+.+...
T Consensus 87 i~~~-------~----------v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 87 LTSG-------N----------RDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCTT-------T----------HHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCHH-------H----------HHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 6655 4 9999999999999999999999998876543
No 22
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.89 E-value=3.3e-23 Score=166.99 Aligned_cols=109 Identities=26% Similarity=0.355 Sum_probs=100.2
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCCC
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTL 255 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~~ 255 (400)
++.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.++ ..+|.++++++++|+.+|+|+|+|.+
T Consensus 12 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~~~~f~~ll~~~Ytg~~ 87 (121)
T 1buo_A 12 PTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLSPKTFQQILEYAYTATL 87 (121)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCCHHHHHHHHHhhcCCCc
Confidence 45678899999999999999999999999999999999999999999764 46799999999999999999999999
Q ss_pred CCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcC
Q 015782 256 TEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (400)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 305 (400)
..+.+ | +.+|+.+|++|+++.|++.|+++|.+.
T Consensus 88 ~~~~~-------~----------~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 88 QAKAE-------D----------LDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCGG-------G----------HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCHH-------H----------HHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 87655 4 999999999999999999999999753
No 23
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=99.89 E-value=2.3e-23 Score=186.03 Aligned_cols=137 Identities=23% Similarity=0.343 Sum_probs=106.7
Q ss_pred eeceEEEEEEcCcccccc-CCCC--CeEeeceeeec--CeEEEEEEecCCCCCCCCCCeEEEEEEEecC------Cccce
Q 015782 21 TVNGSHKFVIQGYSLAKG-MGIG--KHIASDNFTVG--GYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVR 89 (400)
Q Consensus 21 ~~~~~~~w~I~nfs~~~~-~~~~--~~~~S~~f~~g--g~~W~l~lyp~g~~~~~~~~~lsl~L~~~~~------~w~v~ 89 (400)
+..|+|+|+|.|||.+++ ++.| ..++|++|++| ||+|+|++||||++. +.++|+|+||.+.++ +|++.
T Consensus 73 ~~~g~~~wkI~nfS~~~~~~~~g~~~~i~S~~F~vg~~Gy~w~i~~yPnG~~~-~~~~~lSlyL~l~~~~~d~~l~Wp~~ 151 (228)
T 1flk_A 73 SYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGM-GKGTHLSLFFVIMRGEYDALLPWPFK 151 (228)
T ss_dssp CSSSEEEEEEECHHHHHHHHHTTSCCCEECCCEESSTTSCEECEEEETTCCGG-GTTTEEEEEECCBCCTTTTSSCSSCC
T ss_pred CcCcEEEEEECCHHHHHHHhhcCCCeeEECceEEeCCCCcEEEEEEEcCCCCC-CCCCEEEEEEEEecCCccccCCCcEE
Confidence 467999999999998874 3444 48999999999 999999999999873 467999999987642 59999
Q ss_pred eEEEEEEecCCCCCccceecccccccccCCcee----cccCccccchhhhchhhhccCCCCCCCcEEEEEEeeeee
Q 015782 90 ALFELTLLDQSGKGKHKVHSHFDRSLESGPYTL----KYRGSMWGYKRFFRRAMLETSDYLKDDCLKINCTVGVVV 161 (400)
Q Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~f----~~~~~~wG~~~fi~~~~L~~~~~l~~d~l~i~~~v~i~~ 161 (400)
++|+|+|+||.+...+.... +.... ....| ...+.+|||+.|+++++|+++|||+||+++|+|+|.+..
T Consensus 152 a~~~l~lldq~~~~~~~~~~-~~~~~--~~~~F~rp~~~~~~~wG~~~Fi~~~~L~~~gyL~dD~l~I~~~V~v~~ 224 (228)
T 1flk_A 152 QKVTLMLMDQGSSRRHLGDA-FKPDP--NSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSD 224 (228)
T ss_dssp CCEEEEECCCSSSCCCEEEE-ECCCT--TCTTSSSCSSSBCCCCSEEEEEEHHHHSSSTTCCSSEEEEEEECCCTT
T ss_pred EEEEEEEEcCCCCccceeee-ecCCC--ccccccCCccCCCCCcCHHHeeEHHHHccCCCccCCEEEEEEEEEccc
Confidence 99999999998765432111 10000 01112 234568999999999999889999999999999998743
No 24
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.87 E-value=1.6e-23 Score=169.98 Aligned_cols=109 Identities=21% Similarity=0.294 Sum_probs=99.5
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcC-CCHHHHHHHhhhhccCC
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISD-LEPKVFKAMLHFIYRDT 254 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~-~~~~~f~~~L~~iYt~~ 254 (400)
.+.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.+ ...|.+++ +++++|+.+|+|+|+|.
T Consensus 16 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~~~~~f~~~l~~iYtg~ 94 (125)
T 3ohu_A 16 CTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEVTARGFGPLLQFAYTAK 94 (125)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTCCHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCCCHHHHHHHHHhHcCCc
Confidence 45678899999999999999999999999999999999999999999988766 67899998 99999999999999999
Q ss_pred CCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHH
Q 015782 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHL 302 (400)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l 302 (400)
+.++.+ + +.+|+.+|++|+++.|++.|+++|
T Consensus 95 ~~~~~~-------~----------v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 95 LLLSRE-------N----------IREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp EEECTT-------T----------HHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred eEECHH-------H----------HHHHHHHHHHhCCHHHHHHHHHhC
Confidence 876554 4 999999999999999999998753
No 25
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.87 E-value=6.5e-23 Score=164.73 Aligned_cols=107 Identities=24% Similarity=0.317 Sum_probs=97.4
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCCC
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTL 255 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~~ 255 (400)
++.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||.+
T Consensus 11 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~~~~f~~ll~~~Ytg~~ 86 (119)
T 2q81_A 11 SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISNAAGLGQVLEFMYTAKL 86 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHHHHHHHHcCCCC
Confidence 45678899999999999999999999999999999999999999999753 45677889999999999999999999
Q ss_pred CCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHh
Q 015782 256 TEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLC 303 (400)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 303 (400)
..+.+ | +.+|+.+|++|+++.|++.|+++|.
T Consensus 87 ~i~~~-------~----------~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPE-------N----------VDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCTT-------T----------HHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ccCHH-------H----------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 86655 4 9999999999999999999999984
No 26
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.87 E-value=1.9e-23 Score=169.18 Aligned_cols=112 Identities=21% Similarity=0.340 Sum_probs=98.6
Q ss_pred CCCCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEE-cCCCHHHHHHHhhhhcc
Q 015782 174 VPESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIII-SDLEPKVFKAMLHFIYR 252 (400)
Q Consensus 174 ~~~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l-~~~~~~~f~~~L~~iYt 252 (400)
.+++.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.+++.++ ..|.+ .++++++|+.+|+|+|+
T Consensus 11 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~-~~i~l~~~v~~~~f~~lL~~iYt 89 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADGE-LNITLPEEVTVKGFEPLIQFAYT 89 (124)
T ss_dssp SHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC---C-EEEECCTTSCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCCC-ceEeecCCcCHHHHHHHHHHhcC
Confidence 34567889999999999999999999999999999999999999999999887664 56888 49999999999999999
Q ss_pred CCCCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHh
Q 015782 253 DTLTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLC 303 (400)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~ 303 (400)
|.+.+..+ | +.+|+.+|++|+++.|++.|+++|.
T Consensus 90 g~~~i~~~-------~----------v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 90 AKLILSKE-------N----------VDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp SEEEEETT-------T----------HHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred CCcccCHH-------H----------HHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 99876544 4 9999999999999999999998863
No 27
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.86 E-value=9.7e-23 Score=166.16 Aligned_cols=110 Identities=23% Similarity=0.310 Sum_probs=93.6
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEc-CCCHHHHHHHhhhhccCC
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIIS-DLEPKVFKAMLHFIYRDT 254 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~-~~~~~~f~~~L~~iYt~~ 254 (400)
.+.+.+.+.++++++.++||+|.++|+.|+|||.||+++|+||++||.++ ....|.|+ ++++++|+.+|+|+|+|.
T Consensus 17 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~~~~f~~ll~~iYtg~ 93 (129)
T 3ga1_A 17 GNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQPQSFQQILSFCYTGR 93 (129)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCCHHHHHHHHHHHHHSE
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCCHHHHHHHHHHHhCCc
Confidence 35577889999999999999999999999999999999999999999765 46789996 999999999999999999
Q ss_pred CCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcC
Q 015782 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD 305 (400)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 305 (400)
+.++.+ | +.+|+.+|++|+++.|++.|+++|.+.
T Consensus 94 ~~i~~~-------~----------~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 94 LSMNVG-------D----------QDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp EECCTT-------T----------HHHHHHHHHHTTBTTSSCC--------
T ss_pred cccCHH-------H----------HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 876655 4 999999999999999999999999764
No 28
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.83 E-value=5.1e-21 Score=153.27 Aligned_cols=103 Identities=22% Similarity=0.295 Sum_probs=89.4
Q ss_pred CCCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCC
Q 015782 175 PESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDT 254 (400)
Q Consensus 175 ~~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~ 254 (400)
....+.+.+. ..++.++||+|.++|+.|+|||.||+++|+||++ ....|.++++++++|+.+|+|+|||.
T Consensus 15 ~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~~~~f~~ll~fiYtg~ 84 (119)
T 3m5b_A 15 GSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGISPSTFAQLLNFVYGES 84 (119)
T ss_dssp TTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCCHHHHHHHHHHHTTCC
T ss_pred chHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 3456666665 4678999999999999999999999999999975 24678999999999999999999999
Q ss_pred CCCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhc
Q 015782 255 LTEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCK 304 (400)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 304 (400)
+.++.+ | +.+|+.+|++|+++.|++.|++++..
T Consensus 85 ~~i~~~-------~----------v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 85 VELQPG-------E----------LRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EEECGG-------G----------HHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCcCHH-------H----------HHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 976655 4 99999999999999999999998754
No 29
>2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens}
Probab=99.83 E-value=2.2e-20 Score=187.64 Aligned_cols=128 Identities=14% Similarity=0.228 Sum_probs=102.4
Q ss_pred eeceEEEEEEcCccccccCCCCCeEeeceeeecCeEEEEEEecCCCCCCCCCCeEEEEEEEec----CCccceeEEEEEE
Q 015782 21 TVNGSHKFVIQGYSLAKGMGIGKHIASDNFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALAN----EGTDVRALFELTL 96 (400)
Q Consensus 21 ~~~~~~~w~I~nfs~~~~~~~~~~~~S~~f~~gg~~W~l~lyp~g~~~~~~~~~lsl~L~~~~----~~w~v~~~~~~~l 96 (400)
...++|+|+|.|||.+++ .++|++|.+||++|+|.+||+|+...++++|||+||.|.+ .+|.+.|+|+++|
T Consensus 28 ~~~~~~~w~I~nfS~~~~-----~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~~~~~~w~v~a~f~l~l 102 (522)
T 2f1z_A 28 RSEATFQFTVERFSRLSE-----SVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAESDSTSWSCHAQAVLKI 102 (522)
T ss_dssp CSEEEEEEEESSCTTCCS-----CEECCCEEETTEEEEEEECBC--------CBBCEEEEESTTCCCSSCBEEEEEEEEE
T ss_pred cCCcEEEEEECChhhcCC-----ceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCCCCCCCceEEEEEEEEE
Confidence 458999999999999973 7999999999999999999999753335789999999964 4699999999999
Q ss_pred ecCCCCCccceecccccccccCCceecccCccccchhhhchhhh--ccCCCCCCCcEEEEEEeeeee
Q 015782 97 LDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAML--ETSDYLKDDCLKINCTVGVVV 161 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~wG~~~fi~~~~L--~~~~~l~~d~l~i~~~v~i~~ 161 (400)
+|+.+...+... ...+.|...+.+|||.+|++|++| +.+||+.||+++|+|.|.+..
T Consensus 103 ~n~~~~~~~~~~--------~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v~~ 161 (522)
T 2f1z_A 103 INYRDDEKSFSR--------RISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA 161 (522)
T ss_dssp CCTTCGGGCEEE--------ECCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEECC
T ss_pred EcCCCCccceec--------cceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeeccc
Confidence 998765432211 134677766788999999999999 678999999999999999853
No 30
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.83 E-value=1.9e-20 Score=149.48 Aligned_cols=100 Identities=22% Similarity=0.318 Sum_probs=90.4
Q ss_pred CCcHHHHHHHhhhCCCCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCCC
Q 015782 176 ESDIGAHFGMLLDNAESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTL 255 (400)
Q Consensus 176 ~~~~~~~l~~l~~~~~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~~ 255 (400)
++.+.+.+.+++.++.++||+|.++|+.|+|||.||+++|+||++||.++ ...|.++++++++|+.+|+|+|||.+
T Consensus 15 ~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~~~~f~~~l~~~Ytg~~ 90 (116)
T 3fkc_A 15 SGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIRAEIFAEILNYIYSSKI 90 (116)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSCHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCCHHHHHHHHHhhcCCCc
Confidence 45677889999999999999999999999999999999999999999865 56899999999999999999999998
Q ss_pred -CCCcccCcCCCCCCCCCCchHHHHHHHHHHHhhhChHhHHH
Q 015782 256 -TEDVDVDVATPSSSCMSSVSDTLTAKLLAAADRYGLERLRL 296 (400)
Q Consensus 256 -~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~A~~~~~~~L~~ 296 (400)
....+ + +.+|+.+|++|+++.|++
T Consensus 91 ~~~~~~-------~----------~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 91 VRVRSD-------L----------LDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp CSCCHH-------H----------HHHHHHHHHHHTCHHHHT
T ss_pred CCCCHH-------H----------HHHHHHHHHHhCccccCc
Confidence 44443 2 999999999999999875
No 31
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.39 E-value=9.4e-13 Score=110.45 Aligned_cols=130 Identities=13% Similarity=0.210 Sum_probs=90.5
Q ss_pred EEEEe-CCeEEeeeehhhhccCHHHHHhhcC-ccc-cc-cceEEEcCCCHHHHHHHhhhhccCCCCCCccc-CcCC---C
Q 015782 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFD-ELE-ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDV-DVAT---P 266 (400)
Q Consensus 195 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~-~~~-e~-~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~-~~~~---~ 266 (400)
|+|+. +|+.|.|||.+ |..|+||++||.+ ++. |+ ...|+|++++..+++.+++|+|+..-...... ++.. .
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~ 81 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 81 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------C
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccch
Confidence 67765 79999999999 8899999999987 666 56 78999999999999999999999873221100 0000 0
Q ss_pred CC-C----CCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcC---CCHHHHHHHHHHHHHcCchH
Q 015782 267 SS-S----CMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKD---ISVNSVAKILSLADEHHATE 325 (400)
Q Consensus 267 ~~-~----~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~---l~~~n~~~~l~~a~~~~~~~ 325 (400)
.. . ..-......+.+|+.+|++++++.|.+.|.+++... .+++.+..++.+...+...+
T Consensus 82 ~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eE 148 (159)
T 2ast_A 82 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEE 148 (159)
T ss_dssp CCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTH
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHH
Confidence 00 0 000123456999999999999999999999998544 46666666666655554433
No 32
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=99.36 E-value=2.8e-12 Score=127.79 Aligned_cols=134 Identities=24% Similarity=0.361 Sum_probs=103.3
Q ss_pred cceeceEEEEEEcCccccccCCCCCeEeeceee-ecCeEEEEEEecCCCCCCCCCCeEEEEEEEecC------Cccce-e
Q 015782 19 TETVNGSHKFVIQGYSLAKGMGIGKHIASDNFT-VGGYQWAIYFYPDGKNPEDNSAYVSVFIALANE------GTDVR-A 90 (400)
Q Consensus 19 ~~~~~~~~~w~I~nfs~~~~~~~~~~~~S~~f~-~gg~~W~l~lyp~g~~~~~~~~~lsl~L~~~~~------~w~v~-~ 90 (400)
++..+..+.|+|.||+++.+- .++.++||+|+ ..||.++|.+|+++ ..|+|+|+.+.++ .|++. -
T Consensus 401 t~G~CP~~vw~i~nfs~~l~~-~~~~~~Sp~Fys~~GY~~~v~l~~~~------~~~~~~~~~l~sG~~D~~L~WP~~~~ 473 (592)
T 4gwm_A 401 SETRCPHHIWHIRNFTQFIGS-PNGTLYSPPFYSSKGYAFQIYLNLAH------VTNAGIYFHLISGANDDQLQWPCPWQ 473 (592)
T ss_dssp ESSCCCSEEEEECSCGGGTTC-TTCEEECCCEECTTSCEEEEEEECCS------SSEEEEEEEEECCTTGGGSCSSCCSE
T ss_pred eeCCCCCCceeecCHHHhhcC-CCCceeCCCccCCCCeEEEEEEecCC------CceEEEEEEEecCCCCCCccCCCCCC
Confidence 456788999999999998763 46789999998 45999999999874 5789999999874 39994 6
Q ss_pred EEEEEEecCCCCCccceecccccccccCC--------c------------ee-----cccCccccchhhhchhhhccCCC
Q 015782 91 LFELTLLDQSGKGKHKVHSHFDRSLESGP--------Y------------TL-----KYRGSMWGYKRFFRRAMLETSDY 145 (400)
Q Consensus 91 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~------------~f-----~~~~~~wG~~~fi~~~~L~~~~~ 145 (400)
++++.|+||+.+...+++.. +++.+.+ + .| ..++.+|||+.|++++.|.+..|
T Consensus 474 q~t~~llDQ~pd~~~rms~~--~s~ttdp~~~~~~~~~~w~~P~~~g~~~~~~~~~~~~r~~~~G~~~fish~~l~~r~f 551 (592)
T 4gwm_A 474 QATMTLLDQNPDIRQRMSNQ--RSITTDPFMTTDNGNYFWDRPSKVGTVALFSNGTQFRRGGGYGTSAFITHERLKSRDF 551 (592)
T ss_dssp EEEEEECCCCSSGGGCCCEE--EEEECCTTCBCTTSCBTTSCHHHHCEEEECTTCCEEEEEEEEEEEEEEEHHHHTSTTS
T ss_pred EEEEEEeCCCCChHhcCcee--EEEEcCCcccCcccccccCCcccccccccccCCcceeecCCcCccccccHHHHhhcCc
Confidence 89999999987665544331 1111100 0 01 12445799999999999998899
Q ss_pred CCCCcEEEEEEeeeee
Q 015782 146 LKDDCLKINCTVGVVV 161 (400)
Q Consensus 146 l~~d~l~i~~~v~i~~ 161 (400)
|+||.+.|.++|+-+.
T Consensus 552 iK~d~~~i~~~~eD~~ 567 (592)
T 4gwm_A 552 IKGDDVYILLTVEDIS 567 (592)
T ss_dssp SBTTBEEEEEEEEECG
T ss_pred ccCCeEEEEEEEEeCc
Confidence 9999999999997665
No 33
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.13 E-value=1.5e-10 Score=88.40 Aligned_cols=82 Identities=16% Similarity=0.250 Sum_probs=61.7
Q ss_pred EEEEe-CCeEEeeeehhhhccCHHHHHhhcC--ccccc-cceEEEcCCCHHHHHHHhhhhc-----c---CCCCCCcccC
Q 015782 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFD--ELEED-KQEIIISDLEPKVFKAMLHFIY-----R---DTLTEDVDVD 262 (400)
Q Consensus 195 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~--~~~e~-~~~i~l~~~~~~~f~~~L~~iY-----t---~~~~~~~~~~ 262 (400)
|+|+. +|+.|.|||.+ |..|+||++||.+ .+.|+ ...|+|++++..+++.+++|+| + +.++.- +
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~-~-- 79 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEF-P-- 79 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCC-C--
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcC-c--
Confidence 45554 78999999999 9999999999976 66777 8899999999999999999999 4 444410 1
Q ss_pred cCCCCCCCCCCchHHHHHHHHHHHhhhCh
Q 015782 263 VATPSSSCMSSVSDTLTAKLLAAADRYGL 291 (400)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~ll~~A~~~~~ 291 (400)
++.++ +.+|+.+|+++++
T Consensus 80 -i~~~~----------l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 80 -IAPEI----------ALELLMAANFLDC 97 (97)
T ss_dssp -CCGGG----------HHHHHHHHHHHTC
T ss_pred -CCHHH----------HHHHHHHHhhhCC
Confidence 22224 9999999999873
No 34
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.00 E-value=7.2e-10 Score=90.70 Aligned_cols=112 Identities=13% Similarity=0.147 Sum_probs=78.9
Q ss_pred EEEEe-CCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCCCCCCcc-cCcCCCC-CC--
Q 015782 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTLTEDVD-VDVATPS-SS-- 269 (400)
Q Consensus 195 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~-~~~~~~~-~~-- 269 (400)
|+|+. +|+.|.||+.+ |..|++|+.||.+.- ...|.|++++..+++.+++|+|...-..... +++.... ..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i 79 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDI 79 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCCHHHHHHHHHHHHHHTTCC----------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhh
Confidence 66776 78999999998 889999999996421 4579999999999999999999865221100 0000000 00
Q ss_pred -----CCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCCCHHH
Q 015782 270 -----CMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDISVNS 310 (400)
Q Consensus 270 -----~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l~~~n 310 (400)
..-......+.+|+.+|++++++.|.+.|.+++...+...+
T Consensus 80 ~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt 125 (141)
T 1fs1_B 80 PVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 125 (141)
T ss_dssp -HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCC
Confidence 00012356699999999999999999999999876554333
No 35
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.92 E-value=3.6e-10 Score=94.61 Aligned_cols=125 Identities=13% Similarity=0.222 Sum_probs=62.1
Q ss_pred EEEEe-CCeEEeeeehhhhccCHHHHHhhcCccccccceEEEcCCCHHHHHHHhhhhccCCCCCCcccCcCC---CCC--
Q 015782 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFDELEEDKQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVAT---PSS-- 268 (400)
Q Consensus 195 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~---~~~-- 268 (400)
|+|+. +|+.|.||+.+ |..|++|+.||.+.. ....|+|++++..+++.+++|+|+..-......++.. ...
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~ 82 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDD 82 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSCHHHHHHHHHC------------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccch
Confidence 66665 79999999998 789999999997542 2568999999999999999999987632100000000 000
Q ss_pred ---C--CCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhcCC---CHHHHHHHHHHHHHcC
Q 015782 269 ---S--CMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCKDI---SVNSVAKILSLADEHH 322 (400)
Q Consensus 269 ---~--~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l---~~~n~~~~l~~a~~~~ 322 (400)
. ..-......+.+|+.+|++++++.|.+.|.+++...+ +++.+..++.+...+.
T Consensus 83 i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~t 144 (160)
T 2p1m_A 83 LKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFT 144 (160)
T ss_dssp ------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCCC
T ss_pred hhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCC
Confidence 0 0001223459999999999999999999999998877 6777766666655554
No 36
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.61 E-value=3.9e-07 Score=70.55 Aligned_cols=94 Identities=16% Similarity=0.322 Sum_probs=76.3
Q ss_pred cEEEEeCCeEEeeeehhhhccC-HHHHHhhcCccc----c-ccceEEEcCCCHHHHHHHhhhhccCCCCCCcccCcCCCC
Q 015782 194 DITFDVAGEKFPAHKLVLAARS-PIFRSKFFDELE----E-DKQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPS 267 (400)
Q Consensus 194 Dv~l~v~~~~f~~hk~iLa~~S-~~F~~~f~~~~~----e-~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~ 267 (400)
-|+|.|||+.|.+.+..|+... .+|.+||.+... . ...++-+ |-++..|+.+|+|+.+|.+..+.+-
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~------ 79 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDL------ 79 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTS------
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCC------
Confidence 4778999999999999998775 588999876421 1 1455666 7899999999999999998765441
Q ss_pred CCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhc
Q 015782 268 SSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCK 304 (400)
Q Consensus 268 ~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 304 (400)
. ...+++-|++|+++.|+..|++.|.+
T Consensus 80 ~----------~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 80 A----------EEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp C----------HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred C----------HHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 1 57899999999999999999998864
No 37
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.37 E-value=7.6e-07 Score=67.42 Aligned_cols=84 Identities=14% Similarity=0.180 Sum_probs=60.6
Q ss_pred EEEEe-CCeEEeeeehhhhccCHHHHHhhcC--ccccc-cceEEEcCCCHHHHHHHhhhhccCCC------CCCcccCcC
Q 015782 195 ITFDV-AGEKFPAHKLVLAARSPIFRSKFFD--ELEED-KQEIIISDLEPKVFKAMLHFIYRDTL------TEDVDVDVA 264 (400)
Q Consensus 195 v~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~--~~~e~-~~~i~l~~~~~~~f~~~L~~iYt~~~------~~~~~~~~~ 264 (400)
|+|+. +|+.|.+++.+ |..|.+++.|+.+ .+.|+ ...|+|++++...++.+++|+|...- .+..-. +
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~--v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP--I 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCC--C
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcc--c
Confidence 55665 79999999997 8899999999974 33455 68999999999999999999976430 000000 2
Q ss_pred CCCCCCCCCchHHHHHHHHHHHhhhCh
Q 015782 265 TPSSSCMSSVSDTLTAKLLAAADRYGL 291 (400)
Q Consensus 265 ~~~~~~~~~~~~~~~~~ll~~A~~~~~ 291 (400)
..+. +.+|+.+|+++++
T Consensus 80 d~~~----------l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEI----------ALELLMAANFLDC 96 (96)
T ss_dssp CTTT----------HHHHHHHHHHHTC
T ss_pred CHHH----------HHHHHHHHHHhCc
Confidence 2223 9999999999875
No 38
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.36 E-value=8.4e-07 Score=67.55 Aligned_cols=91 Identities=15% Similarity=0.270 Sum_probs=66.3
Q ss_pred cEEEEe-CCeEEeeeehhhhccCHHHHHhhcCccccc-cceEEEcCCCHHHHHHHhhhhccCCCCCCc--ccCcCCCCCC
Q 015782 194 DITFDV-AGEKFPAHKLVLAARSPIFRSKFFDELEED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDV--DVDVATPSSS 269 (400)
Q Consensus 194 Dv~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~~~~e~-~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~--~~~~~~~~~~ 269 (400)
-|+|+. +|+.|.+++.+ |..|.+++.|+.+++ +. ...|+|++++...++.+++|+|...-.... ..+.+. ..
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~--~w 80 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIP--EF 80 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCC--CC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCC--Cc
Confidence 366665 89999999997 889999999998765 54 688999999999999999999864310000 000000 00
Q ss_pred CCCCchHHHHHHHHHHHhhhCh
Q 015782 270 CMSSVSDTLTAKLLAAADRYGL 291 (400)
Q Consensus 270 ~~~~~~~~~~~~ll~~A~~~~~ 291 (400)
.....++.+|+.+|+++++
T Consensus 81 ---~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 81 ---EIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp ---CCCHHHHHHHHHHHHHHCC
T ss_pred ---cCCHHHHHHHHHHHHHhCc
Confidence 1235679999999999875
No 39
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.32 E-value=3.7e-06 Score=70.62 Aligned_cols=127 Identities=13% Similarity=0.227 Sum_probs=84.0
Q ss_pred cEEEEe-CCeEEeeeehhhhccCHHHHHhhcCcccc----c-cceEEEcCCCHHHHHHHhhhhccCCCCCCcc----cCc
Q 015782 194 DITFDV-AGEKFPAHKLVLAARSPIFRSKFFDELEE----D-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVD----VDV 263 (400)
Q Consensus 194 Dv~l~v-~~~~f~~hk~iLa~~S~~F~~~f~~~~~e----~-~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~----~~~ 263 (400)
-|+|+. +|+.|.|++.+ +.+|.+++.|+.....+ . ...|.|++++..+++.+++|++...-..... ..+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~ 86 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSR 86 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-------
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccccccc
Confidence 466665 68999999998 77899999999653321 2 4789999999999999999997654321100 000
Q ss_pred CCCCCC----CCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHh---cCCCHHHHHHHHHHHHHc
Q 015782 264 ATPSSS----CMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLC---KDISVNSVAKILSLADEH 321 (400)
Q Consensus 264 ~~~~~~----~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~---~~l~~~n~~~~l~~a~~~ 321 (400)
.+..-. ..-......+.+|+.+|++++++.|.+.|.+.+. +..+++-+..++.+...+
T Consensus 87 ~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ikgktpeeiR~~f~I~nd~ 151 (169)
T 3v7d_A 87 KSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDF 151 (169)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCHHHHHHHHTCCCCC
T ss_pred ccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCC
Confidence 000000 0001235679999999999999999999999874 444666655555544433
No 40
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.10 E-value=2.1e-06 Score=66.26 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=59.6
Q ss_pred hcCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhHHHHHcccchhHHHhhChHHHHHHHHHhhcccccCCCCCCcchhh
Q 015782 303 CKDISVNSVAKILSLADEHHATELKAVCLRFAAENLAAVMRSDGFEYLKENCPSLQSELLKTVAGCEEDCSSGGKSRSVW 382 (400)
Q Consensus 303 ~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~~~v~~~~~f~~l~~~~p~l~~el~~~~~~~~~~~~~~~~~~~~~ 382 (400)
.+.++++||+.++.+|+.|+++.|++.|.+||..||.++.++++|.+|+. +.+.+++.. + ...+..||
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~---~~L~~lL~s----d-----v~~E~~vf 72 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPH---RLLTDIISD----G-----VPCSQNPT 72 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCH---HHHHHHHHT----C-----EETTSCHH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCH---HHHHHHHcC----C-----CCCHHHHH
Confidence 45789999999999999999999999999999999999999999999883 455555554 2 22334566
Q ss_pred hhhccCC
Q 015782 383 AQLSDGG 389 (400)
Q Consensus 383 ~~~~~~~ 389 (400)
..+-.+.
T Consensus 73 ~av~~Wv 79 (105)
T 2eqx_A 73 EAIEAWI 79 (105)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655554
No 41
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.87 E-value=1.9e-05 Score=61.35 Aligned_cols=90 Identities=12% Similarity=0.180 Sum_probs=62.0
Q ss_pred cEEEE-eCCeEEeeeehhhhccCHHHHHhhcC--ccccc-cceEEEcCCCHHHHHHHhhhhccCCCC-CCcccCcCCCCC
Q 015782 194 DITFD-VAGEKFPAHKLVLAARSPIFRSKFFD--ELEED-KQEIIISDLEPKVFKAMLHFIYRDTLT-EDVDVDVATPSS 268 (400)
Q Consensus 194 Dv~l~-v~~~~f~~hk~iLa~~S~~F~~~f~~--~~~e~-~~~i~l~~~~~~~f~~~L~~iYt~~~~-~~~~~~~~~~~~ 268 (400)
-|+|+ .+|+.|.+++.+ |..|..++.|+.+ .+.|. ...|+|++++..+++.+++|++...-. ....+ +. .
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~--i~--~ 92 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTE--IP--E 92 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSC--CC--C
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCC--CC--C
Confidence 46666 479999999994 6799999999974 33455 678999999999999999999653310 00000 00 0
Q ss_pred CCCCCchHHHHHHHHHHHhhhCh
Q 015782 269 SCMSSVSDTLTAKLLAAADRYGL 291 (400)
Q Consensus 269 ~~~~~~~~~~~~~ll~~A~~~~~ 291 (400)
+ .....++.+|+.+|+++++
T Consensus 93 w---~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 93 F---PIAPEIALELLMAANFLDC 112 (112)
T ss_dssp C---CCCHHHHHHHHHHHHHHTC
T ss_pred c---ccCHHHHHHHHHHHHHhCc
Confidence 0 1235679999999999875
No 42
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.76 E-value=6.7e-05 Score=63.95 Aligned_cols=94 Identities=16% Similarity=0.319 Sum_probs=74.9
Q ss_pred cEEEEeCCeEEeeeehhhhccC-HHHHHhhcCcc--cc---ccceEEEcCCCHHHHHHHhhhhccCCCCCCcccCcCCCC
Q 015782 194 DITFDVAGEKFPAHKLVLAARS-PIFRSKFFDEL--EE---DKQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPS 267 (400)
Q Consensus 194 Dv~l~v~~~~f~~hk~iLa~~S-~~F~~~f~~~~--~e---~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~ 267 (400)
=|+|.|||..|...+..|.... .+|.+||.+.. .. ...++-+ |-++..|+.+|+|+.+|.+..+.+-
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~------ 85 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDL------ 85 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTS------
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCC------
Confidence 4678899999999999998764 48899987642 11 1455655 6899999999999999998765541
Q ss_pred CCCCCCchHHHHHHHHHHHhhhChHhHHHHHHHHHhc
Q 015782 268 SSCMSSVSDTLTAKLLAAADRYGLERLRLMCGSHLCK 304 (400)
Q Consensus 268 ~~~~~~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 304 (400)
. ...++.-|++|+++.|.+.|++.|.+
T Consensus 86 ~----------~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 86 A----------EEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp C----------HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred C----------HHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 1 46799999999999999999998864
No 43
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.87 E-value=0.00068 Score=52.73 Aligned_cols=95 Identities=17% Similarity=0.232 Sum_probs=69.0
Q ss_pred cEEEEeCCeEEeeeehhhhccC-HHHHHhhcCccc-cc-cceEEEcCCCHHHHHHHhhhhccCCCCCCcccCcCCCCCCC
Q 015782 194 DITFDVAGEKFPAHKLVLAARS-PIFRSKFFDELE-ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPSSSC 270 (400)
Q Consensus 194 Dv~l~v~~~~f~~hk~iLa~~S-~~F~~~f~~~~~-e~-~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~~ 270 (400)
=|+|.|||..|...+..|.... ..+.+|+.+... .. ..++-+ |-++..|+.+|+|+.+|.+..+.+. .
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~------~-- 76 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDV------C-- 76 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSS------C--
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcc------c--
Confidence 4788999999999999998763 356667654321 12 566666 6899999999999999998765441 1
Q ss_pred CCCchHHHHHHHHHHHhhhChHhHH--HHHHHHHhcC
Q 015782 271 MSSVSDTLTAKLLAAADRYGLERLR--LMCGSHLCKD 305 (400)
Q Consensus 271 ~~~~~~~~~~~ll~~A~~~~~~~L~--~~c~~~l~~~ 305 (400)
...++.-|++|+++... .-|...+.+.
T Consensus 77 --------~~~~~~Ea~fy~i~~~~l~~CC~~~~~~~ 105 (115)
T 3kvt_A 77 --------GPLFEEELEFWGLDSNQVEPCCWMTYTAH 105 (115)
T ss_dssp --------HHHHHHHHHHHTCCGGGBCGGGSHHHHSC
T ss_pred --------HHHHHHHHHHhCCChHHHHHHHHHHHHhc
Confidence 67899999999997643 2355555443
No 44
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=96.49 E-value=0.0038 Score=47.13 Aligned_cols=84 Identities=18% Similarity=0.244 Sum_probs=60.4
Q ss_pred EEEEeCCeEEeeeehhhhccC-HHHHHhhcCc-cccc-cceEEEcCCCHHHHHHHhhhhcc-CCCCCCcccCcCCCCCCC
Q 015782 195 ITFDVAGEKFPAHKLVLAARS-PIFRSKFFDE-LEED-KQEIIISDLEPKVFKAMLHFIYR-DTLTEDVDVDVATPSSSC 270 (400)
Q Consensus 195 v~l~v~~~~f~~hk~iLa~~S-~~F~~~f~~~-~~e~-~~~i~l~~~~~~~f~~~L~~iYt-~~~~~~~~~~~~~~~~~~ 270 (400)
|+|.|||..|...+..|+..- ..+.+|+... .... ..++-+ |-++..|+.+|.|+.+ |.+..+... .
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~------~-- 73 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNV------P-- 73 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTS------C--
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCC------C--
Confidence 678999999999999997542 2333343221 1112 556666 7799999999999998 887655431 1
Q ss_pred CCCchHHHHHHHHHHHhhhChHhHH
Q 015782 271 MSSVSDTLTAKLLAAADRYGLERLR 295 (400)
Q Consensus 271 ~~~~~~~~~~~ll~~A~~~~~~~L~ 295 (400)
+..++.-|++|+++.+.
T Consensus 74 --------~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 74 --------LDVFSEEIKFYELGENA 90 (100)
T ss_dssp --------HHHHHHHHHHTTCCHHH
T ss_pred --------HHHHHHHHHHcCCCHHH
Confidence 78899999999997743
No 45
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=96.43 E-value=0.0068 Score=47.66 Aligned_cols=90 Identities=18% Similarity=0.268 Sum_probs=64.3
Q ss_pred CcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccc----cc-cceEEEcCCCHHHHHHHhhhhccCCCCCCcccCcCCCC
Q 015782 193 SDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELE----ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPS 267 (400)
Q Consensus 193 sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~----e~-~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~ 267 (400)
.-|+|.|||..|.+.+..|.... ..+|..... .. ..++-+ |-++..|+.+|+|+.+|.+....+ +
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p---~S~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~---~--- 82 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRY---E--- 82 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTST---TSSTTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTT---S---
T ss_pred CEEEEEeCCEEEEEeHHHHhcCC---CceecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCC---c---
Confidence 45788999999999999997643 223322111 11 456665 679999999999999999875544 1
Q ss_pred CCCCCCchHHHHHHHHHHHhhhChHhH--HHHHHHHH
Q 015782 268 SSCMSSVSDTLTAKLLAAADRYGLERL--RLMCGSHL 302 (400)
Q Consensus 268 ~~~~~~~~~~~~~~ll~~A~~~~~~~L--~~~c~~~l 302 (400)
. +..++.-|++|+++.+ ..-|...+
T Consensus 83 ~----------~~~l~~Ea~fy~i~~l~l~~cC~~~~ 109 (124)
T 1s1g_A 83 C----------ISAYDDELAFYGILPEIIGDCCYEEY 109 (124)
T ss_dssp C----------HHHHHHHHHHTTCCGGGBCHHHHHHH
T ss_pred C----------HHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 1 7889999999999886 33444443
No 46
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=96.04 E-value=0.013 Score=46.99 Aligned_cols=84 Identities=18% Similarity=0.279 Sum_probs=62.0
Q ss_pred CCCcEEEEeCCeEEeeeehhhhccCHHHHHhhcCccc----cc-cceEEEcCCCHHHHHHHhhhhccCCCCCCcccCcCC
Q 015782 191 ESSDITFDVAGEKFPAHKLVLAARSPIFRSKFFDELE----ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVAT 265 (400)
Q Consensus 191 ~~sDv~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~----e~-~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~ 265 (400)
...-|+|.|||..|...+..|.... ..||..... .. ..++-+ |-++..|+.+|+|+.+|.+....+.
T Consensus 33 ~~~~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~---- 104 (140)
T 2nz0_B 33 QDELIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYE---- 104 (140)
T ss_dssp CCCEEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTS----
T ss_pred CCCEEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCc----
Confidence 3445788999999999999998643 233432111 11 455665 6799999999999999998755431
Q ss_pred CCCCCCCCchHHHHHHHHHHHhhhChHhH
Q 015782 266 PSSSCMSSVSDTLTAKLLAAADRYGLERL 294 (400)
Q Consensus 266 ~~~~~~~~~~~~~~~~ll~~A~~~~~~~L 294 (400)
. +..+++-|++|+++.+
T Consensus 105 --~----------~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 105 --C----------ISAYDDELAFYGILPE 121 (140)
T ss_dssp --C----------HHHHHHHHHHHTCCGG
T ss_pred --C----------HHHHHHHHHHcCCChH
Confidence 1 7889999999999886
No 47
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=95.79 E-value=0.0095 Score=45.40 Aligned_cols=80 Identities=18% Similarity=0.262 Sum_probs=59.5
Q ss_pred EEEEeCCeEEeeeehhhhccCHHHHHhhcCccc----cc-cceEEEcCCCHHHHHHHhhhhccCCCCCCcccCcCCCCCC
Q 015782 195 ITFDVAGEKFPAHKLVLAARSPIFRSKFFDELE----ED-KQEIIISDLEPKVFKAMLHFIYRDTLTEDVDVDVATPSSS 269 (400)
Q Consensus 195 v~l~v~~~~f~~hk~iLa~~S~~F~~~f~~~~~----e~-~~~i~l~~~~~~~f~~~L~~iYt~~~~~~~~~~~~~~~~~ 269 (400)
|+|.|||..|...+..|..... .||..... .. ..++-+ |-++..|+.+|+|+-+|.+..+.+. .
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~------~- 70 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHE------C- 70 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTS------C-
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCc------C-
Confidence 6899999999999999976432 23322111 11 455665 6799999999999999998755431 1
Q ss_pred CCCCchHHHHHHHHHHHhhhChHhH
Q 015782 270 CMSSVSDTLTAKLLAAADRYGLERL 294 (400)
Q Consensus 270 ~~~~~~~~~~~~ll~~A~~~~~~~L 294 (400)
+..++.-|++|+++.+
T Consensus 71 ---------~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 71 ---------ISAYDEELAFFGLIPE 86 (105)
T ss_dssp ---------HHHHHHHHHHHTCCSC
T ss_pred ---------HHHHHHHHHHcCCCHH
Confidence 7889999999999875
No 48
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.32 E-value=0.66 Score=34.92 Aligned_cols=27 Identities=15% Similarity=0.004 Sum_probs=25.7
Q ss_pred HHHHHHHHhhhChHhHHHHHHHHHhcC
Q 015782 279 TAKLLAAADRYGLERLRLMCGSHLCKD 305 (400)
Q Consensus 279 ~~~ll~~A~~~~~~~L~~~c~~~l~~~ 305 (400)
...++.+|+.|+++.|+..|.+++.++
T Consensus 13 Cl~i~~~A~~~~~~~L~~~a~~fi~~n 39 (105)
T 2eqx_A 13 CLQVMWLADRHSDPELYTAAKHCAKTH 39 (105)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999875
No 49
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=86.96 E-value=1 Score=44.42 Aligned_cols=85 Identities=16% Similarity=0.224 Sum_probs=59.3
Q ss_pred cEEEEeCCeEEeeeehhhhccCH-HHHHhhcC-ccccc-cceEEEcCCCHHHHHHHhhhhcc-CCCCCCcccCcCCCCCC
Q 015782 194 DITFDVAGEKFPAHKLVLAARSP-IFRSKFFD-ELEED-KQEIIISDLEPKVFKAMLHFIYR-DTLTEDVDVDVATPSSS 269 (400)
Q Consensus 194 Dv~l~v~~~~f~~hk~iLa~~S~-~F~~~f~~-~~~e~-~~~i~l~~~~~~~f~~~L~~iYt-~~~~~~~~~~~~~~~~~ 269 (400)
-|+|.|||..|...+..|...-. .+..++.. ..... .+++-+ |-++..|+.+|.|+.+ |.+..+.+- .
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~------~- 124 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNV------P- 124 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTS------C-
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcc------c-
Confidence 57788999999999999975321 11222211 11112 456666 7899999999999999 888655441 1
Q ss_pred CCCCchHHHHHHHHHHHhhhChHhHH
Q 015782 270 CMSSVSDTLTAKLLAAADRYGLERLR 295 (400)
Q Consensus 270 ~~~~~~~~~~~~ll~~A~~~~~~~L~ 295 (400)
...+++-|++|+++.+.
T Consensus 125 ---------~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 125 ---------LDIFSEEIRFYELGEEA 141 (514)
T ss_dssp ---------HHHHHHHHHHTTCCHHH
T ss_pred ---------HHHHHHHHHhcCCCHHH
Confidence 67888999999997643
No 50
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=83.84 E-value=0.79 Score=34.37 Aligned_cols=32 Identities=19% Similarity=0.338 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (400)
++.+++..++.+|..|+.+.|++.|.+|+.++
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 57789999999999999999999999999875
No 51
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=71.91 E-value=2.9 Score=32.18 Aligned_cols=32 Identities=9% Similarity=0.250 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (400)
++.+++..++..|..|+.+.|++.|.+|+.++
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 57789999999999999999999999998754
No 52
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=71.07 E-value=4 Score=33.15 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=26.4
Q ss_pred HHHHHHHHhhhChHhHHHHHHHHHhcCC
Q 015782 279 TAKLLAAADRYGLERLRLMCGSHLCKDI 306 (400)
Q Consensus 279 ~~~ll~~A~~~~~~~L~~~c~~~l~~~l 306 (400)
+..++.+|++|+++.|+..|.++|.+++
T Consensus 137 ~~~~~~~A~~~~~~~L~~~~~~~i~~~~ 164 (172)
T 3htm_A 137 AAEILILADLHSADQLKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 53
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=67.30 E-value=4.8 Score=30.65 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (400)
++.+++..++..|..|+.+.|++.|.+++...
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 57789999999999999999999999998753
No 54
>3v0r_A Major allergen ALT A 1; beta-barrel, cell WALL, unknown function; HET: 0FU 8AC; 1.90A {Alternaria alternata}
Probab=67.21 E-value=1.3 Score=34.33 Aligned_cols=30 Identities=20% Similarity=0.203 Sum_probs=23.1
Q ss_pred eceEEEEEEcCccccccCCCCCeEeeceeeec
Q 015782 22 VNGSHKFVIQGYSLAKGMGIGKHIASDNFTVG 53 (400)
Q Consensus 22 ~~~~~~w~I~nfs~~~~~~~~~~~~S~~f~~g 53 (400)
.+|-+.|+|.+|+..| +.|..+.|-.|.+.
T Consensus 10 ~~gd~vwkIs~F~~RK--peGty~nsvsFnI~ 39 (133)
T 3v0r_A 10 TEGDYVWKISEFYGRK--PEGTYYNSLGFNIK 39 (133)
T ss_dssp CCCTTEEEEEEEEEEE--TTSSSCSEEEEEEE
T ss_pred cCCceEEEeeeeeeEc--CCCCceeeEEEEEE
Confidence 3588999999999888 56777777667643
No 55
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=66.84 E-value=2 Score=33.73 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhHH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (400)
++.+++..++..|..|+.+.|++.|.+|+.+++.
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSV 120 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC----
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcc
Confidence 5778999999999999999999999999988764
No 56
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=66.60 E-value=4.8 Score=30.62 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAA 335 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~ 335 (400)
++.+|+..++..|..|+.+.|++.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 577899999999999999999999999974
No 57
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=65.04 E-value=5.3 Score=30.08 Aligned_cols=30 Identities=20% Similarity=0.153 Sum_probs=27.7
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAA 335 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~ 335 (400)
++.+++..++..|..|+.+.|++.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 577899999999999999999999999874
No 58
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=64.94 E-value=6.5 Score=29.74 Aligned_cols=29 Identities=28% Similarity=0.366 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFA 334 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i 334 (400)
++.+++..++..|..|+.+.|++.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 57789999999999999999999999986
No 59
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=64.00 E-value=11 Score=33.41 Aligned_cols=59 Identities=17% Similarity=0.245 Sum_probs=40.3
Q ss_pred HHHHHHHHhhhChHhHHHHHHHHHhcC------------CCHHHHHHHHHHHHH--cCchHHHHHHHHHHHHh
Q 015782 279 TAKLLAAADRYGLERLRLMCGSHLCKD------------ISVNSVAKILSLADE--HHATELKAVCLRFAAEN 337 (400)
Q Consensus 279 ~~~ll~~A~~~~~~~L~~~c~~~l~~~------------l~~~n~~~~l~~a~~--~~~~~L~~~~~~~i~~~ 337 (400)
+..++.+|+.|+++.|+..|.+++.++ ++.+.+..++.--.. .+-..+-..+++|+..+
T Consensus 144 ~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~ 216 (279)
T 3i3n_A 144 CVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRN 216 (279)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcC
Confidence 999999999999999999999998764 233333333321111 12345777888888744
No 60
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=63.64 E-value=1.8 Score=34.07 Aligned_cols=33 Identities=12% Similarity=0.308 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAENL 338 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~ 338 (400)
++.+|+..++..|..|+.+.|++.|.+|+..++
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 577899999999999999999999999998654
No 61
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=63.17 E-value=3.3 Score=31.55 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (400)
++.+|+..++..|..|+.+.|++.|.+|+.+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 57789999999999999999999999998754
No 62
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=59.11 E-value=8.2 Score=34.85 Aligned_cols=28 Identities=18% Similarity=0.188 Sum_probs=26.3
Q ss_pred HHHHHHHHhhhChHhHHHHHHHHHhcCC
Q 015782 279 TAKLLAAADRYGLERLRLMCGSHLCKDI 306 (400)
Q Consensus 279 ~~~ll~~A~~~~~~~L~~~c~~~l~~~l 306 (400)
+..++.+|++|+++.|+..|.++|.+++
T Consensus 277 ~~~~l~~A~~~~~~~L~~~~~~~i~~~~ 304 (312)
T 3hqi_A 277 AAEILILADLHSADQLKTQAVDFINYHA 304 (312)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 63
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=52.47 E-value=5.7 Score=31.45 Aligned_cols=29 Identities=24% Similarity=0.496 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFA 334 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i 334 (400)
++.+++..++..|..|+.+.|++.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 57789999999999999999999999875
No 64
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=49.70 E-value=6.8 Score=30.63 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAENL 338 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~ 338 (400)
++.+++..++..|..|+.+.|+..|.+++.+++
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 466889999999999999999999999998664
No 65
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=48.92 E-value=11 Score=28.70 Aligned_cols=31 Identities=13% Similarity=0.247 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAE 336 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~ 336 (400)
++.+|+..++..|..++.+.|++.|.+++..
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 5789999999999999999999999998763
No 66
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=39.99 E-value=39 Score=29.20 Aligned_cols=32 Identities=22% Similarity=0.423 Sum_probs=28.8
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (400)
++.+++..++..|..|+.+.|++.|.+|+..+
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~ 130 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGC 130 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhh
Confidence 57889999999999999999999999999855
No 67
>2plx_B Peptide inhibitor; helix-turn-helix, hydrolase; HET: FLC; 1.56A {Bos taurus}
Probab=39.90 E-value=26 Score=17.98 Aligned_cols=21 Identities=33% Similarity=0.555 Sum_probs=16.3
Q ss_pred HHHHHHHHcCchHHHHHHHHH
Q 015782 313 KILSLADEHHATELKAVCLRF 333 (400)
Q Consensus 313 ~~l~~a~~~~~~~L~~~~~~~ 333 (400)
.++-+|.++..++|..+|++-
T Consensus 3 kvmcyaqrhsspellrrcldn 23 (26)
T 2plx_B 3 KVMCYAQRHSSPELLRRCLDN 23 (26)
T ss_dssp HHHHHHBCCCCHHHHHHHHHH
T ss_pred eEEeehhhcCCHHHHHHHHhc
Confidence 456778888888888888764
No 68
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=38.81 E-value=4.6 Score=31.20 Aligned_cols=33 Identities=12% Similarity=0.070 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Q 015782 305 DISVNSVAKILSLADEHHATELKAVCLRFAAEN 337 (400)
Q Consensus 305 ~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~ 337 (400)
.++.+++..++..|..|+.+.|++.|.+|+.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 367889999999999999999999999998754
No 69
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=37.97 E-value=59 Score=25.92 Aligned_cols=43 Identities=12% Similarity=0.105 Sum_probs=35.3
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhHH
Q 015782 295 RLMCGSHLCKDISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (400)
Q Consensus 295 ~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (400)
.....+|+ .++.+++.+++..|...+...|.+.|-++++..++
T Consensus 85 ~~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 85 PVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp CHHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 34444555 47999999999999999999999999999987643
No 70
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=25.12 E-value=3.9 Score=31.41 Aligned_cols=30 Identities=13% Similarity=0.340 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHcCchHHHHHHHHHHH
Q 015782 306 ISVNSVAKILSLADEHHATELKAVCLRFAA 335 (400)
Q Consensus 306 l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~ 335 (400)
++.+|+..++..|..|+.+.|++.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 467899999999999999999999988763
No 71
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=21.16 E-value=2.9e+02 Score=21.27 Aligned_cols=44 Identities=11% Similarity=0.124 Sum_probs=34.7
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhHH
Q 015782 294 LRLMCGSHLCKDISVNSVAKILSLADEHHATELKAVCLRFAAENLA 339 (400)
Q Consensus 294 L~~~c~~~l~~~l~~~n~~~~l~~a~~~~~~~L~~~~~~~i~~~~~ 339 (400)
+...-.+|+ .++.+++.+++..|.-.+...|.+.|-++++..++
T Consensus 79 i~~wD~~F~--~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 79 IPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp --HHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHH--hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 333444455 37999999999999999999999999999987653
Done!